I533_00005 SM00382 ATPases associated with a variety of cellular activities I533_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain I533_00010 SM00480 DNA polymerase III beta subunit I533_00020 SM00387 Histidine kinase-like ATPases I533_00020 SM00433 TopoisomeraseII I533_00030 SM00836 DALR anticodon binding domain I533_00070 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs I533_00070 SM00474 3'-5' exonuclease I533_00070 SM00475 5'-3' exonuclease I533_00070 SM00482 DNA polymerase A domain I533_00105 SM00257 Lysin motif I533_00175 SM00481 DNA polymerase alpha chain like domain I533_00265 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain I533_00265 SM01232 I533_00265 I533_00295 SM00052 Putative diguanylate phosphodiesterase I533_00295 SM00267 diguanylate cyclase I533_00305 SM00829 Enoylreductase I533_00310 SM00450 Rhodanese Homology Domain I533_00340 SM00530 Helix-turn-helix XRE-family like proteins I533_00355 SM00052 Putative diguanylate phosphodiesterase I533_00355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I533_00355 SM00267 diguanylate cyclase I533_00370 SM00530 Helix-turn-helix XRE-family like proteins I533_00405 SM00849 Metallo-beta-lactamase superfamily I533_00430 SM00382 ATPases associated with a variety of cellular activities I533_00435 SM00382 ATPases associated with a variety of cellular activities I533_00455 SM00450 Rhodanese Homology Domain I533_00460 SM00849 Metallo-beta-lactamase superfamily I533_00480 SM00421 helix_turn_helix, Lux Regulon I533_00560 SM00382 ATPases associated with a variety of cellular activities I533_00595 SM00849 Metallo-beta-lactamase superfamily I533_00620 SM00876 Biotin and Thiamin Synthesis associated domain I533_00670 SM00267 diguanylate cyclase I533_00685 SM00072 Guanylate kinase homologues. I533_00690 SM01409 I533_00690 I533_00695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I533_00695 SM00954 Region found in RelA / SpoT proteins I533_00710 SM00487 DEAD-like helicases superfamily I533_00710 SM00490 helicase superfamily c-terminal domain I533_00740 SM00382 ATPases associated with a variety of cellular activities I533_00780 SM00052 Putative diguanylate phosphodiesterase I533_00780 SM01034 Sensors of blue-light using FAD I533_00805 SM00271 DnaJ molecular chaperone homology domain I533_00845 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_00865 SM00052 Putative diguanylate phosphodiesterase I533_00865 SM00267 diguanylate cyclase I533_00880 SM00341 Helicase and RNase D C-terminal I533_00880 SM00487 DEAD-like helicases superfamily I533_00880 SM00490 helicase superfamily c-terminal domain I533_00880 SM00956 I533_00880 I533_00885 SM00924 MgtE intracellular N domain I533_00895 SM00267 diguanylate cyclase I533_00895 SM00448 cheY-homologous receiver domain I533_00905 SM00971 Serine acetyltransferase, N-terminal I533_00945 SM00014 Acid phosphatase homologues I533_00985 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I533_01035 SM00354 helix_turn _helix lactose operon repressor I533_01095 SM00420 helix_turn_helix, Deoxyribose operon repressor I533_01095 SM01134 I533_01095 I533_01135 SM00965 Secretin and TonB N terminus short domain I533_01145 SM00028 Tetratricopeptide repeats I533_01150 SM00382 ATPases associated with a variety of cellular activities I533_01220 SM00316 Ribosomal protein S1-like RNA-binding domain I533_01250 SM00342 helix_turn_helix, arabinose operon control protein I533_01255 SM01038 Beta galactosidase small chain I533_01260 SM00448 cheY-homologous receiver domain I533_01260 SM00862 Transcriptional regulatory protein, C terminal I533_01265 SM00387 Histidine kinase-like ATPases I533_01290 SM00478 endonuclease III I533_01290 SM00525 I533_01290 I533_01310 SM00487 DEAD-like helicases superfamily I533_01325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_01325 SM00387 Histidine kinase-like ATPases I533_01325 SM00388 His Kinase A (phosphoacceptor) domain I533_01330 SM00448 cheY-homologous receiver domain I533_01330 SM00862 Transcriptional regulatory protein, C terminal I533_01505 SM00422 helix_turn_helix, mercury resistance I533_01625 SM00448 cheY-homologous receiver domain I533_01625 SM00862 Transcriptional regulatory protein, C terminal I533_01700 SM00422 helix_turn_helix, mercury resistance I533_01770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_01775 SM00138 Methyltransferase, chemotaxis proteins I533_01785 SM00448 cheY-homologous receiver domain I533_01805 SM00354 helix_turn _helix lactose operon repressor I533_01820 SM00267 diguanylate cyclase I533_01840 SM00342 helix_turn_helix, arabinose operon control protein I533_01840 SM00387 Histidine kinase-like ATPases I533_01840 SM00388 His Kinase A (phosphoacceptor) domain I533_01840 SM00448 cheY-homologous receiver domain I533_01855 SM00354 helix_turn _helix lactose operon repressor I533_01905 SM00855 Phosphoglycerate mutase family I533_01920 SM00671 Sel1-like repeats. I533_01925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I533_01925 SM00382 ATPases associated with a variety of cellular activities I533_01930 SM01403 I533_01930 I533_01950 SM01382 I533_01950 I533_01950 SM01383 I533_01950 I533_01965 SM00322 K homology RNA-binding domain I533_02015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_02015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_02040 SM00487 DEAD-like helicases superfamily I533_02040 SM00490 helicase superfamily c-terminal domain I533_02070 SM00342 helix_turn_helix, arabinose operon control protein I533_02080 SM00938 Nitrogen regulatory protein P-II I533_02100 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain I533_02135 SM00073 Histidine Phosphotransfer domain I533_02135 SM00387 Histidine kinase-like ATPases I533_02135 SM00388 His Kinase A (phosphoacceptor) domain I533_02135 SM00448 cheY-homologous receiver domain I533_02140 SM00434 DNA Topoisomerase IV I533_02150 SM00052 Putative diguanylate phosphodiesterase I533_02150 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I533_02150 SM00091 PAS domain I533_02150 SM00267 diguanylate cyclase I533_02155 SM01150 I533_02155 I533_02230 SM00965 Secretin and TonB N terminus short domain I533_02250 SM00842 Cell division protein FtsA I533_02260 SM00919 Malic enzyme, NAD binding domain I533_02260 SM01274 I533_02260 I533_02280 SM01060 I533_02280 I533_02330 SM00859 Semialdehyde dehydrogenase, NAD binding domain I533_02335 SM00851 MGS-like domain I533_02345 SM00448 cheY-homologous receiver domain I533_02345 SM00862 Transcriptional regulatory protein, C terminal I533_02350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_02350 SM00387 Histidine kinase-like ATPases I533_02350 SM00388 His Kinase