locus-tag class description AV942_00005 PF11638 DnaA N-terminal domain AV942_00005 PF00308 Bacterial dnaA protein AV942_00005 PF08299 Bacterial dnaA protein helix-turn-helix AV942_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AV942_00010 PF02767 DNA polymerase III beta subunit, central domain AV942_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AV942_00015 PF02463 RecF/RecN/SMC N terminal domain AV942_00020 PF01751 Toprim domain AV942_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_00020 PF18053 DNA gyrase B subunit insert domain AV942_00020 PF00986 DNA gyrase B subunit, carboxyl terminus AV942_00020 PF00204 DNA gyrase B AV942_00030 PF02092 Glycyl-tRNA synthetase beta subunit AV942_00030 PF05746 DALR anticodon binding domain AV942_00035 PF02091 Glycyl-tRNA synthetase alpha subunit AV942_00040 PF03352 Methyladenine glycosylase AV942_00050 PF04220 Der GTPase activator (YihI) AV942_00060 PF00034 Cytochrome c AV942_00065 PF01926 50S ribosome-binding GTPase AV942_00070 PF01612 3'-5' exonuclease AV942_00070 PF00476 DNA polymerase family A AV942_00070 PF01367 5'-3' exonuclease, C-terminal SAM fold AV942_00070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AV942_00080 PF02386 Cation transport protein AV942_00085 PF02080 TrkA-C domain AV942_00085 PF02254 TrkA-N domain AV942_00090 PF01189 16S rRNA methyltransferase RsmB/F AV942_00090 PF01029 NusB family AV942_00095 PF00551 Formyl transferase AV942_00095 PF02911 Formyl transferase, C-terminal domain AV942_00100 PF01327 Polypeptide deformylase AV942_00110 PF02481 DNA recombination-mediator protein A AV942_00110 PF17782 DprA winged helix domain AV942_00115 PF04361 Protein of unknown function (DUF494) AV942_00125 PF01300 Telomere recombination AV942_00130 PF01218 Coproporphyrinogen III oxidase AV942_00135 PF03922 OmpW family AV942_00145 PF08501 Shikimate dehydrogenase substrate binding domain AV942_00145 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AV942_00145 PF01488 Shikimate / quinate 5-dehydrogenase AV942_00150 PF00132 Bacterial transferase hexapeptide (six repeats) AV942_00195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AV942_00195 PF14579 Helix-hairpin-helix motif AV942_00195 PF02811 PHP domain AV942_00195 PF07733 Bacterial DNA polymerase III alpha NTPase domain AV942_00195 PF01336 OB-fold nucleic acid binding domain AV942_00225 PF02225 PA domain AV942_00225 PF04389 Peptidase family M28 AV942_00230 PF00535 Glycosyl transferase family 2 AV942_00235 PF00440 Bacterial regulatory proteins, tetR family AV942_00240 PF04127 DNA / pantothenate metabolism flavoprotein AV942_00240 PF02441 Flavoprotein AV942_00245 PF04002 RadC-like JAB domain AV942_00265 PF06082 Exopolysaccharide biosynthesis protein YbjH AV942_00270 PF00830 Ribosomal L28 family AV942_00275 PF00471 Ribosomal protein L33 AV942_00285 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AV942_00285 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AV942_00285 PF06827 Zinc finger found in FPG and IleRS AV942_00290 PF01467 Cytidylyltransferase-like AV942_00300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AV942_00315 PF00563 EAL domain AV942_00315 PF00990 Diguanylate cyclase, GGDEF domain AV942_00315 PF03707 Bacterial signalling protein N terminal repeat AV942_00320 PF00155 Aminotransferase class I and II AV942_00325 PF00107 Zinc-binding dehydrogenase AV942_00325 PF08240 Alcohol dehydrogenase GroES-like domain AV942_00330 PF00581 Rhodanese-like domain AV942_00335 PF01694 Rhomboid family AV942_00335 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AV942_00345 PF04345 Chorismate lyase AV942_00350 PF01040 UbiA prenyltransferase family AV942_00365 PF04380 Membrane fusogenic activity AV942_00370 PF00580 UvrD/REP helicase N-terminal domain AV942_00370 PF13361 UvrD-like helicase C-terminal domain AV942_00375 PF00990 Diguanylate cyclase, GGDEF domain AV942_00375 PF03707 Bacterial signalling protein N terminal repeat AV942_00375 PF00563 EAL domain AV942_00380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AV942_00410 PF04143 Sulphur transport AV942_00415 PF02082 Transcriptional regulator AV942_00420 PF01925 Sulfite exporter TauE/SafE AV942_00425 PF00753 Metallo-beta-lactamase superfamily AV942_00435 PF07715 TonB-dependent Receptor Plug Domain AV942_00435 PF00593 TonB dependent receptor AV942_00450 PF00664 ABC transporter transmembrane region AV942_00450 PF00005 ABC transporter AV942_00455 PF00664 ABC transporter transmembrane region AV942_00455 PF00005 ABC transporter AV942_00465 PF01654 Cytochrome bd terminal oxidase subunit I AV942_00475 PF00581 Rhodanese-like domain AV942_00475 PF01206 Sulfurtransferase TusA AV942_00480 PF00753 Metallo-beta-lactamase superfamily AV942_00485 PF10417 C-terminal domain of 1-Cys peroxiredoxin AV942_00485 PF00578 AhpC/TSA family AV942_00495 PF00578 AhpC/TSA family AV942_00515 PF00873 AcrB/AcrD/AcrF family AV942_00525 PF02028 BCCT, betaine/carnitine/choline family transporter AV942_00570 PF00145 C-5 cytosine-specific DNA methylase AV942_00575 PF17757 UvrB interaction domain AV942_00575 PF12344 Ultra-violet resistance protein B AV942_00575 PF02151 UvrB/uvrC motif AV942_00575 PF04851 Type III restriction enzyme, res subunit AV942_00575 PF00271 Helicase conserved C-terminal domain AV942_00585 PF13533 Biotin-lipoyl like AV942_00590 PF00005 ABC transporter AV942_00600 PF00593 TonB dependent receptor AV942_00600 PF07715 TonB-dependent Receptor Plug Domain AV942_00610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV942_00610 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_00610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_00615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_00615 PF03466 LysR substrate binding domain AV942_00620 PF00753 Metallo-beta-lactamase superfamily AV942_00625 PF04317 YcjX-like family, DUF463 AV942_00640 PF02661 Fic/DOC family AV942_00645 PF06968 Biotin and Thiamin Synthesis associated domain AV942_00645 PF04055 Radical SAM superfamily AV942_00650 PF05690 Thiazole biosynthesis protein ThiG AV942_00660 PF00899 ThiF family AV942_00665 PF02581 Thiamine monophosphate synthase AV942_00670 PF13667 ThiC-associated domain AV942_00670 PF01964 Radical SAM ThiC family AV942_00675 PF07219 HemY protein N-terminus AV942_00675 PF07719 Tetratricopeptide repeat AV942_00680 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AV942_00685 PF02602 Uroporphyrinogen-III synthase HemD AV942_00690 PF03900 Porphobilinogen deaminase, C-terminal domain AV942_00690 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AV942_00695 PF00990 Diguanylate cyclase, GGDEF domain AV942_00695 PF17151 Periplasmic sensor domain AV942_00705 PF00625 Guanylate kinase AV942_00710 PF01192 RNA polymerase Rpb6 AV942_00715 PF02824 TGS domain AV942_00715 PF04607 Region found in RelA / SpoT proteins AV942_00715 PF13291 ACT domain AV942_00720 PF01042 Endoribonuclease L-PSP AV942_00725 PF00588 SpoU rRNA Methylase family AV942_00725 PF12105 SpoU, rRNA methylase, C-terminal AV942_00730 PF00271 Helicase conserved C-terminal domain AV942_00730 PF17191 RecG wedge domain AV942_00730 PF00270 DEAD/DEAH box helicase AV942_00735 PF04445 Putative SAM-dependent methyltransferase AV942_00740 PF08534 Redoxin AV942_00755 PF00528 Binding-protein-dependent transport system inner membrane component AV942_00760 PF00005 ABC transporter AV942_00760 PF08402 TOBE domain AV942_00765 PF00924 Mechanosensitive ion channel AV942_00765 PF05552 Conserved TM helix AV942_00790 PF01527 Transposase AV942_00800 PF00873 AcrB/AcrD/AcrF family AV942_00805 PF00529 HlyD membrane-fusion protein of T1SS AV942_00805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV942_00825 PF13411 MerR HTH