I876_00010 SM00382 ATPases associated with a variety of cellular activities I876_00010 SM00760 Bacterial dnaA protein helix-turn-helix domain I876_00015 SM00480 DNA polymerase III beta subunit I876_00025 SM00387 Histidine kinase-like ATPases I876_00025 SM00433 TopoisomeraseII I876_00035 SM00836 DALR anticodon binding domain I876_00075 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs I876_00075 SM00474 3'-5' exonuclease I876_00075 SM00475 5'-3' exonuclease I876_00075 SM00482 DNA polymerase A domain I876_00110 SM00257 Lysin motif I876_00190 SM00481 DNA polymerase alpha chain like domain I876_00280 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain I876_00280 SM01232 I876_00280 I876_00310 SM00052 Putative diguanylate phosphodiesterase I876_00310 SM00267 diguanylate cyclase I876_00320 SM00829 Enoylreductase I876_00325 SM00450 Rhodanese Homology Domain I876_00355 SM00530 Helix-turn-helix XRE-family like proteins I876_00370 SM00052 Putative diguanylate phosphodiesterase I876_00370 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_00370 SM00267 diguanylate cyclase I876_00385 SM00530 Helix-turn-helix XRE-family like proteins I876_00420 SM00849 Metallo-beta-lactamase superfamily I876_00445 SM00382 ATPases associated with a variety of cellular activities I876_00450 SM00382 ATPases associated with a variety of cellular activities I876_00470 SM00450 Rhodanese Homology Domain I876_00475 SM00849 Metallo-beta-lactamase superfamily I876_00495 SM00421 helix_turn_helix, Lux Regulon I876_00540 SM00487 DEAD-like helicases superfamily I876_00540 SM00490 helicase superfamily c-terminal domain I876_00555 SM00382 ATPases associated with a variety of cellular activities I876_00585 SM00849 Metallo-beta-lactamase superfamily I876_00610 SM00876 Biotin and Thiamin Synthesis associated domain I876_00660 SM00267 diguanylate cyclase I876_00675 SM00072 Guanylate kinase homologues. I876_00680 SM01409 I876_00680 I876_00685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I876_00685 SM00954 Region found in RelA / SpoT proteins I876_00700 SM00487 DEAD-like helicases superfamily I876_00700 SM00490 helicase superfamily c-terminal domain I876_00730 SM00382 ATPases associated with a variety of cellular activities I876_00770 SM00271 DnaJ molecular chaperone homology domain I876_00810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_00830 SM00052 Putative diguanylate phosphodiesterase I876_00830 SM00267 diguanylate cyclase I876_00845 SM00341 Helicase and RNase D C-terminal I876_00845 SM00487 DEAD-like helicases superfamily I876_00845 SM00490 helicase superfamily c-terminal domain I876_00845 SM00956 I876_00845 I876_00850 SM00924 MgtE intracellular N domain I876_00860 SM00267 diguanylate cyclase I876_00860 SM00448 cheY-homologous receiver domain I876_00870 SM00971 Serine acetyltransferase, N-terminal I876_00910 SM00014 Acid phosphatase homologues I876_00980 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I876_01005 SM00354 helix_turn _helix lactose operon repressor I876_01070 SM00420 helix_turn_helix, Deoxyribose operon repressor I876_01070 SM01134 I876_01070 I876_01110 SM00965 Secretin and TonB N terminus short domain I876_01120 SM00028 Tetratricopeptide repeats I876_01125 SM00382 ATPases associated with a variety of cellular activities I876_01195 SM00316 Ribosomal protein S1-like RNA-binding domain I876_01225 SM00342 helix_turn_helix, arabinose operon control protein I876_01230 SM01038 Beta galactosidase small chain I876_01235 SM00448 cheY-homologous receiver domain I876_01235 SM00862 Transcriptional regulatory protein, C terminal I876_01240 SM00387 Histidine kinase-like ATPases I876_01265 SM00478 endonuclease III I876_01265 SM00525 I876_01265 I876_01310 SM00857 Resolvase, N terminal domain I876_01320 SM00382 ATPases associated with a variety of cellular activities I876_01360 SM00382 ATPases associated with a variety of cellular activities I876_01380 SM00923 MbtH-like protein I876_01385 SM00823 Phosphopantetheine attachment site I876_01415 SM00822 I876_01415 I876_01415 SM00825 Beta-ketoacyl synthase I876_01420 SM00823 Phosphopantetheine attachment site I876_01445 SM00823 Phosphopantetheine attachment site I876_01565 SM00448 cheY-homologous receiver domain I876_01565 SM00862 Transcriptional regulatory protein, C terminal I876_01570 SM00387 Histidine kinase-like ATPases I876_01630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_01630 SM00387 Histidine kinase-like ATPases I876_01630 SM00388 His Kinase A (phosphoacceptor) domain I876_01635 SM00448 cheY-homologous receiver domain I876_01635 SM00862 Transcriptional regulatory protein, C terminal I876_01815 SM00422 helix_turn_helix, mercury resistance I876_01950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_01955 SM00448 cheY-homologous receiver domain I876_01960 SM00073 Histidine Phosphotransfer domain I876_01960 SM00260 Two component signalling adaptor domain I876_01960 SM00387 Histidine kinase-like ATPases I876_01960 SM01231 I876_01960 I876_01965 SM00260 Two component signalling adaptor domain I876_01970 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_01970 SM00091 PAS domain I876_01970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_01975 SM00138 Methyltransferase, chemotaxis proteins I876_01985 SM00448 cheY-homologous receiver domain I876_01990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_01995 SM00448 cheY-homologous receiver domain I876_02000 SM00073 Histidine Phosphotransfer domain I876_02000 SM00260 Two component signalling adaptor domain I876_02000 SM00387 Histidine kinase-like ATPases I876_02000 SM01231 I876_02000 I876_02005 SM00260 Two component signalling adaptor domain I876_02010 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_02010 SM00091 PAS domain I876_02010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_02010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_02015 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_02015 SM00091 PAS domain I876_02015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_02015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_02020 SM00138 Methyltransferase, chemotaxis proteins I876_02030 SM00448 cheY-homologous receiver domain I876_02045 SM00267 diguanylate cyclase I876_02065 SM00342 helix_turn_helix, arabinose operon control protein I876_02065 SM00387 Histidine kinase-like ATPases I876_02065 SM00388 His Kinase A (phosphoacceptor) domain I876_02065 SM00448 cheY-homologous receiver domain I876_02080 SM00354 helix_turn _helix lactose operon repressor I876_02130 SM00855 Phosphoglycerate mutase family I876_02145 SM00671 Sel1-like repeats. I876_02150 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_02150 SM00382 ATPases associated with a variety of cellular activities I876_02155 SM01403 I876_02155 I876_02175 SM01382 I876_02175 I876_02175 SM01383 I876_02175 I876_02190 SM00322 K homology RNA-binding domain I876_02240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_02240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_02265 