I634_00005 SM00382 ATPases associated with a variety of cellular activities I634_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain I634_00010 SM00480 DNA polymerase III beta subunit I634_00020 SM00387 Histidine kinase-like ATPases I634_00020 SM00433 TopoisomeraseII I634_00030 SM00836 DALR anticodon binding domain I634_00070 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs I634_00070 SM00474 3'-5' exonuclease I634_00070 SM00475 5'-3' exonuclease I634_00070 SM00482 DNA polymerase A domain I634_00105 SM00257 Lysin motif I634_00175 SM00481 DNA polymerase alpha chain like domain I634_00265 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain I634_00265 SM01232 I634_00265 I634_00295 SM00052 Putative diguanylate phosphodiesterase I634_00295 SM00267 diguanylate cyclase I634_00305 SM00829 Enoylreductase I634_00310 SM00450 Rhodanese Homology Domain I634_00340 SM00530 Helix-turn-helix XRE-family like proteins I634_00355 SM00052 Putative diguanylate phosphodiesterase I634_00355 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_00355 SM00267 diguanylate cyclase I634_00370 SM00530 Helix-turn-helix XRE-family like proteins I634_00405 SM00849 Metallo-beta-lactamase superfamily I634_00435 SM00382 ATPases associated with a variety of cellular activities I634_00440 SM00382 ATPases associated with a variety of cellular activities I634_00460 SM00450 Rhodanese Homology Domain I634_00465 SM00849 Metallo-beta-lactamase superfamily I634_00485 SM00421 helix_turn_helix, Lux Regulon I634_00530 SM00487 DEAD-like helicases superfamily I634_00530 SM00490 helicase superfamily c-terminal domain I634_00545 SM00382 ATPases associated with a variety of cellular activities I634_00575 SM00849 Metallo-beta-lactamase superfamily I634_00600 SM00876 Biotin and Thiamin Synthesis associated domain I634_00650 SM00267 diguanylate cyclase I634_00665 SM00072 Guanylate kinase homologues. I634_00670 SM01409 I634_00670 I634_00675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I634_00675 SM00954 Region found in RelA / SpoT proteins I634_00690 SM00487 DEAD-like helicases superfamily I634_00690 SM00490 helicase superfamily c-terminal domain I634_00720 SM00382 ATPases associated with a variety of cellular activities I634_00815 SM00422 helix_turn_helix, mercury resistance I634_00825 SM00342 helix_turn_helix, arabinose operon control protein I634_00870 SM00422 helix_turn_helix, mercury resistance I634_00895 SM00052 Putative diguanylate phosphodiesterase I634_00895 SM01034 Sensors of blue-light using FAD I634_00920 SM00271 DnaJ molecular chaperone homology domain I634_00960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_00980 SM00052 Putative diguanylate phosphodiesterase I634_00980 SM00267 diguanylate cyclase I634_00995 SM00341 Helicase and RNase D C-terminal I634_00995 SM00487 DEAD-like helicases superfamily I634_00995 SM00490 helicase superfamily c-terminal domain I634_00995 SM00956 I634_00995 I634_01000 SM00924 MgtE intracellular N domain I634_01010 SM00267 diguanylate cyclase I634_01010 SM00448 cheY-homologous receiver domain I634_01020 SM00971 Serine acetyltransferase, N-terminal I634_01060 SM00014 Acid phosphatase homologues I634_01105 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I634_01155 SM00354 helix_turn _helix lactose operon repressor I634_01220 SM00420 helix_turn_helix, Deoxyribose operon repressor I634_01220 SM01134 I634_01220 I634_01260 SM00965 Secretin and TonB N terminus short domain I634_01270 SM00028 Tetratricopeptide repeats I634_01275 SM00382 ATPases associated with a variety of cellular activities I634_01345 SM00316 Ribosomal protein S1-like RNA-binding domain I634_01375 SM00342 helix_turn_helix, arabinose operon control protein I634_01380 SM01038 Beta galactosidase small chain I634_01385 SM00448 cheY-homologous receiver domain I634_01385 SM00862 Transcriptional regulatory protein, C terminal I634_01390 SM00387 Histidine kinase-like ATPases I634_01415 SM00478 endonuclease III I634_01415 SM00525 I634_01415 I634_01460 SM00382 ATPases associated with a variety of cellular activities I634_01480 SM00923 MbtH-like protein I634_01485 SM00823 Phosphopantetheine attachment site I634_01515 SM00822 I634_01515 I634_01515 SM00825 Beta-ketoacyl synthase I634_01520 SM00823 Phosphopantetheine attachment site I634_01545 SM00823 Phosphopantetheine attachment site I634_01590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_01590 SM00387 Histidine kinase-like ATPases I634_01590 SM00388 His Kinase A (phosphoacceptor) domain I634_01595 SM00448 cheY-homologous receiver domain I634_01595 SM00862 Transcriptional regulatory protein, C terminal I634_01775 SM00422 helix_turn_helix, mercury resistance I634_01940 SM00448 cheY-homologous receiver domain I634_01950 SM00138 Methyltransferase, chemotaxis proteins I634_01955 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_01955 SM00091 PAS domain I634_01955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_01955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_01960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_01960 SM00091 PAS domain I634_01960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_01960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_01965 SM00260 Two component signalling adaptor domain I634_01970 SM00073 Histidine Phosphotransfer domain I634_01970 SM00260 Two component signalling adaptor domain I634_01970 SM00387 Histidine kinase-like ATPases I634_01970 SM01231 I634_01970 I634_01975 SM00448 cheY-homologous receiver domain I634_01980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_01985 SM00448 cheY-homologous receiver domain I634_01995 SM00138 Methyltransferase, chemotaxis proteins I634_02000 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_02000 SM00091 PAS domain I634_02000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_02005 SM00260 Two component signalling adaptor domain I634_02010 SM00073 Histidine Phosphotransfer domain I634_02010 SM00260 Two component signalling adaptor domain I634_02010 SM00387 Histidine kinase-like ATPases I634_02010 SM01231 I634_02010 I634_02015 SM00448 cheY-homologous receiver domain I634_02020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_02055 SM00448 cheY-homologous receiver domain I634_02055 SM00862 Transcriptional regulatory protein, C terminal I634_02060 SM00387 Histidine kinase-like ATPases I634_02110 SM00267 diguanylate cyclase I634_02130 SM00342 helix_turn_helix, arabinose operon control protein I634_02130 SM00387 Histidine kinase-like ATPases I634_02130 SM00388 His Kinase A (phosphoacceptor) domain I634_02130 SM00448 cheY-homologous receiver domain I634_02145 SM00354 helix_turn _helix lactose operon repressor I634_02195 SM00855 Phosphoglycerate mutase family I634_02210 SM00671 Sel1-like repeats. I634_02215 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_02215 SM00382 ATPases associated with a