family regulatory protein AV942_00830 PF01527 Transposase AV942_00835 PF13276 HTH-like domain AV942_00835 PF00665 Integrase core domain AV942_00835 PF13333 Integrase core domain AV942_00850 PF04940 Sensors of blue-light using FAD AV942_00850 PF00563 EAL domain AV942_00855 PF03466 LysR substrate binding domain AV942_00855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_00860 PF01810 LysE type translocator AV942_00865 PF00893 Small Multidrug Resistance protein AV942_00880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV942_00880 PF00529 HlyD membrane-fusion protein of T1SS AV942_00885 PF00873 AcrB/AcrD/AcrF family AV942_00895 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AV942_00895 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AV942_00900 PF00850 Histone deacetylase domain AV942_00915 PF00672 HAMP domain AV942_00915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_00915 PF12729 Four helix bundle sensory module for signal transduction AV942_00925 PF11737 Protein of unknown function (DUF3300) AV942_00930 PF00925 GTP cyclohydrolase II AV942_00935 PF00990 Diguanylate cyclase, GGDEF domain AV942_00935 PF08448 PAS fold AV942_00935 PF00563 EAL domain AV942_00950 PF16124 RecQ zinc-binding AV942_00950 PF00270 DEAD/DEAH box helicase AV942_00950 PF00271 Helicase conserved C-terminal domain AV942_00950 PF00570 HRDC domain AV942_00950 PF09382 RQC domain AV942_00955 PF01769 Divalent cation transporter AV942_00955 PF03448 MgtE intracellular N domain AV942_00955 PF00571 CBS domain AV942_00960 PF00892 EamA-like transporter family AV942_00965 PF00990 Diguanylate cyclase, GGDEF domain AV942_00965 PF00072 Response regulator receiver domain AV942_00970 PF00580 UvrD/REP helicase N-terminal domain AV942_00970 PF13361 UvrD-like helicase C-terminal domain AV942_00975 PF06426 Serine acetyltransferase, N-terminal AV942_00975 PF00132 Bacterial transferase hexapeptide (six repeats) AV942_00980 PF13419 Haloacid dehalogenase-like hydrolase AV942_00995 PF01678 Diaminopimelate epimerase AV942_01000 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AV942_01000 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AV942_01015 PF01569 PAP2 superfamily AV942_01020 PF03737 Aldolase/RraA AV942_01030 PF02441 Flavoprotein AV942_01035 PF02875 Mur ligase family, glutamate ligase domain AV942_01035 PF01225 Mur ligase family, catalytic domain AV942_01035 PF08245 Mur ligase middle domain AV942_01040 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AV942_01045 PF00719 Inorganic pyrophosphatase AV942_01070 PF17755 UvrA DNA-binding domain AV942_01070 PF17760 UvrA interaction domain AV942_01070 PF00005 ABC transporter AV942_01075 PF07690 Major Facilitator Superfamily AV942_01080 PF13419 Haloacid dehalogenase-like hydrolase AV942_01095 PF00356 Bacterial regulatory proteins, lacI family AV942_01105 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AV942_01105 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AV942_01110 PF00288 GHMP kinases N terminal domain AV942_01110 PF08544 GHMP kinases C terminal AV942_01110 PF10509 Galactokinase galactose-binding signature AV942_01115 PF00474 Sodium:solute symporter family AV942_01120 PF00436 Single-strand binding protein family AV942_01135 PF16363 GDP-mannose 4,6 dehydratase AV942_01140 PF16355 Domain of unknown function (DUF4982) AV942_01140 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AV942_01140 PF00703 Glycosyl hydrolases family 2 AV942_01140 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AV942_01140 PF02837 Glycosyl hydrolases family 2, sugar binding domain AV942_01155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AV942_01155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AV942_01160 PF00455 DeoR C terminal sensor domain AV942_01160 PF08220 DeoR-like helix-turn-helix domain AV942_01165 PF01266 FAD dependent oxidoreductase AV942_01165 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AV942_01200 PF00263 Bacterial type II and III secretion system protein AV942_01200 PF03958 Bacterial type II/III secretion system short domain AV942_01205 PF01471 Putative peptidoglycan binding domain AV942_01205 PF13401 AAA domain AV942_01215 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AV942_01215 PF00437 Type II/IV secretion system protein AV942_01220 PF00482 Type II secretion system (T2SS), protein F AV942_01230 PF07963 Prokaryotic N-terminal methylation motif AV942_01230 PF00114 Pilin (bacterial filament) AV942_01235 PF00114 Pilin (bacterial filament) AV942_01235 PF07963 Prokaryotic N-terminal methylation motif AV942_01240 PF07963 Prokaryotic N-terminal methylation motif AV942_01240 PF00114 Pilin (bacterial filament) AV942_01270 PF04085 rod shape-determining protein MreC AV942_01275 PF04093 rod shape-determining protein MreD AV942_01280 PF02545 Maf-like protein AV942_01285 PF10150 Ribonuclease E/G family AV942_01285 PF00575 S1 RNA binding domain AV942_01295 PF00795 Carbon-nitrogen hydrolase AV942_01300 PF01523 Putative modulator of DNA gyrase AV942_01305 PF04751 Protein of unknown function (DUF615) AV942_01310 PF01523 Putative modulator of DNA gyrase AV942_01315 PF02837 Glycosyl hydrolases family 2, sugar binding domain AV942_01315 PF00703 Glycosyl hydrolases family 2 AV942_01315 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AV942_01315 PF16353 Domain of unknown function(DUF4981) AV942_01315 PF02929 Beta galactosidase small chain AV942_01320 PF00486 Transcriptional regulatory protein, C terminal AV942_01320 PF00072 Response regulator receiver domain AV942_01325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_01325 PF00512 His Kinase A (phospho-acceptor) domain AV942_01325 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV942_01330 PF08323 Starch synthase catalytic domain AV942_01330 PF00534 Glycosyl transferases group 1 AV942_01335 PF05175 Methyltransferase small domain AV942_01335 PF08468 Methyltransferase small domain N-terminal AV942_01340 PF02390 Putative methyltransferase AV942_01345 PF00561 alpha/beta hydrolase fold AV942_01350 PF00730 HhH-GPD superfamily base excision DNA repair protein AV942_01350 PF00633 Helix-hairpin-helix motif AV942_01350 PF14815 NUDIX domain AV942_01355 PF04362 Bacterial Fe(2+) trafficking AV942_01370 PF00512 His Kinase A (phospho-acceptor) domain AV942_01370 PF00672 HAMP domain AV942_01370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_01375 PF00072 Response regulator receiver domain AV942_01375 PF00486 Transcriptional regulatory protein, C terminal AV942_01390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV942_01395 PF00873 AcrB/AcrD/AcrF family AV942_01440 PF08031 Berberine and berberine like AV942_01440 PF01565 FAD binding domain AV942_01465 PF00175 Oxidoreductase NAD-binding domain AV942_01465 PF00042 Globin AV942_01465 PF00970 Oxidoreductase FAD-binding domain AV942_01485 PF01750 Hydrogenase maturation protease AV942_01495 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AV942_01495 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AV942_01500 PF00374 Nickel-dependent hydrogenase AV942_01510 PF01455 HupF/HypC family AV942_01515 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AV942_01520 PF02492 CobW/HypB/UreG, nucleotide-binding domain AV942_01525 PF01924 Hydrogenase formation hypA family AV942_01530 PF00708 Acylphosphatase AV942_01530 PF07503 HypF finger AV942_01530 PF17788 HypF Kae1-like domain AV942_01530 PF01300 Telomere recombination AV942_01535 PF00586 AIR synthase related protein, N-terminal domain AV942_01535 PF02769 AIR synthase related protein, C-terminal domain AV942_01540 PF09278 MerR, DNA binding AV942_01540 PF00376 MerR family regulatory protein AV942_01545 PF00403 