A (phosphoacceptor) domain I533_02385 SM00450 Rhodanese Homology Domain I533_02425 SM00479 I533_02425 I533_02505 SM00267 diguanylate cyclase I533_02510 SM01004 Delta-aminolevulinic acid dehydratase I533_02520 SM00487 DEAD-like helicases superfamily I533_02520 SM00490 helicase superfamily c-terminal domain I533_02530 SM00357 Cold shock protein domain I533_02530 SM00382 ATPases associated with a variety of cellular activities I533_02530 SM00959 Rho termination factor, N-terminal domain I533_02540 SM00387 Histidine kinase-like ATPases I533_02540 SM00388 His Kinase A (phosphoacceptor) domain I533_02540 SM00448 cheY-homologous receiver domain I533_02550 SM01001 AIR carboxylase I533_02605 SM00788 Adenylosuccinate synthetase I533_02655 SM01005 Alanine racemase, C-terminal domain I533_02680 SM00062 Bacterial periplasmic substrate-binding proteins I533_02710 SM00670 Large family of predicted nucleotide-binding domains I533_02725 SM00530 Helix-turn-helix XRE-family like proteins I533_02855 SM00257 Lysin motif I533_02895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_02895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_02895 SM01049 I533_02895 I533_02915 SM00287 Bacterial SH3 domain homologues I533_02920 SM01118 I533_02920 I533_02930 SM00927 DNA mismatch repair enzyme MutH I533_02940 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I533_02960 SM00448 cheY-homologous receiver domain I533_02965 SM00267 diguanylate cyclase I533_02990 SM00487 DEAD-like helicases superfamily I533_02990 SM00490 helicase superfamily c-terminal domain I533_03005 SM00670 Large family of predicted nucleotide-binding domains I533_03020 SM00487 DEAD-like helicases superfamily I533_03020 SM00490 helicase superfamily c-terminal domain I533_03025 SM00028 Tetratricopeptide repeats I533_03065 SM00387 Histidine kinase-like ATPases I533_03065 SM00433 TopoisomeraseII I533_03105 SM00841 Elongation factor P, C-terminal I533_03105 SM01185 I533_03105 I533_03160 SM00014 Acid phosphatase homologues I533_03170 SM01012 I533_03170 I533_03200 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I533_03215 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I533_03215 SM00091 PAS domain I533_03215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_03230 SM00382 ATPases associated with a variety of cellular activities I533_03290 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I533_03295 SM01007 Class II Aldolase and Adducin N-terminal domain I533_03330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_03330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_03340 SM00400 zinc finger I533_03340 SM00493 I533_03340 I533_03340 SM00766 DNA primase DnaG DnaB-binding I533_03365 SM01207 I533_03365 I533_03370 SM00905 Dihydroneopterin aldolase I533_03405 SM00530 Helix-turn-helix XRE-family like proteins I533_03415 SM00387 Histidine kinase-like ATPases I533_03420 SM00448 cheY-homologous receiver domain I533_03420 SM00862 Transcriptional regulatory protein, C terminal I533_03425 SM00387 Histidine kinase-like ATPases I533_03425 SM00388 His Kinase A (phosphoacceptor) domain I533_03435 SM00710 Parallel beta-helix repeats I533_03470 SM00028 Tetratricopeptide repeats I533_03475 SM00448 cheY-homologous receiver domain I533_03475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I533_03480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I533_03480 SM00091 PAS domain I533_03480 SM00387 Histidine kinase-like ATPases I533_03480 SM00388 His Kinase A (phosphoacceptor) domain I533_03480 SM00448 cheY-homologous receiver domain I533_03500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_03500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_03515 SM00650 Ribosomal RNA adenine dimethylases I533_03535 SM00271 DnaJ molecular chaperone homology domain I533_03580 SM00954 Region found in RelA / SpoT proteins I533_03610 SM00822 I533_03610 I533_03615 SM01236 I533_03615 I533_03660 SM00387 Histidine kinase-like ATPases I533_03660 SM00388 His Kinase A (phosphoacceptor) domain I533_03665 SM00448 cheY-homologous receiver domain I533_03665 SM00862 Transcriptional regulatory protein, C terminal I533_03705 SM00116 Domain in cystathionine beta-synthase and other proteins. I533_03705 SM00924 MgtE intracellular N domain I533_03735 SM00382 ATPases associated with a variety of cellular activities I533_03765 SM00382 ATPases associated with a variety of cellular activities I533_03800 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I533_03805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I533_03835 SM00052 Putative diguanylate phosphodiesterase I533_03835 SM00267 diguanylate cyclase I533_03875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I533_03875 SM00091 PAS domain I533_03875 SM00387 Histidine kinase-like ATPases I533_03875 SM00388 His Kinase A (phosphoacceptor) domain I533_03875 SM00448 cheY-homologous receiver domain I533_03900 SM00861 Transketolase, pyrimidine binding domain I533_03905 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I533_03970 SM00382 ATPases associated with a variety of cellular activities I533_04005 SM00347 helix_turn_helix multiple antibiotic resistance protein I533_04025 SM00857 Resolvase, N terminal domain I533_04065 SM00857 Resolvase, N terminal domain I533_04070 SM01263 I533_04070 I533_04115 SM00345 helix_turn_helix gluconate operon transcriptional repressor I533_04115 SM00866 I533_04115 I533_04195 SM00850 LytTr DNA-binding domain I533_04210 SM00448 cheY-homologous receiver domain I533_04215 SM00091 PAS domain I533_04235 SM00729 Elongator protein 3, MiaB family, Radical SAM I533_04245 SM00487 DEAD-like helicases superfamily I533_04245 SM00490 helicase superfamily c-terminal domain I533_04260 SM00382 ATPases associated with a variety of cellular activities I533_04290 SM01329 I533_04290 I533_04295 SM00917 LeuA allosteric (dimerisation) domain I533_04305 SM01192 I533_04305 I533_04305 SM01193 I533_04305 I533_04315 SM00533 DNA-binding domain of DNA mismatch repair MUTS family I533_04315 SM00534 ATPase domain of DNA mismatch repair MUTS family I533_04325 SM00382 ATPases associated with a variety of cellular activities I533_04330 SM00382 ATPases associated with a variety of cellular activities I533_04355 SM00382 ATPases associated with a variety of cellular activities I533_04425 SM00382 ATPases associated with a variety of cellular activities I533_04465 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I533_04470 SM01329 I533_04470 I533_04490 SM00267 diguanylate cyclase I533_04550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I533_04595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I533_04605 SM00935 Outer membrane protein (OmpH-like) I533_04630 SM00481 DNA polymerase alpha chain like domain I533_04640 SM00977 TilS substrate C-terminal domain I533_04645 SM00267 diguanylate cyclase I533_04670 SM00062 Bacterial periplasmic substrate-binding proteins I533_04675 SM01211 I533_04675 I533_04725 SM00382 ATPases associated with a variety of cellular activities I533_04735 SM00421 helix_turn_helix, Lux Regulon I533_04770 SM00858 I533_04770 I533_04775 SM00260 Two component signalling adaptor domain I533_04775 SM00448 cheY-homologous receiver domain I533_04780 SM00138 Methyltransferase, chemotaxis proteins I533_04825 SM00047 Lysozyme subfamily 2 I533_04885 SM00822 I533_04885 I533_04905 SM00858 I533_04905 I533_04940 SM00382 ATPases associated with a variety of cellular activities I533_04945 SM00387 Histidine kinase-like ATPases I533_04945 SM00388 His Kinase A (phosphoacceptor) domain I533_04950 SM00382 ATPases associated with a variety of cellular activities I533_04950 SM00448 cheY-homologous receiver domain I533_04975 SM00382 ATPases associated with a variety of cellular activities I533_05035 SM00382 ATPases associated with a variety of cellular activities I533_05035 SM00962 SRP54-type protein, GTPase domain I533_05050 SM00448 cheY-homologous receiver domain I533_05060 SM00073 Histidine Phosphotransfer domain I533_05060 SM00260 Two component signalling adaptor domain I533_05060 SM00387 Histidine kinase-like ATPases I533_05060 SM01231 I533_05060 I533_05065 SM00448 cheY-homologous receiver domain I533_05075 SM00260 Two component signalling adaptor domain I533_05080 SM00260 Two component signalling adaptor domain I533_05100 SM01018 B12 binding domain I533_05115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_05115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_05130 SM00947 Carbonic anhydrase I533_05165 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I533_05195 SM00382 ATPases associated with a variety of cellular activities I533_05200 SM00382 ATPases associated with a variety of cellular activities I533_05220 SM00382 ATPases associated with a variety of cellular activities I533_05225 SM00091 PAS domain I533_05225 SM00382 ATPases associated with a variety of cellular activities I533_05240 SM00344 helix_turn_helix ASNC type I533_05245 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I533_05275 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I533_05290 SM00028 Tetratricopeptide repeats I533_05325 SM00028 Tetratricopeptide repeats I533_05385 SM00829 Enoylreductase I533_05400 SM00347 helix_turn_helix multiple antibiotic resistance protein I533_05465 SM00479 I533_05465 I533_05495 SM00487 DEAD-like helicases superfamily I533_05500 SM00382 ATPases associated with a variety of cellular activities I533_05525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I533_05555 SM00382 ATPases associated with a variety of cellular activities I533_05685 SM00382 ATPases associated with a variety of cellular activities I533_05705 SM00327 von Willebrand factor (vWF) type A domain I533_05720 SM00778 Zinc-binding domain of primase-helicase I533_05795 SM00530 Helix-turn-helix XRE-family like proteins I533_05805 SM00836 DALR anticodon binding domain I533_05805 SM01016 Arginyl tRNA synthetase N terminal dom I533_05885 SM00530 Helix-turn-helix XRE-family like proteins I533_05895 SM00836 DALR anticodon binding domain I533_05895 SM01016 Arginyl tRNA synthetase N terminal dom I533_05925 SM00267 diguanylate cyclase I533_05965 SM00937 I533_05965 I533_06020 SM00463 Small MutS-related domain I533_06050 SM00763 PrkA AAA domain I533_06080 SM00965 Secretin and TonB N terminus short domain I533_06095 SM00479 I533_06095 I533_06115 SM00357 Cold shock protein domain I533_06135 SM00478 endonuclease III I533_06145 SM00900 I533_06145 I533_06175 SM00487 DEAD-like helicases superfamily I533_06175 SM00490 helicase superfamily c-terminal domain I533_06255 SM00267 diguanylate cyclase I533_06280 SM00028 Tetratricopeptide repeats I533_06285 SM00327 von Willebrand factor (vWF) type A domain I533_06325 SM00052 Putative diguanylate phosphodiesterase I533_06325 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I533_06325 SM00267 diguanylate cyclase I533_06335 SM00855 Phosphoglycerate mutase family I533_06345 SM01091 Transporter associated domain I533_06355 SM00382 ATPases associated with a variety of cellular activities I533_06355 SM00962 SRP54-type protein, GTPase domain I533_06355 SM00963 SRP54-type protein, helical bundle domain I533_06410 SM00382 ATPases associated with a variety of cellular activities I533_06460 SM00830 Chorismate mutase type II I533_06465 SM00830 Chorismate mutase type II I533_06470 SM00448 cheY-homologous receiver domain I533_06485 SM00331 Sigma factor PP2C-like phosphatases I533_06485 SM00448 cheY-homologous receiver domain I533_06495 SM00052 Putative diguanylate phosphodiesterase I533_06495 SM00267 diguanylate cyclase I533_06505 SM00387 Histidine kinase-like ATPases I533_06505 SM00388 His Kinase A (phosphoacceptor) domain I533_06515 SM00382 ATPases associated with a variety of cellular activities I533_06515 SM00448 cheY-homologous receiver domain I533_06525 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I533_06550 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I533_06555 SM00382 ATPases associated with a variety of cellular activities I533_06635 SM00859 Semialdehyde dehydrogenase, NAD binding domain I533_06650 SM00267 diguanylate cyclase I533_06675 SM00116 Domain in cystathionine beta-synthase and other proteins. I533_06690 SM00267 diguanylate cyclase I533_06760 SM00729 Elongator protein 3, MiaB family, Radical SAM I533_06760 SM00876 Biotin and Thiamin Synthesis associated domain I533_06785 SM00226 Low molecular weight phosphatase family I533_06795 SM00382 ATPases associated with a variety of cellular activities I533_06815 SM00382 ATPases associated with a variety of cellular activities I533_06820 SM00729 Elongator protein 3, MiaB family, Radical SAM I533_06830 SM00028 Tetratricopeptide repeats I533_06830 SM00448 cheY-homologous receiver domain I533_06850 SM00382 ATPases associated with a variety of cellular activities I533_06865 SM00905 Dihydroneopterin aldolase I533_06875 SM00387 Histidine kinase-like ATPases I533_06880 SM00448 cheY-homologous receiver domain I533_06880 SM00862 Transcriptional regulatory protein, C terminal I533_06950 SM00363 S4 RNA-binding domain I533_06960 SM01266 I533_06960 I533_07030 SM00421 helix_turn_helix, Lux Regulon I533_07030 SM00448 cheY-homologous receiver domain I533_07035 SM00387 Histidine kinase-like ATPases I533_07035 SM00388 His Kinase A (phosphoacceptor) domain I533_07035 SM00448 cheY-homologous receiver