I636_00010 SM00480 DNA polymerase III beta subunit I636_00020 SM00387 Histidine kinase-like ATPases I636_00020 SM00433 TopoisomeraseII I636_00030 SM00836 DALR anticodon binding domain I636_00070 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs I636_00070 SM00474 3'-5' exonuclease I636_00070 SM00475 5'-3' exonuclease I636_00070 SM00482 DNA polymerase A domain I636_00105 SM00257 Lysin motif I636_00180 SM00481 DNA polymerase alpha chain like domain I636_00270 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain I636_00270 SM01232 I636_00270 I636_00300 SM00052 Putative diguanylate phosphodiesterase I636_00300 SM00267 diguanylate cyclase I636_00310 SM00829 Enoylreductase I636_00315 SM00450 Rhodanese Homology Domain I636_00345 SM00530 Helix-turn-helix XRE-family like proteins I636_00360 SM00052 Putative diguanylate phosphodiesterase I636_00360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I636_00360 SM00267 diguanylate cyclase I636_00375 SM00530 Helix-turn-helix XRE-family like proteins I636_00410 SM00849 Metallo-beta-lactamase superfamily I636_00435 SM00382 ATPases associated with a variety of cellular activities I636_00440 SM00382 ATPases associated with a variety of cellular activities I636_00460 SM00450 Rhodanese Homology Domain I636_00465 SM00849 Metallo-beta-lactamase superfamily I636_00485 SM00421 helix_turn_helix, Lux Regulon I636_00545 SM00490 helicase superfamily c-terminal domain I636_00560 SM00487 DEAD-like helicases superfamily I636_00575 SM00382 ATPases associated with a variety of cellular activities I636_00605 SM00849 Metallo-beta-lactamase superfamily I636_00635 SM00876 Biotin and Thiamin Synthesis associated domain I636_00685 SM00267 diguanylate cyclase I636_00700 SM00072 Guanylate kinase homologues. I636_00705 SM01409 I636_00705 I636_00710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I636_00710 SM00954 Region found in RelA / SpoT proteins I636_00725 SM00487 DEAD-like helicases superfamily I636_00725 SM00490 helicase superfamily c-terminal domain I636_00760 SM00382 ATPases associated with a variety of cellular activities I636_00825 SM00052 Putative diguanylate phosphodiesterase I636_00825 SM01034 Sensors of blue-light using FAD I636_00850 SM00271 DnaJ molecular chaperone homology domain I636_00890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_00910 SM00052 Putative diguanylate phosphodiesterase I636_00910 SM00267 diguanylate cyclase I636_00925 SM00341 Helicase and RNase D C-terminal I636_00925 SM00487 DEAD-like helicases superfamily I636_00925 SM00490 helicase superfamily c-terminal domain I636_00925 SM00956 I636_00925 I636_00930 SM00924 MgtE intracellular N domain I636_00940 SM00267 diguanylate cyclase I636_00940 SM00448 cheY-homologous receiver domain I636_00950 SM00971 Serine acetyltransferase, N-terminal I636_00990 SM00014 Acid phosphatase homologues I636_01030 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I636_01080 SM00354 helix_turn _helix lactose operon repressor I636_01150 SM00420 helix_turn_helix, Deoxyribose operon repressor I636_01150 SM01134 I636_01150 I636_01190 SM00965 Secretin and TonB N terminus short domain I636_01200 SM00028 Tetratricopeptide repeats I636_01205 SM00382 ATPases associated with a variety of cellular activities I636_01275 SM00316 Ribosomal protein S1-like RNA-binding domain I636_01305 SM01038 Beta galactosidase small chain I636_01310 SM00448 cheY-homologous receiver domain I636_01310 SM00862 Transcriptional regulatory protein, C terminal I636_01315 SM00387 Histidine kinase-like ATPases I636_01340 SM00478 endonuclease III I636_01340 SM00525 I636_01340 I636_01360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_01360 SM00387 Histidine kinase-like ATPases I636_01360 SM00388 His Kinase A (phosphoacceptor) domain I636_01365 SM00448 cheY-homologous receiver domain I636_01365 SM00862 Transcriptional regulatory protein, C terminal I636_01545 SM00422 helix_turn_helix, mercury resistance I636_01665 SM00448 cheY-homologous receiver domain I636_01665 SM00862 Transcriptional regulatory protein, C terminal I636_01670 SM00387 Histidine kinase-like ATPases I636_01700 SM00422 helix_turn_helix, mercury resistance I636_01830 SM00507 HNH nucleases I636_01835 SM00316 Ribosomal protein S1-like RNA-binding domain I636_01835 SM00322 K homology RNA-binding domain I636_01900 SM00354 helix_turn _helix lactose operon repressor I636_01915 SM00267 diguanylate cyclase I636_01935 SM00342 helix_turn_helix, arabinose operon control protein I636_01935 SM00387 Histidine kinase-like ATPases I636_01935 SM00388 His Kinase A (phosphoacceptor) domain I636_01935 SM00448 cheY-homologous receiver domain I636_01950 SM00354 helix_turn _helix lactose operon repressor I636_02000 SM00855 Phosphoglycerate mutase family I636_02015 SM00671 Sel1-like repeats. I636_02020 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I636_02020 SM00382 ATPases associated with a variety of cellular activities I636_02025 SM01403 I636_02025 I636_02045 SM01382 I636_02045 I636_02045 SM01383 I636_02045 I636_02060 SM00322 K homology RNA-binding domain I636_02110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_02110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_02135 SM00487 DEAD-like helicases superfamily I636_02135 SM00490 helicase superfamily c-terminal domain I636_02165 SM00342 helix_turn_helix, arabinose operon control protein I636_02175 SM00938 Nitrogen regulatory protein P-II I636_02195 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain I636_02230 SM00073 Histidine Phosphotransfer domain I636_02230 SM00387 Histidine kinase-like ATPases I636_02230 SM00388 His Kinase A (phosphoacceptor) domain I636_02230 SM00448 cheY-homologous receiver domain I636_02235 SM00434 DNA Topoisomerase IV I636_02245 SM00052 Putative diguanylate phosphodiesterase I636_02245 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I636_02245 SM00091 PAS domain I636_02245 SM00267 diguanylate cyclase I636_02250 SM01150 I636_02250 I636_02325 SM00965 Secretin and TonB N terminus short domain I636_02345 SM00842 Cell division protein FtsA I636_02355 SM00919 Malic enzyme, NAD binding domain I636_02355 SM01274 I636_02355 I636_02380 SM01060 I636_02380 I636_02395 SM00052 Putative diguanylate phosphodiesterase I636_02425 SM00859 Semialdehyde dehydrogenase, NAD binding domain I636_02430 SM00851 MGS-like domain I636_02440 SM00448 cheY-homologous receiver domain I636_02440 SM00862 Transcriptional regulatory protein, C terminal I636_02445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_02445 SM00387 Histidine kinase-like ATPases I636_02445 SM00388 His Kinase A (phosphoacceptor) domain I636_02480 SM00450 Rhodanese Homology Domain I636_02520 SM00479 I636_02520 I636_02585 SM00267 diguanylate cyclase I636_02590 SM01004 Delta-aminolevulinic acid dehydratase I636_02600 SM00487 DEAD-like helicases superfamily I636_02600 SM00490 helicase superfamily c-terminal domain I636_02610 SM00357 Cold shock protein domain I636_02610 SM00382 ATPases associated with a variety of cellular activities I636_02610 SM00959 Rho termination factor, N-terminal domain I636_02620 SM00387 Histidine kinase-like ATPases I636_02620 SM00388 His Kinase A (phosphoacceptor) domain I636_02620 SM00448 cheY-homologous receiver domain I636_02630 SM01001 AIR carboxylase I636_02685 SM00788 Adenylosuccinate synthetase I636_02735 SM01005 Alanine racemase, C-terminal domain I636_02760 SM00062 Bacterial periplasmic substrate-binding proteins I636_02790 SM00670 Large family of predicted nucleotide-binding domains I636_02810 SM00530 Helix-turn-helix XRE-family like proteins I636_02975 SM00257 Lysin motif I636_03015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_03015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_03015 SM01049 I636_03015 I636_03035 SM00287 Bacterial SH3 domain homologues I636_03040 SM01118 I636_03040 I636_03050 SM00927 DNA mismatch repair enzyme MutH I636_03060 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I636_03080 SM00448 cheY-homologous receiver domain I636_03085 SM00267 diguanylate cyclase I636_03110 SM00487 DEAD-like helicases superfamily I636_03110 SM00490 helicase superfamily c-terminal domain I636_03125 SM00670 Large family of predicted nucleotide-binding domains I636_03140 SM00487 DEAD-like helicases superfamily I636_03140 SM00490 helicase superfamily c-terminal domain I636_03145 SM00028 Tetratricopeptide repeats I636_03185 SM00387 Histidine kinase-like ATPases I636_03185 SM00433 TopoisomeraseII I636_03225 SM00841 Elongation factor P, C-terminal I636_03225 SM01185 I636_03225 I636_03280 SM00014 Acid phosphatase homologues I636_03295 SM01012 I636_03295 I636_03325 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I636_03340 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I636_03340 SM00091 PAS domain I636_03340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_03355 SM00382 ATPases associated with a variety of cellular activities I636_03415 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I636_03420 SM01007 Class II Aldolase and Adducin N-terminal domain I636_03450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_03450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_03460 SM00400 zinc finger I636_03460 SM00493 I636_03460 I636_03460 SM00766 DNA primase DnaG DnaB-binding I636_03490 SM01207 I636_03490 I636_03495 SM00905 Dihydroneopterin aldolase I636_03530 SM00530 Helix-turn-helix XRE-family like proteins I636_03540 SM00387 Histidine kinase-like ATPases I636_03545 SM00448 cheY-homologous receiver domain I636_03545 SM00862 Transcriptional regulatory protein, C terminal I636_03550 SM00387 Histidine kinase-like ATPases I636_03550 SM00388 His Kinase A (phosphoacceptor) domain I636_03560 SM00710 Parallel beta-helix repeats I636_03595 SM00028 Tetratricopeptide repeats I636_03600 SM00448 cheY-homologous receiver domain I636_03600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I636_03605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I636_03605 SM00091 PAS domain I636_03605 SM00387 Histidine kinase-like ATPases I636_03605 SM00388 His Kinase A (phosphoacceptor) domain I636_03605 SM00448 cheY-homologous receiver domain I636_03660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_03660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_03675 SM00650 Ribosomal RNA adenine dimethylases I636_03695 SM00271 DnaJ molecular chaperone homology domain I636_03740 SM00954 Region found in RelA / SpoT proteins I636_03770 SM00822 I636_03770 I636_03775 SM01236 I636_03775 I636_03820 SM00387 Histidine kinase-like ATPases I636_03820 SM00388 His Kinase A (phosphoacceptor) domain I636_03825 SM00448 cheY-homologous receiver domain I636_03825 SM00862 Transcriptional regulatory protein, C terminal I636_03870 SM00116 Domain in cystathionine beta-synthase and other proteins. I636_03870 SM00924 MgtE intracellular N domain I636_03900 SM00382 ATPases associated with a variety of cellular activities I636_03930 SM00382 ATPases associated with a variety of cellular activities I636_03965 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I636_03970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I636_04030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I636_04030 SM00091 PAS domain I636_04030 SM00387 Histidine kinase-like ATPases I636_04030 SM00388 His Kinase A (phosphoacceptor) domain I636_04030 SM00448 cheY-homologous receiver domain I636_04055 SM00861 Transketolase, pyrimidine binding domain I636_04060 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I636_04125 SM00382 ATPases associated with a variety of cellular activities I636_04160 SM00347 helix_turn_helix multiple antibiotic resistance protein I636_04170 SM01263 I636_04170 I636_04190 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I636_04190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_04235 SM00345 helix_turn_helix gluconate operon transcriptional repressor I636_04235 SM00866 I636_04235 I636_04275 SM00382 ATPases associated with a variety of cellular activities I636_04355 SM01321 I636_04355 I636_04370 SM00382 ATPases associated with a variety of cellular activities I636_04425 SM00382 ATPases associated with a variety of cellular activities I636_04475 SM00850 LytTr DNA-binding domain I636_04490 SM00448 cheY-homologous receiver domain I636_04495 SM00091 PAS domain I636_04515 SM00729 Elongator protein 3, MiaB family, Radical SAM I636_04525 SM00487 DEAD-like helicases superfamily I636_04525 SM00490 helicase superfamily c-terminal domain I636_04545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I636_04560 SM01329 I636_04560 I636_04565 SM00917 LeuA allosteric (dimerisation) domain I636_04575 SM01192 I636_04575 I636_04575 SM01193 I636_04575 I636_04585 SM00533 DNA-binding domain of DNA mismatch repair MUTS family I636_04585 SM00534 ATPase domain of DNA mismatch repair MUTS family I636_04595 SM00382 ATPases associated with a variety of cellular activities I636_04600 SM00382 ATPases associated with a variety of cellular activities I636_04620 SM00382 ATPases associated with a variety of cellular activities I636_04690 SM00382 ATPases associated with a variety of cellular activities I636_04730 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I636_04735 