SM00487 DEAD-like helicases superfamily I876_02265 SM00490 helicase superfamily c-terminal domain I876_02295 SM00342 helix_turn_helix, arabinose operon control protein I876_02305 SM00938 Nitrogen regulatory protein P-II I876_02325 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain I876_02360 SM00073 Histidine Phosphotransfer domain I876_02360 SM00387 Histidine kinase-like ATPases I876_02360 SM00388 His Kinase A (phosphoacceptor) domain I876_02360 SM00448 cheY-homologous receiver domain I876_02365 SM00434 DNA Topoisomerase IV I876_02385 SM01150 I876_02385 I876_02460 SM00965 Secretin and TonB N terminus short domain I876_02480 SM00842 Cell division protein FtsA I876_02490 SM00919 Malic enzyme, NAD binding domain I876_02490 SM01274 I876_02490 I876_02515 SM01060 I876_02515 I876_02530 SM00052 Putative diguanylate phosphodiesterase I876_02560 SM00859 Semialdehyde dehydrogenase, NAD binding domain I876_02565 SM00851 MGS-like domain I876_02575 SM00448 cheY-homologous receiver domain I876_02575 SM00862 Transcriptional regulatory protein, C terminal I876_02580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_02580 SM00387 Histidine kinase-like ATPases I876_02580 SM00388 His Kinase A (phosphoacceptor) domain I876_02615 SM00450 Rhodanese Homology Domain I876_02655 SM00479 I876_02655 I876_02720 SM00267 diguanylate cyclase I876_02725 SM01004 Delta-aminolevulinic acid dehydratase I876_02735 SM00487 DEAD-like helicases superfamily I876_02735 SM00490 helicase superfamily c-terminal domain I876_02745 SM00357 Cold shock protein domain I876_02745 SM00382 ATPases associated with a variety of cellular activities I876_02745 SM00959 Rho termination factor, N-terminal domain I876_02755 SM00387 Histidine kinase-like ATPases I876_02755 SM00388 His Kinase A (phosphoacceptor) domain I876_02755 SM00448 cheY-homologous receiver domain I876_02765 SM01001 AIR carboxylase I876_02820 SM00788 Adenylosuccinate synthetase I876_02870 SM01005 Alanine racemase, C-terminal domain I876_02895 SM00062 Bacterial periplasmic substrate-binding proteins I876_02925 SM00670 Large family of predicted nucleotide-binding domains I876_02940 SM00530 Helix-turn-helix XRE-family like proteins I876_03015 SM00849 Metallo-beta-lactamase superfamily I876_03085 SM00257 Lysin motif I876_03125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_03125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_03125 SM01049 I876_03125 I876_03145 SM00287 Bacterial SH3 domain homologues I876_03150 SM01118 I876_03150 I876_03160 SM00927 DNA mismatch repair enzyme MutH I876_03170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_03190 SM00448 cheY-homologous receiver domain I876_03195 SM00267 diguanylate cyclase I876_03220 SM00487 DEAD-like helicases superfamily I876_03220 SM00490 helicase superfamily c-terminal domain I876_03235 SM00670 Large family of predicted nucleotide-binding domains I876_03250 SM00487 DEAD-like helicases superfamily I876_03250 SM00490 helicase superfamily c-terminal domain I876_03255 SM00028 Tetratricopeptide repeats I876_03295 SM00387 Histidine kinase-like ATPases I876_03295 SM00433 TopoisomeraseII I876_03335 SM00841 Elongation factor P, C-terminal I876_03335 SM01185 I876_03335 I876_03390 SM00014 Acid phosphatase homologues I876_03400 SM01012 I876_03400 I876_03430 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I876_03445 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_03445 SM00091 PAS domain I876_03445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_03460 SM00382 ATPases associated with a variety of cellular activities I876_03520 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I876_03525 SM01007 Class II Aldolase and Adducin N-terminal domain I876_03555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_03555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_03565 SM00400 zinc finger I876_03565 SM00493 I876_03565 I876_03565 SM00766 DNA primase DnaG DnaB-binding I876_03595 SM01207 I876_03595 I876_03600 SM00905 Dihydroneopterin aldolase I876_03635 SM00530 Helix-turn-helix XRE-family like proteins I876_03645 SM00387 Histidine kinase-like ATPases I876_03650 SM00448 cheY-homologous receiver domain I876_03650 SM00862 Transcriptional regulatory protein, C terminal I876_03655 SM00387 Histidine kinase-like ATPases I876_03655 SM00388 His Kinase A (phosphoacceptor) domain I876_03665 SM00710 Parallel beta-helix repeats I876_03700 SM00028 Tetratricopeptide repeats I876_03705 SM00448 cheY-homologous receiver domain I876_03705 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I876_03710 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_03710 SM00091 PAS domain I876_03710 SM00387 Histidine kinase-like ATPases I876_03710 SM00388 His Kinase A (phosphoacceptor) domain I876_03710 SM00448 cheY-homologous receiver domain I876_03740 SM00479 I876_03740 I876_03775 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_03775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_03790 SM00650 Ribosomal RNA adenine dimethylases I876_03810 SM00271 DnaJ molecular chaperone homology domain I876_03855 SM00954 Region found in RelA / SpoT proteins I876_03885 SM00822 I876_03885 I876_03890 SM01236 I876_03890 I876_03935 SM00387 Histidine kinase-like ATPases I876_03935 SM00388 His Kinase A (phosphoacceptor) domain I876_03940 SM00448 cheY-homologous receiver domain I876_03940 SM00862 Transcriptional regulatory protein, C terminal I876_03985 SM00116 Domain in cystathionine beta-synthase and other proteins. I876_03985 SM00924 MgtE intracellular N domain I876_04015 SM00382 ATPases associated with a variety of cellular activities I876_04045 SM00382 ATPases associated with a variety of cellular activities I876_04080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I876_04085 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I876_04145 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_04145 SM00091 PAS domain I876_04145 SM00387 Histidine kinase-like ATPases I876_04145 SM00388 His Kinase A (phosphoacceptor) domain I876_04145 SM00448 cheY-homologous receiver domain I876_04170 SM00861 Transketolase, pyrimidine binding domain I876_04175 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I876_04245 SM00382 ATPases associated with a variety of cellular activities I876_04280 SM00347 helix_turn_helix multiple antibiotic resistance protein I876_04290 SM01263 I876_04290 I876_04345 SM00345 helix_turn_helix gluconate operon transcriptional repressor I876_04345 SM00866 I876_04345 I876_04385 SM00382 ATPases associated with a variety of cellular activities I876_04455 SM00850 LytTr DNA-binding domain I876_04470 SM00448 cheY-homologous receiver domain I876_04475 SM00091 PAS domain I876_04495 SM00729 Elongator protein 3, MiaB family, Radical SAM I876_04505 SM00487 DEAD-like helicases superfamily I876_04505 SM00490 helicase superfamily c-terminal domain I876_04515 SM00382 ATPases associated with a variety