variety of cellular activities I634_02220 SM01403 I634_02220 I634_02240 SM01382 I634_02240 I634_02240 SM01383 I634_02240 I634_02255 SM00322 K homology RNA-binding domain I634_02305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_02305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_02330 SM00487 DEAD-like helicases superfamily I634_02330 SM00490 helicase superfamily c-terminal domain I634_02360 SM00342 helix_turn_helix, arabinose operon control protein I634_02370 SM00938 Nitrogen regulatory protein P-II I634_02390 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain I634_02425 SM00073 Histidine Phosphotransfer domain I634_02425 SM00387 Histidine kinase-like ATPases I634_02425 SM00388 His Kinase A (phosphoacceptor) domain I634_02425 SM00448 cheY-homologous receiver domain I634_02430 SM00434 DNA Topoisomerase IV I634_02450 SM01150 I634_02450 I634_02525 SM00965 Secretin and TonB N terminus short domain I634_02545 SM00842 Cell division protein FtsA I634_02555 SM00919 Malic enzyme, NAD binding domain I634_02555 SM01274 I634_02555 I634_02580 SM01060 I634_02580 I634_02595 SM00052 Putative diguanylate phosphodiesterase I634_02625 SM00859 Semialdehyde dehydrogenase, NAD binding domain I634_02630 SM00851 MGS-like domain I634_02640 SM00448 cheY-homologous receiver domain I634_02640 SM00862 Transcriptional regulatory protein, C terminal I634_02645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_02645 SM00387 Histidine kinase-like ATPases I634_02645 SM00388 His Kinase A (phosphoacceptor) domain I634_02680 SM00450 Rhodanese Homology Domain I634_02720 SM00479 I634_02720 I634_02780 SM00267 diguanylate cyclase I634_02785 SM01004 Delta-aminolevulinic acid dehydratase I634_02795 SM00487 DEAD-like helicases superfamily I634_02795 SM00490 helicase superfamily c-terminal domain I634_02805 SM00357 Cold shock protein domain I634_02805 SM00382 ATPases associated with a variety of cellular activities I634_02805 SM00959 Rho termination factor, N-terminal domain I634_02815 SM00387 Histidine kinase-like ATPases I634_02815 SM00388 His Kinase A (phosphoacceptor) domain I634_02815 SM00448 cheY-homologous receiver domain I634_02825 SM01001 AIR carboxylase I634_02845 SM00052 Putative diguanylate phosphodiesterase I634_02845 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_02845 SM00091 PAS domain I634_02845 SM00267 diguanylate cyclase I634_02900 SM00788 Adenylosuccinate synthetase I634_02950 SM01005 Alanine racemase, C-terminal domain I634_02975 SM00062 Bacterial periplasmic substrate-binding proteins I634_03005 SM00670 Large family of predicted nucleotide-binding domains I634_03020 SM00530 Helix-turn-helix XRE-family like proteins I634_03070 SM00849 Metallo-beta-lactamase superfamily I634_03190 SM00257 Lysin motif I634_03230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_03230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_03230 SM01049 I634_03230 I634_03250 SM00287 Bacterial SH3 domain homologues I634_03255 SM01118 I634_03255 I634_03265 SM00927 DNA mismatch repair enzyme MutH I634_03275 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_03295 SM00448 cheY-homologous receiver domain I634_03300 SM00267 diguanylate cyclase I634_03325 SM00487 DEAD-like helicases superfamily I634_03325 SM00490 helicase superfamily c-terminal domain I634_03340 SM00670 Large family of predicted nucleotide-binding domains I634_03355 SM00487 DEAD-like helicases superfamily I634_03355 SM00490 helicase superfamily c-terminal domain I634_03360 SM00028 Tetratricopeptide repeats I634_03400 SM00387 Histidine kinase-like ATPases I634_03400 SM00433 TopoisomeraseII I634_03440 SM00841 Elongation factor P, C-terminal I634_03440 SM01185 I634_03440 I634_03495 SM00014 Acid phosphatase homologues I634_03505 SM01012 I634_03505 I634_03535 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I634_03550 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_03550 SM00091 PAS domain I634_03550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_03565 SM00382 ATPases associated with a variety of cellular activities I634_03625 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I634_03630 SM01007 Class II Aldolase and Adducin N-terminal domain I634_03660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_03660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_03670 SM00400 zinc finger I634_03670 SM00493 I634_03670 I634_03670 SM00766 DNA primase DnaG DnaB-binding I634_03690 SM00116 Domain in cystathionine beta-synthase and other proteins. I634_03745 SM01207 I634_03745 I634_03750 SM00905 Dihydroneopterin aldolase I634_03785 SM00530 Helix-turn-helix XRE-family like proteins I634_03795 SM00387 Histidine kinase-like ATPases I634_03800 SM00448 cheY-homologous receiver domain I634_03800 SM00862 Transcriptional regulatory protein, C terminal I634_03805 SM00387 Histidine kinase-like ATPases I634_03805 SM00388 His Kinase A (phosphoacceptor) domain I634_03855 SM00028 Tetratricopeptide repeats I634_03860 SM00448 cheY-homologous receiver domain I634_03860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I634_03865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_03865 SM00091 PAS domain I634_03865 SM00387 Histidine kinase-like ATPases I634_03865 SM00388 His Kinase A (phosphoacceptor) domain I634_03865 SM00448 cheY-homologous receiver domain I634_03890 SM00479 I634_03890 I634_03925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_03925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_03940 SM00650 Ribosomal RNA adenine dimethylases I634_03960 SM00271 DnaJ molecular chaperone homology domain I634_04010 SM00954 Region found in RelA / SpoT proteins I634_04040 SM00822 I634_04040 I634_04045 SM01236 I634_04045 I634_04090 SM00387 Histidine kinase-like ATPases I634_04090 SM00388 His Kinase A (phosphoacceptor) domain I634_04095 SM00448 cheY-homologous receiver domain I634_04095 SM00862 Transcriptional regulatory protein, C terminal I634_04140 SM00116 Domain in cystathionine beta-synthase and other proteins. I634_04140 SM00924 MgtE intracellular N domain I634_04170 SM00382 ATPases associated with a variety of cellular activities I634_04200 SM00382 ATPases associated with a variety of cellular activities I634_04235 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I634_04240 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I634_04300 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_04300 SM00091 PAS domain I634_04300 SM00387 Histidine kinase-like ATPases I634_04300 SM00388 His Kinase A (phosphoacceptor) domain I634_04300 SM00448 cheY-homologous receiver domain I634_04325 SM00861 Transketolase, pyrimidine binding domain I634_04330 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I634_04400 SM00382 ATPases associated with a variety of cellular activities I634_04435 SM00347 helix_turn_helix multiple antibiotic resistance protein I634_04445 SM01263 I634_04445 