SM01329 I636_04735 I636_04755 SM00267 diguanylate cyclase I636_04815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I636_04860 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I636_04870 SM00935 Outer membrane protein (OmpH-like) I636_04895 SM00481 DNA polymerase alpha chain like domain I636_04905 SM00977 TilS substrate C-terminal domain I636_04910 SM00267 diguanylate cyclase I636_04935 SM00062 Bacterial periplasmic substrate-binding proteins I636_04940 SM01211 I636_04940 I636_04995 SM00421 helix_turn_helix, Lux Regulon I636_05035 SM00858 I636_05035 I636_05040 SM00260 Two component signalling adaptor domain I636_05040 SM00448 cheY-homologous receiver domain I636_05045 SM00138 Methyltransferase, chemotaxis proteins I636_05090 SM00047 Lysozyme subfamily 2 I636_05170 SM00858 I636_05170 I636_05185 SM00822 I636_05185 I636_05265 SM00382 ATPases associated with a variety of cellular activities I636_05270 SM00387 Histidine kinase-like ATPases I636_05270 SM00388 His Kinase A (phosphoacceptor) domain I636_05275 SM00382 ATPases associated with a variety of cellular activities I636_05275 SM00448 cheY-homologous receiver domain I636_05300 SM00382 ATPases associated with a variety of cellular activities I636_05360 SM00382 ATPases associated with a variety of cellular activities I636_05360 SM00962 SRP54-type protein, GTPase domain I636_05375 SM00448 cheY-homologous receiver domain I636_05385 SM00073 Histidine Phosphotransfer domain I636_05385 SM00260 Two component signalling adaptor domain I636_05385 SM00387 Histidine kinase-like ATPases I636_05385 SM01231 I636_05385 I636_05390 SM00448 cheY-homologous receiver domain I636_05400 SM00260 Two component signalling adaptor domain I636_05405 SM00260 Two component signalling adaptor domain I636_05425 SM01018 B12 binding domain I636_05450 SM00947 Carbonic anhydrase I636_05455 SM00947 Carbonic anhydrase I636_05490 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I636_05515 SM00382 ATPases associated with a variety of cellular activities I636_05520 SM00382 ATPases associated with a variety of cellular activities I636_05540 SM00382 ATPases associated with a variety of cellular activities I636_05565 SM00091 PAS domain I636_05565 SM00382 ATPases associated with a variety of cellular activities I636_05580 SM00344 helix_turn_helix ASNC type I636_05585 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I636_05620 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I636_05635 SM00028 Tetratricopeptide repeats I636_05670 SM00028 Tetratricopeptide repeats I636_05745 SM00829 Enoylreductase I636_05760 SM00347 helix_turn_helix multiple antibiotic resistance protein I636_05775 SM00530 Helix-turn-helix XRE-family like proteins I636_05825 SM00479 I636_05825 I636_05855 SM00487 DEAD-like helicases superfamily I636_05895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I636_05920 SM00422 helix_turn_helix, mercury resistance I636_05940 SM00671 Sel1-like repeats. I636_05990 SM00422 helix_turn_helix, mercury resistance I636_06010 SM00422 helix_turn_helix, mercury resistance I636_06015 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I636_06145 SM00382 ATPases associated with a variety of cellular activities I636_06185 SM00382 ATPases associated with a variety of cellular activities I636_06205 SM00327 von Willebrand factor (vWF) type A domain I636_06220 SM00778 Zinc-binding domain of primase-helicase I636_06290 SM00530 Helix-turn-helix XRE-family like proteins I636_06300 SM00836 DALR anticodon binding domain I636_06300 SM01016 Arginyl tRNA synthetase N terminal dom I636_06330 SM00267 diguanylate cyclase I636_06365 SM00937 I636_06365 I636_06420 SM00463 Small MutS-related domain I636_06450 SM00763 PrkA AAA domain I636_06480 SM00965 Secretin and TonB N terminus short domain I636_06495 SM00479 I636_06495 I636_06515 SM00357 Cold shock protein domain I636_06530 SM00478 endonuclease III I636_06540 SM00900 I636_06540 I636_06570 SM00487 DEAD-like helicases superfamily I636_06570 SM00490 helicase superfamily c-terminal domain I636_06695 SM00267 diguanylate cyclase I636_06720 SM00028 Tetratricopeptide repeats I636_06725 SM00327 von Willebrand factor (vWF) type A domain I636_06765 SM00052 Putative diguanylate phosphodiesterase I636_06765 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I636_06765 SM00091 PAS domain I636_06765 SM00267 diguanylate cyclase I636_06775 SM00855 Phosphoglycerate mutase family I636_06785 SM01091 Transporter associated domain I636_06795 SM00382 ATPases associated with a variety of cellular activities I636_06795 SM00962 SRP54-type protein, GTPase domain I636_06795 SM00963 SRP54-type protein, helical bundle domain I636_06845 SM00382 ATPases associated with a variety of cellular activities I636_06895 SM00830 Chorismate mutase type II I636_06900 SM00830 Chorismate mutase type II I636_06905 SM00448 cheY-homologous receiver domain I636_06920 SM00331 Sigma factor PP2C-like phosphatases I636_06920 SM00448 cheY-homologous receiver domain I636_06930 SM00052 Putative diguanylate phosphodiesterase I636_06930 SM00267 diguanylate cyclase I636_06940 SM00387 Histidine kinase-like ATPases I636_06940 SM00388 His Kinase A (phosphoacceptor) domain I636_06950 SM00382 ATPases associated with a variety of cellular activities I636_06950 SM00448 cheY-homologous receiver domain I636_06990 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I636_06995 SM00382 ATPases associated with a variety of cellular activities I636_07055 SM00857 Resolvase, N terminal domain I636_07085 SM00028 Tetratricopeptide repeats I636_07085 SM00387 Histidine kinase-like ATPases I636_07085 SM00388 His Kinase A (phosphoacceptor) domain I636_07085 SM00448 cheY-homologous receiver domain I636_07095 SM00859 Semialdehyde dehydrogenase, NAD binding domain I636_07110 SM00267 diguanylate cyclase I636_07135 SM00116 Domain in cystathionine beta-synthase and other proteins. I636_07175 SM00267 diguanylate cyclase I636_07245 SM00729 Elongator protein 3, MiaB family, Radical SAM I636_07245 SM00876 Biotin and Thiamin Synthesis associated domain I636_07270 SM00226 Low molecular weight phosphatase family I636_07280 SM00382 ATPases associated with a variety of cellular activities I636_07300 SM00382 ATPases associated with a variety of cellular activities I636_07305 SM00729 Elongator protein 3, MiaB family, Radical SAM I636_07315 SM00028 Tetratricopeptide repeats I636_07315 SM00448 cheY-homologous receiver domain I636_07360 SM00382 ATPases associated with a variety of cellular activities I636_07375 SM00905 Dihydroneopterin aldolase I636_07385 SM00387 Histidine kinase-like ATPases I636_07390 