locus-tag class description I635_00005 PF11638 DnaA N-terminal domain I635_00005 PF00308 Bacterial dnaA protein I635_00005 PF08299 Bacterial dnaA protein helix-turn-helix I635_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain I635_00010 PF02767 DNA polymerase III beta subunit, central domain I635_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain I635_00015 PF02463 RecF/RecN/SMC N terminal domain I635_00020 PF00986 DNA gyrase B subunit, carboxyl terminus I635_00020 PF18053 DNA gyrase B subunit insert domain I635_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_00020 PF01751 Toprim domain I635_00020 PF00204 DNA gyrase B I635_00030 PF05746 DALR anticodon binding domain I635_00030 PF02092 Glycyl-tRNA synthetase beta subunit I635_00035 PF02091 Glycyl-tRNA synthetase alpha subunit I635_00040 PF03352 Methyladenine glycosylase I635_00050 PF04220 Der GTPase activator (YihI) I635_00060 PF00034 Cytochrome c I635_00065 PF01926 50S ribosome-binding GTPase I635_00070 PF01367 5'-3' exonuclease, C-terminal SAM fold I635_00070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain I635_00070 PF01612 3'-5' exonuclease I635_00070 PF00476 DNA polymerase family A I635_00080 PF02386 Cation transport protein I635_00085 PF02254 TrkA-N domain I635_00085 PF02080 TrkA-C domain I635_00090 PF01029 NusB family I635_00090 PF01189 16S rRNA methyltransferase RsmB/F I635_00095 PF02911 Formyl transferase, C-terminal domain I635_00095 PF00551 Formyl transferase I635_00100 PF01327 Polypeptide deformylase I635_00110 PF17782 DprA winged helix domain I635_00110 PF02481 DNA recombination-mediator protein A I635_00115 PF04361 Protein of unknown function (DUF494) I635_00125 PF01300 Telomere recombination I635_00130 PF01218 Coproporphyrinogen III oxidase I635_00135 PF03922 OmpW family I635_00145 PF01488 Shikimate / quinate 5-dehydrogenase I635_00145 PF18317 Shikimate 5'-dehydrogenase C-terminal domain I635_00145 PF08501 Shikimate dehydrogenase substrate binding domain I635_00150 PF00132 Bacterial transferase hexapeptide (six repeats) I635_00180 PF07733 Bacterial DNA polymerase III alpha NTPase domain I635_00180 PF14579 Helix-hairpin-helix motif I635_00180 PF02811 PHP domain I635_00180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain I635_00180 PF01336 OB-fold nucleic acid binding domain I635_00210 PF02225 PA domain I635_00210 PF04389 Peptidase family M28 I635_00215 PF00535 Glycosyl transferase family 2 I635_00220 PF00440 Bacterial regulatory proteins, tetR family I635_00225 PF04127 DNA / pantothenate metabolism flavoprotein I635_00225 PF02441 Flavoprotein I635_00230 PF04002 RadC-like JAB domain I635_00250 PF06082 Exopolysaccharide biosynthesis protein YbjH I635_00255 PF00830 Ribosomal L28 family I635_00260 PF00471 Ribosomal protein L33 I635_00270 PF06827 Zinc finger found in FPG and IleRS I635_00270 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain I635_00270 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain I635_00275 PF01467 Cytidylyltransferase-like I635_00285 PF01075 Glycosyltransferase family 9 (heptosyltransferase) I635_00300 PF00563 EAL domain I635_00300 PF00990 Diguanylate cyclase, GGDEF domain I635_00300 PF03707 Bacterial signalling protein N terminal repeat I635_00305 PF00155 Aminotransferase class I and II I635_00310 PF08240 Alcohol dehydrogenase GroES-like domain I635_00310 PF00107 Zinc-binding dehydrogenase I635_00315 PF00581 Rhodanese-like domain I635_00320 PF01694 Rhomboid family I635_00320 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease I635_00330 PF04345 Chorismate lyase I635_00335 PF01040 UbiA prenyltransferase family I635_00350 PF04380 Membrane fusogenic activity I635_00355 PF13361 UvrD-like helicase C-terminal domain I635_00355 PF00580 UvrD/REP helicase N-terminal domain I635_00360 PF00563 EAL domain I635_00360 PF00990 Diguanylate cyclase, GGDEF domain I635_00360 PF03707 Bacterial signalling protein N terminal repeat I635_00365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III I635_00395 PF04143 Sulphur transport I635_00400 PF02082 Transcriptional regulator I635_00405 PF01925 Sulfite exporter TauE/SafE I635_00410 PF00753 Metallo-beta-lactamase superfamily I635_00420 PF00593 TonB dependent receptor I635_00420 PF07715 TonB-dependent Receptor Plug Domain I635_00435 PF00005 ABC transporter I635_00435 PF00664 ABC transporter transmembrane region I635_00440 PF00664 ABC transporter transmembrane region I635_00440 PF00005 ABC transporter I635_00450 PF01654 Cytochrome bd terminal oxidase subunit I I635_00460 PF01206 Sulfurtransferase TusA I635_00460 PF00581 Rhodanese-like domain I635_00465 PF00753 Metallo-beta-lactamase superfamily I635_00470 PF10417 C-terminal domain of 1-Cys peroxiredoxin I635_00470 PF00578 AhpC/TSA family I635_00480 PF00578 AhpC/TSA family I635_00500 PF00873 AcrB/AcrD/AcrF family I635_00510 PF02028 BCCT, betaine/carnitine/choline family transporter I635_00555 PF00145 C-5 cytosine-specific DNA methylase I635_00560 PF00271 Helicase conserved C-terminal domain I635_00560 PF17757 UvrB interaction domain I635_00560 PF12344 Ultra-violet resistance protein B I635_00560 PF02151 UvrB/uvrC motif I635_00560 PF04851 Type III restriction enzyme, res subunit I635_00570 PF13533 Biotin-lipoyl like I635_00575 PF00005 ABC transporter I635_00585 PF07715 TonB-dependent Receptor Plug Domain I635_00585 PF00593 TonB dependent receptor I635_00595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I635_00595 PF02770 Acyl-CoA dehydrogenase, middle domain I635_00595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_00600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_00600 PF03466 LysR substrate binding domain I635_00605 PF00753 Metallo-beta-lactamase superfamily I635_00610 PF04317 YcjX-like family, DUF463 I635_00630 PF02661 Fic/DOC family I635_00635 PF06968 Biotin and Thiamin Synthesis associated domain I635_00635 PF04055 Radical SAM superfamily I635_00640 PF05690 Thiazole biosynthesis protein ThiG I635_00650 PF00899 ThiF family I635_00655 PF02581 Thiamine monophosphate synthase I635_00660 PF01964 Radical SAM ThiC family I635_00660 PF13667 ThiC-associated domain I635_00665 PF07219 HemY protein N-terminus I635_00665 PF07719 Tetratricopeptide repeat I635_00670 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase I635_00675 PF02602 Uroporphyrinogen-III synthase HemD I635_00680 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain I635_00680 PF03900 Porphobilinogen deaminase, C-terminal domain I635_00685 PF00990 Diguanylate cyclase, GGDEF domain I635_00685 PF17151 Periplasmic sensor domain I635_00700 PF00625 Guanylate kinase I635_00705 PF01192 RNA polymerase Rpb6 I635_00710 PF02824 TGS domain I635_00710 PF04607 Region found in RelA / SpoT proteins I635_00710 PF13291 ACT domain I635_00715 PF01042 Endoribonuclease L-PSP I635_00720 PF00588 SpoU rRNA Methylase family I635_00720 PF12105 SpoU, rRNA methylase, C-terminal I635_00725 PF00270 DEAD/DEAH box helicase I635_00725 PF17191 RecG wedge domain I635_00725 PF00271 Helicase conserved C-terminal domain I635_00730 PF04445 Putative SAM-dependent methyltransferase I635_00735 PF08534 Redoxin I635_00755 PF00528 Binding-protein-dependent transport system inner membrane component I635_00760 PF08402 TOBE domain I635_00760 PF00005 ABC transporter I635_00765 PF00924 Mechanosensitive ion channel I635_00765 PF05552 Conserved TM helix I635_00780 PF13683 Integrase core domain I635_00790 PF01527 Transposase I635_00800 PF00873 AcrB/AcrD/AcrF family I635_00805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I635_00805 PF00529 HlyD membrane-fusion protein of T1SS I635_00825 PF13411 MerR HTH family regulatory protein I635_00830 PF01527 Transposase I635_00835 PF13276 HTH-like domain I635_00835 PF13333 Integrase core domain I635_00835 PF00665 Integrase core domain I635_00850 PF00563 EAL domain I635_00850 PF04940 Sensors of blue-light using FAD I635_00855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_00855 PF03466 LysR substrate binding domain I635_00860 PF01810 LysE type translocator I635_00865 PF00893 Small Multidrug Resistance protein I635_00880 PF00529 HlyD membrane-fusion protein of T1SS I635_00880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I635_00885 PF00873 AcrB/AcrD/AcrF family I635_00895 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain I635_00895 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain I635_00900 PF00850 Histone deacetylase domain I635_00915 PF12729 Four helix bundle sensory module for signal transduction I635_00915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_00915 PF00672 HAMP domain I635_00925 PF11737 Protein of unknown function (DUF3300) I635_00930 PF00925 GTP cyclohydrolase II I635_00935 PF08448 PAS fold I635_00935 PF00990 Diguanylate cyclase, GGDEF domain I635_00935 PF00563 EAL domain I635_00950 PF00271 Helicase conserved C-terminal domain I635_00950 PF00270 DEAD/DEAH box helicase I635_00950 PF16124 RecQ zinc-binding I635_00950 PF00570 HRDC domain I635_00950 PF09382 RQC domain I635_00955 PF03448 MgtE intracellular N domain I635_00955 PF01769 Divalent cation transporter I635_00955 PF00571 CBS domain I635_00960 PF00892 EamA-like transporter family I635_00965 PF00990 Diguanylate cyclase, GGDEF domain I635_00965 PF00072 Response regulator receiver domain I635_00970 PF00580 UvrD/REP helicase N-terminal domain I635_00970 PF13361 UvrD-like helicase C-terminal domain I635_00975 PF06426 Serine acetyltransferase, N-terminal I635_00975 PF00132 Bacterial transferase hexapeptide (six repeats) I635_00980 PF13419 Haloacid dehalogenase-like hydrolase I635_00995 PF01678 Diaminopimelate epimerase I635_01000 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain I635_01000 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain I635_01015 PF01569 PAP2 superfamily I635_01020 PF03737 Aldolase/RraA I635_01030 PF02441 Flavoprotein I635_01035 PF02875 Mur ligase family, glutamate ligase domain I635_01035 PF08245 Mur ligase middle domain I635_01035 PF01225 Mur ligase family, catalytic domain I635_01040 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain I635_01045 PF00719 Inorganic pyrophosphatase I635_01075 PF17760 UvrA interaction domain I635_01075 PF17755 UvrA DNA-binding domain I635_01075 PF00005 ABC transporter I635_01080 PF07690 Major Facilitator Superfamily I635_01085 PF13419 Haloacid dehalogenase-like hydrolase I635_01105 PF00356 Bacterial regulatory proteins, lacI family I635_01115 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain I635_01115 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain I635_01120 PF08544 GHMP kinases C terminal I635_01120 PF10509 Galactokinase galactose-binding signature I635_01120 PF00288 GHMP kinases N terminal domain I635_01125 PF00474 Sodium:solute symporter family I635_01130 PF00436 Single-strand binding protein family I635_01145 PF16363 GDP-mannose 4,6 dehydratase I635_01150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain I635_01150 PF02837 Glycosyl hydrolases family 2, sugar binding domain I635_01150 PF16355 Domain of unknown function (DUF4982) I635_01150 PF00703 Glycosyl hydrolases family 2 I635_01150 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 I635_01170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain I635_01170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain I635_01175 PF00455 DeoR C terminal sensor domain I635_01175 PF08220 DeoR-like helix-turn-helix domain I635_01180 PF01266 FAD dependent oxidoreductase I635_01180 PF16901 C-terminal domain of alpha-glycerophosphate oxidase I635_01215 PF00263 Bacterial type II and III secretion system protein I635_01215 PF03958 Bacterial type II/III secretion system short domain I635_01220 PF13401 AAA domain I635_01220 PF01471 Putative peptidoglycan binding domain I635_01230 PF00437 Type II/IV secretion system protein I635_01230 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain I635_01235 PF00482 Type II secretion system (T2SS), protein F I635_01245 PF07963 Prokaryotic N-terminal methylation motif I635_01245 PF00114 Pilin (bacterial filament) I635_01250 PF00114 Pilin (bacterial filament) I635_01250 PF07963 Prokaryotic N-terminal methylation motif I635_01255 PF00114 Pilin (bacterial filament) I635_01255 PF07963 Prokaryotic N-terminal methylation motif I635_01285 PF04085 rod shape-determining protein MreC I635_01290 PF04093 rod shape-determining protein MreD I635_01295 PF02545 Maf-like protein I635_01300 PF00575 S1 RNA binding domain I635_01300 PF10150 Ribonuclease E/G family I635_01310 PF00795 Carbon-nitrogen hydrolase I635_01315 PF01523 Putative modulator of DNA gyrase I635_01320 PF04751 Protein of unknown function (DUF615) I635_01325 PF01523 Putative modulator of DNA gyrase I635_01330 PF02929 Beta galactosidase small chain I635_01330 PF02837 Glycosyl hydrolases family 2, sugar binding domain I635_01330 PF00703 Glycosyl hydrolases family 2 I635_01330 PF02836 Glycosyl hydrolases family 2, TIM barrel domain I635_01330 PF16353 Domain of unknown function(DUF4981) I635_01335 PF00486 Transcriptional regulatory protein, C terminal I635_01335 PF00072 Response regulator receiver domain I635_01340 PF00512 His Kinase A (phospho-acceptor) domain I635_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_01340 PF00497 Bacterial extracellular solute-binding proteins, family 3 I635_01345 PF00534 Glycosyl transferases group 1 I635_01345 PF08323 Starch synthase catalytic domain I635_01350 PF08468 Methyltransferase small domain N-terminal I635_01350 PF05175 Methyltransferase small domain I635_01355 PF02390 Putative methyltransferase I635_01360 PF00561 alpha/beta hydrolase fold I635_01365 PF00633 Helix-hairpin-helix motif I635_01365 PF00730 HhH-GPD superfamily base excision DNA repair protein I635_01365 PF14815 NUDIX domain I635_01370 PF04362 Bacterial Fe(2+) trafficking I635_01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_01390 PF00512 His Kinase A (phospho-acceptor) domain I635_01390 PF00672 HAMP domain I635_01395 PF00072 Response regulator receiver domain I635_01395 PF00486 Transcriptional regulatory protein, C terminal I635_01415 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I635_01420 PF00873 AcrB/AcrD/AcrF family I635_01465 PF01565 FAD binding domain I635_01465 PF08031 Berberine and berberine like I635_01500 PF00970 Oxidoreductase FAD-binding domain I635_01500 PF00042 Globin I635_01500 PF00175 Oxidoreductase NAD-binding domain I635_01520 PF01750 Hydrogenase maturation protease I635_01530 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal I635_01530 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit I635_01535 PF00374 Nickel-dependent hydrogenase I635_01545 PF01455 HupF/HypC family I635_01550 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA I635_01555 PF02492 CobW/HypB/UreG, nucleotide-binding domain I635_01560 PF01924 Hydrogenase formation hypA family I635_01565 PF07503 HypF finger I635_01565 PF01300 Telomere recombination I635_01565 PF17788 HypF Kae1-like domain I635_01565 PF00708 Acylphosphatase I635_01570 PF00586 AIR synthase related protein, N-terminal domain I635_01570 PF02769 AIR synthase related protein, C-terminal domain I635_01575 PF09278 MerR, DNA binding I635_01575 PF00376 MerR family regulatory protein I635_01580 PF00403 Heavy-metal-associated domain I635_01650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I635_01650 PF00529 HlyD membrane-fusion protein of T1SS I635_01655 PF00873 AcrB/AcrD/AcrF family I635_01660 PF01545 Cation efflux family I635_01660 PF16916 Dimerisation domain of Zinc Transporter I635_01670 PF01219 Prokaryotic diacylglycerol kinase I635_01675 PF00884 Sulfatase I635_01675 PF08019 Phosphoethanolamine transferase EptA/EptB I635_01680 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase I635_01690 PF00535 Glycosyl transferase family 2 I635_01695 PF00072 Response regulator receiver domain I635_01695 PF00486 Transcriptional regulatory protein, C terminal I635_01700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_01700 PF00672 HAMP domain I635_01700 PF00512 His Kinase A (phospho-acceptor) domain I635_01735 PF09278 MerR, DNA binding I635_01735 PF00376 MerR family regulatory protein I635_01740 PF00403 Heavy-metal-associated domain I635_01780 PF13520 Amino acid permease I635_01790 PF07732 Multicopper oxidase I635_01790 PF07731 Multicopper oxidase I635_01790 PF00394 Multicopper oxidase I635_01825 PF13333 Integrase core domain I635_01825 PF13276 HTH-like domain I635_01825 PF00665 Integrase core domain I635_01850 PF13333 Integrase core domain I635_01850 PF00665 Integrase core domain I635_01850 PF13276 HTH-like domain I635_01860 PF13737 Transposase DDE domain I635_01880 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family I635_01880 PF00356 Bacterial regulatory proteins, lacI family I635_01890 PF01204 Trehalase I635_01905 PF13419 Haloacid dehalogenase-like hydrolase I635_01920 PF00072 Response regulator receiver domain I635_01920 PF00512 His Kinase A (phospho-acceptor) domain I635_01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_01920 PF08448 PAS fold I635_01920 PF13426 PAS domain I635_01935 PF00356 Bacterial regulatory proteins, lacI family I635_01940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold I635_01940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain I635_01950 PF03825 Nucleoside H+ symporter I635_01960 PF00732 GMC oxidoreductase I635_01960 PF05199 GMC oxidoreductase I635_01975 PF00465 Iron-containing alcohol dehydrogenase I635_01980 PF01063 Amino-transferase class IV I635_01985 PF00300 Histidine phosphatase superfamily (branch 1) I635_01995 PF00330 Aconitase family (aconitate hydratase) I635_01995 PF00694 Aconitase C-terminal domain I635_02005 PF00437 Type II/IV secretion system protein I635_02010 PF00338 Ribosomal protein S10p/S20e I635_02015 PF00297 Ribosomal protein L3 I635_02020 PF00573 Ribosomal protein L4/L1 family I635_02025 PF00276 Ribosomal protein L23 I635_02030 PF03947 Ribosomal Proteins L2, C-terminal domain I635_02030 PF00181 Ribosomal Proteins L2, RNA binding domain I635_02035 PF00203 Ribosomal protein S19 I635_02040 PF00237 Ribosomal protein L22p/L17e I635_02045 PF00189 Ribosomal protein S3, C-terminal domain I635_02045 PF07650 KH domain I635_02050 PF00252 Ribosomal protein L16p/L10e I635_02055 PF00831 Ribosomal L29 protein I635_02060 PF00366 Ribosomal protein S17 I635_02065 PF13439 Glycosyltransferase Family 4 I635_02065 PF00534 Glycosyl transferases group 1 I635_02075 PF00534 Glycosyl transferases group 1 I635_02075 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) I635_02095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_02095 PF00672 HAMP domain I635_02095 PF02743 Cache domain I635_02100 PF01432 Peptidase family M3 I635_02110 PF00551 Formyl transferase I635_02110 PF01842 ACT domain I635_02120 PF04408 Helicase associated domain (HA2) I635_02120 PF00271 Helicase conserved C-terminal domain I635_02120 PF08482 ATP-dependent helicase C-terminal I635_02120 PF00270 DEAD/DEAH box helicase I635_02125 PF13406 Transglycosylase SLT domain I635_02130 PF00912 Transglycosylase I635_02130 PF00905 Penicillin binding protein transpeptidase domain I635_02130 PF14814 Bifunctional transglycosylase second domain I635_02145 PF05661 Protein of unknown function (DUF808) I635_02150 PF12833 Helix-turn-helix domain I635_02160 PF00543 Nitrogen regulatory protein P-II I635_02165 PF00909 Ammonium Transporter Family I635_02175 PF04261 Dyp-type peroxidase family I635_02180 PF00672 HAMP domain I635_02180 PF00211 Adenylate and Guanylate cyclase catalytic domain I635_02185 PF00202 Aminotransferase class-III I635_02190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain I635_02190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain I635_02205 PF00873 AcrB/AcrD/AcrF family I635_02215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_02215 PF01627 Hpt domain I635_02215 PF00072 Response regulator receiver domain I635_02215 PF00672 HAMP domain I635_02215 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) I635_02215 PF00512 His Kinase A (phospho-acceptor) domain I635_02220 PF00521 DNA gyrase/topoisomerase IV, subunit A I635_02220 PF03989 DNA gyrase C-terminal domain, beta-propeller I635_02230 PF03707 Bacterial signalling protein N terminal repeat I635_02230 PF13188 PAS domain I635_02230 PF00563 EAL domain I635_02230 PF00990 Diguanylate cyclase, GGDEF domain I635_02240 PF00171 Aldehyde dehydrogenase family I635_02245 PF04958 Arginine N-succinyltransferase beta subunit I635_02250 PF00202 Aminotransferase class-III I635_02260 PF00117 Glutamine amidotransferase class-I I635_02265 PF00579 tRNA synthetases class I (W and Y) I635_02270 PF00834 Ribulose-phosphate 3 epimerase family I635_02290 PF02086 D12 class N6 adenine-specific DNA methyltransferase I635_02300 PF01761 3-dehydroquinate synthase I635_02305 PF01202 Shikimate kinase I635_02310 PF03958 Bacterial type II/III secretion system short domain I635_02310 PF07660 Secretin and TonB N terminus short domain I635_02310 PF11741 AMIN domain I635_02310 PF00263 Bacterial type II and III secretion system protein I635_02335 PF00905 Penicillin binding protein transpeptidase domain I635_02335 PF00912 Transglycosylase I635_02335 PF17092 Penicillin-binding protein OB-like domain I635_02340 PF03949 Malic enzyme, NAD binding domain I635_02340 PF00390 Malic enzyme, N-terminal domain I635_02355 PF02798 Glutathione S-transferase, N-terminal domain I635_02365 PF06628 Catalase-related immune-responsive I635_02365 PF00199 Catalase I635_02380 PF00990 Diguanylate cyclase, GGDEF domain I635_02380 PF00563 EAL domain I635_02380 PF03707 Bacterial signalling protein N terminal repeat I635_02385 PF00583 Acetyltransferase (GNAT) family I635_02385 PF00696 Amino acid kinase family I635_02390 PF00206 Lyase I635_02390 PF14698 Argininosuccinate lyase C-terminal I635_02395 PF00764 Arginosuccinate synthase I635_02400 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain I635_02400 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain I635_02405 PF00696 Amino acid kinase family I635_02410 PF01118 Semialdehyde dehydrogenase, NAD binding domain I635_02410 PF02774 Semialdehyde dehydrogenase, dimerisation domain I635_02415 PF02142 MGS-like domain I635_02425 PF00072 Response regulator receiver domain I635_02425 PF00486 Transcriptional regulatory protein, C terminal I635_02430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_02430 PF00672 HAMP domain I635_02430 PF16527 Two-component sensor protein CpxA, periplasmic domain I635_02430 PF00512 His Kinase A (phospho-acceptor) domain I635_02435 PF12146 Serine aminopeptidase, S33 I635_02440 PF00588 SpoU rRNA Methylase family I635_02450 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus I635_02450 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus I635_02455 PF02556 Preprotein translocase subunit SecB I635_02460 PF00462 Glutaredoxin I635_02465 PF00581 Rhodanese-like domain I635_02470 PF01551 Peptidase family M23 I635_02475 PF04748 Divergent polysaccharide deacetylase I635_02495 PF02666 Phosphatidylserine decarboxylase I635_02500 PF03193 RsgA GTPase I635_02505 PF00929 Exonuclease I635_02515 PF00593 TonB dependent receptor I635_02515 PF07715 TonB-dependent Receptor Plug Domain I635_02530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain I635_02530 PF00205 Thiamine pyrophosphate enzyme, central domain I635_02530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain I635_02535 PF10369 Small subunit of acetolactate synthase I635_02545 PF02416 mttA/Hcf106 family I635_02550 PF02416 mttA/Hcf106 family I635_02555 PF00902 Sec-independent protein translocase protein (TatC) I635_02565 PF01026 TatD related DNase I635_02570 PF00563 EAL domain I635_02570 PF01590 GAF domain I635_02570 PF00990 Diguanylate cyclase, GGDEF domain I635_02570 PF00360 Phytochrome region I635_02575 PF00490 Delta-aminolevulinic acid dehydratase I635_02580 PF02541 Ppx/GppA phosphatase family I635_02585 PF00270 DEAD/DEAH box helicase I635_02585 PF00271 Helicase conserved C-terminal domain I635_02590 PF00085 Thioredoxin I635_02595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I635_02595 PF07498 Rho termination factor, N-terminal domain I635_02595 PF07497 Rho termination factor, RNA-binding domain I635_02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_02605 PF00512 His Kinase A (phospho-acceptor) domain I635_02605 PF09308 LuxQ, periplasmic I635_02605 PF00072 Response regulator receiver domain I635_02610 PF06965 Na+/H+ antiporter 1 I635_02615 PF00731 AIR carboxylase I635_02620 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain I635_02620 PF02222 ATP-grasp domain I635_02630 PF00210 Ferritin-like domain I635_02635 PF07995 Glucose / Sorbosone dehydrogenase I635_02640 PF00326 Prolyl oligopeptidase family I635_02640 PF07676 WD40-like Beta Propeller Repeat I635_02650 PF00085 Thioredoxin I635_02665 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) I635_02670 PF00709 