I635_00005 SM00382 ATPases associated with a variety of cellular activities I635_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain I635_00010 SM00480 DNA polymerase III beta subunit I635_00020 SM00387 Histidine kinase-like ATPases I635_00020 SM00433 TopoisomeraseII I635_00030 SM00836 DALR anticodon binding domain I635_00070 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs I635_00070 SM00474 3'-5' exonuclease I635_00070 SM00475 5'-3' exonuclease I635_00070 SM00482 DNA polymerase A domain I635_00105 SM00257 Lysin motif I635_00180 SM00481 DNA polymerase alpha chain like domain I635_00270 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain I635_00270 SM01232 I635_00270 I635_00300 SM00052 Putative diguanylate phosphodiesterase I635_00300 SM00267 diguanylate cyclase I635_00310 SM00829 Enoylreductase I635_00315 SM00450 Rhodanese Homology Domain I635_00345 SM00530 Helix-turn-helix XRE-family like proteins I635_00360 SM00052 Putative diguanylate phosphodiesterase I635_00360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I635_00360 SM00267 diguanylate cyclase I635_00375 SM00530 Helix-turn-helix XRE-family like proteins I635_00410 SM00849 Metallo-beta-lactamase superfamily I635_00435 SM00382 ATPases associated with a variety of cellular activities I635_00440 SM00382 ATPases associated with a variety of cellular activities I635_00460 SM00450 Rhodanese Homology Domain I635_00465 SM00849 Metallo-beta-lactamase superfamily I635_00485 SM00421 helix_turn_helix, Lux Regulon I635_00545 SM00490 helicase superfamily c-terminal domain I635_00560 SM00487 DEAD-like helicases superfamily I635_00575 SM00382 ATPases associated with a variety of cellular activities I635_00605 SM00849 Metallo-beta-lactamase superfamily I635_00635 SM00876 Biotin and Thiamin Synthesis associated domain I635_00685 SM00267 diguanylate cyclase I635_00700 SM00072 Guanylate kinase homologues. I635_00705 SM01409 I635_00705 I635_00710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I635_00710 SM00954 Region found in RelA / SpoT proteins I635_00725 SM00487 DEAD-like helicases superfamily I635_00725 SM00490 helicase superfamily c-terminal domain I635_00760 SM00382 ATPases associated with a variety of cellular activities I635_00825 SM00422 helix_turn_helix, mercury resistance I635_00850 SM00052 Putative diguanylate phosphodiesterase I635_00850 SM01034 Sensors of blue-light using FAD I635_00875 SM00271 DnaJ molecular chaperone homology domain I635_00915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_00935 SM00052 Putative diguanylate phosphodiesterase I635_00935 SM00267 diguanylate cyclase I635_00950 SM00341 Helicase and RNase D C-terminal I635_00950 SM00487 DEAD-like helicases superfamily I635_00950 SM00490 helicase superfamily c-terminal domain I635_00950 SM00956 I635_00950 I635_00955 SM00924 MgtE intracellular N domain I635_00965 SM00267 diguanylate cyclase I635_00965 SM00448 cheY-homologous receiver domain I635_00975 SM00971 Serine acetyltransferase, N-terminal I635_01015 SM00014 Acid phosphatase homologues I635_01055 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I635_01105 SM00354 helix_turn _helix lactose operon repressor I635_01175 SM00420 helix_turn_helix, Deoxyribose operon repressor I635_01175 SM01134 I635_01175 I635_01215 SM00965 Secretin and TonB N terminus short domain I635_01225 SM00028 Tetratricopeptide repeats I635_01230 SM00382 ATPases associated with a variety of cellular activities I635_01300 SM00316 Ribosomal protein S1-like RNA-binding domain I635_01330 SM01038 Beta galactosidase small chain I635_01335 SM00448 cheY-homologous receiver domain I635_01335 SM00862 Transcriptional regulatory protein, C terminal I635_01340 SM00387 Histidine kinase-like ATPases I635_01365 SM00478 endonuclease III I635_01365 SM00525 I635_01365 I635_01390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_01390 SM00387 Histidine kinase-like ATPases I635_01390 SM00388 His Kinase A (phosphoacceptor) domain I635_01395 SM00448 cheY-homologous receiver domain I635_01395 SM00862 Transcriptional regulatory protein, C terminal I635_01575 SM00422 helix_turn_helix, mercury resistance I635_01695 SM00448 cheY-homologous receiver domain I635_01695 SM00862 Transcriptional regulatory protein, C terminal I635_01700 SM00387 Histidine kinase-like ATPases I635_01735 SM00422 helix_turn_helix, mercury resistance I635_01880 SM00354 helix_turn _helix lactose operon repressor I635_01895 SM00267 diguanylate cyclase I635_01920 SM00342 helix_turn_helix, arabinose operon control protein I635_01920 SM00387 Histidine kinase-like ATPases I635_01920 SM00388 His Kinase A (phosphoacceptor) domain I635_01920 SM00448 cheY-homologous receiver domain I635_01935 SM00354 helix_turn _helix lactose operon repressor I635_01985 SM00855 Phosphoglycerate mutase family I635_02000 SM00671 Sel1-like repeats. I635_02005 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I635_02005 SM00382 ATPases associated with a variety of cellular activities I635_02010 SM01403 I635_02010 I635_02030 SM01382 I635_02030 I635_02030 SM01383 I635_02030 I635_02045 SM00322 K homology RNA-binding domain I635_02095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_02095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_02120 SM00487 DEAD-like helicases superfamily I635_02120 SM00490 helicase superfamily c-terminal domain I635_02150 SM00342 helix_turn_helix, arabinose operon control protein I635_02160 SM00938 Nitrogen regulatory protein P-II I635_02180 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain I635_02215 SM00073 Histidine Phosphotransfer domain I635_02215 SM00387 Histidine kinase-like ATPases I635_02215 SM00388 His Kinase A (phosphoacceptor) domain I635_02215 SM00448 cheY-homologous receiver domain I635_02220 SM00434 DNA Topoisomerase IV I635_02230 SM00052 Putative diguanylate phosphodiesterase I635_02230 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I635_02230 SM00091 PAS domain I635_02230 SM00267 diguanylate cyclase I635_02235 SM01150 I635_02235 I635_02310 SM00965 Secretin and TonB N terminus short domain I635_02330 SM00842 Cell division protein FtsA I635_02340 SM00919 Malic enzyme, NAD binding domain I635_02340 SM01274 I635_02340 I635_02365 SM01060 I635_02365 I635_02380 SM00052 Putative diguanylate phosphodiesterase I635_02410 SM00859 Semialdehyde dehydrogenase, NAD binding domain I635_02415 SM00851 MGS-like domain I635_02425 SM00448 cheY-homologous receiver domain I635_02425 SM00862 Transcriptional regulatory protein, C terminal I635_02430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_02430 SM00387 Histidine kinase-like ATPases I635_02430 SM00388 His Kinase A (phosphoacceptor) domain I635_02465 SM00450 Rhodanese Homology Domain I635_02505 SM00479 I635_02505 I635_02570 SM00267 diguanylate cyclase I635_02575 SM01004 Delta-aminolevulinic acid dehydratase I635_02585 SM00487 DEAD-like helicases superfamily