of cellular activities I876_04525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I876_04540 SM01329 I876_04540 I876_04545 SM00917 LeuA allosteric (dimerisation) domain I876_04555 SM01192 I876_04555 I876_04555 SM01193 I876_04555 I876_04565 SM00533 DNA-binding domain of DNA mismatch repair MUTS family I876_04565 SM00534 ATPase domain of DNA mismatch repair MUTS family I876_04575 SM00382 ATPases associated with a variety of cellular activities I876_04580 SM00382 ATPases associated with a variety of cellular activities I876_04600 SM00382 ATPases associated with a variety of cellular activities I876_04670 SM00382 ATPases associated with a variety of cellular activities I876_04710 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I876_04715 SM01329 I876_04715 I876_04735 SM00267 diguanylate cyclase I876_04795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I876_04840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I876_04850 SM00935 Outer membrane protein (OmpH-like) I876_04875 SM00481 DNA polymerase alpha chain like domain I876_04885 SM00977 TilS substrate C-terminal domain I876_04890 SM00267 diguanylate cyclase I876_04915 SM00062 Bacterial periplasmic substrate-binding proteins I876_04920 SM01211 I876_04920 I876_04990 SM00422 helix_turn_helix, mercury resistance I876_05055 SM00345 helix_turn_helix gluconate operon transcriptional repressor I876_05055 SM00866 I876_05055 I876_05080 SM00345 helix_turn_helix gluconate operon transcriptional repressor I876_05080 SM00866 I876_05080 I876_05130 SM00382 ATPases associated with a variety of cellular activities I876_05140 SM00421 helix_turn_helix, Lux Regulon I876_05175 SM00858 I876_05175 I876_05180 SM00260 Two component signalling adaptor domain I876_05180 SM00448 cheY-homologous receiver domain I876_05185 SM00138 Methyltransferase, chemotaxis proteins I876_05230 SM00047 Lysozyme subfamily 2 I876_05300 SM00858 I876_05300 I876_05330 SM00382 ATPases associated with a variety of cellular activities I876_05335 SM00387 Histidine kinase-like ATPases I876_05335 SM00388 His Kinase A (phosphoacceptor) domain I876_05340 SM00382 ATPases associated with a variety of cellular activities I876_05340 SM00448 cheY-homologous receiver domain I876_05365 SM00382 ATPases associated with a variety of cellular activities I876_05425 SM00382 ATPases associated with a variety of cellular activities I876_05425 SM00962 SRP54-type protein, GTPase domain I876_05440 SM00448 cheY-homologous receiver domain I876_05450 SM00073 Histidine Phosphotransfer domain I876_05450 SM00260 Two component signalling adaptor domain I876_05450 SM00387 Histidine kinase-like ATPases I876_05450 SM01231 I876_05450 I876_05455 SM00448 cheY-homologous receiver domain I876_05465 SM00260 Two component signalling adaptor domain I876_05470 SM00260 Two component signalling adaptor domain I876_05490 SM01018 B12 binding domain I876_05515 SM00947 Carbonic anhydrase I876_05550 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I876_05580 SM00382 ATPases associated with a variety of cellular activities I876_05585 SM00382 ATPases associated with a variety of cellular activities I876_05605 SM00382 ATPases associated with a variety of cellular activities I876_05630 SM00091 PAS domain I876_05630 SM00382 ATPases associated with a variety of cellular activities I876_05645 SM00344 helix_turn_helix ASNC type I876_05650 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I876_05675 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I876_05690 SM00028 Tetratricopeptide repeats I876_05700 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I876_05730 SM00028 Tetratricopeptide repeats I876_05810 SM00347 helix_turn_helix multiple antibiotic resistance protein I876_05835 SM00836 DALR anticodon binding domain I876_05835 SM01016 Arginyl tRNA synthetase N terminal dom I876_05865 SM00267 diguanylate cyclase I876_05900 SM00937 I876_05900 I876_05955 SM00463 Small MutS-related domain I876_05985 SM00763 PrkA AAA domain I876_06015 SM00965 Secretin and TonB N terminus short domain I876_06030 SM00479 I876_06030 I876_06050 SM00357 Cold shock protein domain I876_06065 SM00478 endonuclease III I876_06075 SM00900 I876_06075 I876_06105 SM00487 DEAD-like helicases superfamily I876_06105 SM00490 helicase superfamily c-terminal domain I876_06185 SM00267 diguanylate cyclase I876_06210 SM00028 Tetratricopeptide repeats I876_06215 SM00327 von Willebrand factor (vWF) type A domain I876_06255 SM00052 Putative diguanylate phosphodiesterase I876_06255 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_06255 SM00267 diguanylate cyclase I876_06265 SM00855 Phosphoglycerate mutase family I876_06275 SM01091 Transporter associated domain I876_06285 SM00382 ATPases associated with a variety of cellular activities I876_06285 SM00962 SRP54-type protein, GTPase domain I876_06285 SM00963 SRP54-type protein, helical bundle domain I876_06340 SM00382 ATPases associated with a variety of cellular activities I876_06390 SM00830 Chorismate mutase type II I876_06395 SM00830 Chorismate mutase type II I876_06400 SM00448 cheY-homologous receiver domain I876_06415 SM00331 Sigma factor PP2C-like phosphatases I876_06415 SM00448 cheY-homologous receiver domain I876_06425 SM00052 Putative diguanylate phosphodiesterase I876_06425 SM00267 diguanylate cyclase I876_06435 SM00387 Histidine kinase-like ATPases I876_06435 SM00388 His Kinase A (phosphoacceptor) domain I876_06445 SM00382 ATPases associated with a variety of cellular activities I876_06445 SM00448 cheY-homologous receiver domain I876_06455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_06480 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I876_06485 SM00382 ATPases associated with a variety of cellular activities I876_06550 SM00859 Semialdehyde dehydrogenase, NAD binding domain I876_06565 SM00267 diguanylate cyclase I876_06595 SM00116 Domain in cystathionine beta-synthase and other proteins. I876_06635 SM00267 diguanylate cyclase I876_06705 SM00729 Elongator protein 3, MiaB family, Radical SAM I876_06705 SM00876 Biotin and Thiamin Synthesis associated domain I876_06730 SM00226 Low molecular weight phosphatase family I876_06740 SM00382 ATPases associated with a variety of cellular activities I876_06760 SM00382 ATPases associated with a variety of cellular activities I876_06765 SM00729 Elongator protein 3, MiaB family, Radical SAM I876_06775 SM00028 Tetratricopeptide repeats I876_06775 SM00448 cheY-homologous receiver domain I876_06820 SM00382 ATPases associated with a variety of cellular activities I876_06835 SM00905 Dihydroneopterin aldolase I876_06845 SM00387 Histidine kinase-like ATPases I876_06850 SM00448 cheY-homologous receiver domain I876_06850 SM00862 Transcriptional regulatory protein, C terminal I876_06920 SM00363 S4 RNA-binding domain I876_06930 SM01266 I876_06930 I876_07000 SM00421 helix_turn_helix, Lux Regulon I876_07000 SM00448 cheY-homologous receiver domain I876_07005 SM00387 Histidine kinase-like