locus-tag class description FJN13_00025 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJN13_00025 PF02811 PHP domain FJN13_00025 PF01336 OB-fold nucleic acid binding domain FJN13_00025 PF14579 Helix-hairpin-helix motif FJN13_00025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJN13_00055 PF04389 Peptidase family M28 FJN13_00055 PF02225 PA domain FJN13_00060 PF00294 pfkB family carbohydrate kinase FJN13_00060 PF01467 Cytidylyltransferase-like FJN13_00075 PF00440 Bacterial regulatory proteins, tetR family FJN13_00080 PF02441 Flavoprotein FJN13_00080 PF04127 DNA / pantothenate metabolism flavoprotein FJN13_00085 PF04002 RadC-like JAB domain FJN13_00105 PF06082 Exopolysaccharide biosynthesis protein YbjH FJN13_00110 PF00830 Ribosomal L28 family FJN13_00115 PF00471 Ribosomal protein L33 FJN13_00125 PF06827 Zinc finger found in FPG and IleRS FJN13_00125 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FJN13_00125 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FJN13_00130 PF01467 Cytidylyltransferase-like FJN13_00140 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FJN13_00155 PF00990 Diguanylate cyclase, GGDEF domain FJN13_00155 PF03707 Bacterial signalling protein N terminal repeat FJN13_00155 PF00563 EAL domain FJN13_00160 PF00155 Aminotransferase class I and II FJN13_00165 PF00107 Zinc-binding dehydrogenase FJN13_00165 PF08240 Alcohol dehydrogenase GroES-like domain FJN13_00170 PF00581 Rhodanese-like domain FJN13_00175 PF01694 Rhomboid family FJN13_00175 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FJN13_00185 PF04345 Chorismate lyase FJN13_00190 PF01040 UbiA prenyltransferase family FJN13_00205 PF04380 Membrane fusogenic activity FJN13_00210 PF13361 UvrD-like helicase C-terminal domain FJN13_00210 PF00580 UvrD/REP helicase N-terminal domain FJN13_00215 PF03707 Bacterial signalling protein N terminal repeat FJN13_00215 PF00563 EAL domain FJN13_00215 PF00990 Diguanylate cyclase, GGDEF domain FJN13_00220 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FJN13_00240 PF07804 HipA-like C-terminal domain FJN13_00240 PF13657 HipA N-terminal domain FJN13_00245 PF01381 Helix-turn-helix FJN13_00260 PF04143 Sulphur transport FJN13_00265 PF02028 BCCT, betaine/carnitine/choline family transporter FJN13_00300 PF13649 Methyltransferase domain FJN13_00305 PF13533 Biotin-lipoyl like FJN13_00310 PF00005 ABC transporter FJN13_00320 PF00593 TonB dependent receptor FJN13_00320 PF07715 TonB-dependent Receptor Plug Domain FJN13_00325 PF07715 TonB-dependent Receptor Plug Domain FJN13_00325 PF00593 TonB dependent receptor FJN13_00335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FJN13_00335 PF02770 Acyl-CoA dehydrogenase, middle domain FJN13_00335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FJN13_00340 PF03466 LysR substrate binding domain FJN13_00340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_00345 PF00753 Metallo-beta-lactamase superfamily FJN13_00350 PF04317 YcjX-like family, DUF463 FJN13_00365 PF04055 Radical SAM superfamily FJN13_00365 PF06968 Biotin and Thiamin Synthesis associated domain FJN13_00370 PF05690 Thiazole biosynthesis protein ThiG FJN13_00380 PF00899 ThiF family FJN13_00385 PF02581 Thiamine monophosphate synthase FJN13_00390 PF01964 Radical SAM ThiC family FJN13_00390 PF13667 ThiC-associated domain FJN13_00395 PF07219 HemY protein N-terminus FJN13_00395 PF07719 Tetratricopeptide repeat FJN13_00400 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FJN13_00405 PF02602 Uroporphyrinogen-III synthase HemD FJN13_00410 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FJN13_00410 PF03900 Porphobilinogen deaminase, C-terminal domain FJN13_00415 PF00990 Diguanylate cyclase, GGDEF domain FJN13_00415 PF00072 Response regulator receiver domain FJN13_00425 PF00625 Guanylate kinase FJN13_00430 PF01192 RNA polymerase Rpb6 FJN13_00435 PF02824 TGS domain FJN13_00435 PF04607 Region found in RelA / SpoT proteins FJN13_00435 PF13291 ACT domain FJN13_00440 PF01042 Endoribonuclease L-PSP FJN13_00445 PF12105 SpoU, rRNA methylase, C-terminal FJN13_00445 PF00588 SpoU rRNA Methylase family FJN13_00450 PF00270 DEAD/DEAH box helicase FJN13_00450 PF00271 Helicase conserved C-terminal domain FJN13_00450 PF17191 RecG wedge domain FJN13_00455 PF04445 Putative SAM-dependent methyltransferase FJN13_00460 PF08534 Redoxin FJN13_00475 PF00528 Binding-protein-dependent transport system inner membrane component FJN13_00480 PF08402 TOBE domain FJN13_00480 PF00005 ABC transporter FJN13_00485 PF05552 Conserved TM helix FJN13_00485 PF00924 Mechanosensitive ion channel FJN13_00500 PF04940 Sensors of blue-light using FAD FJN13_00500 PF00563 EAL domain FJN13_00505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_00505 PF03466 LysR substrate binding domain FJN13_00510 PF01810 LysE type translocator FJN13_00515 PF00893 Small Multidrug Resistance protein FJN13_00530 PF00529 HlyD membrane-fusion protein of T1SS FJN13_00530 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJN13_00535 PF00873 AcrB/AcrD/AcrF family FJN13_00545 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FJN13_00545 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FJN13_00550 PF00850 Histone deacetylase domain FJN13_00565 PF00672 HAMP domain FJN13_00565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_00565 PF02743 Cache domain FJN13_00575 PF11737 Protein of unknown function (DUF3300) FJN13_00580 PF00925 GTP cyclohydrolase II FJN13_00585 PF00990 Diguanylate cyclase, GGDEF domain FJN13_00585 PF00563 EAL domain FJN13_00585 PF08448 PAS fold FJN13_00600 PF00271 Helicase conserved C-terminal domain FJN13_00600 PF00270 DEAD/DEAH box helicase FJN13_00600 PF00570 HRDC domain FJN13_00600 PF09382 RQC domain FJN13_00600 PF16124 RecQ zinc-binding FJN13_00605 PF01769 Divalent cation transporter FJN13_00605 PF03448 MgtE intracellular N domain FJN13_00605 PF00571 CBS domain FJN13_00610 PF00892 EamA-like transporter family FJN13_00615 PF00072 Response regulator receiver domain FJN13_00615 PF00990 Diguanylate cyclase, GGDEF domain FJN13_00620 PF13361 UvrD-like helicase C-terminal domain FJN13_00620 PF00580 UvrD/REP helicase N-terminal domain FJN13_00625 PF00132 Bacterial transferase hexapeptide (six repeats) FJN13_00625 PF06426 Serine acetyltransferase, N-terminal FJN13_00630 PF13419 Haloacid dehalogenase-like hydrolase FJN13_00645 PF01678 Diaminopimelate epimerase FJN13_00650 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FJN13_00650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FJN13_00665 PF01569 PAP2 superfamily FJN13_00670 PF03737 Aldolase/RraA FJN13_00680 PF02441 Flavoprotein FJN13_00685 PF01225 Mur ligase family, catalytic domain FJN13_00685 PF08245 Mur ligase middle domain FJN13_00685 PF02875 Mur ligase family, glutamate ligase domain FJN13_00690 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FJN13_00695 PF00719 Inorganic pyrophosphatase FJN13_00730 PF17760 UvrA interaction domain FJN13_00730 PF00005 ABC transporter FJN13_00730 PF17755 UvrA DNA-binding domain FJN13_00735 PF07690 Major Facilitator Superfamily FJN13_00740 PF13419 Haloacid dehalogenase-like hydrolase FJN13_00755 PF00356 Bacterial regulatory proteins, lacI family FJN13_00765 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FJN13_00765 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FJN13_00770 PF08544 GHMP kinases C terminal FJN13_00770 PF10509 Galactokinase galactose-binding signature FJN13_00770 PF00288 GHMP kinases N terminal domain FJN13_00775 PF00474 Sodium:solute symporter family FJN13_00780 PF00436 Single-strand binding protein family FJN13_00795 PF16875 Glycosyl hydrolase family 36 N-terminal domain FJN13_00795 PF16874 Glycosyl hydrolase family 36 C-terminal domain FJN13_00800 PF00474 Sodium:solute symporter family FJN13_00820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FJN13_00820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FJN13_00825 PF08220 DeoR-like helix-turn-helix domain FJN13_00825 PF00455 DeoR C terminal sensor domain FJN13_00830 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FJN13_00830 PF01266 FAD dependent oxidoreductase FJN13_00865 PF03958 Bacterial type II/III secretion system short domain FJN13_00865 PF00263 Bacterial type II and III secretion system protein FJN13_00870 PF01471 Putative peptidoglycan binding domain FJN13_00870 PF13401 AAA domain FJN13_00880 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FJN13_00880 PF00437 Type II/IV secretion system protein FJN13_00885 PF00482 Type II secretion system (T2SS), protein F FJN13_00895 PF07963 Prokaryotic N-terminal methylation motif FJN13_00895 PF00114 Pilin (bacterial filament) FJN13_00905 PF00114 Pilin (bacterial filament) FJN13_00905 PF07963 Prokaryotic N-terminal methylation motif FJN13_00935 PF04085 rod shape-determining protein MreC FJN13_00940 PF04093 rod shape-determining protein MreD FJN13_00945 PF02545 Maf-like protein FJN13_00950 PF00575 S1 RNA binding domain FJN13_00950 PF10150 Ribonuclease E/G family FJN13_00960 PF00795 Carbon-nitrogen hydrolase FJN13_00965 PF01523 Putative modulator of DNA gyrase FJN13_00970 PF04751 Protein of unknown function (DUF615) FJN13_00975 PF01523 Putative modulator of DNA gyrase FJN13_00985 PF16353 Domain of unknown function(DUF4981) FJN13_00985 PF02837 Glycosyl hydrolases family 2, sugar binding domain FJN13_00985 PF00703 Glycosyl hydrolases family 2 FJN13_00985 PF02929 Beta galactosidase small chain FJN13_00985 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FJN13_00990 PF00486 Transcriptional regulatory protein, C terminal FJN13_00990 PF00072 Response regulator receiver domain FJN13_00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_00995 PF00497 Bacterial extracellular solute-binding proteins, family 3 FJN13_00995 PF00512 His Kinase A (phospho-acceptor) domain FJN13_01000 PF00534 Glycosyl transferases group 1 FJN13_01000 PF08323 Starch synthase catalytic domain FJN13_01005 PF05175 Methyltransferase small domain FJN13_01005 PF08468 Methyltransferase small domain N-terminal FJN13_01010 PF02390 Putative methyltransferase FJN13_01015 PF00561 alpha/beta hydrolase fold FJN13_01020 PF00633 Helix-hairpin-helix motif FJN13_01020 PF00730 HhH-GPD superfamily base excision DNA repair protein FJN13_01020 PF14815 NUDIX domain FJN13_01025 PF04362 Bacterial Fe(2+) trafficking FJN13_01045 PF08787 Alginate lyase FJN13_01055 PF03466 LysR substrate binding domain FJN13_01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_01060 PF07690 Major Facilitator Superfamily FJN13_01065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_01065 PF00672 HAMP domain FJN13_01065 PF17200 Single Cache domain 2 FJN13_01070 PF00072 Response regulator receiver domain FJN13_01075 PF01584 CheW-like domain FJN13_01075 PF02895 Signal transducing histidine kinase, homodimeric domain FJN13_01075 PF01627 Hpt domain FJN13_01075 PF09078 CheY binding FJN13_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_01080 PF01584 CheW-like domain FJN13_01085 PF08447 PAS fold FJN13_01085 PF13426 PAS domain FJN13_01085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_01090 PF01739 CheR methyltransferase, SAM binding domain FJN13_01090 PF03705 CheR methyltransferase, all-alpha domain FJN13_01095 PF03975 CheD chemotactic sensory transduction FJN13_01100 PF01339 CheB methylesterase FJN13_01100 PF00072 Response regulator receiver domain FJN13_01105 PF17200 Single Cache domain 2 FJN13_01105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_01105 PF00672 HAMP domain FJN13_01110 PF00072 Response regulator receiver domain FJN13_01115 PF09078 CheY binding FJN13_01115 PF02895 Signal transducing histidine kinase, homodimeric domain FJN13_01115 PF01627 Hpt domain FJN13_01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_01115 PF01584 CheW-like domain FJN13_01120 PF01584 CheW-like domain FJN13_01125 PF08447 PAS fold FJN13_01125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_01125 PF13426 PAS domain FJN13_01130 PF08447 PAS fold FJN13_01130 PF13426 PAS domain FJN13_01130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_01135 PF03705 CheR methyltransferase, all-alpha domain FJN13_01135 PF01739 CheR methyltransferase, SAM binding domain FJN13_01140 PF03975 CheD chemotactic sensory transduction FJN13_01145 PF01339 CheB methylesterase FJN13_01145 PF00072 Response regulator receiver domain FJN13_01165 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FJN13_01165 PF00356 Bacterial regulatory proteins, lacI family FJN13_01175 PF01204 Trehalase FJN13_01190 PF13419 Haloacid dehalogenase-like hydrolase FJN13_01195 PF13426 PAS domain FJN13_01195 PF00072 Response regulator receiver domain FJN13_01195 PF08448 PAS fold FJN13_01195 PF00512 His Kinase A (phospho-acceptor) domain FJN13_01195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_01210 PF00356 Bacterial regulatory proteins, lacI family FJN13_01215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FJN13_01215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FJN13_01225 PF03825 Nucleoside H+ symporter FJN13_01230 PF01261 Xylose isomerase-like TIM barrel FJN13_01235 PF05199 GMC oxidoreductase FJN13_01235 PF00732 GMC oxidoreductase FJN13_01250 PF00465 Iron-containing alcohol dehydrogenase FJN13_01260 PF01063 Amino-transferase class IV FJN13_01265 PF00300 Histidine phosphatase superfamily (branch 1) FJN13_01275 PF00330 Aconitase family (aconitate hydratase) FJN13_01275 PF00694 Aconitase C-terminal domain FJN13_01285 PF00437 Type II/IV secretion system protein FJN13_01290 PF00338 Ribosomal protein S10p/S20e FJN13_01295 PF00297 Ribosomal protein L3 FJN13_01300 PF00573 Ribosomal protein L4/L1 family FJN13_01305 PF00276 Ribosomal protein L23 FJN13_01310 PF03947 Ribosomal Proteins L2, C-terminal domain FJN13_01310 PF00181 Ribosomal Proteins L2, RNA binding domain FJN13_01315 PF00203 Ribosomal protein S19 FJN13_01320 PF00237 Ribosomal protein L22p/L17e FJN13_01325 PF00189 Ribosomal protein S3, C-terminal domain FJN13_01325 PF07650 KH domain FJN13_01330 PF00252 Ribosomal protein L16p/L10e FJN13_01335 PF00831 Ribosomal L29 protein FJN13_01340 PF00366 Ribosomal protein S17 FJN13_01345 PF13439 Glycosyltransferase Family 4 FJN13_01345 PF00534 Glycosyl transferases group 1 FJN13_01355 PF00534 Glycosyl transferases group 1 FJN13_01355 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FJN13_01375 PF02743 Cache domain FJN13_01375 PF00672 HAMP domain FJN13_01375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_01380 PF01432 Peptidase family M3 FJN13_01390 PF00551 Formyl transferase FJN13_01390 PF01842 ACT domain FJN13_01400 PF08482 ATP-dependent helicase C-terminal FJN13_01400 PF00271 Helicase conserved C-terminal domain FJN13_01400 PF04408 Helicase associated domain (HA2) FJN13_01400 PF00270 DEAD/DEAH box helicase FJN13_01405 PF13406 Transglycosylase SLT domain FJN13_01410 PF00905 Penicillin binding protein transpeptidase domain FJN13_01410 PF14814 Bifunctional transglycosylase second domain FJN13_01410 PF00912 Transglycosylase FJN13_01420 PF05661 Protein of unknown function (DUF808) FJN13_01430 PF12833 Helix-turn-helix domain FJN13_01440 PF00543 Nitrogen regulatory protein P-II FJN13_01445 PF00909 Ammonium Transporter Family FJN13_01455 PF04261 Dyp-type peroxidase family FJN13_01460 PF00211 Adenylate and Guanylate cyclase catalytic domain FJN13_01460 PF00672 HAMP domain FJN13_01465 PF00202 Aminotransferase class-III FJN13_01470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FJN13_01470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FJN13_01485 PF00873 AcrB/AcrD/AcrF family FJN13_01495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_01495 PF00512 His Kinase A (phospho-acceptor) domain FJN13_01495 PF00672 HAMP domain FJN13_01495 PF01627 Hpt domain FJN13_01495 PF00072 Response regulator receiver domain FJN13_01495 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJN13_01500 PF03989 DNA gyrase C-terminal domain, beta-propeller FJN13_01500 PF00521 DNA gyrase/topoisomerase IV, subunit A FJN13_01510 PF00990 Diguanylate cyclase, GGDEF domain FJN13_01510 PF00563 EAL domain FJN13_01510 PF13188 PAS domain FJN13_01510 PF03707 Bacterial signalling protein N terminal repeat FJN13_01520 PF00171 Aldehyde dehydrogenase family FJN13_01525 PF04958 Arginine N-succinyltransferase beta subunit FJN13_01530 PF00202 Aminotransferase class-III FJN13_01540 PF00117 Glutamine amidotransferase class-I FJN13_01545 PF00579 tRNA synthetases class I (W and Y) FJN13_01550 PF00834 Ribulose-phosphate 3 epimerase family FJN13_01570 PF02086 D12 class N6 adenine-specific DNA methyltransferase FJN13_01580 PF01761 3-dehydroquinate synthase FJN13_01585 PF01202 Shikimate kinase FJN13_01590 PF07660 Secretin and TonB N terminus short domain FJN13_01590 PF03958 Bacterial type II/III secretion system short domain FJN13_01590 PF00263 Bacterial type II and III secretion system protein FJN13_01590 PF11741 AMIN domain FJN13_01615 PF00905 Penicillin binding protein transpeptidase domain FJN13_01615 PF00912 Transglycosylase FJN13_01615 PF17092 Penicillin-binding protein OB-like domain FJN13_01620 PF00390 Malic enzyme, N-terminal domain FJN13_01620 PF03949 Malic enzyme, NAD binding domain FJN13_01630 PF02798 Glutathione S-transferase, N-terminal domain FJN13_01640 PF00199 Catalase FJN13_01640 PF06628 Catalase-related immune-responsive FJN13_01665 PF03707 Bacterial signalling protein N terminal repeat FJN13_01665 PF00990 Diguanylate cyclase, GGDEF domain FJN13_01665 PF00563 EAL domain FJN13_01670 PF00696 Amino acid kinase family FJN13_01670 PF00583 Acetyltransferase (GNAT) family FJN13_01675 PF00206 Lyase FJN13_01675 PF14698 Argininosuccinate lyase C-terminal FJN13_01680 PF00764 Arginosuccinate synthase FJN13_01685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FJN13_01685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FJN13_01690 PF00696 Amino acid kinase family FJN13_01695 PF02774 Semialdehyde dehydrogenase, dimerisation domain FJN13_01695 PF01118 Semialdehyde dehydrogenase, NAD binding domain FJN13_01700 PF02142 MGS-like domain FJN13_01710 PF02107 Flagellar L-ring protein FJN13_01725 PF00486 Transcriptional regulatory protein, C terminal FJN13_01725 PF00072 Response regulator receiver domain FJN13_01730 PF00512 His Kinase A (phospho-acceptor) domain FJN13_01730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_01730 PF16527 Two-component sensor protein CpxA, periplasmic domain FJN13_01730 PF00672 HAMP domain FJN13_01735 PF12146 Serine aminopeptidase, S33 FJN13_01740 PF00588 SpoU rRNA Methylase family FJN13_01750 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FJN13_01750 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FJN13_01755 PF02556 Preprotein translocase subunit SecB FJN13_01760 PF00462 Glutaredoxin FJN13_01765 PF00581 Rhodanese-like domain FJN13_01770 PF01551 Peptidase family M23 FJN13_01775 PF04748 Divergent polysaccharide deacetylase FJN13_01795 PF02666 Phosphatidylserine decarboxylase FJN13_01800 PF03193 RsgA GTPase FJN13_01805 PF00929 Exonuclease FJN13_01825 PF07715 TonB-dependent Receptor Plug Domain FJN13_01825 PF00593 TonB dependent receptor FJN13_01830 PF13181 Tetratricopeptide repeat FJN13_01845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FJN13_01845 PF00205 Thiamine pyrophosphate enzyme, central domain FJN13_01845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FJN13_01850 PF10369 Small subunit of acetolactate synthase FJN13_01860 PF02416 mttA/Hcf106 family FJN13_01865 PF02416 mttA/Hcf106 family FJN13_01870 PF00902 Sec-independent protein translocase protein (TatC) FJN13_01880 PF01026 TatD related DNase FJN13_01885 PF00360 Phytochrome region FJN13_01885 PF00563 EAL domain FJN13_01885 PF00990 Diguanylate cyclase, GGDEF domain FJN13_01885 PF01590 GAF domain FJN13_01890 PF00490 Delta-aminolevulinic acid dehydratase FJN13_01895 PF02541 Ppx/GppA phosphatase family FJN13_01900 PF00270 DEAD/DEAH box helicase FJN13_01900 PF00271 Helicase conserved C-terminal domain FJN13_01905 PF00085 Thioredoxin FJN13_01910 PF07498 Rho termination factor, N-terminal domain FJN13_01910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FJN13_01910 PF07497 Rho termination factor, RNA-binding domain FJN13_01920 PF00512 His Kinase A (phospho-acceptor) domain FJN13_01920 PF09308 LuxQ, periplasmic FJN13_01920 PF00072 Response regulator receiver domain FJN13_01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_01925 PF06965 Na+/H+ antiporter 1 FJN13_01930 PF00731 AIR carboxylase FJN13_01935 PF02222 ATP-grasp domain FJN13_01935 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FJN13_01950 PF00210 Ferritin-like domain FJN13_01955 PF07995 Glucose / Sorbosone dehydrogenase FJN13_01960 PF00326 Prolyl oligopeptidase family FJN13_01960 PF07676 WD40-like Beta Propeller Repeat FJN13_01970 PF00085 Thioredoxin FJN13_01985 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FJN13_01990 PF00709 Adenylosuccinate synthetase FJN13_01995 PF00171 Aldehyde dehydrogenase family FJN13_02015 PF03553 Na+/H+ antiporter family FJN13_02020 PF00933 Glycosyl hydrolase family 3 N terminal domain FJN13_02030 PF07075 Protein of unknown function (DUF1343) FJN13_02035 PF01380 SIS domain FJN13_02040 PF00842 Alanine racemase, C-terminal domain FJN13_02040 PF01168 Alanine racemase, N-terminal domain FJN13_02045 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FJN13_02055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FJN13_02080 PF08274 PhnA Zinc-Ribbon FJN13_02080 PF03831 PhnA domain FJN13_02085 PF00583 Acetyltransferase (GNAT) family FJN13_02105 PF01381 Helix-turn-helix FJN13_02110 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB FJN13_02120 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FJN13_02230 PF00589 Phage integrase family FJN13_02230 PF13495 Phage integrase, N-terminal SAM-like domain FJN13_02235 PF00108 Thiolase, N-terminal domain FJN13_02235 PF02803 Thiolase, C-terminal domain FJN13_02240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FJN13_02240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FJN13_02240 PF00378 Enoyl-CoA hydratase/isomerase FJN13_02245 PF14718 Soluble lytic murein transglycosylase L domain FJN13_02245 PF01464 Transglycosylase SLT domain FJN13_02250 PF00557 Metallopeptidase family M24 FJN13_02260 PF00348 Polyprenyl synthetase FJN13_02265 PF00829 Ribosomal prokaryotic L21 protein FJN13_02270 PF01016 Ribosomal L27 protein FJN13_02275 PF01018 GTP1/OBG FJN13_02275 PF01926 50S ribosome-binding GTPase FJN13_02280 PF00186 Dihydrofolate reductase FJN13_02285 PF00140 Sigma-70 factor, region 1.2 FJN13_02285 PF04545 Sigma-70, region 4 FJN13_02285 PF04542 Sigma-70 region 2 FJN13_02285 PF04539 Sigma-70 region 3 FJN13_02290 PF01476 LysM domain FJN13_02290 PF01551 Peptidase family M23 FJN13_02295 PF09335 SNARE associated Golgi protein FJN13_02305 PF01142 tRNA pseudouridine synthase D (TruD) FJN13_02310 PF02542 YgbB family FJN13_02315 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FJN13_02320 PF04977 Septum formation initiator FJN13_02330 PF00672 HAMP domain FJN13_02330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_02330 PF17200 Single Cache domain 2 FJN13_02340 PF14850 DNA-binding domain of Proline dehydrogenase FJN13_02340 PF01619 Proline dehydrogenase FJN13_02340 PF00171 Aldehyde dehydrogenase family FJN13_02340 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FJN13_02365 PF02976 DNA mismatch repair enzyme MutH FJN13_02370 