I635_02585 SM00490 helicase superfamily c-terminal domain I635_02595 SM00357 Cold shock protein domain I635_02595 SM00382 ATPases associated with a variety of cellular activities I635_02595 SM00959 Rho termination factor, N-terminal domain I635_02605 SM00387 Histidine kinase-like ATPases I635_02605 SM00388 His Kinase A (phosphoacceptor) domain I635_02605 SM00448 cheY-homologous receiver domain I635_02615 SM01001 AIR carboxylase I635_02670 SM00788 Adenylosuccinate synthetase I635_02720 SM01005 Alanine racemase, C-terminal domain I635_02745 SM00062 Bacterial periplasmic substrate-binding proteins I635_02775 SM00670 Large family of predicted nucleotide-binding domains I635_02795 SM00530 Helix-turn-helix XRE-family like proteins I635_02955 SM00257 Lysin motif I635_02995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_02995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_02995 SM01049 I635_02995 I635_03015 SM00287 Bacterial SH3 domain homologues I635_03020 SM01118 I635_03020 I635_03030 SM00927 DNA mismatch repair enzyme MutH I635_03040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I635_03060 SM00448 cheY-homologous receiver domain I635_03065 SM00267 diguanylate cyclase I635_03090 SM00487 DEAD-like helicases superfamily I635_03090 SM00490 helicase superfamily c-terminal domain I635_03105 SM00670 Large family of predicted nucleotide-binding domains I635_03120 SM00487 DEAD-like helicases superfamily I635_03120 SM00490 helicase superfamily c-terminal domain I635_03125 SM00028 Tetratricopeptide repeats I635_03165 SM00387 Histidine kinase-like ATPases I635_03165 SM00433 TopoisomeraseII I635_03205 SM00841 Elongation factor P, C-terminal I635_03205 SM01185 I635_03205 I635_03260 SM00014 Acid phosphatase homologues I635_03275 SM01012 I635_03275 I635_03300 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I635_03315 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I635_03315 SM00091 PAS domain I635_03315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_03330 SM00382 ATPases associated with a variety of cellular activities I635_03390 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I635_03395 SM01007 Class II Aldolase and Adducin N-terminal domain I635_03425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_03425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_03435 SM00400 zinc finger I635_03435 SM00493 I635_03435 I635_03435 SM00766 DNA primase DnaG DnaB-binding I635_03465 SM01207 I635_03465 I635_03470 SM00905 Dihydroneopterin aldolase I635_03505 SM00530 Helix-turn-helix XRE-family like proteins I635_03515 SM00387 Histidine kinase-like ATPases I635_03520 SM00448 cheY-homologous receiver domain I635_03520 SM00862 Transcriptional regulatory protein, C terminal I635_03525 SM00387 Histidine kinase-like ATPases I635_03525 SM00388 His Kinase A (phosphoacceptor) domain I635_03535 SM00710 Parallel beta-helix repeats I635_03570 SM00028 Tetratricopeptide repeats I635_03575 SM00448 cheY-homologous receiver domain I635_03575 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I635_03580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I635_03580 SM00091 PAS domain I635_03580 SM00387 Histidine kinase-like ATPases I635_03580 SM00388 His Kinase A (phosphoacceptor) domain I635_03580 SM00448 cheY-homologous receiver domain I635_03635 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_03635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_03650 SM00650 Ribosomal RNA adenine dimethylases I635_03670 SM00271 DnaJ molecular chaperone homology domain I635_03715 SM00954 Region found in RelA / SpoT proteins I635_03745 SM00822 I635_03745 I635_03750 SM01236 I635_03750 I635_03795 SM00387 Histidine kinase-like ATPases I635_03795 SM00388 His Kinase A (phosphoacceptor) domain I635_03800 SM00448 cheY-homologous receiver domain I635_03800 SM00862 Transcriptional regulatory protein, C terminal I635_03845 SM00116 Domain in cystathionine beta-synthase and other proteins. I635_03845 SM00924 MgtE intracellular N domain I635_03875 SM00382 ATPases associated with a variety of cellular activities I635_03905 SM00382 ATPases associated with a variety of cellular activities I635_03940 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I635_03945 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I635_04005 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I635_04005 SM00091 PAS domain I635_04005 SM00387 Histidine kinase-like ATPases I635_04005 SM00388 His Kinase A (phosphoacceptor) domain I635_04005 SM00448 cheY-homologous receiver domain I635_04030 SM00861 Transketolase, pyrimidine binding domain I635_04035 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I635_04100 SM00382 ATPases associated with a variety of cellular activities I635_04135 SM00347 helix_turn_helix multiple antibiotic resistance protein I635_04145 SM01263 I635_04145 I635_04165 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I635_04165 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_04210 SM00345 helix_turn_helix gluconate operon transcriptional repressor I635_04210 SM00866 I635_04210 I635_04250 SM00382 ATPases associated with a variety of cellular activities I635_04380 SM00382 ATPases associated with a variety of cellular activities I635_04415 SM00487 DEAD-like helicases superfamily I635_04450 SM00850 LytTr DNA-binding domain I635_04465 SM00448 cheY-homologous receiver domain I635_04470 SM00091 PAS domain I635_04490 SM00729 Elongator protein 3, MiaB family, Radical SAM I635_04500 SM00487 DEAD-like helicases superfamily I635_04500 SM00490 helicase superfamily c-terminal domain I635_04510 SM00382 ATPases associated with a variety of cellular activities I635_04520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I635_04535 SM01329 I635_04535 I635_04540 SM00917 LeuA allosteric (dimerisation) domain I635_04550 SM01192 I635_04550 I635_04550 SM01193 I635_04550 I635_04560 SM00533 DNA-binding domain of DNA mismatch repair MUTS family I635_04560 SM00534 ATPase domain of DNA mismatch repair MUTS family I635_04570 SM00382 ATPases associated with a variety of cellular activities I635_04575 SM00382 ATPases associated with a variety of cellular activities I635_04595 SM00382 ATPases associated with a variety of cellular activities I635_04665 SM00382 ATPases associated with a variety of cellular activities I635_04705 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I635_04710 SM01329 I635_04710 I635_04730 SM00267 diguanylate cyclase I635_04790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I635_04835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I635_04845 SM00935 Outer membrane protein (OmpH-like) I635_04870 SM00481 DNA polymerase alpha chain like domain I635_04880 SM00977 TilS substrate C-terminal domain I635_04885 SM00267 diguanylate cyclase I635_04910 SM00062 Bacterial periplasmic substrate-binding proteins I635_04915 SM01211 I635_04915 I635_04970 SM00421 helix_turn_helix, Lux