SM00448 cheY-homologous receiver domain I636_07390 SM00862 Transcriptional regulatory protein, C terminal I636_07460 SM00363 S4 RNA-binding domain I636_07470 SM01266 I636_07470 I636_07500 SM00382 ATPases associated with a variety of cellular activities I636_07565 SM00421 helix_turn_helix, Lux Regulon I636_07565 SM00448 cheY-homologous receiver domain I636_07570 SM00387 Histidine kinase-like ATPases I636_07570 SM00388 His Kinase A (phosphoacceptor) domain I636_07570 SM00448 cheY-homologous receiver domain I636_07585 SM00271 DnaJ molecular chaperone homology domain I636_07595 SM00052 Putative diguanylate phosphodiesterase I636_07595 SM00091 PAS domain I636_07595 SM00267 diguanylate cyclase I636_07615 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain I636_07620 SM00851 MGS-like domain I636_07620 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain I636_07670 SM00116 Domain in cystathionine beta-synthase and other proteins. I636_07670 SM01091 Transporter associated domain I636_07685 SM00729 Elongator protein 3, MiaB family, Radical SAM I636_07740 SM00903 Flavin reductase like domain I636_07780 SM00829 Enoylreductase I636_07795 SM01400 I636_07795 I636_07815 SM00937 I636_07815 I636_07865 SM00838 Elongation factor G C-terminus I636_07865 SM00889 Elongation factor G, domain IV I636_07870 SM01116 I636_07870 I636_07880 SM00219 Tyrosine kinase, catalytic domain I636_07880 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain I636_07890 SM00460 Transglutaminase/protease-like homologues I636_07920 SM00052 Putative diguanylate phosphodiesterase I636_07920 SM00267 diguanylate cyclase I636_07995 SM00347 helix_turn_helix multiple antibiotic resistance protein I636_08005 SM00864 Tubulin/FtsZ family, GTPase domain I636_08005 SM00865 Tubulin/FtsZ family, C-terminal domain I636_08015 SM00052 Putative diguanylate phosphodiesterase I636_08015 SM00091 PAS domain I636_08015 SM00267 diguanylate cyclase I636_08020 SM00052 Putative diguanylate phosphodiesterase I636_08020 SM00267 diguanylate cyclase I636_08030 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I636_08045 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I636_08045 SM00091 PAS domain I636_08045 SM00267 diguanylate cyclase I636_08075 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I636_08080 SM01092 CO dehydrogenase flavoprotein C-terminal domain I636_08120 SM00448 cheY-homologous receiver domain I636_08130 SM00267 diguanylate cyclase I636_08135 SM00387 Histidine kinase-like ATPases I636_08135 SM00388 His Kinase A (phosphoacceptor) domain I636_08135 SM00448 cheY-homologous receiver domain I636_08225 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I636_08295 SM00052 Putative diguanylate phosphodiesterase I636_08295 SM00267 diguanylate cyclase I636_08395 SM00873 B3/4 domain I636_08395 SM00874 tRNA synthetase B5 domain I636_08395 SM00896 Ferredoxin-fold anticodon binding domain I636_08400 SM00411 bacterial (prokaryotic) histone like domain I636_08435 SM00487 DEAD-like helicases superfamily I636_08435 SM00490 helicase superfamily c-terminal domain I636_08435 SM00982 I636_08435 I636_08435 SM01058 CarD-like/TRCF domain I636_08455 SM00387 Histidine kinase-like ATPases I636_08460 SM00897 FIST N domain I636_08460 SM01204 I636_08460 I636_08545 SM00878 Biotin carboxylase C-terminal domain I636_08565 SM00422 helix_turn_helix, mercury resistance I636_08585 SM00062 Bacterial periplasmic substrate-binding proteins I636_08585 SM00267 diguanylate cyclase I636_08600 SM00387 Histidine kinase-like ATPases I636_08600 SM00388 His Kinase A (phosphoacceptor) domain I636_08600 SM00448 cheY-homologous receiver domain I636_08610 SM00116 Domain in cystathionine beta-synthase and other proteins. I636_08635 SM00267 diguanylate cyclase I636_08640 SM00342 helix_turn_helix, arabinose operon control protein I636_08650 SM00382 ATPases associated with a variety of cellular activities I636_08650 SM00487 DEAD-like helicases superfamily I636_08650 SM00490 helicase superfamily c-terminal domain I636_08650 SM00847 Helicase associated domain (HA2) Add an annotation I636_08665 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I636_08670 SM00829 Enoylreductase I636_08680 SM00479 I636_08680 I636_08690 SM00052 Putative diguanylate phosphodiesterase I636_08695 SM00382 ATPases associated with a variety of cellular activities I636_08710 SM00634 Bacterial Ig-like domain (group 1) I636_08725 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain I636_08725 SM00437 Bacterial DNA topoisomerase I DNA-binding domain I636_08725 SM00493 I636_08725 I636_08765 SM00587 ZnF_C4 abd HLH domain containing kinases domain I636_08770 SM00316 Ribosomal protein S1-like RNA-binding domain I636_08775 SM00363 S4 RNA-binding domain I636_08810 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. I636_08815 SM00822 I636_08815 I636_08825 SM00825 Beta-ketoacyl synthase I636_08865 SM00267 diguanylate cyclase I636_08975 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I636_08975 SM00091 PAS domain I636_08975 SM00387 Histidine kinase-like ATPases I636_08975 SM00388 His Kinase A (phosphoacceptor) domain I636_08975 SM00448 cheY-homologous receiver domain I636_08980 SM00448 cheY-homologous receiver domain I636_08980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I636_08990 SM00316 Ribosomal protein S1-like RNA-binding domain I636_09015 SM01387 I636_09015 I636_09020 SM00363 S4 RNA-binding domain I636_09040 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I636_09050 SM00448 cheY-homologous receiver domain I636_09115 SM00729 Elongator protein 3, MiaB family, Radical SAM I636_09155 SM00382 ATPases associated with a variety of cellular activities I636_09185 SM00267 diguanylate cyclase I636_09205 SM00857 Resolvase, N terminal domain I636_09230 SM00347 helix_turn_helix multiple antibiotic resistance protein I636_09245 SM00028 Tetratricopeptide repeats I636_09270 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I636_09300 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. I636_09305 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain I636_09335 SM00357 Cold shock protein domain I636_09345 SM00382 ATPases associated with a variety of cellular activities I636_09345 SM01086 C-terminal, D2-small domain, of ClpB protein I636_09350 SM00316 Ribosomal protein S1-like RNA-binding domain I636_09375 SM00731 SprT homologues. I636_09405 SM00870 I636_09405 I636_09410 SM00729 Elongator protein 3, MiaB family, Radical SAM I636_09425 SM00936 Penicillin-binding protein 5, C-terminal domain I636_09495 SM00267 diguanylate cyclase I636_09505 SM01103 I636_09505 I636_09515 