PF00293 NUDIX domain FJN13_02375 PF00391 PEP-utilising enzyme, mobile domain FJN13_02375 PF02896 PEP-utilising enzyme, TIM barrel domain FJN13_02375 PF01590 GAF domain FJN13_02375 PF05524 PEP-utilising enzyme, N-terminal FJN13_02380 PF01925 Sulfite exporter TauE/SafE FJN13_02385 PF01790 Prolipoprotein diacylglyceryl transferase FJN13_02390 PF00303 Thymidylate synthase FJN13_02395 PF00072 Response regulator receiver domain FJN13_02395 PF01339 CheB methylesterase FJN13_02400 PF00072 Response regulator receiver domain FJN13_02400 PF00990 Diguanylate cyclase, GGDEF domain FJN13_02405 PF07690 Major Facilitator Superfamily FJN13_02420 PF00849 RNA pseudouridylate synthase FJN13_02425 PF12137 RNA polymerase recycling family C-terminal FJN13_02425 PF00176 SNF2 family N-terminal domain FJN13_02425 PF18337 RapA N-terminal Tudor like domain FJN13_02425 PF18339 RapA N-terminal Tudor like domain 1 FJN13_02425 PF00271 Helicase conserved C-terminal domain FJN13_02440 PF13638 PIN domain FJN13_02440 PF02562 PhoH-like protein FJN13_02450 PF10414 Sirohaem synthase dimerisation region FJN13_02450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FJN13_02455 PF03880 DbpA RNA binding domain FJN13_02455 PF00270 DEAD/DEAH box helicase FJN13_02455 PF00271 Helicase conserved C-terminal domain FJN13_02470 PF02321 Outer membrane efflux protein FJN13_02475 PF00293 NUDIX domain FJN13_02485 PF00149 Calcineurin-like phosphoesterase FJN13_02490 PF05728 Uncharacterised protein family (UPF0227) FJN13_02495 PF01751 Toprim domain FJN13_02495 PF00986 DNA gyrase B subunit, carboxyl terminus FJN13_02495 PF00204 DNA gyrase B FJN13_02495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_02505 PF13419 Haloacid dehalogenase-like hydrolase FJN13_02530 PF04055 Radical SAM superfamily FJN13_02540 PF00152 tRNA synthetases class II (D, K and N) FJN13_02545 PF00593 TonB dependent receptor FJN13_02545 PF07715 TonB-dependent Receptor Plug Domain FJN13_02555 PF13302 Acetyltransferase (GNAT) domain FJN13_02560 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FJN13_02565 PF05175 Methyltransferase small domain FJN13_02575 PF01722 BolA-like protein FJN13_02580 PF01569 PAP2 superfamily FJN13_02590 PF08376 Nitrate and nitrite sensing FJN13_02590 PF03861 ANTAR domain FJN13_02600 PF00916 Sulfate permease family FJN13_02600 PF01740 STAS domain FJN13_02610 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_02610 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FJN13_02610 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FJN13_02610 PF04324 BFD-like [2Fe-2S] binding domain FJN13_02610 PF18267 Rubredoxin NAD+ reductase C-terminal domain FJN13_02620 PF01568 Molydopterin dinucleotide binding domain FJN13_02620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJN13_02620 PF00384 Molybdopterin oxidoreductase FJN13_02620 PF04324 BFD-like [2Fe-2S] binding domain FJN13_02625 PF10414 Sirohaem synthase dimerisation region FJN13_02625 PF14824 Sirohaem biosynthesis protein central FJN13_02625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FJN13_02630 PF02885 Glycosyl transferase family, helical bundle domain FJN13_02630 PF00591 Glycosyl transferase family, a/b domain FJN13_02635 PF08447 PAS fold FJN13_02635 PF13426 PAS domain FJN13_02635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_02640 PF00005 ABC transporter FJN13_02645 PF00528 Binding-protein-dependent transport system inner membrane component FJN13_02650 PF00005 ABC transporter FJN13_02665 PF01323 DSBA-like thioredoxin domain FJN13_02670 PF00593 TonB dependent receptor FJN13_02670 PF07715 TonB-dependent Receptor Plug Domain FJN13_02675 PF01636 Phosphotransferase enzyme family FJN13_02680 PF13746 4Fe-4S dicluster domain FJN13_02680 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FJN13_02680 PF12801 4Fe-4S binding domain FJN13_02695 PF02770 Acyl-CoA dehydrogenase, middle domain FJN13_02695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FJN13_02695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FJN13_02695 PF12806 Acetyl-CoA dehydrogenase C-terminal like FJN13_02710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FJN13_02710 PF13378 Enolase C-terminal domain-like FJN13_02715 PF00596 Class II Aldolase and Adducin N-terminal domain FJN13_02725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJN13_02730 PF00873 AcrB/AcrD/AcrF family FJN13_02745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_02745 PF00672 HAMP domain FJN13_02745 PF02743 Cache domain FJN13_02750 PF00140 Sigma-70 factor, region 1.2 FJN13_02750 PF04542 Sigma-70 region 2 FJN13_02750 PF04545 Sigma-70, region 4 FJN13_02750 PF03979 Sigma-70 factor, region 1.1 FJN13_02750 PF04546 Sigma-70, non-essential region FJN13_02750 PF04539 Sigma-70 region 3 FJN13_02755 PF01807 CHC2 zinc finger FJN13_02755 PF08278 DNA primase DnaG DnaB-binding FJN13_02755 PF08275 DNA primase catalytic core, N-terminal domain FJN13_02755 PF10410 DnaB-helicase binding domain of primase FJN13_02760 PF09424 Yqey-like protein FJN13_02765 PF01165 Ribosomal protein S21 FJN13_02770 PF00814 Glycoprotease family FJN13_02780 PF02660 Glycerol-3-phosphate acyltransferase FJN13_02785 PF02152 Dihydroneopterin aldolase FJN13_02795 PF02673 Bacitracin resistance protein BacA FJN13_02800 PF01230 HIT domain FJN13_02815 PF03594 Benzoate membrane transport protein FJN13_02820 PF07883 Cupin domain FJN13_02820 PF01381 Helix-turn-helix FJN13_02825 PF04381 Putative exonuclease, RdgC FJN13_02830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_02830 PF00497 Bacterial extracellular solute-binding proteins, family 3 FJN13_02830 PF00512 His Kinase A (phospho-acceptor) domain FJN13_02835 PF00072 Response regulator receiver domain FJN13_02835 PF00486 Transcriptional regulatory protein, C terminal FJN13_02840 PF11808 Phosphate regulon sensor protein PhoR FJN13_02840 PF00989 PAS fold FJN13_02840 PF00512 His Kinase A (phospho-acceptor) domain FJN13_02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_02845 PF12849 PBP superfamily domain FJN13_02865 PF01618 MotA/TolQ/ExbB proton channel family FJN13_02870 PF01618 MotA/TolQ/ExbB proton channel family FJN13_02875 PF02472 Biopolymer transport protein ExbD/TolR FJN13_02880 PF03544 Gram-negative bacterial TonB protein C-terminal FJN13_02890 PF00072 Response regulator receiver domain FJN13_02895 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJN13_02895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_02895 PF00672 HAMP domain FJN13_02895 PF00512 His Kinase A (phospho-acceptor) domain FJN13_02895 PF01627 Hpt domain FJN13_02895 PF00072 Response regulator receiver domain FJN13_02900 PF13193 AMP-binding enzyme C-terminal domain FJN13_02900 PF00501 AMP-binding enzyme FJN13_02910 PF07995 Glucose / Sorbosone dehydrogenase FJN13_02915 PF06434 Aconitate hydratase 2 N-terminus FJN13_02915 PF11791 Aconitate B N-terminal domain FJN13_02915 PF00330 Aconitase family (aconitate hydratase) FJN13_02920 PF01048 Phosphorylase superfamily FJN13_02940 PF11791 Aconitate B N-terminal domain FJN13_02940 PF06434 Aconitate hydratase 2 N-terminus FJN13_02940 PF00330 Aconitase family (aconitate hydratase) FJN13_02950 PF00696 Amino acid kinase family FJN13_02950 PF01842 ACT domain FJN13_02955 PF00672 HAMP domain FJN13_02955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_02960 PF00149 Calcineurin-like phosphoesterase FJN13_02965 PF04379 ApaG domain FJN13_02970 PF00398 Ribosomal RNA adenine dimethylase FJN13_02975 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FJN13_02980 PF09312 SurA N-terminal domain FJN13_02980 PF00639 PPIC-type PPIASE domain FJN13_02985 PF04453 LPS transport system D FJN13_02985 PF03968 OstA-like protein FJN13_02990 PF00226 DnaJ domain FJN13_02990 PF05099 Tellurite resistance protein TerB FJN13_02995 PF02899 Phage integrase, N-terminal SAM-like domain FJN13_02995 PF00589 Phage integrase family FJN13_03000 PF13098 Thioredoxin-like domain FJN13_03000 PF10411 Disulfide bond isomerase protein N-terminus FJN13_03005 PF17768 RecJ OB domain FJN13_03005 PF02272 DHHA1 domain FJN13_03005 PF01368 DHH family FJN13_03015 PF11967 Recombination protein O N terminal FJN13_03015 PF02565 Recombination protein O C terminal FJN13_03020 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FJN13_03025 PF01648 4'-phosphopantetheinyl transferase superfamily FJN13_03030 PF05958 tRNA (Uracil-5-)-methyltransferase FJN13_03035 PF13291 ACT domain FJN13_03035 PF02824 TGS domain FJN13_03035 PF04607 Region found in RelA / SpoT proteins FJN13_03040 PF03819 MazG nucleotide pyrophosphohydrolase domain FJN13_03060 PF00572 Ribosomal protein L13 FJN13_03065 PF00380 Ribosomal protein S9/S16 FJN13_03070 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FJN13_03070 PF00355 Rieske [2Fe-2S] domain FJN13_03075 PF00033 Cytochrome b/b6/petB FJN13_03075 PF00032 Cytochrome b(C-terminal)/b6/petD FJN13_03080 PF02167 Cytochrome C1 family FJN13_03085 PF00043 Glutathione S-transferase, C-terminal domain FJN13_03085 PF02798 Glutathione S-transferase, N-terminal domain FJN13_03090 PF04386 Stringent starvation protein B FJN13_03105 PF00486 Transcriptional regulatory protein, C terminal FJN13_03105 PF00072 Response regulator receiver domain FJN13_03110 PF03448 MgtE intracellular N domain FJN13_03110 PF01769 Divalent cation transporter FJN13_03110 PF00571 CBS domain FJN13_03115 PF00381 PTS HPr component phosphorylation site FJN13_03120 PF03668 P-loop ATPase protein family FJN13_03125 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FJN13_03130 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FJN13_03135 PF00309 Sigma-54 factor, Activator interacting domain (AID) FJN13_03135 PF04552 Sigma-54, DNA binding domain FJN13_03135 PF04963 Sigma-54 factor, core binding domain FJN13_03140 PF00005 ABC transporter FJN13_03140 PF12399 Branched-chain amino acid ATP-binding cassette transporter FJN13_03145 PF03968 OstA-like protein FJN13_03160 PF00571 CBS domain FJN13_03160 PF01380 SIS domain FJN13_03165 PF01699 Sodium/calcium exchanger protein FJN13_03170 PF00005 ABC transporter FJN13_03175 PF02405 Permease MlaE FJN13_03180 PF02470 MlaD protein FJN13_03185 PF05494 MlaC protein FJN13_03195 PF01722 BolA-like protein FJN13_03200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FJN13_03205 PF13180 PDZ domain FJN13_03210 PF13180 PDZ domain FJN13_03210 PF00595 PDZ domain FJN13_03220 PF03969 AFG1-like ATPase FJN13_03225 PF01709 Transcriptional regulator FJN13_03240 PF00563 EAL domain FJN13_03240 PF00990 Diguanylate cyclase, GGDEF domain FJN13_03240 PF03707 Bacterial signalling protein N terminal repeat FJN13_03245 PF00881 Nitroreductase family FJN13_03255 PF02355 Protein export membrane protein FJN13_03255 PF07549 SecD/SecF GG Motif FJN13_03260 PF00999 Sodium/hydrogen exchanger family FJN13_03260 PF02080 TrkA-C domain FJN13_03260 PF03471 Transporter associated domain FJN13_03270 PF07715 TonB-dependent Receptor Plug Domain FJN13_03270 PF00593 TonB dependent receptor FJN13_03275 PF00892 EamA-like transporter family FJN13_03285 PF09308 LuxQ, periplasmic FJN13_03285 PF00072 Response regulator receiver domain FJN13_03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_03285 PF00512 His Kinase A (phospho-acceptor) domain FJN13_03290 PF13458 Periplasmic binding protein FJN13_03305 PF00438 S-adenosylmethionine synthetase, N-terminal domain FJN13_03305 PF02772 S-adenosylmethionine synthetase, central domain FJN13_03305 PF02773 S-adenosylmethionine synthetase, C-terminal domain FJN13_03310 PF02780 Transketolase, C-terminal domain FJN13_03310 PF02779 Transketolase, pyrimidine binding domain FJN13_03310 PF00456 Transketolase, thiamine diphosphate binding domain FJN13_03315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FJN13_03315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FJN13_03320 PF00162 Phosphoglycerate kinase FJN13_03325 PF00274 Fructose-bisphosphate aldolase class-I FJN13_03335 PF07676 WD40-like Beta Propeller Repeat FJN13_03335 PF00326 Prolyl oligopeptidase family FJN13_03340 PF02541 Ppx/GppA phosphatase family FJN13_03345 PF13089 Polyphosphate kinase N-terminal domain FJN13_03345 PF13090 Polyphosphate kinase C-terminal domain 2 FJN13_03345 PF02503 Polyphosphate kinase middle domain FJN13_03345 PF17941 Polyphosphate kinase C-terminal domain 1 FJN13_03355 PF00528 Binding-protein-dependent transport system inner membrane component FJN13_03360 PF00528 Binding-protein-dependent transport system inner membrane component FJN13_03365 PF00005 ABC transporter FJN13_03370 PF01895 PhoU domain FJN13_03375 PF01384 Phosphate transporter family FJN13_03385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_03385 PF03466 LysR substrate binding domain FJN13_03395 PF03006 Haemolysin-III related FJN13_03400 PF01047 MarR family FJN13_03405 PF02566 OsmC-like protein FJN13_03410 PF01433 Peptidase family M1 domain FJN13_03420 PF09186 Domain of unknown function (DUF1949) FJN13_03420 PF01205 Uncharacterized protein family UPF0029 FJN13_03430 PF08447 PAS fold FJN13_03430 PF13426 PAS domain FJN13_03430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_03440 PF03466 LysR substrate binding domain FJN13_03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_03445 PF00248 Aldo/keto reductase family FJN13_03455 PF00128 Alpha amylase, catalytic domain FJN13_03455 PF03714 Bacterial pullanase-associated domain FJN13_03455 PF02806 Alpha amylase, C-terminal all-beta domain FJN13_03460 PF00149 Calcineurin-like phosphoesterase FJN13_03460 PF12320 Type 5 capsule protein repressor C-terminal domain FJN13_03465 PF13476 AAA domain FJN13_03470 PF01223 DNA/RNA non-specific endonuclease FJN13_03475 PF00375 Sodium:dicarboxylate symporter family FJN13_03480 PF00491 Arginase family FJN13_03485 PF01979 Amidohydrolase family FJN13_03490 PF00392 Bacterial regulatory proteins, gntR family FJN13_03490 PF07702 UTRA domain FJN13_03495 PF17391 Urocanase N-terminal domain FJN13_03495 PF17392 Urocanase C-terminal domain FJN13_03495 PF01175 Urocanase Rossmann-like domain FJN13_03500 PF00221 Aromatic amino acid lyase FJN13_03525 PF00005 ABC transporter FJN13_03525 PF12848 ABC transporter FJN13_03550 PF00924 Mechanosensitive ion channel FJN13_03570 PF01936 NYN domain FJN13_03570 PF09722 Protein of unknown function (DUF2384) FJN13_03645 PF04172 LrgB-like family FJN13_03650 PF00072 Response regulator receiver domain FJN13_03675 PF06969 HemN C-terminal domain FJN13_03675 PF04055 Radical SAM superfamily FJN13_03680 PF01725 Ham1 family FJN13_03685 PF00271 Helicase conserved C-terminal domain FJN13_03685 PF00270 DEAD/DEAH box helicase FJN13_03690 PF12627 Probable RNA and SrmB- binding site of polymerase A FJN13_03690 PF01743 Poly A polymerase head domain FJN13_03695 PF13401 AAA domain FJN13_03695 PF01471 Putative peptidoglycan binding domain FJN13_03705 PF01966 HD domain FJN13_03705 PF11871 Domain of unknown function (DUF3391) FJN13_03710 PF00694 Aconitase C-terminal domain FJN13_03715 PF00330 Aconitase family (aconitate hydratase) FJN13_03720 PF00180 Isocitrate/isopropylmalate dehydrogenase FJN13_03725 PF08502 LeuA allosteric (dimerisation) domain FJN13_03725 PF00682 HMGL-like FJN13_03740 PF03952 Enolase, N-terminal domain FJN13_03740 PF00113 Enolase, C-terminal TIM barrel domain FJN13_03745 PF06418 CTP synthase N-terminus FJN13_03745 PF00117 Glutamine amidotransferase class-I FJN13_03750 PF01624 MutS domain I FJN13_03750 PF05190 MutS family domain IV FJN13_03750 PF05192 MutS domain III FJN13_03750 PF05188 MutS domain II FJN13_03750 PF00488 MutS domain V FJN13_03755 PF02464 Competence-damaged protein FJN13_03760 PF00154 recA bacterial DNA recombination protein FJN13_03765 PF00005 ABC transporter FJN13_03770 PF12679 ABC-2 family transporter protein FJN13_03775 PF00512 His Kinase A (phospho-acceptor) domain FJN13_03775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_03775 PF00672 HAMP domain FJN13_03780 PF00486 Transcriptional regulatory protein, C terminal FJN13_03780 PF00072 Response regulator receiver domain FJN13_03810 PF00005 ABC transporter FJN13_03815 PF03379 CcmB protein FJN13_03820 PF01578 Cytochrome C assembly protein FJN13_03825 PF04995 Heme exporter protein D (CcmD) FJN13_03830 PF03100 CcmE FJN13_03835 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FJN13_03835 PF01578 Cytochrome C assembly protein FJN13_03840 PF08534 Redoxin FJN13_03845 PF03918 Cytochrome C biogenesis protein FJN13_03855 PF04333 MlaA lipoprotein FJN13_03860 PF16363 GDP-mannose 4,6 dehydratase FJN13_03870 PF00854 POT family FJN13_03880 PF00005 ABC transporter FJN13_03900 PF00953 Glycosyl transferase family 4 FJN13_03915 PF00483 Nucleotidyl transferase FJN13_03920 PF10531 SLBB domain FJN13_03925 PF18324 Hypothetical protein TT1725 FJN13_03925 PF00180 Isocitrate/isopropylmalate dehydrogenase FJN13_03940 PF03641 Possible lysine decarboxylase FJN13_03940 PF11892 Domain of unknown function (DUF3412) FJN13_03940 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FJN13_03945 PF00072 Response regulator receiver domain FJN13_03945 PF00990 Diguanylate cyclase, GGDEF domain FJN13_03950 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FJN13_03950 PF14489 QueF-like protein FJN13_03955 PF07348 Syd protein (SUKH-2) FJN13_03990 PF00849 RNA pseudouridylate synthase FJN13_03995 PF00258 Flavodoxin FJN13_04000 PF00132 Bacterial transferase hexapeptide (six repeats) FJN13_04000 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FJN13_04000 PF14602 Hexapeptide repeat of succinyl-transferase FJN13_04005 PF01966 HD domain FJN13_04005 PF01909 Nucleotidyltransferase domain FJN13_04005 PF08335 GlnD PII-uridylyltransferase FJN13_04010 PF00557 Metallopeptidase family M24 FJN13_04015 PF00318 Ribosomal protein S2 FJN13_04020 PF00889 Elongation factor TS FJN13_04025 PF00696 Amino acid kinase family FJN13_04030 PF01765 Ribosome recycling factor FJN13_04035 PF01255 Putative undecaprenyl diphosphate synthase FJN13_04045 PF13288 DXP reductoisomerase C-terminal domain FJN13_04045 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FJN13_04045 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FJN13_04050 PF17820 PDZ domain FJN13_04050 PF02163 Peptidase family M50 FJN13_04055 PF01103 Surface antigen FJN13_04055 PF07244 Surface antigen variable number repeat FJN13_04060 PF03938 Outer membrane protein (OmpH-like) FJN13_04065 PF07977 FabA-like domain FJN13_04070 PF00132 Bacterial transferase hexapeptide (six repeats) FJN13_04070 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FJN13_04075 PF02684 Lipid-A-disaccharide synthetase FJN13_04080 PF01351 Ribonuclease HII FJN13_04085 PF02811 PHP domain FJN13_04085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJN13_04085 PF01336 OB-fold nucleic acid binding domain FJN13_04085 PF14579 Helix-hairpin-helix motif FJN13_04085 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJN13_04090 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FJN13_04095 PF11734 TilS substrate C-terminal domain FJN13_04095 PF09179 TilS substrate binding domain FJN13_04095 PF01171 PP-loop family FJN13_04100 PF00563 EAL domain FJN13_04100 PF03707 Bacterial signalling protein N terminal repeat FJN13_04100 PF00990 Diguanylate cyclase, GGDEF domain FJN13_04105 PF02254 TrkA-N domain FJN13_04105 PF00999 Sodium/hydrogen exchanger family FJN13_04105 PF02080 TrkA-C domain FJN13_04115 PF14437 MafB19-like deaminase FJN13_04120 PF01464 Transglycosylase SLT domain FJN13_04120 PF00497 Bacterial extracellular solute-binding proteins, family 3 FJN13_04125 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FJN13_04125 PF02769 AIR synthase related protein, C-terminal domain FJN13_04125 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FJN13_04130 PF01713 Smr domain FJN13_04145 PF00691 OmpA family FJN13_04145 PF05736 OprF membrane domain FJN13_04150 PF03412 Peptidase C39 family FJN13_04150 PF00005 ABC transporter FJN13_04150 PF00664 ABC transporter transmembrane region FJN13_04155 PF00529 HlyD membrane-fusion protein of T1SS FJN13_04155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJN13_04160 PF00196 Bacterial regulatory proteins, luxR family FJN13_04160 PF00072 Response regulator receiver domain FJN13_04200 PF01584 CheW-like domain FJN13_04200 PF00072 Response regulator receiver domain FJN13_04205 PF01739 CheR methyltransferase, SAM binding domain FJN13_04205 PF03705 CheR methyltransferase, all-alpha domain FJN13_04210 PF00460 Flagella basal body rod protein FJN13_04215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FJN13_04215 PF00460 Flagella basal body rod protein FJN13_04220 PF13860 FlgD Ig-like domain FJN13_04220 PF03963 Flagellar hook capping protein - N-terminal region FJN13_04220 PF13861 FlgD Tudor-like domain FJN13_04225 PF07559 Flagellar basal body protein FlaE FJN13_04225 PF00460 Flagella basal body rod protein FJN13_04225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FJN13_04230 PF00460 Flagella basal body rod protein FJN13_04230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FJN13_04235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FJN13_04235 PF00460 Flagella basal body rod protein FJN13_04240 PF02107 Flagellar L-ring protein FJN13_04245 PF02119 Flagellar P-ring protein FJN13_04250 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FJN13_04250 PF10135 Rod binding protein FJN13_04270 PF00669 Bacterial flagellin N-terminal helical region FJN13_04270 PF07196 Flagellin hook IN motif FJN13_04270 PF00700 Bacterial flagellin C-terminal helical region FJN13_04275 PF07196 Flagellin hook IN motif FJN13_04275 PF00700 Bacterial flagellin C-terminal helical region FJN13_04275 PF00669 Bacterial flagellin N-terminal helical region FJN13_04280 PF00700 Bacterial flagellin C-terminal helical region FJN13_04280 PF07196 Flagellin hook IN motif FJN13_04280 PF00669 Bacterial flagellin N-terminal helical region FJN13_04285 PF03646 FlaG protein FJN13_04290 PF07196 Flagellin hook IN motif FJN13_04290 PF02465 Flagellar hook-associated protein 2 N-terminus FJN13_04290 PF07195 Flagellar hook-associated protein 2 C-terminus FJN13_04295 PF02561 Flagellar protein FliS FJN13_04310 PF00535 Glycosyl transferase family 2 FJN13_04315 PF00535 Glycosyl transferase family 2 FJN13_04320 PF16363 GDP-mannose 4,6 dehydratase FJN13_04325 PF01370 NAD dependent epimerase/dehydratase family FJN13_04335 PF05721 Phytanoyl-CoA dioxygenase (PhyH) FJN13_04340 PF00534 Glycosyl transferases group 1 FJN13_04340 PF13439 Glycosyltransferase Family 4 FJN13_04345 PF06463 Molybdenum Cofactor Synthesis C FJN13_04345 PF04055 Radical SAM superfamily FJN13_04350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FJN13_04355 PF02719 Polysaccharide biosynthesis protein FJN13_04370 PF04991 LicD family FJN13_04375 PF03102 NeuB family FJN13_04375 PF08666 SAF domain FJN13_04385 PF02348 Cytidylyltransferase FJN13_04390 PF01467 Cytidylyltransferase-like FJN13_04395 PF00700 Bacterial flagellin C-terminal helical region FJN13_04395 PF00669 Bacterial flagellin N-terminal helical region FJN13_04400 PF00158 Sigma-54 interaction domain FJN13_04400 PF02954 Bacterial regulatory protein, Fis family FJN13_04400 PF00072 Response regulator receiver domain FJN13_04405 PF00512 His Kinase A (phospho-acceptor) domain FJN13_04405 PF00989 PAS fold FJN13_04405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_04410 PF02954 Bacterial regulatory protein, Fis family FJN13_04410 PF00158 Sigma-54 interaction domain FJN13_04415 PF02049 Flagellar