Regulon I635_05005 SM00858 I635_05005 I635_05010 SM00260 Two component signalling adaptor domain I635_05010 SM00448 cheY-homologous receiver domain I635_05015 SM00138 Methyltransferase, chemotaxis proteins I635_05060 SM00047 Lysozyme subfamily 2 I635_05140 SM00858 I635_05140 I635_05155 SM00822 I635_05155 I635_05235 SM00382 ATPases associated with a variety of cellular activities I635_05240 SM00387 Histidine kinase-like ATPases I635_05240 SM00388 His Kinase A (phosphoacceptor) domain I635_05245 SM00382 ATPases associated with a variety of cellular activities I635_05245 SM00448 cheY-homologous receiver domain I635_05270 SM00382 ATPases associated with a variety of cellular activities I635_05330 SM00382 ATPases associated with a variety of cellular activities I635_05330 SM00962 SRP54-type protein, GTPase domain I635_05345 SM00448 cheY-homologous receiver domain I635_05355 SM00073 Histidine Phosphotransfer domain I635_05355 SM00260 Two component signalling adaptor domain I635_05355 SM00387 Histidine kinase-like ATPases I635_05355 SM01231 I635_05355 I635_05360 SM00448 cheY-homologous receiver domain I635_05370 SM00260 Two component signalling adaptor domain I635_05375 SM00260 Two component signalling adaptor domain I635_05395 SM01018 B12 binding domain I635_05420 SM00947 Carbonic anhydrase I635_05455 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I635_05480 SM00382 ATPases associated with a variety of cellular activities I635_05485 SM00382 ATPases associated with a variety of cellular activities I635_05505 SM00382 ATPases associated with a variety of cellular activities I635_05530 SM00091 PAS domain I635_05530 SM00382 ATPases associated with a variety of cellular activities I635_05545 SM00344 helix_turn_helix ASNC type I635_05550 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I635_05585 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I635_05600 SM00028 Tetratricopeptide repeats I635_05635 SM00028 Tetratricopeptide repeats I635_05710 SM00829 Enoylreductase I635_05725 SM00347 helix_turn_helix multiple antibiotic resistance protein I635_05740 SM00530 Helix-turn-helix XRE-family like proteins I635_05790 SM00479 I635_05790 I635_05820 SM00487 DEAD-like helicases superfamily I635_05860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I635_05930 SM00422 helix_turn_helix, mercury resistance I635_05950 SM00422 helix_turn_helix, mercury resistance I635_05955 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I635_06090 SM00382 ATPases associated with a variety of cellular activities I635_06130 SM00382 ATPases associated with a variety of cellular activities I635_06150 SM00327 von Willebrand factor (vWF) type A domain I635_06165 SM00778 Zinc-binding domain of primase-helicase I635_06235 SM00530 Helix-turn-helix XRE-family like proteins I635_06245 SM00836 DALR anticodon binding domain I635_06245 SM01016 Arginyl tRNA synthetase N terminal dom I635_06275 SM00267 diguanylate cyclase I635_06310 SM00937 I635_06310 I635_06365 SM00463 Small MutS-related domain I635_06395 SM00763 PrkA AAA domain I635_06425 SM00965 Secretin and TonB N terminus short domain I635_06440 SM00479 I635_06440 I635_06460 SM00357 Cold shock protein domain I635_06475 SM00478 endonuclease III I635_06485 SM00900 I635_06485 I635_06515 SM00487 DEAD-like helicases superfamily I635_06515 SM00490 helicase superfamily c-terminal domain I635_06595 SM00267 diguanylate cyclase I635_06620 SM00028 Tetratricopeptide repeats I635_06625 SM00327 von Willebrand factor (vWF) type A domain I635_06665 SM00052 Putative diguanylate phosphodiesterase I635_06665 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I635_06665 SM00091 PAS domain I635_06665 SM00267 diguanylate cyclase I635_06675 SM00855 Phosphoglycerate mutase family I635_06685 SM01091 Transporter associated domain I635_06695 SM00382 ATPases associated with a variety of cellular activities I635_06695 SM00962 SRP54-type protein, GTPase domain I635_06695 SM00963 SRP54-type protein, helical bundle domain I635_06745 SM00382 ATPases associated with a variety of cellular activities I635_06795 SM00830 Chorismate mutase type II I635_06800 SM00830 Chorismate mutase type II I635_06805 SM00448 cheY-homologous receiver domain I635_06820 SM00331 Sigma factor PP2C-like phosphatases I635_06820 SM00448 cheY-homologous receiver domain I635_06830 SM00052 Putative diguanylate phosphodiesterase I635_06830 SM00267 diguanylate cyclase I635_06840 SM00387 Histidine kinase-like ATPases I635_06840 SM00388 His Kinase A (phosphoacceptor) domain I635_06850 SM00382 ATPases associated with a variety of cellular activities I635_06850 SM00448 cheY-homologous receiver domain I635_06890 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I635_06895 SM00382 ATPases associated with a variety of cellular activities I635_06965 SM00857 Resolvase, N terminal domain I635_06995 SM00028 Tetratricopeptide repeats I635_06995 SM00387 Histidine kinase-like ATPases I635_06995 SM00388 His Kinase A (phosphoacceptor) domain I635_06995 SM00448 cheY-homologous receiver domain I635_07005 SM00859 Semialdehyde dehydrogenase, NAD binding domain I635_07020 SM00267 diguanylate cyclase I635_07045 SM00116 Domain in cystathionine beta-synthase and other proteins. I635_07085 SM00267 diguanylate cyclase I635_07155 SM00729 Elongator protein 3, MiaB family, Radical SAM I635_07155 SM00876 Biotin and Thiamin Synthesis associated domain I635_07180 SM00226 Low molecular weight phosphatase family I635_07190 SM00382 ATPases associated with a variety of cellular activities I635_07210 SM00382 ATPases associated with a variety of cellular activities I635_07215 SM00729 Elongator protein 3, MiaB family, Radical SAM I635_07225 SM00028 Tetratricopeptide repeats I635_07225 SM00448 cheY-homologous receiver domain I635_07270 SM00382 ATPases associated with a variety of cellular activities I635_07285 SM00905 Dihydroneopterin aldolase I635_07295 SM00387 Histidine kinase-like ATPases I635_07300 SM00448 cheY-homologous receiver domain I635_07300 SM00862 Transcriptional regulatory protein, C terminal I635_07370 SM00363 S4 RNA-binding domain I635_07380 SM01266 I635_07380 I635_07395 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins I635_07405 SM00382 ATPases associated with a variety of cellular activities I635_07470 SM00421 helix_turn_helix, Lux Regulon I635_07470 SM00448 cheY-homologous receiver domain I635_07475 SM00387 Histidine kinase-like ATPases I635_07475 SM00388 His Kinase A (phosphoacceptor) domain I635_07475 SM00448 cheY-homologous receiver domain I635_07490 SM00271 DnaJ molecular chaperone homology domain I635_07500 SM00052 Putative diguanylate phosphodiesterase I635_07500 SM00091 PAS domain I635_07500 SM00267 diguanylate cyclase I635_07520 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain I635_07525 SM00851 MGS-like domain I635_07525 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain I635_07575 SM00116 Domain in cystathionine beta-synthase and other proteins. I635_07575 SM01091 Transporter associated domain I635_07590 SM00729 Elongator protein 3, MiaB family, Radical SAM I635_07645 SM00903 Flavin reductase like domain I635_07690 SM00829 Enoylreductase I635_07705 SM01400 I635_07705 I635_07725 SM00937 I635_07725 I635_07775 SM00838 Elongation factor G C-terminus I635_07775 SM00889 Elongation factor G, domain IV I635_07780 SM01116 I635_07780 I635_07790 SM00219 Tyrosine kinase, catalytic domain I635_07790 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain I635_07800 SM00460 Transglutaminase/protease-like homologues I635_07830 SM00052 Putative diguanylate phosphodiesterase I635_07830 SM00267 diguanylate cyclase I635_07905 SM00347 helix_turn_helix multiple antibiotic resistance protein I635_07915 SM00864 Tubulin/FtsZ family, GTPase domain I635_07915 SM00865 Tubulin/FtsZ family, C-terminal domain I635_07925 SM00052 Putative diguanylate phosphodiesterase I635_07925 SM00091 PAS domain I635_07925 SM00267 diguanylate cyclase I635_07930 SM00052 Putative diguanylate phosphodiesterase I635_07930 SM00267 diguanylate cyclase I635_07960 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I635_07975 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I635_07975 SM00091 PAS domain I635_07975 SM00267 diguanylate cyclase I635_08005 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I635_08010 SM01092 CO dehydrogenase flavoprotein C-terminal domain I635_08050 SM00448 cheY-homologous receiver domain I635_08060 SM00267 diguanylate cyclase I635_08065 SM00387 Histidine kinase-like ATPases I635_08065 SM00388 His Kinase A (phosphoacceptor) domain I635_08065 SM00448 cheY-homologous receiver domain I635_08155 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain I635_08225 SM00052 Putative diguanylate phosphodiesterase I635_08225 SM00267 diguanylate cyclase I635_08305 SM00873 B3/4 domain I635_08305 SM00874 tRNA synthetase B5 domain I635_08305 SM00896 Ferredoxin-fold anticodon binding domain I635_08310 SM00411 bacterial (prokaryotic) histone like domain I635_08345 SM00487 DEAD-like helicases superfamily I635_08345 SM00490 helicase superfamily c-terminal domain I635_08345 SM00982 I635_08345 I635_08345 SM01058 CarD-like/TRCF domain I635_08365 SM00387 Histidine kinase-like ATPases I635_08370 SM00897 FIST N domain I635_08370 SM01204 I635_08370 I635_08455 SM00878 Biotin carboxylase C-terminal domain I635_08475 SM00422 helix_turn_helix, mercury resistance I635_08495 SM00062 Bacterial periplasmic substrate-binding proteins I635_08495 SM00267 diguanylate cyclase I635_08550 SM00843 I635_08550 I635_08595 SM00421 helix_turn_helix, Lux Regulon I635_08610 SM01040 BRO family, N-terminal domain I635_08870 SM00387 Histidine kinase-like ATPases I635_08870 SM00388 His Kinase A (phosphoacceptor) domain I635_08870 SM00448 cheY-homologous receiver domain I635_08880 SM00116 Domain in cystathionine beta-synthase and other proteins. I635_08905 SM00267 diguanylate cyclase I635_08910 SM00342 helix_turn_helix, arabinose operon control protein I635_08920 SM00382 ATPases associated with a variety of cellular activities I635_08920 SM00487 DEAD-like helicases superfamily I635_08920 SM00490 helicase superfamily c-terminal domain I635_08920 SM00847 Helicase associated domain (HA2) Add an annotation I635_08935 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I635_08940 SM00829 Enoylreductase I635_08950 SM00479 I635_08950 I635_08960 SM00052 Putative diguanylate phosphodiesterase I635_08965 SM00382 ATPases associated with a variety of cellular activities I635_08980 SM00634 Bacterial Ig-like domain (group 1) I635_08995 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain I635_08995 SM00437 Bacterial DNA topoisomerase I DNA-binding domain I635_08995 SM00493 I635_08995 I635_09035 SM00587 ZnF_C4 abd HLH domain containing kinases domain I635_09040 SM00316 Ribosomal protein S1-like RNA-binding domain I635_09045 SM00363 S4 RNA-binding domain I635_09080 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. I635_09085 SM00822 I635_09085 I635_09095 SM00825 Beta-ketoacyl synthase I635_09135 SM00267 diguanylate cyclase I635_09245 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I635_09245 SM00091 PAS domain I635_09245 SM00387 Histidine kinase-like ATPases I635_09245 SM00388 His Kinase A (phosphoacceptor) domain I635_09245 SM00448 cheY-homologous receiver domain I635_09250 SM00448 cheY-homologous receiver domain I635_09250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I635_09260 SM00316 Ribosomal protein S1-like RNA-binding domain I635_09285 SM01387 I635_09285 I635_09290 SM00363 S4 RNA-binding domain I635_09310 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I635_09320 SM00448 cheY-homologous receiver domain I635_09385 SM00729 Elongator protein 3, MiaB family, Radical SAM I635_09425 SM00382 ATPases associated with a variety of cellular activities I635_09455 SM00267 diguanylate cyclase I635_09475 SM00857 Resolvase, N terminal domain I635_09520 SM00347 helix_turn_helix multiple antibiotic resistance protein I635_09545 SM00028 Tetratricopeptide repeats I635_09570 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I635_09600 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. I635_09605 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain I635_09635 SM00357 Cold shock protein domain I635_09645 SM00382 ATPases associated with a variety of cellular activities I635_09645 SM01086 C-terminal, D2-small domain, of ClpB protein I635_09650 SM00316 Ribosomal protein S1-like RNA-binding domain I635_09675 SM00731 SprT homologues. I635_09705 SM00870 I635_09705 I635_09710 SM00729 Elongator protein 3, MiaB family, Radical SAM I635_09725 SM00936 Penicillin-binding protein 5, C-terminal domain I635_09795 SM00267 diguanylate cyclase I635_09805 SM01103 I635_09805 I635_09815 SM00382 ATPases associated with a variety of cellular activities I635_09840 SM00052 Putative diguanylate phosphodiesterase I635_09840 SM00267 diguanylate cyclase I635_09840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_09855 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I635_09860 SM00046 Diacylglycerol kinase catalytic domain (presumed) I635_09860 SM00195 Dual specificity phosphatase, catalytic domain I635_09860 SM00404 Protein tyrosine phosphatase, catalytic domain motif I635_09925 SM00507 HNH nucleases I635_09930 SM00316 Ribosomal protein S1-like RNA-binding domain I635_09930 SM00322 K homology RNA-binding domain I635_10005 SM01321 I635_10005 I635_10020 SM00382 ATPases associated with a variety of cellular activities I635_10160 SM00028 Tetratricopeptide repeats I635_10180 SM00771 ZipA, C-terminal domain (FtsZ-binding) I635_10185 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I635_10185 SM00292 breast cancer carboxy-terminal domain I635_10185 SM00532 Ligase N family I635_10200 SM00849 Metallo-beta-lactamase