ATPases I876_07005 SM00388 His Kinase A (phosphoacceptor) domain I876_07005 SM00448 cheY-homologous receiver domain I876_07020 SM00271 DnaJ molecular chaperone homology domain I876_07030 SM00052 Putative diguanylate phosphodiesterase I876_07030 SM00091 PAS domain I876_07030 SM00267 diguanylate cyclase I876_07050 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain I876_07055 SM00851 MGS-like domain I876_07055 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain I876_07105 SM00116 Domain in cystathionine beta-synthase and other proteins. I876_07105 SM01091 Transporter associated domain I876_07120 SM00729 Elongator protein 3, MiaB family, Radical SAM I876_07170 SM00903 Flavin reductase like domain I876_07210 SM00829 Enoylreductase I876_07225 SM01400 I876_07225 I876_07245 SM00937 I876_07245 I876_07300 SM00838 Elongation factor G C-terminus I876_07300 SM00889 Elongation factor G, domain IV I876_07305 SM01116 I876_07305 I876_07310 SM00219 Tyrosine kinase, catalytic domain I876_07310 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain I876_07320 SM00460 Transglutaminase/protease-like homologues I876_07350 SM00052 Putative diguanylate phosphodiesterase I876_07350 SM00267 diguanylate cyclase I876_07430 SM00347 helix_turn_helix multiple antibiotic resistance protein I876_07445 SM00857 Resolvase, N terminal domain I876_07455 SM00864 Tubulin/FtsZ family, GTPase domain I876_07455 SM00865 Tubulin/FtsZ family, C-terminal domain I876_07475 SM00052 Putative diguanylate phosphodiesterase I876_07475 SM00267 diguanylate cyclase I876_07495 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I876_07510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_07510 SM00091 PAS domain I876_07510 SM00267 diguanylate cyclase I876_07540 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I876_07545 SM01092 CO dehydrogenase flavoprotein C-terminal domain I876_07585 SM00448 cheY-homologous receiver domain I876_07595 SM00267 diguanylate cyclase I876_07600 SM00387 Histidine kinase-like ATPases I876_07600 SM00388 His Kinase A (phosphoacceptor) domain I876_07600 SM00448 cheY-homologous receiver domain I876_07690 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I876_07765 SM00052 Putative diguanylate phosphodiesterase I876_07765 SM00267 diguanylate cyclase I876_07845 SM00873 B3/4 domain I876_07845 SM00874 tRNA synthetase B5 domain I876_07845 SM00896 Ferredoxin-fold anticodon binding domain I876_07850 SM00411 bacterial (prokaryotic) histone like domain I876_07885 SM00487 DEAD-like helicases superfamily I876_07885 SM00490 helicase superfamily c-terminal domain I876_07885 SM00982 I876_07885 I876_07885 SM01058 CarD-like/TRCF domain I876_07905 SM00387 Histidine kinase-like ATPases I876_07910 SM00897 FIST N domain I876_07910 SM01204 I876_07910 I876_07985 SM01321 I876_07985 I876_07995 SM00878 Biotin carboxylase C-terminal domain I876_08015 SM00422 helix_turn_helix, mercury resistance I876_08035 SM00062 Bacterial periplasmic substrate-binding proteins I876_08035 SM00267 diguanylate cyclase I876_08050 SM00387 Histidine kinase-like ATPases I876_08050 SM00388 His Kinase A (phosphoacceptor) domain I876_08050 SM00448 cheY-homologous receiver domain I876_08065 SM00116 Domain in cystathionine beta-synthase and other proteins. I876_08090 SM00267 diguanylate cyclase I876_08095 SM00342 helix_turn_helix, arabinose operon control protein I876_08105 SM00382 ATPases associated with a variety of cellular activities I876_08105 SM00487 DEAD-like helicases superfamily I876_08105 SM00490 helicase superfamily c-terminal domain I876_08105 SM00847 Helicase associated domain (HA2) Add an annotation I876_08120 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I876_08125 SM00829 Enoylreductase I876_08135 SM00479 I876_08135 I876_08145 SM00052 Putative diguanylate phosphodiesterase I876_08150 SM00382 ATPases associated with a variety of cellular activities I876_08165 SM00634 Bacterial Ig-like domain (group 1) I876_08180 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain I876_08180 SM00437 Bacterial DNA topoisomerase I DNA-binding domain I876_08180 SM00493 I876_08180 I876_08230 SM00587 ZnF_C4 abd HLH domain containing kinases domain I876_08235 SM00316 Ribosomal protein S1-like RNA-binding domain I876_08240 SM00363 S4 RNA-binding domain I876_08275 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. I876_08280 SM00822 I876_08280 I876_08290 SM00825 Beta-ketoacyl synthase I876_08330 SM00267 diguanylate cyclase I876_08440 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_08440 SM00091 PAS domain I876_08440 SM00387 Histidine kinase-like ATPases I876_08440 SM00388 His Kinase A (phosphoacceptor) domain I876_08440 SM00448 cheY-homologous receiver domain I876_08445 SM00448 cheY-homologous receiver domain I876_08445 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I876_08455 SM00316 Ribosomal protein S1-like RNA-binding domain I876_08480 SM01387 I876_08480 I876_08485 SM00363 S4 RNA-binding domain I876_08505 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I876_08515 SM00448 cheY-homologous receiver domain I876_08580 SM00729 Elongator protein 3, MiaB family, Radical SAM I876_08620 SM00382 ATPases associated with a variety of cellular activities I876_08645 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_08645 SM00267 diguanylate cyclase I876_08665 SM00857 Resolvase, N terminal domain I876_08715 SM00347 helix_turn_helix multiple antibiotic resistance protein I876_08735 SM00028 Tetratricopeptide repeats I876_08760 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I876_08790 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. I876_08795 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain I876_08825 SM00357 Cold shock protein domain I876_08835 SM00382 ATPases associated with a variety of cellular activities I876_08835 SM01086 C-terminal, D2-small domain, of ClpB protein I876_08840 SM00316 Ribosomal protein S1-like RNA-binding domain I876_08865 SM00731 SprT homologues. I876_08895 SM00870 I876_08895 I876_08900 SM00729 Elongator protein 3, MiaB family, Radical SAM I876_08915 SM00936 Penicillin-binding protein 5, C-terminal domain I876_08985 SM00267 diguanylate cyclase I876_08995 SM01103 I876_08995 I876_09005 SM00382 ATPases associated with a variety of cellular activities I876_09030 SM00052 Putative diguanylate phosphodiesterase I876_09030 SM00267 diguanylate cyclase I876_09030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_09045 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I876_09050 SM00046 Diacylglycerol kinase catalytic domain (presumed) I876_09050 SM00195 Dual specificity phosphatase, catalytic domain I876_09050 SM00404 Protein tyrosine phosphatase, catalytic domain motif I876_09100 SM00507 HNH nucleases I876_09105 SM00316 Ribosomal protein S1-like RNA-binding domain I876_09105 SM00322 K homology RNA-binding domain I876_09375 SM00028 Tetratricopeptide repeats I876_09395 SM00771 ZipA, C-terminal domain (FtsZ-binding) I876_09400 