hook-basal body complex protein FliE FJN13_04420 PF01514 Secretory protein of YscJ/FliF family FJN13_04420 PF08345 Flagellar M-ring protein C-terminal FJN13_04425 PF01706 FliG C-terminal domain FJN13_04425 PF14841 FliG middle domain FJN13_04425 PF14842 FliG N-terminal domain FJN13_04435 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FJN13_04435 PF18269 T3SS EscN ATPase C-terminal domain FJN13_04455 PF02154 Flagellar motor switch protein FliM FJN13_04455 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FJN13_04460 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FJN13_04465 PF04347 Flagellar biosynthesis protein, FliO FJN13_04470 PF00813 FliP family FJN13_04475 PF01313 Bacterial export proteins, family 3 FJN13_04480 PF01311 Bacterial export proteins, family 1 FJN13_04485 PF01312 FlhB HrpN YscU SpaS Family FJN13_04490 PF00771 FHIPEP family FJN13_04495 PF00448 SRP54-type protein, GTPase domain FJN13_04500 PF10609 NUBPL iron-transfer P-loop NTPase FJN13_04505 PF04539 Sigma-70 region 3 FJN13_04505 PF04542 Sigma-70 region 2 FJN13_04505 PF04545 Sigma-70, region 4 FJN13_04510 PF00072 Response regulator receiver domain FJN13_04515 PF04344 Chemotaxis phosphatase, CheZ FJN13_04520 PF02895 Signal transducing histidine kinase, homodimeric domain FJN13_04520 PF01627 Hpt domain FJN13_04520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_04520 PF01584 CheW-like domain FJN13_04520 PF07194 P2 response regulator binding domain FJN13_04525 PF00072 Response regulator receiver domain FJN13_04525 PF01339 CheB methylesterase FJN13_04530 PF13614 AAA domain FJN13_04540 PF01584 CheW-like domain FJN13_04550 PF04204 Homoserine O-succinyltransferase FJN13_04555 PF02574 Homocysteine S-methyltransferase FJN13_04555 PF02310 B12 binding domain FJN13_04555 PF02965 Vitamin B12 dependent methionine synthase, activation domain FJN13_04555 PF02607 B12 binding domain FJN13_04555 PF00809 Pterin binding enzyme FJN13_04560 PF02310 B12 binding domain FJN13_04560 PF02607 B12 binding domain FJN13_04560 PF02965 Vitamin B12 dependent methionine synthase, activation domain FJN13_04560 PF00809 Pterin binding enzyme FJN13_04560 PF02574 Homocysteine S-methyltransferase FJN13_04570 PF06865 Pyrimidine/purine nucleoside phosphorylase FJN13_04575 PF00672 HAMP domain FJN13_04575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_04575 PF02743 Cache domain FJN13_04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_04580 PF03466 LysR substrate binding domain FJN13_04585 PF03466 LysR substrate binding domain FJN13_04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_04590 PF00484 Carbonic anhydrase FJN13_04595 PF00916 Sulfate permease family FJN13_04595 PF01740 STAS domain FJN13_04605 PF13977 BetI-type transcriptional repressor, C-terminal FJN13_04605 PF00440 Bacterial regulatory proteins, tetR family FJN13_04610 PF05649 Peptidase family M13 FJN13_04610 PF01431 Peptidase family M13 FJN13_04620 PF02631 RecX family FJN13_04625 PF02272 DHHA1 domain FJN13_04625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FJN13_04625 PF01411 tRNA synthetases class II (A) FJN13_04630 PF02599 Global regulator protein family FJN13_04655 PF02436 Conserved carboxylase domain FJN13_04655 PF00364 Biotin-requiring enzyme FJN13_04655 PF00682 HMGL-like FJN13_04660 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FJN13_04665 PF00005 ABC transporter FJN13_04670 PF00005 ABC transporter FJN13_04670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FJN13_04675 PF12911 N-terminal TM domain of oligopeptide transport permease C FJN13_04675 PF00528 Binding-protein-dependent transport system inner membrane component FJN13_04680 PF00528 Binding-protein-dependent transport system inner membrane component FJN13_04685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FJN13_04690 PF00158 Sigma-54 interaction domain FJN13_04690 PF02954 Bacterial regulatory protein, Fis family FJN13_04695 PF04012 PspA/IM30 family FJN13_04710 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FJN13_04715 PF18024 Helix-turn-helix domain FJN13_04715 PF00158 Sigma-54 interaction domain FJN13_04725 PF02798 Glutathione S-transferase, N-terminal domain FJN13_04725 PF14497 Glutathione S-transferase, C-terminal domain FJN13_04730 PF01037 Lrp/AsnC ligand binding domain FJN13_04735 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FJN13_04735 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FJN13_04750 PF03301 Tryptophan 2,3-dioxygenase FJN13_04755 PF00593 TonB dependent receptor FJN13_04760 PF00593 TonB dependent receptor FJN13_04760 PF07715 TonB-dependent Receptor Plug Domain FJN13_04795 PF01618 MotA/TolQ/ExbB proton channel family FJN13_04800 PF01618 MotA/TolQ/ExbB proton channel family FJN13_04805 PF02472 Biopolymer transport protein ExbD/TolR FJN13_04810 PF03544 Gram-negative bacterial TonB protein C-terminal FJN13_04820 PF08351 Domain of unknown function (DUF1726) FJN13_04820 PF05127 Helicase FJN13_04820 PF17176 tRNA-binding domain FJN13_04820 PF13718 GNAT acetyltransferase 2 FJN13_04845 PF01636 Phosphotransferase enzyme family FJN13_04860 PF00583 Acetyltransferase (GNAT) family FJN13_04875 PF03466 LysR substrate binding domain FJN13_04875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_04880 PF07690 Major Facilitator Superfamily FJN13_04885 PF00296 Luciferase-like monooxygenase FJN13_04890 PF00248 Aldo/keto reductase family FJN13_04900 PF05230 MASE2 domain FJN13_04900 PF00990 Diguanylate cyclase, GGDEF domain FJN13_04905 PF16658 Class II release factor RF3, C-terminal domain FJN13_04905 PF00009 Elongation factor Tu GTP binding domain FJN13_04905 PF03144 Elongation factor Tu domain 2 FJN13_04910 PF05746 DALR anticodon binding domain FJN13_04910 PF03485 Arginyl tRNA synthetase N terminal domain FJN13_04910 PF00750 tRNA synthetases class I (R) FJN13_04930 PF00291 Pyridoxal-phosphate dependent enzyme FJN13_04955 PF00487 Fatty acid desaturase FJN13_04960 PF00042 Globin FJN13_04960 PF00970 Oxidoreductase FAD-binding domain FJN13_04960 PF00175 Oxidoreductase NAD-binding domain FJN13_04975 PF01336 OB-fold nucleic acid binding domain FJN13_04975 PF00152 tRNA synthetases class II (D, K and N) FJN13_04980 PF02558 Ketopantoate reductase PanE/ApbA FJN13_04980 PF08546 Ketopantoate reductase PanE/ApbA C terminal FJN13_04985 PF00849 RNA pseudouridylate synthase FJN13_04995 PF00675 Insulinase (Peptidase family M16) FJN13_04995 PF05193 Peptidase M16 inactive domain FJN13_05000 PF04262 Glutamate-cysteine ligase FJN13_05020 PF01713 Smr domain FJN13_05025 PF05175 Methyltransferase small domain FJN13_05030 PF01264 Chorismate synthase FJN13_05040 PF04293 SpoVR like protein FJN13_05045 PF04285 Protein of unknown function (DUF444) FJN13_05050 PF08298 PrkA AAA domain FJN13_05050 PF06798 PrkA serine protein kinase C-terminal domain FJN13_05060 PF00462 Glutaredoxin FJN13_05065 PF07715 TonB-dependent Receptor Plug Domain FJN13_05065 PF00593 TonB dependent receptor FJN13_05085 PF04324 BFD-like [2Fe-2S] binding domain FJN13_05090 PF00578 AhpC/TSA family FJN13_05090 PF10417 C-terminal domain of 1-Cys peroxiredoxin FJN13_05095 PF00929 Exonuclease FJN13_05100 PF18393 MotY N-terminal domain FJN13_05100 PF00691 OmpA family FJN13_05105 PF03009 Glycerophosphoryl diester phosphodiesterase family FJN13_05110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FJN13_05115 PF00313 'Cold-shock' DNA-binding domain FJN13_05125 PF02225 PA domain FJN13_05125 PF04389 Peptidase family M28 FJN13_05135 PF00633 Helix-hairpin-helix motif FJN13_05135 PF00730 HhH-GPD superfamily base excision DNA repair protein FJN13_05140 PF02508 Rnf-Nqr subunit, membrane protein FJN13_05145 PF04205 FMN-binding domain FJN13_05150 PF03116 NQR2, RnfD, RnfE family FJN13_05155 PF13375 RnfC Barrel sandwich hybrid domain FJN13_05155 PF12838 4Fe-4S dicluster domain FJN13_05155 PF10531 SLBB domain FJN13_05155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FJN13_05160 PF04060 Putative Fe-S cluster FJN13_05180 PF01554 MatE FJN13_05185 PF17757 UvrB interaction domain FJN13_05185 PF12344 Ultra-violet resistance protein B FJN13_05185 PF02151 UvrB/uvrC motif FJN13_05185 PF04851 Type III restriction enzyme, res subunit FJN13_05185 PF00271 Helicase conserved C-terminal domain FJN13_05195 PF06508 Queuosine biosynthesis protein QueC FJN13_05200 PF04055 Radical SAM superfamily FJN13_05210 PF13537 Glutamine amidotransferase domain FJN13_05210 PF00733 Asparagine synthase FJN13_05235 PF03600 Citrate transporter FJN13_05235 PF02080 TrkA-C domain FJN13_05240 PF00009 Elongation factor Tu GTP binding domain FJN13_05245 PF00459 Inositol monophosphatase family FJN13_05255 PF01507 Phosphoadenosine phosphosulfate reductase family FJN13_05260 PF00474 Sodium:solute symporter family FJN13_05265 PF17158 Membrane-associated sensor, integral membrane domain FJN13_05265 PF00990 Diguanylate cyclase, GGDEF domain FJN13_05275 PF04542 Sigma-70 region 2 FJN13_05275 PF08281 Sigma-70, region 4 FJN13_05290 PF00092 von Willebrand factor type A domain FJN13_05290 PF07584 Aerotolerance regulator N-terminal FJN13_05295 PF00092 von Willebrand factor type A domain FJN13_05305 PF01882 Protein of unknown function DUF58 FJN13_05310 PF07726 ATPase family associated with various cellular activities (AAA) FJN13_05310 PF17863 AAA lid domain FJN13_05315 PF00108 Thiolase, N-terminal domain FJN13_05315 PF02803 Thiolase, C-terminal domain FJN13_05320 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FJN13_05320 PF00378 Enoyl-CoA hydratase/isomerase FJN13_05320 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FJN13_05330 PF03707 Bacterial signalling protein N terminal repeat FJN13_05330 PF00563 EAL domain FJN13_05330 PF00990 Diguanylate cyclase, GGDEF domain FJN13_05335 PF00675 Insulinase (Peptidase family M16) FJN13_05335 PF05193 Peptidase M16 inactive domain FJN13_05340 PF00300 Histidine phosphatase superfamily (branch 1) FJN13_05350 PF00571 CBS domain FJN13_05350 PF01595 Cyclin M transmembrane N-terminal domain FJN13_05350 PF03471 Transporter associated domain FJN13_05355 PF01578 Cytochrome C assembly protein FJN13_05360 PF00448 SRP54-type protein, GTPase domain FJN13_05360 PF02881 SRP54-type protein, helical bundle domain FJN13_05360 PF02978 Signal peptide binding domain FJN13_05400 PF00873 AcrB/AcrD/AcrF family FJN13_05405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJN13_05410 PF00005 ABC transporter FJN13_05410 PF00664 ABC transporter transmembrane region FJN13_05425 PF00886 Ribosomal protein S16 FJN13_05430 PF01782 RimM N-terminal domain FJN13_05430 PF05239 PRC-barrel domain FJN13_05435 PF01746 tRNA (Guanine-1)-methyltransferase FJN13_05440 PF01245 Ribosomal protein L19 FJN13_05445 PF03458 UPF0126 domain FJN13_05450 PF00378 Enoyl-CoA hydratase/isomerase FJN13_05455 PF00793 DAHP synthetase I family FJN13_05460 PF02153 Prephenate dehydrogenase FJN13_05460 PF01817 Chorismate mutase type II FJN13_05465 PF00800 Prephenate dehydratase FJN13_05465 PF01817 Chorismate mutase type II FJN13_05470 PF00072 Response regulator receiver domain FJN13_05475 PF01253 Translation initiation factor SUI1 FJN13_05485 PF00486 Transcriptional regulatory protein, C terminal FJN13_05485 PF00072 Response regulator receiver domain FJN13_05495 PF03707 Bacterial signalling protein N terminal repeat FJN13_05495 PF00990 Diguanylate cyclase, GGDEF domain FJN13_05495 PF00563 EAL domain FJN13_05505 PF00512 His Kinase A (phospho-acceptor) domain FJN13_05505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_05515 PF00072 Response regulator receiver domain FJN13_05515 PF00158 Sigma-54 interaction domain FJN13_05520 PF00669 Bacterial flagellin N-terminal helical region FJN13_05520 PF07196 Flagellin hook IN motif FJN13_05520 PF00700 Bacterial flagellin C-terminal helical region FJN13_05535 PF01336 OB-fold nucleic acid binding domain FJN13_05535 PF00152 tRNA synthetases class II (D, K and N) FJN13_05535 PF02938 GAD domain FJN13_05540 PF00293 NUDIX domain FJN13_05545 PF02075 Crossover junction endodeoxyribonuclease RuvC FJN13_05555 PF17864 RuvB AAA lid domain FJN13_05555 PF05491 RuvB C-terminal winged helix domain FJN13_05555 PF05496 Holliday junction DNA helicase RuvB P-loop domain FJN13_05560 PF03061 Thioesterase superfamily FJN13_05565 PF01618 MotA/TolQ/ExbB proton channel family FJN13_05570 PF02472 Biopolymer transport protein ExbD/TolR FJN13_05580 PF07676 WD40-like Beta Propeller Repeat FJN13_05580 PF04052 TolB amino-terminal domain FJN13_05585 PF00691 OmpA family FJN13_05590 PF16331 TolA binding protein trimerisation FJN13_05590 PF13174 Tetratricopeptide repeat FJN13_05610 PF02445 Quinolinate synthetase A protein FJN13_05625 PF01734 Patatin-like phospholipase FJN13_05630 PF02558 Ketopantoate reductase PanE/ApbA FJN13_05630 PF08546 Ketopantoate reductase PanE/ApbA C terminal FJN13_05640 PF02774 Semialdehyde dehydrogenase, dimerisation domain FJN13_05640 PF01118 Semialdehyde dehydrogenase, NAD binding domain FJN13_05645 PF00106 short chain dehydrogenase FJN13_05650 PF01292 Prokaryotic cytochrome b561 FJN13_05665 PF03707 Bacterial signalling protein N terminal repeat FJN13_05665 PF00990 Diguanylate cyclase, GGDEF domain FJN13_05665 PF00563 EAL domain FJN13_05680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_05680 PF03466 LysR substrate binding domain FJN13_05685 PF08240 Alcohol dehydrogenase GroES-like domain FJN13_05685 PF00107 Zinc-binding dehydrogenase FJN13_05690 PF01863 Protein of unknown function DUF45 FJN13_05695 PF00873 AcrB/AcrD/AcrF family FJN13_05705 PF08361 MAATS-type transcriptional repressor, C-terminal region FJN13_05705 PF00440 Bacterial regulatory proteins, tetR family FJN13_05710 PF07715 TonB-dependent Receptor Plug Domain FJN13_05710 PF00593 TonB dependent receptor FJN13_05720 PF00873 AcrB/AcrD/AcrF family FJN13_05730 PF00990 Diguanylate cyclase, GGDEF domain FJN13_05740 PF02470 MlaD protein FJN13_05745 PF04403 Paraquat-inducible protein A FJN13_05760 PF00106 short chain dehydrogenase FJN13_05765 PF06719 AraC-type transcriptional regulator N-terminus FJN13_05765 PF12833 Helix-turn-helix domain FJN13_05770 PF00152 tRNA synthetases class II (D, K and N) FJN13_05770 PF01336 OB-fold nucleic acid binding domain FJN13_05780 PF01699 Sodium/calcium exchanger protein FJN13_05785 PF18030 RimK PreATP-grasp domain FJN13_05785 PF08443 RimK-like ATP-grasp domain FJN13_05805 PF00202 Aminotransferase class-III FJN13_05810 PF06968 Biotin and Thiamin Synthesis associated domain FJN13_05810 PF04055 Radical SAM superfamily FJN13_05815 PF00155 Aminotransferase class I and II FJN13_05830 PF03575 Peptidase family S51 FJN13_05835 PF01451 Low molecular weight phosphotyrosine protein phosphatase FJN13_05840 PF01032 FecCD transport family FJN13_05845 PF00005 ABC transporter FJN13_05850 PF01474 Class-II DAHP synthetase family FJN13_05865 PF00005 ABC transporter FJN13_05865 PF00664 ABC transporter transmembrane region FJN13_05870 PF06463 Molybdenum Cofactor Synthesis C FJN13_05870 PF04055 Radical SAM superfamily FJN13_05880 PF00072 Response regulator receiver domain FJN13_05880 PF00486 Transcriptional regulatory protein, C terminal FJN13_05900 PF00749 tRNA synthetases class I (E and Q), catalytic domain FJN13_05940 PF01207 Dihydrouridine synthase (Dus) FJN13_05955 PF13472 GDSL-like Lipase/Acylhydrolase family FJN13_05960 PF00005 ABC transporter FJN13_05970 PF08338 Domain of unknown function (DUF1731) FJN13_05970 PF01370 NAD dependent epimerase/dehydratase family FJN13_05975 PF02152 Dihydroneopterin aldolase FJN13_05980 PF01594 AI-2E family transporter FJN13_05985 PF08918 PhoQ Sensor FJN13_05985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_05990 PF00486 Transcriptional regulatory protein, C terminal FJN13_05990 PF00072 Response regulator receiver domain FJN13_06005 PF03795 YCII-related domain FJN13_06010 PF00290 Tryptophan synthase alpha chain FJN13_06015 PF00291 Pyridoxal-phosphate dependent enzyme FJN13_06020 PF00218 Indole-3-glycerol phosphate synthase FJN13_06020 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FJN13_06025 PF02885 Glycosyl transferase family, helical bundle domain FJN13_06025 PF00591 Glycosyl transferase family, a/b domain FJN13_06030 PF00117 Glutamine amidotransferase class-I FJN13_06035 PF00425 chorismate binding enzyme FJN13_06035 PF04715 Anthranilate synthase component I, N terminal region FJN13_06040 PF02811 PHP domain FJN13_06045 PF01300 Telomere recombination FJN13_06050 PF02616 Segregation and condensation protein ScpA FJN13_06055 PF04079 Segregation and condensation complex subunit ScpB FJN13_06060 PF00849 RNA pseudouridylate synthase FJN13_06060 PF01479 S4 domain FJN13_06065 PF00248 Aldo/keto reductase family FJN13_06070 PF12464 Maltose acetyltransferase FJN13_06070 PF14602 Hexapeptide repeat of succinyl-transferase FJN13_06080 PF04286 Protein of unknown function (DUF445) FJN13_06095 PF00005 ABC transporter FJN13_06095 PF00664 ABC transporter transmembrane region FJN13_06100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJN13_06100 PF00529 HlyD membrane-fusion protein of T1SS FJN13_06105 PF05724 Thiopurine S-methyltransferase (TPMT) FJN13_06110 PF04355 SmpA / OmlA family FJN13_06115 PF02463 RecF/RecN/SMC N terminal domain FJN13_06120 PF00210 Ferritin-like domain FJN13_06130 PF00465 Iron-containing alcohol dehydrogenase FJN13_06145 PF00561 alpha/beta hydrolase fold FJN13_06155 PF00593 TonB dependent receptor FJN13_06155 PF07715 TonB-dependent Receptor Plug Domain FJN13_06160 PF00196 Bacterial regulatory proteins, luxR family FJN13_06160 PF00072 Response regulator receiver domain FJN13_06170 PF00989 PAS fold FJN13_06170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_06170 PF00512 His Kinase A (phospho-acceptor) domain FJN13_06180 PF01025 GrpE FJN13_06185 PF00012 Hsp70 protein FJN13_06190 PF00684 DnaJ central domain FJN13_06190 PF01556 DnaJ C terminal domain FJN13_06190 PF00226 DnaJ domain FJN13_06195 PF01322 Cytochrome C' FJN13_06205 PF13193 AMP-binding enzyme C-terminal domain FJN13_06205 PF00501 AMP-binding enzyme FJN13_06205 PF16177 Acetyl-coenzyme A synthetase N-terminus FJN13_06215 PF01113 Dihydrodipicolinate reductase, N-terminus FJN13_06215 PF05173 Dihydrodipicolinate reductase, C-terminus FJN13_06220 PF00117 Glutamine amidotransferase class-I FJN13_06220 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FJN13_06225 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FJN13_06225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FJN13_06225 PF02142 MGS-like domain FJN13_06230 PF03449 Transcription elongation factor, N-terminal FJN13_06230 PF01272 Transcription elongation factor, GreA/GreB, C-term FJN13_06245 PF00011 Hsp20/alpha crystallin family FJN13_06250 PF00871 Acetokinase family FJN13_06255 PF07085 DRTGG domain FJN13_06255 PF01515 Phosphate acetyl/butaryl transferase FJN13_06270 PF00795 Carbon-nitrogen hydrolase FJN13_06275 PF03471 Transporter associated domain FJN13_06275 PF00571 CBS domain FJN13_06280 PF02130 Uncharacterized protein family UPF0054 FJN13_06285 PF02562 PhoH-like protein FJN13_06290 PF01938 TRAM domain FJN13_06290 PF00919 Uncharacterized protein family UPF0004 FJN13_06290 PF04055 Radical SAM superfamily FJN13_06295 PF01494 FAD binding domain FJN13_06320 PF07715 TonB-dependent Receptor Plug Domain FJN13_06320 PF00593 TonB dependent receptor FJN13_06325 PF03061 Thioesterase superfamily FJN13_06330 PF01613 Flavin reductase like domain FJN13_06340 PF01235 Sodium:alanine symporter family FJN13_06385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FJN13_06390 PF01926 50S ribosome-binding GTPase FJN13_06390 PF06071 Protein of unknown function (DUF933) FJN13_06395 PF01195 Peptidyl-tRNA hydrolase FJN13_06400 PF01386 Ribosomal L25p family FJN13_06400 PF14693 Ribosomal protein TL5, C-terminal domain FJN13_06405 PF08240 Alcohol dehydrogenase GroES-like domain FJN13_06405 PF00107 Zinc-binding dehydrogenase FJN13_06420 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FJN13_06420 PF14572 Phosphoribosyl synthetase-associated domain FJN13_06430 PF08544 GHMP kinases C terminal FJN13_06430 PF00288 GHMP kinases N terminal domain FJN13_06435 PF03550 Outer membrane lipoprotein LolB FJN13_06440 PF01488 Shikimate / quinate 5-dehydrogenase FJN13_06440 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FJN13_06440 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FJN13_06445 PF03462 PCRF domain FJN13_06445 PF00472 RF-1 domain FJN13_06450 PF17827 PrmC N-terminal domain FJN13_06450 PF13847 Methyltransferase domain FJN13_06455 PF11849 Domain of unknown function (DUF3369) FJN13_06460 PF04247 Invasion gene expression up-regulator, SirB FJN13_06475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_06475 PF03466 LysR substrate binding domain FJN13_06485 PF04241 Protein of unknown function (DUF423) FJN13_06490 PF18125 RlmM ferredoxin-like domain FJN13_06490 PF01728 FtsJ-like methyltransferase FJN13_06495 PF00679 Elongation factor G C-terminus FJN13_06495 PF03144 Elongation factor Tu domain 2 FJN13_06495 PF00009 Elongation factor Tu GTP binding domain FJN13_06495 PF14492 Elongation Factor G, domain II FJN13_06495 PF03764 Elongation factor G, domain IV FJN13_06500 PF02560 Cyanate lyase C-terminal domain FJN13_06505 PF00069 Protein kinase domain FJN13_06510 PF01226 Formate/nitrite transporter FJN13_06515 PF11992 Domain of unknown function (DUF3488) FJN13_06515 PF13559 Domain of unknown function (DUF4129) FJN13_06515 PF01841 Transglutaminase-like superfamily FJN13_06525 PF07726 ATPase family associated with various cellular activities (AAA) FJN13_06525 PF17863 AAA lid domain FJN13_06530 PF03925 SeqA protein C-terminal domain FJN13_06530 PF17206 SeqA protein N-terminal domain FJN13_06535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FJN13_06535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FJN13_06535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FJN13_06535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FJN13_06540 PF00343 Carbohydrate phosphorylase FJN13_06545 PF03707 Bacterial signalling protein N terminal repeat FJN13_06545 PF00990 Diguanylate cyclase, GGDEF domain FJN13_06545 PF00563 EAL domain FJN13_06550 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FJN13_06560 PF01906 Putative heavy-metal-binding FJN13_06565 PF00375 Sodium:dicarboxylate symporter family FJN13_06580 PF01546 Peptidase family M20/M25/M40 FJN13_06580 PF07687 Peptidase dimerisation domain FJN13_06585 PF03960 ArsC family FJN13_06590 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FJN13_06605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FJN13_06610 PF04209 homogentisate 1,2-dioxygenase FJN13_06630 PF12327 FtsZ family, C-terminal domain FJN13_06630 PF00091 Tubulin/FtsZ family, GTPase domain FJN13_06640 PF03707 Bacterial signalling protein N terminal repeat FJN13_06640 PF00990 Diguanylate cyclase, GGDEF domain FJN13_06640 PF00563 EAL domain FJN13_06645 PF00563 EAL domain FJN13_06645 PF03707 Bacterial signalling protein N terminal repeat FJN13_06645 PF00990 Diguanylate cyclase, GGDEF domain FJN13_06650 PF00873 AcrB/AcrD/AcrF family FJN13_06660 PF00999 Sodium/hydrogen exchanger family FJN13_06660 PF02254 TrkA-N domain FJN13_06665 PF02525 Flavodoxin-like fold FJN13_06675 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FJN13_06680 PF01799 [2Fe-2S] binding domain FJN13_06680 PF00111 2Fe-2S iron-sulfur cluster binding domain FJN13_06685 PF01638 HxlR-like helix-turn-helix FJN13_06690 PF08448 PAS fold FJN13_06690 