Adenylosuccinate synthetase I635_02675 PF00171 Aldehyde dehydrogenase family I635_02695 PF03553 Na+/H+ antiporter family I635_02700 PF00933 Glycosyl hydrolase family 3 N terminal domain I635_02710 PF07075 Protein of unknown function (DUF1343) I635_02715 PF01380 SIS domain I635_02720 PF01168 Alanine racemase, N-terminal domain I635_02720 PF00842 Alanine racemase, C-terminal domain I635_02725 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 I635_02735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily I635_02760 PF08274 PhnA Zinc-Ribbon I635_02760 PF03831 PhnA domain I635_02765 PF00583 Acetyltransferase (GNAT) family I635_02795 PF01381 Helix-turn-helix I635_02800 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB I635_02810 PF05016 ParE toxin of type II toxin-antitoxin system, parDE I635_02900 PF00108 Thiolase, N-terminal domain I635_02900 PF02803 Thiolase, C-terminal domain I635_02905 PF00378 Enoyl-CoA hydratase/isomerase I635_02905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain I635_02905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain I635_02910 PF14718 Soluble lytic murein transglycosylase L domain I635_02910 PF01464 Transglycosylase SLT domain I635_02915 PF00557 Metallopeptidase family M24 I635_02925 PF00348 Polyprenyl synthetase I635_02930 PF00829 Ribosomal prokaryotic L21 protein I635_02935 PF01016 Ribosomal L27 protein I635_02940 PF01926 50S ribosome-binding GTPase I635_02940 PF01018 GTP1/OBG I635_02945 PF00186 Dihydrofolate reductase I635_02950 PF04539 Sigma-70 region 3 I635_02950 PF00140 Sigma-70 factor, region 1.2 I635_02950 PF04542 Sigma-70 region 2 I635_02950 PF04545 Sigma-70, region 4 I635_02955 PF01551 Peptidase family M23 I635_02955 PF01476 LysM domain I635_02960 PF09335 SNARE associated Golgi protein I635_02970 PF01142 tRNA pseudouridine synthase D (TruD) I635_02975 PF02542 YgbB family I635_02980 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase I635_02985 PF04977 Septum formation initiator I635_02995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_02995 PF00672 HAMP domain I635_02995 PF17200 Single Cache domain 2 I635_03005 PF18327 Proline utilization A proline dehydrogenase N-terminal domain I635_03005 PF14850 DNA-binding domain of Proline dehydrogenase I635_03005 PF01619 Proline dehydrogenase I635_03005 PF00171 Aldehyde dehydrogenase family I635_03030 PF02976 DNA mismatch repair enzyme MutH I635_03035 PF00293 NUDIX domain I635_03040 PF01590 GAF domain I635_03040 PF02896 PEP-utilising enzyme, TIM barrel domain I635_03040 PF00391 PEP-utilising enzyme, mobile domain I635_03040 PF05524 PEP-utilising enzyme, N-terminal I635_03045 PF01925 Sulfite exporter TauE/SafE I635_03050 PF01790 Prolipoprotein diacylglyceryl transferase I635_03055 PF00303 Thymidylate synthase I635_03060 PF00072 Response regulator receiver domain I635_03065 PF00990 Diguanylate cyclase, GGDEF domain I635_03065 PF00072 Response regulator receiver domain I635_03070 PF07690 Major Facilitator Superfamily I635_03085 PF00849 RNA pseudouridylate synthase I635_03090 PF00271 Helicase conserved C-terminal domain I635_03090 PF12137 RNA polymerase recycling family C-terminal I635_03090 PF18337 RapA N-terminal Tudor like domain I635_03090 PF00176 SNF2 family N-terminal domain I635_03090 PF18339 RapA N-terminal Tudor like domain 1 I635_03105 PF13638 PIN domain I635_03105 PF02562 PhoH-like protein I635_03115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases I635_03115 PF10414 Sirohaem synthase dimerisation region I635_03120 PF00271 Helicase conserved C-terminal domain I635_03120 PF03880 DbpA RNA binding domain I635_03120 PF00270 DEAD/DEAH box helicase I635_03140 PF02321 Outer membrane efflux protein I635_03145 PF00293 NUDIX domain I635_03155 PF00149 Calcineurin-like phosphoesterase I635_03160 PF05728 Uncharacterised protein family (UPF0227) I635_03165 PF01751 Toprim domain I635_03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_03165 PF00986 DNA gyrase B subunit, carboxyl terminus I635_03165 PF00204 DNA gyrase B I635_03175 PF13419 Haloacid dehalogenase-like hydrolase I635_03200 PF04055 Radical SAM superfamily I635_03210 PF00152 tRNA synthetases class II (D, K and N) I635_03215 PF00593 TonB dependent receptor I635_03215 PF07715 TonB-dependent Receptor Plug Domain I635_03225 PF13302 Acetyltransferase (GNAT) domain I635_03230 PF07715 TonB-dependent Receptor Plug Domain I635_03230 PF07660 Secretin and TonB N terminus short domain I635_03230 PF00593 TonB dependent receptor I635_03240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD I635_03245 PF05175 Methyltransferase small domain I635_03255 PF01722 BolA-like protein I635_03260 PF01569 PAP2 superfamily I635_03275 PF08376 Nitrate and nitrite sensing I635_03275 PF03861 ANTAR domain I635_03285 PF01740 STAS domain I635_03285 PF00916 Sulfate permease family I635_03290 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain I635_03290 PF01077 Nitrite and sulphite reductase 4Fe-4S domain I635_03290 PF04324 BFD-like [2Fe-2S] binding domain I635_03290 PF18267 Rubredoxin NAD+ reductase C-terminal domain I635_03290 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_03300 PF00384 Molybdopterin oxidoreductase I635_03300 PF01568 Molydopterin dinucleotide binding domain I635_03300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain I635_03300 PF04324 BFD-like [2Fe-2S] binding domain I635_03305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases I635_03305 PF10414 Sirohaem synthase dimerisation region I635_03305 PF14824 Sirohaem biosynthesis protein central I635_03310 PF02885 Glycosyl transferase family, helical bundle domain I635_03310 PF00591 Glycosyl transferase family, a/b domain I635_03315 PF08447 PAS fold I635_03315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_03315 PF13426 PAS domain I635_03320 PF00005 ABC transporter I635_03325 PF00528 Binding-protein-dependent transport system inner membrane component I635_03330 PF00005 ABC transporter I635_03345 PF01323 DSBA-like thioredoxin domain I635_03350 PF00593 TonB dependent receptor I635_03350 PF07715 TonB-dependent Receptor Plug Domain I635_03355 PF01636 Phosphotransferase enzyme family I635_03360 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase I635_03360 PF12801 4Fe-4S binding domain I635_03360 PF13746 4Fe-4S dicluster domain I635_03375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I635_03375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_03375 PF12806 Acetyl-CoA dehydrogenase C-terminal like I635_03375 PF02770 Acyl-CoA dehydrogenase, middle domain I635_03390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain I635_03390 PF13378 Enolase C-terminal domain-like I635_03395 PF00596 Class II Aldolase and Adducin N-terminal domain I635_03405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I635_03410 PF00873 AcrB/AcrD/AcrF family I635_03425 PF02743 Cache domain I635_03425 PF00672 HAMP domain I635_03425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_03430 PF03979 Sigma-70 factor, region 1.1 I635_03430 PF04545 Sigma-70, region 4 I635_03430 PF04539 Sigma-70 region 3 I635_03430 PF04542 Sigma-70 region 2 I635_03430 PF00140 Sigma-70 factor, region 1.2 I635_03430 PF04546 Sigma-70, non-essential region I635_03435 PF01807 CHC2 zinc finger I635_03435 PF08278 DNA primase DnaG DnaB-binding I635_03435 PF08275 DNA primase catalytic core, N-terminal domain I635_03435 PF10410 DnaB-helicase binding domain of primase I635_03450 PF01165 Ribosomal protein S21 I635_03455 PF00814 Glycoprotease family I635_03465 PF02660 Glycerol-3-phosphate acyltransferase I635_03470 PF02152 Dihydroneopterin aldolase I635_03480 PF02673 Bacitracin resistance protein BacA I635_03485 PF01230 HIT domain I635_03500 PF03594 Benzoate membrane transport protein I635_03505 PF07883 Cupin domain I635_03505 PF01381 Helix-turn-helix I635_03510 PF04381 Putative exonuclease, RdgC I635_03515 PF00512 His Kinase A (phospho-acceptor) domain I635_03515 PF00497 Bacterial extracellular solute-binding proteins, family 3 I635_03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_03520 PF00486 Transcriptional regulatory protein, C terminal I635_03520 PF00072 Response regulator receiver domain I635_03525 PF00512 His Kinase A (phospho-acceptor) domain I635_03525 PF11808 Phosphate regulon sensor protein PhoR I635_03525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_03525 PF00989 PAS fold I635_03530 PF12849 PBP superfamily domain I635_03550 PF01618 MotA/TolQ/ExbB proton channel family I635_03555 PF01618 MotA/TolQ/ExbB proton channel family I635_03560 PF02472 Biopolymer transport protein ExbD/TolR I635_03565 PF03544 Gram-negative bacterial TonB protein C-terminal I635_03575 PF00072 Response regulator receiver domain I635_03580 PF00672 HAMP domain I635_03580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_03580 PF00512 His Kinase A (phospho-acceptor) domain I635_03580 PF01627 Hpt domain I635_03580 PF00072 Response regulator receiver domain I635_03580 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) I635_03585 PF00501 AMP-binding enzyme I635_03585 PF13193 AMP-binding enzyme C-terminal domain I635_03595 PF07995 Glucose / Sorbosone dehydrogenase I635_03600 PF11791 Aconitate B N-terminal domain I635_03600 PF06434 Aconitate hydratase 2 N-terminus I635_03600 PF00330 Aconitase family (aconitate hydratase) I635_03605 PF01048 Phosphorylase superfamily I635_03620 PF00330 Aconitase family (aconitate hydratase) I635_03620 PF06434 Aconitate hydratase 2 N-terminus I635_03620 PF11791 Aconitate B N-terminal domain I635_03630 PF01842 ACT domain I635_03630 PF00696 Amino acid kinase family I635_03635 PF00672 HAMP domain I635_03635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_03640 PF00149 Calcineurin-like phosphoesterase I635_03645 PF04379 ApaG domain I635_03650 PF00398 Ribosomal RNA adenine dimethylase I635_03655 PF04166 Pyridoxal phosphate biosynthetic protein PdxA I635_03660 PF00639 PPIC-type PPIASE domain I635_03660 PF09312 SurA N-terminal domain I635_03665 PF03968 OstA-like protein I635_03665 PF04453 LPS transport system D I635_03670 PF00226 DnaJ domain I635_03670 PF05099 Tellurite resistance protein TerB I635_03675 PF00589 Phage integrase family I635_03675 PF02899 Phage integrase, N-terminal SAM-like domain I635_03680 PF13098 Thioredoxin-like domain I635_03680 PF10411 Disulfide bond isomerase protein N-terminus I635_03685 PF17768 RecJ OB domain I635_03685 PF01368 DHH family I635_03685 PF02272 DHHA1 domain I635_03695 PF11967 Recombination protein O N terminal I635_03695 PF02565 Recombination protein O C terminal I635_03700 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ I635_03705 PF01648 4'-phosphopantetheinyl transferase superfamily I635_03710 PF05958 tRNA (Uracil-5-)-methyltransferase I635_03715 PF04607 Region found in RelA / SpoT proteins I635_03715 PF13291 ACT domain I635_03715 PF02824 TGS domain I635_03720 PF03819 MazG nucleotide pyrophosphohydrolase domain I635_03755 PF00501 AMP-binding enzyme I635_03755 PF13193 AMP-binding enzyme C-terminal domain I635_03765 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase I635_03775 PF00535 Glycosyl transferase family 2 I635_03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_03795 PF08521 Two-component sensor kinase N-terminal I635_03795 PF00512 His Kinase A (phospho-acceptor) domain I635_03800 PF00486 Transcriptional regulatory protein, C terminal I635_03800 PF00072 Response regulator receiver domain I635_03810 PF00572 Ribosomal protein L13 I635_03815 PF00380 Ribosomal protein S9/S16 I635_03820 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal I635_03820 PF00355 Rieske [2Fe-2S] domain I635_03825 PF00033 Cytochrome b/b6/petB I635_03825 PF00032 Cytochrome b(C-terminal)/b6/petD I635_03830 PF02167 Cytochrome C1 family I635_03835 PF00043 Glutathione S-transferase, C-terminal domain I635_03835 PF02798 Glutathione S-transferase, N-terminal domain I635_03840 PF04386 Stringent starvation protein B I635_03845 PF01769 Divalent cation transporter I635_03845 PF03448 MgtE intracellular N domain I635_03845 PF00571 CBS domain I635_03850 PF00381 PTS HPr component phosphorylation site I635_03855 PF03668 P-loop ATPase protein family I635_03860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 I635_03865 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein I635_03870 PF00309 Sigma-54 factor, Activator interacting domain (AID) I635_03870 PF04963 Sigma-54 factor, core binding domain I635_03870 PF04552 Sigma-54, DNA binding domain I635_03875 PF00005 ABC transporter I635_03875 PF12399 Branched-chain amino acid ATP-binding cassette transporter I635_03880 PF03968 OstA-like protein I635_03895 PF00571 CBS domain I635_03895 PF01380 SIS domain I635_03900 PF01699 Sodium/calcium exchanger protein I635_03905 PF00005 ABC transporter I635_03910 PF02405 Permease MlaE I635_03915 PF02470 MlaD protein I635_03920 PF05494 MlaC protein I635_03930 PF01722 BolA-like protein I635_03935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) I635_03940 PF13180 PDZ domain I635_03945 PF13180 PDZ domain I635_03945 PF00595 PDZ domain I635_03955 PF03969 AFG1-like ATPase I635_03960 PF01709 Transcriptional regulator I635_03980 PF02355 Protein export membrane protein I635_03980 PF07549 SecD/SecF GG Motif I635_03980 PF02355 Protein export membrane protein I635_03980 PF07549 SecD/SecF GG Motif I635_03985 PF02080 TrkA-C domain I635_03985 PF00999 Sodium/hydrogen exchanger family I635_03985 PF03471 Transporter associated domain I635_03990 PF00593 TonB dependent receptor I635_03990 PF07715 TonB-dependent Receptor Plug Domain I635_03995 PF00892 EamA-like transporter family I635_04005 PF00072 Response regulator receiver domain I635_04005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_04005 PF09308 LuxQ, periplasmic I635_04005 PF00512 His Kinase A (phospho-acceptor) domain I635_04010 PF13458 Periplasmic binding protein I635_04025 PF02773 S-adenosylmethionine synthetase, C-terminal domain I635_04025 PF02772 S-adenosylmethionine synthetase, central domain I635_04025 PF00438 S-adenosylmethionine synthetase, N-terminal domain I635_04030 PF02780 Transketolase, C-terminal domain I635_04030 PF00456 Transketolase, thiamine diphosphate binding domain I635_04030 PF02779 Transketolase, pyrimidine binding domain I635_04035 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain I635_04035 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I635_04040 PF00162 Phosphoglycerate kinase I635_04045 PF00274 Fructose-bisphosphate aldolase class-I I635_04055 PF00529 HlyD membrane-fusion protein of T1SS I635_04055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I635_04060 PF00873 AcrB/AcrD/AcrF family I635_04065 PF02321 Outer membrane efflux protein I635_04070 PF07676 WD40-like Beta Propeller Repeat I635_04070 PF00326 Prolyl oligopeptidase family I635_04075 PF02541 Ppx/GppA phosphatase family I635_04080 PF02503 Polyphosphate kinase middle domain I635_04080 PF13089 Polyphosphate kinase N-terminal domain I635_04080 PF13090 Polyphosphate kinase C-terminal domain 2 I635_04080 PF17941 Polyphosphate kinase C-terminal domain 1 I635_04090 PF00528 Binding-protein-dependent transport system inner membrane component I635_04095 PF00528 Binding-protein-dependent transport system inner membrane component I635_04100 PF00005 ABC transporter I635_04105 PF01895 PhoU domain I635_04110 PF01384 Phosphate transporter family I635_04120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_04120 PF03466 LysR substrate binding domain I635_04130 PF03006 Haemolysin-III related I635_04135 PF01047 MarR family I635_04140 PF02566 OsmC-like protein I635_04145 PF01433 Peptidase family M1 domain I635_04155 PF09186 Domain of unknown function (DUF1949) I635_04155 PF01205 Uncharacterized protein family UPF0029 I635_04165 PF13426 PAS domain I635_04165 PF08447 PAS fold I635_04165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_04175 PF12320 Type 5 capsule protein repressor C-terminal domain I635_04175 PF00149 Calcineurin-like phosphoesterase I635_04180 PF13476 AAA domain I635_04195 PF00375 Sodium:dicarboxylate symporter family I635_04200 PF00491 Arginase family I635_04205 PF01979 Amidohydrolase family I635_04210 PF00392 Bacterial regulatory proteins, gntR family I635_04210 PF07702 UTRA domain I635_04220 PF00221 Aromatic amino acid lyase I635_04250 PF12848 ABC transporter I635_04250 PF00005 ABC transporter I635_04275 PF00924 Mechanosensitive ion channel I635_04290 PF01527 Transposase I635_04325 PF00589 Phage integrase family I635_04330 PF03050 Transposase IS66 family I635_04330 PF13817 IS66 C-terminal element I635_04330 PF13007 Transposase C of IS166 homeodomain I635_04330 PF13005 zinc-finger binding domain of transposase IS66 I635_04375 PF00665 Integrase core domain I635_04380 PF01695 IstB-like ATP binding protein I635_04390 PF13333 Integrase core domain I635_04390 PF13276 HTH-like domain I635_04390 PF00665 Integrase core domain I635_04400 PF02384 N-6 DNA Methylase I635_04405 PF02384 N-6 DNA Methylase I635_04405 PF12161 HsdM N-terminal domain I635_04415 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) I635_04415 PF11867 Domain of unknown function (DUF3387) I635_04415 PF18766 SWI2/SNF2 ATPase I635_04430 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) I635_04460 PF04172 LrgB-like family I635_04465 PF00072 Response regulator receiver domain I635_04490 PF04055 Radical SAM superfamily I635_04490 PF06969 HemN C-terminal domain I635_04495 PF01725 Ham1 family I635_04500 PF00271 Helicase conserved C-terminal domain I635_04500 PF00270 DEAD/DEAH box helicase I635_04505 PF12627 Probable RNA and SrmB- binding site of polymerase A I635_04505 PF01743 Poly A polymerase head domain I635_04510 PF13401 AAA domain I635_04510 PF01471 Putative peptidoglycan binding domain I635_04520 PF11871 Domain of unknown function (DUF3391) I635_04520 PF01966 HD domain I635_04525 PF00694 Aconitase C-terminal domain I635_04530 PF00330 Aconitase family (aconitate hydratase) I635_04535 PF00180 Isocitrate/isopropylmalate dehydrogenase I635_04540 PF08502 LeuA allosteric (dimerisation) domain I635_04540 PF00682 HMGL-like I635_04550 PF00113 Enolase, C-terminal TIM barrel domain I635_04550 PF03952 Enolase, N-terminal domain I635_04555 PF06418 CTP synthase N-terminus I635_04555 PF00117 Glutamine amidotransferase class-I I635_04560 PF00488 MutS domain V I635_04560 PF05190 MutS family domain IV I635_04560 PF05192 MutS domain III I635_04560 PF05188 MutS domain II I635_04560 PF01624 MutS domain I I635_04565 PF02464 Competence-damaged protein I635_04570 PF00154 recA bacterial DNA recombination protein I635_04575 PF00005 ABC transporter I635_04580 PF12679 ABC-2 family transporter protein I635_04595 PF00005 ABC transporter I635_04600 PF03379 CcmB protein I635_04605 PF01578 Cytochrome C assembly protein I635_04610 PF04995 Heme exporter protein D (CcmD) I635_04615 PF03100 CcmE I635_04620 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal I635_04620 PF01578 Cytochrome C assembly protein I635_04625 PF08534 Redoxin I635_04630 PF03918 Cytochrome C biogenesis protein I635_04640 PF04333 MlaA lipoprotein I635_04645 PF16363 GDP-mannose 4,6 dehydratase I635_04655 PF00854 POT family I635_04665 PF00005 ABC transporter I635_04685 PF00953 Glycosyl transferase family 4 I635_04700 PF00483 Nucleotidyl transferase I635_04705 PF10531 SLBB domain I635_04710 PF18324 Hypothetical protein TT1725 I635_04710 PF00180 Isocitrate/isopropylmalate dehydrogenase I635_04725 PF11892 Domain of unknown function (DUF3412) I635_04725 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases I635_04725 PF03641 Possible lysine decarboxylase I635_04730 PF00990 Diguanylate cyclase, GGDEF domain I635_04730 PF00072 Response regulator receiver domain I635_04735 PF14489 QueF-like protein I635_04735 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term I635_04740 PF07348 Syd protein (SUKH-2) I635_04775 PF00849 RNA pseudouridylate synthase I635_04780 PF00258 Flavodoxin I635_04785 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal I635_04785 PF00132 Bacterial transferase hexapeptide (six repeats) I635_04785 PF14602 Hexapeptide repeat of succinyl-transferase I635_04790 PF01966 HD domain I635_04790 PF08335 GlnD PII-uridylyltransferase I635_04790 PF01909 Nucleotidyltransferase domain I635_04795 PF00557 Metallopeptidase family M24 I635_04800 PF00318 Ribosomal protein S2 I635_04805 PF00889 Elongation factor TS I635_04810 PF00696 Amino acid kinase family I635_04815 PF01765 Ribosome recycling factor I635_04820 PF01255 Putative undecaprenyl diphosphate synthase I635_04830 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase I635_04830 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain I635_04830 PF13288 DXP reductoisomerase C-terminal domain I635_04835 PF17820 PDZ domain I635_04835 PF02163 Peptidase family M50 I635_04840 PF01103 Surface antigen I635_04840 PF07244 Surface antigen variable number repeat I635_04845 PF03938 Outer membrane protein (OmpH-like) I635_04850 PF07977 FabA-like domain I635_04855 PF00132 Bacterial transferase hexapeptide (six repeats) I635_04855 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 I635_04860 PF02684 Lipid-A-disaccharide synthetase I635_04865 PF01351 Ribonuclease HII I635_04870 PF14579 Helix-hairpin-helix motif I635_04870 PF02811 PHP domain I635_04870 PF17657 Bacterial DNA polymerase III alpha subunit finger domain I635_04870 PF01336 OB-fold nucleic acid binding domain I635_04870 PF07733 Bacterial DNA polymerase III alpha NTPase domain I635_04875 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit I635_04880 PF11734 TilS substrate C-terminal domain I635_04880 PF01171 PP-loop family I635_04880 PF09179 TilS substrate binding domain I635_04885 PF00563 EAL domain I635_04885 PF00990 Diguanylate cyclase, GGDEF domain I635_04885 PF03707 Bacterial signalling protein N terminal repeat I635_04890 PF02080 TrkA-C domain I635_04890 PF00999 Sodium/hydrogen exchanger family I635_04890 PF02254 TrkA-N domain I635_04900 PF14437 MafB19-like deaminase I635_04910 PF00497 Bacterial extracellular solute-binding proteins, family 3 I635_04910 PF01464 Transglycosylase SLT domain I635_04915 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain I635_04915 PF02769 AIR synthase related protein, C-terminal domain I635_04915 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal I635_04925 PF01713 Smr domain I635_04965 PF00529 HlyD membrane-fusion protein of T1SS I635_04965 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I635_04970 PF00196 Bacterial regulatory proteins, luxR family I635_04970 PF00072 Response regulator receiver domain I635_05010 PF01584 CheW-like domain I635_05010 PF00072 Response regulator receiver domain I635_05015 PF01739 CheR methyltransferase, SAM binding domain I635_05015 PF03705 CheR methyltransferase, all-alpha domain I635_05020 PF00460 Flagella basal body rod protein I635_05025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I635_05025 PF00460 Flagella basal body rod protein I635_05030 PF13861 FlgD Tudor-like domain I635_05030 PF03963 Flagellar hook capping protein - N-terminal region I635_05030 PF13860 FlgD Ig-like domain I635_05035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I635_05035 PF00460 Flagella basal body rod protein I635_05035 PF07559 Flagellar basal body protein FlaE I635_05040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I635_05040 PF00460 Flagella basal body rod protein I635_05045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal I635_05045 PF00460 Flagella basal body rod protein I635_05050 PF02107 Flagellar L-ring protein I635_05055 PF02119 Flagellar P-ring protein I635_05060 PF10135 Rod binding protein I635_05060 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase I635_05080 PF00669 Bacterial flagellin N-terminal helical region I635_05080 PF07196 Flagellin hook IN motif I635_05080 PF00700 Bacterial flagellin C-terminal helical region I635_05085 PF00700 Bacterial flagellin C-terminal helical region I635_05085 PF07196 Flagellin hook IN motif I635_05085 PF00669 Bacterial flagellin N-terminal helical region I635_05090 PF00700 Bacterial flagellin C-terminal helical region I635_05090 PF00669 Bacterial flagellin N-terminal helical region I635_05090 PF07196 Flagellin hook IN motif I635_05095 PF00669 Bacterial flagellin N-terminal helical region I635_05095 PF07196 Flagellin hook IN motif I635_05095 PF00700 Bacterial flagellin C-terminal helical region I635_05100 PF03646 FlaG protein I635_05105 PF02465 Flagellar hook-associated protein 2 N-terminus I635_05105 PF07196 Flagellin hook IN motif I635_05105 PF07195 Flagellar hook-associated protein 2 C-terminus I635_05110 PF02561 Flagellar protein FliS I635_05125 PF02719 Polysaccharide biosynthesis protein I635_05130 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family I635_05140 PF03102 NeuB family I635_05140 PF08666 SAF domain I635_05160 PF00501 AMP-binding enzyme I635_05160 PF13193 AMP-binding enzyme C-terminal domain