superfamily I635_10205 SM00382 ATPases associated with a variety of cellular activities I635_10230 SM00729 Elongator protein 3, MiaB family, Radical SAM I635_10295 SM00861 Transketolase, pyrimidine binding domain I635_10310 SM00881 CoA binding domain I635_10350 SM00642 Alpha-amylase domain I635_10355 SM00642 Alpha-amylase domain I635_10365 SM00642 Alpha-amylase domain I635_10370 SM00354 helix_turn _helix lactose operon repressor I635_10490 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I635_10505 SM00387 Histidine kinase-like ATPases I635_10510 SM00448 cheY-homologous receiver domain I635_10510 SM00850 LytTr DNA-binding domain I635_10530 SM00450 Rhodanese Homology Domain I635_10530 SM00849 Metallo-beta-lactamase superfamily I635_10545 SM00028 Tetratricopeptide repeats I635_10545 SM00448 cheY-homologous receiver domain I635_10555 SM00450 Rhodanese Homology Domain I635_10560 SM00054 EF-hand, calcium binding motif I635_10565 SM00487 DEAD-like helicases superfamily I635_10565 SM00490 helicase superfamily c-terminal domain I635_10570 SM00882 Coenzyme A transferase I635_10575 SM00882 Coenzyme A transferase I635_10590 SM00387 Histidine kinase-like ATPases I635_10640 SM00861 Transketolase, pyrimidine binding domain I635_10655 SM00220 Serine/Threonine protein kinases, catalytic domain I635_10690 SM00945 ProQ/FINO family I635_10695 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. I635_10695 SM00245 tail specific protease I635_10750 SM00981 I635_10750 I635_10760 SM00382 ATPases associated with a variety of cellular activities I635_10905 SM00100 Cyclic nucleotide-monophosphate binding domain I635_10905 SM00419 helix_turn_helix, cAMP Regulatory protein I635_10930 SM00047 Lysozyme subfamily 2 I635_10950 SM00450 Rhodanese Homology Domain I635_10960 SM01144 I635_10960 I635_10970 SM00278 Helix-hairpin-helix DNA-binding motif class 1 I635_10970 SM00465 GIY-YIG type nucleases (URI domain) I635_10975 SM00421 helix_turn_helix, Lux Regulon I635_10975 SM00448 cheY-homologous receiver domain I635_11065 SM00382 ATPases associated with a variety of cellular activities I635_11075 SM00843 I635_11075 I635_11080 SM00344 helix_turn_helix ASNC type I635_11085 SM01002 Alanine dehydrogenase/PNT, C-terminal domain I635_11085 SM01003 Alanine dehydrogenase/PNT, N-terminal domain I635_11090 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family I635_11110 SM00411 bacterial (prokaryotic) histone like domain I635_11115 SM00316 Ribosomal protein S1-like RNA-binding domain I635_11135 SM00434 DNA Topoisomerase IV I635_11170 SM00052 Putative diguanylate phosphodiesterase I635_11170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I635_11170 SM00267 diguanylate cyclase I635_11190 SM01130 I635_11190 I635_11270 SM00421 helix_turn_helix, Lux Regulon I635_11270 SM00448 cheY-homologous receiver domain I635_11300 SM00642 Alpha-amylase domain I635_11310 SM00852 Probable molybdopterin binding domain I635_11330 SM00382 ATPases associated with a variety of cellular activities I635_11370 SM00530 Helix-turn-helix XRE-family like proteins I635_11440 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. I635_11450 SM00563 Phosphate acyltransferases I635_11490 SM00342 helix_turn_helix, arabinose operon control protein I635_11530 SM00893 Electron transfer flavoprotein domain I635_11535 SM00893 Electron transfer flavoprotein domain I635_11545 SM00528 Domain in histone-like proteins of HNS family I635_11565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_11565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_11580 SM00797 Allophanate hydrolase subunit 2 I635_11585 SM00796 Allophanate hydrolase subunit 1 I635_11640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I635_11685 SM00342 helix_turn_helix, arabinose operon control protein I635_11700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I635_11730 SM00829 Enoylreductase I635_11745 SM00855 Phosphoglycerate mutase family I635_11770 SM00729 Elongator protein 3, MiaB family, Radical SAM I635_11775 SM00382 ATPases associated with a variety of cellular activities I635_11805 SM00852 Probable molybdopterin binding domain I635_11930 SM00052 Putative diguanylate phosphodiesterase I635_11930 SM00267 diguanylate cyclase I635_11935 SM00849 Metallo-beta-lactamase superfamily I635_11970 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I635_11975 SM00450 Rhodanese Homology Domain I635_11990 SM00382 ATPases associated with a variety of cellular activities I635_11990 SM00448 cheY-homologous receiver domain I635_12000 SM00387 Histidine kinase-like ATPases I635_12000 SM00388 His Kinase A (phosphoacceptor) domain I635_12005 SM00448 cheY-homologous receiver domain I635_12010 SM00387 Histidine kinase-like ATPases I635_12010 SM00388 His Kinase A (phosphoacceptor) domain I635_12010 SM00448 cheY-homologous receiver domain I635_12080 SM00631 I635_12080 I635_12085 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I635_12100 SM01350 I635_12100 I635_12105 SM00642 Alpha-amylase domain I635_12110 SM00642 Alpha-amylase domain I635_12120 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain I635_12170 SM00342 helix_turn_helix, arabinose operon control protein I635_12180 SM00893 Electron transfer flavoprotein domain I635_12185 SM00893 Electron transfer flavoprotein domain I635_12260 SM00749 bacterial OsmY and nodulation domain I635_12335 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_12335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_12360 SM00052 Putative diguanylate phosphodiesterase I635_12360 SM00267 diguanylate cyclase I635_12370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I635_12375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I635_12375 SM00387 Histidine kinase-like ATPases I635_12495 SM00849 Metallo-beta-lactamase superfamily I635_12500 SM00257 Lysin motif I635_12525 SM00840 I635_12525 I635_12545 SM00244 prohibitin homologues I635_12555 SM00642 Alpha-amylase domain I635_12565 SM00829 Enoylreductase I635_12570 SM01060 I635_12570 I635_12575 SM00829 Enoylreductase I635_12590 SM00539 Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins. I635_12650 SM00859 Semialdehyde dehydrogenase, NAD binding domain I635_12660 SM01007 Class II Aldolase and Adducin N-terminal domain I635_12665 SM00100 Cyclic nucleotide-monophosphate binding domain I635_12665 SM00419 helix_turn_helix, cAMP Regulatory protein I635_12685 SM00825 Beta-ketoacyl synthase I635_12735 SM00422 helix_turn_helix, mercury resistance I635_12740 SM00829 Enoylreductase I635_12770 SM00382 ATPases associated with a variety of cellular activities I635_12780 SM00387 Histidine kinase-like ATPases I635_12780 SM00388 His Kinase A (phosphoacceptor) domain I635_12780 SM00448 cheY-homologous receiver domain I635_12900 SM00345 helix_turn_helix gluconate operon transcriptional repressor I635_12945 SM00341 Helicase and RNase D C-terminal I635_12945 SM00474 