SM00382 ATPases associated with a variety of cellular activities I636_09540 SM00052 Putative diguanylate phosphodiesterase I636_09540 SM00267 diguanylate cyclase I636_09540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_09555 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I636_09560 SM00046 Diacylglycerol kinase catalytic domain (presumed) I636_09560 SM00195 Dual specificity phosphatase, catalytic domain I636_09560 SM00404 Protein tyrosine phosphatase, catalytic domain motif I636_09635 SM00507 HNH nucleases I636_09640 SM00316 Ribosomal protein S1-like RNA-binding domain I636_09640 SM00322 K homology RNA-binding domain I636_09770 SM00028 Tetratricopeptide repeats I636_09790 SM00771 ZipA, C-terminal domain (FtsZ-binding) I636_09795 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I636_09795 SM00292 breast cancer carboxy-terminal domain I636_09795 SM00532 Ligase N family I636_09805 SM00849 Metallo-beta-lactamase superfamily I636_09810 SM00382 ATPases associated with a variety of cellular activities I636_09835 SM00729 Elongator protein 3, MiaB family, Radical SAM I636_09900 SM00861 Transketolase, pyrimidine binding domain I636_09915 SM00881 CoA binding domain I636_09955 SM00642 Alpha-amylase domain I636_09960 SM00642 Alpha-amylase domain I636_09970 SM00642 Alpha-amylase domain I636_09975 SM00354 helix_turn _helix lactose operon repressor I636_10095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I636_10110 SM00387 Histidine kinase-like ATPases I636_10115 SM00448 cheY-homologous receiver domain I636_10115 SM00850 LytTr DNA-binding domain I636_10135 SM00450 Rhodanese Homology Domain I636_10135 SM00849 Metallo-beta-lactamase superfamily I636_10150 SM00028 Tetratricopeptide repeats I636_10150 SM00448 cheY-homologous receiver domain I636_10160 SM00450 Rhodanese Homology Domain I636_10165 SM00054 EF-hand, calcium binding motif I636_10170 SM00487 DEAD-like helicases superfamily I636_10170 SM00490 helicase superfamily c-terminal domain I636_10175 SM00882 Coenzyme A transferase I636_10180 SM00882 Coenzyme A transferase I636_10195 SM00387 Histidine kinase-like ATPases I636_10245 SM00861 Transketolase, pyrimidine binding domain I636_10260 SM00220 Serine/Threonine protein kinases, catalytic domain I636_10295 SM00945 ProQ/FINO family I636_10300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I636_10300 SM00245 tail specific protease I636_10355 SM00981 I636_10355 I636_10365 SM00382 ATPases associated with a variety of cellular activities I636_10480 SM00100 Cyclic nucleotide-monophosphate binding domain I636_10480 SM00419 helix_turn_helix, cAMP Regulatory protein I636_10505 SM00047 Lysozyme subfamily 2 I636_10525 SM00450 Rhodanese Homology Domain I636_10535 SM01144 I636_10535 I636_10545 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I636_10545 SM00465 GIY-YIG type nucleases (URI domain) I636_10550 SM00421 helix_turn_helix, Lux Regulon I636_10550 SM00448 cheY-homologous receiver domain I636_10640 SM00382 ATPases associated with a variety of cellular activities I636_10650 SM00843 I636_10650 I636_10655 SM00344 helix_turn_helix ASNC type I636_10660 SM01002 Alanine dehydrogenase/PNT, C-terminal domain I636_10660 SM01003 Alanine dehydrogenase/PNT, N-terminal domain I636_10665 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family I636_10685 SM00411 bacterial (prokaryotic) histone like domain I636_10690 SM00316 Ribosomal protein S1-like RNA-binding domain I636_10710 SM00434 DNA Topoisomerase IV I636_10745 SM00052 Putative diguanylate phosphodiesterase I636_10745 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I636_10745 SM00267 diguanylate cyclase I636_10765 SM01130 I636_10765 I636_10845 SM00421 helix_turn_helix, Lux Regulon I636_10845 SM00448 cheY-homologous receiver domain I636_10875 SM00642 Alpha-amylase domain I636_10885 SM00852 Probable molybdopterin binding domain I636_10905 SM00382 ATPases associated with a variety of cellular activities I636_10970 SM00530 Helix-turn-helix XRE-family like proteins I636_11040 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. I636_11050 SM00563 Phosphate acyltransferases I636_11090 SM00342 helix_turn_helix, arabinose operon control protein I636_11125 SM00893 Electron transfer flavoprotein domain I636_11130 SM00893 Electron transfer flavoprotein domain I636_11140 SM00528 Domain in histone-like proteins of HNS family I636_11160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_11160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_11175 SM00797 Allophanate hydrolase subunit 2 I636_11180 SM00796 Allophanate hydrolase subunit 1 I636_11235 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I636_11280 SM00342 helix_turn_helix, arabinose operon control protein I636_11295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I636_11325 SM00829 Enoylreductase I636_11340 SM00855 Phosphoglycerate mutase family I636_11365 SM00729 Elongator protein 3, MiaB family, Radical SAM I636_11370 SM00382 ATPases associated with a variety of cellular activities I636_11400 SM00852 Probable molybdopterin binding domain I636_11525 SM00052 Putative diguanylate phosphodiesterase I636_11525 SM00267 diguanylate cyclase I636_11530 SM00849 Metallo-beta-lactamase superfamily I636_11565 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I636_11570 SM00450 Rhodanese Homology Domain I636_11585 SM00382 ATPases associated with a variety of cellular activities I636_11585 SM00448 cheY-homologous receiver domain I636_11595 SM00387 Histidine kinase-like ATPases I636_11595 SM00388 His Kinase A (phosphoacceptor) domain I636_11600 SM00448 cheY-homologous receiver domain I636_11605 SM00387 Histidine kinase-like ATPases I636_11605 SM00388 His Kinase A (phosphoacceptor) domain I636_11605 SM00448 cheY-homologous receiver domain I636_11675 SM00631 I636_11675 I636_11680 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I636_11695 SM01350 I636_11695 I636_11700 SM00642 Alpha-amylase domain I636_11705 SM00642 Alpha-amylase domain I636_11715 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I636_11765 SM00342 helix_turn_helix, arabinose operon control protein I636_11775 SM00893 Electron transfer flavoprotein domain I636_11780 SM00893 Electron transfer flavoprotein domain I636_11855 SM00749 bacterial OsmY and nodulation domain I636_11930 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_11930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_11955 SM00052 Putative diguanylate phosphodiesterase I636_11955 SM00267 diguanylate cyclase I636_11965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I636_11970 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I636_11970 