PF00563 EAL domain FJN13_06690 PF00990 Diguanylate cyclase, GGDEF domain FJN13_06690 PF13426 PAS domain FJN13_06690 PF05231 MASE1 FJN13_06690 PF08447 PAS fold FJN13_06700 PF01979 Amidohydrolase family FJN13_06705 PF00576 HIUase/Transthyretin family FJN13_06720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FJN13_06720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FJN13_06725 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FJN13_06725 PF00111 2Fe-2S iron-sulfur cluster binding domain FJN13_06725 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FJN13_06725 PF01799 [2Fe-2S] binding domain FJN13_06730 PF00440 Bacterial regulatory proteins, tetR family FJN13_06730 PF08362 YcdC-like protein, C-terminal region FJN13_06745 PF00860 Permease family FJN13_06750 PF00962 Adenosine/AMP deaminase FJN13_06760 PF03707 Bacterial signalling protein N terminal repeat FJN13_06760 PF00990 Diguanylate cyclase, GGDEF domain FJN13_06760 PF00563 EAL domain FJN13_06765 PF00360 Phytochrome region FJN13_06765 PF01590 GAF domain FJN13_06765 PF00563 EAL domain FJN13_06765 PF00990 Diguanylate cyclase, GGDEF domain FJN13_06770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_06770 PF00512 His Kinase A (phospho-acceptor) domain FJN13_06770 PF09308 LuxQ, periplasmic FJN13_06770 PF00072 Response regulator receiver domain FJN13_06780 PF00593 TonB dependent receptor FJN13_06780 PF07715 TonB-dependent Receptor Plug Domain FJN13_06785 PF00860 Permease family FJN13_06795 PF01546 Peptidase family M20/M25/M40 FJN13_06795 PF07687 Peptidase dimerisation domain FJN13_06800 PF00266 Aminotransferase class-V FJN13_06805 PF01925 Sulfite exporter TauE/SafE FJN13_06815 PF01425 Amidase FJN13_06855 PF03129 Anticodon binding domain FJN13_06855 PF02824 TGS domain FJN13_06855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FJN13_06855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FJN13_06860 PF00707 Translation initiation factor IF-3, C-terminal domain FJN13_06860 PF05198 Translation initiation factor IF-3, N-terminal domain FJN13_06865 PF01632 Ribosomal protein L35 FJN13_06870 PF00453 Ribosomal protein L20 FJN13_06875 PF00483 Nucleotidyl transferase FJN13_06875 PF01050 Mannose-6-phosphate isomerase FJN13_06880 PF02397 Bacterial sugar transferase FJN13_06890 PF02563 Polysaccharide biosynthesis/export protein FJN13_06890 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FJN13_06890 PF10531 SLBB domain FJN13_06895 PF13614 AAA domain FJN13_06925 PF03707 Bacterial signalling protein N terminal repeat FJN13_06925 PF00990 Diguanylate cyclase, GGDEF domain FJN13_06925 PF00563 EAL domain FJN13_06935 PF13439 Glycosyltransferase Family 4 FJN13_06935 PF00534 Glycosyl transferases group 1 FJN13_06945 PF00534 Glycosyl transferases group 1 FJN13_06945 PF13477 Glycosyl transferase 4-like FJN13_06950 PF00535 Glycosyl transferase family 2 FJN13_06960 PF01943 Polysaccharide biosynthesis protein FJN13_06965 PF00535 Glycosyl transferase family 2 FJN13_06995 PF13579 Glycosyl transferase 4-like domain FJN13_06995 PF00534 Glycosyl transferases group 1 FJN13_07000 PF00535 Glycosyl transferase family 2 FJN13_07015 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FJN13_07015 PF01409 tRNA synthetases class II core domain (F) FJN13_07020 PF03484 tRNA synthetase B5 domain FJN13_07020 PF03483 B3/4 domain FJN13_07020 PF01588 Putative tRNA binding domain FJN13_07020 PF03147 Ferredoxin-fold anticodon binding domain FJN13_07020 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FJN13_07025 PF00216 Bacterial DNA-binding protein FJN13_07035 PF01757 Acyltransferase family FJN13_07045 PF04073 Aminoacyl-tRNA editing domain FJN13_07050 PF01804 Penicillin amidase FJN13_07055 PF00933 Glycosyl hydrolase family 3 N terminal domain FJN13_07060 PF01923 Cobalamin adenosyltransferase FJN13_07070 PF00270 DEAD/DEAH box helicase FJN13_07070 PF00271 Helicase conserved C-terminal domain FJN13_07070 PF17757 UvrB interaction domain FJN13_07070 PF03461 TRCF domain FJN13_07070 PF02559 CarD-like/TRCF domain FJN13_07080 PF12704 MacB-like periplasmic core domain FJN13_07080 PF02687 FtsX-like permease family FJN13_07090 PF00072 Response regulator receiver domain FJN13_07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_07090 PF00512 His Kinase A (phospho-acceptor) domain FJN13_07090 PF08448 PAS fold FJN13_07090 PF13188 PAS domain FJN13_07105 PF03372 Endonuclease/Exonuclease/phosphatase family FJN13_07140 PF07690 Major Facilitator Superfamily FJN13_07150 PF00483 Nucleotidyl transferase FJN13_07170 PF00682 HMGL-like FJN13_07175 PF02785 Biotin carboxylase C-terminal domain FJN13_07175 PF00364 Biotin-requiring enzyme FJN13_07175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FJN13_07175 PF00289 Biotin carboxylase, N-terminal domain FJN13_07180 PF00378 Enoyl-CoA hydratase/isomerase FJN13_07185 PF01039 Carboxyl transferase domain FJN13_07190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FJN13_07190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FJN13_07190 PF02770 Acyl-CoA dehydrogenase, middle domain FJN13_07195 PF13411 MerR HTH family regulatory protein FJN13_07200 PF00108 Thiolase, N-terminal domain FJN13_07200 PF02803 Thiolase, C-terminal domain FJN13_07210 PF00266 Aminotransferase class-V FJN13_07215 PF17151 Periplasmic sensor domain FJN13_07215 PF00990 Diguanylate cyclase, GGDEF domain FJN13_07225 PF08411 Exonuclease C-terminal FJN13_07225 PF00929 Exonuclease FJN13_07230 PF01627 Hpt domain FJN13_07230 PF00512 His Kinase A (phospho-acceptor) domain FJN13_07230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_07230 PF00672 HAMP domain FJN13_07230 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJN13_07230 PF00072 Response regulator receiver domain FJN13_07235 PF01112 Asparaginase FJN13_07245 PF02333 Phytase FJN13_07275 PF00271 Helicase conserved C-terminal domain FJN13_07275 PF04408 Helicase associated domain (HA2) FJN13_07275 PF11898 Domain of unknown function (DUF3418) FJN13_07275 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FJN13_07275 PF00270 DEAD/DEAH box helicase FJN13_07290 PF17785 PUA-like domain FJN13_07290 PF10672 S-adenosylmethionine-dependent methyltransferase FJN13_07295 PF08659 KR domain FJN13_07295 PF02801 Beta-ketoacyl synthase, C-terminal domain FJN13_07295 PF00698 Acyl transferase domain FJN13_07295 PF00109 Beta-ketoacyl synthase, N-terminal domain FJN13_07295 PF16197 Ketoacyl-synthetase C-terminal extension FJN13_07295 PF08240 Alcohol dehydrogenase GroES-like domain FJN13_07295 PF00550 Phosphopantetheine attachment site FJN13_07295 PF14765 Polyketide synthase dehydratase FJN13_07300 PF00075 RNase H FJN13_07305 PF00929 Exonuclease FJN13_07335 PF00563 EAL domain FJN13_07335 PF12792 CSS motif domain associated with EAL FJN13_07340 PF00005 ABC transporter FJN13_07345 PF12704 MacB-like periplasmic core domain FJN13_07345 PF02687 FtsX-like permease family FJN13_07350 PF00375 Sodium:dicarboxylate symporter family FJN13_07360 PF04996 Succinylarginine dihydrolase FJN13_07370 PF01751 Toprim domain FJN13_07370 PF01396 Topoisomerase DNA binding C4 zinc finger FJN13_07370 PF01131 DNA topoisomerase FJN13_07370 PF08272 Topoisomerase I zinc-ribbon-like FJN13_07385 PF12804 MobA-like NTP transferase domain FJN13_07390 PF02634 FdhD/NarQ family FJN13_07395 PF00384 Molybdopterin oxidoreductase FJN13_07405 PF02798 Glutathione S-transferase, N-terminal domain FJN13_07415 PF03466 LysR substrate binding domain FJN13_07415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_07420 PF13673 Acetyltransferase (GNAT) domain FJN13_07425 PF13419 Haloacid dehalogenase-like hydrolase FJN13_07435 PF10150 Ribonuclease E/G family FJN13_07435 PF00575 S1 RNA binding domain FJN13_07435 PF12111 Polyribonucleotide phosphorylase C terminal FJN13_07440 PF01479 S4 domain FJN13_07440 PF00849 RNA pseudouridylate synthase FJN13_07445 PF13419 Haloacid dehalogenase-like hydrolase FJN13_07450 PF02545 Maf-like protein FJN13_07455 PF02620 Large ribosomal RNA subunit accumulation protein YceD FJN13_07460 PF01783 Ribosomal L32p protein family FJN13_07465 PF02504 Fatty acid synthesis protein FJN13_07470 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FJN13_07470 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FJN13_07475 PF00698 Acyl transferase domain FJN13_07485 PF00550 Phosphopantetheine attachment site FJN13_07490 PF02801 Beta-ketoacyl synthase, C-terminal domain FJN13_07490 PF00109 Beta-ketoacyl synthase, N-terminal domain FJN13_07495 PF01063 Amino-transferase class IV FJN13_07500 PF02618 YceG-like family FJN13_07505 PF02223 Thymidylate kinase FJN13_07510 PF09115 DNA polymerase III, delta subunit, C terminal FJN13_07515 PF01026 TatD related DNase FJN13_07525 PF13460 NAD(P)H-binding FJN13_07530 PF00072 Response regulator receiver domain FJN13_07530 PF00990 Diguanylate cyclase, GGDEF domain FJN13_07555 PF00561 alpha/beta hydrolase fold FJN13_07560 PF00378 Enoyl-CoA hydratase/isomerase FJN13_07560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FJN13_07560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FJN13_07565 PF02803 Thiolase, C-terminal domain FJN13_07565 PF00108 Thiolase, N-terminal domain FJN13_07570 PF12806 Acetyl-CoA dehydrogenase C-terminal like FJN13_07570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FJN13_07570 PF02770 Acyl-CoA dehydrogenase, middle domain FJN13_07570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FJN13_07585 PF04198 Putative sugar-binding domain FJN13_07590 PF13419 Haloacid dehalogenase-like hydrolase FJN13_07600 PF01232 Mannitol dehydrogenase Rossmann domain FJN13_07600 PF08125 Mannitol dehydrogenase C-terminal domain FJN13_07610 PF03466 LysR substrate binding domain FJN13_07610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_07615 PF01575 MaoC like domain FJN13_07625 PF00924 Mechanosensitive ion channel FJN13_07630 PF07715 TonB-dependent Receptor Plug Domain FJN13_07630 PF00593 TonB dependent receptor FJN13_07635 PF01329 Pterin 4 alpha carbinolamine dehydratase FJN13_07655 PF00672 HAMP domain FJN13_07655 PF00072 Response regulator receiver domain FJN13_07655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_07655 PF01627 Hpt domain FJN13_07655 PF00512 His Kinase A (phospho-acceptor) domain FJN13_07655 PF17149 Periplasmic sensor domain found in signal transduction proteins FJN13_07660 PF00072 Response regulator receiver domain FJN13_07665 PF02576 RimP N-terminal domain FJN13_07665 PF17384 RimP C-terminal SH3 domain FJN13_07670 PF08529 NusA N-terminal domain FJN13_07670 PF13184 NusA-like KH domain FJN13_07670 PF00575 S1 RNA binding domain FJN13_07675 PF11987 Translation-initiation factor 2 FJN13_07675 PF00009 Elongation factor Tu GTP binding domain FJN13_07675 PF08364 Bacterial translation initiation factor IF-2 associated region FJN13_07675 PF04760 Translation initiation factor IF-2, N-terminal region FJN13_07680 PF02033 Ribosome-binding factor A FJN13_07685 PF09157 Pseudouridine synthase II TruB, C-terminal FJN13_07685 PF16198 tRNA pseudouridylate synthase B C-terminal domain FJN13_07685 PF01509 TruB family pseudouridylate synthase (N terminal domain) FJN13_07695 PF00312 Ribosomal protein S15 FJN13_07700 PF03707 Bacterial signalling protein N terminal repeat FJN13_07700 PF00990 Diguanylate cyclase, GGDEF domain FJN13_07700 PF00563 EAL domain FJN13_07705 PF01479 S4 domain FJN13_07705 PF00849 RNA pseudouridylate synthase FJN13_07715 PF00795 Carbon-nitrogen hydrolase FJN13_07715 PF00583 Acetyltransferase (GNAT) family FJN13_07745 PF00578 AhpC/TSA family FJN13_07745 PF10417 C-terminal domain of 1-Cys peroxiredoxin FJN13_07750 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_07750 PF13192 Thioredoxin domain FJN13_07790 PF08497 Radical SAM N-terminal FJN13_07790 PF04055 Radical SAM superfamily FJN13_07790 PF11842 Domain of unknown function (DUF3362) FJN13_07805 PF07715 TonB-dependent Receptor Plug Domain FJN13_07805 PF00593 TonB dependent receptor FJN13_07810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FJN13_07810 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_07820 PF13416 Bacterial extracellular solute-binding protein FJN13_07830 PF00005 ABC transporter FJN13_07835 PF01066 CDP-alcohol phosphatidyltransferase FJN13_07855 PF00990 Diguanylate cyclase, GGDEF domain FJN13_07855 PF01590 GAF domain FJN13_07855 PF00563 EAL domain FJN13_07855 PF00360 Phytochrome region FJN13_07875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_07875 PF03466 LysR substrate binding domain FJN13_07895 PF00005 ABC transporter FJN13_07905 PF00106 short chain dehydrogenase FJN13_07910 PF01370 NAD dependent epimerase/dehydratase family FJN13_07915 PF01758 Sodium Bile acid symporter family FJN13_07940 PF00589 Phage integrase family FJN13_07940 PF14659 Phage integrase, N-terminal SAM-like domain FJN13_07960 PF05840 Bacteriophage replication gene A protein (GPA) FJN13_07970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FJN13_07975 PF01668 SmpB protein FJN13_07980 PF03364 Polyketide cyclase / dehydrase and lipid transport FJN13_07985 PF03658 RnfH family Ubiquitin FJN13_07995 PF02028 BCCT, betaine/carnitine/choline family transporter FJN13_08000 PF00593 TonB dependent receptor FJN13_08000 PF07715 TonB-dependent Receptor Plug Domain FJN13_08005 PF13181 Tetratricopeptide repeat FJN13_08015 PF03618 Kinase/pyrophosphorylase FJN13_08020 PF02896 PEP-utilising enzyme, TIM barrel domain FJN13_08020 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FJN13_08020 PF00391 PEP-utilising enzyme, mobile domain FJN13_08030 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FJN13_08035 PF00111 2Fe-2S iron-sulfur cluster binding domain FJN13_08035 PF01799 [2Fe-2S] binding domain FJN13_08055 PF08007 Cupin superfamily protein FJN13_08060 PF00211 Adenylate and Guanylate cyclase catalytic domain FJN13_08065 PF00206 Lyase FJN13_08065 PF08328 Adenylosuccinate lyase C-terminal FJN13_08070 PF04356 Protein of unknown function (DUF489) FJN13_08080 PF00849 RNA pseudouridylate synthase FJN13_08085 PF03971 Monomeric isocitrate dehydrogenase FJN13_08090 PF00313 'Cold-shock' DNA-binding domain FJN13_08095 PF02617 ATP-dependent Clp protease adaptor protein ClpS FJN13_08100 PF02861 Clp amino terminal domain, pathogenicity island component FJN13_08100 PF10431 C-terminal, D2-small domain, of ClpB protein FJN13_08100 PF07724 AAA domain (Cdc48 subfamily) FJN13_08100 PF00004 ATPase family associated with various cellular activities (AAA) FJN13_08100 PF17871 AAA lid domain FJN13_08105 PF01176 Translation initiation factor 1A / IF-1 FJN13_08110 PF04376 Arginine-tRNA-protein transferase, N terminus FJN13_08110 PF04377 Arginine-tRNA-protein transferase, C terminus FJN13_08115 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FJN13_08120 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_08125 PF04217 Protein of unknown function, DUF412 FJN13_08130 PF10263 SprT-like family FJN13_08135 PF01343 Peptidase family S49 FJN13_08150 PF00881 Nitroreductase family FJN13_08160 PF17763 Glutaminase/Asparaginase C-terminal domain FJN13_08160 PF00710 Asparaginase, N-terminal FJN13_08165 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FJN13_08165 PF04055 Radical SAM superfamily FJN13_08170 PF03099 Biotin/lipoate A/B protein ligase family FJN13_08175 PF04359 Protein of unknown function (DUF493) FJN13_08180 PF07943 Penicillin-binding protein 5, C-terminal domain FJN13_08180 PF00768 D-alanyl-D-alanine carboxypeptidase FJN13_08185 PF05036 Sporulation related domain FJN13_08185 PF03330 Lytic transglycolase FJN13_08190 PF01098 Cell cycle protein FJN13_08195 PF03717 Penicillin-binding Protein dimerisation domain FJN13_08195 PF00905 Penicillin binding protein transpeptidase domain FJN13_08200 PF02590 Predicted SPOUT methyltransferase FJN13_08210 PF01467 Cytidylyltransferase-like FJN13_08215 PF06144 DNA polymerase III, delta subunit FJN13_08215 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FJN13_08220 PF04390 Lipopolysaccharide-assembly FJN13_08225 PF13603 Leucyl-tRNA synthetase, Domain 2 FJN13_08225 PF08264 Anticodon-binding domain of tRNA FJN13_08225 PF00133 tRNA synthetases class I (I, L, M and V) FJN13_08235 PF05362 Lon protease (S16) C-terminal proteolytic domain FJN13_08235 PF13654 AAA domain FJN13_08240 PF12697 Alpha/beta hydrolase family FJN13_08245 PF00990 Diguanylate cyclase, GGDEF domain FJN13_08250 PF00106 short chain dehydrogenase FJN13_08255 PF01985 CRS1 / YhbY (CRM) domain FJN13_08260 PF01728 FtsJ-like methyltransferase FJN13_08265 PF01434 Peptidase family M41 FJN13_08265 PF00004 ATPase family associated with various cellular activities (AAA) FJN13_08265 PF17862 AAA+ lid domain FJN13_08265 PF06480 FtsH Extracellular FJN13_08270 PF00809 Pterin binding enzyme FJN13_08275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FJN13_08275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FJN13_08275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FJN13_08275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FJN13_08280 PF00121 Triosephosphate isomerase FJN13_08285 PF03840 Preprotein translocase SecG subunit FJN13_08295 PF00563 EAL domain FJN13_08295 PF00990 Diguanylate cyclase, GGDEF domain FJN13_08295 PF03707 Bacterial signalling protein N terminal repeat FJN13_08295 PF13188 PAS domain FJN13_08300 PF01679 Proteolipid membrane potential modulator FJN13_08310 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FJN13_08310 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FJN13_08315 PF02142 MGS-like domain FJN13_08315 PF00781 Diacylglycerol kinase catalytic domain FJN13_08345 PF00474 Sodium:solute symporter family FJN13_08370 PF00013 KH domain FJN13_08370 PF01138 3' exoribonuclease family, domain 1 FJN13_08370 PF03725 3' exoribonuclease family, domain 2 FJN13_08370 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FJN13_08370 PF00575 S1 RNA binding domain FJN13_08460 PF04134 Protein of unknown function, DUF393 FJN13_08500 PF03544 Gram-negative bacterial TonB protein C-terminal FJN13_08520 PF13181 Tetratricopeptide repeat FJN13_08520 PF07719 Tetratricopeptide repeat FJN13_08535 PF06470 SMC proteins Flexible Hinge Domain FJN13_08535 PF02463 RecF/RecN/SMC N terminal domain FJN13_08540 PF04354 ZipA, C-terminal FtsZ-binding domain FJN13_08545 PF01653 NAD-dependent DNA ligase adenylation domain FJN13_08545 PF00533 BRCA1 C Terminus (BRCT) domain FJN13_08545 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FJN13_08545 PF12826 Helix-hairpin-helix motif FJN13_08545 PF03120 NAD-dependent DNA ligase OB-fold domain FJN13_08560 PF00664 ABC transporter transmembrane region FJN13_08560 PF00005 ABC transporter FJN13_08565 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FJN13_08570 PF03966 Trm112p-like protein FJN13_08575 PF02348 Cytidylyltransferase FJN13_08585 PF00919 Uncharacterized protein family UPF0004 FJN13_08585 PF04055 Radical SAM superfamily FJN13_08585 PF18693 TRAM domain FJN13_08600 PF00899 ThiF family FJN13_08605 PF13409 Glutathione S-transferase, N-terminal domain FJN13_08610 PF05726 Pirin C-terminal cupin domain FJN13_08610 PF02678 Pirin FJN13_08615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FJN13_08615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FJN13_08615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FJN13_08615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FJN13_08625 PF00285 Citrate synthase, C-terminal domain FJN13_08630 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FJN13_08635 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FJN13_08640 PF02910 Fumarate reductase flavoprotein C-term FJN13_08640 PF00890 FAD binding domain FJN13_08645 PF13085 2Fe-2S iron-sulfur cluster binding domain FJN13_08650 PF16078 2-oxoglutarate dehydrogenase N-terminus FJN13_08650 PF02779 Transketolase, pyrimidine binding domain FJN13_08650 PF00676 Dehydrogenase E1 component FJN13_08650 PF16870 2-oxoglutarate dehydrogenase C-terminal FJN13_08655 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FJN13_08655 PF02817 e3 binding domain FJN13_08655 PF00364 Biotin-requiring enzyme FJN13_08660 PF08442 ATP-grasp domain FJN13_08660 PF00549 CoA-ligase FJN13_08665 PF02629 CoA binding domain FJN13_08665 PF00549 CoA-ligase FJN13_08690 PF04820 Tryptophan halogenase FJN13_08695 PF04820 Tryptophan halogenase FJN13_08705 PF17967 Pullulanase N2 domain FJN13_08705 PF11852 Domain of unknown function (DUF3372) FJN13_08705 PF03714 Bacterial pullanase-associated domain FJN13_08705 PF18494 Pullulanase Ins domain FJN13_08705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FJN13_08710 PF01734 Patatin-like phospholipase FJN13_08725 PF16657 Maltogenic Amylase, C-terminal domain FJN13_08725 PF00128 Alpha amylase, catalytic domain FJN13_08725 PF02903 Alpha amylase, N-terminal ig-like domain FJN13_08730 PF09087 Cyclomaltodextrinase, N-terminal FJN13_08730 PF10438 Cyclo-malto-dextrinase C-terminal domain FJN13_08730 PF00128 Alpha amylase, catalytic domain FJN13_08740 PF02806 Alpha amylase, C-terminal all-beta domain FJN13_08740 PF00686 Starch binding domain FJN13_08740 PF00128 Alpha amylase, catalytic domain FJN13_08740 PF01833 IPT/TIG domain FJN13_08745 PF00356 Bacterial regulatory proteins, lacI family FJN13_08750 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FJN13_08750 PF00749 tRNA synthetases class I (E and Q), catalytic domain FJN13_08755 PF00106 short chain dehydrogenase FJN13_08760 PF12262 Bacterial virulence factor lipase N-terminal FJN13_08765 PF01804 Penicillin amidase FJN13_08770 PF08496 Peptidase family S49 N-terminal FJN13_08770 PF01343 Peptidase family S49 FJN13_08785 PF01784 NIF3 (NGG1p interacting factor 3) FJN13_08795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FJN13_08795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FJN13_08800 PF00255 Glutathione peroxidase FJN13_08805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FJN13_08805 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FJN13_08815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FJN13_08815 PF02770 Acyl-CoA dehydrogenase, middle domain FJN13_08815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FJN13_08820 PF00378 Enoyl-CoA hydratase/isomerase FJN13_08825 PF13847 Methyltransferase domain FJN13_08835 PF00884 Sulfatase FJN13_08835 PF11893 Domain of unknown function (DUF3413) FJN13_08840 PF07208 Protein of unknown function (DUF1414) FJN13_08845 PF04245 37-kD nucleoid-associated bacterial protein FJN13_08875 PF07694 5TMR of 5TMR-LYT FJN13_08875 PF06580 Histidine kinase FJN13_08880 PF00072 Response regulator receiver domain FJN13_08880 PF04397 LytTr DNA-binding domain FJN13_08885 PF00365 Phosphofructokinase FJN13_08895 PF13411 MerR HTH family regulatory protein FJN13_08910 PF01545 Cation efflux family FJN13_08910 PF16916 Dimerisation domain of Zinc Transporter FJN13_08930 PF00873 AcrB/AcrD/AcrF family FJN13_08945 PF00512 His Kinase A (phospho-acceptor) domain FJN13_08945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_08945 PF01627 Hpt domain FJN13_08945 PF00989 PAS fold FJN13_08945 PF00072 Response regulator receiver domain FJN13_08945 PF00497 Bacterial extracellular solute-binding proteins, family 3 FJN13_08965 PF00271 Helicase conserved C-terminal domain FJN13_08965 PF00270 DEAD/DEAH box helicase FJN13_08970 PF01144 Coenzyme A transferase FJN13_08975 PF01144 Coenzyme A transferase FJN13_08980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_08980 PF03466 LysR substrate binding