Heavy-metal-associated domain AV942_01610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV942_01610 PF00529 HlyD membrane-fusion protein of T1SS AV942_01615 PF00873 AcrB/AcrD/AcrF family AV942_01620 PF16916 Dimerisation domain of Zinc Transporter AV942_01620 PF01545 Cation efflux family AV942_01630 PF01219 Prokaryotic diacylglycerol kinase AV942_01635 PF00884 Sulfatase AV942_01635 PF08019 Phosphoethanolamine transferase EptA/EptB AV942_01640 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AV942_01650 PF00535 Glycosyl transferase family 2 AV942_01655 PF00072 Response regulator receiver domain AV942_01655 PF00486 Transcriptional regulatory protein, C terminal AV942_01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_01660 PF00672 HAMP domain AV942_01660 PF00512 His Kinase A (phospho-acceptor) domain AV942_01695 PF00376 MerR family regulatory protein AV942_01695 PF09278 MerR, DNA binding AV942_01700 PF00403 Heavy-metal-associated domain AV942_01735 PF13520 Amino acid permease AV942_01745 PF07731 Multicopper oxidase AV942_01745 PF07732 Multicopper oxidase AV942_01745 PF00394 Multicopper oxidase AV942_01780 PF13276 HTH-like domain AV942_01780 PF00665 Integrase core domain AV942_01780 PF13333 Integrase core domain AV942_01785 PF13737 Transposase DDE domain AV942_01805 PF00356 Bacterial regulatory proteins, lacI family AV942_01805 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AV942_01815 PF01204 Trehalase AV942_01830 PF13419 Haloacid dehalogenase-like hydrolase AV942_01835 PF13426 PAS domain AV942_01835 PF08448 PAS fold AV942_01835 PF00072 Response regulator receiver domain AV942_01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_01835 PF00512 His Kinase A (phospho-acceptor) domain AV942_01850 PF00356 Bacterial regulatory proteins, lacI family AV942_01855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AV942_01855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AV942_01865 PF03825 Nucleoside H+ symporter AV942_01875 PF00732 GMC oxidoreductase AV942_01875 PF05199 GMC oxidoreductase AV942_01890 PF00465 Iron-containing alcohol dehydrogenase AV942_01920 PF01063 Amino-transferase class IV AV942_01925 PF00300 Histidine phosphatase superfamily (branch 1) AV942_01935 PF00694 Aconitase C-terminal domain AV942_01935 PF00330 Aconitase family (aconitate hydratase) AV942_01945 PF00437 Type II/IV secretion system protein AV942_01950 PF00338 Ribosomal protein S10p/S20e AV942_01955 PF00297 Ribosomal protein L3 AV942_01960 PF00573 Ribosomal protein L4/L1 family AV942_01965 PF00276 Ribosomal protein L23 AV942_01970 PF03947 Ribosomal Proteins L2, C-terminal domain AV942_01970 PF00181 Ribosomal Proteins L2, RNA binding domain AV942_01975 PF00203 Ribosomal protein S19 AV942_01980 PF00237 Ribosomal protein L22p/L17e AV942_01985 PF07650 KH domain AV942_01985 PF00189 Ribosomal protein S3, C-terminal domain AV942_01990 PF00252 Ribosomal protein L16p/L10e AV942_01995 PF00831 Ribosomal L29 protein AV942_02000 PF00366 Ribosomal protein S17 AV942_02005 PF13439 Glycosyltransferase Family 4 AV942_02005 PF00534 Glycosyl transferases group 1 AV942_02015 PF00534 Glycosyl transferases group 1 AV942_02015 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AV942_02035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_02035 PF02743 Cache domain AV942_02035 PF00672 HAMP domain AV942_02040 PF01432 Peptidase family M3 AV942_02050 PF01842 ACT domain AV942_02050 PF00551 Formyl transferase AV942_02060 PF04408 Helicase associated domain (HA2) AV942_02060 PF00271 Helicase conserved C-terminal domain AV942_02060 PF08482 ATP-dependent helicase C-terminal AV942_02060 PF00270 DEAD/DEAH box helicase AV942_02065 PF13406 Transglycosylase SLT domain AV942_02070 PF14814 Bifunctional transglycosylase second domain AV942_02070 PF00905 Penicillin binding protein transpeptidase domain AV942_02070 PF00912 Transglycosylase AV942_02080 PF05661 Protein of unknown function (DUF808) AV942_02085 PF12833 Helix-turn-helix domain AV942_02095 PF00543 Nitrogen regulatory protein P-II AV942_02100 PF00909 Ammonium Transporter Family AV942_02110 PF04261 Dyp-type peroxidase family AV942_02115 PF00672 HAMP domain AV942_02115 PF00211 Adenylate and Guanylate cyclase catalytic domain AV942_02120 PF00202 Aminotransferase class-III AV942_02125 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AV942_02125 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AV942_02140 PF00873 AcrB/AcrD/AcrF family AV942_02150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV942_02150 PF00672 HAMP domain AV942_02150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_02150 PF00512 His Kinase A (phospho-acceptor) domain AV942_02150 PF01627 Hpt domain AV942_02150 PF00072 Response regulator receiver domain AV942_02155 PF00521 DNA gyrase/topoisomerase IV, subunit A AV942_02155 PF03989 DNA gyrase C-terminal domain, beta-propeller AV942_02165 PF00990 Diguanylate cyclase, GGDEF domain AV942_02165 PF00563 EAL domain AV942_02165 PF13188 PAS domain AV942_02165 PF03707 Bacterial signalling protein N terminal repeat AV942_02175 PF00171 Aldehyde dehydrogenase family AV942_02180 PF04958 Arginine N-succinyltransferase beta subunit AV942_02185 PF00202 Aminotransferase class-III AV942_02195 PF00117 Glutamine amidotransferase class-I AV942_02200 PF00579 tRNA synthetases class I (W and Y) AV942_02205 PF00834 Ribulose-phosphate 3 epimerase family AV942_02225 PF02086 D12 class N6 adenine-specific DNA methyltransferase AV942_02235 PF01761 3-dehydroquinate synthase AV942_02240 PF01202 Shikimate kinase AV942_02245 PF11741 AMIN domain AV942_02245 PF03958 Bacterial type II/III secretion system short domain AV942_02245 PF00263 Bacterial type II and III secretion system protein AV942_02245 PF07660 Secretin and TonB N terminus short domain AV942_02270 PF17092 Penicillin-binding protein OB-like domain AV942_02270 PF00912 Transglycosylase AV942_02270 PF00905 Penicillin binding protein transpeptidase domain AV942_02275 PF03949 Malic enzyme, NAD binding domain AV942_02275 PF00390 Malic enzyme, N-terminal domain AV942_02285 PF02798 Glutathione S-transferase, N-terminal domain AV942_02295 PF06628 Catalase-related immune-responsive AV942_02295 PF00199 Catalase AV942_02310 PF00563 EAL domain AV942_02310 PF00990 Diguanylate cyclase, GGDEF domain AV942_02310 PF03707 Bacterial signalling protein N terminal repeat AV942_02315 PF00583 Acetyltransferase (GNAT) family AV942_02315 PF00696 Amino acid kinase family AV942_02320 PF14698 Argininosuccinate lyase C-terminal AV942_02320 PF00206 Lyase AV942_02325 PF00764 Arginosuccinate synthase AV942_02330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AV942_02330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AV942_02335 PF00696 Amino acid kinase family AV942_02340 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV942_02340 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV942_02345 PF02142 MGS-like domain AV942_02355 PF00486 Transcriptional regulatory protein, C terminal AV942_02355 PF00072 Response regulator receiver domain AV942_02360 PF16527 Two-component sensor protein CpxA, periplasmic domain AV942_02360 PF00672 HAMP domain AV942_02360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_02360 PF00512 His Kinase A (phospho-acceptor) domain AV942_02365 PF12146 Serine aminopeptidase, S33 AV942_02370 PF00588 SpoU rRNA Methylase family AV942_02380 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AV942_02380 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AV942_02385 PF02556 Preprotein translocase subunit SecB AV942_02390 PF00462 Glutaredoxin AV942_02395 PF00581 Rhodanese-like domain AV942_02400 PF01551 Peptidase family M23 AV942_02405 PF04748 Divergent