domain I533_07050 SM00271 DnaJ molecular chaperone homology domain I533_07060 SM00052 Putative diguanylate phosphodiesterase I533_07060 SM00091 PAS domain I533_07060 SM00267 diguanylate cyclase I533_07080 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain I533_07085 SM00851 MGS-like domain I533_07085 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain I533_07120 SM00116 Domain in cystathionine beta-synthase and other proteins. I533_07120 SM01091 Transporter associated domain I533_07135 SM00729 Elongator protein 3, MiaB family, Radical SAM I533_07190 SM00903 Flavin reductase like domain I533_07235 SM00829 Enoylreductase I533_07250 SM01400 I533_07250 I533_07270 SM00937 I533_07270 I533_07320 SM00838 Elongation factor G C-terminus I533_07320 SM00889 Elongation factor G, domain IV I533_07325 SM01116 I533_07325 I533_07330 SM00219 Tyrosine kinase, catalytic domain I533_07330 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain I533_07340 SM00460 Transglutaminase/protease-like homologues I533_07370 SM00052 Putative diguanylate phosphodiesterase I533_07370 SM00267 diguanylate cyclase I533_07440 SM00347 helix_turn_helix multiple antibiotic resistance protein I533_07450 SM00864 Tubulin/FtsZ family, GTPase domain I533_07450 SM00865 Tubulin/FtsZ family, C-terminal domain I533_07460 SM00052 Putative diguanylate phosphodiesterase I533_07460 SM00091 PAS domain I533_07460 SM00267 diguanylate cyclase I533_07465 SM00052 Putative diguanylate phosphodiesterase I533_07465 SM00267 diguanylate cyclase I533_07495 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I533_07510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I533_07510 SM00091 PAS domain I533_07510 SM00267 diguanylate cyclase I533_07540 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I533_07545 SM01092 CO dehydrogenase flavoprotein C-terminal domain I533_07580 SM00448 cheY-homologous receiver domain I533_07590 SM00267 diguanylate cyclase I533_07595 SM00387 Histidine kinase-like ATPases I533_07595 SM00388 His Kinase A (phosphoacceptor) domain I533_07595 SM00448 cheY-homologous receiver domain I533_07685 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I533_07770 SM00052 Putative diguanylate phosphodiesterase I533_07770 SM00267 diguanylate cyclase I533_07770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_07890 SM00873 B3/4 domain I533_07890 SM00874 tRNA synthetase B5 domain I533_07890 SM00896 Ferredoxin-fold anticodon binding domain I533_07895 SM00411 bacterial (prokaryotic) histone like domain I533_07935 SM00487 DEAD-like helicases superfamily I533_07935 SM00490 helicase superfamily c-terminal domain I533_07935 SM00982 I533_07935 I533_07935 SM01058 CarD-like/TRCF domain I533_07955 SM00387 Histidine kinase-like ATPases I533_07960 SM00897 FIST N domain I533_07960 SM01204 I533_07960 I533_08045 SM00878 Biotin carboxylase C-terminal domain I533_08065 SM00422 helix_turn_helix, mercury resistance I533_08085 SM00062 Bacterial periplasmic substrate-binding proteins I533_08085 SM00267 diguanylate cyclase I533_08100 SM00387 Histidine kinase-like ATPases I533_08100 SM00388 His Kinase A (phosphoacceptor) domain I533_08100 SM00448 cheY-homologous receiver domain I533_08110 SM00116 Domain in cystathionine beta-synthase and other proteins. I533_08135 SM00267 diguanylate cyclase I533_08140 SM00342 helix_turn_helix, arabinose operon control protein I533_08150 SM00382 ATPases associated with a variety of cellular activities I533_08150 SM00487 DEAD-like helicases superfamily I533_08150 SM00490 helicase superfamily c-terminal domain I533_08150 SM00847 Helicase associated domain (HA2) Add an annotation I533_08165 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I533_08170 SM00829 Enoylreductase I533_08180 SM00479 I533_08180 I533_08190 SM00052 Putative diguanylate phosphodiesterase I533_08195 SM00382 ATPases associated with a variety of cellular activities I533_08210 SM00634 Bacterial Ig-like domain (group 1) I533_08225 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain I533_08225 SM00437 Bacterial DNA topoisomerase I DNA-binding domain I533_08225 SM00493 I533_08225 I533_08275 SM00587 ZnF_C4 abd HLH domain containing kinases domain I533_08280 SM00316 Ribosomal protein S1-like RNA-binding domain I533_08285 SM00363 S4 RNA-binding domain I533_08320 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. I533_08325 SM00822 I533_08325 I533_08335 SM00825 Beta-ketoacyl synthase I533_08375 SM00267 diguanylate cyclase I533_08485 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I533_08485 SM00091 PAS domain I533_08485 SM00387 Histidine kinase-like ATPases I533_08485 SM00388 His Kinase A (phosphoacceptor) domain I533_08485 SM00448 cheY-homologous receiver domain I533_08490 SM00448 cheY-homologous receiver domain I533_08490 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I533_08500 SM00316 Ribosomal protein S1-like RNA-binding domain I533_08525 SM01387 I533_08525 I533_08530 SM00363 S4 RNA-binding domain I533_08550 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I533_08560 SM00448 cheY-homologous receiver domain I533_08625 SM00729 Elongator protein 3, MiaB family, Radical SAM I533_08665 SM00382 ATPases associated with a variety of cellular activities I533_08695 SM00267 diguanylate cyclase I533_08740 SM00382 ATPases associated with a variety of cellular activities I533_08770 SM00342 helix_turn_helix, arabinose operon control protein I533_08800 SM00347 helix_turn_helix multiple antibiotic resistance protein I533_08815 SM00028 Tetratricopeptide repeats I533_08840 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I533_08870 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. I533_08875 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain I533_08905 SM00357 Cold shock protein domain I533_08915 SM00382 ATPases associated with a variety of cellular activities I533_08915 SM01086 C-terminal, D2-small domain, of ClpB protein I533_08920 SM00316 Ribosomal protein S1-like RNA-binding domain I533_08945 SM00731 SprT homologues. I533_08975 SM00870 I533_08975 I533_08980 SM00729 Elongator protein 3, MiaB family, Radical SAM I533_08995 SM00936 Penicillin-binding protein 5, C-terminal domain I533_09065 SM00267 diguanylate cyclase I533_09075 SM01103 I533_09075 I533_09085 SM00382 ATPases associated with a variety of cellular activities I533_09160 SM00507 HNH nucleases I533_09165 SM00316 Ribosomal protein S1-like RNA-binding domain I533_09165 SM00322 K homology RNA-binding domain I533_09205 SM00530 Helix-turn-helix XRE-family like proteins I533_09240 SM00382 ATPases associated with a variety of cellular activities I533_09335 SM00028 Tetratricopeptide repeats I533_09355 