3'-5' exonuclease I635_12975 SM00487 DEAD-like helicases superfamily I635_12975 SM00488 I635_12975 I635_12975 SM00491 I635_12975 I635_12985 SM00014 Acid phosphatase homologues I635_13000 SM00642 Alpha-amylase domain I635_13125 SM00387 Histidine kinase-like ATPases I635_13130 SM00493 I635_13130 I635_13140 SM00448 cheY-homologous receiver domain I635_13150 SM00382 ATPases associated with a variety of cellular activities I635_13175 SM00862 Transcriptional regulatory protein, C terminal I635_13185 SM00091 PAS domain I635_13185 SM00267 diguanylate cyclase I635_13205 SM00028 Tetratricopeptide repeats I635_13215 SM00382 ATPases associated with a variety of cellular activities I635_13215 SM01086 C-terminal, D2-small domain, of ClpB protein I635_13225 SM00363 S4 RNA-binding domain I635_13295 SM00861 Transketolase, pyrimidine binding domain I635_13350 SM00382 ATPases associated with a variety of cellular activities I635_13360 SM00382 ATPases associated with a variety of cellular activities I635_13395 SM00358 Double-stranded RNA binding motif I635_13395 SM00535 Ribonuclease III family I635_13405 SM00838 Elongation factor G C-terminus I635_13460 SM00938 Nitrogen regulatory protein P-II I635_13545 SM00904 Riboflavin kinase I635_13590 SM00563 Phosphate acyltransferases I635_13610 SM00411 bacterial (prokaryotic) histone like domain I635_13620 SM00382 ATPases associated with a variety of cellular activities I635_13620 SM00464 Found in ATP-dependent protease La (LON) I635_13625 SM00382 ATPases associated with a variety of cellular activities I635_13625 SM00994 ClpX C4-type zinc finger I635_13625 SM01086 C-terminal, D2-small domain, of ClpB protein I635_13675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_13685 SM00116 Domain in cystathionine beta-synthase and other proteins. I635_13685 SM01240 I635_13685 I635_13705 SM00382 ATPases associated with a variety of cellular activities I635_13710 SM00564 beta-propeller repeat I635_13715 SM00028 Tetratricopeptide repeats I635_13735 SM00028 Tetratricopeptide repeats I635_13735 SM00257 Lysin motif I635_13745 SM00562 I635_13745 I635_13775 SM00382 ATPases associated with a variety of cellular activities I635_13820 SM00850 LytTr DNA-binding domain I635_13835 SM01323 I635_13835 I635_13900 SM00382 ATPases associated with a variety of cellular activities I635_13920 SM00098 Alkaline phosphatase homologues I635_13925 SM00260 Two component signalling adaptor domain I635_13925 SM00448 cheY-homologous receiver domain I635_13990 SM00028 Tetratricopeptide repeats I635_14015 SM00984 UDP binding domain I635_14145 SM00382 ATPases associated with a variety of cellular activities I635_14235 SM00052 Putative diguanylate phosphodiesterase I635_14235 SM00267 diguanylate cyclase I635_14250 SM00354 helix_turn _helix lactose operon repressor I635_14290 SM00967 RNA 2'-O ribose methyltransferase substrate binding I635_14365 SM00953 I635_14365 I635_14385 SM00448 cheY-homologous receiver domain I635_14385 SM00862 Transcriptional regulatory protein, C terminal I635_14390 SM00387 Histidine kinase-like ATPases I635_14390 SM00388 His Kinase A (phosphoacceptor) domain I635_14435 SM01092 CO dehydrogenase flavoprotein C-terminal domain I635_14440 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain I635_14485 SM01322 I635_14485 I635_14530 SM00487 DEAD-like helicases superfamily I635_14530 SM00490 helicase superfamily c-terminal domain I635_14550 SM00028 Tetratricopeptide repeats I635_14550 SM00387 Histidine kinase-like ATPases I635_14550 SM00388 His Kinase A (phosphoacceptor) domain I635_14550 SM00448 cheY-homologous receiver domain I635_14560 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I635_14560 SM00387 Histidine kinase-like ATPases I635_14560 SM00388 His Kinase A (phosphoacceptor) domain I635_14560 SM00448 cheY-homologous receiver domain I635_14580 SM00448 cheY-homologous receiver domain I635_14580 SM00862 Transcriptional regulatory protein, C terminal I635_14585 SM00388 His Kinase A (phosphoacceptor) domain I635_14595 SM00530 Helix-turn-helix XRE-family like proteins I635_14605 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase I635_14615 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins I635_14625 SM00244 prohibitin homologues I635_14645 SM00382 ATPases associated with a variety of cellular activities I635_14655 SM00696 Repeats found in Drosophila proteins. I635_14685 SM00422 helix_turn_helix, mercury resistance I635_14695 SM00342 helix_turn_helix, arabinose operon control protein I635_14760 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I635_14785 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I635_14785 SM00382 ATPases associated with a variety of cellular activities I635_14865 SM01011 Aminopeptidase P, N-terminal domain I635_14885 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. I635_14885 SM00387 Histidine kinase-like ATPases I635_14885 SM00388 His Kinase A (phosphoacceptor) domain I635_14885 SM00448 cheY-homologous receiver domain I635_14965 SM00345 helix_turn_helix gluconate operon transcriptional repressor I635_14965 SM00895 I635_14965 I635_14975 SM00644 I635_14975 I635_15030 SM00957 SecA DEAD-like domain I635_15030 SM00958 SecA preprotein cross-linking domain I635_15045 SM00864 Tubulin/FtsZ family, GTPase domain I635_15045 SM00865 Tubulin/FtsZ family, C-terminal domain I635_15050 SM00842 Cell division protein FtsA I635_15180 SM00028 Tetratricopeptide repeats I635_15180 SM00267 diguanylate cyclase I635_15190 SM00382 ATPases associated with a variety of cellular activities I635_15190 SM00448 cheY-homologous receiver domain I635_15195 SM00387 Histidine kinase-like ATPases I635_15245 SM00732 Likely ribonuclease with RNase H fold. I635_15255 SM00382 ATPases associated with a variety of cellular activities I635_15335 SM00530 Helix-turn-helix XRE-family like proteins I635_15345 SM00360 RNA recognition motif I635_15380 SM00986 Uracil DNA glycosylase superfamily I635_15380 SM00987 UreE urease accessory protein, C-terminal domain I635_15400 SM00382 ATPases associated with a variety of cellular activities I635_15410 SM00829 Enoylreductase I635_15420 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor I635_15425 SM00226 Low molecular weight phosphatase family I635_15440 SM00448 cheY-homologous receiver domain I635_15450 SM00448 cheY-homologous receiver domain I635_15450 SM00862 Transcriptional regulatory protein, C terminal I635_15455 SM00387 Histidine kinase-like ATPases I635_15455 SM00388 His Kinase A (phosphoacceptor) domain I635_15550 SM00749 bacterial OsmY and nodulation domain I635_15575 SM00421 helix_turn_helix, Lux Regulon I635_15575 SM00448 cheY-homologous receiver domain I635_15595 SM00345 helix_turn_helix gluconate operon transcriptional repressor I635_15595 SM00895 I635_15595 I635_15620 SM00267 diguanylate cyclase I635_15620 SM00448 cheY-homologous receiver domain I635_15665 