I635_05195 PF00535 Glycosyl transferase family 2 I635_05205 PF03668 P-loop ATPase protein family I635_05210 PF00535 Glycosyl transferase family 2 I635_05215 PF03275 UDP-galactopyranose mutase I635_05220 PF00535 Glycosyl transferase family 2 I635_05225 PF02348 Cytidylyltransferase I635_05230 PF00669 Bacterial flagellin N-terminal helical region I635_05230 PF00700 Bacterial flagellin C-terminal helical region I635_05235 PF00158 Sigma-54 interaction domain I635_05235 PF00072 Response regulator receiver domain I635_05235 PF02954 Bacterial regulatory protein, Fis family I635_05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_05240 PF00512 His Kinase A (phospho-acceptor) domain I635_05240 PF00989 PAS fold I635_05245 PF02954 Bacterial regulatory protein, Fis family I635_05245 PF00158 Sigma-54 interaction domain I635_05250 PF02049 Flagellar hook-basal body complex protein FliE I635_05255 PF08345 Flagellar M-ring protein C-terminal I635_05255 PF01514 Secretory protein of YscJ/FliF family I635_05260 PF01706 FliG C-terminal domain I635_05260 PF14841 FliG middle domain I635_05260 PF14842 FliG N-terminal domain I635_05270 PF18269 T3SS EscN ATPase C-terminal domain I635_05270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I635_05290 PF02154 Flagellar motor switch protein FliM I635_05290 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term I635_05295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term I635_05300 PF04347 Flagellar biosynthesis protein, FliO I635_05305 PF00813 FliP family I635_05310 PF01313 Bacterial export proteins, family 3 I635_05315 PF01311 Bacterial export proteins, family 1 I635_05320 PF01312 FlhB HrpN YscU SpaS Family I635_05325 PF00771 FHIPEP family I635_05330 PF00448 SRP54-type protein, GTPase domain I635_05335 PF10609 NUBPL iron-transfer P-loop NTPase I635_05340 PF04545 Sigma-70, region 4 I635_05340 PF04539 Sigma-70 region 3 I635_05340 PF04542 Sigma-70 region 2 I635_05345 PF00072 Response regulator receiver domain I635_05350 PF04344 Chemotaxis phosphatase, CheZ I635_05355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_05355 PF07194 P2 response regulator binding domain I635_05355 PF02895 Signal transducing histidine kinase, homodimeric domain I635_05355 PF01584 CheW-like domain I635_05355 PF01627 Hpt domain I635_05360 PF00072 Response regulator receiver domain I635_05360 PF01339 CheB methylesterase I635_05365 PF13614 AAA domain I635_05375 PF01584 CheW-like domain I635_05385 PF04204 Homoserine O-succinyltransferase I635_05390 PF02574 Homocysteine S-methyltransferase I635_05390 PF00809 Pterin binding enzyme I635_05390 PF02965 Vitamin B12 dependent methionine synthase, activation domain I635_05390 PF02607 B12 binding domain I635_05390 PF02310 B12 binding domain I635_05395 PF00809 Pterin binding enzyme I635_05395 PF02607 B12 binding domain I635_05395 PF02574 Homocysteine S-methyltransferase I635_05395 PF02310 B12 binding domain I635_05395 PF02965 Vitamin B12 dependent methionine synthase, activation domain I635_05405 PF06865 Pyrimidine/purine nucleoside phosphorylase I635_05410 PF03466 LysR substrate binding domain I635_05410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_05415 PF03466 LysR substrate binding domain I635_05415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_05420 PF00484 Carbonic anhydrase I635_05425 PF01740 STAS domain I635_05425 PF00916 Sulfate permease family I635_05435 PF13977 BetI-type transcriptional repressor, C-terminal I635_05435 PF00440 Bacterial regulatory proteins, tetR family I635_05440 PF01431 Peptidase family M13 I635_05440 PF05649 Peptidase family M13 I635_05450 PF02631 RecX family I635_05455 PF01411 tRNA synthetases class II (A) I635_05455 PF02272 DHHA1 domain I635_05455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain I635_05460 PF02599 Global regulator protein family I635_05470 PF00682 HMGL-like I635_05470 PF02436 Conserved carboxylase domain I635_05470 PF00364 Biotin-requiring enzyme I635_05475 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit I635_05480 PF00005 ABC transporter I635_05485 PF00005 ABC transporter I635_05485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region I635_05490 PF12911 N-terminal TM domain of oligopeptide transport permease C I635_05490 PF00528 Binding-protein-dependent transport system inner membrane component I635_05495 PF00528 Binding-protein-dependent transport system inner membrane component I635_05500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle I635_05505 PF00158 Sigma-54 interaction domain I635_05505 PF02954 Bacterial regulatory protein, Fis family I635_05510 PF04012 PspA/IM30 family I635_05525 PF00351 Biopterin-dependent aromatic amino acid hydroxylase I635_05530 PF00158 Sigma-54 interaction domain I635_05530 PF18024 Helix-turn-helix domain I635_05540 PF02798 Glutathione S-transferase, N-terminal domain I635_05540 PF14497 Glutathione S-transferase, C-terminal domain I635_05545 PF01037 Lrp/AsnC ligand binding domain I635_05550 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I635_05550 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain I635_05565 PF03301 Tryptophan 2,3-dioxygenase I635_05580 PF00593 TonB dependent receptor I635_05580 PF07715 TonB-dependent Receptor Plug Domain I635_05615 PF01618 MotA/TolQ/ExbB proton channel family I635_05620 PF01618 MotA/TolQ/ExbB proton channel family I635_05625 PF02472 Biopolymer transport protein ExbD/TolR I635_05630 PF03544 Gram-negative bacterial TonB protein C-terminal I635_05640 PF08351 Domain of unknown function (DUF1726) I635_05640 PF13718 GNAT acetyltransferase 2 I635_05640 PF17176 tRNA-binding domain I635_05640 PF05127 Helicase I635_05665 PF01636 Phosphotransferase enzyme family I635_05675 PF00583 Acetyltransferase (GNAT) family I635_05690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_05690 PF03466 LysR substrate binding domain I635_05695 PF07690 Major Facilitator Superfamily I635_05700 PF00296 Luciferase-like monooxygenase I635_05705 PF00248 Aldo/keto reductase family I635_05720 PF13533 Biotin-lipoyl like I635_05725 PF01047 MarR family I635_05740 PF01381 Helix-turn-helix I635_05745 PF07804 HipA-like C-terminal domain I635_05745 PF13657 HipA N-terminal domain I635_05770 PF01699 Sodium/calcium exchanger protein I635_05775 PF00924 Mechanosensitive ion channel I635_05775 PF05552 Conserved TM helix I635_05780 PF13438 Domain of unknown function (DUF4113) I635_05780 PF00817 impB/mucB/samB family I635_05780 PF11799 impB/mucB/samB family C-terminal domain I635_05785 PF00717 Peptidase S24-like I635_05790 PF07733 Bacterial DNA polymerase III alpha NTPase domain I635_05790 PF00929 Exonuclease I635_05790 PF02811 PHP domain I635_05790 PF14579 Helix-hairpin-helix motif I635_05790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain I635_05790 PF11490 DNA polymerase III polC-type N-terminus II I635_05805 PF02384 N-6 DNA Methylase I635_05810 PF01420 Type I restriction modification DNA specificity domain I635_05925 PF00403 Heavy-metal-associated domain I635_05930 PF00376 MerR family regulatory protein I635_05930 PF09278 MerR, DNA binding I635_05950 PF09278 MerR, DNA binding I635_05950 PF00376 MerR family regulatory protein I635_05955 PF01022 Bacterial regulatory protein, arsR family I635_05960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I635_05960 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_05965 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_05965 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_05965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I635_05965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I635_05970 PF01545 Cation efflux family I635_05980 PF00403 Heavy-metal-associated domain I635_05995 PF00873 AcrB/AcrD/AcrF family I635_06000 PF02321 Outer membrane efflux protein I635_06020 PF00873 AcrB/AcrD/AcrF family I635_06040 PF13098 Thioredoxin-like domain I635_06040 PF10411 Disulfide bond isomerase protein N-terminus I635_06055 PF10502 Signal peptidase, peptidase S26 I635_06065 PF06834 TraU protein I635_06070 PF06986 Type-1V conjugative transfer system mating pair stabilisation I635_06075 PF00580 UvrD/REP helicase N-terminal domain I635_06075 PF13361 UvrD-like helicase C-terminal domain I635_06085 PF00082 Subtilase family I635_06090 PF00004 ATPase family associated with various cellular activities (AAA) I635_06110 PF00436 Single-strand binding protein family I635_06130 PF07728 AAA domain (dynein-related subfamily) I635_06130 PF08406 CbbQ/NirQ/NorQ C-terminal I635_06150 PF00092 von Willebrand factor type A domain I635_06155 PF04002 RadC-like JAB domain I635_06175 PF03466 LysR substrate binding domain I635_06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_06190 PF06122 Conjugative relaxosome accessory transposon protein I635_06235 PF01381 Helix-turn-helix I635_06235 PF00717 Peptidase S24-like I635_06240 PF03144 Elongation factor Tu domain 2 I635_06240 PF16658 Class II release factor RF3, C-terminal domain I635_06240 PF00009 Elongation factor Tu GTP binding domain I635_06245 PF05746 DALR anticodon binding domain I635_06245 PF03485 Arginyl tRNA synthetase N terminal domain I635_06245 PF00750 tRNA synthetases class I (R) I635_06265 PF00291 Pyridoxal-phosphate dependent enzyme I635_06275 PF17158 Membrane-associated sensor, integral membrane domain I635_06275 PF00990 Diguanylate cyclase, GGDEF domain I635_06280 PF04224 Protein of unknown function, DUF417 I635_06295 PF00487 Fatty acid desaturase I635_06300 PF00042 Globin I635_06300 PF00175 Oxidoreductase NAD-binding domain I635_06300 PF00970 Oxidoreductase FAD-binding domain I635_06310 PF03462 PCRF domain I635_06310 PF00472 RF-1 domain I635_06315 PF00152 tRNA synthetases class II (D, K and N) I635_06315 PF01336 OB-fold nucleic acid binding domain I635_06320 PF08546 Ketopantoate reductase PanE/ApbA C terminal I635_06320 PF02558 Ketopantoate reductase PanE/ApbA I635_06325 PF00849 RNA pseudouridylate synthase I635_06335 PF05193 Peptidase M16 inactive domain I635_06335 PF00675 Insulinase (Peptidase family M16) I635_06340 PF04262 Glutamate-cysteine ligase I635_06365 PF01713 Smr domain I635_06370 PF05175 Methyltransferase small domain I635_06375 PF01264 Chorismate synthase I635_06385 PF04293 SpoVR like protein I635_06390 PF04285 Protein of unknown function (DUF444) I635_06395 PF08298 PrkA AAA domain I635_06395 PF06798 PrkA serine protein kinase C-terminal domain I635_06405 PF00462 Glutaredoxin I635_06410 PF00593 TonB dependent receptor I635_06410 PF07715 TonB-dependent Receptor Plug Domain I635_06425 PF07715 TonB-dependent Receptor Plug Domain I635_06425 PF00593 TonB dependent receptor I635_06430 PF04324 BFD-like [2Fe-2S] binding domain I635_06435 PF10417 C-terminal domain of 1-Cys peroxiredoxin I635_06435 PF00578 AhpC/TSA family I635_06440 PF00929 Exonuclease I635_06445 PF18393 MotY N-terminal domain I635_06445 PF00691 OmpA family I635_06450 PF03009 Glycerophosphoryl diester phosphodiesterase family I635_06455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily I635_06460 PF00313 'Cold-shock' DNA-binding domain I635_06470 PF04389 Peptidase family M28 I635_06470 PF02225 PA domain I635_06475 PF00730 HhH-GPD superfamily base excision DNA repair protein I635_06475 PF00633 Helix-hairpin-helix motif I635_06480 PF02508 Rnf-Nqr subunit, membrane protein I635_06485 PF04205 FMN-binding domain I635_06490 PF03116 NQR2, RnfD, RnfE family I635_06495 PF12838 4Fe-4S dicluster domain I635_06495 PF13375 RnfC Barrel sandwich hybrid domain I635_06495 PF10531 SLBB domain I635_06495 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit I635_06500 PF04060 Putative Fe-S cluster I635_06510 PF01554 MatE I635_06515 PF12344 Ultra-violet resistance protein B I635_06515 PF02151 UvrB/uvrC motif I635_06515 PF04851 Type III restriction enzyme, res subunit I635_06515 PF00271 Helicase conserved C-terminal domain I635_06515 PF17757 UvrB interaction domain I635_06525 PF06508 Queuosine biosynthesis protein QueC I635_06530 PF04055 Radical SAM superfamily I635_06540 PF13537 Glutamine amidotransferase domain I635_06540 PF00733 Asparagine synthase I635_06565 PF02080 TrkA-C domain I635_06565 PF03600 Citrate transporter I635_06570 PF00009 Elongation factor Tu GTP binding domain I635_06575 PF00459 Inositol monophosphatase family I635_06585 PF01507 Phosphoadenosine phosphosulfate reductase family I635_06590 PF00474 Sodium:solute symporter family I635_06595 PF00990 Diguanylate cyclase, GGDEF domain I635_06595 PF17158 Membrane-associated sensor, integral membrane domain I635_06605 PF08281 Sigma-70, region 4 I635_06605 PF04542 Sigma-70 region 2 I635_06620 PF13519 von Willebrand factor type A domain I635_06620 PF07584 Aerotolerance regulator N-terminal I635_06625 PF00092 von Willebrand factor type A domain I635_06635 PF01882 Protein of unknown function DUF58 I635_06640 PF17863 AAA lid domain I635_06640 PF07726 ATPase family associated with various cellular activities (AAA) I635_06645 PF02803 Thiolase, C-terminal domain I635_06645 PF00108 Thiolase, N-terminal domain I635_06650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain I635_06650 PF00378 Enoyl-CoA hydratase/isomerase I635_06650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain I635_06665 PF00990 Diguanylate cyclase, GGDEF domain I635_06665 PF00563 EAL domain I635_06665 PF03707 Bacterial signalling protein N terminal repeat I635_06670 PF05193 Peptidase M16 inactive domain I635_06670 PF00675 Insulinase (Peptidase family M16) I635_06675 PF00300 Histidine phosphatase superfamily (branch 1) I635_06685 PF00571 CBS domain I635_06685 PF03471 Transporter associated domain I635_06685 PF01595 Cyclin M transmembrane N-terminal domain I635_06690 PF01578 Cytochrome C assembly protein I635_06695 PF00448 SRP54-type protein, GTPase domain I635_06695 PF02978 Signal peptide binding domain I635_06695 PF02881 SRP54-type protein, helical bundle domain I635_06735 PF00873 AcrB/AcrD/AcrF family I635_06740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I635_06745 PF00664 ABC transporter transmembrane region I635_06745 PF00005 ABC transporter I635_06760 PF00886 Ribosomal protein S16 I635_06765 PF01782 RimM N-terminal domain I635_06765 PF05239 PRC-barrel domain I635_06770 PF01746 tRNA (Guanine-1)-methyltransferase I635_06775 PF01245 Ribosomal protein L19 I635_06780 PF03458 UPF0126 domain I635_06785 PF00378 Enoyl-CoA hydratase/isomerase I635_06790 PF00793 DAHP synthetase I family I635_06795 PF02153 Prephenate dehydrogenase I635_06795 PF01817 Chorismate mutase type II I635_06800 PF00800 Prephenate dehydratase I635_06800 PF01817 Chorismate mutase type II I635_06805 PF00072 Response regulator receiver domain I635_06810 PF01253 Translation initiation factor SUI1 I635_06820 PF00072 Response regulator receiver domain I635_06820 PF00486 Transcriptional regulatory protein, C terminal I635_06830 PF00990 Diguanylate cyclase, GGDEF domain I635_06830 PF03707 Bacterial signalling protein N terminal repeat I635_06830 PF00563 EAL domain I635_06840 PF00512 His Kinase A (phospho-acceptor) domain I635_06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_06850 PF00072 Response regulator receiver domain I635_06850 PF00158 Sigma-54 interaction domain I635_06855 PF00700 Bacterial flagellin C-terminal helical region I635_06855 PF07196 Flagellin hook IN motif I635_06855 PF00669 Bacterial flagellin N-terminal helical region I635_06875 PF00152 tRNA synthetases class II (D, K and N) I635_06875 PF01336 OB-fold nucleic acid binding domain I635_06875 PF02938 GAD domain I635_06880 PF00293 NUDIX domain I635_06885 PF02075 Crossover junction endodeoxyribonuclease RuvC I635_06895 PF05496 Holliday junction DNA helicase RuvB P-loop domain I635_06895 PF17864 RuvB AAA lid domain I635_06895 PF05491 RuvB C-terminal winged helix domain I635_06900 PF03061 Thioesterase superfamily I635_06905 PF01618 MotA/TolQ/ExbB proton channel family I635_06910 PF02472 Biopolymer transport protein ExbD/TolR I635_06920 PF07676 WD40-like Beta Propeller Repeat I635_06920 PF04052 TolB amino-terminal domain I635_06925 PF00691 OmpA family I635_06930 PF16331 TolA binding protein trimerisation I635_06930 PF13174 Tetratricopeptide repeat I635_06940 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) I635_06950 PF02445 Quinolinate synthetase A protein I635_06965 PF02796 Helix-turn-helix domain of resolvase I635_06965 PF00239 Resolvase, N terminal domain I635_06980 PF01734 Patatin-like phospholipase I635_06985 PF02558 Ketopantoate reductase PanE/ApbA I635_06985 PF08546 Ketopantoate reductase PanE/ApbA C terminal I635_06995 PF00512 His Kinase A (phospho-acceptor) domain I635_06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_06995 PF09308 LuxQ, periplasmic I635_06995 PF00072 Response regulator receiver domain I635_07005 PF01118 Semialdehyde dehydrogenase, NAD binding domain I635_07005 PF02774 Semialdehyde dehydrogenase, dimerisation domain I635_07015 PF01292 Prokaryotic cytochrome b561 I635_07020 PF00563 EAL domain I635_07020 PF00990 Diguanylate cyclase, GGDEF domain I635_07020 PF03707 Bacterial signalling protein N terminal repeat I635_07035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_07035 PF03466 LysR substrate binding domain I635_07040 PF01863 Protein of unknown function DUF45 I635_07050 PF00873 AcrB/AcrD/AcrF family I635_07060 PF08361 MAATS-type transcriptional repressor, C-terminal region I635_07060 PF00440 Bacterial regulatory proteins, tetR family I635_07065 PF07715 TonB-dependent Receptor Plug Domain I635_07065 PF00593 TonB dependent receptor I635_07075 PF00873 AcrB/AcrD/AcrF family I635_07085 PF00990 Diguanylate cyclase, GGDEF domain I635_07095 PF02470 MlaD protein I635_07100 PF04403 Paraquat-inducible protein A I635_07115 PF01336 OB-fold nucleic acid binding domain I635_07115 PF00152 tRNA synthetases class II (D, K and N) I635_07125 PF01699 Sodium/calcium exchanger protein I635_07130 PF08443 RimK-like ATP-grasp domain I635_07130 PF18030 RimK PreATP-grasp domain I635_07150 PF00202 Aminotransferase class-III I635_07155 PF04055 Radical SAM superfamily I635_07155 PF06968 Biotin and Thiamin Synthesis associated domain I635_07160 PF00155 Aminotransferase class I and II I635_07175 PF03575 Peptidase family S51 I635_07180 PF01451 Low molecular weight phosphotyrosine protein phosphatase I635_07185 PF01032 FecCD transport family I635_07190 PF00005 ABC transporter I635_07195 PF01474 Class-II DAHP synthetase family I635_07210 PF00005 ABC transporter I635_07210 PF00664 ABC transporter transmembrane region I635_07215 PF04055 Radical SAM superfamily I635_07215 PF06463 Molybdenum Cofactor Synthesis C I635_07225 PF00486 Transcriptional regulatory protein, C terminal I635_07225 PF00072 Response regulator receiver domain I635_07230 PF00749 tRNA synthetases class I (E and Q), catalytic domain I635_07250 PF01207 Dihydrouridine synthase (Dus) I635_07265 PF13472 GDSL-like Lipase/Acylhydrolase family I635_07270 PF00005 ABC transporter I635_07280 PF08338 Domain of unknown function (DUF1731) I635_07280 PF01370 NAD dependent epimerase/dehydratase family I635_07285 PF02152 Dihydroneopterin aldolase I635_07290 PF01594 AI-2E family transporter I635_07295 PF08918 PhoQ Sensor I635_07295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_07300 PF00486 Transcriptional regulatory protein, C terminal I635_07300 PF00072 Response regulator receiver domain I635_07315 PF03795 YCII-related domain I635_07320 PF00290 Tryptophan synthase alpha chain I635_07325 PF00291 Pyridoxal-phosphate dependent enzyme I635_07330 PF00218 Indole-3-glycerol phosphate synthase I635_07330 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase I635_07335 PF00591 Glycosyl transferase family, a/b domain I635_07335 PF02885 Glycosyl transferase family, helical bundle domain I635_07340 PF00117 Glutamine amidotransferase class-I I635_07345 PF00425 chorismate binding enzyme I635_07345 PF04715 Anthranilate synthase component I, N terminal region I635_07350 PF02811 PHP domain I635_07355 PF01300 Telomere recombination I635_07360 PF02616 Segregation and condensation protein ScpA I635_07365 PF04079 Segregation and condensation complex subunit ScpB I635_07370 PF01479 S4 domain I635_07370 PF00849 RNA pseudouridylate synthase I635_07375 PF00248 Aldo/keto reductase family I635_07380 PF14602 Hexapeptide repeat of succinyl-transferase I635_07380 PF12464 Maltose acetyltransferase I635_07390 PF04286 Protein of unknown function (DUF445) I635_07405 PF00005 ABC transporter I635_07405 PF00664 ABC transporter transmembrane region I635_07410 PF00529 HlyD membrane-fusion protein of T1SS I635_07410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I635_07415 PF05724 Thiopurine S-methyltransferase (TPMT) I635_07420 PF04355 SmpA / OmlA family I635_07425 PF02463 RecF/RecN/SMC N terminal domain I635_07430 PF00210 Ferritin-like domain I635_07440 PF00465 Iron-containing alcohol dehydrogenase I635_07455 PF00561 alpha/beta hydrolase fold I635_07465 PF00593 TonB dependent receptor I635_07465 PF07715 TonB-dependent Receptor Plug Domain I635_07470 PF00196 Bacterial regulatory proteins, luxR family I635_07470 PF00072 Response regulator receiver domain I635_07475 PF00512 His Kinase A (phospho-acceptor) domain I635_07475 PF01627 Hpt domain I635_07475 PF00072 Response regulator receiver domain I635_07475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_07475 PF00672 HAMP domain I635_07480 PF01025 GrpE I635_07485 PF00012 Hsp70 protein I635_07490 PF01556 DnaJ C terminal domain I635_07490 PF00684 DnaJ central domain I635_07490 PF00226 DnaJ domain I635_07495 PF01322 Cytochrome C' I635_07500 PF12792 CSS motif domain associated with EAL I635_07500 PF00563 EAL domain I635_07505 PF13193 AMP-binding enzyme C-terminal domain I635_07505 PF16177 Acetyl-coenzyme A synthetase N-terminus I635_07505 PF00501 AMP-binding enzyme I635_07515 PF01113 Dihydrodipicolinate reductase, N-terminus I635_07515 PF05173 Dihydrodipicolinate reductase, C-terminus I635_07520 PF00117 Glutamine amidotransferase class-I I635_07520 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain I635_07525 PF02142 MGS-like domain I635_07525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain I635_07525 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain I635_07530 PF03449 Transcription elongation factor, N-terminal I635_07530 PF01272 Transcription elongation factor, GreA/GreB, C-term I635_07545 PF00011 Hsp20/alpha crystallin family I635_07550 PF00871 Acetokinase family I635_07555 PF01515 Phosphate acetyl/butaryl transferase I635_07555 PF07085 DRTGG domain I635_07570 PF00795 Carbon-nitrogen hydrolase I635_07575 PF03471 Transporter associated domain I635_07575 PF00571 CBS domain I635_07580 PF02130 Uncharacterized protein family UPF0054 I635_07585 PF02562 PhoH-like protein I635_07590 PF04055 Radical SAM superfamily I635_07590 PF00919 Uncharacterized protein family UPF0004 I635_07590 PF01938 TRAM domain I635_07595 PF01494 FAD binding domain I635_07635 PF00593 TonB dependent receptor I635_07635 PF07715 TonB-dependent Receptor Plug Domain I635_07640 PF03061 Thioesterase superfamily I635_07645 PF01613 Flavin reductase like domain I635_07655 PF01235 Sodium:alanine symporter family I635_07665 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD I635_07670 PF01926 50S ribosome-binding GTPase I635_07670 PF06071 Protein of unknown function (DUF933) I635_07675 PF01195 Peptidyl-tRNA hydrolase I635_07685 PF14693 Ribosomal protein TL5, C-terminal domain I635_07685 PF01386 Ribosomal L25p family I635_07690 PF08240 Alcohol dehydrogenase GroES-like domain I635_07690 PF00107 Zinc-binding dehydrogenase I635_07705 PF14572 Phosphoribosyl synthetase-associated domain I635_07705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase I635_07710 PF08544 GHMP kinases C terminal I635_07710 PF00288 GHMP kinases N terminal domain I635_07715 PF03550 Outer membrane lipoprotein LolB I635_07720 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain I635_07720 PF01488 Shikimate / quinate 5-dehydrogenase I635_07720 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain I635_07725 PF03462 PCRF domain I635_07725 PF00472 RF-1 domain I635_07730 PF13847 Methyltransferase domain I635_07730 PF17827 PrmC N-terminal domain I635_07735 PF11849 Domain of unknown function (DUF3369) I635_07740 PF04247 Invasion gene expression up-regulator, SirB I635_07755 PF03466 LysR substrate binding domain I635_07755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_07765 PF04241 Protein of unknown function (DUF423) I635_07770 PF18125 RlmM ferredoxin-like domain I635_07770 PF01728 FtsJ-like methyltransferase I635_07775 PF00009 Elongation factor Tu GTP binding domain I635_07775 PF14492 Elongation Factor G, domain II I635_07775 PF00679 Elongation factor G C-terminus I635_07775 PF03764 Elongation factor G, domain IV I635_07775 PF03144 Elongation factor Tu domain 2 I635_07780 PF02560 Cyanate lyase C-terminal domain I635_07785 PF02560 Cyanate lyase C-terminal domain I635_07790 PF00069 Protein