SM00771 ZipA, C-terminal domain (FtsZ-binding) I533_09360 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I533_09360 SM00292 breast cancer carboxy-terminal domain I533_09360 SM00532 Ligase N family I533_09370 SM00849 Metallo-beta-lactamase superfamily I533_09375 SM00382 ATPases associated with a variety of cellular activities I533_09400 SM00729 Elongator protein 3, MiaB family, Radical SAM I533_09465 SM00861 Transketolase, pyrimidine binding domain I533_09480 SM00881 CoA binding domain I533_09520 SM00642 Alpha-amylase domain I533_09525 SM00642 Alpha-amylase domain I533_09535 SM00642 Alpha-amylase domain I533_09540 SM00354 helix_turn _helix lactose operon repressor I533_09605 SM00448 cheY-homologous receiver domain I533_09660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I533_09675 SM00387 Histidine kinase-like ATPases I533_09680 SM00448 cheY-homologous receiver domain I533_09680 SM00850 LytTr DNA-binding domain I533_09710 SM00829 Enoylreductase I533_09715 SM00829 Enoylreductase I533_09720 SM00822 I533_09720 I533_09740 SM00020 Trypsin-like serine protease I533_09760 SM00422 helix_turn_helix, mercury resistance I533_09775 SM00028 Tetratricopeptide repeats I533_09775 SM00448 cheY-homologous receiver domain I533_09785 SM00450 Rhodanese Homology Domain I533_09790 SM00054 EF-hand, calcium binding motif I533_09795 SM00487 DEAD-like helicases superfamily I533_09795 SM00490 helicase superfamily c-terminal domain I533_09800 SM00882 Coenzyme A transferase I533_09805 SM00882 Coenzyme A transferase I533_09820 SM00387 Histidine kinase-like ATPases I533_09870 SM00861 Transketolase, pyrimidine binding domain I533_09885 SM00220 Serine/Threonine protein kinases, catalytic domain I533_09920 SM00945 ProQ/FINO family I533_09925 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I533_09925 SM00245 tail specific protease I533_09980 SM00981 I533_09980 I533_09990 SM00382 ATPases associated with a variety of cellular activities I533_10135 SM00100 Cyclic nucleotide-monophosphate binding domain I533_10135 SM00419 helix_turn_helix, cAMP Regulatory protein I533_10160 SM00047 Lysozyme subfamily 2 I533_10180 SM00450 Rhodanese Homology Domain I533_10190 SM01144 I533_10190 I533_10200 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I533_10200 SM00465 GIY-YIG type nucleases (URI domain) I533_10205 SM00421 helix_turn_helix, Lux Regulon I533_10205 SM00448 cheY-homologous receiver domain I533_10245 SM00487 DEAD-like helicases superfamily I533_10245 SM00490 helicase superfamily c-terminal domain I533_10260 SM00382 ATPases associated with a variety of cellular activities I533_10285 SM00422 helix_turn_helix, mercury resistance I533_10365 SM00382 ATPases associated with a variety of cellular activities I533_10375 SM00843 I533_10375 I533_10380 SM00344 helix_turn_helix ASNC type I533_10385 SM01002 Alanine dehydrogenase/PNT, C-terminal domain I533_10385 SM01003 Alanine dehydrogenase/PNT, N-terminal domain I533_10390 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family I533_10410 SM00411 bacterial (prokaryotic) histone like domain I533_10415 SM00316 Ribosomal protein S1-like RNA-binding domain I533_10435 SM00434 DNA Topoisomerase IV I533_10475 SM00052 Putative diguanylate phosphodiesterase I533_10475 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I533_10475 SM00267 diguanylate cyclase I533_10500 SM01130 I533_10500 I533_10580 SM00421 helix_turn_helix, Lux Regulon I533_10580 SM00448 cheY-homologous receiver domain I533_10610 SM00642 Alpha-amylase domain I533_10620 SM00852 Probable molybdopterin binding domain I533_10640 SM00382 ATPases associated with a variety of cellular activities I533_10690 SM00530 Helix-turn-helix XRE-family like proteins I533_10760 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. I533_10770 SM00563 Phosphate acyltransferases I533_10815 SM00342 helix_turn_helix, arabinose operon control protein I533_10850 SM00893 Electron transfer flavoprotein domain I533_10855 SM00893 Electron transfer flavoprotein domain I533_10865 SM00528 Domain in histone-like proteins of HNS family I533_10910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_10910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_10925 SM00797 Allophanate hydrolase subunit 2 I533_10930 SM00796 Allophanate hydrolase subunit 1 I533_10985 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I533_11030 SM00342 helix_turn_helix, arabinose operon control protein I533_11050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I533_11085 SM00829 Enoylreductase I533_11100 SM00855 Phosphoglycerate mutase family I533_11125 SM00729 Elongator protein 3, MiaB family, Radical SAM I533_11130 SM00382 ATPases associated with a variety of cellular activities I533_11160 SM00852 Probable molybdopterin binding domain I533_11285 SM00052 Putative diguanylate phosphodiesterase I533_11285 SM00267 diguanylate cyclase I533_11290 SM00849 Metallo-beta-lactamase superfamily I533_11325 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I533_11330 SM00450 Rhodanese Homology Domain I533_11345 SM00382 ATPases associated with a variety of cellular activities I533_11345 SM00448 cheY-homologous receiver domain I533_11355 SM00387 Histidine kinase-like ATPases I533_11355 SM00388 His Kinase A (phosphoacceptor) domain I533_11360 SM00448 cheY-homologous receiver domain I533_11365 SM00387 Histidine kinase-like ATPases I533_11365 SM00388 His Kinase A (phosphoacceptor) domain I533_11365 SM00448 cheY-homologous receiver domain I533_11435 SM00631 I533_11435 I533_11440 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I533_11455 SM01350 I533_11455 I533_11460 SM00642 Alpha-amylase domain I533_11465 SM00642 Alpha-amylase domain I533_11475 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I533_11525 SM00342 helix_turn_helix, arabinose operon control protein I533_11535 SM00893 Electron transfer flavoprotein domain I533_11540 SM00893 Electron transfer flavoprotein domain I533_11620 SM00749 bacterial OsmY and nodulation domain I533_11685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_11685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_11710 SM00052 Putative diguanylate phosphodiesterase I533_11710 SM00267 diguanylate cyclase I533_11720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I533_11725 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I533_11725 SM00387 Histidine kinase-like ATPases I533_11765 SM00849 Metallo-beta-lactamase superfamily I533_11770 SM00257 Lysin motif I533_11780 SM00840 I533_11780 I533_11800 SM00244 prohibitin homologues I533_11810 SM00642 Alpha-amylase domain I533_11820 SM00829 Enoylreductase I533_11825 SM01060 I533_11825 I533_11830 SM00829 