polysaccharide deacetylase AV942_02425 PF02666 Phosphatidylserine decarboxylase AV942_02430 PF03193 RsgA GTPase AV942_02435 PF00929 Exonuclease AV942_02450 PF00593 TonB dependent receptor AV942_02450 PF07715 TonB-dependent Receptor Plug Domain AV942_02465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV942_02465 PF00205 Thiamine pyrophosphate enzyme, central domain AV942_02465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV942_02470 PF10369 Small subunit of acetolactate synthase AV942_02480 PF02416 mttA/Hcf106 family AV942_02485 PF02416 mttA/Hcf106 family AV942_02490 PF00902 Sec-independent protein translocase protein (TatC) AV942_02500 PF01026 TatD related DNase AV942_02505 PF01590 GAF domain AV942_02505 PF00360 Phytochrome region AV942_02505 PF00990 Diguanylate cyclase, GGDEF domain AV942_02505 PF00563 EAL domain AV942_02510 PF00490 Delta-aminolevulinic acid dehydratase AV942_02515 PF02541 Ppx/GppA phosphatase family AV942_02520 PF00270 DEAD/DEAH box helicase AV942_02520 PF00271 Helicase conserved C-terminal domain AV942_02525 PF00085 Thioredoxin AV942_02530 PF07498 Rho termination factor, N-terminal domain AV942_02530 PF07497 Rho termination factor, RNA-binding domain AV942_02530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV942_02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_02540 PF00072 Response regulator receiver domain AV942_02540 PF00512 His Kinase A (phospho-acceptor) domain AV942_02540 PF09308 LuxQ, periplasmic AV942_02545 PF06965 Na+/H+ antiporter 1 AV942_02550 PF00731 AIR carboxylase AV942_02555 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AV942_02555 PF02222 ATP-grasp domain AV942_02570 PF00210 Ferritin-like domain AV942_02575 PF07995 Glucose / Sorbosone dehydrogenase AV942_02580 PF07676 WD40-like Beta Propeller Repeat AV942_02580 PF00326 Prolyl oligopeptidase family AV942_02590 PF00085 Thioredoxin AV942_02605 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AV942_02610 PF00709 Adenylosuccinate synthetase AV942_02615 PF00171 Aldehyde dehydrogenase family AV942_02635 PF03553 Na+/H+ antiporter family AV942_02640 PF00933 Glycosyl hydrolase family 3 N terminal domain AV942_02650 PF07075 Protein of unknown function (DUF1343) AV942_02655 PF01380 SIS domain AV942_02660 PF01168 Alanine racemase, N-terminal domain AV942_02660 PF00842 Alanine racemase, C-terminal domain AV942_02665 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AV942_02675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV942_02700 PF08274 PhnA Zinc-Ribbon AV942_02700 PF03831 PhnA domain AV942_02705 PF00583 Acetyltransferase (GNAT) family AV942_02735 PF01381 Helix-turn-helix AV942_02740 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB AV942_02750 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AV942_02840 PF02803 Thiolase, C-terminal domain AV942_02840 PF00108 Thiolase, N-terminal domain AV942_02845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV942_02845 PF00378 Enoyl-CoA hydratase/isomerase AV942_02845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV942_02850 PF01464 Transglycosylase SLT domain AV942_02850 PF14718 Soluble lytic murein transglycosylase L domain AV942_02855 PF00557 Metallopeptidase family M24 AV942_02865 PF00348 Polyprenyl synthetase AV942_02870 PF00829 Ribosomal prokaryotic L21 protein AV942_02875 PF01016 Ribosomal L27 protein AV942_02880 PF01926 50S ribosome-binding GTPase AV942_02880 PF01018 GTP1/OBG AV942_02885 PF00186 Dihydrofolate reductase AV942_02890 PF00140 Sigma-70 factor, region 1.2 AV942_02890 PF04542 Sigma-70 region 2 AV942_02890 PF04539 Sigma-70 region 3 AV942_02890 PF04545 Sigma-70, region 4 AV942_02895 PF01551 Peptidase family M23 AV942_02895 PF01476 LysM domain AV942_02900 PF09335 SNARE associated Golgi protein AV942_02910 PF01142 tRNA pseudouridine synthase D (TruD) AV942_02915 PF02542 YgbB family AV942_02920 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AV942_02925 PF04977 Septum formation initiator AV942_02935 PF17200 Single Cache domain 2 AV942_02935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_02935 PF00672 HAMP domain AV942_02945 PF14850 DNA-binding domain of Proline dehydrogenase AV942_02945 PF01619 Proline dehydrogenase AV942_02945 PF00171 Aldehyde dehydrogenase family AV942_02945 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AV942_02965 PF02976 DNA mismatch repair enzyme MutH AV942_02970 PF00293 NUDIX domain AV942_02975 PF05524 PEP-utilising enzyme, N-terminal AV942_02975 PF01590 GAF domain AV942_02975 PF02896 PEP-utilising enzyme, TIM barrel domain AV942_02975 PF00391 PEP-utilising enzyme, mobile domain AV942_02980 PF01925 Sulfite exporter TauE/SafE AV942_02985 PF01790 Prolipoprotein diacylglyceryl transferase AV942_02990 PF00303 Thymidylate synthase AV942_02995 PF00072 Response regulator receiver domain AV942_03000 PF00072 Response regulator receiver domain AV942_03000 PF00990 Diguanylate cyclase, GGDEF domain AV942_03005 PF07690 Major Facilitator Superfamily AV942_03020 PF00849 RNA pseudouridylate synthase AV942_03025 PF18337 RapA N-terminal Tudor like domain AV942_03025 PF12137 RNA polymerase recycling family C-terminal AV942_03025 PF00271 Helicase conserved C-terminal domain AV942_03025 PF00176 SNF2 family N-terminal domain AV942_03025 PF18339 RapA N-terminal Tudor like domain 1 AV942_03035 PF02562 PhoH-like protein AV942_03035 PF13638 PIN domain AV942_03045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV942_03045 PF10414 Sirohaem synthase dimerisation region AV942_03050 PF03880 DbpA RNA binding domain AV942_03050 PF00270 DEAD/DEAH box helicase AV942_03050 PF00271 Helicase conserved C-terminal domain AV942_03065 PF02321 Outer membrane efflux protein AV942_03070 PF00293 NUDIX domain AV942_03080 PF00149 Calcineurin-like phosphoesterase AV942_03085 PF05728 Uncharacterised protein family (UPF0227) AV942_03090 PF01751 Toprim domain AV942_03090 PF00204 DNA gyrase B AV942_03090 PF00986 DNA gyrase B subunit, carboxyl terminus AV942_03090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_03100 PF13419 Haloacid dehalogenase-like hydrolase AV942_03125 PF04055 Radical SAM superfamily AV942_03135 PF00152 tRNA synthetases class II (D, K and N) AV942_03140 PF07715 TonB-dependent Receptor Plug Domain AV942_03140 PF00593 TonB dependent receptor AV942_03150 PF13302 Acetyltransferase (GNAT) domain AV942_03155 PF07660 Secretin and TonB N terminus short domain AV942_03155 PF07715 TonB-dependent Receptor Plug Domain AV942_03155 PF00593 TonB dependent receptor AV942_03165 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AV942_03170 PF05175 Methyltransferase small domain AV942_03180 PF01722 BolA-like protein AV942_03185 PF01569 PAP2 superfamily AV942_03195 PF08376 Nitrate and nitrite sensing AV942_03195 PF03861 ANTAR domain AV942_03210 PF01740 STAS domain AV942_03210 PF00916 Sulfate permease family AV942_03215 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AV942_03215 PF18267 Rubredoxin NAD+ reductase C-terminal domain AV942_03215 PF04324 BFD-like [2Fe-2S] binding domain AV942_03215 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AV942_03215 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_03225 PF04324 BFD-like [2Fe-2S] binding domain AV942_03225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AV942_03225 PF00384 Molybdopterin oxidoreductase AV942_03225 PF01568 Molydopterin dinucleotide binding domain AV942_03230 PF10414 Sirohaem synthase dimerisation region AV942_03230 PF14824 Sirohaem biosynthesis protein central AV942_03230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV942_03235 PF00591 Glycosyl transferase family, a/b domain AV942_03235 PF02885 Glycosyl transferase family, helical