kinase domain I635_07795 PF01226 Formate/nitrite transporter I635_07800 PF11992 Domain of unknown function (DUF3488) I635_07800 PF13559 Domain of unknown function (DUF4129) I635_07800 PF01841 Transglutaminase-like superfamily I635_07810 PF07726 ATPase family associated with various cellular activities (AAA) I635_07810 PF17863 AAA lid domain I635_07815 PF03925 SeqA protein C-terminal domain I635_07815 PF17206 SeqA protein N-terminal domain I635_07820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain I635_07820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II I635_07820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I I635_07820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III I635_07825 PF00343 Carbohydrate phosphorylase I635_07830 PF03707 Bacterial signalling protein N terminal repeat I635_07830 PF00990 Diguanylate cyclase, GGDEF domain I635_07830 PF00563 EAL domain I635_07835 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family I635_07845 PF01906 Putative heavy-metal-binding I635_07850 PF00375 Sodium:dicarboxylate symporter family I635_07865 PF07687 Peptidase dimerisation domain I635_07865 PF01546 Peptidase family M20/M25/M40 I635_07870 PF03960 ArsC family I635_07875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 I635_07890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily I635_07895 PF04209 homogentisate 1,2-dioxygenase I635_07915 PF00091 Tubulin/FtsZ family, GTPase domain I635_07915 PF12327 FtsZ family, C-terminal domain I635_07925 PF00990 Diguanylate cyclase, GGDEF domain I635_07925 PF00563 EAL domain I635_07925 PF03707 Bacterial signalling protein N terminal repeat I635_07930 PF00990 Diguanylate cyclase, GGDEF domain I635_07930 PF00563 EAL domain I635_07930 PF03707 Bacterial signalling protein N terminal repeat I635_07935 PF00873 AcrB/AcrD/AcrF family I635_07945 PF02254 TrkA-N domain I635_07945 PF00999 Sodium/hydrogen exchanger family I635_07950 PF02525 Flavodoxin-like fold I635_07960 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase I635_07965 PF00111 2Fe-2S iron-sulfur cluster binding domain I635_07965 PF01799 [2Fe-2S] binding domain I635_07970 PF01638 HxlR-like helix-turn-helix I635_07975 PF13426 PAS domain I635_07975 PF08447 PAS fold I635_07975 PF05231 MASE1 I635_07975 PF00990 Diguanylate cyclase, GGDEF domain I635_07975 PF00563 EAL domain I635_07975 PF08448 PAS fold I635_07985 PF01979 Amidohydrolase family I635_07990 PF00576 HIUase/Transthyretin family I635_08005 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I635_08005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase I635_08010 PF01799 [2Fe-2S] binding domain I635_08010 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I635_08010 PF00111 2Fe-2S iron-sulfur cluster binding domain I635_08010 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase I635_08020 PF00440 Bacterial regulatory proteins, tetR family I635_08020 PF08362 YcdC-like protein, C-terminal region I635_08035 PF00860 Permease family I635_08040 PF00962 Adenosine/AMP deaminase I635_08050 PF00072 Response regulator receiver domain I635_08055 PF00563 EAL domain I635_08055 PF00360 Phytochrome region I635_08055 PF01590 GAF domain I635_08055 PF00990 Diguanylate cyclase, GGDEF domain I635_08060 PF00990 Diguanylate cyclase, GGDEF domain I635_08060 PF00360 Phytochrome region I635_08060 PF01590 GAF domain I635_08060 PF00563 EAL domain I635_08065 PF00072 Response regulator receiver domain I635_08065 PF00512 His Kinase A (phospho-acceptor) domain I635_08065 PF09308 LuxQ, periplasmic I635_08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_08075 PF00593 TonB dependent receptor I635_08075 PF07715 TonB-dependent Receptor Plug Domain I635_08080 PF00860 Permease family I635_08090 PF01546 Peptidase family M20/M25/M40 I635_08090 PF07687 Peptidase dimerisation domain I635_08095 PF00266 Aminotransferase class-V I635_08100 PF01925 Sulfite exporter TauE/SafE I635_08110 PF01425 Amidase I635_08155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain I635_08155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) I635_08155 PF02824 TGS domain I635_08155 PF03129 Anticodon binding domain I635_08160 PF00707 Translation initiation factor IF-3, C-terminal domain I635_08160 PF05198 Translation initiation factor IF-3, N-terminal domain I635_08165 PF01632 Ribosomal protein L35 I635_08170 PF00453 Ribosomal protein L20 I635_08175 PF00483 Nucleotidyl transferase I635_08175 PF01050 Mannose-6-phosphate isomerase I635_08180 PF02397 Bacterial sugar transferase I635_08190 PF02563 Polysaccharide biosynthesis/export protein I635_08190 PF10531 SLBB domain I635_08190 PF18412 Outer-membrane lipoprotein Wza C-terminal domain I635_08195 PF13614 AAA domain I635_08255 PF00535 Glycosyl transferase family 2 I635_08270 PF00535 Glycosyl transferase family 2 I635_08275 PF13439 Glycosyltransferase Family 4 I635_08275 PF00534 Glycosyl transferases group 1 I635_08285 PF03808 Glycosyl transferase WecB/TagA/CpsF family I635_08300 PF01409 tRNA synthetases class II core domain (F) I635_08300 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain I635_08305 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain I635_08305 PF03484 tRNA synthetase B5 domain I635_08305 PF03483 B3/4 domain I635_08305 PF01588 Putative tRNA binding domain I635_08305 PF03147 Ferredoxin-fold anticodon binding domain I635_08310 PF00216 Bacterial DNA-binding protein I635_08320 PF04073 Aminoacyl-tRNA editing domain I635_08325 PF01804 Penicillin amidase I635_08330 PF00933 Glycosyl hydrolase family 3 N terminal domain I635_08335 PF01923 Cobalamin adenosyltransferase I635_08345 PF03461 TRCF domain I635_08345 PF02559 CarD-like/TRCF domain I635_08345 PF00271 Helicase conserved C-terminal domain I635_08345 PF00270 DEAD/DEAH box helicase I635_08345 PF17757 UvrB interaction domain I635_08355 PF12704 MacB-like periplasmic core domain I635_08355 PF02687 FtsX-like permease family I635_08365 PF13188 PAS domain I635_08365 PF00512 His Kinase A (phospho-acceptor) domain I635_08365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_08365 PF08448 PAS fold I635_08365 PF00072 Response regulator receiver domain I635_08380 PF03372 Endonuclease/Exonuclease/phosphatase family I635_08415 PF07690 Major Facilitator Superfamily I635_08425 PF00483 Nucleotidyl transferase I635_08450 PF00682 HMGL-like I635_08455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain I635_08455 PF02785 Biotin carboxylase C-terminal domain I635_08455 PF00364 Biotin-requiring enzyme I635_08455 PF00289 Biotin carboxylase, N-terminal domain I635_08460 PF00378 Enoyl-CoA hydratase/isomerase I635_08465 PF01039 Carboxyl transferase domain I635_08470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_08470 PF02770 Acyl-CoA dehydrogenase, middle domain I635_08470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I635_08475 PF13411 MerR HTH family regulatory protein I635_08480 PF00108 Thiolase, N-terminal domain I635_08480 PF02803 Thiolase, C-terminal domain I635_08490 PF00266 Aminotransferase class-V I635_08495 PF00990 Diguanylate cyclase, GGDEF domain I635_08495 PF17151 Periplasmic sensor domain I635_08505 PF00929 Exonuclease I635_08505 PF08411 Exonuclease C-terminal I635_08510 PF00589 Phage integrase family I635_08510 PF13356 Arm DNA-binding domain I635_08550 PF01580 FtsK/SpoIIIE family I635_08550 PF13491 4TM region of DNA translocase FtsK/SpoIIIE I635_08550 PF09397 Ftsk gamma domain I635_08550 PF17854 FtsK alpha domain I635_08595 PF00196 Bacterial regulatory proteins, luxR family I635_08595 PF00072 Response regulator receiver domain I635_08610 PF10548 P22AR C-terminal domain I635_08610 PF02498 BRO family, N-terminal domain I635_08680 PF00772 DnaB-like helicase N terminal domain I635_08680 PF03796 DnaB-like helicase C terminal domain I635_08770 PF10668 Phage terminase small subunit I635_08770 PF03592 Terminase small subunit I635_08870 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) I635_08870 PF01627 Hpt domain I635_08870 PF00512 His Kinase A (phospho-acceptor) domain I635_08870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_08870 PF00672 HAMP domain I635_08870 PF00072 Response regulator receiver domain I635_08875 PF01112 Asparaginase I635_08885 PF02333 Phytase I635_08920 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold I635_08920 PF00271 Helicase conserved C-terminal domain I635_08920 PF11898 Domain of unknown function (DUF3418) I635_08920 PF00270 DEAD/DEAH box helicase I635_08920 PF04408 Helicase associated domain (HA2) I635_08935 PF10672 S-adenosylmethionine-dependent methyltransferase I635_08935 PF17785 PUA-like domain I635_08940 PF08240 Alcohol dehydrogenase GroES-like domain I635_08940 PF00698 Acyl transferase domain I635_08940 PF16197 Ketoacyl-synthetase C-terminal extension I635_08940 PF00109 Beta-ketoacyl synthase, N-terminal domain I635_08940 PF00550 Phosphopantetheine attachment site I635_08940 PF02801 Beta-ketoacyl synthase, C-terminal domain I635_08940 PF14765 Polyketide synthase dehydratase I635_08940 PF08659 KR domain I635_08945 PF00075 RNase H I635_08950 PF00929 Exonuclease I635_08960 PF12792 CSS motif domain associated with EAL I635_08960 PF00563 EAL domain I635_08965 PF00005 ABC transporter I635_08970 PF02687 FtsX-like permease family I635_08970 PF12704 MacB-like periplasmic core domain I635_08975 PF00375 Sodium:dicarboxylate symporter family I635_08985 PF04996 Succinylarginine dihydrolase I635_08995 PF08272 Topoisomerase I zinc-ribbon-like I635_08995 PF01131 DNA topoisomerase I635_08995 PF01751 Toprim domain I635_08995 PF01396 Topoisomerase DNA binding C4 zinc finger I635_09010 PF12804 MobA-like NTP transferase domain I635_09015 PF02634 FdhD/NarQ family I635_09020 PF00384 Molybdopterin oxidoreductase I635_09025 PF13673 Acetyltransferase (GNAT) domain I635_09030 PF13419 Haloacid dehalogenase-like hydrolase I635_09040 PF12111 Polyribonucleotide phosphorylase C terminal I635_09040 PF10150 Ribonuclease E/G family I635_09040 PF00575 S1 RNA binding domain I635_09045 PF00849 RNA pseudouridylate synthase I635_09045 PF01479 S4 domain I635_09050 PF13419 Haloacid dehalogenase-like hydrolase I635_09055 PF02545 Maf-like protein I635_09060 PF02620 Large ribosomal RNA subunit accumulation protein YceD I635_09065 PF01783 Ribosomal L32p protein family I635_09070 PF02504 Fatty acid synthesis protein I635_09075 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal I635_09075 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III I635_09080 PF00698 Acyl transferase domain I635_09090 PF00550 Phosphopantetheine attachment site I635_09095 PF02801 Beta-ketoacyl synthase, C-terminal domain I635_09095 PF00109 Beta-ketoacyl synthase, N-terminal domain I635_09100 PF01063 Amino-transferase class IV I635_09105 PF02618 YceG-like family I635_09110 PF02223 Thymidylate kinase I635_09115 PF09115 DNA polymerase III, delta subunit, C terminal I635_09120 PF01026 TatD related DNase I635_09130 PF13460 NAD(P)H-binding I635_09135 PF00072 Response regulator receiver domain I635_09135 PF00990 Diguanylate cyclase, GGDEF domain I635_09160 PF00561 alpha/beta hydrolase fold I635_09165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain I635_09165 PF00378 Enoyl-CoA hydratase/isomerase I635_09165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain I635_09170 PF00108 Thiolase, N-terminal domain I635_09170 PF02803 Thiolase, C-terminal domain I635_09175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_09175 PF12806 Acetyl-CoA dehydrogenase C-terminal like I635_09175 PF02770 Acyl-CoA dehydrogenase, middle domain I635_09175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I635_09190 PF04198 Putative sugar-binding domain I635_09195 PF13419 Haloacid dehalogenase-like hydrolase I635_09205 PF01232 Mannitol dehydrogenase Rossmann domain I635_09205 PF08125 Mannitol dehydrogenase C-terminal domain I635_09215 PF03466 LysR substrate binding domain I635_09215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_09220 PF01575 MaoC like domain I635_09230 PF00924 Mechanosensitive ion channel I635_09235 PF07715 TonB-dependent Receptor Plug Domain I635_09235 PF00593 TonB dependent receptor I635_09240 PF01329 Pterin 4 alpha carbinolamine dehydratase I635_09245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_09245 PF00512 His Kinase A (phospho-acceptor) domain I635_09245 PF17149 Periplasmic sensor domain found in signal transduction proteins I635_09245 PF00672 HAMP domain I635_09245 PF01627 Hpt domain I635_09245 PF00072 Response regulator receiver domain I635_09250 PF00072 Response regulator receiver domain I635_09255 PF02576 RimP N-terminal domain I635_09255 PF17384 RimP C-terminal SH3 domain I635_09260 PF00575 S1 RNA binding domain I635_09260 PF08529 NusA N-terminal domain I635_09260 PF13184 NusA-like KH domain I635_09265 PF04760 Translation initiation factor IF-2, N-terminal region I635_09265 PF08364 Bacterial translation initiation factor IF-2 associated region I635_09265 PF11987 Translation-initiation factor 2 I635_09265 PF00009 Elongation factor Tu GTP binding domain I635_09270 PF02033 Ribosome-binding factor A I635_09275 PF01509 TruB family pseudouridylate synthase (N terminal domain) I635_09275 PF09157 Pseudouridine synthase II TruB, C-terminal I635_09275 PF16198 tRNA pseudouridylate synthase B C-terminal domain I635_09285 PF00312 Ribosomal protein S15 I635_09290 PF01479 S4 domain I635_09290 PF00849 RNA pseudouridylate synthase I635_09300 PF00795 Carbon-nitrogen hydrolase I635_09300 PF00583 Acetyltransferase (GNAT) family I635_09340 PF10417 C-terminal domain of 1-Cys peroxiredoxin I635_09340 PF00578 AhpC/TSA family I635_09345 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_09345 PF13192 Thioredoxin domain I635_09385 PF11842 Domain of unknown function (DUF3362) I635_09385 PF04055 Radical SAM superfamily I635_09385 PF08497 Radical SAM N-terminal I635_09400 PF07715 TonB-dependent Receptor Plug Domain I635_09400 PF00593 TonB dependent receptor I635_09405 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_09405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I635_09415 PF13416 Bacterial extracellular solute-binding protein I635_09425 PF00005 ABC transporter I635_09430 PF01066 CDP-alcohol phosphatidyltransferase I635_09455 PF00360 Phytochrome region I635_09455 PF00563 EAL domain I635_09455 PF00990 Diguanylate cyclase, GGDEF domain I635_09455 PF01590 GAF domain I635_09475 PF00239 Resolvase, N terminal domain I635_09475 PF02796 Helix-turn-helix domain of resolvase I635_09490 PF03050 Transposase IS66 family I635_09490 PF13817 IS66 C-terminal element I635_09490 PF13007 Transposase C of IS166 homeodomain I635_09490 PF13005 zinc-finger binding domain of transposase IS66 I635_09500 PF00724 NADH:flavin oxidoreductase / NADH oxidase family I635_09505 PF01668 SmpB protein I635_09510 PF03364 Polyketide cyclase / dehydrase and lipid transport I635_09515 PF03658 RnfH family Ubiquitin I635_09535 PF00593 TonB dependent receptor I635_09535 PF07715 TonB-dependent Receptor Plug Domain I635_09545 PF13181 Tetratricopeptide repeat I635_09555 PF03618 Kinase/pyrophosphorylase I635_09560 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain I635_09560 PF02896 PEP-utilising enzyme, TIM barrel domain I635_09560 PF00391 PEP-utilising enzyme, mobile domain I635_09570 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase I635_09575 PF01799 [2Fe-2S] binding domain I635_09575 PF00111 2Fe-2S iron-sulfur cluster binding domain I635_09600 PF08007 Cupin superfamily protein I635_09605 PF00211 Adenylate and Guanylate cyclase catalytic domain I635_09610 PF08328 Adenylosuccinate lyase C-terminal I635_09610 PF00206 Lyase I635_09615 PF04356 Protein of unknown function (DUF489) I635_09625 PF00849 RNA pseudouridylate synthase I635_09630 PF03971 Monomeric isocitrate dehydrogenase I635_09635 PF00313 'Cold-shock' DNA-binding domain I635_09640 PF02617 ATP-dependent Clp protease adaptor protein ClpS I635_09645 PF10431 C-terminal, D2-small domain, of ClpB protein I635_09645 PF17871 AAA lid domain I635_09645 PF02861 Clp amino terminal domain, pathogenicity island component I635_09645 PF00004 ATPase family associated with various cellular activities (AAA) I635_09645 PF07724 AAA domain (Cdc48 subfamily) I635_09650 PF01176 Translation initiation factor 1A / IF-1 I635_09655 PF04376 Arginine-tRNA-protein transferase, N terminus I635_09655 PF04377 Arginine-tRNA-protein transferase, C terminus I635_09660 PF03588 Leucyl/phenylalanyl-tRNA protein transferase I635_09665 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_09670 PF04217 Protein of unknown function, DUF412 I635_09675 PF10263 SprT-like family I635_09680 PF01343 Peptidase family S49 I635_09695 PF00881 Nitroreductase family I635_09705 PF00710 Asparaginase, N-terminal I635_09705 PF17763 Glutaminase/Asparaginase C-terminal domain I635_09710 PF04055 Radical SAM superfamily I635_09710 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family I635_09715 PF03099 Biotin/lipoate A/B protein ligase family I635_09720 PF04359 Protein of unknown function (DUF493) I635_09725 PF07943 Penicillin-binding protein 5, C-terminal domain I635_09725 PF00768 D-alanyl-D-alanine carboxypeptidase I635_09730 PF03330 Lytic transglycolase I635_09730 PF05036 Sporulation related domain I635_09735 PF01098 Cell cycle protein I635_09740 PF03717 Penicillin-binding Protein dimerisation domain I635_09740 PF00905 Penicillin binding protein transpeptidase domain I635_09745 PF02590 Predicted SPOUT methyltransferase I635_09755 PF01467 Cytidylyltransferase-like I635_09760 PF14840 Processivity clamp loader gamma complex DNA pol III C-term I635_09760 PF06144 DNA polymerase III, delta subunit I635_09765 PF04390 Lipopolysaccharide-assembly I635_09770 PF08264 Anticodon-binding domain of tRNA I635_09770 PF00133 tRNA synthetases class I (I, L, M and V) I635_09770 PF13603 Leucyl-tRNA synthetase, Domain 2 I635_09785 PF05362 Lon protease (S16) C-terminal proteolytic domain I635_09785 PF13654 AAA domain I635_09790 PF12697 Alpha/beta hydrolase family I635_09795 PF00990 Diguanylate cyclase, GGDEF domain I635_09800 PF00106 short chain dehydrogenase I635_09805 PF01985 CRS1 / YhbY (CRM) domain I635_09810 PF01728 FtsJ-like methyltransferase I635_09815 PF00004 ATPase family associated with various cellular activities (AAA) I635_09815 PF01434 Peptidase family M41 I635_09815 PF06480 FtsH Extracellular I635_09815 PF17862 AAA+ lid domain I635_09820 PF00809 Pterin binding enzyme I635_09825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I I635_09825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II I635_09825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III I635_09825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain I635_09830 PF00121 Triosephosphate isomerase I635_09835 PF03840 Preprotein translocase SecG subunit I635_09840 PF00563 EAL domain I635_09840 PF00990 Diguanylate cyclase, GGDEF domain I635_09840 PF03707 Bacterial signalling protein N terminal repeat I635_09840 PF13188 PAS domain I635_09845 PF01679 Proteolipid membrane potential modulator I635_09855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain I635_09855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I635_09860 PF02142 MGS-like domain I635_09860 PF00781 Diacylglycerol kinase catalytic domain I635_09885 PF01527 Transposase I635_09890 PF00665 Integrase core domain I635_09890 PF13333 Integrase core domain I635_09890 PF13276 HTH-like domain I635_09905 PF00474 Sodium:solute symporter family I635_09930 PF00013 KH domain I635_09930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain I635_09930 PF01138 3' exoribonuclease family, domain 1 I635_09930 PF00575 S1 RNA binding domain I635_09930 PF03725 3' exoribonuclease family, domain 2 I635_09960 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase I635_09960 PF03033 Glycosyltransferase family 28 N-terminal domain I635_10000 PF01548 Transposase I635_10000 PF02371 Transposase IS116/IS110/IS902 family I635_10040 PF02567 Phenazine biosynthesis-like protein I635_10045 PF01527 Transposase I635_10050 PF13333 Integrase core domain I635_10050 PF13276 HTH-like domain I635_10050 PF00665 Integrase core domain I635_10130 PF03544 Gram-negative bacterial TonB protein C-terminal I635_10135 PF03050 Transposase IS66 family I635_10135 PF13817 IS66 C-terminal element I635_10135 PF13005 zinc-finger binding domain of transposase IS66 I635_10135 PF13007 Transposase C of IS166 homeodomain I635_10160 PF07719 Tetratricopeptide repeat I635_10160 PF13181 Tetratricopeptide repeat I635_10175 PF02463 RecF/RecN/SMC N terminal domain I635_10175 PF06470 SMC proteins Flexible Hinge Domain I635_10180 PF04354 ZipA, C-terminal FtsZ-binding domain I635_10185 PF00533 BRCA1 C Terminus (BRCT) domain I635_10185 PF01653 NAD-dependent DNA ligase adenylation domain I635_10185 PF03120 NAD-dependent DNA ligase OB-fold domain I635_10185 PF12826 Helix-hairpin-helix motif I635_10185 PF03119 NAD-dependent DNA ligase C4 zinc finger domain I635_10205 PF00005 ABC transporter I635_10205 PF00664 ABC transporter transmembrane region I635_10210 PF02606 Tetraacyldisaccharide-1-P 4'-kinase I635_10215 PF03966 Trm112p-like protein I635_10220 PF02348 Cytidylyltransferase I635_10230 PF04055 Radical SAM superfamily I635_10230 PF18693 TRAM domain I635_10230 PF00919 Uncharacterized protein family UPF0004 I635_10245 PF00899 ThiF family I635_10250 PF13409 Glutathione S-transferase, N-terminal domain I635_10255 PF02678 Pirin I635_10255 PF05726 Pirin C-terminal cupin domain I635_10260 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain I635_10260 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III I635_10260 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I I635_10260 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II I635_10270 PF00285 Citrate synthase, C-terminal domain I635_10275 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit I635_10280 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit I635_10285 PF02910 Fumarate reductase flavoprotein C-term I635_10285 PF00890 FAD binding domain I635_10290 PF13085 2Fe-2S iron-sulfur cluster binding domain I635_10295 PF02779 Transketolase, pyrimidine binding domain I635_10295 PF16870 2-oxoglutarate dehydrogenase C-terminal I635_10295 PF16078 2-oxoglutarate dehydrogenase N-terminus I635_10295 PF00676 Dehydrogenase E1 component I635_10300 PF02817 e3 binding domain I635_10300 PF00364 Biotin-requiring enzyme I635_10300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) I635_10305 PF00549 CoA-ligase I635_10305 PF08442 ATP-grasp domain I635_10310 PF02629 CoA binding domain I635_10310 PF00549 CoA-ligase I635_10320 PF04820 Tryptophan halogenase I635_10330 PF11852 Domain of unknown function (DUF3372) I635_10330 PF03714 Bacterial pullanase-associated domain I635_10330 PF18494 Pullulanase Ins domain I635_10330 PF17967 Pullulanase N2 domain I635_10330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) I635_10335 PF01734 Patatin-like phospholipase I635_10350 PF00128 Alpha amylase, catalytic domain I635_10350 PF16657 Maltogenic Amylase, C-terminal domain I635_10350 PF02903 Alpha amylase, N-terminal ig-like domain I635_10355 PF09087 Cyclomaltodextrinase, N-terminal I635_10355 PF10438 Cyclo-malto-dextrinase C-terminal domain I635_10355 PF00128 Alpha amylase, catalytic domain I635_10365 PF01833 IPT/TIG domain I635_10365 PF02806 Alpha amylase, C-terminal all-beta domain I635_10365 PF00686 Starch binding domain I635_10365 PF00128 Alpha amylase, catalytic domain I635_10370 PF00356 Bacterial regulatory proteins, lacI family I635_10375 PF00749 tRNA synthetases class I (E and Q), catalytic domain I635_10375 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain I635_10380 PF00106 short chain dehydrogenase I635_10385 PF12262 Bacterial virulence factor lipase N-terminal I635_10390 PF01804 Penicillin amidase I635_10395 PF08496 Peptidase family S49 N-terminal I635_10395 PF01343 Peptidase family S49 I635_10410 PF01784 NIF3 (NGG1p interacting factor 3) I635_10420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain I635_10420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain I635_10425 PF00255 Glutathione peroxidase I635_10430 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase I635_10430 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase I635_10440 PF02770 Acyl-CoA dehydrogenase, middle domain I635_10440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_10440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I635_10445 PF00378 Enoyl-CoA hydratase/isomerase I635_10455 PF13847 Methyltransferase domain I635_10465 PF00884 Sulfatase I635_10465 PF11893 Domain of unknown function (DUF3413) I635_10470 PF07208 Protein of unknown function (DUF1414) I635_10475 PF04245 37-kD nucleoid-associated bacterial protein I635_10505 PF06580 Histidine kinase I635_10505 PF07694 5TMR of 5TMR-LYT I635_10510 PF00072 Response regulator receiver domain I635_10510 PF04397 LytTr DNA-binding domain