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I635_15665 SM00091 PAS domain I635_15665 SM00387 Histidine kinase-like ATPases I635_15665 SM00388 His Kinase A (phosphoacceptor) domain I635_15665 SM00448 cheY-homologous receiver domain I635_15670 SM00287 Bacterial SH3 domain homologues I635_15670 SM00644 I635_15670 I635_15710 SM00450 Rhodanese Homology Domain I635_15860 SM00448 cheY-homologous receiver domain I635_15875 SM01230 I635_15875 I635_15885 SM00091 PAS domain I635_15885 SM00387 Histidine kinase-like ATPases I635_15885 SM00388 His Kinase A (phosphoacceptor) domain I635_15890 SM00382 ATPases associated with a variety of cellular activities I635_15890 SM00448 cheY-homologous receiver domain I635_15895 SM00073 Histidine Phosphotransfer domain I635_15900 SM00563 Phosphate acyltransferases I635_15930 SM00244 prohibitin homologues I635_15940 SM00387 Histidine kinase-like ATPases I635_15940 SM00388 His Kinase A (phosphoacceptor) domain I635_15940 SM00448 cheY-homologous receiver domain I635_15940 SM01358 I635_15940 I635_16045 SM00382 ATPases associated with a variety of cellular activities I635_16065 SM00530 Helix-turn-helix XRE-family like proteins I635_16155 SM00028 Tetratricopeptide repeats I635_16170 SM00345 helix_turn_helix gluconate operon transcriptional repressor I635_16170 SM00895 I635_16170 I635_16190 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain I635_16210 SM00267 diguanylate cyclase I635_16240 SM00387 Histidine kinase-like ATPases I635_16240 SM00448 cheY-homologous receiver domain I635_16250 SM00886 Stress responsive A/B Barrel Domain I635_16260 SM00382 ATPases associated with a variety of cellular activities I635_16330 SM00849 Metallo-beta-lactamase superfamily I635_16330 SM01027 Beta-Casp domain I635_16345 SM00996 S-adenosyl-L-homocysteine hydrolase I635_16345 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain I635_16370 SM00564 beta-propeller repeat I635_16375 SM00062 Bacterial periplasmic substrate-binding proteins I635_16390 SM00382 ATPases associated with a variety of cellular activities I635_16420 SM00729 Elongator protein 3, MiaB family, Radical SAM I635_16445 SM00421 helix_turn_helix, Lux Regulon I635_16445 SM00448 cheY-homologous receiver domain I635_16450 SM00091 PAS domain I635_16450 SM00387 Histidine kinase-like ATPases I635_16450 SM00388 His Kinase A (phosphoacceptor) domain I635_16450 SM00448 cheY-homologous receiver domain I635_16455 SM00897 FIST N domain I635_16455 SM01204 I635_16455 I635_16460 SM00900 I635_16460 I635_16470 SM00421 helix_turn_helix, Lux Regulon I635_16470 SM00448 cheY-homologous receiver domain I635_16510 SM00965 Secretin and TonB N terminus short domain I635_16535 SM00421 helix_turn_helix, Lux Regulon I635_16565 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins I635_16570 SM00421 helix_turn_helix, Lux Regulon I635_16570 SM00448 cheY-homologous receiver domain I635_16585 SM00487 DEAD-like helicases superfamily I635_16585 SM00490 helicase superfamily c-terminal domain I635_16650 SM00267 diguanylate cyclase I635_16705 SM00966 SpoVT / AbrB like domain I635_16790 SM00345 helix_turn_helix gluconate operon transcriptional repressor I635_16790 SM00895 I635_16790 I635_16820 SM00155 Phospholipase D. Active site motifs. I635_16850 SM00448 cheY-homologous receiver domain I635_16860 SM00387 Histidine kinase-like ATPases I635_16865 SM00849 Metallo-beta-lactamase superfamily I635_16870 SM00486 DNA polymerase type-B family I635_16885 SM00360 RNA recognition motif I635_16920 SM00986 Uracil DNA glycosylase superfamily I635_16920 SM00987 UreE urease accessory protein, C-terminal domain I635_16925 SM00052 Putative diguanylate phosphodiesterase I635_16925 SM00267 diguanylate cyclase I635_16925 SM00448 cheY-homologous receiver domain I635_17005 SM00173 Ras subfamily of RAS small GTPases I635_17005 SM00175 Rab subfamily of small GTPases I635_17010 SM00052 Putative diguanylate phosphodiesterase I635_17010 SM00267 diguanylate cyclase I635_17020 SM00563 Phosphate acyltransferases I635_17025 SM00563 Phosphate acyltransferases I635_17155 SM00052 Putative diguanylate phosphodiesterase I635_17180 SM00849 Metallo-beta-lactamase superfamily I635_17215 SM00530 Helix-turn-helix XRE-family like proteins I635_17235 SM00903 Flavin reductase like domain I635_17270 SM00100 Cyclic nucleotide-monophosphate binding domain I635_17285 SM00849 Metallo-beta-lactamase superfamily I635_17325 SM00900 I635_17325 I635_17415 SM00028 Tetratricopeptide repeats I635_17425 SM00267 diguanylate cyclase I635_17425 SM00448 cheY-homologous receiver domain I635_17430 SM00479 I635_17430 I635_17435 SM00116 Domain in cystathionine beta-synthase and other proteins. I635_17450 SM00387 Histidine kinase-like ATPases I635_17450 SM00388 His Kinase A (phosphoacceptor) domain I635_17450 SM00448 cheY-homologous receiver domain I635_17480 SM00421 helix_turn_helix, Lux Regulon I635_17480 SM00448 cheY-homologous receiver domain I635_17505 SM01358 I635_17505 I635_17515 SM00052 Putative diguanylate phosphodiesterase I635_17515 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) I635_17515 SM00091 PAS domain I635_17515 SM00267 diguanylate cyclase I635_17545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_17595 SM00984 UDP binding domain I635_17735 SM00710 Parallel beta-helix repeats I635_17850 SM00662 RNA polymerases D I635_17855 SM00363 S4 RNA-binding domain I635_17855 SM01390 I635_17855 I635_17920 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I635_17925 SM01374 I635_17925 I635_17930 SM00387 Histidine kinase-like ATPases I635_17930 SM00388 His Kinase A (phosphoacceptor) domain I635_17930 SM00448 cheY-homologous receiver domain I635_17950 SM00967 RNA 2'-O ribose methyltransferase substrate binding I635_17955 SM00316 Ribosomal protein S1-like RNA-binding domain I635_17955 SM00357 Cold shock protein domain I635_17955 SM00955 I635_17955 I635_18000 SM00671 Sel1-like repeats. I635_18040 SM00387 Histidine kinase-like ATPases I635_18040 SM00388 His Kinase A (phosphoacceptor) domain I635_18040 SM00448 cheY-homologous receiver domain I635_18065 SM00344 helix_turn_helix ASNC type I635_18075 SM00357 Cold shock protein domain I635_18105 SM00448 cheY-homologous receiver domain I635_18115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_18115 SM00387 Histidine kinase-like ATPases I635_18115 SM00388 His Kinase A (phosphoacceptor) domain I635_18120 SM00448 cheY-homologous receiver domain I635_18130 SM00926 Molybdopterin oxidoreductase Fe4S4 domain I635_18190 SM00382 ATPases associated with a variety of cellular activities I635_18195 SM00421 helix_turn_helix, Lux Regulon I635_18220 SM00382 ATPases associated with a variety of cellular activities I635_18220 SM01086 C-terminal, D2-small domain, of ClpB protein I635_18235 SM00487 DEAD-like helicases superfamily I635_18235 SM00490 helicase superfamily c-terminal domain I635_18250 SM00919 Malic enzyme, NAD binding domain I635_18250 