domain FJN13_08995 PF03466 LysR substrate binding domain FJN13_08995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_09000 PF03313 Serine dehydratase alpha chain FJN13_09000 PF03315 Serine dehydratase beta chain FJN13_09005 PF00293 NUDIX domain FJN13_09010 PF04715 Anthranilate synthase component I, N terminal region FJN13_09010 PF00425 chorismate binding enzyme FJN13_09025 PF02646 RmuC family FJN13_09030 PF02225 PA domain FJN13_09030 PF00082 Subtilase family FJN13_09030 PF13860 FlgD Ig-like domain FJN13_09030 PF05922 Peptidase inhibitor I9 FJN13_09035 PF00676 Dehydrogenase E1 component FJN13_09040 PF02780 Transketolase, C-terminal domain FJN13_09040 PF02779 Transketolase, pyrimidine binding domain FJN13_09045 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FJN13_09045 PF00364 Biotin-requiring enzyme FJN13_09045 PF02817 e3 binding domain FJN13_09050 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FJN13_09055 PF00069 Protein kinase domain FJN13_09065 PF00132 Bacterial transferase hexapeptide (six repeats) FJN13_09070 PF00266 Aminotransferase class-V FJN13_09080 PF13185 GAF domain FJN13_09090 PF17516 ProQ C-terminal domain FJN13_09090 PF04352 ProQ/FINO family FJN13_09095 PF17804 Tail specific protease N-terminal domain FJN13_09095 PF03572 Peptidase family S41 FJN13_09095 PF00595 PDZ domain FJN13_09095 PF11818 C-terminal domain of tail specific protease (DUF3340) FJN13_09100 PF00209 Sodium:neurotransmitter symporter family FJN13_09110 PF01433 Peptidase family M1 domain FJN13_09110 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FJN13_09110 PF11940 Domain of unknown function (DUF3458) Ig-like fold FJN13_09125 PF07044 Protein of unknown function (DUF1329) FJN13_09140 PF05088 Bacterial NAD-glutamate dehydrogenase FJN13_09145 PF01180 Dihydroorotate dehydrogenase FJN13_09150 PF02926 THUMP domain FJN13_09150 PF10672 S-adenosylmethionine-dependent methyltransferase FJN13_09150 PF01170 Putative RNA methylase family UPF0020 FJN13_09170 PF04957 Ribosome modulation factor FJN13_09175 PF07977 FabA-like domain FJN13_09185 PF00875 DNA photolyase FJN13_09185 PF03441 FAD binding domain of DNA photolyase FJN13_09190 PF03441 FAD binding domain of DNA photolyase FJN13_09190 PF00875 DNA photolyase FJN13_09195 PF03441 FAD binding domain of DNA photolyase FJN13_09195 PF00875 DNA photolyase FJN13_09200 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FJN13_09215 PF04183 IucA / IucC family FJN13_09215 PF06276 Ferric iron reductase FhuF-like transporter FJN13_09220 PF06276 Ferric iron reductase FhuF-like transporter FJN13_09220 PF04183 IucA / IucC family FJN13_09225 PF13193 AMP-binding enzyme C-terminal domain FJN13_09225 PF00501 AMP-binding enzyme FJN13_09230 PF00550 Phosphopantetheine attachment site FJN13_09235 PF01261 Xylose isomerase-like TIM barrel FJN13_09265 PF02899 Phage integrase, N-terminal SAM-like domain FJN13_09265 PF00589 Phage integrase family FJN13_09275 PF01219 Prokaryotic diacylglycerol kinase FJN13_09280 PF00582 Universal stress protein family FJN13_09290 PF01645 Conserved region in glutamate synthase FJN13_09295 PF00999 Sodium/hydrogen exchanger family FJN13_09300 PF00210 Ferritin-like domain FJN13_09305 PF00210 Ferritin-like domain FJN13_09315 PF00115 Cytochrome C and Quinol oxidase polypeptide I FJN13_09330 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FJN13_09330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FJN13_09340 PF00403 Heavy-metal-associated domain FJN13_09355 PF13545 Crp-like helix-turn-helix domain FJN13_09355 PF00027 Cyclic nucleotide-binding domain FJN13_09360 PF00582 Universal stress protein family FJN13_09365 PF01171 PP-loop family FJN13_09370 PF01734 Patatin-like phospholipase FJN13_09390 PF01810 LysE type translocator FJN13_09395 PF02146 Sir2 family FJN13_09400 PF00581 Rhodanese-like domain FJN13_09405 PF08534 Redoxin FJN13_09415 PF00563 EAL domain FJN13_09415 PF12792 CSS motif domain associated with EAL FJN13_09440 PF01066 CDP-alcohol phosphatidyltransferase FJN13_09445 PF01541 GIY-YIG catalytic domain FJN13_09445 PF08459 UvrC Helix-hairpin-helix N-terminal FJN13_09445 PF02151 UvrB/uvrC motif FJN13_09450 PF00072 Response regulator receiver domain FJN13_09450 PF00196 Bacterial regulatory proteins, luxR family FJN13_09455 PF00155 Aminotransferase class I and II FJN13_09460 PF03781 Sulfatase-modifying factor enzyme 1 FJN13_09460 PF12867 DinB superfamily FJN13_09485 PF07681 DoxX FJN13_09490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_09490 PF03466 LysR substrate binding domain FJN13_09505 PF01027 Inhibitor of apoptosis-promoting Bax1 FJN13_09510 PF02635 DsrE/DsrF-like family FJN13_09525 PF04358 DsrC like protein FJN13_09545 PF00593 TonB dependent receptor FJN13_09545 PF07715 TonB-dependent Receptor Plug Domain FJN13_09545 PF07715 TonB-dependent Receptor Plug Domain FJN13_09545 PF00593 TonB dependent receptor FJN13_09550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FJN13_09550 PF02403 Seryl-tRNA synthetase N-terminal domain FJN13_09555 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FJN13_09560 PF16193 AAA C-terminal domain FJN13_09560 PF00004 ATPase family associated with various cellular activities (AAA) FJN13_09560 PF12002 MgsA AAA+ ATPase C terminal FJN13_09570 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FJN13_09570 PF17854 FtsK alpha domain FJN13_09570 PF09397 Ftsk gamma domain FJN13_09570 PF01580 FtsK/SpoIIIE family FJN13_09575 PF01037 Lrp/AsnC ligand binding domain FJN13_09580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FJN13_09580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FJN13_09585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FJN13_09590 PF18073 Rubredoxin metal binding domain FJN13_09605 PF00216 Bacterial DNA-binding protein FJN13_09610 PF00575 S1 RNA binding domain FJN13_09615 PF02224 Cytidylate kinase FJN13_09620 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FJN13_09625 PF00266 Aminotransferase class-V FJN13_09630 PF03989 DNA gyrase C-terminal domain, beta-propeller FJN13_09630 PF00521 DNA gyrase/topoisomerase IV, subunit A FJN13_09640 PF03477 ATP cone domain FJN13_09640 PF02867 Ribonucleotide reductase, barrel domain FJN13_09640 PF00317 Ribonucleotide reductase, all-alpha domain FJN13_09645 PF00268 Ribonucleotide reductase, small chain FJN13_09650 PF00111 2Fe-2S iron-sulfur cluster binding domain FJN13_09660 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_09660 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FJN13_09665 PF00563 EAL domain FJN13_09665 PF03707 Bacterial signalling protein N terminal repeat FJN13_09665 PF00990 Diguanylate cyclase, GGDEF domain FJN13_09670 PF00892 EamA-like transporter family FJN13_09675 PF01259 SAICAR synthetase FJN13_09680 PF06804 NlpB/DapX lipoprotein FJN13_09685 PF00701 Dihydrodipicolinate synthetase family FJN13_09695 PF00578 AhpC/TSA family FJN13_09700 PF01594 AI-2E family transporter FJN13_09705 PF01435 Peptidase family M48 FJN13_09715 PF03960 ArsC family FJN13_09720 PF03358 NADPH-dependent FMN reductase FJN13_09730 PF00308 Bacterial dnaA protein FJN13_09740 PF00586 AIR synthase related protein, N-terminal domain FJN13_09740 PF02769 AIR synthase related protein, C-terminal domain FJN13_09745 PF00551 Formyl transferase FJN13_09755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FJN13_09755 PF02770 Acyl-CoA dehydrogenase, middle domain FJN13_09755 PF09317 Domain of unknown function (DUF1974) FJN13_09755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FJN13_09765 PF00196 Bacterial regulatory proteins, luxR family FJN13_09765 PF00072 Response regulator receiver domain FJN13_09770 PF13649 Methyltransferase domain FJN13_09775 PF08003 Protein of unknown function (DUF1698) FJN13_09780 PF00485 Phosphoribulokinase / Uridine kinase family FJN13_09795 PF00128 Alpha amylase, catalytic domain FJN13_09800 PF13419 Haloacid dehalogenase-like hydrolase FJN13_09805 PF03454 MoeA C-terminal region (domain IV) FJN13_09805 PF00994 Probable molybdopterin binding domain FJN13_09805 PF03453 MoeA N-terminal region (domain I and II) FJN13_09810 PF01554 MatE FJN13_09825 PF00004 ATPase family associated with various cellular activities (AAA) FJN13_09825 PF17862 AAA+ lid domain FJN13_09825 PF01434 Peptidase family M41 FJN13_09830 PF00291 Pyridoxal-phosphate dependent enzyme FJN13_10110 PF02567 Phenazine biosynthesis-like protein FJN13_10120 PF00378 Enoyl-CoA hydratase/isomerase FJN13_10135 PF00255 Glutathione peroxidase FJN13_10140 PF02525 Flavodoxin-like fold FJN13_10150 PF01053 Cys/Met metabolism PLP-dependent enzyme FJN13_10165 PF00155 Aminotransferase class I and II FJN13_10170 PF10459 Peptidase S46 FJN13_10180 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FJN13_10195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FJN13_10195 PF02770 Acyl-CoA dehydrogenase, middle domain FJN13_10195 PF12806 Acetyl-CoA dehydrogenase C-terminal like FJN13_10195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FJN13_10200 PF12833 Helix-turn-helix domain FJN13_10200 PF07883 Cupin domain FJN13_10205 PF00593 TonB dependent receptor FJN13_10205 PF07715 TonB-dependent Receptor Plug Domain FJN13_10215 PF00326 Prolyl oligopeptidase family FJN13_10215 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FJN13_10220 PF00873 AcrB/AcrD/AcrF family FJN13_10225 PF13533 Biotin-lipoyl like FJN13_10235 PF00766 Electron transfer flavoprotein FAD-binding domain FJN13_10235 PF01012 Electron transfer flavoprotein domain FJN13_10240 PF01012 Electron transfer flavoprotein domain FJN13_10250 PF00816 H-NS histone family FJN13_10255 PF00561 alpha/beta hydrolase fold FJN13_10265 PF00258 Flavodoxin FJN13_10270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_10270 PF00672 HAMP domain FJN13_10275 PF01475 Ferric uptake regulator family FJN13_10280 PF01063 Amino-transferase class IV FJN13_10285 PF02626 Carboxyltransferase domain, subdomain A and B FJN13_10290 PF02682 Carboxyltransferase domain, subdomain C and D FJN13_10295 PF03746 LamB/YcsF family FJN13_10300 PF17783 CvfB-like winged helix domain FJN13_10300 PF13509 S1 domain FJN13_10305 PF02566 OsmC-like protein FJN13_10310 PF13533 Biotin-lipoyl like FJN13_10315 PF00873 AcrB/AcrD/AcrF family FJN13_10320 PF00873 AcrB/AcrD/AcrF family FJN13_10335 PF00155 Aminotransferase class I and II FJN13_10345 PF01966 HD domain FJN13_10345 PF13286 Phosphohydrolase-associated domain FJN13_10350 PF00174 Oxidoreductase molybdopterin binding domain FJN13_10355 PF01794 Ferric reductase like transmembrane component FJN13_10370 PF02810 SEC-C motif FJN13_10375 PF08447 PAS fold FJN13_10375 PF00990 Diguanylate cyclase, GGDEF domain FJN13_10375 PF00563 EAL domain FJN13_10375 PF08448 PAS fold FJN13_10375 PF13426 PAS domain FJN13_10375 PF05231 MASE1 FJN13_10380 PF00128 Alpha amylase, catalytic domain FJN13_10390 PF00107 Zinc-binding dehydrogenase FJN13_10390 PF08240 Alcohol dehydrogenase GroES-like domain FJN13_10400 PF02770 Acyl-CoA dehydrogenase, middle domain FJN13_10400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FJN13_10400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FJN13_10410 PF07715 TonB-dependent Receptor Plug Domain FJN13_10410 PF00593 TonB dependent receptor FJN13_10430 PF04055 Radical SAM superfamily FJN13_10430 PF06969 HemN C-terminal domain FJN13_10435 PF03459 TOBE domain FJN13_10435 PF00005 ABC transporter FJN13_10435 PF10649 Protein of unknown function (DUF2478) FJN13_10440 PF00528 Binding-protein-dependent transport system inner membrane component FJN13_10450 PF02391 MoaE protein FJN13_10455 PF02597 ThiS family FJN13_10460 PF01967 MoaC family FJN13_10465 PF00994 Probable molybdopterin binding domain FJN13_10470 PF00899 ThiF family FJN13_10480 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FJN13_10485 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FJN13_10500 PF00155 Aminotransferase class I and II FJN13_10505 PF03435 Saccharopine dehydrogenase NADP binding domain FJN13_10510 PF00155 Aminotransferase class I and II FJN13_10525 PF08267 Cobalamin-independent synthase, N-terminal domain FJN13_10525 PF01717 Cobalamin-independent synthase, Catalytic domain FJN13_10530 PF00593 TonB dependent receptor FJN13_10530 PF07715 TonB-dependent Receptor Plug Domain FJN13_10545 PF00892 EamA-like transporter family FJN13_10555 PF02245 Methylpurine-DNA glycosylase (MPG) FJN13_10570 PF13538 UvrD-like helicase C-terminal domain FJN13_10575 PF12705 PD-(D/E)XK nuclease superfamily FJN13_10575 PF13361 UvrD-like helicase C-terminal domain FJN13_10575 PF00580 UvrD/REP helicase N-terminal domain FJN13_10580 PF17946 RecC C-terminal domain FJN13_10590 PF00501 AMP-binding enzyme FJN13_10595 PF00563 EAL domain FJN13_10595 PF00360 Phytochrome region FJN13_10595 PF00990 Diguanylate cyclase, GGDEF domain FJN13_10595 PF01590 GAF domain FJN13_10600 PF12706 Beta-lactamase superfamily domain FJN13_10600 PF17770 Ribonuclease J C-terminal domain FJN13_10600 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FJN13_10615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_10615 PF03466 LysR substrate binding domain FJN13_10630 PF01022 Bacterial regulatory protein, arsR family FJN13_10640 PF03466 LysR substrate binding domain FJN13_10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_10650 PF02954 Bacterial regulatory protein, Fis family FJN13_10650 PF00158 Sigma-54 interaction domain FJN13_10650 PF00072 Response regulator receiver domain FJN13_10660 PF00512 His Kinase A (phospho-acceptor) domain FJN13_10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_10660 PF01590 GAF domain FJN13_10660 PF00360 Phytochrome region FJN13_10660 PF08446 PAS fold FJN13_10665 PF00072 Response regulator receiver domain FJN13_10670 PF00512 His Kinase A (phospho-acceptor) domain FJN13_10670 PF00072 Response regulator receiver domain FJN13_10670 PF09308 LuxQ, periplasmic FJN13_10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_10700 PF07043 Protein of unknown function (DUF1328) FJN13_10720 PF07023 Protein of unknown function (DUF1315) FJN13_10735 PF01235 Sodium:alanine symporter family FJN13_10740 PF00246 Zinc carboxypeptidase FJN13_10740 PF18027 Cytosolic carboxypeptidase N-terminal domain FJN13_10745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FJN13_10745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FJN13_10755 PF01641 SelR domain FJN13_10760 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FJN13_10760 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FJN13_10765 PF00128 Alpha amylase, catalytic domain FJN13_10765 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FJN13_10770 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FJN13_10770 PF02806 Alpha amylase, C-terminal all-beta domain FJN13_10770 PF00128 Alpha amylase, catalytic domain FJN13_10775 PF02446 4-alpha-glucanotransferase FJN13_10780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FJN13_10780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FJN13_10785 PF01263 Aldose 1-epimerase FJN13_10790 PF01081 KDPG and KHG aldolase FJN13_10795 PF02685 Glucokinase FJN13_10800 PF00920 Dehydratase family FJN13_10805 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FJN13_10810 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FJN13_10810 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FJN13_10815 PF01418 Helix-turn-helix domain, rpiR family FJN13_10815 PF01380 SIS domain FJN13_10820 PF00224 Pyruvate kinase, barrel domain FJN13_10820 PF02887 Pyruvate kinase, alpha/beta domain FJN13_10825 PF01048 Phosphorylase superfamily FJN13_10835 PF08787 Alginate lyase FJN13_10840 PF04972 BON domain FJN13_10865 PF09347 Domain of unknown function (DUF1989) FJN13_10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_10880 PF00672 HAMP domain FJN13_10880 PF00512 His Kinase A (phospho-acceptor) domain FJN13_10880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJN13_10880 PF00072 Response regulator receiver domain FJN13_10880 PF01627 Hpt domain FJN13_10895 PF04231 Endonuclease I FJN13_10915 PF03466 LysR substrate binding domain FJN13_10915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_10920 PF00465 Iron-containing alcohol dehydrogenase FJN13_10925 PF08448 PAS fold FJN13_10925 PF08447 PAS fold FJN13_10925 PF00990 Diguanylate cyclase, GGDEF domain FJN13_10925 PF00563 EAL domain FJN13_10935 PF11849 Domain of unknown function (DUF3369) FJN13_10940 PF00497 Bacterial extracellular solute-binding proteins, family 3 FJN13_10940 PF00512 His Kinase A (phospho-acceptor) domain FJN13_10940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_10990 PF01420 Type I restriction modification DNA specificity domain FJN13_10995 PF02384 N-6 DNA Methylase FJN13_11000 PF02661 Fic/DOC family FJN13_11000 PF13784 Fic/DOC family N-terminal FJN13_11005 PF00271 Helicase conserved C-terminal domain FJN13_11005 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FJN13_11005 PF08463 EcoEI R protein C-terminal FJN13_11005 PF04851 Type III restriction enzyme, res subunit FJN13_11030 PF00589 Phage integrase family FJN13_11030 PF12167 Arm DNA-binding domain FJN13_11050 PF00075 RNase H FJN13_11070 PF00239 Resolvase, N terminal domain FJN13_11070 PF02796 Helix-turn-helix domain of resolvase FJN13_11090 PF00939 Sodium:sulfate symporter transmembrane region FJN13_11095 PF00692 dUTPase FJN13_11100 PF10609 NUBPL iron-transfer P-loop NTPase FJN13_11105 PF01588 Putative tRNA binding domain FJN13_11105 PF09334 tRNA synthetases class I (M) FJN13_11105 PF08264 Anticodon-binding domain of tRNA FJN13_11110 PF00924 Mechanosensitive ion channel FJN13_11110 PF05552 Conserved TM helix FJN13_11115 PF08241 Methyltransferase domain FJN13_11120 PF00753 Metallo-beta-lactamase superfamily FJN13_11120 PF16123 Hydroxyacylglutathione hydrolase C-terminus FJN13_11125 PF01476 LysM domain FJN13_11125 PF01464 Transglycosylase SLT domain FJN13_11155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FJN13_11160 PF00149 Calcineurin-like phosphoesterase FJN13_11170 PF15975 Flotillin FJN13_11170 PF01145 SPFH domain / Band 7 family FJN13_11180 PF00128 Alpha amylase, catalytic domain FJN13_11185 PF01638 HxlR-like helix-turn-helix FJN13_11190 PF00107 Zinc-binding dehydrogenase FJN13_11190 PF08240 Alcohol dehydrogenase GroES-like domain FJN13_11205 PF00199 Catalase FJN13_11205 PF06628 Catalase-related immune-responsive FJN13_11205 PF18011 C-terminal domain found in long catalases FJN13_11210 PF00107 Zinc-binding dehydrogenase FJN13_11210 PF08240 Alcohol dehydrogenase GroES-like domain FJN13_11215 PF03466 LysR substrate binding domain FJN13_11215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_11230 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FJN13_11240 PF00156 Phosphoribosyl transferase domain FJN13_11245 PF02674 Colicin V production protein FJN13_11250 PF05036 Sporulation related domain FJN13_11255 PF08245 Mur ligase middle domain FJN13_11255 PF02875 Mur ligase family, glutamate ligase domain FJN13_11260 PF17848 Acetyl-coA carboxylase zinc finger domain FJN13_11260 PF01039 Carboxyl transferase domain FJN13_11265 PF01416 tRNA pseudouridine synthase FJN13_11275 PF02774 Semialdehyde dehydrogenase, dimerisation domain FJN13_11275 PF01118 Semialdehyde dehydrogenase, NAD binding domain FJN13_11280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FJN13_11280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FJN13_11280 PF11890 Domain of unknown function (DUF3410) FJN13_11285 PF00596 Class II Aldolase and Adducin N-terminal domain FJN13_11300 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FJN13_11305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_11305 PF03466 LysR substrate binding domain FJN13_11310 PF00892 EamA-like transporter family FJN13_11325 PF01799 [2Fe-2S] binding domain FJN13_11325 PF00111 2Fe-2S iron-sulfur cluster binding domain FJN13_11335 PF00144 Beta-lactamase FJN13_11340 PF00109 Beta-ketoacyl synthase, N-terminal domain FJN13_11340 PF02801 Beta-ketoacyl synthase, C-terminal domain FJN13_11345 PF13193 AMP-binding enzyme C-terminal domain FJN13_11345 PF00501 AMP-binding enzyme FJN13_11355 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FJN13_11355 PF01266 FAD dependent oxidoreductase FJN13_11390 PF13411 MerR HTH family regulatory protein FJN13_11395 PF00107 Zinc-binding dehydrogenase FJN13_11395 PF08240 Alcohol dehydrogenase GroES-like domain FJN13_11415 PF03466 LysR substrate binding domain FJN13_11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_11420 PF00440 Bacterial regulatory proteins, tetR family FJN13_11430 PF00106 short chain dehydrogenase FJN13_11470 PF03466 LysR substrate binding domain FJN13_11470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_11480 PF07690 Major Facilitator Superfamily FJN13_11510 PF00005 ABC transporter FJN13_11515 PF02667 Short chain fatty acid transporter FJN13_11520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_11520 PF01627 Hpt domain FJN13_11520 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJN13_11520 PF00072 Response regulator receiver domain FJN13_11520 PF00672 HAMP domain FJN13_11520 PF00512 His Kinase A (phospho-acceptor) domain FJN13_11525 PF02627 Carboxymuconolactone decarboxylase family FJN13_11530 PF05193 Peptidase M16 inactive domain FJN13_11530 PF00675 Insulinase (Peptidase family M16) FJN13_11545 PF04315 Elongation factor P hydroxylase FJN13_11580 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_11580 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FJN13_11585 PF00378 Enoyl-CoA hydratase/isomerase FJN13_11590 PF00440 Bacterial regulatory proteins, tetR family FJN13_11590 PF02909 Tetracyclin repressor-like, C-terminal domain FJN13_11595 PF05199 GMC oxidoreductase FJN13_11595 PF00732 GMC oxidoreductase FJN13_11605 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain FJN13_11605 PF06974 Protein of unknown function (DUF1298) FJN13_11615 PF04286 Protein of unknown function (DUF445) FJN13_11640 PF00326 Prolyl oligopeptidase family FJN13_11640 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FJN13_11645 PF07840 FadR C-terminal domain FJN13_11645 PF00392 Bacterial regulatory proteins, gntR family FJN13_11650 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FJN13_11655 PF02600 Disulfide bond formation protein DsbB FJN13_11660 PF13302 Acetyltransferase (GNAT) domain FJN13_11670 PF03692 Putative zinc- or iron-chelating domain FJN13_11675 PF01557 Fumarylacetoacetate (FAA) hydrolase family FJN13_11685 PF05166 YcgL domain FJN13_11690 PF01612 3'-5' exonuclease FJN13_11690 PF00570 HRDC domain FJN13_11695 PF00501 AMP-binding enzyme FJN13_11695 PF13193 AMP-binding enzyme C-terminal domain FJN13_11700 PF12697 Alpha/beta hydrolase family FJN13_11715 PF00814 Glycoprotease family FJN13_11720 PF13307 Helicase C-terminal domain FJN13_11720 PF06733 DEAD_2 FJN13_11745 PF00128 Alpha amylase, catalytic domain FJN13_11775 PF07715 TonB-dependent Receptor Plug Domain FJN13_11775 PF00593 TonB dependent receptor FJN13_11785 PF08029 HisG, C-terminal domain FJN13_11785 PF01634 ATP phosphoribosyltransferase FJN13_11790 PF00815 Histidinol dehydrogenase FJN13_11795 PF00155 Aminotransferase class I and II FJN13_11800 PF00475 Imidazoleglycerol-phosphate dehydratase FJN13_11805 PF00117 Glutamine amidotransferase class-I FJN13_11810 PF00977 Histidine biosynthesis protein FJN13_11815 PF00977 Histidine biosynthesis protein FJN13_11820 PF01502 Phosphoribosyl-AMP cyclohydrolase FJN13_11820 