bundle domain AV942_03240 PF08447 PAS fold AV942_03240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_03240 PF13426 PAS domain AV942_03245 PF00005 ABC transporter AV942_03250 PF00528 Binding-protein-dependent transport system inner membrane component AV942_03255 PF00005 ABC transporter AV942_03270 PF01323 DSBA-like thioredoxin domain AV942_03275 PF07715 TonB-dependent Receptor Plug Domain AV942_03275 PF00593 TonB dependent receptor AV942_03280 PF01636 Phosphotransferase enzyme family AV942_03285 PF13746 4Fe-4S dicluster domain AV942_03285 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AV942_03285 PF12801 4Fe-4S binding domain AV942_03300 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_03300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV942_03300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_03300 PF12806 Acetyl-CoA dehydrogenase C-terminal like AV942_03315 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AV942_03315 PF13378 Enolase C-terminal domain-like AV942_03320 PF00596 Class II Aldolase and Adducin N-terminal domain AV942_03330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV942_03335 PF00873 AcrB/AcrD/AcrF family AV942_03350 PF00672 HAMP domain AV942_03350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_03350 PF02743 Cache domain AV942_03355 PF04545 Sigma-70, region 4 AV942_03355 PF04539 Sigma-70 region 3 AV942_03355 PF04542 Sigma-70 region 2 AV942_03355 PF00140 Sigma-70 factor, region 1.2 AV942_03355 PF04546 Sigma-70, non-essential region AV942_03355 PF03979 Sigma-70 factor, region 1.1 AV942_03360 PF01807 CHC2 zinc finger AV942_03360 PF10410 DnaB-helicase binding domain of primase AV942_03360 PF08278 DNA primase DnaG DnaB-binding AV942_03360 PF08275 DNA primase catalytic core, N-terminal domain AV942_03370 PF01165 Ribosomal protein S21 AV942_03375 PF00814 Glycoprotease family AV942_03385 PF02660 Glycerol-3-phosphate acyltransferase AV942_03390 PF02152 Dihydroneopterin aldolase AV942_03400 PF02673 Bacitracin resistance protein BacA AV942_03405 PF01230 HIT domain AV942_03420 PF03594 Benzoate membrane transport protein AV942_03425 PF01381 Helix-turn-helix AV942_03425 PF07883 Cupin domain AV942_03430 PF04381 Putative exonuclease, RdgC AV942_03435 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV942_03435 PF00512 His Kinase A (phospho-acceptor) domain AV942_03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_03440 PF00072 Response regulator receiver domain AV942_03440 PF00486 Transcriptional regulatory protein, C terminal AV942_03445 PF00989 PAS fold AV942_03445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_03445 PF11808 Phosphate regulon sensor protein PhoR AV942_03445 PF00512 His Kinase A (phospho-acceptor) domain AV942_03450 PF12849 PBP superfamily domain AV942_03470 PF01618 MotA/TolQ/ExbB proton channel family AV942_03475 PF01618 MotA/TolQ/ExbB proton channel family AV942_03480 PF02472 Biopolymer transport protein ExbD/TolR AV942_03485 PF03544 Gram-negative bacterial TonB protein C-terminal AV942_03495 PF00072 Response regulator receiver domain AV942_03500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_03500 PF00512 His Kinase A (phospho-acceptor) domain AV942_03500 PF01627 Hpt domain AV942_03500 PF00072 Response regulator receiver domain AV942_03500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV942_03500 PF00672 HAMP domain AV942_03505 PF13193 AMP-binding enzyme C-terminal domain AV942_03505 PF00501 AMP-binding enzyme AV942_03515 PF07995 Glucose / Sorbosone dehydrogenase AV942_03520 PF00330 Aconitase family (aconitate hydratase) AV942_03520 PF06434 Aconitate hydratase 2 N-terminus AV942_03520 PF11791 Aconitate B N-terminal domain AV942_03525 PF01048 Phosphorylase superfamily AV942_03540 PF00330 Aconitase family (aconitate hydratase) AV942_03540 PF06434 Aconitate hydratase 2 N-terminus AV942_03540 PF11791 Aconitate B N-terminal domain AV942_03550 PF01842 ACT domain AV942_03550 PF00696 Amino acid kinase family AV942_03555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_03555 PF00672 HAMP domain AV942_03560 PF00149 Calcineurin-like phosphoesterase AV942_03565 PF04379 ApaG domain AV942_03570 PF00398 Ribosomal RNA adenine dimethylase AV942_03575 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AV942_03580 PF09312 SurA N-terminal domain AV942_03580 PF00639 PPIC-type PPIASE domain AV942_03585 PF03968 OstA-like protein AV942_03585 PF04453 LPS transport system D AV942_03590 PF00226 DnaJ domain AV942_03590 PF05099 Tellurite resistance protein TerB AV942_03595 PF00589 Phage integrase family AV942_03595 PF02899 Phage integrase, N-terminal SAM-like domain AV942_03600 PF10411 Disulfide bond isomerase protein N-terminus AV942_03600 PF13098 Thioredoxin-like domain AV942_03605 PF17768 RecJ OB domain AV942_03605 PF01368 DHH family AV942_03605 PF02272 DHHA1 domain AV942_03615 PF11967 Recombination protein O N terminal AV942_03615 PF02565 Recombination protein O C terminal AV942_03620 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AV942_03625 PF01648 4'-phosphopantetheinyl transferase superfamily AV942_03630 PF05958 tRNA (Uracil-5-)-methyltransferase AV942_03635 PF13291 ACT domain AV942_03635 PF04607 Region found in RelA / SpoT proteins AV942_03635 PF02824 TGS domain AV942_03640 PF03819 MazG nucleotide pyrophosphohydrolase domain AV942_03675 PF00501 AMP-binding enzyme AV942_03675 PF13193 AMP-binding enzyme C-terminal domain AV942_03685 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AV942_03695 PF00535 Glycosyl transferase family 2 AV942_03715 PF08521 Two-component sensor kinase N-terminal AV942_03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_03715 PF00512 His Kinase A (phospho-acceptor) domain AV942_03720 PF00072 Response regulator receiver domain AV942_03720 PF00486 Transcriptional regulatory protein, C terminal AV942_03730 PF00572 Ribosomal protein L13 AV942_03735 PF00380 Ribosomal protein S9/S16 AV942_03740 PF00355 Rieske [2Fe-2S] domain AV942_03740 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AV942_03745 PF00033 Cytochrome b/b6/petB AV942_03745 PF00032 Cytochrome b(C-terminal)/b6/petD AV942_03750 PF02167 Cytochrome C1 family AV942_03755 PF00043 Glutathione S-transferase, C-terminal domain AV942_03755 PF02798 Glutathione S-transferase, N-terminal domain AV942_03760 PF04386 Stringent starvation protein B AV942_03765 PF01769 Divalent cation transporter AV942_03765 PF00571 CBS domain AV942_03765 PF03448 MgtE intracellular N domain AV942_03770 PF00381 PTS HPr component phosphorylation site AV942_03775 PF03668 P-loop ATPase protein family AV942_03780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AV942_03785 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AV942_03790 PF04552 Sigma-54, DNA binding domain AV942_03790 PF04963 Sigma-54 factor, core binding domain AV942_03790 PF00309 Sigma-54 factor, Activator interacting domain (AID) AV942_03795 PF00005 ABC transporter AV942_03795 PF12399 Branched-chain amino acid ATP-binding cassette transporter AV942_03800 PF03968 OstA-like protein AV942_03815 PF01380 SIS domain AV942_03815 PF00571 CBS domain AV942_03820 PF01699 Sodium/calcium exchanger protein AV942_03825 PF00005 ABC transporter AV942_03830 PF02405 Permease MlaE AV942_03835 PF02470 MlaD protein AV942_03840 PF05494 MlaC protein AV942_03850 PF01722 BolA-like protein AV942_03855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AV942_03860 PF13180 PDZ domain AV942_03865 PF00595 PDZ domain AV942_03865 PF13180 PDZ domain AV942_03875 PF03969 AFG1-like ATPase AV942_03880 PF01709 Transcriptional regulator AV942_03900 PF07549 SecD/SecF GG Motif AV942_03900 PF02355 Protein export membrane protein AV942_03900 PF02355 