I634_04495 SM00345 helix_turn_helix gluconate operon transcriptional repressor I634_04495 SM00866 I634_04495 I634_04535 SM00382 ATPases associated with a variety of cellular activities I634_04630 SM00850 LytTr DNA-binding domain I634_04645 SM00448 cheY-homologous receiver domain I634_04650 SM00091 PAS domain I634_04670 SM00729 Elongator protein 3, MiaB family, Radical SAM I634_04680 SM00487 DEAD-like helicases superfamily I634_04680 SM00490 helicase superfamily c-terminal domain I634_04690 SM00382 ATPases associated with a variety of cellular activities I634_04700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I634_04715 SM01329 I634_04715 I634_04720 SM00917 LeuA allosteric (dimerisation) domain I634_04730 SM01192 I634_04730 I634_04730 SM01193 I634_04730 I634_04740 SM00533 DNA-binding domain of DNA mismatch repair MUTS family I634_04740 SM00534 ATPase domain of DNA mismatch repair MUTS family I634_04750 SM00382 ATPases associated with a variety of cellular activities I634_04755 SM00382 ATPases associated with a variety of cellular activities I634_04775 SM00382 ATPases associated with a variety of cellular activities I634_04845 SM00382 ATPases associated with a variety of cellular activities I634_04885 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I634_04890 SM01329 I634_04890 I634_04910 SM00267 diguanylate cyclase I634_04970 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I634_05015 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I634_05025 SM00935 Outer membrane protein (OmpH-like) I634_05050 SM00481 DNA polymerase alpha chain like domain I634_05060 SM00977 TilS substrate C-terminal domain I634_05065 SM00267 diguanylate cyclase I634_05090 SM00062 Bacterial periplasmic substrate-binding proteins I634_05095 SM01211 I634_05095 I634_05155 SM00382 ATPases associated with a variety of cellular activities I634_05165 SM00421 helix_turn_helix, Lux Regulon I634_05200 SM00858 I634_05200 I634_05205 SM00260 Two component signalling adaptor domain I634_05205 SM00448 cheY-homologous receiver domain I634_05210 SM00138 Methyltransferase, chemotaxis proteins I634_05255 SM00047 Lysozyme subfamily 2 I634_05325 SM00858 I634_05325 I634_05355 SM00382 ATPases associated with a variety of cellular activities I634_05360 SM00387 Histidine kinase-like ATPases I634_05360 SM00388 His Kinase A (phosphoacceptor) domain I634_05365 SM00382 ATPases associated with a variety of cellular activities I634_05365 SM00448 cheY-homologous receiver domain I634_05390 SM00382 ATPases associated with a variety of cellular activities I634_05450 SM00382 ATPases associated with a variety of cellular activities I634_05450 SM00962 SRP54-type protein, GTPase domain I634_05465 SM00448 cheY-homologous receiver domain I634_05475 SM00073 Histidine Phosphotransfer domain I634_05475 SM00260 Two component signalling adaptor domain I634_05475 SM00387 Histidine kinase-like ATPases I634_05475 SM01231 I634_05475 I634_05480 SM00448 cheY-homologous receiver domain I634_05490 SM00260 Two component signalling adaptor domain I634_05495 SM00260 Two component signalling adaptor domain I634_05515 SM01018 B12 binding domain I634_05540 SM00947 Carbonic anhydrase I634_05575 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I634_05605 SM00382 ATPases associated with a variety of cellular activities I634_05610 SM00382 ATPases associated with a variety of cellular activities I634_05630 SM00382 ATPases associated with a variety of cellular activities I634_05655 SM00091 PAS domain I634_05655 SM00382 ATPases associated with a variety of cellular activities I634_05670 SM00344 helix_turn_helix ASNC type I634_05675 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I634_05700 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I634_05715 SM00028 Tetratricopeptide repeats I634_05725 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I634_05755 SM00028 Tetratricopeptide repeats I634_05795 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. I634_05795 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I634_05845 SM00347 helix_turn_helix multiple antibiotic resistance protein I634_05870 SM00836 DALR anticodon binding domain I634_05870 SM01016 Arginyl tRNA synthetase N terminal dom I634_05900 SM00267 diguanylate cyclase I634_05935 SM00937 I634_05935 I634_05990 SM00463 Small MutS-related domain I634_06020 SM00763 PrkA AAA domain I634_06050 SM00965 Secretin and TonB N terminus short domain I634_06065 SM00479 I634_06065 I634_06085 SM00357 Cold shock protein domain I634_06100 SM00478 endonuclease III I634_06110 SM00900 I634_06110 I634_06140 SM00487 DEAD-like helicases superfamily I634_06140 SM00490 helicase superfamily c-terminal domain I634_06220 SM00267 diguanylate cyclase I634_06245 SM00028 Tetratricopeptide repeats I634_06250 SM00327 von Willebrand factor (vWF) type A domain I634_06290 SM00052 Putative diguanylate phosphodiesterase I634_06290 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_06290 SM00267 diguanylate cyclase I634_06330 SM00345 helix_turn_helix gluconate operon transcriptional repressor I634_06330 SM00866 I634_06330 I634_06355 SM00345 helix_turn_helix gluconate operon transcriptional repressor I634_06355 SM00866 I634_06355 I634_06385 SM00855 Phosphoglycerate mutase family I634_06395 SM01091 Transporter associated domain I634_06405 SM00382 ATPases associated with a variety of cellular activities I634_06405 SM00962 SRP54-type protein, GTPase domain I634_06405 SM00963 SRP54-type protein, helical bundle domain I634_06460 SM00382 ATPases associated with a variety of cellular activities I634_06510 SM00830 Chorismate mutase type II I634_06515 SM00830 Chorismate mutase type II I634_06520 SM00448 cheY-homologous receiver domain I634_06535 SM00331 Sigma factor PP2C-like phosphatases I634_06535 SM00448 cheY-homologous receiver domain I634_06545 SM00052 Putative diguanylate phosphodiesterase I634_06545 SM00267 diguanylate cyclase I634_06555 SM00387 Histidine kinase-like ATPases I634_06555 SM00388 His Kinase A (phosphoacceptor) domain I634_06565 SM00382 ATPases associated with a variety of cellular activities I634_06565 SM00448 cheY-homologous receiver domain I634_06575 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_06600 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I634_06605 SM00382 ATPases associated with a variety of cellular activities I634_06670 SM00859 Semialdehyde dehydrogenase, NAD binding domain I634_06685 SM00267 diguanylate cyclase I634_06715 SM00116 Domain in cystathionine beta-synthase and other proteins. I634_06755 SM00267 diguanylate cyclase I634_06825 SM00729 Elongator protein 3, MiaB family, Radical SAM I634_06825 SM00876 Biotin and Thiamin Synthesis associated domain I634_06850 SM00226 Low molecular weight phosphatase family I634_06860 SM00382 ATPases associated with a variety of cellular activities I634_06880 SM00382 ATPases associated