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FJN13_11825 PF01226 Formate/nitrite transporter FJN13_11830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_11830 PF00672 HAMP domain FJN13_11840 PF07715 TonB-dependent Receptor Plug Domain FJN13_11840 PF00593 TonB dependent receptor FJN13_11855 PF05191 Adenylate kinase, active site lid FJN13_11860 PF00183 Hsp90 protein FJN13_11860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_11865 PF02132 RecR protein FJN13_11865 PF13662 Toprim domain FJN13_11875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_11875 PF00512 His Kinase A (phospho-acceptor) domain FJN13_11875 PF08446 PAS fold FJN13_11875 PF00360 Phytochrome region FJN13_11875 PF01590 GAF domain FJN13_11880 PF02575 YbaB/EbfC DNA-binding family FJN13_11885 PF12169 DNA polymerase III subunits gamma and tau domain III FJN13_11885 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FJN13_11885 PF12170 DNA polymerase III tau subunit V interacting with alpha FJN13_11890 PF00156 Phosphoribosyl transferase domain FJN13_11900 PF05114 Protein of unknown function (DUF692) FJN13_11910 PF12704 MacB-like periplasmic core domain FJN13_11910 PF02687 FtsX-like permease family FJN13_11910 PF00005 ABC transporter FJN13_11920 PF01590 GAF domain FJN13_11920 PF00360 Phytochrome region FJN13_11920 PF00563 EAL domain FJN13_11920 PF00990 Diguanylate cyclase, GGDEF domain FJN13_11930 PF01066 CDP-alcohol phosphatidyltransferase FJN13_11950 PF01565 FAD binding domain FJN13_11950 PF09330 D-lactate dehydrogenase, membrane binding FJN13_11955 PF10431 C-terminal, D2-small domain, of ClpB protein FJN13_11955 PF17871 AAA lid domain FJN13_11955 PF07724 AAA domain (Cdc48 subfamily) FJN13_11955 PF00004 ATPase family associated with various cellular activities (AAA) FJN13_11955 PF02861 Clp amino terminal domain, pathogenicity island component FJN13_11965 PF01479 S4 domain FJN13_11965 PF00849 RNA pseudouridylate synthase FJN13_11970 PF13525 Outer membrane lipoprotein FJN13_11980 PF04545 Sigma-70, region 4 FJN13_11980 PF04542 Sigma-70 region 2 FJN13_11995 PF00106 short chain dehydrogenase FJN13_12015 PF00691 OmpA family FJN13_12015 PF13677 Membrane MotB of proton-channel complex MotA/MotB FJN13_12020 PF01618 MotA/TolQ/ExbB proton channel family FJN13_12025 PF02609 Exonuclease VII small subunit FJN13_12030 PF00348 Polyprenyl synthetase FJN13_12035 PF02780 Transketolase, C-terminal domain FJN13_12035 PF02779 Transketolase, pyrimidine binding domain FJN13_12035 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FJN13_12040 PF04608 Phosphatidylglycerophosphatase A FJN13_12045 PF00586 AIR synthase related protein, N-terminal domain FJN13_12045 PF02769 AIR synthase related protein, C-terminal domain FJN13_12050 PF01029 NusB family FJN13_12055 PF00885 6,7-dimethyl-8-ribityllumazine synthase FJN13_12060 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FJN13_12060 PF00925 GTP cyclohydrolase II FJN13_12065 PF00677 Lumazine binding domain FJN13_12070 PF01872 RibD C-terminal domain FJN13_12070 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FJN13_12075 PF03477 ATP cone domain FJN13_12080 PF00464 Serine hydroxymethyltransferase FJN13_12090 PF12848 ABC transporter FJN13_12090 PF00005 ABC transporter FJN13_12100 PF18073 Rubredoxin metal binding domain FJN13_12110 PF18429 Domain of unknown function (DUF5609) FJN13_12120 PF01026 TatD related DNase FJN13_12125 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FJN13_12125 PF01243 Pyridoxamine 5'-phosphate oxidase FJN13_12130 PF07650 KH domain FJN13_12130 PF01926 50S ribosome-binding GTPase FJN13_12135 PF14622 Ribonuclease-III-like FJN13_12135 PF00035 Double-stranded RNA binding motif FJN13_12140 PF10502 Signal peptidase, peptidase S26 FJN13_12145 PF03144 Elongation factor Tu domain 2 FJN13_12145 PF00679 Elongation factor G C-terminus FJN13_12145 PF00009 Elongation factor Tu GTP binding domain FJN13_12145 PF06421 GTP-binding protein LepA C-terminus FJN13_12155 PF03888 MucB/RseB N-terminal domain FJN13_12155 PF17188 MucB/RseB C-terminal domain FJN13_12165 PF04542 Sigma-70 region 2 FJN13_12165 PF08281 Sigma-70, region 4 FJN13_12170 PF00890 FAD binding domain FJN13_12170 PF02910 Fumarate reductase flavoprotein C-term FJN13_12185 PF03937 Flavinator of succinate dehydrogenase FJN13_12195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FJN13_12200 PF00543 Nitrogen regulatory protein P-II FJN13_12205 PF02540 NAD synthase FJN13_12240 PF07963 Prokaryotic N-terminal methylation motif FJN13_12240 PF00114 Pilin (bacterial filament) FJN13_12265 PF02401 LytB protein FJN13_12270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FJN13_12275 PF01252 Signal peptidase (SPase) II FJN13_12280 PF06827 Zinc finger found in FPG and IleRS FJN13_12280 PF08264 Anticodon-binding domain of tRNA FJN13_12280 PF00133 tRNA synthetases class I (I, L, M and V) FJN13_12285 PF06574 FAD synthetase FJN13_12285 PF01687 Riboflavin kinase FJN13_12290 PF03023 Lipid II flippase MurJ FJN13_12295 PF01649 Ribosomal protein S20 FJN13_12300 PF00106 short chain dehydrogenase FJN13_12315 PF01758 Sodium Bile acid symporter family FJN13_12320 PF03466 LysR substrate binding domain FJN13_12320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_12340 PF01546 Peptidase family M20/M25/M40 FJN13_12340 PF07687 Peptidase dimerisation domain FJN13_12345 PF13145 PPIC-type PPIASE domain FJN13_12350 PF00216 Bacterial DNA-binding protein FJN13_12355 PF02190 ATP-dependent protease La (LON) substrate-binding domain FJN13_12355 PF00004 ATPase family associated with various cellular activities (AAA) FJN13_12355 PF05362 Lon protease (S16) C-terminal proteolytic domain FJN13_12360 PF07724 AAA domain (Cdc48 subfamily) FJN13_12360 PF10431 C-terminal, D2-small domain, of ClpB protein FJN13_12360 PF06689 ClpX C4-type zinc finger FJN13_12365 PF00574 Clp protease FJN13_12370 PF05698 Bacterial trigger factor protein (TF) C-terminus FJN13_12370 PF05697 Bacterial trigger factor protein (TF) FJN13_12370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FJN13_12415 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FJN13_12415 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FJN13_12425 PF18389 TrmO C-terminal domain FJN13_12425 PF01980 tRNA-methyltransferase O FJN13_12430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FJN13_12430 PF03129 Anticodon binding domain FJN13_12435 PF00753 Metallo-beta-lactamase superfamily FJN13_12435 PF12706 Beta-lactamase superfamily domain FJN13_12440 PF02253 Phospholipase A1 FJN13_12445 PF00850 Histone deacetylase domain FJN13_12450 PF02743 Cache domain FJN13_12450 PF00672 HAMP domain FJN13_12450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_12455 PF00117 Glutamine amidotransferase class-I FJN13_12455 PF00958 GMP synthase C terminal domain FJN13_12455 PF02540 NAD synthase FJN13_12460 PF00571 CBS domain FJN13_12460 PF00478 IMP dehydrogenase / GMP reductase domain FJN13_12465 PF02601 Exonuclease VII, large subunit FJN13_12465 PF13742 OB-fold nucleic acid binding domain FJN13_12480 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FJN13_12480 PF01926 50S ribosome-binding GTPase FJN13_12485 PF13360 PQQ-like domain FJN13_12490 PF09976 Tetratricopeptide repeat-like domain FJN13_12495 PF13393 Histidyl-tRNA synthetase FJN13_12495 PF03129 Anticodon binding domain FJN13_12500 PF04551 GcpE protein FJN13_12505 PF13464 Domain of unknown function (DUF4115) FJN13_12515 PF04055 Radical SAM superfamily FJN13_12520 PF00334 Nucleoside diphosphate kinase FJN13_12525 PF02657 Fe-S metabolism associated domain FJN13_12530 PF01883 Iron-sulfur cluster assembly protein FJN13_12535 PF01521 Iron-sulphur cluster biosynthesis FJN13_12540 PF00266 Aminotransferase class-V FJN13_12545 PF01458 Uncharacterized protein family (UPF0051) FJN13_12550 PF00005 ABC transporter FJN13_12555 PF01458 Uncharacterized protein family (UPF0051) FJN13_12560 PF00266 Aminotransferase class-V FJN13_12565 PF02082 Transcriptional regulator FJN13_12570 PF00743 Flavin-binding monooxygenase-like FJN13_12575 PF00132 Bacterial transferase hexapeptide (six repeats) FJN13_12575 PF06426 Serine acetyltransferase, N-terminal FJN13_12580 PF00588 SpoU rRNA Methylase family FJN13_12585 PF00459 Inositol monophosphatase family FJN13_12600 PF02355 Protein export membrane protein FJN13_12600 PF07549 SecD/SecF GG Motif FJN13_12605 PF13721 SecD export protein N-terminal TM region FJN13_12605 PF02355 Protein export membrane protein FJN13_12605 PF07549 SecD/SecF GG Motif FJN13_12610 PF02699 Preprotein translocase subunit FJN13_12615 PF01702 Queuine tRNA-ribosyltransferase FJN13_12620 PF02547 Queuosine biosynthesis protein FJN13_12635 PF04012 PspA/IM30 family FJN13_12640 PF07885 Ion channel FJN13_12655 PF06693 Protein of unknown function (DUF1190) FJN13_12660 PF03738 Glutathionylspermidine synthase preATP-grasp FJN13_12675 PF00005 ABC transporter FJN13_12690 PF04960 Glutaminase FJN13_12695 PF00245 Alkaline phosphatase FJN13_12700 PF00072 Response regulator receiver domain FJN13_12705 PF00463 Isocitrate lyase family FJN13_12710 PF03466 LysR substrate binding domain FJN13_12710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_12715 PF01274 Malate synthase FJN13_12725 PF01370 NAD dependent epimerase/dehydratase family FJN13_12745 PF13180 PDZ domain FJN13_12760 PF02913 FAD linked oxidases, C-terminal domain FJN13_12760 PF01565 FAD binding domain FJN13_12785 PF00132 Bacterial transferase hexapeptide (six repeats) FJN13_12785 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FJN13_12785 PF14602 Hexapeptide repeat of succinyl-transferase FJN13_12805 PF00534 Glycosyl transferases group 1 FJN13_12805 PF13439 Glycosyltransferase Family 4 FJN13_12820 PF13537 Glutamine amidotransferase domain FJN13_12820 PF00733 Asparagine synthase FJN13_12835 PF04230 Polysaccharide pyruvyl transferase FJN13_12870 PF01757 Acyltransferase family FJN13_12900 PF13439 Glycosyltransferase Family 4 FJN13_12900 PF00534 Glycosyl transferases group 1 FJN13_12905 PF01757 Acyltransferase family FJN13_12915 PF01522 Polysaccharide deacetylase FJN13_12920 PF02397 Bacterial sugar transferase FJN13_12935 PF13614 AAA domain FJN13_12945 PF01471 Putative peptidoglycan binding domain FJN13_12945 PF13401 AAA domain FJN13_12950 PF00294 pfkB family carbohydrate kinase FJN13_12950 PF01467 Cytidylyltransferase-like FJN13_12955 PF01541 GIY-YIG catalytic domain FJN13_12970 PF08335 GlnD PII-uridylyltransferase FJN13_12970 PF03710 Glutamate-ammonia ligase adenylyltransferase FJN13_12980 PF03279 Bacterial lipid A biosynthesis acyltransferase FJN13_12995 PF09317 Domain of unknown function (DUF1974) FJN13_12995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FJN13_12995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FJN13_12995 PF02770 Acyl-CoA dehydrogenase, middle domain FJN13_13000 PF07715 TonB-dependent Receptor Plug Domain FJN13_13000 PF04886 PT repeat FJN13_13000 PF00593 TonB dependent receptor FJN13_13010 PF00990 Diguanylate cyclase, GGDEF domain FJN13_13010 PF03707 Bacterial signalling protein N terminal repeat FJN13_13010 PF13188 PAS domain FJN13_13010 PF00563 EAL domain FJN13_13015 PF00265 Thymidine kinase FJN13_13025 PF00356 Bacterial regulatory proteins, lacI family FJN13_13060 PF01926 50S ribosome-binding GTPase FJN13_13065 PF00588 SpoU rRNA Methylase family FJN13_13065 PF08032 RNA 2'-O ribose methyltransferase substrate binding FJN13_13085 PF00171 Aldehyde dehydrogenase family FJN13_13090 PF00732 GMC oxidoreductase FJN13_13090 PF05199 GMC oxidoreductase FJN13_13105 PF05971 RNA methyltransferase FJN13_13110 PF00376 MerR family regulatory protein FJN13_13110 PF09278 MerR, DNA binding FJN13_13140 PF02770 Acyl-CoA dehydrogenase, middle domain FJN13_13140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FJN13_13140 PF18158 Adaptive response protein AidB N-terminal domain FJN13_13165 PF00486 Transcriptional regulatory protein, C terminal FJN13_13165 PF00072 Response regulator receiver domain FJN13_13170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_13170 PF00512 His Kinase A (phospho-acceptor) domain FJN13_13170 PF00672 HAMP domain FJN13_13170 PF16527 Two-component sensor protein CpxA, periplasmic domain FJN13_13180 PF03965 Penicillinase repressor FJN13_13185 PF03544 Gram-negative bacterial TonB protein C-terminal FJN13_13200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FJN13_13210 PF00111 2Fe-2S iron-sulfur cluster binding domain FJN13_13210 PF01799 [2Fe-2S] binding domain FJN13_13215 PF00941 FAD binding domain in molybdopterin dehydrogenase FJN13_13215 PF03450 CO dehydrogenase flavoprotein C-terminal domain FJN13_13220 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FJN13_13220 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FJN13_13245 PF00106 short chain dehydrogenase FJN13_13250 PF01965 DJ-1/PfpI family FJN13_13255 PF03631 Virulence factor BrkB FJN13_13270 PF07152 YaeQ protein FJN13_13300 PF07690 Major Facilitator Superfamily FJN13_13305 PF06827 Zinc finger found in FPG and IleRS FJN13_13305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FJN13_13305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FJN13_13325 PF16124 RecQ zinc-binding FJN13_13325 PF00570 HRDC domain FJN13_13325 PF09382 RQC domain FJN13_13325 PF00271 Helicase conserved C-terminal domain FJN13_13325 PF00270 DEAD/DEAH box helicase FJN13_13345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJN13_13345 PF01627 Hpt domain FJN13_13345 PF00512 His Kinase A (phospho-acceptor) domain FJN13_13345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_13345 PF00672 HAMP domain FJN13_13345 PF00072 Response regulator receiver domain FJN13_13355 PF00512 His Kinase A (phospho-acceptor) domain FJN13_13355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_13355 PF01590 GAF domain FJN13_13355 PF00360 Phytochrome region FJN13_13355 PF08446 PAS fold FJN13_13360 PF07995 Glucose / Sorbosone dehydrogenase FJN13_13390 PF00271 Helicase conserved C-terminal domain FJN13_13390 PF08494 DEAD/H associated FJN13_13390 PF00270 DEAD/DEAH box helicase FJN13_13420 PF01597 Glycine cleavage H-protein FJN13_13425 PF08669 Glycine cleavage T-protein C-terminal barrel domain FJN13_13425 PF01571 Aminomethyltransferase folate-binding domain FJN13_13430 PF01979 Amidohydrolase family FJN13_13435 PF01869 BadF/BadG/BcrA/BcrD ATPase family FJN13_13440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_13440 PF03466 LysR substrate binding domain FJN13_13445 PF02652 L-lactate permease FJN13_13455 PF00557 Metallopeptidase family M24 FJN13_13455 PF01321 Creatinase/Prolidase N-terminal domain FJN13_13470 PF01494 FAD binding domain FJN13_13475 PF01494 FAD binding domain FJN13_13480 PF05195 Aminopeptidase P, N-terminal domain FJN13_13480 PF00557 Metallopeptidase family M24 FJN13_13485 PF03695 Uncharacterised protein family (UPF0149) FJN13_13495 PF00294 pfkB family carbohydrate kinase FJN13_13500 PF01156 Inosine-uridine preferring nucleoside hydrolase FJN13_13505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_13505 PF00497 Bacterial extracellular solute-binding proteins, family 3 FJN13_13505 PF00072 Response regulator receiver domain FJN13_13505 PF00989 PAS fold FJN13_13505 PF01627 Hpt domain FJN13_13505 PF00512 His Kinase A (phospho-acceptor) domain FJN13_13510 PF01812 5-formyltetrahydrofolate cyclo-ligase family FJN13_13515 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FJN13_13520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FJN13_13520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FJN13_13520 PF01842 ACT domain FJN13_13540 PF06945 Protein of unknown function (DUF1289) FJN13_13550 PF00873 AcrB/AcrD/AcrF family FJN13_13555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJN13_13560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_13560 PF03466 LysR substrate binding domain FJN13_13575 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_13575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FJN13_13580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FJN13_13580 PF02817 e3 binding domain FJN13_13580 PF00364 Biotin-requiring enzyme FJN13_13585 PF17831 Pyruvate dehydrogenase E1 component middle domain FJN13_13585 PF00456 Transketolase, thiamine diphosphate binding domain FJN13_13590 PF07729 FCD domain FJN13_13590 PF00392 Bacterial regulatory proteins, gntR family FJN13_13600 PF01510 N-acetylmuramoyl-L-alanine amidase FJN13_13610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FJN13_13610 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FJN13_13615 PF07963 Prokaryotic N-terminal methylation motif FJN13_13615 PF00114 Pilin (bacterial filament) FJN13_13620 PF00482 Type II secretion system (T2SS), protein F FJN13_13625 PF06750 Bacterial Peptidase A24 N-terminal domain FJN13_13625 PF01478 Type IV leader peptidase family FJN13_13630 PF01121 Dephospho-CoA kinase FJN13_13635 PF07072 Cell division protein FJN13_13645 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FJN13_13650 PF00293 NUDIX domain FJN13_13655 PF01043 SecA preprotein cross-linking domain FJN13_13655 PF02810 SEC-C motif FJN13_13655 PF07517 SecA DEAD-like domain FJN13_13655 PF07516 SecA Wing and Scaffold domain FJN13_13660 PF08525 Opacity-associated protein A N-terminal motif FJN13_13660 PF01551 Peptidase family M23 FJN13_13660 PF01476 LysM domain FJN13_13665 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FJN13_13670 PF12327 FtsZ family, C-terminal domain FJN13_13670 PF00091 Tubulin/FtsZ family, GTPase domain FJN13_13675 PF02491 SHS2 domain inserted in FTSA FJN13_13680 PF03799 Cell division protein FtsQ FJN13_13680 PF08478 POTRA domain, FtsQ-type FJN13_13685 PF07478 D-ala D-ala ligase C-terminus FJN13_13685 PF01820 D-ala D-ala ligase N-terminus FJN13_13690 PF01225 Mur ligase family, catalytic domain FJN13_13690 PF08245 Mur ligase middle domain FJN13_13690 PF02875 Mur ligase family, glutamate ligase domain FJN13_13695 PF03033 Glycosyltransferase family 28 N-terminal domain FJN13_13695 PF04101 Glycosyltransferase family 28 C-terminal domain FJN13_13700 PF01098 Cell cycle protein FJN13_13705 PF08245 Mur ligase middle domain FJN13_13705 PF02875 Mur ligase family, glutamate ligase domain FJN13_13710 PF00953 Glycosyl transferase family 4 FJN13_13710 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FJN13_13715 PF08245 Mur ligase middle domain FJN13_13715 PF02875 Mur ligase family, glutamate ligase domain FJN13_13715 PF01225 Mur ligase family, catalytic domain FJN13_13720 PF08245 Mur ligase middle domain FJN13_13720 PF02875 Mur ligase family, glutamate ligase domain FJN13_13720 PF01225 Mur ligase family, catalytic domain FJN13_13725 PF00905 Penicillin binding protein transpeptidase domain FJN13_13725 PF03717 Penicillin-binding Protein dimerisation domain FJN13_13730 PF04999 Cell division protein FtsL FJN13_13735 PF01795 MraW methylase family FJN13_13740 PF02381 MraZ protein, putative antitoxin-like FJN13_13760 PF00873 AcrB/AcrD/AcrF family FJN13_13765 PF00529 HlyD membrane-fusion protein of T1SS FJN13_13765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FJN13_13785 PF00462 Glutaredoxin FJN13_13785 PF08534 Redoxin FJN13_13790 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FJN13_13800 PF00990 Diguanylate cyclase, GGDEF domain FJN13_13800 PF17158 Membrane-associated sensor, integral membrane domain FJN13_13810 PF00158 Sigma-54 interaction domain FJN13_13810 PF00072 Response regulator receiver domain FJN13_13810 PF02954 Bacterial regulatory protein, Fis family FJN13_13815 PF00512 His Kinase A (phospho-acceptor) domain FJN13_13815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_13815 PF09456 RcsC Alpha-Beta-Loop (ABL) FJN13_13815 PF00072 Response regulator receiver domain FJN13_13820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FJN13_13820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FJN13_13825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FJN13_13825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FJN13_13830 PF07690 Major Facilitator Superfamily FJN13_13855 PF00924 Mechanosensitive ion channel FJN13_13855 PF05552 Conserved TM helix FJN13_13860 PF04452 RNA methyltransferase FJN13_13865 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FJN13_13865 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FJN13_13870 PF02622 Uncharacterized ACR, COG1678 FJN13_13875 PF03652 Holliday junction resolvase FJN13_13885 PF00437 Type II/IV secretion system protein FJN13_13890 PF00437 Type II/IV secretion system protein FJN13_13895 PF01168 Alanine racemase, N-terminal domain FJN13_13900 PF14748 Pyrroline-5-carboxylate reductase dimerisation FJN13_13900 PF03807 NADP oxidoreductase coenzyme F420-dependent FJN13_13905 PF02325 YGGT family FJN13_13915 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_13915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FJN13_13930 PF02798 Glutathione S-transferase, N-terminal domain FJN13_13930 PF14834 Glutathione S-transferase, C-terminal domain FJN13_13935 PF00080 Copper/zinc superoxide dismutase (SODC) FJN13_13940 PF02566 OsmC-like protein FJN13_13960 PF03591 AzlC protein FJN13_13970 PF07690 Major Facilitator Superfamily FJN13_13975 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) FJN13_13980 PF03883 Peroxide stress protein YaaA FJN13_13985 PF00923 Transaldolase/Fructose-6-phosphate aldolase FJN13_13990 PF00342 Phosphoglucose isomerase FJN13_14000 PF03167 Uracil DNA glycosylase superfamily FJN13_14005 PF14821 Threonine synthase N terminus FJN13_14005 PF00291 Pyridoxal-phosphate dependent enzyme FJN13_14010 PF00288 GHMP kinases N terminal domain FJN13_14010 PF08544 GHMP kinases C terminal FJN13_14015 PF01842 ACT domain FJN13_14015 PF00696 Amino acid kinase family FJN13_14015 PF03447 Homoserine dehydrogenase, NAD binding domain FJN13_14015 PF13840 ACT domain FJN13_14015 PF00742 Homoserine dehydrogenase FJN13_14020 PF17755 UvrA DNA-binding domain FJN13_14025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_14025 PF03466 LysR substrate binding domain FJN13_14030 PF00107 Zinc-binding dehydrogenase FJN13_14030 PF08240 Alcohol dehydrogenase GroES-like domain FJN13_14040 PF01022 Bacterial regulatory protein, arsR family FJN13_14050 PF03358 NADPH-dependent FMN reductase FJN13_14055 PF01758 Sodium Bile acid symporter family FJN13_14060 PF00072 Response regulator receiver domain FJN13_14060 PF01339 CheB methylesterase FJN13_14065 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FJN13_14070 PF00486 Transcriptional regulatory protein, C terminal FJN13_14070 PF00072 Response regulator receiver domain FJN13_14075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_14075 PF00672 HAMP domain FJN13_14075 PF00512 His Kinase A (phospho-acceptor) domain FJN13_14090 PF00291 Pyridoxal-phosphate dependent enzyme FJN13_14100 PF04116 Fatty acid hydroxylase superfamily FJN13_14120 PF03435 Saccharopine dehydrogenase NADP binding domain FJN13_14120 PF16653 Saccharopine dehydrogenase C-terminal domain FJN13_14125 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FJN13_14135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FJN13_14140 PF04348 LppC putative lipoprotein FJN13_14145 PF02021 Uncharacterised protein family UPF0102 FJN13_14150 PF00534 Glycosyl transferases group 1 FJN13_14155 PF13580 SIS domain FJN13_14160 PF04972 BON domain FJN13_14165 PF07690 Major Facilitator Superfamily FJN13_14175 PF00893 Small Multidrug Resistance protein FJN13_14180 PF07730 Histidine kinase