I635_10515 PF00365 Phosphofructokinase I635_10530 PF16123 Hydroxyacylglutathione hydrolase C-terminus I635_10530 PF00753 Metallo-beta-lactamase superfamily I635_10545 PF00512 His Kinase A (phospho-acceptor) domain I635_10545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_10545 PF01627 Hpt domain I635_10545 PF00989 PAS fold I635_10545 PF00072 Response regulator receiver domain I635_10545 PF00497 Bacterial extracellular solute-binding proteins, family 3 I635_10565 PF00270 DEAD/DEAH box helicase I635_10565 PF00271 Helicase conserved C-terminal domain I635_10570 PF01144 Coenzyme A transferase I635_10575 PF01144 Coenzyme A transferase I635_10580 PF03466 LysR substrate binding domain I635_10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_10595 PF03466 LysR substrate binding domain I635_10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_10600 PF03313 Serine dehydratase alpha chain I635_10600 PF03315 Serine dehydratase beta chain I635_10605 PF00293 NUDIX domain I635_10610 PF04715 Anthranilate synthase component I, N terminal region I635_10610 PF00425 chorismate binding enzyme I635_10625 PF02646 RmuC family I635_10630 PF13860 FlgD Ig-like domain I635_10630 PF00082 Subtilase family I635_10630 PF05922 Peptidase inhibitor I9 I635_10630 PF02225 PA domain I635_10635 PF00676 Dehydrogenase E1 component I635_10640 PF02780 Transketolase, C-terminal domain I635_10640 PF02779 Transketolase, pyrimidine binding domain I635_10645 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) I635_10645 PF00364 Biotin-requiring enzyme I635_10645 PF02817 e3 binding domain I635_10650 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ I635_10655 PF00069 Protein kinase domain I635_10665 PF00132 Bacterial transferase hexapeptide (six repeats) I635_10670 PF00266 Aminotransferase class-V I635_10680 PF13185 GAF domain I635_10690 PF17516 ProQ C-terminal domain I635_10690 PF04352 ProQ/FINO family I635_10695 PF11818 C-terminal domain of tail specific protease (DUF3340) I635_10695 PF17804 Tail specific protease N-terminal domain I635_10695 PF03572 Peptidase family S41 I635_10695 PF00595 PDZ domain I635_10700 PF00209 Sodium:neurotransmitter symporter family I635_10710 PF17432 Domain of unknown function (DUF3458_C) ARM repeats I635_10710 PF11940 Domain of unknown function (DUF3458) Ig-like fold I635_10710 PF01433 Peptidase family M1 domain I635_10725 PF07044 Protein of unknown function (DUF1329) I635_10740 PF05088 Bacterial NAD-glutamate dehydrogenase I635_10745 PF01180 Dihydroorotate dehydrogenase I635_10750 PF02926 THUMP domain I635_10750 PF10672 S-adenosylmethionine-dependent methyltransferase I635_10750 PF01170 Putative RNA methylase family UPF0020 I635_10770 PF04957 Ribosome modulation factor I635_10775 PF07977 FabA-like domain I635_10785 PF03441 FAD binding domain of DNA photolyase I635_10785 PF00875 DNA photolyase I635_10790 PF00875 DNA photolyase I635_10790 PF03441 FAD binding domain of DNA photolyase I635_10795 PF03441 FAD binding domain of DNA photolyase I635_10795 PF00875 DNA photolyase I635_10800 PF04244 Deoxyribodipyrimidine photo-lyase-related protein I635_10815 PF00589 Phage integrase family I635_10815 PF02899 Phage integrase, N-terminal SAM-like domain I635_10825 PF01219 Prokaryotic diacylglycerol kinase I635_10830 PF00582 Universal stress protein family I635_10840 PF01645 Conserved region in glutamate synthase I635_10845 PF00999 Sodium/hydrogen exchanger family I635_10850 PF00210 Ferritin-like domain I635_10855 PF00210 Ferritin-like domain I635_10865 PF00115 Cytochrome C and Quinol oxidase polypeptide I I635_10880 PF13442 Cytochrome C oxidase, cbb3-type, subunit III I635_10880 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP I635_10890 PF00403 Heavy-metal-associated domain I635_10905 PF00027 Cyclic nucleotide-binding domain I635_10905 PF13545 Crp-like helix-turn-helix domain I635_10910 PF00582 Universal stress protein family I635_10915 PF01171 PP-loop family I635_10920 PF01734 Patatin-like phospholipase I635_10940 PF01810 LysE type translocator I635_10945 PF02146 Sir2 family I635_10950 PF00581 Rhodanese-like domain I635_10955 PF08534 Redoxin I635_10965 PF01066 CDP-alcohol phosphatidyltransferase I635_10970 PF01541 GIY-YIG catalytic domain I635_10970 PF02151 UvrB/uvrC motif I635_10970 PF08459 UvrC Helix-hairpin-helix N-terminal I635_10975 PF00196 Bacterial regulatory proteins, luxR family I635_10975 PF00072 Response regulator receiver domain I635_10980 PF00155 Aminotransferase class I and II I635_10995 PF07681 DoxX I635_11000 PF03466 LysR substrate binding domain I635_11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_11015 PF01027 Inhibitor of apoptosis-promoting Bax1 I635_11020 PF02635 DsrE/DsrF-like family I635_11035 PF04358 DsrC like protein I635_11050 PF00593 TonB dependent receptor I635_11050 PF07715 TonB-dependent Receptor Plug Domain I635_11055 PF02403 Seryl-tRNA synthetase N-terminal domain I635_11055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) I635_11060 PF02537 CrcB-like protein, Camphor Resistance (CrcB) I635_11065 PF16193 AAA C-terminal domain I635_11065 PF00004 ATPase family associated with various cellular activities (AAA) I635_11065 PF12002 MgsA AAA+ ATPase C terminal I635_11075 PF01580 FtsK/SpoIIIE family I635_11075 PF17854 FtsK alpha domain I635_11075 PF13491 4TM region of DNA translocase FtsK/SpoIIIE I635_11075 PF09397 Ftsk gamma domain I635_11080 PF01037 Lrp/AsnC ligand binding domain I635_11085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain I635_11085 PF05222 Alanine dehydrogenase/PNT, N-terminal domain I635_11090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family I635_11095 PF18073 Rubredoxin metal binding domain I635_11110 PF00216 Bacterial DNA-binding protein I635_11115 PF00575 S1 RNA binding domain I635_11120 PF02224 Cytidylate kinase I635_11125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) I635_11130 PF00266 Aminotransferase class-V I635_11135 PF03989 DNA gyrase C-terminal domain, beta-propeller I635_11135 PF00521 DNA gyrase/topoisomerase IV, subunit A I635_11145 PF03477 ATP cone domain I635_11145 PF02867 Ribonucleotide reductase, barrel domain I635_11145 PF00317 Ribonucleotide reductase, all-alpha domain I635_11150 PF00268 Ribonucleotide reductase, small chain I635_11155 PF00111 2Fe-2S iron-sulfur cluster binding domain I635_11165 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_11165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family I635_11170 PF03707 Bacterial signalling protein N terminal repeat I635_11170 PF00990 Diguanylate cyclase, GGDEF domain I635_11170 PF00563 EAL domain I635_11175 PF00892 EamA-like transporter family I635_11180 PF01259 SAICAR synthetase I635_11185 PF06804 NlpB/DapX lipoprotein I635_11190 PF00701 Dihydrodipicolinate synthetase family I635_11200 PF00578 AhpC/TSA family I635_11205 PF01594 AI-2E family transporter I635_11210 PF01435 Peptidase family M48 I635_11220 PF03960 ArsC family I635_11225 PF03358 NADPH-dependent FMN reductase I635_11235 PF00308 Bacterial dnaA protein I635_11245 PF00586 AIR synthase related protein, N-terminal domain I635_11245 PF02769 AIR synthase related protein, C-terminal domain I635_11250 PF00551 Formyl transferase I635_11260 PF09317 Domain of unknown function (DUF1974) I635_11260 PF02770 Acyl-CoA dehydrogenase, middle domain I635_11260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I635_11260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_11270 PF00072 Response regulator receiver domain I635_11270 PF00196 Bacterial regulatory proteins, luxR family I635_11275 PF13649 Methyltransferase domain I635_11280 PF08003 Protein of unknown function (DUF1698) I635_11285 PF00485 Phosphoribulokinase / Uridine kinase family I635_11300 PF00128 Alpha amylase, catalytic domain I635_11305 PF13419 Haloacid dehalogenase-like hydrolase I635_11310 PF03453 MoeA N-terminal region (domain I and II) I635_11310 PF00994 Probable molybdopterin binding domain I635_11310 PF03454 MoeA C-terminal region (domain IV) I635_11315 PF01554 MatE I635_11330 PF01434 Peptidase family M41 I635_11330 PF17862 AAA+ lid domain I635_11330 PF00004 ATPase family associated with various cellular activities (AAA) I635_11335 PF00291 Pyridoxal-phosphate dependent enzyme I635_11365 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system I635_11385 PF01548 Transposase I635_11385 PF02371 Transposase IS116/IS110/IS902 family I635_11405 PF02567 Phenazine biosynthesis-like protein I635_11415 PF00378 Enoyl-CoA hydratase/isomerase I635_11430 PF00255 Glutathione peroxidase I635_11435 PF02525 Flavodoxin-like fold I635_11445 PF01053 Cys/Met metabolism PLP-dependent enzyme I635_11460 PF00155 Aminotransferase class I and II I635_11465 PF10459 Peptidase S46 I635_11470 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 I635_11485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I635_11485 PF02770 Acyl-CoA dehydrogenase, middle domain I635_11485 PF12806 Acetyl-CoA dehydrogenase C-terminal like I635_11485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_11490 PF07883 Cupin domain I635_11490 PF12833 Helix-turn-helix domain I635_11495 PF00593 TonB dependent receptor I635_11495 PF07715 TonB-dependent Receptor Plug Domain I635_11505 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) I635_11510 PF00326 Prolyl oligopeptidase family I635_11510 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain I635_11515 PF00873 AcrB/AcrD/AcrF family I635_11520 PF13533 Biotin-lipoyl like I635_11530 PF01012 Electron transfer flavoprotein domain I635_11530 PF00766 Electron transfer flavoprotein FAD-binding domain I635_11535 PF01012 Electron transfer flavoprotein domain I635_11545 PF00816 H-NS histone family I635_11550 PF00561 alpha/beta hydrolase fold I635_11560 PF00258 Flavodoxin I635_11565 PF00672 HAMP domain I635_11565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_11570 PF01475 Ferric uptake regulator family I635_11575 PF01063 Amino-transferase class IV I635_11580 PF02626 Carboxyltransferase domain, subdomain A and B I635_11585 PF02682 Carboxyltransferase domain, subdomain C and D I635_11590 PF03746 LamB/YcsF family I635_11595 PF13509 S1 domain I635_11595 PF17783 CvfB-like winged helix domain I635_11600 PF02566 OsmC-like protein I635_11605 PF13533 Biotin-lipoyl like I635_11610 PF00873 AcrB/AcrD/AcrF family I635_11615 PF00873 AcrB/AcrD/AcrF family I635_11630 PF00155 Aminotransferase class I and II I635_11650 PF00034 Cytochrome c I635_11650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III I635_11650 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase I635_11655 PF00111 2Fe-2S iron-sulfur cluster binding domain I635_11655 PF01799 [2Fe-2S] binding domain I635_11680 PF12146 Serine aminopeptidase, S33 I635_11685 PF12833 Helix-turn-helix domain I635_11685 PF06719 AraC-type transcriptional regulator N-terminus I635_11700 PF13286 Phosphohydrolase-associated domain I635_11700 PF01966 HD domain I635_11705 PF00174 Oxidoreductase molybdopterin binding domain I635_11710 PF01794 Ferric reductase like transmembrane component I635_11725 PF02810 SEC-C motif I635_11730 PF08240 Alcohol dehydrogenase GroES-like domain I635_11730 PF00107 Zinc-binding dehydrogenase I635_11740 PF02770 Acyl-CoA dehydrogenase, middle domain I635_11740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_11740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I635_11750 PF07715 TonB-dependent Receptor Plug Domain I635_11750 PF00593 TonB dependent receptor I635_11770 PF04055 Radical SAM superfamily I635_11770 PF06969 HemN C-terminal domain I635_11775 PF03459 TOBE domain I635_11775 PF00005 ABC transporter I635_11780 PF00528 Binding-protein-dependent transport system inner membrane component I635_11790 PF02391 MoaE protein I635_11795 PF02597 ThiS family I635_11800 PF01967 MoaC family I635_11805 PF00994 Probable molybdopterin binding domain I635_11810 PF00899 ThiF family I635_11820 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system I635_11825 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system I635_11840 PF00155 Aminotransferase class I and II I635_11845 PF03435 Saccharopine dehydrogenase NADP binding domain I635_11850 PF00155 Aminotransferase class I and II I635_11865 PF01717 Cobalamin-independent synthase, Catalytic domain I635_11865 PF08267 Cobalamin-independent synthase, N-terminal domain I635_11870 PF07715 TonB-dependent Receptor Plug Domain I635_11870 PF00593 TonB dependent receptor I635_11880 PF00892 EamA-like transporter family I635_11895 PF13538 UvrD-like helicase C-terminal domain I635_11900 PF12705 PD-(D/E)XK nuclease superfamily I635_11900 PF00580 UvrD/REP helicase N-terminal domain I635_11900 PF13361 UvrD-like helicase C-terminal domain I635_11905 PF17946 RecC C-terminal domain I635_11925 PF00501 AMP-binding enzyme I635_11930 PF00563 EAL domain I635_11930 PF00990 Diguanylate cyclase, GGDEF domain I635_11930 PF01590 GAF domain I635_11930 PF00360 Phytochrome region I635_11935 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain I635_11935 PF17770 Ribonuclease J C-terminal domain I635_11935 PF12706 Beta-lactamase superfamily domain I635_11950 PF03466 LysR substrate binding domain I635_11950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_11970 PF01022 Bacterial regulatory protein, arsR family I635_11980 PF03466 LysR substrate binding domain I635_11980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_11990 PF00158 Sigma-54 interaction domain I635_11990 PF00072 Response regulator receiver domain I635_11990 PF02954 Bacterial regulatory protein, Fis family I635_12000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_12000 PF00512 His Kinase A (phospho-acceptor) domain I635_12000 PF08446 PAS fold I635_12000 PF00360 Phytochrome region I635_12000 PF01590 GAF domain I635_12005 PF00072 Response regulator receiver domain I635_12010 PF00512 His Kinase A (phospho-acceptor) domain I635_12010 PF00072 Response regulator receiver domain I635_12010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_12010 PF09308 LuxQ, periplasmic I635_12040 PF07043 Protein of unknown function (DUF1328) I635_12060 PF07023 Protein of unknown function (DUF1315) I635_12075 PF01235 Sodium:alanine symporter family I635_12080 PF18027 Cytosolic carboxypeptidase N-terminal domain I635_12080 PF00246 Zinc carboxypeptidase I635_12085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I635_12085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain I635_12095 PF01641 SelR domain I635_12100 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain I635_12100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase I635_12105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) I635_12105 PF00128 Alpha amylase, catalytic domain I635_12110 PF00128 Alpha amylase, catalytic domain I635_12110 PF02806 Alpha amylase, C-terminal all-beta domain I635_12110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) I635_12115 PF02446 4-alpha-glucanotransferase I635_12120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I635_12120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain I635_12125 PF01263 Aldose 1-epimerase I635_12130 PF01081 KDPG and KHG aldolase I635_12135 PF02685 Glucokinase I635_12140 PF00920 Dehydratase family I635_12145 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase I635_12150 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain I635_12150 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain I635_12155 PF01418 Helix-turn-helix domain, rpiR family I635_12155 PF01380 SIS domain I635_12160 PF00224 Pyruvate kinase, barrel domain I635_12160 PF02887 Pyruvate kinase, alpha/beta domain I635_12165 PF07969 Amidohydrolase family I635_12170 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term I635_12170 PF12833 Helix-turn-helix domain I635_12175 PF02770 Acyl-CoA dehydrogenase, middle domain I635_12175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_12175 PF12806 Acetyl-CoA dehydrogenase C-terminal like I635_12175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I635_12180 PF01012 Electron transfer flavoprotein domain I635_12185 PF01012 Electron transfer flavoprotein domain I635_12185 PF00766 Electron transfer flavoprotein FAD-binding domain I635_12195 PF02080 TrkA-C domain I635_12195 PF03600 Citrate transporter I635_12205 PF01081 KDPG and KHG aldolase I635_12210 PF02685 Glucokinase I635_12215 PF00920 Dehydratase family I635_12220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase I635_12225 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain I635_12225 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain I635_12230 PF01418 Helix-turn-helix domain, rpiR family I635_12230 PF01380 SIS domain I635_12235 PF00224 Pyruvate kinase, barrel domain I635_12235 PF02887 Pyruvate kinase, alpha/beta domain I635_12240 PF01048 Phosphorylase superfamily I635_12260 PF04972 BON domain I635_12290 PF09347 Domain of unknown function (DUF1989) I635_12330 PF04231 Endonuclease I I635_12335 PF02743 Cache domain I635_12335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_12335 PF00672 HAMP domain I635_12350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_12350 PF03466 LysR substrate binding domain I635_12355 PF00465 Iron-containing alcohol dehydrogenase I635_12360 PF00990 Diguanylate cyclase, GGDEF domain I635_12360 PF03707 Bacterial signalling protein N terminal repeat I635_12360 PF00563 EAL domain I635_12370 PF11849 Domain of unknown function (DUF3369) I635_12375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_12375 PF00497 Bacterial extracellular solute-binding proteins, family 3 I635_12375 PF00512 His Kinase A (phospho-acceptor) domain I635_12395 PF00145 C-5 cytosine-specific DNA methylase I635_12465 PF00939 Sodium:sulfate symporter transmembrane region I635_12470 PF00692 dUTPase I635_12475 PF10609 NUBPL iron-transfer P-loop NTPase I635_12480 PF08264 Anticodon-binding domain of tRNA I635_12480 PF09334 tRNA synthetases class I (M) I635_12480 PF01588 Putative tRNA binding domain I635_12485 PF00924 Mechanosensitive ion channel I635_12485 PF05552 Conserved TM helix I635_12490 PF08241 Methyltransferase domain I635_12495 PF00753 Metallo-beta-lactamase superfamily I635_12495 PF16123 Hydroxyacylglutathione hydrolase C-terminus I635_12500 PF01464 Transglycosylase SLT domain I635_12500 PF01476 LysM domain I635_12525 PF09190 DALR domain I635_12525 PF01406 tRNA synthetases class I (C) catalytic domain I635_12530 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD I635_12535 PF00149 Calcineurin-like phosphoesterase I635_12545 PF15975 Flotillin I635_12545 PF01145 SPFH domain / Band 7 family I635_12555 PF00128 Alpha amylase, catalytic domain I635_12560 PF01638 HxlR-like helix-turn-helix I635_12565 PF08240 Alcohol dehydrogenase GroES-like domain I635_12565 PF00107 Zinc-binding dehydrogenase I635_12570 PF06628 Catalase-related immune-responsive I635_12570 PF18011 C-terminal domain found in long catalases I635_12570 PF00199 Catalase I635_12575 PF00107 Zinc-binding dehydrogenase I635_12575 PF08240 Alcohol dehydrogenase GroES-like domain I635_12580 PF03466 LysR substrate binding domain I635_12580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_12605 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) I635_12615 PF00156 Phosphoribosyl transferase domain I635_12620 PF02674 Colicin V production protein I635_12625 PF05036 Sporulation related domain I635_12630 PF02875 Mur ligase family, glutamate ligase domain I635_12630 PF08245 Mur ligase middle domain I635_12635 PF17848 Acetyl-coA carboxylase zinc finger domain I635_12635 PF01039 Carboxyl transferase domain I635_12640 PF01416 tRNA pseudouridine synthase I635_12650 PF01118 Semialdehyde dehydrogenase, NAD binding domain I635_12650 PF02774 Semialdehyde dehydrogenase, dimerisation domain I635_12655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain I635_12655 PF11890 Domain of unknown function (DUF3410) I635_12655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain I635_12660 PF00596 Class II Aldolase and Adducin N-terminal domain I635_12675 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH I635_12680 PF00144 Beta-lactamase I635_12685 PF02801 Beta-ketoacyl synthase, C-terminal domain I635_12685 PF00109 Beta-ketoacyl synthase, N-terminal domain I635_12690 PF13193 AMP-binding enzyme C-terminal domain I635_12690 PF00501 AMP-binding enzyme I635_12700 PF01266 FAD dependent oxidoreductase I635_12700 PF05430 S-adenosyl-L-methionine-dependent methyltransferase I635_12735 PF13411 MerR HTH family regulatory protein I635_12740 PF00107 Zinc-binding dehydrogenase I635_12740 PF08240 Alcohol dehydrogenase GroES-like domain I635_12770 PF00005 ABC transporter I635_12775 PF02667 Short chain fatty acid transporter I635_12780 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) I635_12780 PF00072 Response regulator receiver domain I635_12780 PF01627 Hpt domain I635_12780 PF00512 His Kinase A (phospho-acceptor) domain I635_12780 PF00672 HAMP domain I635_12780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_12785 PF02627 Carboxymuconolactone decarboxylase family I635_12790 PF05193 Peptidase M16 inactive domain I635_12790 PF00675 Insulinase (Peptidase family M16) I635_12805 PF04315 Elongation factor P hydroxylase I635_12835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family I635_12835 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_12840 PF00378 Enoyl-CoA hydratase/isomerase I635_12845 PF00440 Bacterial regulatory proteins, tetR family I635_12845 PF02909 Tetracyclin repressor-like, C-terminal domain I635_12850 PF05199 GMC oxidoreductase I635_12850 PF00732 GMC oxidoreductase I635_12860 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain I635_12860 PF06974 Protein of unknown function (DUF1298) I635_12870 PF04286 Protein of unknown function (DUF445) I635_12895 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain I635_12895 PF00326 Prolyl oligopeptidase family I635_12900 PF00392 Bacterial regulatory proteins, gntR family I635_12900 PF07840 FadR C-terminal domain I635_12905 PF06450 Bacterial Na+/H+ antiporter B (NhaB) I635_12910 PF02600 Disulfide bond formation protein DsbB I635_12915 PF13302 Acetyltransferase (GNAT) domain I635_12925 PF03692 Putative zinc- or iron-chelating domain I635_12930 PF01557 Fumarylacetoacetate (FAA) hydrolase family I635_12940 PF05166 YcgL domain I635_12945 PF01612 3'-5' exonuclease I635_12945 PF00570 HRDC domain I635_12950 PF13193 AMP-binding enzyme C-terminal domain I635_12950 PF00501 AMP-binding enzyme I635_12955 PF12697 Alpha/beta hydrolase family I635_12970 PF00814 Glycoprotease family I635_12975 PF13307 Helicase C-terminal domain I635_12975 PF06733 DEAD_2 I635_13000 PF00128 Alpha amylase, catalytic domain I635_13025 PF00593 TonB dependent receptor I635_13025 PF07715 TonB-dependent Receptor Plug Domain I635_13035 PF01634 ATP phosphoribosyltransferase I635_13035 PF08029 HisG, C-terminal domain I635_13040 PF00815 Histidinol dehydrogenase I635_13045 PF00155 Aminotransferase class I and II I635_13050 PF00475 Imidazoleglycerol-phosphate dehydratase I635_13055 PF00117 Glutamine amidotransferase class-I I635_13060 PF00977 Histidine biosynthesis protein I635_13065 PF00977 Histidine biosynthesis protein I635_13070 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase I635_13070 PF01502 Phosphoribosyl-AMP cyclohydrolase I635_13085 PF01226 Formate/nitrite transporter I635_13090 PF05193 Peptidase M16 inactive domain I635_13090 PF00675 Insulinase (Peptidase family M16) I635_13095 PF10502 Signal peptidase, peptidase S26 I635_13100 PF07715 TonB-dependent Receptor Plug Domain I635_13100 PF00593 TonB dependent receptor I635_13120 PF05191 Adenylate kinase, active site lid I635_13125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_13125 PF00183 Hsp90 protein I635_13130 PF02132 RecR protein I635_13130 PF13662 Toprim domain I635_13145 PF02575 YbaB/EbfC DNA-binding family I635_13150 PF12169 DNA polymerase III subunits gamma and tau domain III I635_13150 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding I635_13150 PF12170 DNA polymerase III tau subunit V interacting with alpha I635_13155 PF00156 Phosphoribosyl transferase domain I635_13165 PF05114 Protein of unknown function (DUF692) I635_13175 PF12704 MacB-like periplasmic core domain I635_13175 PF02687 FtsX-like permease family I635_13175 PF00005 ABC transporter I635_13185 PF00990 Diguanylate cyclase, GGDEF domain I635_13185 PF00360 Phytochrome region I635_13185 PF01590 GAF domain I635_13185 PF00563 EAL domain I635_13190 PF01066 CDP-alcohol phosphatidyltransferase I635_13210 PF09330 D-lactate dehydrogenase, membrane binding I635_13210 PF01565 FAD binding domain I635_13215 PF10431 C-terminal, D2-small domain, of ClpB protein I635_13215 PF02861 Clp amino terminal domain, pathogenicity island component I635_13215 PF07724 AAA domain (Cdc48 subfamily) I635_13215 PF17871 AAA lid domain I635_13215 PF00004 ATPase family associated with various cellular