with a variety of cellular activities I634_06885 SM00729 Elongator protein 3, MiaB family, Radical SAM I634_06895 SM00028 Tetratricopeptide repeats I634_06895 SM00448 cheY-homologous receiver domain I634_06925 SM01321 I634_06925 I634_06940 SM00382 ATPases associated with a variety of cellular activities I634_06955 SM00905 Dihydroneopterin aldolase I634_06965 SM00387 Histidine kinase-like ATPases I634_06970 SM00448 cheY-homologous receiver domain I634_06970 SM00862 Transcriptional regulatory protein, C terminal I634_07040 SM00363 S4 RNA-binding domain I634_07050 SM01266 I634_07050 I634_07120 SM00421 helix_turn_helix, Lux Regulon I634_07120 SM00448 cheY-homologous receiver domain I634_07125 SM00387 Histidine kinase-like ATPases I634_07125 SM00388 His Kinase A (phosphoacceptor) domain I634_07125 SM00448 cheY-homologous receiver domain I634_07140 SM00271 DnaJ molecular chaperone homology domain I634_07150 SM00052 Putative diguanylate phosphodiesterase I634_07150 SM00091 PAS domain I634_07150 SM00267 diguanylate cyclase I634_07170 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain I634_07175 SM00851 MGS-like domain I634_07175 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain I634_07225 SM00116 Domain in cystathionine beta-synthase and other proteins. I634_07225 SM01091 Transporter associated domain I634_07240 SM00729 Elongator protein 3, MiaB family, Radical SAM I634_07290 SM00903 Flavin reductase like domain I634_07325 SM00829 Enoylreductase I634_07340 SM01400 I634_07340 I634_07360 SM00937 I634_07360 I634_07425 SM01116 I634_07425 I634_07430 SM00219 Tyrosine kinase, catalytic domain I634_07430 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain I634_07440 SM00460 Transglutaminase/protease-like homologues I634_07470 SM00052 Putative diguanylate phosphodiesterase I634_07470 SM00267 diguanylate cyclase I634_07550 SM00347 helix_turn_helix multiple antibiotic resistance protein I634_07565 SM00857 Resolvase, N terminal domain I634_07575 SM00864 Tubulin/FtsZ family, GTPase domain I634_07575 SM00865 Tubulin/FtsZ family, C-terminal domain I634_07595 SM00052 Putative diguanylate phosphodiesterase I634_07595 SM00267 diguanylate cyclase I634_07615 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I634_07630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_07630 SM00091 PAS domain I634_07630 SM00267 diguanylate cyclase I634_07660 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I634_07665 SM01092 CO dehydrogenase flavoprotein C-terminal domain I634_07705 SM00448 cheY-homologous receiver domain I634_07715 SM00267 diguanylate cyclase I634_07720 SM00387 Histidine kinase-like ATPases I634_07720 SM00388 His Kinase A (phosphoacceptor) domain I634_07720 SM00448 cheY-homologous receiver domain I634_07810 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I634_07880 SM00052 Putative diguanylate phosphodiesterase I634_07880 SM00267 diguanylate cyclase I634_07955 SM00873 B3/4 domain I634_07955 SM00874 tRNA synthetase B5 domain I634_07955 SM00896 Ferredoxin-fold anticodon binding domain I634_07960 SM00411 bacterial (prokaryotic) histone like domain I634_07995 SM00487 DEAD-like helicases superfamily I634_07995 SM00490 helicase superfamily c-terminal domain I634_07995 SM00982 I634_07995 I634_07995 SM01058 CarD-like/TRCF domain I634_08015 SM00387 Histidine kinase-like ATPases I634_08020 SM00897 FIST N domain I634_08020 SM01204 I634_08020 I634_08095 SM01321 I634_08095 I634_08105 SM00878 Biotin carboxylase C-terminal domain I634_08125 SM00422 helix_turn_helix, mercury resistance I634_08145 SM00062 Bacterial periplasmic substrate-binding proteins I634_08145 SM00267 diguanylate cyclase I634_08160 SM00387 Histidine kinase-like ATPases I634_08160 SM00388 His Kinase A (phosphoacceptor) domain I634_08160 SM00448 cheY-homologous receiver domain I634_08170 SM00116 Domain in cystathionine beta-synthase and other proteins. I634_08195 SM00267 diguanylate cyclase I634_08200 SM00342 helix_turn_helix, arabinose operon control protein I634_08210 SM00382 ATPases associated with a variety of cellular activities I634_08210 SM00487 DEAD-like helicases superfamily I634_08210 SM00490 helicase superfamily c-terminal domain I634_08210 SM00847 Helicase associated domain (HA2) Add an annotation I634_08225 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I634_08230 SM00829 Enoylreductase I634_08240 SM00479 I634_08240 I634_08250 SM00052 Putative diguanylate phosphodiesterase I634_08255 SM00382 ATPases associated with a variety of cellular activities I634_08270 SM00634 Bacterial Ig-like domain (group 1) I634_08285 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain I634_08285 SM00437 Bacterial DNA topoisomerase I DNA-binding domain I634_08285 SM00493 I634_08285 I634_08335 SM00587 ZnF_C4 abd HLH domain containing kinases domain I634_08340 SM00316 Ribosomal protein S1-like RNA-binding domain I634_08345 SM00363 S4 RNA-binding domain I634_08380 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. I634_08385 SM00822 I634_08385 I634_08395 SM00825 Beta-ketoacyl synthase I634_08435 SM00267 diguanylate cyclase I634_08545 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_08545 SM00091 PAS domain I634_08545 SM00387 Histidine kinase-like ATPases I634_08545 SM00388 His Kinase A (phosphoacceptor) domain I634_08545 SM00448 cheY-homologous receiver domain I634_08550 SM00448 cheY-homologous receiver domain I634_08550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I634_08560 SM00316 Ribosomal protein S1-like RNA-binding domain I634_08585 SM01387 I634_08585 I634_08590 SM00363 S4 RNA-binding domain I634_08610 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I634_08620 SM00448 cheY-homologous receiver domain I634_08685 SM00729 Elongator protein 3, MiaB family, Radical SAM I634_08725 SM00382 ATPases associated with a variety of cellular activities I634_08750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_08750 SM00267 diguanylate cyclase I634_08770 SM00857 Resolvase, N terminal domain I634_08800 SM00347 helix_turn_helix multiple antibiotic resistance protein I634_08815 SM00028 Tetratricopeptide repeats I634_08840 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I634_08870 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. I634_08875 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain I634_08905 SM00357 Cold shock protein domain I634_08915 SM00382 ATPases associated with a variety of cellular activities I634_08915 SM01086 C-terminal, D2-small domain, of ClpB protein I634_08920 SM00316 Ribosomal protein S1-like RNA-binding domain I634_08945 SM00731 SprT homologues. I634_08975 SM00870 I634_08975 I634_08980 SM00729 Elongator protein 3, MiaB family, Radical SAM I634_08995 SM00936 Penicillin-binding protein 5, C-terminal domain I634_09065 SM00267 diguanylate cyclase I634_09075 SM01103 I634_09075 I634_09085 SM00382 ATPases associated with a variety