Enoylreductase I533_11845 SM00539 Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins. I533_11905 SM00859 Semialdehyde dehydrogenase, NAD binding domain I533_11915 SM01007 Class II Aldolase and Adducin N-terminal domain I533_11920 SM00100 Cyclic nucleotide-monophosphate binding domain I533_11920 SM00419 helix_turn_helix, cAMP Regulatory protein I533_11940 SM00825 Beta-ketoacyl synthase I533_11995 SM00422 helix_turn_helix, mercury resistance I533_12000 SM00829 Enoylreductase I533_12020 SM00382 ATPases associated with a variety of cellular activities I533_12030 SM00387 Histidine kinase-like ATPases I533_12030 SM00388 His Kinase A (phosphoacceptor) domain I533_12030 SM00448 cheY-homologous receiver domain I533_12145 SM00345 helix_turn_helix gluconate operon transcriptional repressor I533_12190 SM00341 Helicase and RNase D C-terminal I533_12190 SM00474 3'-5' exonuclease I533_12220 SM00487 DEAD-like helicases superfamily I533_12220 SM00488 I533_12220 I533_12220 SM00491 I533_12220 I533_12230 SM00014 Acid phosphatase homologues I533_12245 SM00642 Alpha-amylase domain I533_12325 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_12325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_12360 SM00387 Histidine kinase-like ATPases I533_12365 SM00493 I533_12365 I533_12375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I533_12375 SM00448 cheY-homologous receiver domain I533_12375 SM00911 HWE histidine kinase I533_12385 SM00382 ATPases associated with a variety of cellular activities I533_12410 SM00862 Transcriptional regulatory protein, C terminal I533_12420 SM00091 PAS domain I533_12420 SM00267 diguanylate cyclase I533_12445 SM00028 Tetratricopeptide repeats I533_12455 SM00382 ATPases associated with a variety of cellular activities I533_12455 SM01086 C-terminal, D2-small domain, of ClpB protein I533_12465 SM00363 S4 RNA-binding domain I533_12535 SM00861 Transketolase, pyrimidine binding domain I533_12590 SM00382 ATPases associated with a variety of cellular activities I533_12600 SM00382 ATPases associated with a variety of cellular activities I533_12635 SM00358 Double-stranded RNA binding motif I533_12635 SM00535 Ribonuclease III family I533_12645 SM00838 Elongation factor G C-terminus I533_12700 SM00938 Nitrogen regulatory protein P-II I533_12785 SM00904 Riboflavin kinase I533_12830 SM00563 Phosphate acyltransferases I533_12845 SM00411 bacterial (prokaryotic) histone like domain I533_12855 SM00382 ATPases associated with a variety of cellular activities I533_12855 SM00464 Found in ATP-dependent protease La (LON) I533_12860 SM00382 ATPases associated with a variety of cellular activities I533_12860 SM00994 ClpX C4-type zinc finger I533_12860 SM01086 C-terminal, D2-small domain, of ClpB protein I533_12910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_12920 SM00116 Domain in cystathionine beta-synthase and other proteins. I533_12920 SM01240 I533_12920 I533_12940 SM00382 ATPases associated with a variety of cellular activities I533_12945 SM00564 beta-propeller repeat I533_12950 SM00028 Tetratricopeptide repeats I533_12970 SM00028 Tetratricopeptide repeats I533_12970 SM00257 Lysin motif I533_12980 SM00562 I533_12980 I533_13010 SM00382 ATPases associated with a variety of cellular activities I533_13055 SM00850 LytTr DNA-binding domain I533_13070 SM01323 I533_13070 I533_13135 SM00382 ATPases associated with a variety of cellular activities I533_13155 SM00098 Alkaline phosphatase homologues I533_13160 SM00260 Two component signalling adaptor domain I533_13160 SM00448 cheY-homologous receiver domain I533_13230 SM00028 Tetratricopeptide repeats I533_13400 SM00382 ATPases associated with a variety of cellular activities I533_13480 SM00052 Putative diguanylate phosphodiesterase I533_13480 SM00267 diguanylate cyclase I533_13495 SM00354 helix_turn _helix lactose operon repressor I533_13530 SM00967 RNA 2'-O ribose methyltransferase substrate binding I533_13605 SM00953 I533_13605 I533_13625 SM00448 cheY-homologous receiver domain I533_13625 SM00862 Transcriptional regulatory protein, C terminal I533_13630 SM00387 Histidine kinase-like ATPases I533_13630 SM00388 His Kinase A (phosphoacceptor) domain I533_13675 SM01092 CO dehydrogenase flavoprotein C-terminal domain I533_13680 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I533_13730 SM01322 I533_13730 I533_13775 SM00487 DEAD-like helicases superfamily I533_13775 SM00490 helicase superfamily c-terminal domain I533_13795 SM00028 Tetratricopeptide repeats I533_13795 SM00387 Histidine kinase-like ATPases I533_13795 SM00388 His Kinase A (phosphoacceptor) domain I533_13795 SM00448 cheY-homologous receiver domain I533_13805 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I533_13805 SM00387 Histidine kinase-like ATPases I533_13805 SM00388 His Kinase A (phosphoacceptor) domain I533_13805 SM00448 cheY-homologous receiver domain I533_13835 SM00988 UreE urease accessory protein, N-terminal domain I533_13860 SM00382 ATPases associated with a variety of cellular activities I533_13890 SM00387 Histidine kinase-like ATPases I533_13890 SM00388 His Kinase A (phosphoacceptor) domain I533_13890 SM00448 cheY-homologous receiver domain I533_13895 SM00421 helix_turn_helix, Lux Regulon I533_13895 SM00448 cheY-homologous receiver domain I533_13945 SM00487 DEAD-like helicases superfamily I533_14020 SM01011 Aminopeptidase P, N-terminal domain I533_14040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I533_14040 SM00387 Histidine kinase-like ATPases I533_14040 SM00388 His Kinase A (phosphoacceptor) domain I533_14040 SM00448 cheY-homologous receiver domain I533_14120 SM00345 helix_turn_helix gluconate operon transcriptional repressor I533_14120 SM00895 I533_14120 I533_14130 SM00644 I533_14130 I533_14185 SM00957 SecA DEAD-like domain I533_14185 SM00958 SecA preprotein cross-linking domain I533_14200 SM00864 Tubulin/FtsZ family, GTPase domain I533_14200 SM00865 Tubulin/FtsZ family, C-terminal domain I533_14205 SM00842 Cell division protein FtsA I533_14330 SM00028 Tetratricopeptide repeats I533_14330 SM00267 diguanylate cyclase I533_14340 SM00382 ATPases associated with a variety of cellular activities I533_14340 SM00448 cheY-homologous receiver domain I533_14345 SM00387 Histidine kinase-like ATPases I533_14395 SM00732 Likely ribonuclease with RNase H fold. I533_14405 SM00382 ATPases associated with a variety of cellular activities I533_14485 SM00530 Helix-turn-helix XRE-family like proteins I533_14495 SM00360 RNA recognition motif I533_14525 SM00986 Uracil DNA glycosylase superfamily I533_14525 SM00987 UreE urease accessory protein, C-terminal domain I533_14545 SM00382 ATPases associated with a