SM01274 I635_18250 I635_18300 SM00052 Putative diguanylate phosphodiesterase I635_18315 SM00382 ATPases associated with a variety of cellular activities I635_18320 SM00382 ATPases associated with a variety of cellular activities I635_18320 SM00962 SRP54-type protein, GTPase domain I635_18415 SM00382 ATPases associated with a variety of cellular activities I635_18420 SM00448 cheY-homologous receiver domain I635_18420 SM00862 Transcriptional regulatory protein, C terminal I635_18425 SM00387 Histidine kinase-like ATPases I635_18425 SM00388 His Kinase A (phosphoacceptor) domain I635_18435 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. I635_18450 SM00116 Domain in cystathionine beta-synthase and other proteins. I635_18505 SM00838 Elongation factor G C-terminus I635_18505 SM00889 Elongation factor G, domain IV I635_18520 SM00663 RNA polymerase I subunit A N-terminus I635_18545 SM00649 Ribosomal protein L11/L12 I635_18565 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. I635_18565 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. I635_18575 SM00382 ATPases associated with a variety of cellular activities I635_18595 SM00487 DEAD-like helicases superfamily I635_18595 SM00490 helicase superfamily c-terminal domain I635_18630 SM00642 Alpha-amylase domain I635_18670 SM00487 DEAD-like helicases superfamily I635_18670 SM00490 helicase superfamily c-terminal domain I635_18675 SM00849 Metallo-beta-lactamase superfamily I635_18685 SM00841 Elongation factor P, C-terminal I635_18685 SM01185 I635_18685 I635_18760 SM00244 prohibitin homologues I635_18765 SM00244 prohibitin homologues I635_18785 SM01340 I635_18785 I635_18790 SM00257 Lysin motif I635_18790 SM00646 I635_18790 I635_18850 SM00382 ATPases associated with a variety of cellular activities I635_18885 SM00849 Metallo-beta-lactamase superfamily I635_18905 SM00387 Histidine kinase-like ATPases I635_18905 SM00388 His Kinase A (phosphoacceptor) domain I635_18915 SM00382 ATPases associated with a variety of cellular activities I635_18925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_18930 SM00387 Histidine kinase-like ATPases I635_18935 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). I635_18985 SM00354 helix_turn _helix lactose operon repressor I635_19005 SM00267 diguanylate cyclase I635_19060 SM00116 Domain in cystathionine beta-synthase and other proteins. I635_19075 SM00867 YceI-like domain I635_19105 SM00829 Enoylreductase I635_19110 SM00267 diguanylate cyclase I635_19115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_19115 SM00387 Histidine kinase-like ATPases I635_19115 SM00388 His Kinase A (phosphoacceptor) domain I635_19115 SM00448 cheY-homologous receiver domain I635_19135 SM00420 helix_turn_helix, Deoxyribose operon repressor I635_19135 SM01134 I635_19135 I635_19150 SM00267 diguanylate cyclase I635_19165 SM00342 helix_turn_helix, arabinose operon control protein I635_19165 SM01009 AlkA N-terminal domain I635_19195 SM01002 Alanine dehydrogenase/PNT, C-terminal domain I635_19195 SM01003 Alanine dehydrogenase/PNT, N-terminal domain I635_19245 SM00965 Secretin and TonB N terminus short domain I635_19305 SM00670 Large family of predicted nucleotide-binding domains I635_19330 SM00883 Chaperonin 10 Kd subunit I635_19365 SM00878 Biotin carboxylase C-terminal domain I635_19390 SM00479 I635_19390 I635_19390 SM00990 I635_19390 I635_19420 SM00062 Bacterial periplasmic substrate-binding proteins I635_19440 SM00798 AICARFT/IMPCHase bienzyme I635_19440 SM00851 MGS-like domain I635_19450 SM01209 I635_19450 I635_19450 SM01210 I635_19450 I635_19455 SM00047 Lysozyme subfamily 2 I635_19480 SM00448 cheY-homologous receiver domain I635_19480 SM00862 Transcriptional regulatory protein, C terminal I635_19490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain I635_19490 SM00387 Histidine kinase-like ATPases I635_19490 SM00388 His Kinase A (phosphoacceptor) domain I635_19520 SM00363 S4 RNA-binding domain I635_19535 SM00382 ATPases associated with a variety of cellular activities I635_19615 SM00867 YceI-like domain I635_19650 SM00382 ATPases associated with a variety of cellular activities I635_19675 SM00320 WD40 repeats I635_19695 SM00316 Ribosomal protein S1-like RNA-binding domain I635_19695 SM00732 Likely ribonuclease with RNase H fold. I635_19705 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. I635_19725 SM00342 helix_turn_helix, arabinose operon control protein I635_19745 SM00633 Glycosyl hydrolase family 10 I635_19755 SM00861 Transketolase, pyrimidine binding domain I635_19795 SM00710 Parallel beta-helix repeats I635_19805 SM00813 Alpha-L-arabinofuranosidase C-terminus I635_19840 SM00631 I635_19840 I635_19935 SM00563 Phosphate acyltransferases I635_19955 SM00382 ATPases associated with a variety of cellular activities I635_20020 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase I635_20130 SM00530 Helix-turn-helix XRE-family like proteins I635_20140 SM00530 Helix-turn-helix XRE-family like proteins I635_20145 SM00487 DEAD-like helicases superfamily I635_20155 SM00487 DEAD-like helicases superfamily I635_20155 SM00490 helicase superfamily c-terminal domain I635_20170 SM00487 DEAD-like helicases superfamily I635_20195 SM00422 helix_turn_helix, mercury resistance I635_20225 SM00327 von Willebrand factor (vWF) type A domain I635_20230 SM00327 von Willebrand factor (vWF) type A domain I635_20285 SM00342 helix_turn_helix, arabinose operon control protein I635_20370 SM00354 helix_turn _helix lactose operon repressor I635_20385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. I635_20395 SM01144 I635_20395 I635_20415 SM00382 ATPases associated with a variety of cellular activities I635_20455 SM00470 ParB-like nuclease domain I635_20470 SM01228 I635_20470 I635_20475 SM01228 I635_20475 I635_20510 SM01234 I635_20510 I635_20744 SM00530 Helix-turn-helix XRE-family like proteins I635_20769 SM00470 ParB-like nuclease domain I635_21014 SM00974 I635_21014 I635_21199 SM00465 GIY-YIG type nucleases (URI domain) I635_21234 SM00382 ATPases associated with a variety of cellular activities I635_21364 SM00857 Resolvase, N terminal domain I635_21384 SM00530 Helix-turn-helix XRE-family like proteins I635_21394 SM00487 DEAD-like helicases superfamily I635_21564 SM00382 ATPases associated with a variety of cellular activities I635_21584 SM00923 MbtH-like protein I635_21589 SM00823 Phosphopantetheine attachment site I635_21619 SM00822 I635_21619 I635_21619 SM00825 Beta-ketoacyl synthase I635_21624 SM00823 Phosphopantetheine attachment site I635_21649 SM00823 Phosphopantetheine attachment site I635_21974 SM00382 ATPases associated with a variety of cellular activities I635_21989 SM00052 Putative diguanylate phosphodiesterase I635_22004 SM00267 diguanylate cyclase I635_22024 SM01126 I635_22024 I635_22094 SM00470 ParB-like nuclease domain I635_22109 SM00530 Helix-turn-helix XRE-family like proteins