of cellular activities I634_09110 SM00052 Putative diguanylate phosphodiesterase I634_09110 SM00267 diguanylate cyclase I634_09110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_09125 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I634_09130 SM00046 Diacylglycerol kinase catalytic domain (presumed) I634_09130 SM00195 Dual specificity phosphatase, catalytic domain I634_09130 SM00404 Protein tyrosine phosphatase, catalytic domain motif I634_09180 SM00507 HNH nucleases I634_09185 SM00316 Ribosomal protein S1-like RNA-binding domain I634_09185 SM00322 K homology RNA-binding domain I634_09450 SM00028 Tetratricopeptide repeats I634_09470 SM00771 ZipA, C-terminal domain (FtsZ-binding) I634_09475 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I634_09475 SM00292 breast cancer carboxy-terminal domain I634_09475 SM00532 Ligase N family I634_09490 SM00849 Metallo-beta-lactamase superfamily I634_09495 SM00382 ATPases associated with a variety of cellular activities I634_09520 SM00729 Elongator protein 3, MiaB family, Radical SAM I634_09585 SM00861 Transketolase, pyrimidine binding domain I634_09600 SM00881 CoA binding domain I634_09645 SM00642 Alpha-amylase domain I634_09650 SM00642 Alpha-amylase domain I634_09660 SM00642 Alpha-amylase domain I634_09665 SM00354 helix_turn _helix lactose operon repressor I634_09785 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I634_09800 SM00387 Histidine kinase-like ATPases I634_09805 SM00448 cheY-homologous receiver domain I634_09805 SM00850 LytTr DNA-binding domain I634_09835 SM00857 Resolvase, N terminal domain I634_09905 SM00671 Sel1-like repeats. I634_09930 SM00450 Rhodanese Homology Domain I634_09930 SM00849 Metallo-beta-lactamase superfamily I634_09945 SM00028 Tetratricopeptide repeats I634_09945 SM00448 cheY-homologous receiver domain I634_09955 SM00450 Rhodanese Homology Domain I634_09960 SM00054 EF-hand, calcium binding motif I634_09965 SM00487 DEAD-like helicases superfamily I634_09965 SM00490 helicase superfamily c-terminal domain I634_09970 SM00882 Coenzyme A transferase I634_09975 SM00882 Coenzyme A transferase I634_09990 SM00387 Histidine kinase-like ATPases I634_10000 SM00052 Putative diguanylate phosphodiesterase I634_10045 SM00861 Transketolase, pyrimidine binding domain I634_10060 SM00220 Serine/Threonine protein kinases, catalytic domain I634_10095 SM00945 ProQ/FINO family I634_10100 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I634_10100 SM00245 tail specific protease I634_10160 SM00981 I634_10160 I634_10170 SM00382 ATPases associated with a variety of cellular activities I634_10360 SM00100 Cyclic nucleotide-monophosphate binding domain I634_10360 SM00419 helix_turn_helix, cAMP Regulatory protein I634_10385 SM00047 Lysozyme subfamily 2 I634_10405 SM00450 Rhodanese Homology Domain I634_10415 SM01144 I634_10415 I634_10505 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I634_10505 SM00465 GIY-YIG type nucleases (URI domain) I634_10510 SM00421 helix_turn_helix, Lux Regulon I634_10510 SM00448 cheY-homologous receiver domain I634_10615 SM00382 ATPases associated with a variety of cellular activities I634_10625 SM00843 I634_10625 I634_10630 SM00344 helix_turn_helix ASNC type I634_10635 SM01002 Alanine dehydrogenase/PNT, C-terminal domain I634_10635 SM01003 Alanine dehydrogenase/PNT, N-terminal domain I634_10640 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family I634_10645 SM00028 Tetratricopeptide repeats I634_10660 SM00411 bacterial (prokaryotic) histone like domain I634_10665 SM00316 Ribosomal protein S1-like RNA-binding domain I634_10685 SM00434 DNA Topoisomerase IV I634_10725 SM00052 Putative diguanylate phosphodiesterase I634_10725 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_10725 SM00267 diguanylate cyclase I634_10745 SM01130 I634_10745 I634_10825 SM00421 helix_turn_helix, Lux Regulon I634_10825 SM00448 cheY-homologous receiver domain I634_10855 SM00642 Alpha-amylase domain I634_10865 SM00852 Probable molybdopterin binding domain I634_10885 SM00382 ATPases associated with a variety of cellular activities I634_10945 SM00530 Helix-turn-helix XRE-family like proteins I634_11000 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. I634_11010 SM00563 Phosphate acyltransferases I634_11060 SM00342 helix_turn_helix, arabinose operon control protein I634_11095 SM00893 Electron transfer flavoprotein domain I634_11100 SM00893 Electron transfer flavoprotein domain I634_11110 SM00528 Domain in histone-like proteins of HNS family I634_11130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_11130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_11145 SM00797 Allophanate hydrolase subunit 2 I634_11150 SM00796 Allophanate hydrolase subunit 1 I634_11205 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I634_11250 SM00342 helix_turn_helix, arabinose operon control protein I634_11265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I634_11300 SM00829 Enoylreductase I634_11315 SM00855 Phosphoglycerate mutase family I634_11345 SM00729 Elongator protein 3, MiaB family, Radical SAM I634_11350 SM00382 ATPases associated with a variety of cellular activities I634_11380 SM00852 Probable molybdopterin binding domain I634_11500 SM00052 Putative diguanylate phosphodiesterase I634_11500 SM00267 diguanylate cyclase I634_11505 SM00849 Metallo-beta-lactamase superfamily I634_11540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I634_11545 SM00450 Rhodanese Homology Domain I634_11560 SM00382 ATPases associated with a variety of cellular activities I634_11560 SM00448 cheY-homologous receiver domain I634_11570 SM00387 Histidine kinase-like ATPases I634_11570 SM00388 His Kinase A (phosphoacceptor) domain I634_11575 SM00448 cheY-homologous receiver domain I634_11580 SM00387 Histidine kinase-like ATPases I634_11580 SM00388 His Kinase A (phosphoacceptor) domain I634_11580 SM00448 cheY-homologous receiver domain I634_11650 SM00631 I634_11650 I634_11655 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I634_11670 SM01350 I634_11670 I634_11675 SM00642 Alpha-amylase domain I634_11680 SM00642 Alpha-amylase domain I634_11690 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I634_11755 SM00749 bacterial OsmY and nodulation domain I634_11835 SM00354 helix_turn _helix lactose operon repressor I634_11840 SM00858 I634_11840 I634_11880 SM00710 Parallel beta-helix repeats I634_11890 SM00387 Histidine kinase-like ATPases I634_11890 SM00388 His Kinase A (phosphoacceptor) domain I634_11890 SM00448 cheY-homologous receiver domain I634_11910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_11910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_11935 SM00052 Putative diguanylate phosphodiesterase I634_11935 SM00267 diguanylate cyclase I634_11945 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I634_11950 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_11950 