variety of cellular activities I533_14555 SM00829 Enoylreductase I533_14565 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I533_14570 SM00226 Low molecular weight phosphatase family I533_14585 SM00448 cheY-homologous receiver domain I533_14595 SM00448 cheY-homologous receiver domain I533_14595 SM00862 Transcriptional regulatory protein, C terminal I533_14600 SM00387 Histidine kinase-like ATPases I533_14600 SM00388 His Kinase A (phosphoacceptor) domain I533_14640 SM00342 helix_turn_helix, arabinose operon control protein I533_14690 SM00749 bacterial OsmY and nodulation domain I533_14715 SM00421 helix_turn_helix, Lux Regulon I533_14715 SM00448 cheY-homologous receiver domain I533_14735 SM00345 helix_turn_helix gluconate operon transcriptional repressor I533_14735 SM00895 I533_14735 I533_14760 SM00267 diguanylate cyclase I533_14760 SM00448 cheY-homologous receiver domain I533_14780 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I533_14780 SM00091 PAS domain I533_14780 SM00387 Histidine kinase-like ATPases I533_14780 SM00388 His Kinase A (phosphoacceptor) domain I533_14780 SM00448 cheY-homologous receiver domain I533_14785 SM00287 Bacterial SH3 domain homologues I533_14785 SM00644 I533_14785 I533_14825 SM00450 Rhodanese Homology Domain I533_14975 SM00448 cheY-homologous receiver domain I533_14990 SM01230 I533_14990 I533_15000 SM00091 PAS domain I533_15000 SM00387 Histidine kinase-like ATPases I533_15000 SM00388 His Kinase A (phosphoacceptor) domain I533_15005 SM00382 ATPases associated with a variety of cellular activities I533_15005 SM00448 cheY-homologous receiver domain I533_15010 SM00073 Histidine Phosphotransfer domain I533_15015 SM00563 Phosphate acyltransferases I533_15045 SM00244 prohibitin homologues I533_15055 SM00387 Histidine kinase-like ATPases I533_15055 SM00388 His Kinase A (phosphoacceptor) domain I533_15055 SM00448 cheY-homologous receiver domain I533_15055 SM01358 I533_15055 I533_15160 SM00530 Helix-turn-helix XRE-family like proteins I533_15185 SM00382 ATPases associated with a variety of cellular activities I533_15270 SM00886 Stress responsive A/B Barrel Domain I533_15280 SM00382 ATPases associated with a variety of cellular activities I533_15310 SM00382 ATPases associated with a variety of cellular activities I533_15415 SM00849 Metallo-beta-lactamase superfamily I533_15415 SM01027 Beta-Casp domain I533_15430 SM00996 S-adenosyl-L-homocysteine hydrolase I533_15430 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain I533_15435 SM00267 diguanylate cyclase I533_15455 SM00564 beta-propeller repeat I533_15460 SM00062 Bacterial periplasmic substrate-binding proteins I533_15475 SM00382 ATPases associated with a variety of cellular activities I533_15505 SM00729 Elongator protein 3, MiaB family, Radical SAM I533_15530 SM00421 helix_turn_helix, Lux Regulon I533_15530 SM00448 cheY-homologous receiver domain I533_15535 SM00091 PAS domain I533_15535 SM00387 Histidine kinase-like ATPases I533_15535 SM00388 His Kinase A (phosphoacceptor) domain I533_15535 SM00448 cheY-homologous receiver domain I533_15540 SM00897 FIST N domain I533_15540 SM01204 I533_15540 I533_15545 SM00900 I533_15545 I533_15555 SM00421 helix_turn_helix, Lux Regulon I533_15555 SM00448 cheY-homologous receiver domain I533_15590 SM00421 helix_turn_helix, Lux Regulon I533_15620 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins I533_15625 SM00421 helix_turn_helix, Lux Regulon I533_15625 SM00448 cheY-homologous receiver domain I533_15640 SM00487 DEAD-like helicases superfamily I533_15640 SM00490 helicase superfamily c-terminal domain I533_15645 SM00052 Putative diguanylate phosphodiesterase I533_15645 SM00267 diguanylate cyclase I533_15645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_15670 SM00710 Parallel beta-helix repeats I533_15675 SM00345 helix_turn_helix gluconate operon transcriptional repressor I533_15675 SM00895 I533_15675 I533_15700 SM00155 Phospholipase D. Active site motifs. I533_15730 SM00448 cheY-homologous receiver domain I533_15740 SM00387 Histidine kinase-like ATPases I533_15745 SM00849 Metallo-beta-lactamase superfamily I533_15750 SM00486 DNA polymerase type-B family I533_15765 SM00360 RNA recognition motif I533_15800 SM00986 Uracil DNA glycosylase superfamily I533_15800 SM00987 UreE urease accessory protein, C-terminal domain I533_15805 SM00052 Putative diguanylate phosphodiesterase I533_15805 SM00267 diguanylate cyclase I533_15805 SM00448 cheY-homologous receiver domain I533_15885 SM00173 Ras subfamily of RAS small GTPases I533_15885 SM00175 Rab subfamily of small GTPases I533_15890 SM00052 Putative diguanylate phosphodiesterase I533_15890 SM00267 diguanylate cyclase I533_15900 SM00563 Phosphate acyltransferases I533_15905 SM00563 Phosphate acyltransferases I533_16040 SM00052 Putative diguanylate phosphodiesterase I533_16065 SM00849 Metallo-beta-lactamase superfamily I533_16100 SM00530 Helix-turn-helix XRE-family like proteins I533_16120 SM00903 Flavin reductase like domain I533_16155 SM00100 Cyclic nucleotide-monophosphate binding domain I533_16190 SM00354 helix_turn _helix lactose operon repressor I533_16195 SM00849 Metallo-beta-lactamase superfamily I533_16235 SM00900 I533_16235 I533_16325 SM00028 Tetratricopeptide repeats I533_16335 SM00267 diguanylate cyclase I533_16335 SM00448 cheY-homologous receiver domain I533_16340 SM00479 I533_16340 I533_16345 SM00116 Domain in cystathionine beta-synthase and other proteins. I533_16360 SM00387 Histidine kinase-like ATPases I533_16360 SM00388 His Kinase A (phosphoacceptor) domain I533_16360 SM00448 cheY-homologous receiver domain I533_16390 SM00421 helix_turn_helix, Lux Regulon I533_16390 SM00448 cheY-homologous receiver domain I533_16415 SM01358 I533_16415 I533_16430 SM00052 Putative diguanylate phosphodiesterase I533_16430 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I533_16430 SM00091 PAS domain I533_16430 SM00267 diguanylate cyclase I533_16460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_16500 SM00984 UDP binding domain I533_16655 SM00028 Tetratricopeptide repeats I533_16660 SM00327 von Willebrand factor (vWF) type A domain I533_16660 SM00564 beta-propeller repeat I533_16770 SM00662 RNA polymerases D I533_16775 SM00363 S4 RNA-binding domain I533_16775 SM01390 I533_16775 I533_16840 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I533_16845 SM01374 I533_16845 I533_16850 SM00387 Histidine kinase-like ATPases I533_16850 SM00388 His Kinase A (phosphoacceptor) domain I533_16850 SM00448 cheY-homologous receiver domain I533_16870 SM00967 RNA 2'-O ribose methyltransferase substrate binding I533_16875 SM00316 Ribosomal protein S1-like RNA-binding