activities (AAA) I635_13225 PF01479 S4 domain I635_13225 PF00849 RNA pseudouridylate synthase I635_13230 PF13525 Outer membrane lipoprotein I635_13240 PF04542 Sigma-70 region 2 I635_13240 PF04545 Sigma-70, region 4 I635_13255 PF00106 short chain dehydrogenase I635_13275 PF00691 OmpA family I635_13275 PF13677 Membrane MotB of proton-channel complex MotA/MotB I635_13280 PF01618 MotA/TolQ/ExbB proton channel family I635_13285 PF02609 Exonuclease VII small subunit I635_13290 PF00348 Polyprenyl synthetase I635_13295 PF02779 Transketolase, pyrimidine binding domain I635_13295 PF13292 1-deoxy-D-xylulose-5-phosphate synthase I635_13295 PF02780 Transketolase, C-terminal domain I635_13300 PF04608 Phosphatidylglycerophosphatase A I635_13305 PF02769 AIR synthase related protein, C-terminal domain I635_13305 PF00586 AIR synthase related protein, N-terminal domain I635_13310 PF01029 NusB family I635_13315 PF00885 6,7-dimethyl-8-ribityllumazine synthase I635_13320 PF00925 GTP cyclohydrolase II I635_13320 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase I635_13325 PF00677 Lumazine binding domain I635_13330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region I635_13330 PF01872 RibD C-terminal domain I635_13335 PF03477 ATP cone domain I635_13340 PF00464 Serine hydroxymethyltransferase I635_13350 PF00005 ABC transporter I635_13350 PF12848 ABC transporter I635_13360 PF18073 Rubredoxin metal binding domain I635_13370 PF18429 Domain of unknown function (DUF5609) I635_13380 PF01026 TatD related DNase I635_13385 PF01243 Pyridoxamine 5'-phosphate oxidase I635_13385 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region I635_13390 PF01926 50S ribosome-binding GTPase I635_13390 PF07650 KH domain I635_13395 PF00035 Double-stranded RNA binding motif I635_13395 PF14622 Ribonuclease-III-like I635_13400 PF10502 Signal peptidase, peptidase S26 I635_13405 PF00009 Elongation factor Tu GTP binding domain I635_13405 PF06421 GTP-binding protein LepA C-terminus I635_13405 PF03144 Elongation factor Tu domain 2 I635_13405 PF00679 Elongation factor G C-terminus I635_13415 PF03888 MucB/RseB N-terminal domain I635_13415 PF17188 MucB/RseB C-terminal domain I635_13425 PF08281 Sigma-70, region 4 I635_13425 PF04542 Sigma-70 region 2 I635_13430 PF02910 Fumarate reductase flavoprotein C-term I635_13430 PF00890 FAD binding domain I635_13445 PF03937 Flavinator of succinate dehydrogenase I635_13455 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase I635_13460 PF00543 Nitrogen regulatory protein P-II I635_13465 PF02540 NAD synthase I635_13500 PF00114 Pilin (bacterial filament) I635_13500 PF07963 Prokaryotic N-terminal methylation motif I635_13525 PF02401 LytB protein I635_13530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase I635_13535 PF01252 Signal peptidase (SPase) II I635_13540 PF08264 Anticodon-binding domain of tRNA I635_13540 PF06827 Zinc finger found in FPG and IleRS I635_13540 PF00133 tRNA synthetases class I (I, L, M and V) I635_13545 PF01687 Riboflavin kinase I635_13545 PF06574 FAD synthetase I635_13550 PF03023 Lipid II flippase MurJ I635_13555 PF01649 Ribosomal protein S20 I635_13560 PF00106 short chain dehydrogenase I635_13575 PF01758 Sodium Bile acid symporter family I635_13595 PF01546 Peptidase family M20/M25/M40 I635_13595 PF07687 Peptidase dimerisation domain I635_13605 PF13145 PPIC-type PPIASE domain I635_13610 PF00216 Bacterial DNA-binding protein I635_13620 PF05362 Lon protease (S16) C-terminal proteolytic domain I635_13620 PF00004 ATPase family associated with various cellular activities (AAA) I635_13620 PF02190 ATP-dependent protease La (LON) substrate-binding domain I635_13625 PF10431 C-terminal, D2-small domain, of ClpB protein I635_13625 PF07724 AAA domain (Cdc48 subfamily) I635_13625 PF06689 ClpX C4-type zinc finger I635_13630 PF00574 Clp protease I635_13635 PF05698 Bacterial trigger factor protein (TF) C-terminus I635_13635 PF05697 Bacterial trigger factor protein (TF) I635_13635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase I635_13640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain I635_13640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain I635_13650 PF18389 TrmO C-terminal domain I635_13650 PF01980 tRNA-methyltransferase O I635_13655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) I635_13655 PF03129 Anticodon binding domain I635_13660 PF12706 Beta-lactamase superfamily domain I635_13660 PF00753 Metallo-beta-lactamase superfamily I635_13665 PF02253 Phospholipase A1 I635_13670 PF00850 Histone deacetylase domain I635_13675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_13675 PF00672 HAMP domain I635_13680 PF00117 Glutamine amidotransferase class-I I635_13680 PF02540 NAD synthase I635_13680 PF00958 GMP synthase C terminal domain I635_13685 PF00478 IMP dehydrogenase / GMP reductase domain I635_13685 PF00571 CBS domain I635_13690 PF13742 OB-fold nucleic acid binding domain I635_13690 PF02601 Exonuclease VII, large subunit I635_13705 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal I635_13705 PF01926 50S ribosome-binding GTPase I635_13710 PF13360 PQQ-like domain I635_13715 PF09976 Tetratricopeptide repeat-like domain I635_13720 PF03129 Anticodon binding domain I635_13720 PF13393 Histidyl-tRNA synthetase I635_13725 PF04551 GcpE protein I635_13730 PF13464 Domain of unknown function (DUF4115) I635_13740 PF04055 Radical SAM superfamily I635_13745 PF00334 Nucleoside diphosphate kinase I635_13750 PF02657 Fe-S metabolism associated domain I635_13755 PF01883 Iron-sulfur cluster assembly protein I635_13760 PF01521 Iron-sulphur cluster biosynthesis I635_13765 PF00266 Aminotransferase class-V I635_13770 PF01458 Uncharacterized protein family (UPF0051) I635_13775 PF00005 ABC transporter I635_13780 PF01458 Uncharacterized protein family (UPF0051) I635_13785 PF00266 Aminotransferase class-V I635_13790 PF02082 Transcriptional regulator I635_13795 PF00743 Flavin-binding monooxygenase-like I635_13800 PF00132 Bacterial transferase hexapeptide (six repeats) I635_13800 PF06426 Serine acetyltransferase, N-terminal I635_13805 PF00588 SpoU rRNA Methylase family I635_13810 PF00459 Inositol monophosphatase family I635_13825 PF07549 SecD/SecF GG Motif I635_13825 PF02355 Protein export membrane protein I635_13830 PF07549 SecD/SecF GG Motif I635_13830 PF13721 SecD export protein N-terminal TM region I635_13830 PF02355 Protein export membrane protein I635_13835 PF02699 Preprotein translocase subunit I635_13840 PF01702 Queuine tRNA-ribosyltransferase I635_13845 PF02547 Queuosine biosynthesis protein I635_13860 PF04012 PspA/IM30 family I635_13865 PF07885 Ion channel I635_13880 PF06693 Protein of unknown function (DUF1190) I635_13885 PF03738 Glutathionylspermidine synthase preATP-grasp I635_13900 PF00005 ABC transporter I635_13915 PF04960 Glutaminase I635_13920 PF00245 Alkaline phosphatase I635_13925 PF00072 Response regulator receiver domain I635_13930 PF00463 Isocitrate lyase family I635_13935 PF03466 LysR substrate binding domain I635_13935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_13940 PF01274 Malate synthase I635_13950 PF01370 NAD dependent epimerase/dehydratase family I635_13975 PF13180 PDZ domain I635_13975 PF17820 PDZ domain I635_13995 PF13439 Glycosyltransferase Family 4 I635_13995 PF00534 Glycosyl transferases group 1 I635_14015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain I635_14015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain I635_14015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain I635_14020 PF02350 UDP-N-acetylglucosamine 2-epimerase I635_14050 PF01757 Acyltransferase family I635_14055 PF13537 Glutamine amidotransferase domain I635_14055 PF00733 Asparagine synthase I635_14060 PF00862 Sucrose synthase I635_14060 PF00534 Glycosyl transferases group 1 I635_14070 PF01943 Polysaccharide biosynthesis protein I635_14100 PF13537 Glutamine amidotransferase domain I635_14100 PF00733 Asparagine synthase I635_14115 PF01522 Polysaccharide deacetylase I635_14120 PF02397 Bacterial sugar transferase I635_14135 PF13614 AAA domain I635_14145 PF13401 AAA domain I635_14145 PF01471 Putative peptidoglycan binding domain I635_14160 PF01541 GIY-YIG catalytic domain I635_14175 PF08335 GlnD PII-uridylyltransferase I635_14175 PF03710 Glutamate-ammonia ligase adenylyltransferase I635_14205 PF03279 Bacterial lipid A biosynthesis acyltransferase I635_14220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_14220 PF02770 Acyl-CoA dehydrogenase, middle domain I635_14220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I635_14220 PF09317 Domain of unknown function (DUF1974) I635_14225 PF00593 TonB dependent receptor I635_14225 PF04886 PT repeat I635_14225 PF07715 TonB-dependent Receptor Plug Domain I635_14235 PF00990 Diguanylate cyclase, GGDEF domain I635_14235 PF03707 Bacterial signalling protein N terminal repeat I635_14235 PF13188 PAS domain I635_14235 PF00563 EAL domain I635_14240 PF00265 Thymidine kinase I635_14250 PF00356 Bacterial regulatory proteins, lacI family I635_14285 PF01926 50S ribosome-binding GTPase I635_14290 PF08032 RNA 2'-O ribose methyltransferase substrate binding I635_14290 PF00588 SpoU rRNA Methylase family I635_14295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain I635_14295 PF00378 Enoyl-CoA hydratase/isomerase I635_14295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain I635_14310 PF00171 Aldehyde dehydrogenase family I635_14315 PF00732 GMC oxidoreductase I635_14315 PF05199 GMC oxidoreductase I635_14330 PF05971 RNA methyltransferase I635_14355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_14355 PF02770 Acyl-CoA dehydrogenase, middle domain I635_14355 PF18158 Adaptive response protein AidB N-terminal domain I635_14385 PF00072 Response regulator receiver domain I635_14385 PF00486 Transcriptional regulatory protein, C terminal I635_14390 PF00512 His Kinase A (phospho-acceptor) domain I635_14390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_14390 PF00672 HAMP domain I635_14390 PF16527 Two-component sensor protein CpxA, periplasmic domain I635_14400 PF03965 Penicillinase repressor I635_14405 PF03544 Gram-negative bacterial TonB protein C-terminal I635_14420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily I635_14430 PF01799 [2Fe-2S] binding domain I635_14430 PF00111 2Fe-2S iron-sulfur cluster binding domain I635_14435 PF00941 FAD binding domain in molybdopterin dehydrogenase I635_14435 PF03450 CO dehydrogenase flavoprotein C-terminal domain I635_14440 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase I635_14440 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I635_14465 PF00106 short chain dehydrogenase I635_14470 PF01965 DJ-1/PfpI family I635_14475 PF03631 Virulence factor BrkB I635_14485 PF07152 YaeQ protein I635_14515 PF07690 Major Facilitator Superfamily I635_14530 PF16124 RecQ zinc-binding I635_14530 PF09382 RQC domain I635_14530 PF00270 DEAD/DEAH box helicase I635_14530 PF00570 HRDC domain I635_14530 PF00271 Helicase conserved C-terminal domain I635_14550 PF00072 Response regulator receiver domain I635_14550 PF00672 HAMP domain I635_14550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_14550 PF00512 His Kinase A (phospho-acceptor) domain I635_14550 PF01627 Hpt domain I635_14550 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) I635_14560 PF00360 Phytochrome region I635_14560 PF01590 GAF domain I635_14560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_14560 PF00512 His Kinase A (phospho-acceptor) domain I635_14560 PF08446 PAS fold I635_14565 PF07995 Glucose / Sorbosone dehydrogenase I635_14570 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH I635_14580 PF00486 Transcriptional regulatory protein, C terminal I635_14580 PF00072 Response regulator receiver domain I635_14585 PF00512 His Kinase A (phospho-acceptor) domain I635_14585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_14585 PF00989 PAS fold I635_14585 PF11808 Phosphate regulon sensor protein PhoR I635_14605 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I635_14605 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain I635_14610 PF14760 Rnk N-terminus I635_14610 PF01272 Transcription elongation factor, GreA/GreB, C-term I635_14620 PF02599 Global regulator protein family I635_14625 PF01145 SPFH domain / Band 7 family I635_14645 PF10431 C-terminal, D2-small domain, of ClpB protein I635_14645 PF07724 AAA domain (Cdc48 subfamily) I635_14670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I635_14670 PF00403 Heavy-metal-associated domain I635_14670 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_14675 PF00403 Heavy-metal-associated domain I635_14680 PF02411 MerT mercuric transport protein I635_14685 PF13411 MerR HTH family regulatory protein I635_14715 PF00873 AcrB/AcrD/AcrF family I635_14720 PF07715 TonB-dependent Receptor Plug Domain I635_14720 PF07660 Secretin and TonB N terminus short domain I635_14720 PF00593 TonB dependent receptor I635_14725 PF00873 AcrB/AcrD/AcrF family I635_14745 PF16916 Dimerisation domain of Zinc Transporter I635_14745 PF01545 Cation efflux family I635_14755 PF01545 Cation efflux family I635_14760 PF00384 Molybdopterin oxidoreductase I635_14760 PF01568 Molydopterin dinucleotide binding domain I635_14765 PF13007 Transposase C of IS166 homeodomain I635_14765 PF13817 IS66 C-terminal element I635_14765 PF13005 zinc-finger binding domain of transposase IS66 I635_14765 PF03050 Transposase IS66 family I635_14780 PF00970 Oxidoreductase FAD-binding domain I635_14780 PF00042 Globin I635_14780 PF00175 Oxidoreductase NAD-binding domain I635_14785 PF01590 GAF domain I635_14785 PF00158 Sigma-54 interaction domain I635_14805 PF01597 Glycine cleavage H-protein I635_14810 PF08669 Glycine cleavage T-protein C-terminal barrel domain I635_14810 PF01571 Aminomethyltransferase folate-binding domain I635_14815 PF01979 Amidohydrolase family I635_14820 PF01869 BadF/BadG/BcrA/BcrD ATPase family I635_14825 PF03466 LysR substrate binding domain I635_14825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_14830 PF02652 L-lactate permease I635_14840 PF00557 Metallopeptidase family M24 I635_14840 PF01321 Creatinase/Prolidase N-terminal domain I635_14855 PF01494 FAD binding domain I635_14860 PF01494 FAD binding domain I635_14865 PF05195 Aminopeptidase P, N-terminal domain I635_14865 PF00557 Metallopeptidase family M24 I635_14870 PF03695 Uncharacterised protein family (UPF0149) I635_14875 PF00294 pfkB family carbohydrate kinase I635_14880 PF01156 Inosine-uridine preferring nucleoside hydrolase I635_14885 PF00512 His Kinase A (phospho-acceptor) domain I635_14885 PF01627 Hpt domain I635_14885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_14885 PF00072 Response regulator receiver domain I635_14885 PF00497 Bacterial extracellular solute-binding proteins, family 3 I635_14885 PF00989 PAS fold I635_14890 PF01812 5-formyltetrahydrofolate cyclo-ligase family I635_14895 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) I635_14900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain I635_14900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain I635_14900 PF01842 ACT domain I635_14920 PF06945 Protein of unknown function (DUF1289) I635_14930 PF00873 AcrB/AcrD/AcrF family I635_14935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion I635_14940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_14940 PF03466 LysR substrate binding domain I635_14950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I635_14950 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_14955 PF02817 e3 binding domain I635_14955 PF00364 Biotin-requiring enzyme I635_14955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) I635_14960 PF00456 Transketolase, thiamine diphosphate binding domain I635_14960 PF17831 Pyruvate dehydrogenase E1 component middle domain I635_14965 PF07729 FCD domain I635_14965 PF00392 Bacterial regulatory proteins, gntR family I635_14975 PF01510 N-acetylmuramoyl-L-alanine amidase I635_14985 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain I635_14985 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain I635_14995 PF00482 Type II secretion system (T2SS), protein F I635_15000 PF01478 Type IV leader peptidase family I635_15000 PF06750 Bacterial Peptidase A24 N-terminal domain I635_15005 PF01121 Dephospho-CoA kinase I635_15010 PF07072 Cell division protein I635_15020 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family I635_15025 PF00293 NUDIX domain I635_15030 PF07516 SecA Wing and Scaffold domain I635_15030 PF01043 SecA preprotein cross-linking domain I635_15030 PF02810 SEC-C motif I635_15030 PF07517 SecA DEAD-like domain I635_15035 PF01476 LysM domain I635_15035 PF01551 Peptidase family M23 I635_15035 PF08525 Opacity-associated protein A N-terminal motif I635_15040 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase I635_15045 PF12327 FtsZ family, C-terminal domain I635_15045 PF00091 Tubulin/FtsZ family, GTPase domain I635_15050 PF02491 SHS2 domain inserted in FTSA I635_15055 PF08478 POTRA domain, FtsQ-type I635_15055 PF03799 Cell division protein FtsQ I635_15060 PF01820 D-ala D-ala ligase N-terminus I635_15060 PF07478 D-ala D-ala ligase C-terminus I635_15065 PF02875 Mur ligase family, glutamate ligase domain I635_15065 PF01225 Mur ligase family, catalytic domain I635_15065 PF08245 Mur ligase middle domain I635_15070 PF04101 Glycosyltransferase family 28 C-terminal domain I635_15070 PF03033 Glycosyltransferase family 28 N-terminal domain I635_15075 PF01098 Cell cycle protein I635_15080 PF02875 Mur ligase family, glutamate ligase domain I635_15080 PF08245 Mur ligase middle domain I635_15085 PF00953 Glycosyl transferase family 4 I635_15085 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 I635_15090 PF01225 Mur ligase family, catalytic domain I635_15090 PF08245 Mur ligase middle domain I635_15090 PF02875 Mur ligase family, glutamate ligase domain I635_15095 PF01225 Mur ligase family, catalytic domain I635_15095 PF02875 Mur ligase family, glutamate ligase domain I635_15095 PF08245 Mur ligase middle domain I635_15100 PF00905 Penicillin binding protein transpeptidase domain I635_15100 PF03717 Penicillin-binding Protein dimerisation domain I635_15105 PF04999 Cell division protein FtsL I635_15110 PF01795 MraW methylase family I635_15115 PF02381 MraZ protein, putative antitoxin-like I635_15165 PF00462 Glutaredoxin I635_15165 PF08534 Redoxin I635_15170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain I635_15180 PF00990 Diguanylate cyclase, GGDEF domain I635_15180 PF17158 Membrane-associated sensor, integral membrane domain I635_15190 PF00158 Sigma-54 interaction domain I635_15190 PF02954 Bacterial regulatory protein, Fis family I635_15190 PF00072 Response regulator receiver domain I635_15195 PF00512 His Kinase A (phospho-acceptor) domain I635_15195 PF09456 RcsC Alpha-Beta-Loop (ABL) I635_15195 PF00072 Response regulator receiver domain I635_15195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_15200 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal I635_15200 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III I635_15225 PF05552 Conserved TM helix I635_15225 PF00924 Mechanosensitive ion channel I635_15230 PF04452 RNA methyltransferase I635_15235 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain I635_15235 PF02951 Prokaryotic glutathione synthetase, N-terminal domain I635_15240 PF02622 Uncharacterized ACR, COG1678 I635_15245 PF03652 Holliday junction resolvase I635_15255 PF00437 Type II/IV secretion system protein I635_15260 PF00437 Type II/IV secretion system protein I635_15265 PF01168 Alanine racemase, N-terminal domain I635_15270 PF03807 NADP oxidoreductase coenzyme F420-dependent I635_15270 PF14748 Pyrroline-5-carboxylate reductase dimerisation I635_15275 PF02325 YGGT family I635_15285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family I635_15285 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_15300 PF02798 Glutathione S-transferase, N-terminal domain I635_15300 PF14834 Glutathione S-transferase, C-terminal domain I635_15305 PF00080 Copper/zinc superoxide dismutase (SODC) I635_15310 PF02566 OsmC-like protein I635_15315 PF01625 Peptide methionine sulfoxide reductase I635_15330 PF03591 AzlC protein I635_15340 PF07690 Major Facilitator Superfamily I635_15345 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) I635_15350 PF03883 Peroxide stress protein YaaA I635_15365 PF00923 Transaldolase/Fructose-6-phosphate aldolase I635_15370 PF00342 Phosphoglucose isomerase I635_15380 PF03167 Uracil DNA glycosylase superfamily I635_15385 PF00291 Pyridoxal-phosphate dependent enzyme I635_15385 PF14821 Threonine synthase N terminus I635_15390 PF08544 GHMP kinases C terminal I635_15390 PF00288 GHMP kinases N terminal domain I635_15395 PF01842 ACT domain I635_15395 PF03447 Homoserine dehydrogenase, NAD binding domain I635_15395 PF00696 Amino acid kinase family I635_15395 PF13840 ACT domain I635_15395 PF00742 Homoserine dehydrogenase I635_15400 PF17755 UvrA DNA-binding domain I635_15405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_15405 PF03466 LysR substrate binding domain I635_15410 PF08240 Alcohol dehydrogenase GroES-like domain I635_15410 PF00107 Zinc-binding dehydrogenase I635_15420 PF01022 Bacterial regulatory protein, arsR family I635_15430 PF03358 NADPH-dependent FMN reductase I635_15435 PF01758 Sodium Bile acid symporter family I635_15440 PF01339 CheB methylesterase I635_15440 PF00072 Response regulator receiver domain I635_15445 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) I635_15450 PF00072 Response regulator receiver domain I635_15450 PF00486 Transcriptional regulatory protein, C terminal I635_15455 PF00672 HAMP domain I635_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_15455 PF00512 His Kinase A (phospho-acceptor) domain I635_15480 PF00962 Adenosine/AMP deaminase I635_15485 PF04116 Fatty acid hydroxylase superfamily I635_15510 PF03435 Saccharopine dehydrogenase NADP binding domain I635_15510 PF16653 Saccharopine dehydrogenase C-terminal domain I635_15515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain I635_15525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases I635_15530 PF04348 LppC putative lipoprotein I635_15535 PF02021 Uncharacterised protein family UPF0102 I635_15540 PF00534 Glycosyl transferases group 1 I635_15545 PF13580 SIS domain I635_15550 PF04972 BON domain I635_15555 PF07690 Major Facilitator Superfamily I635_15565 PF00893 Small Multidrug Resistance protein I635_15570 PF07730 Histidine kinase I635_15575 PF00196 Bacterial regulatory proteins, luxR family I635_15575 PF00072 Response regulator receiver domain I635_15590 PF00593 TonB dependent receptor I635_15590 PF07715 TonB-dependent Receptor Plug Domain I635_15605 PF00285 Citrate synthase, C-terminal domain I635_15610 PF00330 Aconitase family (aconitate hydratase) I635_15610 PF00694 Aconitase C-terminal domain I635_15615 PF04303 PrpF protein I635_15620 PF00990 Diguanylate cyclase, GGDEF domain I635_15625 PF00480 ROK family I635_15630 PF13660 Domain of unknown function (DUF4147) I635_15630 PF05161 MOFRL family I635_15635 PF00474 Sodium:solute symporter family I635_15640 PF00593 TonB dependent receptor I635_15640 PF07715 TonB-dependent Receptor Plug Domain I635_15665 PF00989 PAS fold I635_15665 PF00072 Response regulator receiver domain I635_15665 PF01627 Hpt domain I635_15665 PF18415 Histidine kinase receptor ArcB trans-membrane domain I635_15665 PF00512 His Kinase A (phospho-acceptor) domain I635_15665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_15670 PF01510 N-acetylmuramoyl-L-alanine amidase I635_15675 PF01493 GXGXG motif I635_15675 PF01645 Conserved region in glutamate synthase I635_15675 PF04898 Glutamate synthase central domain I635_15675 PF00310 Glutamine amidotransferases class-II I635_15680 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster I635_15680 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_15695 PF01048 Phosphorylase superfamily I635_15700 PF03186 CobD/Cbib protein I635_15705 PF01497 Periplasmic binding protein I635_15710 PF00581 Rhodanese-like domain I635_15725 PF01266 FAD dependent oxidoreductase I635_15730 PF00579 tRNA synthetases class I (W and Y) I635_15740 PF01476 LysM domain I635_15740 PF01551 Peptidase family M23 I635_15745 PF03702 Anhydro-N-acetylmuramic acid kinase I635_15750 PF07690 Major Facilitator Superfamily I635_15760 PF00724 NADH:flavin oxidoreductase / NADH oxidase family I635_15770 PF01053 Cys/Met metabolism PLP-dependent enzyme I635_15775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain I635_15775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain I635_15780 PF00043 Glutathione S-transferase, C-terminal domain I635_15780 PF02798 Glutathione S-transferase, N-terminal domain I635_15785 PF01521 Iron-sulphur cluster biosynthesis I635_15795 PF03976 Polyphosphate kinase 2 (PPK2) I635_15800 