SM00387 Histidine kinase-like ATPases I634_11990 SM00849 Metallo-beta-lactamase superfamily I634_11995 SM00257 Lysin motif I634_12020 SM00840 I634_12020 I634_12035 SM00098 Alkaline phosphatase homologues I634_12040 SM00098 Alkaline phosphatase homologues I634_12055 SM00244 prohibitin homologues I634_12075 SM00642 Alpha-amylase domain I634_12085 SM00829 Enoylreductase I634_12090 SM01060 I634_12090 I634_12095 SM00829 Enoylreductase I634_12170 SM00859 Semialdehyde dehydrogenase, NAD binding domain I634_12180 SM01007 Class II Aldolase and Adducin N-terminal domain I634_12185 SM00100 Cyclic nucleotide-monophosphate binding domain I634_12185 SM00419 helix_turn_helix, cAMP Regulatory protein I634_12200 SM00825 Beta-ketoacyl synthase I634_12250 SM00422 helix_turn_helix, mercury resistance I634_12255 SM00829 Enoylreductase I634_12270 SM00382 ATPases associated with a variety of cellular activities I634_12280 SM00387 Histidine kinase-like ATPases I634_12280 SM00388 His Kinase A (phosphoacceptor) domain I634_12280 SM00448 cheY-homologous receiver domain I634_12395 SM00345 helix_turn_helix gluconate operon transcriptional repressor I634_12440 SM00341 Helicase and RNase D C-terminal I634_12440 SM00474 3'-5' exonuclease I634_12470 SM00487 DEAD-like helicases superfamily I634_12470 SM00488 I634_12470 I634_12470 SM00491 I634_12470 I634_12480 SM00014 Acid phosphatase homologues I634_12495 SM00642 Alpha-amylase domain I634_12610 SM00387 Histidine kinase-like ATPases I634_12615 SM00493 I634_12615 I634_12625 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_12625 SM00448 cheY-homologous receiver domain I634_12625 SM00911 HWE histidine kinase I634_12665 SM00862 Transcriptional regulatory protein, C terminal I634_12675 SM00091 PAS domain I634_12675 SM00267 diguanylate cyclase I634_12695 SM00028 Tetratricopeptide repeats I634_12705 SM00382 ATPases associated with a variety of cellular activities I634_12705 SM01086 C-terminal, D2-small domain, of ClpB protein I634_12715 SM00363 S4 RNA-binding domain I634_12785 SM00861 Transketolase, pyrimidine binding domain I634_12840 SM00382 ATPases associated with a variety of cellular activities I634_12850 SM00382 ATPases associated with a variety of cellular activities I634_12885 SM00358 Double-stranded RNA binding motif I634_12885 SM00535 Ribonuclease III family I634_12895 SM00838 Elongation factor G C-terminus I634_12955 SM00938 Nitrogen regulatory protein P-II I634_13040 SM00904 Riboflavin kinase I634_13085 SM00563 Phosphate acyltransferases I634_13105 SM00411 bacterial (prokaryotic) histone like domain I634_13110 SM00382 ATPases associated with a variety of cellular activities I634_13110 SM00464 Found in ATP-dependent protease La (LON) I634_13115 SM00382 ATPases associated with a variety of cellular activities I634_13115 SM00994 ClpX C4-type zinc finger I634_13115 SM01086 C-terminal, D2-small domain, of ClpB protein I634_13165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_13185 SM00116 Domain in cystathionine beta-synthase and other proteins. I634_13185 SM01240 I634_13185 I634_13205 SM00382 ATPases associated with a variety of cellular activities I634_13210 SM00564 beta-propeller repeat I634_13215 SM00028 Tetratricopeptide repeats I634_13235 SM00028 Tetratricopeptide repeats I634_13235 SM00257 Lysin motif I634_13245 SM00562 I634_13245 I634_13275 SM00382 ATPases associated with a variety of cellular activities I634_13320 SM00850 LytTr DNA-binding domain I634_13335 SM01323 I634_13335 I634_13400 SM00382 ATPases associated with a variety of cellular activities I634_13420 SM00098 Alkaline phosphatase homologues I634_13425 SM00260 Two component signalling adaptor domain I634_13425 SM00448 cheY-homologous receiver domain I634_13595 SM00710 Parallel beta-helix repeats I634_13635 SM00382 ATPases associated with a variety of cellular activities I634_13700 SM00052 Putative diguanylate phosphodiesterase I634_13700 SM00267 diguanylate cyclase I634_13715 SM00354 helix_turn _helix lactose operon repressor I634_13765 SM00967 RNA 2'-O ribose methyltransferase substrate binding I634_13810 SM00422 helix_turn_helix, mercury resistance I634_13850 SM00953 I634_13850 I634_13870 SM00448 cheY-homologous receiver domain I634_13870 SM00862 Transcriptional regulatory protein, C terminal I634_13875 SM00387 Histidine kinase-like ATPases I634_13875 SM00388 His Kinase A (phosphoacceptor) domain I634_13920 SM01092 CO dehydrogenase flavoprotein C-terminal domain I634_13925 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I634_13970 SM01322 I634_13970 I634_14015 SM00487 DEAD-like helicases superfamily I634_14015 SM00490 helicase superfamily c-terminal domain I634_14035 SM00028 Tetratricopeptide repeats I634_14035 SM00387 Histidine kinase-like ATPases I634_14035 SM00388 His Kinase A (phosphoacceptor) domain I634_14035 SM00448 cheY-homologous receiver domain I634_14045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_14045 SM00387 Histidine kinase-like ATPases I634_14045 SM00388 His Kinase A (phosphoacceptor) domain I634_14045 SM00448 cheY-homologous receiver domain I634_14055 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I634_14080 SM00988 UreE urease accessory protein, N-terminal domain I634_14105 SM00382 ATPases associated with a variety of cellular activities I634_14135 SM00387 Histidine kinase-like ATPases I634_14135 SM00388 His Kinase A (phosphoacceptor) domain I634_14135 SM00448 cheY-homologous receiver domain I634_14140 SM00421 helix_turn_helix, Lux Regulon I634_14140 SM00448 cheY-homologous receiver domain I634_14170 SM00470 ParB-like nuclease domain I634_14200 SM00052 Putative diguanylate phosphodiesterase I634_14200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_14200 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_14200 SM00091 PAS domain I634_14200 SM00267 diguanylate cyclase I634_14205 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_14205 SM00091 PAS domain I634_14205 SM00267 diguanylate cyclase I634_14215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_14220 SM00052 Putative diguanylate phosphodiesterase I634_14220 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_14220 SM00091 PAS domain I634_14220 SM00267 diguanylate cyclase I634_14255 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins I634_14275 SM00382 ATPases associated with a variety of cellular activities I634_14285 SM00696 Repeats found in Drosophila proteins. I634_14335 SM00422 helix_turn_helix, mercury resistance I634_14345 SM00028 Tetratricopeptide repeats I634_14435 SM01011 Aminopeptidase P, N-terminal domain I634_14455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_14455 SM00387 Histidine kinase-like ATPases I634_14455 SM00388 His Kinase A (phosphoacceptor) domain I634_14455 SM00448 cheY-homologous receiver domain I634_14535 SM00345 helix_turn_helix gluconate operon transcriptional repressor