FJN13_14185 PF00196 Bacterial regulatory proteins, luxR family FJN13_14185 PF00072 Response regulator receiver domain FJN13_14200 PF00593 TonB dependent receptor FJN13_14200 PF07715 TonB-dependent Receptor Plug Domain FJN13_14215 PF00285 Citrate synthase, C-terminal domain FJN13_14220 PF00330 Aconitase family (aconitate hydratase) FJN13_14220 PF00694 Aconitase C-terminal domain FJN13_14225 PF04303 PrpF protein FJN13_14230 PF00990 Diguanylate cyclase, GGDEF domain FJN13_14235 PF00474 Sodium:solute symporter family FJN13_14250 PF00072 Response regulator receiver domain FJN13_14250 PF00989 PAS fold FJN13_14250 PF01627 Hpt domain FJN13_14250 PF18415 Histidine kinase receptor ArcB trans-membrane domain FJN13_14250 PF00512 His Kinase A (phospho-acceptor) domain FJN13_14250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_14255 PF01510 N-acetylmuramoyl-L-alanine amidase FJN13_14260 PF00310 Glutamine amidotransferases class-II FJN13_14260 PF04898 Glutamate synthase central domain FJN13_14260 PF01645 Conserved region in glutamate synthase FJN13_14260 PF01493 GXGXG motif FJN13_14265 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FJN13_14265 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_14285 PF01048 Phosphorylase superfamily FJN13_14290 PF03186 CobD/Cbib protein FJN13_14295 PF01497 Periplasmic binding protein FJN13_14315 PF01266 FAD dependent oxidoreductase FJN13_14320 PF07237 Protein of unknown function (DUF1428) FJN13_14325 PF00579 tRNA synthetases class I (W and Y) FJN13_14330 PF01551 Peptidase family M23 FJN13_14330 PF01476 LysM domain FJN13_14335 PF03702 Anhydro-N-acetylmuramic acid kinase FJN13_14340 PF07690 Major Facilitator Superfamily FJN13_14350 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FJN13_14360 PF01053 Cys/Met metabolism PLP-dependent enzyme FJN13_14365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FJN13_14365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FJN13_14370 PF00043 Glutathione S-transferase, C-terminal domain FJN13_14370 PF13417 Glutathione S-transferase, N-terminal domain FJN13_14375 PF01521 Iron-sulphur cluster biosynthesis FJN13_14385 PF03976 Polyphosphate kinase 2 (PPK2) FJN13_14390 PF03776 Septum formation topological specificity factor MinE FJN13_14395 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FJN13_14400 PF03775 Septum formation inhibitor MinC, C-terminal domain FJN13_14400 PF05209 Septum formation inhibitor MinC, N-terminal domain FJN13_14405 PF00206 Lyase FJN13_14405 PF10415 Fumarase C C-terminus FJN13_14410 PF00127 Copper binding proteins, plastocyanin/azurin family FJN13_14445 PF01566 Natural resistance-associated macrophage protein FJN13_14450 PF00155 Aminotransferase class I and II FJN13_14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_14455 PF00512 His Kinase A (phospho-acceptor) domain FJN13_14455 PF08448 PAS fold FJN13_14455 PF00072 Response regulator receiver domain FJN13_14455 PF13188 PAS domain FJN13_14465 PF00120 Glutamine synthetase, catalytic domain FJN13_14465 PF03951 Glutamine synthetase, beta-Grasp domain FJN13_14475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_14475 PF00989 PAS fold FJN13_14475 PF00512 His Kinase A (phospho-acceptor) domain FJN13_14480 PF00072 Response regulator receiver domain FJN13_14480 PF00158 Sigma-54 interaction domain FJN13_14480 PF02954 Bacterial regulatory protein, Fis family FJN13_14485 PF00072 Response regulator receiver domain FJN13_14585 PF00144 Beta-lactamase FJN13_14625 PF01553 Acyltransferase FJN13_14630 PF06877 Regulator of ribonuclease activity B FJN13_14640 PF00990 Diguanylate cyclase, GGDEF domain FJN13_14640 PF17158 Membrane-associated sensor, integral membrane domain FJN13_14660 PF00072 Response regulator receiver domain FJN13_14660 PF01627 Hpt domain FJN13_14660 PF00512 His Kinase A (phospho-acceptor) domain FJN13_14660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_14660 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FJN13_14660 PF00672 HAMP domain FJN13_14665 PF00133 tRNA synthetases class I (I, L, M and V) FJN13_14665 PF08264 Anticodon-binding domain of tRNA FJN13_14665 PF10458 Valyl tRNA synthetase tRNA binding arm FJN13_14670 PF04364 DNA polymerase III chi subunit, HolC FJN13_14675 PF02789 Cytosol aminopeptidase family, N-terminal domain FJN13_14675 PF00883 Cytosol aminopeptidase family, catalytic domain FJN13_14680 PF03739 Lipopolysaccharide export system permease LptF/LptG FJN13_14685 PF03739 Lipopolysaccharide export system permease LptF/LptG FJN13_14700 PF04545 Sigma-70, region 4 FJN13_14700 PF04542 Sigma-70 region 2 FJN13_14745 PF00689 Cation transporting ATPase, C-terminus FJN13_14745 PF00690 Cation transporter/ATPase, N-terminus FJN13_14755 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FJN13_14755 PF10091 Putative glucoamylase FJN13_14755 PF06165 Glycosyltransferase family 36 FJN13_14765 PF00990 Diguanylate cyclase, GGDEF domain FJN13_14765 PF13185 GAF domain FJN13_14795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FJN13_14795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FJN13_14800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_14800 PF01627 Hpt domain FJN13_14800 PF00072 Response regulator receiver domain FJN13_14800 PF00497 Bacterial extracellular solute-binding proteins, family 3 FJN13_14800 PF00512 His Kinase A (phospho-acceptor) domain FJN13_14805 PF01594 AI-2E family transporter FJN13_14820 PF00005 ABC transporter FJN13_14825 PF01032 FecCD transport family FJN13_14830 PF01497 Periplasmic binding protein FJN13_14840 PF07715 TonB-dependent Receptor Plug Domain FJN13_14840 PF00593 TonB dependent receptor FJN13_14850 PF00230 Major intrinsic protein FJN13_14855 PF00892 EamA-like transporter family FJN13_14870 PF07715 TonB-dependent Receptor Plug Domain FJN13_14870 PF00593 TonB dependent receptor FJN13_14885 PF00753 Metallo-beta-lactamase superfamily FJN13_14885 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FJN13_14885 PF10996 Beta-Casp domain FJN13_14890 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FJN13_14895 PF00557 Metallopeptidase family M24 FJN13_14895 PF01321 Creatinase/Prolidase N-terminal domain FJN13_14900 PF05221 S-adenosyl-L-homocysteine hydrolase FJN13_14900 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FJN13_14905 PF00072 Response regulator receiver domain FJN13_14905 PF00990 Diguanylate cyclase, GGDEF domain FJN13_14910 PF03547 Membrane transport protein FJN13_14915 PF07940 Heparinase II/III-like protein FJN13_14915 PF05426 Alginate lyase FJN13_14920 PF13419 Haloacid dehalogenase-like hydrolase FJN13_14925 PF00005 ABC transporter FJN13_14925 PF08402 TOBE domain FJN13_14930 PF00528 Binding-protein-dependent transport system inner membrane component FJN13_14935 PF00528 Binding-protein-dependent transport system inner membrane component FJN13_14950 PF12697 Alpha/beta hydrolase family FJN13_14955 PF13360 PQQ-like domain FJN13_14955 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FJN13_14980 PF00005 ABC transporter FJN13_14990 PF00883 Cytosol aminopeptidase family, catalytic domain FJN13_14990 PF02789 Cytosol aminopeptidase family, N-terminal domain FJN13_14995 PF08042 PqqA family FJN13_15000 PF12706 Beta-lactamase superfamily domain FJN13_15005 PF03070 TENA/THI-4/PQQC family FJN13_15010 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FJN13_15015 PF04055 Radical SAM superfamily FJN13_15015 PF13186 Iron-sulfur cluster-binding domain FJN13_15040 PF00072 Response regulator receiver domain FJN13_15040 PF00196 Bacterial regulatory proteins, luxR family FJN13_15045 PF00512 His Kinase A (phospho-acceptor) domain FJN13_15045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_15055 PF12801 4Fe-4S binding domain FJN13_15055 PF04205 FMN-binding domain FJN13_15060 PF00171 Aldehyde dehydrogenase family FJN13_15065 PF00072 Response regulator receiver domain FJN13_15065 PF00196 Bacterial regulatory proteins, luxR family FJN13_15070 PF05231 MASE1 FJN13_15070 PF07730 Histidine kinase FJN13_15070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_15075 PF03466 LysR substrate binding domain FJN13_15080 PF00171 Aldehyde dehydrogenase family FJN13_15085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FJN13_15085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FJN13_15100 PF02028 BCCT, betaine/carnitine/choline family transporter FJN13_15115 PF07715 TonB-dependent Receptor Plug Domain FJN13_15115 PF00593 TonB dependent receptor FJN13_15125 PF01565 FAD binding domain FJN13_15125 PF09330 D-lactate dehydrogenase, membrane binding FJN13_15130 PF00196 Bacterial regulatory proteins, luxR family FJN13_15135 PF03783 Curli production assembly/transport component CsgG FJN13_15160 PF00082 Subtilase family FJN13_15165 PF00072 Response regulator receiver domain FJN13_15165 PF00196 Bacterial regulatory proteins, luxR family FJN13_15175 PF00106 short chain dehydrogenase FJN13_15190 PF00270 DEAD/DEAH box helicase FJN13_15190 PF00271 Helicase conserved C-terminal domain FJN13_15195 PF08447 PAS fold FJN13_15195 PF08448 PAS fold FJN13_15195 PF00990 Diguanylate cyclase, GGDEF domain FJN13_15195 PF00563 EAL domain FJN13_15210 PF01081 KDPG and KHG aldolase FJN13_15215 PF00294 pfkB family carbohydrate kinase FJN13_15220 PF14592 Chondroitinase B FJN13_15225 PF00392 Bacterial regulatory proteins, gntR family FJN13_15225 PF07729 FCD domain FJN13_15230 PF12794 Mechanosensitive ion channel inner membrane domain 1 FJN13_15230 PF12795 Mechanosensitive ion channel porin domain FJN13_15230 PF00924 Mechanosensitive ion channel FJN13_15240 PF00141 Peroxidase FJN13_15260 PF03466 LysR substrate binding domain FJN13_15260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_15270 PF01925 Sulfite exporter TauE/SafE FJN13_15280 PF00072 Response regulator receiver domain FJN13_15280 PF08769 Sporulation initiation factor Spo0A C terminal FJN13_15290 PF00512 His Kinase A (phospho-acceptor) domain FJN13_15290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_15300 PF03104 DNA polymerase family B, exonuclease domain FJN13_15300 PF00136 DNA polymerase family B FJN13_15310 PF00501 AMP-binding enzyme FJN13_15310 PF13193 AMP-binding enzyme C-terminal domain FJN13_15325 PF05958 tRNA (Uracil-5-)-methyltransferase FJN13_15330 PF00440 Bacterial regulatory proteins, tetR family FJN13_15340 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_15340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FJN13_15350 PF03167 Uracil DNA glycosylase superfamily FJN13_15355 PF03707 Bacterial signalling protein N terminal repeat FJN13_15355 PF00990 Diguanylate cyclase, GGDEF domain FJN13_15355 PF00563 EAL domain FJN13_15365 PF01507 Phosphoadenosine phosphosulfate reductase family FJN13_15370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FJN13_15370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FJN13_15375 PF00667 FAD binding domain FJN13_15375 PF00175 Oxidoreductase NAD-binding domain FJN13_15375 PF00258 Flavodoxin FJN13_15395 PF04024 PspC domain FJN13_15400 PF04012 PspA/IM30 family FJN13_15410 PF01207 Dihydrouridine synthase (Dus) FJN13_15430 PF00534 Glycosyl transferases group 1 FJN13_15445 PF02709 N-terminal domain of galactosyltransferase FJN13_15445 PF00535 Glycosyl transferase family 2 FJN13_15455 PF01389 OmpA-like transmembrane domain FJN13_15455 PF00691 OmpA family FJN13_15460 PF02190 ATP-dependent protease La (LON) substrate-binding domain FJN13_15460 PF05362 Lon protease (S16) C-terminal proteolytic domain FJN13_15460 PF00004 ATPase family associated with various cellular activities (AAA) FJN13_15465 PF03707 Bacterial signalling protein N terminal repeat FJN13_15465 PF00990 Diguanylate cyclase, GGDEF domain FJN13_15465 PF00563 EAL domain FJN13_15470 PF00756 Putative esterase FJN13_15475 PF01553 Acyltransferase FJN13_15480 PF01553 Acyltransferase FJN13_15485 PF00924 Mechanosensitive ion channel FJN13_15500 PF01370 NAD dependent epimerase/dehydratase family FJN13_15505 PF00209 Sodium:neurotransmitter symporter family FJN13_15510 PF00106 short chain dehydrogenase FJN13_15520 PF01625 Peptide methionine sulfoxide reductase FJN13_15535 PF00258 Flavodoxin FJN13_15545 PF02472 Biopolymer transport protein ExbD/TolR FJN13_15560 PF13181 Tetratricopeptide repeat FJN13_15560 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FJN13_15565 PF01270 Glycosyl hydrolases family 8 FJN13_15575 PF07238 PilZ domain FJN13_15575 PF00535 Glycosyl transferase family 2 FJN13_15575 PF03552 Cellulose synthase FJN13_15590 PF05175 Methyltransferase small domain FJN13_15595 PF13460 NAD(P)H-binding FJN13_15600 PF00326 Prolyl oligopeptidase family FJN13_15600 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region FJN13_15605 PF08000 Bacterial PH domain FJN13_15610 PF00990 Diguanylate cyclase, GGDEF domain FJN13_15610 PF08448 PAS fold FJN13_15610 PF00563 EAL domain FJN13_15615 PF00291 Pyridoxal-phosphate dependent enzyme FJN13_15620 PF07969 Amidohydrolase family FJN13_15630 PF00753 Metallo-beta-lactamase superfamily FJN13_15640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_15640 PF03466 LysR substrate binding domain FJN13_15645 PF13230 Glutamine amidotransferases class-II FJN13_15655 PF05360 yiaA/B two helix domain FJN13_15675 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FJN13_15680 PF00593 TonB dependent receptor FJN13_15680 PF07715 TonB-dependent Receptor Plug Domain FJN13_15685 PF00171 Aldehyde dehydrogenase family FJN13_15690 PF01613 Flavin reductase like domain FJN13_15695 PF00881 Nitroreductase family FJN13_15700 PF00561 alpha/beta hydrolase fold FJN13_15705 PF01042 Endoribonuclease L-PSP FJN13_15710 PF00857 Isochorismatase family FJN13_15715 PF00296 Luciferase-like monooxygenase FJN13_15720 PF00440 Bacterial regulatory proteins, tetR family FJN13_15720 PF08362 YcdC-like protein, C-terminal region FJN13_15730 PF09905 DNA-binding protein VF530 FJN13_15735 PF16123 Hydroxyacylglutathione hydrolase C-terminus FJN13_15735 PF00753 Metallo-beta-lactamase superfamily FJN13_15745 PF00817 impB/mucB/samB family FJN13_15745 PF11799 impB/mucB/samB family C-terminal domain FJN13_15745 PF11798 IMS family HHH motif FJN13_15750 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH FJN13_15765 PF02424 ApbE family FJN13_15770 PF00175 Oxidoreductase NAD-binding domain FJN13_15770 PF00111 2Fe-2S iron-sulfur cluster binding domain FJN13_15770 PF00970 Oxidoreductase FAD-binding domain FJN13_15775 PF02508 Rnf-Nqr subunit, membrane protein FJN13_15780 PF02508 Rnf-Nqr subunit, membrane protein FJN13_15785 PF04205 FMN-binding domain FJN13_15790 PF03116 NQR2, RnfD, RnfE family FJN13_15795 PF11973 NQRA C-terminal domain FJN13_15795 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FJN13_15800 PF07055 Enoyl reductase FAD binding domain FJN13_15800 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FJN13_15800 PF12241 Trans-2-enoyl-CoA reductase catalytic region FJN13_15805 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FJN13_15805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FJN13_15810 PF00311 Phosphoenolpyruvate carboxylase FJN13_15815 PF00141 Peroxidase FJN13_15825 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FJN13_15825 PF00056 lactate/malate dehydrogenase, NAD binding domain FJN13_15830 PF01316 Arginine repressor, DNA binding domain FJN13_15830 PF02863 Arginine repressor, C-terminal domain FJN13_15855 PF00485 Phosphoribulokinase / Uridine kinase family FJN13_15860 PF07670 Nucleoside recognition FJN13_15860 PF01773 Na+ dependent nucleoside transporter N-terminus FJN13_15860 PF07662 Na+ dependent nucleoside transporter C-terminus FJN13_15880 PF00072 Response regulator receiver domain FJN13_15880 PF00990 Diguanylate cyclase, GGDEF domain FJN13_15885 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJN13_15885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJN13_15885 PF00929 Exonuclease FJN13_15885 PF02811 PHP domain FJN13_15885 PF14579 Helix-hairpin-helix motif FJN13_15890 PF00571 CBS domain FJN13_15895 PF00474 Sodium:solute symporter family FJN13_15905 PF00512 His Kinase A (phospho-acceptor) domain FJN13_15905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_15905 PF07689 KaiB domain FJN13_15915 PF08443 RimK-like ATP-grasp domain FJN13_15915 PF18030 RimK PreATP-grasp domain FJN13_15925 PF18030 RimK PreATP-grasp domain FJN13_15925 PF08443 RimK-like ATP-grasp domain FJN13_15935 PF00196 Bacterial regulatory proteins, luxR family FJN13_15935 PF00072 Response regulator receiver domain FJN13_15950 PF02690 Na+/Pi-cotransporter FJN13_15955 PF00248 Aldo/keto reductase family FJN13_15965 PF00082 Subtilase family FJN13_15980 PF00069 Protein kinase domain FJN13_15980 PF03793 PASTA domain FJN13_15985 PF07730 Histidine kinase FJN13_15985 PF17200 Single Cache domain 2 FJN13_15990 PF00072 Response regulator receiver domain FJN13_15990 PF00196 Bacterial regulatory proteins, luxR family FJN13_15995 PF00082 Subtilase family FJN13_16020 PF16655 PhoD-like phosphatase, N-terminal domain FJN13_16020 PF09423 PhoD-like phosphatase FJN13_16030 PF00199 Catalase FJN13_16030 PF06628 Catalase-related immune-responsive FJN13_16065 PF03309 Type III pantothenate kinase FJN13_16070 PF02237 Biotin protein ligase C terminal domain FJN13_16070 PF08279 HTH domain FJN13_16070 PF03099 Biotin/lipoate A/B protein ligase family FJN13_16075 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FJN13_16075 PF01565 FAD binding domain FJN13_16080 PF13426 PAS domain FJN13_16080 PF08447 PAS fold FJN13_16080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_16100 PF03412 Peptidase C39 family FJN13_16100 PF00005 ABC transporter FJN13_16100 PF00664 ABC transporter transmembrane region FJN13_16105 PF03466 LysR substrate binding domain FJN13_16105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_16130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FJN13_16130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FJN13_16130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FJN13_16135 PF16363 GDP-mannose 4,6 dehydratase FJN13_16140 PF04321 RmlD substrate binding domain FJN13_16145 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FJN13_16150 PF00483 Nucleotidyl transferase FJN13_16160 PF02709 N-terminal domain of galactosyltransferase FJN13_16160 PF00535 Glycosyl transferase family 2 FJN13_16230 PF16385 Domain of unknown function FJN13_16230 PF00884 Sulfatase FJN13_16245 PF00535 Glycosyl transferase family 2 FJN13_16250 PF01050 Mannose-6-phosphate isomerase FJN13_16250 PF00483 Nucleotidyl transferase FJN13_16255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FJN13_16255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FJN13_16255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FJN13_16255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FJN13_16260 PF00669 Bacterial flagellin N-terminal helical region FJN13_16260 PF00700 Bacterial flagellin C-terminal helical region FJN13_16265 PF01196 Ribosomal protein L17 FJN13_16270 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FJN13_16270 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FJN13_16270 PF01000 RNA polymerase Rpb3/RpoA insert domain FJN13_16275 PF01479 S4 domain FJN13_16275 PF00163 Ribosomal protein S4/S9 N-terminal domain FJN13_16280 PF00411 Ribosomal protein S11 FJN13_16285 PF00416 Ribosomal protein S13/S18 FJN13_16290 PF00444 Ribosomal protein L36 FJN13_16295 PF00344 SecY translocase FJN13_16300 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FJN13_16305 PF00327 Ribosomal protein L30p/L7e FJN13_16310 PF03719 Ribosomal protein S5, C-terminal domain FJN13_16310 PF00333 Ribosomal protein S5, N-terminal domain FJN13_16315 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FJN13_16320 PF00347 Ribosomal protein L6 FJN13_16325 PF00410 Ribosomal protein S8 FJN13_16330 PF00253 Ribosomal protein S14p/S29e FJN13_16335 PF00281 Ribosomal protein L5 FJN13_16335 PF00673 ribosomal L5P family C-terminus FJN13_16340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FJN13_16340 PF00467 KOW motif FJN13_16345 PF00238 Ribosomal protein L14p/L23e FJN13_16350 PF09308 LuxQ, periplasmic FJN13_16350 PF00512 His Kinase A (phospho-acceptor) domain FJN13_16350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_16350 PF00072 Response regulator receiver domain FJN13_16365 PF00588 SpoU rRNA Methylase family FJN13_16365 PF08032 RNA 2'-O ribose methyltransferase substrate binding FJN13_16370 PF00575 S1 RNA binding domain FJN13_16370 PF00773 RNB domain FJN13_16370 PF08206 Ribonuclease B OB domain FJN13_16370 PF08461 Ribonuclease R winged-helix domain FJN13_16370 PF17876 Cold shock domain FJN13_16385 PF09423 PhoD-like phosphatase FJN13_16385 PF16655 PhoD-like phosphatase, N-terminal domain FJN13_16405 PF08238 Sel1 repeat FJN13_16415 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FJN13_16420 PF00970 Oxidoreductase FAD-binding domain FJN13_16420 PF00175 Oxidoreductase NAD-binding domain FJN13_16430 PF04389 Peptidase family M28 FJN13_16440 PF08446 PAS fold FJN13_16440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_16440 PF01590 GAF domain FJN13_16440 PF00512 His Kinase A (phospho-acceptor) domain FJN13_16440 PF00360 Phytochrome region FJN13_16450 PF01654 Cytochrome bd terminal oxidase subunit I FJN13_16455 PF02322 Cytochrome bd terminal oxidase subunit II FJN13_16460 PF01037 Lrp/AsnC ligand binding domain FJN13_16470 PF00313 'Cold-shock' DNA-binding domain FJN13_16475 PF03109 ABC1 family FJN13_16485 PF01209 ubiE/COQ5 methyltransferase family FJN13_16495 PF01432 Peptidase family M3 FJN13_16500 PF00072 Response regulator receiver domain FJN13_16510 PF00512 His Kinase A (phospho-acceptor) domain FJN13_16510 PF00989 PAS fold FJN13_16510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_16515 PF00158 Sigma-54 interaction domain FJN13_16515 PF02954 Bacterial regulatory protein, Fis family FJN13_16515 PF00072 Response regulator receiver domain FJN13_16520 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_16520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FJN13_16525 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FJN13_16525 PF00384 Molybdopterin oxidoreductase FJN13_16525 PF01568 Molydopterin dinucleotide binding domain FJN13_16530 PF07676 WD40-like Beta Propeller Repeat FJN13_16530 PF00326 Prolyl oligopeptidase family FJN13_16580 PF00005 ABC transporter FJN13_16580 PF00664 ABC transporter transmembrane region FJN13_16580 PF03412 Peptidase C39 family FJN13_16585 PF00196 Bacterial regulatory proteins, luxR family FJN13_16585 PF00072 Response regulator receiver domain FJN13_16595 PF18030 RimK PreATP-grasp domain FJN13_16595 PF08443 RimK-like ATP-grasp domain FJN13_16610 PF00004 ATPase family associated with various cellular activities (AAA) FJN13_16610 PF07724 AAA domain (Cdc48 subfamily) FJN13_16615 PF00227 Proteasome subunit FJN13_16620 PF05036 Sporulation related domain FJN13_16625 PF00270 DEAD/DEAH box helicase FJN13_16625 PF00271 Helicase conserved C-terminal domain FJN13_16625 PF17764 3′ DNA-binding domain (3′BD) FJN13_16625 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FJN13_16625 PF18074 Primosomal protein N C-terminal domain FJN13_16630 PF01197 Ribosomal protein L31 FJN13_16640 PF00390 Malic enzyme, N-terminal domain FJN13_16640 PF03949 Malic enzyme, NAD binding domain FJN13_16645 PF01340 Met Apo-repressor, MetJ FJN13_16650 PF02219 Methylenetetrahydrofolate reductase FJN13_16655 PF03631 Virulence factor BrkB