PF03776 Septum formation topological specificity factor MinE I635_15805 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain I635_15810 PF05209 Septum formation inhibitor MinC, N-terminal domain I635_15810 PF03775 Septum formation inhibitor MinC, C-terminal domain I635_15815 PF10415 Fumarase C C-terminus I635_15815 PF00206 Lyase I635_15820 PF00127 Copper binding proteins, plastocyanin/azurin family I635_15850 PF01566 Natural resistance-associated macrophage protein I635_15855 PF00155 Aminotransferase class I and II I635_15860 PF13188 PAS domain I635_15860 PF08448 PAS fold I635_15860 PF00512 His Kinase A (phospho-acceptor) domain I635_15860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_15860 PF00072 Response regulator receiver domain I635_15875 PF00120 Glutamine synthetase, catalytic domain I635_15875 PF03951 Glutamine synthetase, beta-Grasp domain I635_15885 PF00989 PAS fold I635_15885 PF00512 His Kinase A (phospho-acceptor) domain I635_15885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_15890 PF00072 Response regulator receiver domain I635_15890 PF00158 Sigma-54 interaction domain I635_15890 PF02954 Bacterial regulatory protein, Fis family I635_15895 PF00072 Response regulator receiver domain I635_15900 PF01553 Acyltransferase I635_15905 PF06877 Regulator of ribonuclease activity B I635_15940 PF00512 His Kinase A (phospho-acceptor) domain I635_15940 PF00672 HAMP domain I635_15940 PF01627 Hpt domain I635_15940 PF00072 Response regulator receiver domain I635_15940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) I635_15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_15945 PF10458 Valyl tRNA synthetase tRNA binding arm I635_15945 PF00133 tRNA synthetases class I (I, L, M and V) I635_15945 PF08264 Anticodon-binding domain of tRNA I635_15950 PF04364 DNA polymerase III chi subunit, HolC I635_15955 PF00883 Cytosol aminopeptidase family, catalytic domain I635_15955 PF02789 Cytosol aminopeptidase family, N-terminal domain I635_15960 PF03739 Lipopolysaccharide export system permease LptF/LptG I635_15965 PF03739 Lipopolysaccharide export system permease LptF/LptG I635_15980 PF04545 Sigma-70, region 4 I635_15980 PF04542 Sigma-70 region 2 I635_16020 PF01751 Toprim domain I635_16020 PF01131 DNA topoisomerase I635_16020 PF01396 Topoisomerase DNA binding C4 zinc finger I635_16050 PF00589 Phage integrase family I635_16050 PF02899 Phage integrase, N-terminal SAM-like domain I635_16065 PF06114 IrrE N-terminal-like domain I635_16170 PF07729 FCD domain I635_16170 PF00392 Bacterial regulatory proteins, gntR family I635_16180 PF16355 Domain of unknown function (DUF4982) I635_16180 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 I635_16180 PF00703 Glycosyl hydrolases family 2 I635_16180 PF02836 Glycosyl hydrolases family 2, TIM barrel domain I635_16180 PF02837 Glycosyl hydrolases family 2, sugar binding domain I635_16190 PF13378 Enolase C-terminal domain-like I635_16190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain I635_16195 PF07488 Glycosyl hydrolase family 67 middle domain I635_16195 PF03648 Glycosyl hydrolase family 67 N-terminus I635_16195 PF07477 Glycosyl hydrolase family 67 C-terminus I635_16200 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain I635_16200 PF04616 Glycosyl hydrolases family 43 I635_16210 PF13185 GAF domain I635_16210 PF00990 Diguanylate cyclase, GGDEF domain I635_16235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold I635_16235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain I635_16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_16240 PF01627 Hpt domain I635_16240 PF00072 Response regulator receiver domain I635_16240 PF00512 His Kinase A (phospho-acceptor) domain I635_16240 PF00497 Bacterial extracellular solute-binding proteins, family 3 I635_16245 PF01594 AI-2E family transporter I635_16260 PF00005 ABC transporter I635_16265 PF01032 FecCD transport family I635_16270 PF01497 Periplasmic binding protein I635_16280 PF00593 TonB dependent receptor I635_16280 PF07715 TonB-dependent Receptor Plug Domain I635_16290 PF00230 Major intrinsic protein I635_16295 PF00892 EamA-like transporter family I635_16310 PF00593 TonB dependent receptor I635_16310 PF07715 TonB-dependent Receptor Plug Domain I635_16320 PF02659 Putative manganese efflux pump I635_16330 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain I635_16330 PF00753 Metallo-beta-lactamase superfamily I635_16330 PF10996 Beta-Casp domain I635_16335 PF02696 Uncharacterized ACR, YdiU/UPF0061 family I635_16340 PF01321 Creatinase/Prolidase N-terminal domain I635_16340 PF00557 Metallopeptidase family M24 I635_16345 PF05221 S-adenosyl-L-homocysteine hydrolase I635_16345 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain I635_16360 PF03547 Membrane transport protein I635_16365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III I635_16365 PF13360 PQQ-like domain I635_16390 PF00005 ABC transporter I635_16400 PF00883 Cytosol aminopeptidase family, catalytic domain I635_16400 PF02789 Cytosol aminopeptidase family, N-terminal domain I635_16405 PF12706 Beta-lactamase superfamily domain I635_16410 PF03070 TENA/THI-4/PQQC family I635_16415 PF05402 Coenzyme PQQ synthesis protein D (PqqD) I635_16420 PF13186 Iron-sulfur cluster-binding domain I635_16420 PF04055 Radical SAM superfamily I635_16445 PF00072 Response regulator receiver domain I635_16445 PF00196 Bacterial regulatory proteins, luxR family I635_16450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_16450 PF00512 His Kinase A (phospho-acceptor) domain I635_16460 PF12801 4Fe-4S binding domain I635_16460 PF04205 FMN-binding domain I635_16465 PF00171 Aldehyde dehydrogenase family I635_16470 PF00072 Response regulator receiver domain I635_16470 PF00196 Bacterial regulatory proteins, luxR family I635_16475 PF07730 Histidine kinase I635_16475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_16475 PF05231 MASE1 I635_16480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_16480 PF03466 LysR substrate binding domain I635_16485 PF00171 Aldehyde dehydrogenase family I635_16490 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase I635_16490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase I635_16495 PF02028 BCCT, betaine/carnitine/choline family transporter I635_16510 PF07715 TonB-dependent Receptor Plug Domain I635_16510 PF00593 TonB dependent receptor I635_16515 PF00149 Calcineurin-like phosphoesterase I635_16515 PF16656 Purple acid Phosphatase, N-terminal domain I635_16520 PF03466 LysR substrate binding domain I635_16520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_16525 PF01070 FMN-dependent dehydrogenase I635_16530 PF09330 D-lactate dehydrogenase, membrane binding I635_16530 PF01565 FAD binding domain I635_16535 PF00196 Bacterial regulatory proteins, luxR family I635_16540 PF03783 Curli production assembly/transport component CsgG I635_16565 PF00082 Subtilase family I635_16570 PF00072 Response regulator receiver domain I635_16570 PF00196 Bacterial regulatory proteins, luxR family I635_16585 PF00270 DEAD/DEAH box helicase I635_16585 PF00271 Helicase conserved C-terminal domain I635_16595 PF13340 Putative transposase of IS4/5 family (DUF4096) I635_16600 PF02322 Cytochrome bd terminal oxidase subunit II I635_16605 PF01654 Cytochrome bd terminal oxidase subunit I I635_16620 PF00871 Acetokinase family I635_16630 PF00067 Cytochrome P450 I635_16640 PF00462 Glutaredoxin I635_16650 PF00990 Diguanylate cyclase, GGDEF domain I635_16700 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system I635_16715 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_16715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I635_16730 PF00115 Cytochrome C and Quinol oxidase polypeptide I I635_16755 PF01654 Cytochrome bd terminal oxidase subunit I I635_16760 PF02322 Cytochrome bd terminal oxidase subunit II I635_16765 PF13340 Putative transposase of IS4/5 family (DUF4096) I635_16790 PF00392 Bacterial regulatory proteins, gntR family I635_16790 PF07729 FCD domain I635_16795 PF12794 Mechanosensitive ion channel inner membrane domain 1 I635_16795 PF12795 Mechanosensitive ion channel porin domain I635_16795 PF00924 Mechanosensitive ion channel I635_16810 PF00141 Peroxidase I635_16830 PF03466 LysR substrate binding domain I635_16830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_16840 PF01925 Sulfite exporter TauE/SafE I635_16850 PF08769 Sporulation initiation factor Spo0A C terminal I635_16850 PF00072 Response regulator receiver domain I635_16860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_16860 PF00512 His Kinase A (phospho-acceptor) domain I635_16870 PF03104 DNA polymerase family B, exonuclease domain I635_16870 PF00136 DNA polymerase family B I635_16880 PF13193 AMP-binding enzyme C-terminal domain I635_16880 PF00501 AMP-binding enzyme I635_16895 PF05958 tRNA (Uracil-5-)-methyltransferase I635_16900 PF00440 Bacterial regulatory proteins, tetR family I635_16910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I635_16910 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_16920 PF03167 Uracil DNA glycosylase superfamily I635_16925 PF03707 Bacterial signalling protein N terminal repeat I635_16925 PF00990 Diguanylate cyclase, GGDEF domain I635_16925 PF00563 EAL domain I635_16935 PF01507 Phosphoadenosine phosphosulfate reductase family I635_16940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain I635_16940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain I635_16945 PF00175 Oxidoreductase NAD-binding domain I635_16945 PF00258 Flavodoxin I635_16945 PF00667 FAD binding domain I635_16965 PF04024 PspC domain I635_16970 PF04012 PspA/IM30 family I635_16980 PF01207 Dihydrouridine synthase (Dus) I635_17000 PF01389 OmpA-like transmembrane domain I635_17000 PF00691 OmpA family I635_17005 PF02190 ATP-dependent protease La (LON) substrate-binding domain I635_17005 PF05362 Lon protease (S16) C-terminal proteolytic domain I635_17005 PF00004 ATPase family associated with various cellular activities (AAA) I635_17010 PF00563 EAL domain I635_17010 PF03707 Bacterial signalling protein N terminal repeat I635_17010 PF00990 Diguanylate cyclase, GGDEF domain I635_17015 PF00756 Putative esterase I635_17020 PF01553 Acyltransferase I635_17025 PF01553 Acyltransferase I635_17030 PF00924 Mechanosensitive ion channel I635_17045 PF01370 NAD dependent epimerase/dehydratase family I635_17050 PF00209 Sodium:neurotransmitter symporter family I635_17055 PF00106 short chain dehydrogenase I635_17065 PF01625 Peptide methionine sulfoxide reductase I635_17080 PF00258 Flavodoxin I635_17090 PF02472 Biopolymer transport protein ExbD/TolR I635_17105 PF13181 Tetratricopeptide repeat I635_17105 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) I635_17110 PF01270 Glycosyl hydrolases family 8 I635_17120 PF03552 Cellulose synthase I635_17120 PF00535 Glycosyl transferase family 2 I635_17120 PF07238 PilZ domain I635_17135 PF05175 Methyltransferase small domain I635_17140 PF13460 NAD(P)H-binding I635_17145 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region I635_17145 PF00326 Prolyl oligopeptidase family I635_17150 PF08000 Bacterial PH domain I635_17155 PF00563 EAL domain I635_17155 PF00990 Diguanylate cyclase, GGDEF domain I635_17155 PF08448 PAS fold I635_17165 PF00291 Pyridoxal-phosphate dependent enzyme I635_17170 PF07969 Amidohydrolase family I635_17180 PF00753 Metallo-beta-lactamase superfamily I635_17190 PF03466 LysR substrate binding domain I635_17190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_17195 PF13230 Glutamine amidotransferases class-II I635_17200 PF05360 yiaA/B two helix domain I635_17220 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin I635_17225 PF07715 TonB-dependent Receptor Plug Domain I635_17225 PF00593 TonB dependent receptor I635_17230 PF00171 Aldehyde dehydrogenase family I635_17235 PF01613 Flavin reductase like domain I635_17240 PF00881 Nitroreductase family I635_17245 PF00561 alpha/beta hydrolase fold I635_17250 PF01042 Endoribonuclease L-PSP I635_17255 PF00857 Isochorismatase family I635_17260 PF00296 Luciferase-like monooxygenase I635_17265 PF08362 YcdC-like protein, C-terminal region I635_17265 PF00440 Bacterial regulatory proteins, tetR family I635_17280 PF09905 DNA-binding protein VF530 I635_17285 PF00753 Metallo-beta-lactamase superfamily I635_17285 PF16123 Hydroxyacylglutathione hydrolase C-terminus I635_17295 PF11799 impB/mucB/samB family C-terminal domain I635_17295 PF11798 IMS family HHH motif I635_17295 PF00817 impB/mucB/samB family I635_17305 PF02424 ApbE family I635_17310 PF00175 Oxidoreductase NAD-binding domain I635_17310 PF00111 2Fe-2S iron-sulfur cluster binding domain I635_17310 PF00970 Oxidoreductase FAD-binding domain I635_17315 PF02508 Rnf-Nqr subunit, membrane protein I635_17320 PF02508 Rnf-Nqr subunit, membrane protein I635_17325 PF04205 FMN-binding domain I635_17330 PF03116 NQR2, RnfD, RnfE family I635_17335 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) I635_17335 PF11973 NQRA C-terminal domain I635_17340 PF12241 Trans-2-enoyl-CoA reductase catalytic region I635_17340 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase I635_17340 PF07055 Enoyl reductase FAD binding domain I635_17345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase I635_17345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase I635_17350 PF00311 Phosphoenolpyruvate carboxylase I635_17355 PF00141 Peroxidase I635_17360 PF00141 Peroxidase I635_17370 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain I635_17370 PF00056 lactate/malate dehydrogenase, NAD binding domain I635_17375 PF01316 Arginine repressor, DNA binding domain I635_17375 PF02863 Arginine repressor, C-terminal domain I635_17400 PF00485 Phosphoribulokinase / Uridine kinase family I635_17405 PF07670 Nucleoside recognition I635_17405 PF07662 Na+ dependent nucleoside transporter C-terminus I635_17405 PF01773 Na+ dependent nucleoside transporter N-terminus I635_17425 PF00990 Diguanylate cyclase, GGDEF domain I635_17425 PF00072 Response regulator receiver domain I635_17430 PF02811 PHP domain I635_17430 PF14579 Helix-hairpin-helix motif I635_17430 PF17657 Bacterial DNA polymerase III alpha subunit finger domain I635_17430 PF07733 Bacterial DNA polymerase III alpha NTPase domain I635_17430 PF00929 Exonuclease I635_17435 PF00571 CBS domain I635_17435 PF00005 ABC transporter I635_17440 PF00474 Sodium:solute symporter family I635_17450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_17450 PF00512 His Kinase A (phospho-acceptor) domain I635_17450 PF07689 KaiB domain I635_17460 PF08443 RimK-like ATP-grasp domain I635_17460 PF18030 RimK PreATP-grasp domain I635_17470 PF18030 RimK PreATP-grasp domain I635_17470 PF08443 RimK-like ATP-grasp domain I635_17480 PF00196 Bacterial regulatory proteins, luxR family I635_17480 PF00072 Response regulator receiver domain I635_17495 PF02690 Na+/Pi-cotransporter I635_17500 PF00248 Aldo/keto reductase family I635_17515 PF00563 EAL domain I635_17515 PF08447 PAS fold I635_17515 PF08448 PAS fold I635_17515 PF00990 Diguanylate cyclase, GGDEF domain I635_17525 PF03143 Elongation factor Tu C-terminal domain I635_17525 PF03144 Elongation factor Tu domain 2 I635_17525 PF00009 Elongation factor Tu GTP binding domain I635_17530 PF03309 Type III pantothenate kinase I635_17535 PF02237 Biotin protein ligase C terminal domain I635_17535 PF08279 HTH domain I635_17535 PF03099 Biotin/lipoate A/B protein ligase family I635_17540 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain I635_17540 PF01565 FAD binding domain I635_17545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_17545 PF12729 Four helix bundle sensory module for signal transduction I635_17545 PF00672 HAMP domain I635_17570 PF03412 Peptidase C39 family I635_17570 PF00005 ABC transporter I635_17570 PF00664 ABC transporter transmembrane region I635_17575 PF03466 LysR substrate binding domain I635_17575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_17590 PF01050 Mannose-6-phosphate isomerase I635_17590 PF00483 Nucleotidyl transferase I635_17595 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain I635_17595 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain I635_17595 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain I635_17600 PF00535 Glycosyl transferase family 2 I635_17605 PF16363 GDP-mannose 4,6 dehydratase I635_17610 PF04321 RmlD substrate binding domain I635_17615 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase I635_17620 PF00483 Nucleotidyl transferase I635_17640 PF13181 Tetratricopeptide repeat I635_17680 PF00535 Glycosyl transferase family 2 I635_17770 PF13817 IS66 C-terminal element I635_17770 PF03050 Transposase IS66 family I635_17770 PF13005 zinc-finger binding domain of transposase IS66 I635_17770 PF13007 Transposase C of IS166 homeodomain I635_17790 PF03050 Transposase IS66 family I635_17790 PF13007 Transposase C of IS166 homeodomain I635_17790 PF13005 zinc-finger binding domain of transposase IS66 I635_17790 PF13817 IS66 C-terminal element I635_17830 PF00700 Bacterial flagellin C-terminal helical region I635_17830 PF00669 Bacterial flagellin N-terminal helical region I635_17840 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system I635_17845 PF01196 Ribosomal protein L17 I635_17850 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain I635_17850 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain I635_17850 PF01000 RNA polymerase Rpb3/RpoA insert domain I635_17855 PF00163 Ribosomal protein S4/S9 N-terminal domain I635_17855 PF01479 S4 domain I635_17860 PF00411 Ribosomal protein S11 I635_17865 PF00416 Ribosomal protein S13/S18 I635_17870 PF00444 Ribosomal protein L36 I635_17875 PF00344 SecY translocase I635_17880 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A I635_17885 PF00327 Ribosomal protein L30p/L7e I635_17890 PF00333 Ribosomal protein S5, N-terminal domain I635_17890 PF03719 Ribosomal protein S5, C-terminal domain I635_17895 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast I635_17900 PF00347 Ribosomal protein L6 I635_17905 PF00410 Ribosomal protein S8 I635_17910 PF00253 Ribosomal protein S14p/S29e I635_17915 PF00281 Ribosomal protein L5 I635_17915 PF00673 ribosomal L5P family C-terminus I635_17920 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 I635_17920 PF00467 KOW motif I635_17925 PF00238 Ribosomal protein L14p/L23e I635_17930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_17930 PF00512 His Kinase A (phospho-acceptor) domain I635_17930 PF09308 LuxQ, periplasmic I635_17930 PF00072 Response regulator receiver domain I635_17950 PF08032 RNA 2'-O ribose methyltransferase substrate binding I635_17950 PF00588 SpoU rRNA Methylase family I635_17955 PF08206 Ribonuclease B OB domain I635_17955 PF00575 S1 RNA binding domain I635_17955 PF00773 RNB domain I635_17955 PF08461 Ribonuclease R winged-helix domain I635_17955 PF17876 Cold shock domain I635_17970 PF16655 PhoD-like phosphatase, N-terminal domain I635_17970 PF09423 PhoD-like phosphatase I635_17985 PF07715 TonB-dependent Receptor Plug Domain I635_17985 PF00593 TonB dependent receptor I635_18000 PF08238 Sel1 repeat I635_18010 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase I635_18015 PF00175 Oxidoreductase NAD-binding domain I635_18015 PF00970 Oxidoreductase FAD-binding domain I635_18030 PF04389 Peptidase family M28 I635_18040 PF01590 GAF domain I635_18040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_18040 PF00512 His Kinase A (phospho-acceptor) domain I635_18040 PF08446 PAS fold I635_18040 PF00360 Phytochrome region I635_18050 PF01654 Cytochrome bd terminal oxidase subunit I I635_18055 PF02322 Cytochrome bd terminal oxidase subunit II I635_18065 PF01037 Lrp/AsnC ligand binding domain I635_18065 PF13404 AsnC-type helix-turn-helix domain I635_18075 PF00313 'Cold-shock' DNA-binding domain I635_18080 PF03109 ABC1 family I635_18090 PF01209 ubiE/COQ5 methyltransferase family I635_18100 PF01432 Peptidase family M3 I635_18105 PF00072 Response regulator receiver domain I635_18115 PF00989 PAS fold I635_18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_18115 PF00512 His Kinase A (phospho-acceptor) domain I635_18120 PF00158 Sigma-54 interaction domain I635_18120 PF02954 Bacterial regulatory protein, Fis family I635_18120 PF00072 Response regulator receiver domain I635_18125 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_18125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain I635_18130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain I635_18130 PF10518 TAT (twin-arginine translocation) pathway signal sequence I635_18130 PF01568 Molydopterin dinucleotide binding domain I635_18130 PF00384 Molybdopterin oxidoreductase I635_18135 PF00326 Prolyl oligopeptidase family I635_18135 PF07676 WD40-like Beta Propeller Repeat I635_18190 PF00005 ABC transporter I635_18190 PF00664 ABC transporter transmembrane region I635_18190 PF03412 Peptidase C39 family I635_18195 PF00072 Response regulator receiver domain I635_18195 PF00196 Bacterial regulatory proteins, luxR family I635_18205 PF18030 RimK PreATP-grasp domain I635_18205 PF08443 RimK-like ATP-grasp domain I635_18215 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system I635_18220 PF00004 ATPase family associated with various cellular activities (AAA) I635_18220 PF07724 AAA domain (Cdc48 subfamily) I635_18225 PF00227 Proteasome subunit I635_18230 PF05036 Sporulation related domain I635_18235 PF00271 Helicase conserved C-terminal domain I635_18235 PF17764 3′ DNA-binding domain (3′BD) I635_18235 PF00270 DEAD/DEAH box helicase I635_18235 PF18074 Primosomal protein N C-terminal domain I635_18235 PF18319 PriA DNA helicase Cys-rich region (CRR) domain I635_18240 PF01197 Ribosomal protein L31 I635_18250 PF03949 Malic enzyme, NAD binding domain I635_18250 PF00390 Malic enzyme, N-terminal domain I635_18255 PF01340 Met Apo-repressor, MetJ I635_18260 PF02219 Methylenetetrahydrofolate reductase I635_18265 PF03631 Virulence factor BrkB I635_18280 PF00561 alpha/beta hydrolase fold I635_18285 PF02580 D-Tyr-tRNA(Tyr) deacylase I635_18290 PF09500 Putative thioesterase (yiiD_Cterm) I635_18290 PF00583 Acetyltransferase (GNAT) family I635_18295 PF04542 Sigma-70 region 2 I635_18295 PF04545 Sigma-70, region 4 I635_18295 PF00140 Sigma-70 factor, region 1.2 I635_18300 PF00563 EAL domain I635_18300 PF08668 HDOD domain I635_18305 PF00563 EAL domain I635_18305 PF08668 HDOD domain I635_18310 PF18075 FtsX extracellular domain I635_18315 PF00005 ABC transporter I635_18320 PF02881 SRP54-type protein, helical bundle domain I635_18320 PF00448 SRP54-type protein, GTPase domain I635_18340 PF01914 MarC family integral membrane protein I635_18350 PF00883 Cytosol aminopeptidase family, catalytic domain I635_18350 PF12404 Peptidase I635_18355 PF17746 SfsA N-terminal OB domain I635_18355 PF03749 Sugar fermentation stimulation protein RE domain I635_18360 PF01258 Prokaryotic dksA/traR C4-type zinc finger I635_18365 PF00749 tRNA synthetases class I (E and Q), catalytic domain I635_18370 PF12626 Polymerase A arginine-rich C-terminus I635_18370 PF01743 Poly A polymerase head domain I635_18370 PF12627 Probable RNA and SrmB- binding site of polymerase A I635_18375 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) I635_18380 PF02548 Ketopantoate hydroxymethyltransferase I635_18385 PF02569 Pantoate-beta-alanine ligase I635_18390 PF00282 Pyridoxal-dependent decarboxylase conserved domain I635_18410 PF01061 ABC-2 type transporter I635_18415 PF00005 ABC transporter I635_18420 PF00072 Response regulator receiver domain I635_18420 PF00486 Transcriptional regulatory protein, C terminal I635_18425 PF00512 His Kinase A (phospho-acceptor) domain I635_18425 PF00672 HAMP domain I635_18425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_18430 PF07715 TonB-dependent Receptor Plug Domain I635_18430 PF00593 TonB dependent receptor I635_18435 PF13640 2OG-Fe(II) oxygenase superfamily I635_18435 PF18331 PKHD-type hydroxylase C-terminal domain I635_18450 PF00571 CBS domain I635_18450 PF01595 Cyclin M transmembrane N-terminal domain I635_18495 PF03144 Elongation factor Tu domain 2 I635_18495 PF03143 Elongation factor Tu C-terminal domain I635_18495 PF00009 Elongation factor Tu GTP binding domain I635_18500 PF03143 Elongation factor Tu C-terminal domain I635_18500 PF00009 Elongation factor Tu GTP binding domain I635_18500 PF03144 Elongation factor Tu domain 2 I635_18505 PF00679 Elongation factor G C-terminus I635_18505 PF03764 Elongation factor G, domain IV I635_18505 PF14492 Elongation Factor G, domain II I635_18505 PF00009 Elongation factor Tu GTP binding domain I635_18505 PF03144 Elongation factor Tu domain 2 I635_18510 PF00177 Ribosomal protein S7p/S5e I635_18515 PF00164 Ribosomal protein S12/S23 I635_18520 PF04997 RNA polymerase Rpb1, domain 1 I635_18520 PF04998 RNA polymerase Rpb1, domain 5 I635_18520 PF05000 RNA polymerase