domain I533_16875 SM00357 Cold shock protein domain I533_16875 SM00955 I533_16875 I533_16920 SM00671 Sel1-like repeats. I533_16960 SM00387 Histidine kinase-like ATPases I533_16960 SM00388 His Kinase A (phosphoacceptor) domain I533_16960 SM00448 cheY-homologous receiver domain I533_16985 SM00344 helix_turn_helix ASNC type I533_16995 SM00357 Cold shock protein domain I533_17025 SM00448 cheY-homologous receiver domain I533_17035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_17035 SM00387 Histidine kinase-like ATPases I533_17035 SM00388 His Kinase A (phosphoacceptor) domain I533_17040 SM00448 cheY-homologous receiver domain I533_17050 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I533_17110 SM00382 ATPases associated with a variety of cellular activities I533_17115 SM00421 helix_turn_helix, Lux Regulon I533_17140 SM00382 ATPases associated with a variety of cellular activities I533_17140 SM01086 C-terminal, D2-small domain, of ClpB protein I533_17155 SM00487 DEAD-like helicases superfamily I533_17155 SM00490 helicase superfamily c-terminal domain I533_17170 SM00919 Malic enzyme, NAD binding domain I533_17170 SM01274 I533_17170 I533_17220 SM00052 Putative diguanylate phosphodiesterase I533_17235 SM00382 ATPases associated with a variety of cellular activities I533_17240 SM00382 ATPases associated with a variety of cellular activities I533_17240 SM00962 SRP54-type protein, GTPase domain I533_17240 SM00963 SRP54-type protein, helical bundle domain I533_17310 SM00052 Putative diguanylate phosphodiesterase I533_17325 SM00382 ATPases associated with a variety of cellular activities I533_17330 SM00448 cheY-homologous receiver domain I533_17330 SM00862 Transcriptional regulatory protein, C terminal I533_17335 SM00387 Histidine kinase-like ATPases I533_17335 SM00388 His Kinase A (phosphoacceptor) domain I533_17345 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I533_17360 SM00116 Domain in cystathionine beta-synthase and other proteins. I533_17395 SM00838 Elongation factor G C-terminus I533_17395 SM00889 Elongation factor G, domain IV I533_17410 SM00663 RNA polymerase I subunit A N-terminus I533_17435 SM00649 Ribosomal protein L11/L12 I533_17455 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. I533_17455 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I533_17465 SM00382 ATPases associated with a variety of cellular activities I533_17485 SM00487 DEAD-like helicases superfamily I533_17485 SM00490 helicase superfamily c-terminal domain I533_17520 SM00642 Alpha-amylase domain I533_17555 SM00487 DEAD-like helicases superfamily I533_17555 SM00490 helicase superfamily c-terminal domain I533_17560 SM00849 Metallo-beta-lactamase superfamily I533_17570 SM00841 Elongation factor P, C-terminal I533_17570 SM01185 I533_17570 I533_17645 SM00244 prohibitin homologues I533_17650 SM00244 prohibitin homologues I533_17670 SM01340 I533_17670 I533_17675 SM00257 Lysin motif I533_17675 SM00646 I533_17675 I533_17735 SM00382 ATPases associated with a variety of cellular activities I533_17770 SM00849 Metallo-beta-lactamase superfamily I533_17790 SM00387 Histidine kinase-like ATPases I533_17790 SM00388 His Kinase A (phosphoacceptor) domain I533_17800 SM00382 ATPases associated with a variety of cellular activities I533_17810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_17815 SM00387 Histidine kinase-like ATPases I533_17820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I533_17865 SM00354 helix_turn _helix lactose operon repressor I533_17875 SM00382 ATPases associated with a variety of cellular activities I533_17880 SM00382 ATPases associated with a variety of cellular activities I533_17905 SM00382 ATPases associated with a variety of cellular activities I533_17940 SM00267 diguanylate cyclase I533_18000 SM00116 Domain in cystathionine beta-synthase and other proteins. I533_18015 SM00867 YceI-like domain I533_18045 SM00829 Enoylreductase I533_18050 SM00267 diguanylate cyclase I533_18055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_18055 SM00387 Histidine kinase-like ATPases I533_18055 SM00388 His Kinase A (phosphoacceptor) domain I533_18055 SM00448 cheY-homologous receiver domain I533_18170 SM00422 helix_turn_helix, mercury resistance I533_18180 SM00382 ATPases associated with a variety of cellular activities I533_18205 SM00420 helix_turn_helix, Deoxyribose operon repressor I533_18205 SM01134 I533_18205 I533_18220 SM00267 diguanylate cyclase I533_18235 SM00342 helix_turn_helix, arabinose operon control protein I533_18235 SM01009 AlkA N-terminal domain I533_18265 SM01002 Alanine dehydrogenase/PNT, C-terminal domain I533_18265 SM01003 Alanine dehydrogenase/PNT, N-terminal domain I533_18290 SM00965 Secretin and TonB N terminus short domain I533_18355 SM00670 Large family of predicted nucleotide-binding domains I533_18380 SM00883 Chaperonin 10 Kd subunit I533_18415 SM00878 Biotin carboxylase C-terminal domain I533_18435 SM00479 I533_18435 I533_18435 SM00990 I533_18435 I533_18465 SM00062 Bacterial periplasmic substrate-binding proteins I533_18485 SM00798 AICARFT/IMPCHase bienzyme I533_18485 SM00851 MGS-like domain I533_18495 SM01209 I533_18495 I533_18495 SM01210 I533_18495 I533_18500 SM00047 Lysozyme subfamily 2 I533_18525 SM00448 cheY-homologous receiver domain I533_18525 SM00862 Transcriptional regulatory protein, C terminal I533_18535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I533_18535 SM00387 Histidine kinase-like ATPases I533_18535 SM00388 His Kinase A (phosphoacceptor) domain I533_18560 SM00363 S4 RNA-binding domain I533_18575 SM00382 ATPases associated with a variety of cellular activities I533_18655 SM00867 YceI-like domain I533_18690 SM00382 ATPases associated with a variety of cellular activities I533_18715 SM00320 WD40 repeats I533_18735 SM00316 Ribosomal protein S1-like RNA-binding domain I533_18735 SM00732 Likely ribonuclease with RNase H fold. I533_18765 SM00631 I533_18765 I533_18860 SM00563 Phosphate acyltransferases I533_18880 SM00382 ATPases associated with a variety of cellular activities I533_18945 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I533_19050 SM00530 Helix-turn-helix XRE-family like proteins I533_19060 SM00530 Helix-turn-helix XRE-family like proteins I533_19065 SM00487 DEAD-like helicases superfamily I533_19080 SM00028 Tetratricopeptide repeats I533_19085 SM00849 Metallo-beta-lactamase superfamily I533_19095 SM00421 helix_turn_helix, Lux Regulon I533_19120 SM00327 von Willebrand factor (vWF) type A domain I533_19125 SM00327 von Willebrand factor (vWF) type A domain I533_19180 SM00342 helix_turn_helix, arabinose operon control protein I533_19305 SM01234 I533_19305