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I876_09400 SM00292 breast cancer carboxy-terminal domain I876_09400 SM00532 Ligase N family I876_09410 SM00849 Metallo-beta-lactamase superfamily I876_09415 SM00382 ATPases associated with a variety of cellular activities I876_09440 SM00729 Elongator protein 3, MiaB family, Radical SAM I876_09505 SM00861 Transketolase, pyrimidine binding domain I876_09520 SM00881 CoA binding domain I876_09565 SM00642 Alpha-amylase domain I876_09570 SM00642 Alpha-amylase domain I876_09580 SM00642 Alpha-amylase domain I876_09585 SM00354 helix_turn _helix lactose operon repressor I876_09705 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I876_09720 SM00387 Histidine kinase-like ATPases I876_09725 SM00448 cheY-homologous receiver domain I876_09725 SM00850 LytTr DNA-binding domain I876_09740 SM00507 HNH nucleases I876_09780 SM00857 Resolvase, N terminal domain I876_09850 SM00671 Sel1-like repeats. I876_09875 SM00450 Rhodanese Homology Domain I876_09875 SM00849 Metallo-beta-lactamase superfamily I876_09925 SM00829 Enoylreductase I876_09930 SM00829 Enoylreductase I876_09935 SM00822 I876_09935 I876_09990 SM00450 Rhodanese Homology Domain I876_09990 SM00849 Metallo-beta-lactamase superfamily I876_10005 SM00028 Tetratricopeptide repeats I876_10005 SM00448 cheY-homologous receiver domain I876_10015 SM00450 Rhodanese Homology Domain I876_10020 SM00054 EF-hand, calcium binding motif I876_10025 SM00487 DEAD-like helicases superfamily I876_10025 SM00490 helicase superfamily c-terminal domain I876_10030 SM00882 Coenzyme A transferase I876_10035 SM00882 Coenzyme A transferase I876_10050 SM00387 Histidine kinase-like ATPases I876_10100 SM00861 Transketolase, pyrimidine binding domain I876_10115 SM00220 Serine/Threonine protein kinases, catalytic domain I876_10150 SM00945 ProQ/FINO family I876_10155 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I876_10155 SM00245 tail specific protease I876_10215 SM00981 I876_10215 I876_10225 SM00382 ATPases associated with a variety of cellular activities I876_10285 SM00052 Putative diguanylate phosphodiesterase I876_10285 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_10285 SM00091 PAS domain I876_10285 SM00267 diguanylate cyclase I876_10290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_10300 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_10300 SM00091 PAS domain I876_10300 SM00267 diguanylate cyclase I876_10305 SM00052 Putative diguanylate phosphodiesterase I876_10305 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_10305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_10305 SM00091 PAS domain I876_10305 SM00267 diguanylate cyclase I876_10335 SM00470 ParB-like nuclease domain I876_10490 SM00100 Cyclic nucleotide-monophosphate binding domain I876_10490 SM00419 helix_turn_helix, cAMP Regulatory protein I876_10515 SM00047 Lysozyme subfamily 2 I876_10535 SM00450 Rhodanese Homology Domain I876_10545 SM01144 I876_10545 I876_10635 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I876_10635 SM00465 GIY-YIG type nucleases (URI domain) I876_10640 SM00421 helix_turn_helix, Lux Regulon I876_10640 SM00448 cheY-homologous receiver domain I876_10745 SM00382 ATPases associated with a variety of cellular activities I876_10755 SM00843 I876_10755 I876_10760 SM00344 helix_turn_helix ASNC type I876_10765 SM01002 Alanine dehydrogenase/PNT, C-terminal domain I876_10765 SM01003 Alanine dehydrogenase/PNT, N-terminal domain I876_10770 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family I876_10775 SM00028 Tetratricopeptide repeats I876_10790 SM00411 bacterial (prokaryotic) histone like domain I876_10795 SM00316 Ribosomal protein S1-like RNA-binding domain I876_10815 SM00434 DNA Topoisomerase IV I876_10855 SM00052 Putative diguanylate phosphodiesterase I876_10855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_10855 SM00267 diguanylate cyclase I876_10875 SM01130 I876_10875 I876_10955 SM00421 helix_turn_helix, Lux Regulon I876_10955 SM00448 cheY-homologous receiver domain I876_10985 SM00642 Alpha-amylase domain I876_10995 SM00852 Probable molybdopterin binding domain I876_11015 SM00382 ATPases associated with a variety of cellular activities I876_11065 SM00530 Helix-turn-helix XRE-family like proteins I876_11140 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. I876_11150 SM00563 Phosphate acyltransferases I876_11200 SM00342 helix_turn_helix, arabinose operon control protein I876_11240 SM00893 Electron transfer flavoprotein domain I876_11245 SM00893 Electron transfer flavoprotein domain I876_11255 SM00528 Domain in histone-like proteins of HNS family I876_11275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_11275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_11290 SM00797 Allophanate hydrolase subunit 2 I876_11295 SM00796 Allophanate hydrolase subunit 1 I876_11350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I876_11395 SM00342 helix_turn_helix, arabinose operon control protein I876_11410 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I876_11445 SM00829 Enoylreductase I876_11460 SM00855 Phosphoglycerate mutase family I876_11485 SM00729 Elongator protein 3, MiaB family, Radical SAM I876_11490 SM00382 ATPases associated with a variety of cellular activities I876_11520 SM00852 Probable molybdopterin binding domain I876_11645 SM00052 Putative diguanylate phosphodiesterase I876_11645 SM00267 diguanylate cyclase I876_11650 SM00849 Metallo-beta-lactamase superfamily I876_11685 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I876_11690 SM00450 Rhodanese Homology Domain I876_11705 SM00382 ATPases associated with a variety of cellular activities I876_11705 SM00448 cheY-homologous receiver domain I876_11715 SM00387 Histidine kinase-like ATPases I876_11715 SM00388 His Kinase A (phosphoacceptor) domain I876_11720 SM00448 cheY-homologous receiver domain I876_11725 SM00387 Histidine kinase-like ATPases I876_11725 SM00388 His Kinase A (phosphoacceptor) domain I876_11725 SM00448 cheY-homologous receiver domain I876_11795 SM00631 I876_11795 I876_11800 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I876_11815 SM01350 I876_11815 I876_11820 SM00642 Alpha-amylase domain I876_11825 SM00642 Alpha-amylase domain I876_11835 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I876_11900 SM00749 bacterial OsmY and nodulation domain I876_11980 SM00354 helix_turn _helix lactose operon repressor I876_11985 SM00858 I876_11985 I876_12025 SM00710 Parallel beta-helix repeats I876_12035 SM00387 Histidine kinase-like ATPases I876_12035 SM00388 His Kinase A (phosphoacceptor) domain I876_12035 SM00448 cheY-homologous receiver domain I876_12055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_12055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_12080 SM00052 Putative diguanylate phosphodiesterase I876_12080 SM00267 diguanylate cyclase I876_12090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I876_12095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_12095 