FJN13_16670 PF00561 alpha/beta hydrolase fold FJN13_16675 PF02580 D-Tyr-tRNA(Tyr) deacylase FJN13_16680 PF00583 Acetyltransferase (GNAT) family FJN13_16680 PF09500 Putative thioesterase (yiiD_Cterm) FJN13_16685 PF04545 Sigma-70, region 4 FJN13_16685 PF04542 Sigma-70 region 2 FJN13_16685 PF00140 Sigma-70 factor, region 1.2 FJN13_16690 PF08668 HDOD domain FJN13_16690 PF00563 EAL domain FJN13_16695 PF00563 EAL domain FJN13_16695 PF08668 HDOD domain FJN13_16700 PF18075 FtsX extracellular domain FJN13_16705 PF00005 ABC transporter FJN13_16710 PF02881 SRP54-type protein, helical bundle domain FJN13_16710 PF00448 SRP54-type protein, GTPase domain FJN13_16725 PF01914 MarC family integral membrane protein FJN13_16735 PF12404 Peptidase FJN13_16735 PF00883 Cytosol aminopeptidase family, catalytic domain FJN13_16740 PF03749 Sugar fermentation stimulation protein RE domain FJN13_16740 PF17746 SfsA N-terminal OB domain FJN13_16745 PF01258 Prokaryotic dksA/traR C4-type zinc finger FJN13_16750 PF00749 tRNA synthetases class I (E and Q), catalytic domain FJN13_16755 PF01743 Poly A polymerase head domain FJN13_16755 PF12626 Polymerase A arginine-rich C-terminus FJN13_16755 PF12627 Probable RNA and SrmB- binding site of polymerase A FJN13_16760 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FJN13_16765 PF02548 Ketopantoate hydroxymethyltransferase FJN13_16770 PF02569 Pantoate-beta-alanine ligase FJN13_16775 PF00282 Pyridoxal-dependent decarboxylase conserved domain FJN13_16790 PF01061 ABC-2 type transporter FJN13_16795 PF00005 ABC transporter FJN13_16800 PF00486 Transcriptional regulatory protein, C terminal FJN13_16800 PF00072 Response regulator receiver domain FJN13_16805 PF00672 HAMP domain FJN13_16805 PF00512 His Kinase A (phospho-acceptor) domain FJN13_16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_16810 PF07715 TonB-dependent Receptor Plug Domain FJN13_16810 PF00593 TonB dependent receptor FJN13_16815 PF13640 2OG-Fe(II) oxygenase superfamily FJN13_16815 PF18331 PKHD-type hydroxylase C-terminal domain FJN13_16835 PF00571 CBS domain FJN13_16835 PF01595 Cyclin M transmembrane N-terminal domain FJN13_16845 PF13722 5TM C-terminal transporter carbon starvation CstA FJN13_16845 PF02554 Carbon starvation protein CstA FJN13_16855 PF07859 alpha/beta hydrolase fold FJN13_16855 PF00934 PE family FJN13_16870 PF00009 Elongation factor Tu GTP binding domain FJN13_16870 PF03144 Elongation factor Tu domain 2 FJN13_16870 PF14492 Elongation Factor G, domain II FJN13_16870 PF00679 Elongation factor G C-terminus FJN13_16870 PF03764 Elongation factor G, domain IV FJN13_16875 PF00177 Ribosomal protein S7p/S5e FJN13_16880 PF00164 Ribosomal protein S12/S23 FJN13_16885 PF04983 RNA polymerase Rpb1, domain 3 FJN13_16885 PF00623 RNA polymerase Rpb1, domain 2 FJN13_16885 PF04998 RNA polymerase Rpb1, domain 5 FJN13_16885 PF05000 RNA polymerase Rpb1, domain 4 FJN13_16885 PF04997 RNA polymerase Rpb1, domain 1 FJN13_16890 PF00562 RNA polymerase Rpb2, domain 6 FJN13_16890 PF04560 RNA polymerase Rpb2, domain 7 FJN13_16890 PF04565 RNA polymerase Rpb2, domain 3 FJN13_16890 PF04561 RNA polymerase Rpb2, domain 2 FJN13_16890 PF10385 RNA polymerase beta subunit external 1 domain FJN13_16890 PF04563 RNA polymerase beta subunit FJN13_16895 PF16320 Ribosomal protein L7/L12 dimerisation domain FJN13_16895 PF00542 Ribosomal protein L7/L12 C-terminal domain FJN13_16900 PF00466 Ribosomal protein L10 FJN13_16905 PF00687 Ribosomal protein L1p/L10e family FJN13_16910 PF03946 Ribosomal protein L11, N-terminal domain FJN13_16910 PF00298 Ribosomal protein L11, RNA binding domain FJN13_16925 PF02357 Transcription termination factor nusG FJN13_16925 PF00467 KOW motif FJN13_16930 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FJN13_16940 PF00005 ABC transporter FJN13_16940 PF00664 ABC transporter transmembrane region FJN13_16945 PF03737 Aldolase/RraA FJN13_16950 PF01431 Peptidase family M13 FJN13_16950 PF05649 Peptidase family M13 FJN13_16960 PF00270 DEAD/DEAH box helicase FJN13_16960 PF03880 DbpA RNA binding domain FJN13_16960 PF00271 Helicase conserved C-terminal domain FJN13_16965 PF01979 Amidohydrolase family FJN13_16970 PF08212 Lipocalin-like domain FJN13_16975 PF00248 Aldo/keto reductase family FJN13_16980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FJN13_16985 PF05552 Conserved TM helix FJN13_16985 PF00924 Mechanosensitive ion channel FJN13_16990 PF07690 Major Facilitator Superfamily FJN13_16995 PF00128 Alpha amylase, catalytic domain FJN13_17005 PF01227 GTP cyclohydrolase I FJN13_17015 PF04371 Porphyromonas-type peptidyl-arginine deiminase FJN13_17020 PF00795 Carbon-nitrogen hydrolase FJN13_17030 PF00271 Helicase conserved C-terminal domain FJN13_17030 PF00270 DEAD/DEAH box helicase FJN13_17030 PF08494 DEAD/H associated FJN13_17040 PF04679 ATP dependent DNA ligase C terminal region FJN13_17040 PF04675 DNA ligase N terminus FJN13_17040 PF01068 ATP dependent DNA ligase domain FJN13_17045 PF08207 Elongation factor P (EF-P) KOW-like domain FJN13_17045 PF09285 Elongation factor P, C-terminal FJN13_17045 PF01132 Elongation factor P (EF-P) OB domain FJN13_17050 PF00294 pfkB family carbohydrate kinase FJN13_17060 PF02310 B12 binding domain FJN13_17060 PF02607 B12 binding domain FJN13_17060 PF02574 Homocysteine S-methyltransferase FJN13_17060 PF00809 Pterin binding enzyme FJN13_17060 PF02965 Vitamin B12 dependent methionine synthase, activation domain FJN13_17065 PF00043 Glutathione S-transferase, C-terminal domain FJN13_17065 PF02798 Glutathione S-transferase, N-terminal domain FJN13_17070 PF02798 Glutathione S-transferase, N-terminal domain FJN13_17080 PF00561 alpha/beta hydrolase fold FJN13_17095 PF00171 Aldehyde dehydrogenase family FJN13_17100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FJN13_17100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FJN13_17100 PF00205 Thiamine pyrophosphate enzyme, central domain FJN13_17110 PF00762 Ferrochelatase FJN13_17115 PF03806 AbgT putative transporter family FJN13_17120 PF01145 SPFH domain / Band 7 family FJN13_17125 PF01145 SPFH domain / Band 7 family FJN13_17125 PF12221 Bacterial membrane protein N terminal FJN13_17130 PF01926 50S ribosome-binding GTPase FJN13_17130 PF13167 GTP-binding GTPase N-terminal FJN13_17130 PF16360 GTP-binding GTPase Middle Region FJN13_17135 PF17209 Hfq protein FJN13_17145 PF08676 MutL C terminal dimerisation domain FJN13_17145 PF01119 DNA mismatch repair protein, C-terminal domain FJN13_17150 PF01520 N-acetylmuramoyl-L-alanine amidase FJN13_17155 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FJN13_17160 PF01256 Carbohydrate kinase FJN13_17160 PF03853 YjeF-related protein N-terminus FJN13_17165 PF08331 Domain of unknown function (DUF1730) FJN13_17175 PF01208 Uroporphyrinogen decarboxylase (URO-D) FJN13_17180 PF00293 NUDIX domain FJN13_17180 PF09297 NADH pyrophosphatase zinc ribbon domain FJN13_17185 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FJN13_17190 PF01475 Ferric uptake regulator family FJN13_17200 PF01894 Uncharacterised protein family UPF0047 FJN13_17205 PF05736 OprF membrane domain FJN13_17205 PF00691 OmpA family FJN13_17210 PF03796 DnaB-like helicase C terminal domain FJN13_17210 PF00772 DnaB-like helicase N terminal domain FJN13_17235 PF03475 3-alpha domain FJN13_17235 PF03473 MOSC domain FJN13_17250 PF00072 Response regulator receiver domain FJN13_17250 PF00486 Transcriptional regulatory protein, C terminal FJN13_17255 PF16750 Sensor domain of 2-component histidine kinase FJN13_17255 PF00512 His Kinase A (phospho-acceptor) domain FJN13_17255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_17255 PF00672 HAMP domain FJN13_17275 PF00873 AcrB/AcrD/AcrF family FJN13_17280 PF03948 Ribosomal protein L9, C-terminal domain FJN13_17280 PF01281 Ribosomal protein L9, N-terminal domain FJN13_17285 PF01084 Ribosomal protein S18 FJN13_17290 PF01250 Ribosomal protein S6 FJN13_17295 PF00512 His Kinase A (phospho-acceptor) domain FJN13_17295 PF00072 Response regulator receiver domain FJN13_17295 PF01627 Hpt domain FJN13_17295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_17295 PF00672 HAMP domain FJN13_17305 PF00005 ABC transporter FJN13_17315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_17315 PF08447 PAS fold FJN13_17320 PF00512 His Kinase A (phospho-acceptor) domain FJN13_17320 PF13426 PAS domain FJN13_17320 PF13188 PAS domain FJN13_17320 PF00989 PAS fold FJN13_17320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_17325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FJN13_17325 PF00672 HAMP domain FJN13_17325 PF02743 Cache domain FJN13_17340 PF03601 Conserved hypothetical protein 698 FJN13_17345 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FJN13_17350 PF00248 Aldo/keto reductase family FJN13_17370 PF00474 Sodium:solute symporter family FJN13_17375 PF00593 TonB dependent receptor FJN13_17375 PF07715 TonB-dependent Receptor Plug Domain FJN13_17380 PF16916 Dimerisation domain of Zinc Transporter FJN13_17380 PF01545 Cation efflux family FJN13_17385 PF00722 Glycosyl hydrolases family 16 FJN13_17400 PF14310 Fibronectin type III-like domain FJN13_17400 PF00933 Glycosyl hydrolase family 3 N terminal domain FJN13_17400 PF01915 Glycosyl hydrolase family 3 C-terminal domain FJN13_17405 PF07690 Major Facilitator Superfamily FJN13_17410 PF00232 Glycosyl hydrolase family 1 FJN13_17415 PF00356 Bacterial regulatory proteins, lacI family FJN13_17420 PF00083 Sugar (and other) transporter FJN13_17425 PF00664 ABC transporter transmembrane region FJN13_17425 PF00005 ABC transporter FJN13_17430 PF00664 ABC transporter transmembrane region FJN13_17430 PF00005 ABC transporter FJN13_17435 PF08173 Membrane bound YbgT-like protein FJN13_17440 PF02322 Cytochrome bd terminal oxidase subunit II FJN13_17445 PF01654 Cytochrome bd terminal oxidase subunit I FJN13_17455 PF02954 Bacterial regulatory protein, Fis family FJN13_17455 PF00072 Response regulator receiver domain FJN13_17455 PF00158 Sigma-54 interaction domain FJN13_17475 PF13474 SnoaL-like domain FJN13_17485 PF07715 TonB-dependent Receptor Plug Domain FJN13_17485 PF00593 TonB dependent receptor FJN13_17500 PF02649 Type I GTP cyclohydrolase folE2 FJN13_17515 PF08021 Siderophore-interacting FAD-binding domain FJN13_17515 PF04954 Siderophore-interacting protein FJN13_17520 PF05532 CsbD-like FJN13_17535 PF08281 Sigma-70, region 4 FJN13_17535 PF04542 Sigma-70 region 2 FJN13_17540 PF05922 Peptidase inhibitor I9 FJN13_17540 PF00082 Subtilase family FJN13_17560 PF00472 RF-1 domain FJN13_17565 PF00561 alpha/beta hydrolase fold FJN13_17565 PF00364 Biotin-requiring enzyme FJN13_17585 PF01292 Prokaryotic cytochrome b561 FJN13_17590 PF04264 YceI-like domain FJN13_17595 PF07992 Pyridine nucleotide-disulphide oxidoreductase FJN13_17600 PF07715 TonB-dependent Receptor Plug Domain FJN13_17600 PF00593 TonB dependent receptor FJN13_17610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_17610 PF03466 LysR substrate binding domain FJN13_17615 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FJN13_17620 PF16884 N-terminal domain of oxidoreductase FJN13_17620 PF00107 Zinc-binding dehydrogenase FJN13_17625 PF00360 Phytochrome region FJN13_17625 PF00563 EAL domain FJN13_17625 PF01590 GAF domain FJN13_17625 PF00990 Diguanylate cyclase, GGDEF domain FJN13_17630 PF00072 Response regulator receiver domain FJN13_17630 PF09308 LuxQ, periplasmic FJN13_17630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_17630 PF00512 His Kinase A (phospho-acceptor) domain FJN13_17640 PF00296 Luciferase-like monooxygenase FJN13_17645 PF01380 SIS domain FJN13_17650 PF00455 DeoR C terminal sensor domain FJN13_17650 PF08220 DeoR-like helix-turn-helix domain FJN13_17655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FJN13_17655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FJN13_17660 PF00132 Bacterial transferase hexapeptide (six repeats) FJN13_17660 PF14602 Hexapeptide repeat of succinyl-transferase FJN13_17660 PF12804 MobA-like NTP transferase domain FJN13_17670 PF00892 EamA-like transporter family FJN13_17675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FJN13_17675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FJN13_17680 PF00730 HhH-GPD superfamily base excision DNA repair protein FJN13_17680 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain FJN13_17685 PF00144 Beta-lactamase FJN13_17690 PF17944 Arginine decarboxylase C-terminal helical extension FJN13_17690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FJN13_17690 PF17810 Arginine decarboxylase helical bundle domain FJN13_17700 PF02233 NAD(P) transhydrogenase beta subunit FJN13_17705 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FJN13_17710 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FJN13_17710 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FJN13_17785 PF02796 Helix-turn-helix domain of resolvase FJN13_17785 PF00239 Resolvase, N terminal domain FJN13_17805 PF00118 TCP-1/cpn60 chaperonin family FJN13_17810 PF00166 Chaperonin 10 Kd subunit FJN13_17815 PF04186 FxsA cytoplasmic membrane protein FJN13_17820 PF03091 CutA1 divalent ion tolerance protein FJN13_17825 PF11412 Disulphide bond corrector protein DsbC FJN13_17825 PF02683 Cytochrome C biogenesis protein transmembrane region FJN13_17830 PF01551 Peptidase family M23 FJN13_17835 PF01220 Dehydroquinase class II FJN13_17840 PF00364 Biotin-requiring enzyme FJN13_17845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FJN13_17845 PF02785 Biotin carboxylase C-terminal domain FJN13_17845 PF00289 Biotin carboxylase, N-terminal domain FJN13_17865 PF11490 DNA polymerase III polC-type N-terminus II FJN13_17865 PF02811 PHP domain FJN13_17865 PF14579 Helix-hairpin-helix motif FJN13_17865 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FJN13_17865 PF07733 Bacterial DNA polymerase III alpha NTPase domain FJN13_17865 PF00929 Exonuclease FJN13_17885 PF01355 High potential iron-sulfur protein FJN13_17890 PF01425 Amidase FJN13_17905 PF01207 Dihydrouridine synthase (Dus) FJN13_17910 PF02954 Bacterial regulatory protein, Fis family FJN13_17915 PF01808 AICARFT/IMPCHase bienzyme FJN13_17915 PF02142 MGS-like domain FJN13_17925 PF02844 Phosphoribosylglycinamide synthetase, N domain FJN13_17925 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FJN13_17925 PF02843 Phosphoribosylglycinamide synthetase, C domain FJN13_17945 PF00027 Cyclic nucleotide-binding domain FJN13_17945 PF00520 Ion transport protein FJN13_17950 PF00485 Phosphoribulokinase / Uridine kinase family FJN13_17960 PF00072 Response regulator receiver domain FJN13_17960 PF00486 Transcriptional regulatory protein, C terminal FJN13_17965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_17965 PF00672 HAMP domain FJN13_17965 PF00512 His Kinase A (phospho-acceptor) domain FJN13_17975 PF17137 Domain of unknown function (DUF5110) FJN13_17975 PF13802 Galactose mutarotase-like FJN13_17975 PF16338 Domain of unknown function (DUF4968) FJN13_17975 PF01055 Glycosyl hydrolases family 31 FJN13_17985 PF01430 Hsp33 protein FJN13_17990 PF01479 S4 domain FJN13_17995 PF11356 Type II secretion system protein C FJN13_18000 PF03958 Bacterial type II/III secretion system short domain FJN13_18000 PF00263 Bacterial type II and III secretion system protein FJN13_18005 PF00437 Type II/IV secretion system protein FJN13_18010 PF00482 Type II secretion system (T2SS), protein F FJN13_18015 PF07963 Prokaryotic N-terminal methylation motif FJN13_18015 PF08334 Type II secretion system (T2SS), protein G FJN13_18020 PF12019 Type II transport protein GspH FJN13_18025 PF07963 Prokaryotic N-terminal methylation motif FJN13_18025 PF02501 Type II secretion system (T2SS), protein I FJN13_18030 PF11612 Type II secretion system (T2SS), protein J FJN13_18030 PF07963 Prokaryotic N-terminal methylation motif FJN13_18040 PF05134 Type II secretion system (T2SS), protein L FJN13_18040 PF12693 GspL periplasmic domain FJN13_18045 PF04612 Type II secretion system (T2SS), protein M FJN13_18065 PF00171 Aldehyde dehydrogenase family FJN13_18070 PF01931 Protein of unknown function DUF84 FJN13_18075 PF13419 Haloacid dehalogenase-like hydrolase FJN13_18080 PF00293 NUDIX domain FJN13_18085 PF00459 Inositol monophosphatase family FJN13_18100 PF04349 Periplasmic glucan biosynthesis protein, MdoG FJN13_18110 PF06794 Uncharacterised protein family (UPF0270) FJN13_18115 PF00561 alpha/beta hydrolase fold FJN13_18125 PF12848 ABC transporter FJN13_18125 PF00005 ABC transporter FJN13_18140 PF04102 SlyX FJN13_18150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FJN13_18150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FJN13_18160 PF03449 Transcription elongation factor, N-terminal FJN13_18160 PF01272 Transcription elongation factor, GreA/GreB, C-term FJN13_18165 PF00575 S1 RNA binding domain FJN13_18165 PF17674 HHH domain FJN13_18165 PF09371 Tex-like protein N-terminal domain FJN13_18165 PF16921 Tex protein YqgF-like domain FJN13_18185 PF00561 alpha/beta hydrolase fold FJN13_18190 PF00156 Phosphoribosyl transferase domain FJN13_18200 PF01106 NifU-like domain FJN13_18200 PF01521 Iron-sulphur cluster biosynthesis FJN13_18210 PF01177 Asp/Glu/Hydantoin racemase FJN13_18225 PF01554 MatE FJN13_18230 PF14883 Hypothetical glycosyl hydrolase family 13 FJN13_18230 PF01522 Polysaccharide deacetylase FJN13_18240 PF02630 SCO1/SenC FJN13_18245 PF01040 UbiA prenyltransferase family FJN13_18250 PF02628 Cytochrome oxidase assembly protein FJN13_18270 PF00510 Cytochrome c oxidase subunit III FJN13_18275 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FJN13_18280 PF00115 Cytochrome C and Quinol oxidase polypeptide I FJN13_18285 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FJN13_18285 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FJN13_18290 PF00717 Peptidase S24-like FJN13_18290 PF01726 LexA DNA binding domain FJN13_18295 PF01553 Acyltransferase FJN13_18300 PF00585 C-terminal regulatory domain of Threonine dehydratase FJN13_18300 PF00291 Pyridoxal-phosphate dependent enzyme FJN13_18305 PF00920 Dehydratase family FJN13_18320 PF03458 UPF0126 domain FJN13_18325 PF01078 Magnesium chelatase, subunit ChlI FJN13_18325 PF13335 Magnesium chelatase, subunit ChlI C-terminal FJN13_18330 PF03466 LysR substrate binding domain FJN13_18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FJN13_18335 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FJN13_18335 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FJN13_18340 PF07690 Major Facilitator Superfamily FJN13_18345 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) FJN13_18350 PF07244 Surface antigen variable number repeat FJN13_18350 PF17243 POTRA domain TamA domain 1 FJN13_18350 PF01103 Surface antigen FJN13_18355 PF04357 TamB, inner membrane protein subunit of TAM complex FJN13_18380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FJN13_18380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FJN13_18390 PF01472 PUA domain FJN13_18390 PF00696 Amino acid kinase family FJN13_18410 PF03109 ABC1 family FJN13_18435 PF01979 Amidohydrolase family FJN13_18460 PF01206 Sulfurtransferase TusA FJN13_18465 PF00156 Phosphoribosyl transferase domain FJN13_18470 PF03725 3' exoribonuclease family, domain 2 FJN13_18470 PF01138 3' exoribonuclease family, domain 1 FJN13_18475 PF08340 Domain of unknown function (DUF1732) FJN13_18475 PF03755 YicC-like family, N-terminal region FJN13_18485 PF13784 Fic/DOC family N-terminal FJN13_18485 PF02661 Fic/DOC family FJN13_18490 PF04820 Tryptophan halogenase FJN13_18505 PF00232 Glycosyl hydrolase family 1 FJN13_18515 PF00356 Bacterial regulatory proteins, lacI family FJN13_18525 PF05736 OprF membrane domain FJN13_18525 PF00691 OmpA family FJN13_18530 PF01966 HD domain FJN13_18545 PF00043 Glutathione S-transferase, C-terminal domain FJN13_18545 PF02798 Glutathione S-transferase, N-terminal domain FJN13_18555 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FJN13_18555 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FJN13_18560 PF02874 ATP synthase alpha/beta family, beta-barrel domain FJN13_18560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FJN13_18565 PF00231 ATP synthase FJN13_18570 PF00306 ATP synthase alpha/beta chain, C terminal domain FJN13_18570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FJN13_18570 PF02874 ATP synthase alpha/beta family, beta-barrel domain FJN13_18575 PF00213 ATP synthase delta (OSCP) subunit FJN13_18580 PF00430 ATP synthase B/B' CF(0) FJN13_18585 PF00137 ATP synthase subunit C FJN13_18590 PF00119 ATP synthase A chain FJN13_18600 PF02195 ParB-like nuclease domain FJN13_18600 PF17762 HTH domain found in ParB protein FJN13_18605 PF13614 AAA domain FJN13_18610 PF02527 rRNA small subunit methyltransferase G FJN13_18615 PF01134 Glucose inhibited division protein A FJN13_18615 PF13932 GidA associated domain FJN13_18630 PF00258 Flavodoxin FJN13_18635 PF10396 GTP-binding protein TrmE N-terminus FJN13_18635 PF12631 MnmE helical domain FJN13_18635 PF01926 50S ribosome-binding GTPase FJN13_18640 PF04461 Protein of unknown function (DUF520) FJN13_18645 PF02096 60Kd inner membrane protein FJN13_18645 PF14849 YidC periplasmic domain FJN13_18650 PF01809 Putative membrane protein insertion efficiency factor FJN13_18655 PF00825 Ribonuclease P FJN13_18660 PF00468 Ribosomal protein L34 FJN13_18665 PF11638 DnaA N-terminal domain FJN13_18665 PF00308 Bacterial dnaA protein FJN13_18665 PF08299 Bacterial dnaA protein helix-turn-helix FJN13_18670 PF02768 DNA polymerase III beta subunit, C-terminal domain FJN13_18670 PF00712 DNA polymerase III beta subunit, N-terminal domain FJN13_18670 PF02767 DNA polymerase III beta subunit, central domain FJN13_18675 PF02463 RecF/RecN/SMC N terminal domain FJN13_18680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FJN13_18680 PF00204 DNA gyrase B FJN13_18680 PF00986 DNA gyrase B subunit, carboxyl terminus FJN13_18680 PF18053 DNA gyrase B subunit insert domain FJN13_18680 PF01751 Toprim domain FJN13_18700 PF02092 Glycyl-tRNA synthetase beta subunit FJN13_18700 PF05746 DALR anticodon binding domain FJN13_18705 PF02091 Glycyl-tRNA synthetase alpha subunit FJN13_18710 PF03352 Methyladenine glycosylase FJN13_18720 PF04220 Der GTPase activator (YihI) FJN13_18730 PF00034 Cytochrome c FJN13_18735 PF01926 50S ribosome-binding GTPase FJN13_18740 PF01612 3'-5' exonuclease FJN13_18740 PF01367 5'-3' exonuclease, C-terminal SAM fold FJN13_18740 PF00476 DNA polymerase family A FJN13_18740 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FJN13_18750 PF02386 Cation transport protein FJN13_18755 PF02080 TrkA-C domain FJN13_18755 PF02254 TrkA-N domain FJN13_18760 PF01029 NusB family FJN13_18760 PF01189 16S rRNA methyltransferase RsmB/F FJN13_18765 PF00551 Formyl transferase FJN13_18765 PF02911 Formyl transferase, C-terminal domain FJN13_18770 PF01327 Polypeptide deformylase FJN13_18780 PF17782 DprA winged helix domain FJN13_18780 PF02481 DNA recombination-mediator protein A FJN13_18785 PF04361 Protein of unknown function (DUF494) FJN13_18795 PF01300 Telomere recombination FJN13_18800 PF01218 Coproporphyrinogen III oxidase FJN13_18805 PF03922 OmpW family FJN13_18815 PF08501 Shikimate dehydrogenase substrate binding domain FJN13_18815 PF01488 Shikimate / quinate 5-dehydrogenase FJN13_18815 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FJN13_18820 PF00132 Bacterial transferase hexapeptide (six repeats)