Protein export membrane protein AV942_03900 PF07549 SecD/SecF GG Motif AV942_03905 PF02080 TrkA-C domain AV942_03905 PF03471 Transporter associated domain AV942_03905 PF00999 Sodium/hydrogen exchanger family AV942_03915 PF07715 TonB-dependent Receptor Plug Domain AV942_03915 PF00593 TonB dependent receptor AV942_03920 PF00892 EamA-like transporter family AV942_03930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_03930 PF00512 His Kinase A (phospho-acceptor) domain AV942_03930 PF09308 LuxQ, periplasmic AV942_03930 PF00072 Response regulator receiver domain AV942_03935 PF13458 Periplasmic binding protein AV942_03950 PF02772 S-adenosylmethionine synthetase, central domain AV942_03950 PF02773 S-adenosylmethionine synthetase, C-terminal domain AV942_03950 PF00438 S-adenosylmethionine synthetase, N-terminal domain AV942_03955 PF02780 Transketolase, C-terminal domain AV942_03955 PF00456 Transketolase, thiamine diphosphate binding domain AV942_03955 PF02779 Transketolase, pyrimidine binding domain AV942_03960 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AV942_03960 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV942_03965 PF00162 Phosphoglycerate kinase AV942_03970 PF00274 Fructose-bisphosphate aldolase class-I AV942_03980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV942_03980 PF00529 HlyD membrane-fusion protein of T1SS AV942_03985 PF00873 AcrB/AcrD/AcrF family AV942_03990 PF02321 Outer membrane efflux protein AV942_03995 PF07676 WD40-like Beta Propeller Repeat AV942_03995 PF00326 Prolyl oligopeptidase family AV942_04000 PF02541 Ppx/GppA phosphatase family AV942_04005 PF17941 Polyphosphate kinase C-terminal domain 1 AV942_04005 PF02503 Polyphosphate kinase middle domain AV942_04005 PF13089 Polyphosphate kinase N-terminal domain AV942_04005 PF13090 Polyphosphate kinase C-terminal domain 2 AV942_04015 PF00528 Binding-protein-dependent transport system inner membrane component AV942_04020 PF00528 Binding-protein-dependent transport system inner membrane component AV942_04025 PF00005 ABC transporter AV942_04030 PF01895 PhoU domain AV942_04035 PF01384 Phosphate transporter family AV942_04045 PF03466 LysR substrate binding domain AV942_04045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_04055 PF03006 Haemolysin-III related AV942_04060 PF01047 MarR family AV942_04065 PF02566 OsmC-like protein AV942_04070 PF01433 Peptidase family M1 domain AV942_04085 PF01205 Uncharacterized protein family UPF0029 AV942_04085 PF09186 Domain of unknown function (DUF1949) AV942_04095 PF13426 PAS domain AV942_04095 PF08447 PAS fold AV942_04095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_04105 PF12320 Type 5 capsule protein repressor C-terminal domain AV942_04105 PF00149 Calcineurin-like phosphoesterase AV942_04110 PF13476 AAA domain AV942_04120 PF00375 Sodium:dicarboxylate symporter family AV942_04125 PF00491 Arginase family AV942_04130 PF01979 Amidohydrolase family AV942_04135 PF00392 Bacterial regulatory proteins, gntR family AV942_04135 PF07702 UTRA domain AV942_04145 PF00221 Aromatic amino acid lyase AV942_04170 PF00005 ABC transporter AV942_04170 PF12848 ABC transporter AV942_04190 PF00924 Mechanosensitive ion channel AV942_04250 PF00589 Phage integrase family AV942_04255 PF13817 IS66 C-terminal element AV942_04255 PF03050 Transposase IS66 family AV942_04255 PF13007 Transposase C of IS166 homeodomain AV942_04255 PF13005 zinc-finger binding domain of transposase IS66 AV942_04345 PF00665 Integrase core domain AV942_04350 PF01695 IstB-like ATP binding protein AV942_04360 PF02384 N-6 DNA Methylase AV942_04365 PF12161 HsdM N-terminal domain AV942_04365 PF02384 N-6 DNA Methylase AV942_04375 PF18766 SWI2/SNF2 ATPase AV942_04375 PF11867 Domain of unknown function (DUF3387) AV942_04375 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AV942_04390 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AV942_04425 PF04172 LrgB-like family AV942_04430 PF00072 Response regulator receiver domain AV942_04455 PF06969 HemN C-terminal domain AV942_04455 PF04055 Radical SAM superfamily AV942_04460 PF01725 Ham1 family AV942_04465 PF00271 Helicase conserved C-terminal domain AV942_04465 PF00270 DEAD/DEAH box helicase AV942_04470 PF01743 Poly A polymerase head domain AV942_04470 PF12627 Probable RNA and SrmB- binding site of polymerase A AV942_04475 PF13401 AAA domain AV942_04475 PF01471 Putative peptidoglycan binding domain AV942_04485 PF01966 HD domain AV942_04485 PF11871 Domain of unknown function (DUF3391) AV942_04490 PF00694 Aconitase C-terminal domain AV942_04495 PF00330 Aconitase family (aconitate hydratase) AV942_04500 PF00180 Isocitrate/isopropylmalate dehydrogenase AV942_04505 PF00682 HMGL-like AV942_04505 PF08502 LeuA allosteric (dimerisation) domain AV942_04515 PF03952 Enolase, N-terminal domain AV942_04515 PF00113 Enolase, C-terminal TIM barrel domain AV942_04520 PF00117 Glutamine amidotransferase class-I AV942_04520 PF06418 CTP synthase N-terminus AV942_04525 PF01624 MutS domain I AV942_04525 PF05192 MutS domain III AV942_04525 PF05188 MutS domain II AV942_04525 PF05190 MutS family domain IV AV942_04525 PF00488 MutS domain V AV942_04530 PF02464 Competence-damaged protein AV942_04535 PF00154 recA bacterial DNA recombination protein AV942_04540 PF00005 ABC transporter AV942_04545 PF12679 ABC-2 family transporter protein AV942_04560 PF00005 ABC transporter AV942_04565 PF03379 CcmB protein AV942_04570 PF01578 Cytochrome C assembly protein AV942_04575 PF04995 Heme exporter protein D (CcmD) AV942_04580 PF03100 CcmE AV942_04585 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AV942_04585 PF01578 Cytochrome C assembly protein AV942_04590 PF08534 Redoxin AV942_04595 PF03918 Cytochrome C biogenesis protein AV942_04605 PF04333 MlaA lipoprotein AV942_04610 PF16363 GDP-mannose 4,6 dehydratase AV942_04620 PF00854 POT family AV942_04630 PF00005 ABC transporter AV942_04650 PF00953 Glycosyl transferase family 4 AV942_04665 PF00483 Nucleotidyl transferase AV942_04670 PF10531 SLBB domain AV942_04675 PF00180 Isocitrate/isopropylmalate dehydrogenase AV942_04675 PF18324 Hypothetical protein TT1725 AV942_04690 PF03641 Possible lysine decarboxylase AV942_04690 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AV942_04690 PF11892 Domain of unknown function (DUF3412) AV942_04695 PF00072 Response regulator receiver domain AV942_04695 PF00990 Diguanylate cyclase, GGDEF domain AV942_04700 PF14489 QueF-like protein AV942_04700 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AV942_04705 PF07348 Syd protein (SUKH-2) AV942_04740 PF00849 RNA pseudouridylate synthase AV942_04745 PF00258 Flavodoxin AV942_04750 PF00132 Bacterial transferase hexapeptide (six repeats) AV942_04750 PF14602 Hexapeptide repeat of succinyl-transferase AV942_04750 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AV942_04755 PF01966 HD domain AV942_04755 PF08335 GlnD PII-uridylyltransferase AV942_04755 PF01909 Nucleotidyltransferase domain AV942_04760 PF00557 Metallopeptidase family M24 AV942_04765 PF00318 Ribosomal protein S2 AV942_04770 PF00889 Elongation factor TS AV942_04775 PF00696 Amino acid kinase family AV942_04780 PF01765 Ribosome recycling factor AV942_04785 PF01255 Putative undecaprenyl diphosphate synthase AV942_04795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AV942_04795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AV942_04795 PF13288 DXP reductoisomerase C-terminal domain AV942_04800 PF02163 Peptidase family M50 AV942_04800 PF17820 PDZ domain AV942_04805 PF07244 Surface antigen variable number repeat AV942_04805 PF01103 Surface antigen AV942_04810 PF03938 Outer membrane protein (OmpH-like) AV942_04815 PF07977 FabA-like domain