SM00387 Histidine kinase-like ATPases I876_12135 SM00849 Metallo-beta-lactamase superfamily I876_12140 SM00257 Lysin motif I876_12165 SM00840 I876_12165 I876_12180 SM00098 Alkaline phosphatase homologues I876_12185 SM00098 Alkaline phosphatase homologues I876_12200 SM00244 prohibitin homologues I876_12220 SM00642 Alpha-amylase domain I876_12230 SM00829 Enoylreductase I876_12235 SM01060 I876_12235 I876_12240 SM00829 Enoylreductase I876_12325 SM01007 Class II Aldolase and Adducin N-terminal domain I876_12330 SM00100 Cyclic nucleotide-monophosphate binding domain I876_12330 SM00419 helix_turn_helix, cAMP Regulatory protein I876_12345 SM00825 Beta-ketoacyl synthase I876_12395 SM00422 helix_turn_helix, mercury resistance I876_12400 SM00829 Enoylreductase I876_12415 SM00382 ATPases associated with a variety of cellular activities I876_12425 SM00387 Histidine kinase-like ATPases I876_12425 SM00388 His Kinase A (phosphoacceptor) domain I876_12425 SM00448 cheY-homologous receiver domain I876_12540 SM00345 helix_turn_helix gluconate operon transcriptional repressor I876_12585 SM00341 Helicase and RNase D C-terminal I876_12585 SM00474 3'-5' exonuclease I876_12615 SM00487 DEAD-like helicases superfamily I876_12615 SM00488 I876_12615 I876_12615 SM00491 I876_12615 I876_12625 SM00014 Acid phosphatase homologues I876_12640 SM00642 Alpha-amylase domain I876_12755 SM00387 Histidine kinase-like ATPases I876_12760 SM00493 I876_12760 I876_12770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_12770 SM00448 cheY-homologous receiver domain I876_12770 SM00911 HWE histidine kinase I876_12780 SM00382 ATPases associated with a variety of cellular activities I876_12805 SM00862 Transcriptional regulatory protein, C terminal I876_12815 SM00091 PAS domain I876_12815 SM00267 diguanylate cyclase I876_12835 SM00028 Tetratricopeptide repeats I876_12845 SM00382 ATPases associated with a variety of cellular activities I876_12845 SM01086 C-terminal, D2-small domain, of ClpB protein I876_12855 SM00363 S4 RNA-binding domain I876_12925 SM00861 Transketolase, pyrimidine binding domain I876_12980 SM00382 ATPases associated with a variety of cellular activities I876_12990 SM00382 ATPases associated with a variety of cellular activities I876_13025 SM00358 Double-stranded RNA binding motif I876_13025 SM00535 Ribonuclease III family I876_13035 SM00838 Elongation factor G C-terminus I876_13095 SM00938 Nitrogen regulatory protein P-II I876_13180 SM00904 Riboflavin kinase I876_13225 SM00563 Phosphate acyltransferases I876_13245 SM00411 bacterial (prokaryotic) histone like domain I876_13250 SM00382 ATPases associated with a variety of cellular activities I876_13250 SM00464 Found in ATP-dependent protease La (LON) I876_13255 SM00382 ATPases associated with a variety of cellular activities I876_13255 SM00994 ClpX C4-type zinc finger I876_13255 SM01086 C-terminal, D2-small domain, of ClpB protein I876_13305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_13325 SM00116 Domain in cystathionine beta-synthase and other proteins. I876_13325 SM01240 I876_13325 I876_13345 SM00382 ATPases associated with a variety of cellular activities I876_13350 SM00564 beta-propeller repeat I876_13355 SM00028 Tetratricopeptide repeats I876_13375 SM00028 Tetratricopeptide repeats I876_13375 SM00257 Lysin motif I876_13385 SM00562 I876_13385 I876_13415 SM00382 ATPases associated with a variety of cellular activities I876_13460 SM00850 LytTr DNA-binding domain I876_13475 SM01323 I876_13475 I876_13540 SM00382 ATPases associated with a variety of cellular activities I876_13560 SM00098 Alkaline phosphatase homologues I876_13565 SM00260 Two component signalling adaptor domain I876_13565 SM00448 cheY-homologous receiver domain I876_13750 SM00710 Parallel beta-helix repeats I876_13790 SM00382 ATPases associated with a variety of cellular activities I876_13855 SM00052 Putative diguanylate phosphodiesterase I876_13855 SM00267 diguanylate cyclase I876_13870 SM00354 helix_turn _helix lactose operon repressor I876_13920 SM00967 RNA 2'-O ribose methyltransferase substrate binding I876_13965 SM00422 helix_turn_helix, mercury resistance I876_14005 SM00953 I876_14005 I876_14025 SM00448 cheY-homologous receiver domain I876_14025 SM00862 Transcriptional regulatory protein, C terminal I876_14030 SM00387 Histidine kinase-like ATPases I876_14030 SM00388 His Kinase A (phosphoacceptor) domain I876_14075 SM01092 CO dehydrogenase flavoprotein C-terminal domain I876_14080 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I876_14125 SM01322 I876_14125 I876_14170 SM00487 DEAD-like helicases superfamily I876_14170 SM00490 helicase superfamily c-terminal domain I876_14190 SM00028 Tetratricopeptide repeats I876_14190 SM00387 Histidine kinase-like ATPases I876_14190 SM00388 His Kinase A (phosphoacceptor) domain I876_14190 SM00448 cheY-homologous receiver domain I876_14200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_14200 SM00387 Histidine kinase-like ATPases I876_14200 SM00388 His Kinase A (phosphoacceptor) domain I876_14200 SM00448 cheY-homologous receiver domain I876_14230 SM00988 UreE urease accessory protein, N-terminal domain I876_14255 SM00382 ATPases associated with a variety of cellular activities I876_14285 SM00387 Histidine kinase-like ATPases I876_14285 SM00388 His Kinase A (phosphoacceptor) domain I876_14285 SM00448 cheY-homologous receiver domain I876_14290 SM00421 helix_turn_helix, Lux Regulon I876_14290 SM00448 cheY-homologous receiver domain I876_14295 SM00382 ATPases associated with a variety of cellular activities I876_14340 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins I876_14360 SM00382 ATPases associated with a variety of cellular activities I876_14370 SM00696 Repeats found in Drosophila proteins. I876_14410 SM00422 helix_turn_helix, mercury resistance I876_14420 SM00342 helix_turn_helix, arabinose operon control protein I876_14485 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I876_14510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_14510 SM00387 Histidine kinase-like ATPases I876_14510 SM00388 His Kinase A (phosphoacceptor) domain I876_14510 SM00448 cheY-homologous receiver domain I876_14590 SM00345 helix_turn_helix gluconate operon transcriptional repressor I876_14590 SM00895 I876_14590 I876_14600 SM00644 I876_14600 I876_14655 SM00957 SecA DEAD-like domain I876_14655 SM00958 SecA preprotein cross-linking domain I876_14670 SM00864 Tubulin/FtsZ family, GTPase domain I876_14670 SM00865 Tubulin/FtsZ family, C-terminal domain I876_14675 SM00842 Cell division protein FtsA I876_14805 SM00028 Tetratricopeptide repeats I876_14805 SM00267 diguanylate cyclase I876_14815 SM00382 ATPases associated with a variety of cellular activities I876_14815 SM00448 cheY-homologous receiver domain I876_14820 SM00387 Histidine kinase-like ATPases I876_14870 SM00732 Likely ribonuclease with RNase H fold. I876_14880 