I634_14535 SM00895 I634_14535 I634_14545 SM00644 I634_14545 I634_14600 SM00957 SecA DEAD-like domain I634_14600 SM00958 SecA preprotein cross-linking domain I634_14615 SM00864 Tubulin/FtsZ family, GTPase domain I634_14615 SM00865 Tubulin/FtsZ family, C-terminal domain I634_14620 SM00842 Cell division protein FtsA I634_14750 SM00028 Tetratricopeptide repeats I634_14750 SM00267 diguanylate cyclase I634_14760 SM00382 ATPases associated with a variety of cellular activities I634_14760 SM00448 cheY-homologous receiver domain I634_14765 SM00387 Histidine kinase-like ATPases I634_14815 SM00732 Likely ribonuclease with RNase H fold. I634_14825 SM00382 ATPases associated with a variety of cellular activities I634_14905 SM00530 Helix-turn-helix XRE-family like proteins I634_14915 SM00360 RNA recognition motif I634_14945 SM00986 Uracil DNA glycosylase superfamily I634_14945 SM00987 UreE urease accessory protein, C-terminal domain I634_14975 SM00829 Enoylreductase I634_14985 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I634_14990 SM00226 Low molecular weight phosphatase family I634_15005 SM00448 cheY-homologous receiver domain I634_15015 SM00448 cheY-homologous receiver domain I634_15015 SM00862 Transcriptional regulatory protein, C terminal I634_15020 SM00387 Histidine kinase-like ATPases I634_15020 SM00388 His Kinase A (phosphoacceptor) domain I634_15060 SM00342 helix_turn_helix, arabinose operon control protein I634_15115 SM00749 bacterial OsmY and nodulation domain I634_15140 SM00421 helix_turn_helix, Lux Regulon I634_15140 SM00448 cheY-homologous receiver domain I634_15160 SM00345 helix_turn_helix gluconate operon transcriptional repressor I634_15160 SM00895 I634_15160 I634_15185 SM00267 diguanylate cyclase I634_15185 SM00448 cheY-homologous receiver domain I634_15230 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_15230 SM00091 PAS domain I634_15230 SM00387 Histidine kinase-like ATPases I634_15230 SM00388 His Kinase A (phosphoacceptor) domain I634_15230 SM00448 cheY-homologous receiver domain I634_15235 SM00287 Bacterial SH3 domain homologues I634_15235 SM00644 I634_15235 I634_15275 SM00450 Rhodanese Homology Domain I634_15425 SM00448 cheY-homologous receiver domain I634_15440 SM01230 I634_15440 I634_15450 SM00091 PAS domain I634_15450 SM00387 Histidine kinase-like ATPases I634_15450 SM00388 His Kinase A (phosphoacceptor) domain I634_15455 SM00382 ATPases associated with a variety of cellular activities I634_15455 SM00448 cheY-homologous receiver domain I634_15460 SM00073 Histidine Phosphotransfer domain I634_15465 SM00563 Phosphate acyltransferases I634_15480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_15480 SM00091 PAS domain I634_15480 SM00267 diguanylate cyclase I634_15490 SM00244 prohibitin homologues I634_15500 SM00387 Histidine kinase-like ATPases I634_15500 SM00388 His Kinase A (phosphoacceptor) domain I634_15500 SM00448 cheY-homologous receiver domain I634_15500 SM01358 I634_15500 I634_15580 SM00345 helix_turn_helix gluconate operon transcriptional repressor I634_15580 SM00895 I634_15580 I634_15610 SM00028 Tetratricopeptide repeats I634_15625 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I634_15645 SM00267 diguanylate cyclase I634_15675 SM00387 Histidine kinase-like ATPases I634_15675 SM00448 cheY-homologous receiver domain I634_15685 SM00886 Stress responsive A/B Barrel Domain I634_15695 SM00382 ATPases associated with a variety of cellular activities I634_15760 SM00849 Metallo-beta-lactamase superfamily I634_15760 SM01027 Beta-Casp domain I634_15780 SM00996 S-adenosyl-L-homocysteine hydrolase I634_15780 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain I634_15815 SM00564 beta-propeller repeat I634_15820 SM00062 Bacterial periplasmic substrate-binding proteins I634_15835 SM00382 ATPases associated with a variety of cellular activities I634_15865 SM00729 Elongator protein 3, MiaB family, Radical SAM I634_15890 SM00421 helix_turn_helix, Lux Regulon I634_15890 SM00448 cheY-homologous receiver domain I634_15895 SM00091 PAS domain I634_15895 SM00387 Histidine kinase-like ATPases I634_15895 SM00388 His Kinase A (phosphoacceptor) domain I634_15895 SM00448 cheY-homologous receiver domain I634_15900 SM00897 FIST N domain I634_15900 SM01204 I634_15900 I634_15905 SM00900 I634_15905 I634_15915 SM00421 helix_turn_helix, Lux Regulon I634_15915 SM00448 cheY-homologous receiver domain I634_15925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_15925 SM00091 PAS domain I634_15925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_15960 SM00965 Secretin and TonB N terminus short domain I634_15985 SM00421 helix_turn_helix, Lux Regulon I634_16015 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins I634_16020 SM00421 helix_turn_helix, Lux Regulon I634_16020 SM00448 cheY-homologous receiver domain I634_16025 SM00387 Histidine kinase-like ATPases I634_16030 SM00822 I634_16030 I634_16045 SM00487 DEAD-like helicases superfamily I634_16045 SM00490 helicase superfamily c-terminal domain I634_16085 SM00710 Parallel beta-helix repeats I634_16090 SM00345 helix_turn_helix gluconate operon transcriptional repressor I634_16090 SM00895 I634_16090 I634_16115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_16115 SM00091 PAS domain I634_16115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_16120 SM00155 Phospholipase D. Active site motifs. I634_16150 SM00448 cheY-homologous receiver domain I634_16160 SM00387 Histidine kinase-like ATPases I634_16165 SM00849 Metallo-beta-lactamase superfamily I634_16170 SM00486 DNA polymerase type-B family I634_16185 SM00360 RNA recognition motif I634_16220 SM00986 Uracil DNA glycosylase superfamily I634_16220 SM00987 UreE urease accessory protein, C-terminal domain I634_16225 SM00267 diguanylate cyclase I634_16320 SM00173 Ras subfamily of RAS small GTPases I634_16320 SM00175 Rab subfamily of small GTPases I634_16325 SM00052 Putative diguanylate phosphodiesterase I634_16325 SM00267 diguanylate cyclase I634_16345 SM00563 Phosphate acyltransferases I634_16475 SM00052 Putative diguanylate phosphodiesterase I634_16475 SM00267 diguanylate cyclase I634_16495 SM00849 Metallo-beta-lactamase superfamily I634_16535 SM00530 Helix-turn-helix XRE-family like proteins I634_16555 SM00903 Flavin reductase like domain I634_16590 SM00100 Cyclic nucleotide-monophosphate binding domain I634_16605 SM00849 Metallo-beta-lactamase superfamily I634_16655 SM00900 I634_16655 I634_16740 SM00028 Tetratricopeptide repeats I634_16750 SM00267 diguanylate cyclase I634_16750 SM00448 cheY-homologous receiver domain I634_16755 SM00479 I634_16755 I634_16760 SM00116 Domain in cystathionine beta-synthase and other proteins. I634_16775 SM00387 Histidine kinase-like ATPases I634_16775 SM00388 His Kinase A (phosphoacceptor) domain I634_16775 SM00448 cheY-homologous receiver domain I634_16805 SM00421 helix_turn_helix, Lux