AV942_04820 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AV942_04820 PF00132 Bacterial transferase hexapeptide (six repeats) AV942_04825 PF02684 Lipid-A-disaccharide synthetase AV942_04830 PF01351 Ribonuclease HII AV942_04835 PF01336 OB-fold nucleic acid binding domain AV942_04835 PF02811 PHP domain AV942_04835 PF14579 Helix-hairpin-helix motif AV942_04835 PF07733 Bacterial DNA polymerase III alpha NTPase domain AV942_04835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AV942_04840 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AV942_04845 PF01171 PP-loop family AV942_04845 PF09179 TilS substrate binding domain AV942_04845 PF11734 TilS substrate C-terminal domain AV942_04850 PF03707 Bacterial signalling protein N terminal repeat AV942_04850 PF00563 EAL domain AV942_04850 PF00990 Diguanylate cyclase, GGDEF domain AV942_04855 PF00999 Sodium/hydrogen exchanger family AV942_04855 PF02080 TrkA-C domain AV942_04855 PF02254 TrkA-N domain AV942_04865 PF14437 MafB19-like deaminase AV942_04870 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV942_04870 PF01464 Transglycosylase SLT domain AV942_04875 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AV942_04875 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AV942_04875 PF02769 AIR synthase related protein, C-terminal domain AV942_04880 PF01713 Smr domain AV942_04910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV942_04910 PF00529 HlyD membrane-fusion protein of T1SS AV942_04915 PF00196 Bacterial regulatory proteins, luxR family AV942_04915 PF00072 Response regulator receiver domain AV942_04950 PF00072 Response regulator receiver domain AV942_04950 PF01584 CheW-like domain AV942_04955 PF01739 CheR methyltransferase, SAM binding domain AV942_04955 PF03705 CheR methyltransferase, all-alpha domain AV942_04960 PF00460 Flagella basal body rod protein AV942_04965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV942_04965 PF00460 Flagella basal body rod protein AV942_04970 PF13861 FlgD Tudor-like domain AV942_04970 PF03963 Flagellar hook capping protein - N-terminal region AV942_04970 PF13860 FlgD Ig-like domain AV942_04975 PF07559 Flagellar basal body protein FlaE AV942_04975 PF00460 Flagella basal body rod protein AV942_04975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV942_04980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV942_04980 PF00460 Flagella basal body rod protein AV942_04985 PF00460 Flagella basal body rod protein AV942_04985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AV942_04990 PF02107 Flagellar L-ring protein AV942_04995 PF02119 Flagellar P-ring protein AV942_05000 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AV942_05000 PF10135 Rod binding protein AV942_05025 PF00700 Bacterial flagellin C-terminal helical region AV942_05025 PF00669 Bacterial flagellin N-terminal helical region AV942_05030 PF07196 Flagellin hook IN motif AV942_05030 PF00700 Bacterial flagellin C-terminal helical region AV942_05030 PF00669 Bacterial flagellin N-terminal helical region AV942_05040 PF07196 Flagellin hook IN motif AV942_05040 PF07195 Flagellar hook-associated protein 2 C-terminus AV942_05040 PF02465 Flagellar hook-associated protein 2 N-terminus AV942_05045 PF02561 Flagellar protein FliS AV942_05060 PF02719 Polysaccharide biosynthesis protein AV942_05065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AV942_05075 PF08666 SAF domain AV942_05075 PF03102 NeuB family AV942_05095 PF13193 AMP-binding enzyme C-terminal domain AV942_05095 PF00501 AMP-binding enzyme AV942_05130 PF00535 Glycosyl transferase family 2 AV942_05140 PF03668 P-loop ATPase protein family AV942_05145 PF00535 Glycosyl transferase family 2 AV942_05150 PF03275 UDP-galactopyranose mutase AV942_05155 PF00535 Glycosyl transferase family 2 AV942_05160 PF02348 Cytidylyltransferase AV942_05165 PF00669 Bacterial flagellin N-terminal helical region AV942_05165 PF00700 Bacterial flagellin C-terminal helical region AV942_05170 PF00158 Sigma-54 interaction domain AV942_05170 PF00072 Response regulator receiver domain AV942_05170 PF02954 Bacterial regulatory protein, Fis family AV942_05175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_05175 PF00989 PAS fold AV942_05175 PF00512 His Kinase A (phospho-acceptor) domain AV942_05180 PF02954 Bacterial regulatory protein, Fis family AV942_05180 PF00158 Sigma-54 interaction domain AV942_05185 PF02049 Flagellar hook-basal body complex protein FliE AV942_05190 PF08345 Flagellar M-ring protein C-terminal AV942_05190 PF01514 Secretory protein of YscJ/FliF family AV942_05195 PF14842 FliG N-terminal domain AV942_05195 PF01706 FliG C-terminal domain AV942_05195 PF14841 FliG middle domain AV942_05205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV942_05205 PF18269 T3SS EscN ATPase C-terminal domain AV942_05225 PF02154 Flagellar motor switch protein FliM AV942_05225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV942_05230 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AV942_05235 PF04347 Flagellar biosynthesis protein, FliO AV942_05240 PF00813 FliP family AV942_05245 PF01313 Bacterial export proteins, family 3 AV942_05250 PF01311 Bacterial export proteins, family 1 AV942_05255 PF01312 FlhB HrpN YscU SpaS Family AV942_05260 PF00771 FHIPEP family AV942_05265 PF00448 SRP54-type protein, GTPase domain AV942_05270 PF10609 NUBPL iron-transfer P-loop NTPase AV942_05275 PF04542 Sigma-70 region 2 AV942_05275 PF04539 Sigma-70 region 3 AV942_05275 PF04545 Sigma-70, region 4 AV942_05280 PF00072 Response regulator receiver domain AV942_05285 PF04344 Chemotaxis phosphatase, CheZ AV942_05290 PF01627 Hpt domain AV942_05290 PF01584 CheW-like domain AV942_05290 PF02895 Signal transducing histidine kinase, homodimeric domain AV942_05290 PF07194 P2 response regulator binding domain AV942_05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_05295 PF01339 CheB methylesterase AV942_05295 PF00072 Response regulator receiver domain AV942_05300 PF13614 AAA domain AV942_05310 PF01584 CheW-like domain AV942_05320 PF04204 Homoserine O-succinyltransferase AV942_05325 PF02310 B12 binding domain AV942_05325 PF02574 Homocysteine S-methyltransferase AV942_05325 PF00809 Pterin binding enzyme AV942_05325 PF02965 Vitamin B12 dependent methionine synthase, activation domain AV942_05325 PF02607 B12 binding domain AV942_05330 PF02965 Vitamin B12 dependent methionine synthase, activation domain AV942_05330 PF00809 Pterin binding enzyme AV942_05330 PF02574 Homocysteine S-methyltransferase AV942_05330 PF02607 B12 binding domain AV942_05330 PF02310 B12 binding domain AV942_05340 PF06865 Pyrimidine/purine nucleoside phosphorylase AV942_05345 PF03466 LysR substrate binding domain AV942_05345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_05350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_05350 PF03466 LysR substrate binding domain AV942_05355 PF00484 Carbonic anhydrase AV942_05360 PF00916 Sulfate permease family AV942_05360 PF01740 STAS domain AV942_05370 PF13977 BetI-type transcriptional repressor, C-terminal AV942_05370 PF00440 Bacterial regulatory proteins, tetR family AV942_05375 PF01431 Peptidase family M13 AV942_05375 PF05649 Peptidase family M13 AV942_05385 PF02631 RecX family AV942_05390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV942_05390 PF01411 tRNA synthetases class II (A) AV942_05390 PF02272 DHHA1 domain AV942_05395 PF02599 Global regulator protein family AV942_05420 PF02436 Conserved carboxylase domain AV942_05420 PF00364 Biotin-requiring enzyme AV942_05420 PF00682 HMGL-like AV942_05425 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AV942_05430 PF00005 ABC transporter