SM00387 Histidine kinase-like ATPases I636_12130 SM00849 Metallo-beta-lactamase superfamily I636_12135 SM00257 Lysin motif I636_12160 SM00840 I636_12160 I636_12180 SM00244 prohibitin homologues I636_12190 SM00642 Alpha-amylase domain I636_12200 SM00829 Enoylreductase I636_12205 SM01060 I636_12205 I636_12210 SM00829 Enoylreductase I636_12225 SM00539 Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins. I636_12285 SM00859 Semialdehyde dehydrogenase, NAD binding domain I636_12295 SM01007 Class II Aldolase and Adducin N-terminal domain I636_12300 SM00100 Cyclic nucleotide-monophosphate binding domain I636_12300 SM00419 helix_turn_helix, cAMP Regulatory protein I636_12320 SM00825 Beta-ketoacyl synthase I636_12370 SM00422 helix_turn_helix, mercury resistance I636_12375 SM00829 Enoylreductase I636_12405 SM00382 ATPases associated with a variety of cellular activities I636_12415 SM00387 Histidine kinase-like ATPases I636_12415 SM00388 His Kinase A (phosphoacceptor) domain I636_12415 SM00448 cheY-homologous receiver domain I636_12535 SM00345 helix_turn_helix gluconate operon transcriptional repressor I636_12580 SM00341 Helicase and RNase D C-terminal I636_12610 SM00487 DEAD-like helicases superfamily I636_12610 SM00488 I636_12610 I636_12610 SM00491 I636_12610 I636_12620 SM00014 Acid phosphatase homologues I636_12635 SM00642 Alpha-amylase domain I636_12760 SM00387 Histidine kinase-like ATPases I636_12765 SM00493 I636_12765 I636_12775 SM00448 cheY-homologous receiver domain I636_12815 SM00862 Transcriptional regulatory protein, C terminal I636_12825 SM00091 PAS domain I636_12825 SM00267 diguanylate cyclase I636_12845 SM00028 Tetratricopeptide repeats I636_12855 SM00382 ATPases associated with a variety of cellular activities I636_12855 SM01086 C-terminal, D2-small domain, of ClpB protein I636_12865 SM00363 S4 RNA-binding domain I636_12935 SM00861 Transketolase, pyrimidine binding domain I636_12990 SM00382 ATPases associated with a variety of cellular activities I636_13000 SM00382 ATPases associated with a variety of cellular activities I636_13035 SM00358 Double-stranded RNA binding motif I636_13035 SM00535 Ribonuclease III family I636_13045 SM00838 Elongation factor G C-terminus I636_13105 SM00938 Nitrogen regulatory protein P-II I636_13190 SM00904 Riboflavin kinase I636_13235 SM00563 Phosphate acyltransferases I636_13255 SM00411 bacterial (prokaryotic) histone like domain I636_13265 SM00382 ATPases associated with a variety of cellular activities I636_13265 SM00464 Found in ATP-dependent protease La (LON) I636_13270 SM00382 ATPases associated with a variety of cellular activities I636_13270 SM00994 ClpX C4-type zinc finger I636_13270 SM01086 C-terminal, D2-small domain, of ClpB protein I636_13305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_13315 SM00116 Domain in cystathionine beta-synthase and other proteins. I636_13315 SM01240 I636_13315 I636_13335 SM00382 ATPases associated with a variety of cellular activities I636_13340 SM00564 beta-propeller repeat I636_13345 SM00028 Tetratricopeptide repeats I636_13365 SM00028 Tetratricopeptide repeats I636_13365 SM00257 Lysin motif I636_13375 SM00562 I636_13375 I636_13405 SM00382 ATPases associated with a variety of cellular activities I636_13450 SM00850 LytTr DNA-binding domain I636_13465 SM01323 I636_13465 I636_13530 SM00382 ATPases associated with a variety of cellular activities I636_13550 SM00098 Alkaline phosphatase homologues I636_13555 SM00260 Two component signalling adaptor domain I636_13555 SM00448 cheY-homologous receiver domain I636_13620 SM00028 Tetratricopeptide repeats I636_13645 SM00984 UDP binding domain I636_13775 SM00382 ATPases associated with a variety of cellular activities I636_13860 SM00052 Putative diguanylate phosphodiesterase I636_13860 SM00267 diguanylate cyclase I636_13875 SM00354 helix_turn _helix lactose operon repressor I636_13915 SM00967 RNA 2'-O ribose methyltransferase substrate binding I636_13990 SM00953 I636_13990 I636_14010 SM00448 cheY-homologous receiver domain I636_14010 SM00862 Transcriptional regulatory protein, C terminal I636_14015 SM00387 Histidine kinase-like ATPases I636_14015 SM00388 His Kinase A (phosphoacceptor) domain I636_14060 SM01092 CO dehydrogenase flavoprotein C-terminal domain I636_14065 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I636_14110 SM01322 I636_14110 I636_14155 SM00487 DEAD-like helicases superfamily I636_14155 SM00490 helicase superfamily c-terminal domain I636_14175 SM00028 Tetratricopeptide repeats I636_14175 SM00387 Histidine kinase-like ATPases I636_14175 SM00388 His Kinase A (phosphoacceptor) domain I636_14175 SM00448 cheY-homologous receiver domain I636_14185 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I636_14185 SM00387 Histidine kinase-like ATPases I636_14185 SM00388 His Kinase A (phosphoacceptor) domain I636_14185 SM00448 cheY-homologous receiver domain I636_14205 SM00448 cheY-homologous receiver domain I636_14205 SM00862 Transcriptional regulatory protein, C terminal I636_14210 SM00388 His Kinase A (phosphoacceptor) domain I636_14220 SM00530 Helix-turn-helix XRE-family like proteins I636_14230 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I636_14240 SM00244 prohibitin homologues I636_14260 SM00382 ATPases associated with a variety of cellular activities I636_14270 SM00696 Repeats found in Drosophila proteins. I636_14300 SM00422 helix_turn_helix, mercury resistance I636_14310 SM00342 helix_turn_helix, arabinose operon control protein I636_14375 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I636_14410 SM00345 helix_turn_helix gluconate operon transcriptional repressor I636_14410 SM00895 I636_14410 I636_14420 SM00644 I636_14420 I636_14475 SM00957 SecA DEAD-like domain I636_14475 SM00958 SecA preprotein cross-linking domain I636_14490 SM00864 Tubulin/FtsZ family, GTPase domain I636_14490 SM00865 Tubulin/FtsZ family, C-terminal domain I636_14495 SM00842 Cell division protein FtsA I636_14625 SM00028 Tetratricopeptide repeats I636_14625 SM00267 diguanylate cyclase I636_14635 SM00382 ATPases associated with a variety of cellular activities I636_14635 SM00448 cheY-homologous receiver domain I636_14640 SM00387 Histidine kinase-like ATPases I636_14690 SM00732 Likely ribonuclease with RNase H fold. I636_14700 SM00382 ATPases associated with a variety of cellular activities I636_14780 SM00530 Helix-turn-helix XRE-family like proteins I636_14790 SM00360 RNA recognition motif I636_14805 SM00986 Uracil DNA glycosylase superfamily I636_14805 SM00987 UreE urease accessory protein, C-terminal domain