Regulon I634_16805 SM00448 cheY-homologous receiver domain I634_16900 SM00984 UDP binding domain I634_17015 SM00662 RNA polymerases D I634_17020 SM00363 S4 RNA-binding domain I634_17020 SM01390 I634_17020 I634_17085 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I634_17090 SM01374 I634_17090 I634_17095 SM00387 Histidine kinase-like ATPases I634_17095 SM00388 His Kinase A (phosphoacceptor) domain I634_17095 SM00448 cheY-homologous receiver domain I634_17120 SM00967 RNA 2'-O ribose methyltransferase substrate binding I634_17125 SM00316 Ribosomal protein S1-like RNA-binding domain I634_17125 SM00357 Cold shock protein domain I634_17125 SM00955 I634_17125 I634_17170 SM00671 Sel1-like repeats. I634_17210 SM00387 Histidine kinase-like ATPases I634_17210 SM00388 His Kinase A (phosphoacceptor) domain I634_17210 SM00448 cheY-homologous receiver domain I634_17235 SM00344 helix_turn_helix ASNC type I634_17245 SM00357 Cold shock protein domain I634_17275 SM00448 cheY-homologous receiver domain I634_17285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_17285 SM00387 Histidine kinase-like ATPases I634_17285 SM00388 His Kinase A (phosphoacceptor) domain I634_17290 SM00448 cheY-homologous receiver domain I634_17300 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I634_17360 SM00382 ATPases associated with a variety of cellular activities I634_17365 SM00421 helix_turn_helix, Lux Regulon I634_17390 SM00382 ATPases associated with a variety of cellular activities I634_17390 SM01086 C-terminal, D2-small domain, of ClpB protein I634_17405 SM00487 DEAD-like helicases superfamily I634_17405 SM00490 helicase superfamily c-terminal domain I634_17420 SM00919 Malic enzyme, NAD binding domain I634_17420 SM01274 I634_17420 I634_17470 SM00052 Putative diguanylate phosphodiesterase I634_17485 SM00382 ATPases associated with a variety of cellular activities I634_17565 SM00052 Putative diguanylate phosphodiesterase I634_17580 SM00382 ATPases associated with a variety of cellular activities I634_17585 SM00448 cheY-homologous receiver domain I634_17585 SM00862 Transcriptional regulatory protein, C terminal I634_17590 SM00387 Histidine kinase-like ATPases I634_17590 SM00388 His Kinase A (phosphoacceptor) domain I634_17600 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I634_17610 SM00838 Elongation factor G C-terminus I634_17610 SM00889 Elongation factor G, domain IV I634_17625 SM00663 RNA polymerase I subunit A N-terminus I634_17650 SM00649 Ribosomal protein L11/L12 I634_17670 SM00382 ATPases associated with a variety of cellular activities I634_17690 SM00487 DEAD-like helicases superfamily I634_17690 SM00490 helicase superfamily c-terminal domain I634_17725 SM00642 Alpha-amylase domain I634_17760 SM00487 DEAD-like helicases superfamily I634_17760 SM00490 helicase superfamily c-terminal domain I634_17765 SM00849 Metallo-beta-lactamase superfamily I634_17775 SM00841 Elongation factor P, C-terminal I634_17775 SM01185 I634_17775 I634_17850 SM00244 prohibitin homologues I634_17855 SM00244 prohibitin homologues I634_17875 SM01340 I634_17875 I634_17880 SM00257 Lysin motif I634_17880 SM00646 I634_17880 I634_17940 SM00382 ATPases associated with a variety of cellular activities I634_17975 SM00849 Metallo-beta-lactamase superfamily I634_17995 SM00387 Histidine kinase-like ATPases I634_17995 SM00388 His Kinase A (phosphoacceptor) domain I634_18005 SM00382 ATPases associated with a variety of cellular activities I634_18015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_18020 SM00387 Histidine kinase-like ATPases I634_18025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I634_18070 SM00354 helix_turn _helix lactose operon repressor I634_18080 SM00382 ATPases associated with a variety of cellular activities I634_18085 SM00382 ATPases associated with a variety of cellular activities I634_18110 SM00382 ATPases associated with a variety of cellular activities I634_18145 SM00267 diguanylate cyclase I634_18195 SM00116 Domain in cystathionine beta-synthase and other proteins. I634_18210 SM00867 YceI-like domain I634_18240 SM00829 Enoylreductase I634_18245 SM00267 diguanylate cyclase I634_18250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_18250 SM00387 Histidine kinase-like ATPases I634_18250 SM00388 His Kinase A (phosphoacceptor) domain I634_18250 SM00448 cheY-homologous receiver domain I634_18275 SM00420 helix_turn_helix, Deoxyribose operon repressor I634_18275 SM01134 I634_18275 I634_18290 SM00267 diguanylate cyclase I634_18305 SM00342 helix_turn_helix, arabinose operon control protein I634_18305 SM01009 AlkA N-terminal domain I634_18335 SM01002 Alanine dehydrogenase/PNT, C-terminal domain I634_18335 SM01003 Alanine dehydrogenase/PNT, N-terminal domain I634_18360 SM00965 Secretin and TonB N terminus short domain I634_18420 SM00670 Large family of predicted nucleotide-binding domains I634_18445 SM00883 Chaperonin 10 Kd subunit I634_18480 SM00878 Biotin carboxylase C-terminal domain I634_18500 SM00479 I634_18500 I634_18500 SM00990 I634_18500 I634_18530 SM00062 Bacterial periplasmic substrate-binding proteins I634_18550 SM00798 AICARFT/IMPCHase bienzyme I634_18550 SM00851 MGS-like domain I634_18560 SM01209 I634_18560 I634_18560 SM01210 I634_18560 I634_18565 SM00047 Lysozyme subfamily 2 I634_18590 SM00448 cheY-homologous receiver domain I634_18590 SM00862 Transcriptional regulatory protein, C terminal I634_18600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I634_18600 SM00387 Histidine kinase-like ATPases I634_18600 SM00388 His Kinase A (phosphoacceptor) domain I634_18625 SM00363 S4 RNA-binding domain I634_18640 SM00382 ATPases associated with a variety of cellular activities I634_18720 SM00867 YceI-like domain I634_18755 SM00382 ATPases associated with a variety of cellular activities I634_18780 SM00320 WD40 repeats I634_18800 SM00316 Ribosomal protein S1-like RNA-binding domain I634_18800 SM00732 Likely ribonuclease with RNase H fold. I634_18830 SM00631 I634_18830 I634_18930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I634_18930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I634_18930 SM00091 PAS domain I634_18930 SM00267 diguanylate cyclase I634_18935 SM00563 Phosphate acyltransferases I634_18955 SM00382 ATPases associated with a variety of cellular activities I634_19020 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I634_19145 SM00487 DEAD-like helicases superfamily I634_19185 SM00487 DEAD-like helicases superfamily I634_19190 SM00530 Helix-turn-helix XRE-family like proteins I634_19210 SM00354 helix_turn _helix lactose operon repressor I634_19225 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I634_19235 SM01144 I634_19235 I634_19255 SM00382 ATPases associated with a variety of cellular activities I634_19295 SM00470 ParB-like nuclease domain I634_19310 SM01228 I634_19310 I634_19345 SM01234 I634_19345