Rpb1, domain 4 I635_18520 PF04983 RNA polymerase Rpb1, domain 3 I635_18520 PF00623 RNA polymerase Rpb1, domain 2 I635_18525 PF04560 RNA polymerase Rpb2, domain 7 I635_18525 PF10385 RNA polymerase beta subunit external 1 domain I635_18525 PF00562 RNA polymerase Rpb2, domain 6 I635_18525 PF04563 RNA polymerase beta subunit I635_18525 PF04565 RNA polymerase Rpb2, domain 3 I635_18525 PF04561 RNA polymerase Rpb2, domain 2 I635_18535 PF00466 Ribosomal protein L10 I635_18540 PF00687 Ribosomal protein L1p/L10e family I635_18545 PF00298 Ribosomal protein L11, RNA binding domain I635_18545 PF03946 Ribosomal protein L11, N-terminal domain I635_18565 PF02357 Transcription termination factor nusG I635_18565 PF00467 KOW motif I635_18570 PF00584 SecE/Sec61-gamma subunits of protein translocation complex I635_18575 PF00664 ABC transporter transmembrane region I635_18575 PF00005 ABC transporter I635_18580 PF03737 Aldolase/RraA I635_18585 PF05649 Peptidase family M13 I635_18585 PF01431 Peptidase family M13 I635_18595 PF03880 DbpA RNA binding domain I635_18595 PF00270 DEAD/DEAH box helicase I635_18595 PF00271 Helicase conserved C-terminal domain I635_18600 PF01979 Amidohydrolase family I635_18605 PF08212 Lipocalin-like domain I635_18610 PF00248 Aldo/keto reductase family I635_18615 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily I635_18620 PF00924 Mechanosensitive ion channel I635_18620 PF05552 Conserved TM helix I635_18625 PF07690 Major Facilitator Superfamily I635_18630 PF00128 Alpha amylase, catalytic domain I635_18640 PF01227 GTP cyclohydrolase I I635_18650 PF04371 Porphyromonas-type peptidyl-arginine deiminase I635_18655 PF00795 Carbon-nitrogen hydrolase I635_18670 PF08494 DEAD/H associated I635_18670 PF00271 Helicase conserved C-terminal domain I635_18670 PF00270 DEAD/DEAH box helicase I635_18680 PF01068 ATP dependent DNA ligase domain I635_18680 PF04679 ATP dependent DNA ligase C terminal region I635_18680 PF04675 DNA ligase N terminus I635_18685 PF01132 Elongation factor P (EF-P) OB domain I635_18685 PF08207 Elongation factor P (EF-P) KOW-like domain I635_18685 PF09285 Elongation factor P, C-terminal I635_18690 PF00294 pfkB family carbohydrate kinase I635_18700 PF02574 Homocysteine S-methyltransferase I635_18700 PF02310 B12 binding domain I635_18700 PF02607 B12 binding domain I635_18700 PF02965 Vitamin B12 dependent methionine synthase, activation domain I635_18700 PF00809 Pterin binding enzyme I635_18705 PF00043 Glutathione S-transferase, C-terminal domain I635_18705 PF02798 Glutathione S-transferase, N-terminal domain I635_18710 PF02798 Glutathione S-transferase, N-terminal domain I635_18720 PF00561 alpha/beta hydrolase fold I635_18735 PF00171 Aldehyde dehydrogenase family I635_18740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain I635_18740 PF00205 Thiamine pyrophosphate enzyme, central domain I635_18740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain I635_18750 PF00762 Ferrochelatase I635_18755 PF03806 AbgT putative transporter family I635_18760 PF01145 SPFH domain / Band 7 family I635_18765 PF12221 Bacterial membrane protein N terminal I635_18765 PF01145 SPFH domain / Band 7 family I635_18770 PF16360 GTP-binding GTPase Middle Region I635_18770 PF01926 50S ribosome-binding GTPase I635_18770 PF13167 GTP-binding GTPase N-terminal I635_18775 PF17209 Hfq protein I635_18785 PF01119 DNA mismatch repair protein, C-terminal domain I635_18785 PF08676 MutL C terminal dimerisation domain I635_18790 PF01520 N-acetylmuramoyl-L-alanine amidase I635_18795 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE I635_18800 PF01256 Carbohydrate kinase I635_18800 PF03853 YjeF-related protein N-terminus I635_18805 PF08331 Domain of unknown function (DUF1730) I635_18815 PF01208 Uroporphyrinogen decarboxylase (URO-D) I635_18820 PF09297 NADH pyrophosphatase zinc ribbon domain I635_18820 PF00293 NUDIX domain I635_18825 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ I635_18830 PF01475 Ferric uptake regulator family I635_18840 PF01894 Uncharacterised protein family UPF0047 I635_18845 PF00691 OmpA family I635_18845 PF05736 OprF membrane domain I635_18850 PF03796 DnaB-like helicase C terminal domain I635_18850 PF00772 DnaB-like helicase N terminal domain I635_18875 PF03473 MOSC domain I635_18875 PF03475 3-alpha domain I635_18890 PF01281 Ribosomal protein L9, N-terminal domain I635_18890 PF03948 Ribosomal protein L9, C-terminal domain I635_18895 PF01084 Ribosomal protein S18 I635_18900 PF01250 Ribosomal protein S6 I635_18905 PF00512 His Kinase A (phospho-acceptor) domain I635_18905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_18905 PF07689 KaiB domain I635_18915 PF12704 MacB-like periplasmic core domain I635_18915 PF02687 FtsX-like permease family I635_18915 PF00005 ABC transporter I635_18925 PF08447 PAS fold I635_18925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_18930 PF00512 His Kinase A (phospho-acceptor) domain I635_18930 PF00989 PAS fold I635_18930 PF13188 PAS domain I635_18930 PF13426 PAS domain I635_18930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_18935 PF13426 PAS domain I635_18935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain I635_18935 PF08447 PAS fold I635_18945 PF01545 Cation efflux family I635_18945 PF16916 Dimerisation domain of Zinc Transporter I635_18970 PF00933 Glycosyl hydrolase family 3 N terminal domain I635_18970 PF14310 Fibronectin type III-like domain I635_18970 PF01915 Glycosyl hydrolase family 3 C-terminal domain I635_18975 PF07690 Major Facilitator Superfamily I635_18980 PF00232 Glycosyl hydrolase family 1 I635_18985 PF00356 Bacterial regulatory proteins, lacI family I635_18990 PF00083 Sugar (and other) transporter I635_18995 PF13474 SnoaL-like domain I635_19005 PF17151 Periplasmic sensor domain I635_19005 PF00990 Diguanylate cyclase, GGDEF domain I635_19015 PF08021 Siderophore-interacting FAD-binding domain I635_19015 PF04954 Siderophore-interacting protein I635_19020 PF05532 CsbD-like I635_19045 PF00472 RF-1 domain I635_19050 PF00561 alpha/beta hydrolase fold I635_19050 PF00364 Biotin-requiring enzyme I635_19070 PF01292 Prokaryotic cytochrome b561 I635_19075 PF04264 YceI-like domain I635_19080 PF07992 Pyridine nucleotide-disulphide oxidoreductase I635_19085 PF00593 TonB dependent receptor I635_19085 PF07715 TonB-dependent Receptor Plug Domain I635_19095 PF03466 LysR substrate binding domain I635_19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_19100 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) I635_19105 PF16884 N-terminal domain of oxidoreductase I635_19105 PF00107 Zinc-binding dehydrogenase I635_19110 PF00563 EAL domain I635_19110 PF00360 Phytochrome region I635_19110 PF01590 GAF domain I635_19110 PF00990 Diguanylate cyclase, GGDEF domain I635_19115 PF09308 LuxQ, periplasmic I635_19115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_19115 PF00072 Response regulator receiver domain I635_19115 PF00512 His Kinase A (phospho-acceptor) domain I635_19125 PF00296 Luciferase-like monooxygenase I635_19130 PF01380 SIS domain I635_19135 PF00455 DeoR C terminal sensor domain I635_19135 PF08220 DeoR-like helix-turn-helix domain I635_19140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain I635_19140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold I635_19145 PF12804 MobA-like NTP transferase domain I635_19145 PF14602 Hexapeptide repeat of succinyl-transferase I635_19145 PF00132 Bacterial transferase hexapeptide (six repeats) I635_19155 PF00892 EamA-like transporter family I635_19160 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain I635_19160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain I635_19165 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain I635_19165 PF00730 HhH-GPD superfamily base excision DNA repair protein I635_19170 PF00144 Beta-lactamase I635_19175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain I635_19175 PF17810 Arginine decarboxylase helical bundle domain I635_19175 PF17944 Arginine decarboxylase C-terminal helical extension I635_19185 PF02233 NAD(P) transhydrogenase beta subunit I635_19190 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch I635_19195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain I635_19195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain I635_19235 PF07715 TonB-dependent Receptor Plug Domain I635_19235 PF00593 TonB dependent receptor I635_19270 PF01040 UbiA prenyltransferase family I635_19275 PF03626 Prokaryotic Cytochrome C oxidase subunit IV I635_19280 PF00510 Cytochrome c oxidase subunit III I635_19285 PF00115 Cytochrome C and Quinol oxidase polypeptide I I635_19290 PF06481 COX Aromatic Rich Motif I635_19290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain I635_19300 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin I635_19305 PF01850 PIN domain I635_19325 PF00118 TCP-1/cpn60 chaperonin family I635_19330 PF00166 Chaperonin 10 Kd subunit I635_19335 PF04186 FxsA cytoplasmic membrane protein I635_19340 PF03091 CutA1 divalent ion tolerance protein I635_19345 PF11412 Disulphide bond corrector protein DsbC I635_19345 PF02683 Cytochrome C biogenesis protein transmembrane region I635_19350 PF01551 Peptidase family M23 I635_19355 PF01220 Dehydroquinase class II I635_19360 PF00364 Biotin-requiring enzyme I635_19365 PF02785 Biotin carboxylase C-terminal domain I635_19365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain I635_19365 PF00289 Biotin carboxylase, N-terminal domain I635_19390 PF02811 PHP domain I635_19390 PF00929 Exonuclease I635_19390 PF11490 DNA polymerase III polC-type N-terminus II I635_19390 PF07733 Bacterial DNA polymerase III alpha NTPase domain I635_19390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain I635_19390 PF14579 Helix-hairpin-helix motif I635_19410 PF01355 High potential iron-sulfur protein I635_19415 PF01425 Amidase I635_19430 PF01207 Dihydrouridine synthase (Dus) I635_19435 PF02954 Bacterial regulatory protein, Fis family I635_19440 PF01808 AICARFT/IMPCHase bienzyme I635_19440 PF02142 MGS-like domain I635_19450 PF02844 Phosphoribosylglycinamide synthetase, N domain I635_19450 PF02843 Phosphoribosylglycinamide synthetase, C domain I635_19450 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain I635_19465 PF00520 Ion transport protein I635_19465 PF00027 Cyclic nucleotide-binding domain I635_19470 PF00485 Phosphoribulokinase / Uridine kinase family I635_19480 PF00072 Response regulator receiver domain I635_19480 PF00486 Transcriptional regulatory protein, C terminal I635_19490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase I635_19490 PF00512 His Kinase A (phospho-acceptor) domain I635_19490 PF00672 HAMP domain I635_19500 PF01055 Glycosyl hydrolases family 31 I635_19500 PF13802 Galactose mutarotase-like I635_19500 PF17137 Domain of unknown function (DUF5110) I635_19500 PF16338 Domain of unknown function (DUF4968) I635_19515 PF01430 Hsp33 protein I635_19520 PF01479 S4 domain I635_19525 PF11356 Type II secretion system protein C I635_19530 PF03958 Bacterial type II/III secretion system short domain I635_19530 PF00263 Bacterial type II and III secretion system protein I635_19535 PF00437 Type II/IV secretion system protein I635_19540 PF00482 Type II secretion system (T2SS), protein F I635_19545 PF08334 Type II secretion system (T2SS), protein G I635_19545 PF07963 Prokaryotic N-terminal methylation motif I635_19550 PF12019 Type II transport protein GspH I635_19555 PF02501 Type II secretion system (T2SS), protein I I635_19555 PF07963 Prokaryotic N-terminal methylation motif I635_19560 PF07963 Prokaryotic N-terminal methylation motif I635_19560 PF11612 Type II secretion system (T2SS), protein J I635_19570 PF05134 Type II secretion system (T2SS), protein L I635_19570 PF12693 GspL periplasmic domain I635_19575 PF04612 Type II secretion system (T2SS), protein M I635_19590 PF00171 Aldehyde dehydrogenase family I635_19595 PF01931 Protein of unknown function DUF84 I635_19600 PF13419 Haloacid dehalogenase-like hydrolase I635_19605 PF00293 NUDIX domain I635_19610 PF00459 Inositol monophosphatase family I635_19625 PF04349 Periplasmic glucan biosynthesis protein, MdoG I635_19635 PF06794 Uncharacterised protein family (UPF0270) I635_19640 PF00561 alpha/beta hydrolase fold I635_19650 PF12848 ABC transporter I635_19650 PF00005 ABC transporter I635_19670 PF04102 SlyX I635_19680 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase I635_19680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase I635_19690 PF03449 Transcription elongation factor, N-terminal I635_19690 PF01272 Transcription elongation factor, GreA/GreB, C-term I635_19695 PF09371 Tex-like protein N-terminal domain I635_19695 PF00575 S1 RNA binding domain I635_19695 PF17674 HHH domain I635_19695 PF16921 Tex protein YqgF-like domain I635_19700 PF04820 Tryptophan halogenase I635_19725 PF12833 Helix-turn-helix domain I635_19735 PF04616 Glycosyl hydrolases family 43 I635_19745 PF00331 Glycosyl hydrolase family 10 I635_19745 PF03422 Carbohydrate binding module (family 6) I635_19745 PF00553 Cellulose binding domain I635_19750 PF00248 Aldo/keto reductase family I635_19755 PF00456 Transketolase, thiamine diphosphate binding domain I635_19755 PF02780 Transketolase, C-terminal domain I635_19755 PF02779 Transketolase, pyrimidine binding domain I635_19765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain I635_19765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain I635_19770 PF00923 Transaldolase/Fructose-6-phosphate aldolase I635_19780 PF14310 Fibronectin type III-like domain I635_19780 PF01915 Glycosyl hydrolase family 3 C-terminal domain I635_19780 PF00933 Glycosyl hydrolase family 3 N terminal domain I635_19785 PF00083 Sugar (and other) transporter I635_19800 PF00457 Glycosyl hydrolases family 11 I635_19805 PF06964 Alpha-L-arabinofuranosidase C-terminal domain I635_19830 PF00561 alpha/beta hydrolase fold I635_19835 PF00156 Phosphoribosyl transferase domain I635_19845 PF01521 Iron-sulphur cluster biosynthesis I635_19845 PF01106 NifU-like domain I635_19855 PF01177 Asp/Glu/Hydantoin racemase I635_19865 PF01554 MatE I635_19880 PF02630 SCO1/SenC I635_19885 PF01040 UbiA prenyltransferase family I635_19890 PF02628 Cytochrome oxidase assembly protein I635_19910 PF00510 Cytochrome c oxidase subunit III I635_19915 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 I635_19920 PF00115 Cytochrome C and Quinol oxidase polypeptide I I635_19925 PF02790 Cytochrome C oxidase subunit II, transmembrane domain I635_19925 PF00116 Cytochrome C oxidase subunit II, periplasmic domain I635_19930 PF00717 Peptidase S24-like I635_19930 PF01726 LexA DNA binding domain I635_19935 PF01553 Acyltransferase I635_19940 PF00585 C-terminal regulatory domain of Threonine dehydratase I635_19940 PF00291 Pyridoxal-phosphate dependent enzyme I635_19945 PF00920 Dehydratase family I635_19950 PF03458 UPF0126 domain I635_19955 PF01078 Magnesium chelatase, subunit ChlI I635_19955 PF13335 Magnesium chelatase, subunit ChlI C-terminal I635_19960 PF03466 LysR substrate binding domain I635_19960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family I635_19965 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain I635_19965 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain I635_19970 PF07690 Major Facilitator Superfamily I635_19980 PF17243 POTRA domain TamA domain 1 I635_19980 PF07244 Surface antigen variable number repeat I635_19980 PF01103 Surface antigen I635_19985 PF04357 TamB, inner membrane protein subunit of TAM complex I635_20010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain I635_20010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain I635_20020 PF01472 PUA domain I635_20020 PF00696 Amino acid kinase family I635_20040 PF03109 ABC1 family I635_20065 PF01979 Amidohydrolase family I635_20090 PF01206 Sulfurtransferase TusA I635_20095 PF00156 Phosphoribosyl transferase domain I635_20100 PF03725 3' exoribonuclease family, domain 2 I635_20100 PF01138 3' exoribonuclease family, domain 1 I635_20110 PF08340 Domain of unknown function (DUF1732) I635_20110 PF03755 YicC-like family, N-terminal region I635_20125 PF07804 HipA-like C-terminal domain I635_20125 PF13657 HipA N-terminal domain I635_20130 PF01381 Helix-turn-helix I635_20165 PF02384 N-6 DNA Methylase I635_20165 PF12161 HsdM N-terminal domain I635_20170 PF00271 Helicase conserved C-terminal domain I635_20170 PF08463 EcoEI R protein C-terminal I635_20170 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) I635_20170 PF04851 Type III restriction enzyme, res subunit I635_20195 PF13411 MerR HTH family regulatory protein I635_20200 PF01609 Transposase DDE domain I635_20200 PF13808 DDE_Tnp_1-associated I635_20205 PF00884 Sulfatase I635_20205 PF16385 Domain of unknown function I635_20210 PF07726 ATPase family associated with various cellular activities (AAA) I635_20210 PF17863 AAA lid domain I635_20225 PF13519 von Willebrand factor type A domain I635_20245 PF00732 GMC oxidoreductase I635_20245 PF05199 GMC oxidoreductase I635_20250 PF00171 Aldehyde dehydrogenase family I635_20255 PF00501 AMP-binding enzyme I635_20255 PF13193 AMP-binding enzyme C-terminal domain I635_20260 PF02515 CoA-transferase family III I635_20265 PF00106 short chain dehydrogenase I635_20270 PF02770 Acyl-CoA dehydrogenase, middle domain I635_20270 PF00441 Acyl-CoA dehydrogenase, C-terminal domain I635_20270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain I635_20275 PF00108 Thiolase, N-terminal domain I635_20275 PF02803 Thiolase, C-terminal domain I635_20280 PF00378 Enoyl-CoA hydratase/isomerase I635_20285 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term I635_20285 PF12833 Helix-turn-helix domain I635_20290 PF13333 Integrase core domain I635_20290 PF13276 HTH-like domain I635_20290 PF00665 Integrase core domain I635_20295 PF01527 Transposase I635_20300 PF01081 KDPG and KHG aldolase I635_20305 PF02685 Glucokinase I635_20310 PF00920 Dehydratase family I635_20315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase I635_20320 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain I635_20320 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain I635_20325 PF01418 Helix-turn-helix domain, rpiR family I635_20325 PF01380 SIS domain I635_20330 PF02887 Pyruvate kinase, alpha/beta domain I635_20330 PF00224 Pyruvate kinase, barrel domain I635_20360 PF13784 Fic/DOC family N-terminal I635_20360 PF02661 Fic/DOC family I635_20370 PF00356 Bacterial regulatory proteins, lacI family I635_20380 PF00691 OmpA family I635_20380 PF05736 OprF membrane domain I635_20385 PF01966 HD domain I635_20400 PF02798 Glutathione S-transferase, N-terminal domain I635_20400 PF00043 Glutathione S-transferase, C-terminal domain I635_20410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain I635_20410 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain I635_20415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I635_20415 PF02874 ATP synthase alpha/beta family, beta-barrel domain I635_20420 PF00231 ATP synthase I635_20425 PF02874 ATP synthase alpha/beta family, beta-barrel domain I635_20425 PF00306 ATP synthase alpha/beta chain, C terminal domain I635_20425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain I635_20430 PF00213 ATP synthase delta (OSCP) subunit I635_20435 PF00430 ATP synthase B/B' CF(0) I635_20440 PF00137 ATP synthase subunit C I635_20445 PF00119 ATP synthase A chain I635_20455 PF17762 HTH domain found in ParB protein I635_20455 PF02195 ParB-like nuclease domain I635_20460 PF13614 AAA domain I635_20465 PF02527 rRNA small subunit methyltransferase G I635_20470 PF13932 GidA associated domain I635_20470 PF01134 Glucose inhibited division protein A I635_20475 PF01134 Glucose inhibited division protein A I635_20475 PF13932 GidA associated domain I635_20490 PF00258 Flavodoxin I635_20495 PF01926 50S ribosome-binding GTPase I635_20495 PF12631 MnmE helical domain I635_20495 PF10396 GTP-binding protein TrmE N-terminus I635_20500 PF04461 Protein of unknown function (DUF520) I635_20505 PF02096 60Kd inner membrane protein I635_20505 PF14849 YidC periplasmic domain I635_20510 PF01809 Putative membrane protein insertion efficiency factor I635_20515 PF00825 Ribonuclease P I635_20520 PF00468 Ribosomal protein L34 I635_20914 PF13340 Putative transposase of IS4/5 family (DUF4096) I635_21034 PF00437 Type II/IV secretion system protein I635_21214 PF00589 Phage integrase family I635_21234 PF00005 ABC transporter I635_21234 PF00664 ABC transporter transmembrane region I635_21254 PF13276 HTH-like domain I635_21254 PF00665 Integrase core domain I635_21254 PF13333 Integrase core domain I635_21299 PF13438 Domain of unknown function (DUF4113) I635_21299 PF11799 impB/mucB/samB family C-terminal domain I635_21299 PF00817 impB/mucB/samB family I635_21334 PF00072 Response regulator receiver domain I635_21334 PF01339 CheB methylesterase I635_21364 PF02796 Helix-turn-helix domain of resolvase I635_21364 PF00239 Resolvase, N terminal domain I635_21369 PF13700 Domain of unknown function (DUF4158) I635_21369 PF01526 Tn3 transposase DDE domain I635_21379 PF07693 KAP family P-loop domain I635_21419 PF05593 RHS Repeat I635_21419 PF03527 RHS protein I635_21429 PF05593 RHS Repeat I635_21429 PF03527 RHS protein I635_21539 PF00975 Thioesterase domain I635_21549 PF13193 AMP-binding enzyme C-terminal domain I635_21549 PF07993 Male sterility protein I635_21549 PF00501 AMP-binding enzyme I635_21549 PF00668 Condensation domain I635_21549 PF00550 Phosphopantetheine attachment site I635_21554 PF00668 Condensation domain I635_21554 PF13193 AMP-binding enzyme C-terminal domain I635_21554 PF00501 AMP-binding enzyme I635_21554 PF00550 Phosphopantetheine attachment site I635_21554 PF00975 Thioesterase domain I635_21559 PF16653 Saccharopine dehydrogenase C-terminal domain I635_21559 PF03435 Saccharopine dehydrogenase NADP binding domain I635_21564 PF00664 ABC transporter transmembrane region I635_21564 PF00005 ABC transporter I635_21569 PF01804 Penicillin amidase I635_21584 PF03621 MbtH-like protein I635_21589 PF00550 Phosphopantetheine attachment site I635_21589 PF00501 AMP-binding enzyme I635_21589 PF13193 AMP-binding enzyme C-terminal domain I635_21589 PF00668 Condensation domain I635_21604 PF00501 AMP-binding enzyme I635_21604 PF13193 AMP-binding enzyme C-terminal domain I635_21604 PF00668 Condensation domain I635_21604 PF07993 Male sterility protein I635_21604 PF00550 Phosphopantetheine attachment site I635_21614 PF00501 AMP-binding enzyme I635_21614 PF13193 AMP-binding enzyme C-terminal domain I635_21614 PF00668 Condensation domain I635_21614 PF00550 Phosphopantetheine attachment site I635_21619 PF16197 Ketoacyl-synthetase C-terminal extension I635_21619 PF00698 Acyl transferase domain I635_21619 PF00668 Condensation domain I635_21619 PF00109 Beta-ketoacyl synthase, N-terminal domain I635_21619 PF00550 Phosphopantetheine attachment site I635_21619 PF02801 Beta-ketoacyl synthase, C-terminal domain I635_21624 PF07993 Male sterility protein I635_21624 PF13193 AMP-binding enzyme C-terminal domain I635_21624 PF00501 AMP-binding enzyme I635_21624 PF00550 Phosphopantetheine attachment site I635_21624 PF00668 Condensation domain I635_21629 PF00550 Phosphopantetheine attachment site I635_21629 PF00975 Thioesterase domain I635_21629 PF00668 Condensation domain I635_21629 PF13193 AMP-binding enzyme C-terminal domain I635_21629 PF00501 AMP-binding enzyme I635_21649 PF00668 Condensation domain I635_21649 PF00501 AMP-binding enzyme I635_21649 PF13193 AMP-binding enzyme C-terminal domain I635_21649 PF07993 Male sterility protein I635_21649 PF00550 Phosphopantetheine attachment site I635_21654 PF13193 AMP-binding enzyme C-terminal domain I635_21654 PF00668 Condensation domain I635_21654 PF00501 AMP-binding enzyme I635_21654 PF00550 Phosphopantetheine attachment site I635_21659 PF00501 AMP-binding enzyme I635_21659 PF00975 Thioesterase domain I635_21659 PF00550 Phosphopantetheine attachment site I635_21659 PF13193 AMP-binding enzyme C-terminal domain I635_21659 PF00668 Condensation domain I635_21689 PF13401 AAA domain I635_21689 PF11426 Tn7 transposition regulator TnsC I635_21694 PF00665 Integrase core domain I635_21699 PF08722 TnsA endonuclease N terminal I635_21699 PF08721 TnsA endonuclease C terminal I635_21754 PF13361 UvrD-like helicase C-terminal domain I635_21754 PF00580 UvrD/REP helicase N-terminal domain I635_21794 PF00437 Type II/IV secretion system protein I635_21824 PF00665 Integrase core domain I635_21884 PF13340 Putative transposase of IS4/5 family (DUF4096) I635_21969 PF00665 Integrase core domain I635_21974 PF01695 IstB-like ATP binding protein I635_21989 PF03707 Bacterial signalling protein N terminal repeat I635_21989 PF00990 Diguanylate cyclase, GGDEF domain I635_21989 PF00563 EAL domain I635_22004 PF00990 Diguanylate cyclase, GGDEF domain I635_22004 PF08448 PAS fold I635_22089 PF13614 AAA domain