I636_14825 SM00382 ATPases associated with a variety of cellular activities I636_14835 SM00829 Enoylreductase I636_14845 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I636_14850 SM00226 Low molecular weight phosphatase family I636_14865 SM00448 cheY-homologous receiver domain I636_14875 SM00448 cheY-homologous receiver domain I636_14875 SM00862 Transcriptional regulatory protein, C terminal I636_14880 SM00387 Histidine kinase-like ATPases I636_14880 SM00388 His Kinase A (phosphoacceptor) domain I636_14975 SM00749 bacterial OsmY and nodulation domain I636_15000 SM00421 helix_turn_helix, Lux Regulon I636_15000 SM00448 cheY-homologous receiver domain I636_15020 SM00345 helix_turn_helix gluconate operon transcriptional repressor I636_15020 SM00895 I636_15020 I636_15045 SM00267 diguanylate cyclase I636_15045 SM00448 cheY-homologous receiver domain I636_15090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I636_15090 SM00091 PAS domain I636_15090 SM00387 Histidine kinase-like ATPases I636_15090 SM00388 His Kinase A (phosphoacceptor) domain I636_15090 SM00448 cheY-homologous receiver domain I636_15095 SM00287 Bacterial SH3 domain homologues I636_15095 SM00644 I636_15095 I636_15135 SM00450 Rhodanese Homology Domain I636_15225 SM00448 cheY-homologous receiver domain I636_15240 SM01230 I636_15240 I636_15250 SM00091 PAS domain I636_15250 SM00387 Histidine kinase-like ATPases I636_15250 SM00388 His Kinase A (phosphoacceptor) domain I636_15255 SM00382 ATPases associated with a variety of cellular activities I636_15255 SM00448 cheY-homologous receiver domain I636_15260 SM00073 Histidine Phosphotransfer domain I636_15265 SM00563 Phosphate acyltransferases I636_15295 SM00244 prohibitin homologues I636_15305 SM00387 Histidine kinase-like ATPases I636_15305 SM00388 His Kinase A (phosphoacceptor) domain I636_15305 SM00448 cheY-homologous receiver domain I636_15305 SM01358 I636_15305 I636_15405 SM00382 ATPases associated with a variety of cellular activities I636_15425 SM00530 Helix-turn-helix XRE-family like proteins I636_15510 SM00028 Tetratricopeptide repeats I636_15530 SM00345 helix_turn_helix gluconate operon transcriptional repressor I636_15530 SM00895 I636_15530 I636_15550 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I636_15570 SM00267 diguanylate cyclase I636_15600 SM00387 Histidine kinase-like ATPases I636_15600 SM00448 cheY-homologous receiver domain I636_15610 SM00886 Stress responsive A/B Barrel Domain I636_15620 SM00382 ATPases associated with a variety of cellular activities I636_15690 SM00849 Metallo-beta-lactamase superfamily I636_15690 SM01027 Beta-Casp domain I636_15705 SM00996 S-adenosyl-L-homocysteine hydrolase I636_15705 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain I636_15730 SM00564 beta-propeller repeat I636_15735 SM00062 Bacterial periplasmic substrate-binding proteins I636_15750 SM00382 ATPases associated with a variety of cellular activities I636_15780 SM00729 Elongator protein 3, MiaB family, Radical SAM I636_15805 SM00421 helix_turn_helix, Lux Regulon I636_15805 SM00448 cheY-homologous receiver domain I636_15810 SM00091 PAS domain I636_15810 SM00387 Histidine kinase-like ATPases I636_15810 SM00388 His Kinase A (phosphoacceptor) domain I636_15810 SM00448 cheY-homologous receiver domain I636_15815 SM00897 FIST N domain I636_15815 SM01204 I636_15815 I636_15820 SM00900 I636_15820 I636_15830 SM00421 helix_turn_helix, Lux Regulon I636_15830 SM00448 cheY-homologous receiver domain I636_15870 SM00965 Secretin and TonB N terminus short domain I636_15895 SM00421 helix_turn_helix, Lux Regulon I636_15925 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins I636_15930 SM00421 helix_turn_helix, Lux Regulon I636_15930 SM00448 cheY-homologous receiver domain I636_15945 SM00487 DEAD-like helicases superfamily I636_15945 SM00490 helicase superfamily c-terminal domain I636_15995 SM00267 diguanylate cyclase I636_16045 SM00966 SpoVT / AbrB like domain I636_16105 SM00345 helix_turn_helix gluconate operon transcriptional repressor I636_16105 SM00895 I636_16105 I636_16170 SM00986 Uracil DNA glycosylase superfamily I636_16170 SM00987 UreE urease accessory protein, C-terminal domain I636_16175 SM00052 Putative diguanylate phosphodiesterase I636_16175 SM00267 diguanylate cyclase I636_16175 SM00448 cheY-homologous receiver domain I636_16260 SM00173 Ras subfamily of RAS small GTPases I636_16260 SM00175 Rab subfamily of small GTPases I636_16265 SM00052 Putative diguanylate phosphodiesterase I636_16265 SM00267 diguanylate cyclase I636_16275 SM00563 Phosphate acyltransferases I636_16280 SM00563 Phosphate acyltransferases I636_16410 SM00052 Putative diguanylate phosphodiesterase I636_16435 SM00849 Metallo-beta-lactamase superfamily I636_16470 SM00530 Helix-turn-helix XRE-family like proteins I636_16490 SM00903 Flavin reductase like domain I636_16525 SM00100 Cyclic nucleotide-monophosphate binding domain I636_16540 SM00849 Metallo-beta-lactamase superfamily I636_16580 SM00900 I636_16580 I636_16670 SM00028 Tetratricopeptide repeats I636_16680 SM00267 diguanylate cyclase I636_16680 SM00448 cheY-homologous receiver domain I636_16685 SM00479 I636_16685 I636_16690 SM00116 Domain in cystathionine beta-synthase and other proteins. I636_16705 SM00387 Histidine kinase-like ATPases I636_16705 SM00388 His Kinase A (phosphoacceptor) domain I636_16705 SM00448 cheY-homologous receiver domain I636_16735 SM00421 helix_turn_helix, Lux Regulon I636_16735 SM00448 cheY-homologous receiver domain I636_16760 SM01358 I636_16760 I636_16770 SM00052 Putative diguanylate phosphodiesterase I636_16770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I636_16770 SM00091 PAS domain I636_16770 SM00267 diguanylate cyclase I636_16800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_16845 SM00984 UDP binding domain I636_17090 SM00662 RNA polymerases D I636_17095 SM00363 S4 RNA-binding domain I636_17095 SM01390 I636_17095 I636_17160 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I636_17165 SM01374 I636_17165 I636_17170 SM00387 Histidine kinase-like ATPases I636_17170 SM00388 His Kinase A (phosphoacceptor) domain I636_17170 SM00448 cheY-homologous receiver domain I636_17190 SM00967 RNA 2'-O ribose methyltransferase substrate binding I636_17195 SM00316 Ribosomal protein S1-like RNA-binding domain I636_17195 SM00357 Cold shock protein domain I636_17195 SM00955 I636_17195 I636_17240 SM00671 Sel1-like repeats. I636_17280 SM00387 Histidine kinase-like ATPases I636_17280 SM00388 His Kinase A (phosphoacceptor) domain I636_17280 SM00448 cheY-homologous receiver domain I636_17305 SM00344 