SM00382 ATPases associated with a variety of cellular activities I876_14960 SM00530 Helix-turn-helix XRE-family like proteins I876_14970 SM00360 RNA recognition motif I876_15000 SM00986 Uracil DNA glycosylase superfamily I876_15000 SM00987 UreE urease accessory protein, C-terminal domain I876_15030 SM00829 Enoylreductase I876_15040 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I876_15045 SM00226 Low molecular weight phosphatase family I876_15060 SM00448 cheY-homologous receiver domain I876_15070 SM00448 cheY-homologous receiver domain I876_15070 SM00862 Transcriptional regulatory protein, C terminal I876_15075 SM00387 Histidine kinase-like ATPases I876_15075 SM00388 His Kinase A (phosphoacceptor) domain I876_15115 SM00342 helix_turn_helix, arabinose operon control protein I876_15170 SM00749 bacterial OsmY and nodulation domain I876_15195 SM00421 helix_turn_helix, Lux Regulon I876_15195 SM00448 cheY-homologous receiver domain I876_15215 SM00345 helix_turn_helix gluconate operon transcriptional repressor I876_15215 SM00895 I876_15215 I876_15240 SM00267 diguanylate cyclase I876_15240 SM00448 cheY-homologous receiver domain I876_15285 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_15285 SM00091 PAS domain I876_15285 SM00387 Histidine kinase-like ATPases I876_15285 SM00388 His Kinase A (phosphoacceptor) domain I876_15285 SM00448 cheY-homologous receiver domain I876_15290 SM00287 Bacterial SH3 domain homologues I876_15290 SM00644 I876_15290 I876_15330 SM00450 Rhodanese Homology Domain I876_15480 SM00448 cheY-homologous receiver domain I876_15495 SM01230 I876_15495 I876_15505 SM00091 PAS domain I876_15505 SM00387 Histidine kinase-like ATPases I876_15505 SM00388 His Kinase A (phosphoacceptor) domain I876_15510 SM00382 ATPases associated with a variety of cellular activities I876_15510 SM00448 cheY-homologous receiver domain I876_15515 SM00073 Histidine Phosphotransfer domain I876_15520 SM00563 Phosphate acyltransferases I876_15535 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_15535 SM00091 PAS domain I876_15535 SM00267 diguanylate cyclase I876_15545 SM00244 prohibitin homologues I876_15555 SM00387 Histidine kinase-like ATPases I876_15555 SM00388 His Kinase A (phosphoacceptor) domain I876_15555 SM00448 cheY-homologous receiver domain I876_15555 SM01358 I876_15555 I876_15645 SM00028 Tetratricopeptide repeats I876_15660 SM00345 helix_turn_helix gluconate operon transcriptional repressor I876_15660 SM00895 I876_15660 I876_15680 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I876_15700 SM00267 diguanylate cyclase I876_15730 SM00387 Histidine kinase-like ATPases I876_15730 SM00448 cheY-homologous receiver domain I876_15740 SM00886 Stress responsive A/B Barrel Domain I876_15750 SM00382 ATPases associated with a variety of cellular activities I876_15815 SM00849 Metallo-beta-lactamase superfamily I876_15815 SM01027 Beta-Casp domain I876_15835 SM00996 S-adenosyl-L-homocysteine hydrolase I876_15835 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain I876_15870 SM00564 beta-propeller repeat I876_15875 SM00062 Bacterial periplasmic substrate-binding proteins I876_15890 SM00382 ATPases associated with a variety of cellular activities I876_15920 SM00729 Elongator protein 3, MiaB family, Radical SAM I876_15945 SM00421 helix_turn_helix, Lux Regulon I876_15945 SM00448 cheY-homologous receiver domain I876_15950 SM00091 PAS domain I876_15950 SM00387 Histidine kinase-like ATPases I876_15950 SM00388 His Kinase A (phosphoacceptor) domain I876_15950 SM00448 cheY-homologous receiver domain I876_15955 SM00897 FIST N domain I876_15955 SM01204 I876_15955 I876_15960 SM00900 I876_15960 I876_15970 SM00421 helix_turn_helix, Lux Regulon I876_15970 SM00448 cheY-homologous receiver domain I876_15980 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_15980 SM00091 PAS domain I876_15980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_16015 SM00965 Secretin and TonB N terminus short domain I876_16040 SM00421 helix_turn_helix, Lux Regulon I876_16070 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins I876_16075 SM00421 helix_turn_helix, Lux Regulon I876_16075 SM00448 cheY-homologous receiver domain I876_16080 SM00387 Histidine kinase-like ATPases I876_16085 SM00822 I876_16085 I876_16100 SM00487 DEAD-like helicases superfamily I876_16100 SM00490 helicase superfamily c-terminal domain I876_16140 SM00710 Parallel beta-helix repeats I876_16145 SM00345 helix_turn_helix gluconate operon transcriptional repressor I876_16145 SM00895 I876_16145 I876_16170 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_16170 SM00091 PAS domain I876_16170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_16175 SM00155 Phospholipase D. Active site motifs. I876_16205 SM00448 cheY-homologous receiver domain I876_16215 SM00387 Histidine kinase-like ATPases I876_16220 SM00849 Metallo-beta-lactamase superfamily I876_16225 SM00486 DNA polymerase type-B family I876_16240 SM00360 RNA recognition motif I876_16275 SM00986 Uracil DNA glycosylase superfamily I876_16275 SM00987 UreE urease accessory protein, C-terminal domain I876_16280 SM00052 Putative diguanylate phosphodiesterase I876_16280 SM00267 diguanylate cyclase I876_16375 SM00173 Ras subfamily of RAS small GTPases I876_16375 SM00175 Rab subfamily of small GTPases I876_16380 SM00052 Putative diguanylate phosphodiesterase I876_16380 SM00267 diguanylate cyclase I876_16390 SM00563 Phosphate acyltransferases I876_16395 SM00563 Phosphate acyltransferases I876_16525 SM00052 Putative diguanylate phosphodiesterase I876_16525 SM00267 diguanylate cyclase I876_16545 SM00849 Metallo-beta-lactamase superfamily I876_16585 SM00530 Helix-turn-helix XRE-family like proteins I876_16605 SM00903 Flavin reductase like domain I876_16640 SM00100 Cyclic nucleotide-monophosphate binding domain I876_16655 SM00849 Metallo-beta-lactamase superfamily I876_16705 SM00900 I876_16705 I876_16790 SM00028 Tetratricopeptide repeats I876_16800 SM00267 diguanylate cyclase I876_16800 SM00448 cheY-homologous receiver domain I876_16805 SM00479 I876_16805 I876_16810 SM00116 Domain in cystathionine beta-synthase and other proteins. I876_16825 SM00387 Histidine kinase-like ATPases I876_16825 SM00388 His Kinase A (phosphoacceptor) domain I876_16825 SM00448 cheY-homologous receiver domain I876_16855 SM00421 helix_turn_helix, Lux Regulon I876_16855 SM00448 cheY-homologous receiver domain I876_16895 SM00052 Putative diguanylate phosphodiesterase I876_16895 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_16895 SM00091 PAS domain I876_16895 SM00267 diguanylate cyclase I876_16970 SM00984 UDP binding domain I876_17070 SM00028 Tetratricopeptide repeats I876_17205 SM00662 RNA polymerases D I876_17210 SM00363 S4 RNA-binding domain I876_17210 SM01390 I876_17210 I876_17275 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I876_17280 SM01374 I876_17280 I876_17285 SM00387 Histidine kinase-like ATPases I876_17285 SM00388 His