helix_turn_helix ASNC type I636_17315 SM00357 Cold shock protein domain I636_17345 SM00448 cheY-homologous receiver domain I636_17355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_17355 SM00387 Histidine kinase-like ATPases I636_17355 SM00388 His Kinase A (phosphoacceptor) domain I636_17360 SM00448 cheY-homologous receiver domain I636_17370 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I636_17430 SM00382 ATPases associated with a variety of cellular activities I636_17435 SM00421 helix_turn_helix, Lux Regulon I636_17460 SM00382 ATPases associated with a variety of cellular activities I636_17460 SM01086 C-terminal, D2-small domain, of ClpB protein I636_17475 SM00487 DEAD-like helicases superfamily I636_17475 SM00490 helicase superfamily c-terminal domain I636_17490 SM00919 Malic enzyme, NAD binding domain I636_17490 SM01274 I636_17490 I636_17540 SM00052 Putative diguanylate phosphodiesterase I636_17555 SM00382 ATPases associated with a variety of cellular activities I636_17560 SM00382 ATPases associated with a variety of cellular activities I636_17560 SM00962 SRP54-type protein, GTPase domain I636_17630 SM00382 ATPases associated with a variety of cellular activities I636_17635 SM00448 cheY-homologous receiver domain I636_17635 SM00862 Transcriptional regulatory protein, C terminal I636_17640 SM00387 Histidine kinase-like ATPases I636_17640 SM00388 His Kinase A (phosphoacceptor) domain I636_17650 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I636_17665 SM00116 Domain in cystathionine beta-synthase and other proteins. I636_17695 SM00838 Elongation factor G C-terminus I636_17695 SM00889 Elongation factor G, domain IV I636_17710 SM00663 RNA polymerase I subunit A N-terminus I636_17735 SM00649 Ribosomal protein L11/L12 I636_17755 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. I636_17755 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I636_17765 SM00382 ATPases associated with a variety of cellular activities I636_17785 SM00487 DEAD-like helicases superfamily I636_17785 SM00490 helicase superfamily c-terminal domain I636_17820 SM00642 Alpha-amylase domain I636_17860 SM00487 DEAD-like helicases superfamily I636_17860 SM00490 helicase superfamily c-terminal domain I636_17865 SM00849 Metallo-beta-lactamase superfamily I636_17875 SM00841 Elongation factor P, C-terminal I636_17875 SM01185 I636_17875 I636_17915 SM00244 prohibitin homologues I636_17920 SM00244 prohibitin homologues I636_17940 SM01340 I636_17940 I636_17945 SM00257 Lysin motif I636_17945 SM00646 I636_17945 I636_18005 SM00382 ATPases associated with a variety of cellular activities I636_18040 SM00849 Metallo-beta-lactamase superfamily I636_18060 SM00387 Histidine kinase-like ATPases I636_18060 SM00388 His Kinase A (phosphoacceptor) domain I636_18070 SM00382 ATPases associated with a variety of cellular activities I636_18080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_18085 SM00387 Histidine kinase-like ATPases I636_18090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I636_18140 SM00354 helix_turn _helix lactose operon repressor I636_18160 SM00267 diguanylate cyclase I636_18215 SM00116 Domain in cystathionine beta-synthase and other proteins. I636_18230 SM00867 YceI-like domain I636_18260 SM00829 Enoylreductase I636_18265 SM00267 diguanylate cyclase I636_18270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_18270 SM00387 Histidine kinase-like ATPases I636_18270 SM00388 His Kinase A (phosphoacceptor) domain I636_18270 SM00448 cheY-homologous receiver domain I636_18290 SM00420 helix_turn_helix, Deoxyribose operon repressor I636_18290 SM01134 I636_18290 I636_18305 SM00267 diguanylate cyclase I636_18320 SM00342 helix_turn_helix, arabinose operon control protein I636_18320 SM01009 AlkA N-terminal domain I636_18350 SM01002 Alanine dehydrogenase/PNT, C-terminal domain I636_18350 SM01003 Alanine dehydrogenase/PNT, N-terminal domain I636_18400 SM00965 Secretin and TonB N terminus short domain I636_18460 SM00670 Large family of predicted nucleotide-binding domains I636_18485 SM00883 Chaperonin 10 Kd subunit I636_18520 SM00878 Biotin carboxylase C-terminal domain I636_18540 SM00479 I636_18540 I636_18540 SM00990 I636_18540 I636_18570 SM00062 Bacterial periplasmic substrate-binding proteins I636_18590 SM00798 AICARFT/IMPCHase bienzyme I636_18590 SM00851 MGS-like domain I636_18600 SM01209 I636_18600 I636_18600 SM01210 I636_18600 I636_18605 SM00047 Lysozyme subfamily 2 I636_18630 SM00448 cheY-homologous receiver domain I636_18630 SM00862 Transcriptional regulatory protein, C terminal I636_18640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I636_18640 SM00387 Histidine kinase-like ATPases I636_18640 SM00388 His Kinase A (phosphoacceptor) domain I636_18665 SM00363 S4 RNA-binding domain I636_18680 SM00382 ATPases associated with a variety of cellular activities I636_18760 SM00867 YceI-like domain I636_18795 SM00382 ATPases associated with a variety of cellular activities I636_18820 SM00320 WD40 repeats I636_18840 SM00316 Ribosomal protein S1-like RNA-binding domain I636_18840 SM00732 Likely ribonuclease with RNase H fold. I636_18850 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. I636_18875 SM00342 helix_turn_helix, arabinose operon control protein I636_18895 SM00633 Glycosyl hydrolase family 10 I636_18905 SM00861 Transketolase, pyrimidine binding domain I636_18945 SM00710 Parallel beta-helix repeats I636_18955 SM00813 Alpha-L-arabinofuranosidase C-terminus I636_18990 SM00631 I636_18990 I636_19085 SM00563 Phosphate acyltransferases I636_19105 SM00382 ATPases associated with a variety of cellular activities I636_19170 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I636_19275 SM00530 Helix-turn-helix XRE-family like proteins I636_19285 SM00530 Helix-turn-helix XRE-family like proteins I636_19290 SM00487 DEAD-like helicases superfamily I636_19300 SM00487 DEAD-like helicases superfamily I636_19300 SM00490 helicase superfamily c-terminal domain I636_19315 SM00487 DEAD-like helicases superfamily I636_19385 SM00327 von Willebrand factor (vWF) type A domain I636_19390 SM00327 von Willebrand factor (vWF) type A domain I636_19445 SM00342 helix_turn_helix, arabinose operon control protein I636_19455 SM00422 helix_turn_helix, mercury resistance I636_19485 SM00354 helix_turn _helix lactose operon repressor I636_19500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I636_19510 SM01144 I636_19510 I636_19530 SM00382 ATPases associated with a variety of cellular activities I636_19570 SM00470 ParB-like nuclease domain I636_19585 SM01228 I636_19585 I636_19620 SM01234 I636_19620