Kinase A (phosphoacceptor) domain I876_17285 SM00448 cheY-homologous receiver domain I876_17305 SM00967 RNA 2'-O ribose methyltransferase substrate binding I876_17310 SM00316 Ribosomal protein S1-like RNA-binding domain I876_17310 SM00357 Cold shock protein domain I876_17310 SM00955 I876_17310 I876_17355 SM00671 Sel1-like repeats. I876_17395 SM00387 Histidine kinase-like ATPases I876_17395 SM00388 His Kinase A (phosphoacceptor) domain I876_17395 SM00448 cheY-homologous receiver domain I876_17420 SM00344 helix_turn_helix ASNC type I876_17430 SM00357 Cold shock protein domain I876_17460 SM00448 cheY-homologous receiver domain I876_17470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_17470 SM00387 Histidine kinase-like ATPases I876_17470 SM00388 His Kinase A (phosphoacceptor) domain I876_17475 SM00448 cheY-homologous receiver domain I876_17485 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I876_17545 SM00382 ATPases associated with a variety of cellular activities I876_17550 SM00421 helix_turn_helix, Lux Regulon I876_17575 SM00382 ATPases associated with a variety of cellular activities I876_17575 SM01086 C-terminal, D2-small domain, of ClpB protein I876_17590 SM00487 DEAD-like helicases superfamily I876_17590 SM00490 helicase superfamily c-terminal domain I876_17605 SM00919 Malic enzyme, NAD binding domain I876_17605 SM01274 I876_17605 I876_17655 SM00052 Putative diguanylate phosphodiesterase I876_17670 SM00382 ATPases associated with a variety of cellular activities I876_17675 SM00382 ATPases associated with a variety of cellular activities I876_17675 SM00962 SRP54-type protein, GTPase domain I876_17675 SM00963 SRP54-type protein, helical bundle domain I876_17745 SM00052 Putative diguanylate phosphodiesterase I876_17760 SM00382 ATPases associated with a variety of cellular activities I876_17765 SM00448 cheY-homologous receiver domain I876_17765 SM00862 Transcriptional regulatory protein, C terminal I876_17770 SM00387 Histidine kinase-like ATPases I876_17770 SM00388 His Kinase A (phosphoacceptor) domain I876_17780 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I876_17795 SM00116 Domain in cystathionine beta-synthase and other proteins. I876_17835 SM00838 Elongation factor G C-terminus I876_17835 SM00889 Elongation factor G, domain IV I876_17850 SM00663 RNA polymerase I subunit A N-terminus I876_17875 SM00649 Ribosomal protein L11/L12 I876_17895 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. I876_17895 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I876_17905 SM00382 ATPases associated with a variety of cellular activities I876_17925 SM00487 DEAD-like helicases superfamily I876_17925 SM00490 helicase superfamily c-terminal domain I876_17960 SM00642 Alpha-amylase domain I876_17995 SM00487 DEAD-like helicases superfamily I876_17995 SM00490 helicase superfamily c-terminal domain I876_18000 SM00849 Metallo-beta-lactamase superfamily I876_18010 SM00841 Elongation factor P, C-terminal I876_18010 SM01185 I876_18010 I876_18085 SM00244 prohibitin homologues I876_18090 SM00244 prohibitin homologues I876_18110 SM01340 I876_18110 I876_18115 SM00257 Lysin motif I876_18115 SM00646 I876_18115 I876_18175 SM00382 ATPases associated with a variety of cellular activities I876_18210 SM00849 Metallo-beta-lactamase superfamily I876_18230 SM00387 Histidine kinase-like ATPases I876_18230 SM00388 His Kinase A (phosphoacceptor) domain I876_18240 SM00382 ATPases associated with a variety of cellular activities I876_18250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_18255 SM00387 Histidine kinase-like ATPases I876_18260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I876_18305 SM00354 helix_turn _helix lactose operon repressor I876_18315 SM00382 ATPases associated with a variety of cellular activities I876_18320 SM00382 ATPases associated with a variety of cellular activities I876_18345 SM00382 ATPases associated with a variety of cellular activities I876_18380 SM00267 diguanylate cyclase I876_18430 SM00116 Domain in cystathionine beta-synthase and other proteins. I876_18445 SM00867 YceI-like domain I876_18475 SM00829 Enoylreductase I876_18480 SM00267 diguanylate cyclase I876_18485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_18485 SM00387 Histidine kinase-like ATPases I876_18485 SM00388 His Kinase A (phosphoacceptor) domain I876_18485 SM00448 cheY-homologous receiver domain I876_18510 SM00420 helix_turn_helix, Deoxyribose operon repressor I876_18510 SM01134 I876_18510 I876_18525 SM00267 diguanylate cyclase I876_18540 SM00342 helix_turn_helix, arabinose operon control protein I876_18540 SM01009 AlkA N-terminal domain I876_18570 SM01002 Alanine dehydrogenase/PNT, C-terminal domain I876_18570 SM01003 Alanine dehydrogenase/PNT, N-terminal domain I876_18595 SM00965 Secretin and TonB N terminus short domain I876_18655 SM00670 Large family of predicted nucleotide-binding domains I876_18680 SM00883 Chaperonin 10 Kd subunit I876_18715 SM00878 Biotin carboxylase C-terminal domain I876_18735 SM00479 I876_18735 I876_18735 SM00990 I876_18735 I876_18765 SM00062 Bacterial periplasmic substrate-binding proteins I876_18785 SM00798 AICARFT/IMPCHase bienzyme I876_18785 SM00851 MGS-like domain I876_18795 SM01209 I876_18795 I876_18795 SM01210 I876_18795 I876_18800 SM00047 Lysozyme subfamily 2 I876_18825 SM00448 cheY-homologous receiver domain I876_18825 SM00862 Transcriptional regulatory protein, C terminal I876_18835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I876_18835 SM00387 Histidine kinase-like ATPases I876_18835 SM00388 His Kinase A (phosphoacceptor) domain I876_18860 SM00363 S4 RNA-binding domain I876_18875 SM00382 ATPases associated with a variety of cellular activities I876_18955 SM00867 YceI-like domain I876_18990 SM00382 ATPases associated with a variety of cellular activities I876_19015 SM00320 WD40 repeats I876_19035 SM00316 Ribosomal protein S1-like RNA-binding domain I876_19035 SM00732 Likely ribonuclease with RNase H fold. I876_19065 SM00631 I876_19065 I876_19160 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I876_19160 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I876_19160 SM00091 PAS domain I876_19160 SM00267 diguanylate cyclase I876_19165 SM00563 Phosphate acyltransferases I876_19185 SM00382 ATPases associated with a variety of cellular activities I876_19250 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I876_19350 SM00530 Helix-turn-helix XRE-family like proteins I876_19360 SM00530 Helix-turn-helix XRE-family like proteins I876_19365 SM00487 DEAD-like helicases superfamily I876_19405 SM00487 DEAD-like helicases superfamily I876_19460 SM00354 helix_turn _helix lactose operon repressor I876_19475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I876_19485 SM01144 I876_19485 I876_19510 SM00382 ATPases associated with a variety of cellular activities I876_19550 SM00470 ParB-like nuclease domain I876_19565 SM01228 I876_19565 I876_19600 SM01234 I876_19600