AV942_05435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AV942_05435 PF00005 ABC transporter AV942_05440 PF00528 Binding-protein-dependent transport system inner membrane component AV942_05440 PF12911 N-terminal TM domain of oligopeptide transport permease C AV942_05445 PF00528 Binding-protein-dependent transport system inner membrane component AV942_05450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AV942_05455 PF02954 Bacterial regulatory protein, Fis family AV942_05455 PF00158 Sigma-54 interaction domain AV942_05460 PF04012 PspA/IM30 family AV942_05475 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AV942_05480 PF00158 Sigma-54 interaction domain AV942_05480 PF18024 Helix-turn-helix domain AV942_05490 PF14497 Glutathione S-transferase, C-terminal domain AV942_05490 PF02798 Glutathione S-transferase, N-terminal domain AV942_05495 PF01037 Lrp/AsnC ligand binding domain AV942_05500 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV942_05500 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AV942_05515 PF03301 Tryptophan 2,3-dioxygenase AV942_05525 PF07715 TonB-dependent Receptor Plug Domain AV942_05525 PF00593 TonB dependent receptor AV942_05560 PF01618 MotA/TolQ/ExbB proton channel family AV942_05565 PF01618 MotA/TolQ/ExbB proton channel family AV942_05570 PF02472 Biopolymer transport protein ExbD/TolR AV942_05575 PF03544 Gram-negative bacterial TonB protein C-terminal AV942_05585 PF17176 tRNA-binding domain AV942_05585 PF05127 Helicase AV942_05585 PF08351 Domain of unknown function (DUF1726) AV942_05585 PF13718 GNAT acetyltransferase 2 AV942_05610 PF01636 Phosphotransferase enzyme family AV942_05625 PF00583 Acetyltransferase (GNAT) family AV942_05640 PF03466 LysR substrate binding domain AV942_05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_05645 PF07690 Major Facilitator Superfamily AV942_05650 PF00296 Luciferase-like monooxygenase AV942_05655 PF00248 Aldo/keto reductase family AV942_05670 PF13533 Biotin-lipoyl like AV942_05675 PF01047 MarR family AV942_05685 PF01381 Helix-turn-helix AV942_05690 PF13657 HipA N-terminal domain AV942_05690 PF07804 HipA-like C-terminal domain AV942_05720 PF01699 Sodium/calcium exchanger protein AV942_05725 PF05552 Conserved TM helix AV942_05725 PF00924 Mechanosensitive ion channel AV942_05730 PF13438 Domain of unknown function (DUF4113) AV942_05730 PF11799 impB/mucB/samB family C-terminal domain AV942_05730 PF00817 impB/mucB/samB family AV942_05735 PF00717 Peptidase S24-like AV942_05740 PF00929 Exonuclease AV942_05740 PF11490 DNA polymerase III polC-type N-terminus II AV942_05740 PF07733 Bacterial DNA polymerase III alpha NTPase domain AV942_05740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AV942_05740 PF02811 PHP domain AV942_05740 PF14579 Helix-hairpin-helix motif AV942_05755 PF02384 N-6 DNA Methylase AV942_05760 PF01420 Type I restriction modification DNA specificity domain AV942_05830 PF00403 Heavy-metal-associated domain AV942_05835 PF09278 MerR, DNA binding AV942_05835 PF00376 MerR family regulatory protein AV942_05850 PF09278 MerR, DNA binding AV942_05850 PF00376 MerR family regulatory protein AV942_05855 PF01022 Bacterial regulatory protein, arsR family AV942_05865 PF01545 Cation efflux family AV942_05875 PF00403 Heavy-metal-associated domain AV942_05885 PF00873 AcrB/AcrD/AcrF family AV942_05890 PF02321 Outer membrane efflux protein AV942_05895 PF00873 AcrB/AcrD/AcrF family AV942_05900 PF00873 AcrB/AcrD/AcrF family AV942_05915 PF10411 Disulfide bond isomerase protein N-terminus AV942_05915 PF13098 Thioredoxin-like domain AV942_05930 PF10502 Signal peptidase, peptidase S26 AV942_05940 PF06834 TraU protein AV942_05945 PF06986 Type-1V conjugative transfer system mating pair stabilisation AV942_05950 PF00580 UvrD/REP helicase N-terminal domain AV942_05950 PF13361 UvrD-like helicase C-terminal domain AV942_05960 PF00082 Subtilase family AV942_05965 PF00004 ATPase family associated with various cellular activities (AAA) AV942_05985 PF00436 Single-strand binding protein family AV942_06000 PF07728 AAA domain (dynein-related subfamily) AV942_06000 PF08406 CbbQ/NirQ/NorQ C-terminal AV942_06020 PF00092 von Willebrand factor type A domain AV942_06025 PF04002 RadC-like JAB domain AV942_06045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_06045 PF03466 LysR substrate binding domain AV942_06060 PF06122 Conjugative relaxosome accessory transposon protein AV942_06105 PF01381 Helix-turn-helix AV942_06105 PF00717 Peptidase S24-like AV942_06110 PF16658 Class II release factor RF3, C-terminal domain AV942_06110 PF03144 Elongation factor Tu domain 2 AV942_06110 PF00009 Elongation factor Tu GTP binding domain AV942_06115 PF03485 Arginyl tRNA synthetase N terminal domain AV942_06115 PF00750 tRNA synthetases class I (R) AV942_06115 PF05746 DALR anticodon binding domain AV942_06135 PF00291 Pyridoxal-phosphate dependent enzyme AV942_06145 PF17158 Membrane-associated sensor, integral membrane domain AV942_06145 PF00990 Diguanylate cyclase, GGDEF domain AV942_06150 PF04224 Protein of unknown function, DUF417 AV942_06165 PF00487 Fatty acid desaturase AV942_06170 PF00970 Oxidoreductase FAD-binding domain AV942_06170 PF00175 Oxidoreductase NAD-binding domain AV942_06170 PF00042 Globin AV942_06180 PF00472 RF-1 domain AV942_06180 PF03462 PCRF domain AV942_06185 PF01336 OB-fold nucleic acid binding domain AV942_06185 PF00152 tRNA synthetases class II (D, K and N) AV942_06190 PF02558 Ketopantoate reductase PanE/ApbA AV942_06190 PF08546 Ketopantoate reductase PanE/ApbA C terminal AV942_06195 PF00849 RNA pseudouridylate synthase AV942_06205 PF00675 Insulinase (Peptidase family M16) AV942_06205 PF05193 Peptidase M16 inactive domain AV942_06210 PF04262 Glutamate-cysteine ligase AV942_06230 PF01713 Smr domain AV942_06235 PF05175 Methyltransferase small domain AV942_06240 PF01264 Chorismate synthase AV942_06250 PF04293 SpoVR like protein AV942_06255 PF04285 Protein of unknown function (DUF444) AV942_06260 PF06798 PrkA serine protein kinase C-terminal domain AV942_06260 PF08298 PrkA AAA domain AV942_06270 PF00462 Glutaredoxin AV942_06275 PF07715 TonB-dependent Receptor Plug Domain AV942_06275 PF00593 TonB dependent receptor AV942_06290 PF00593 TonB dependent receptor AV942_06290 PF07715 TonB-dependent Receptor Plug Domain AV942_06295 PF04324 BFD-like [2Fe-2S] binding domain AV942_06300 PF10417 C-terminal domain of 1-Cys peroxiredoxin AV942_06300 PF00578 AhpC/TSA family AV942_06305 PF00929 Exonuclease AV942_06310 PF00691 OmpA family AV942_06310 PF18393 MotY N-terminal domain AV942_06315 PF03009 Glycerophosphoryl diester phosphodiesterase family AV942_06320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV942_06325 PF00313 'Cold-shock' DNA-binding domain AV942_06335 PF04389 Peptidase family M28 AV942_06335 PF02225 PA domain AV942_06340 PF00730 HhH-GPD superfamily base excision DNA repair protein AV942_06340 PF00633 Helix-hairpin-helix motif AV942_06345 PF02508 Rnf-Nqr subunit, membrane protein AV942_06350 PF04205 FMN-binding domain AV942_06355 PF03116 NQR2, RnfD, RnfE family AV942_06360 PF10531 SLBB domain AV942_06360 PF12838 4Fe-4S dicluster domain AV942_06360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AV942_06360 PF13375 RnfC Barrel sandwich hybrid domain AV942_06365 PF04060 Putative Fe-S cluster AV942_06385 PF01554 MatE AV942_06390 PF17757 UvrB interaction domain AV942_06390 PF02151 UvrB/uvrC motif AV942_06390 PF12344 Ultra-violet resistance protein B AV942_06390 PF00271 Helicase conserved C-terminal domain AV942_06390 PF04851 Type III restriction enzyme, res subunit AV942_06400 PF06508 Queuosine biosynthesis protein QueC AV942_06405 PF04055 Radical SAM superfamily AV942_06415 PF00733 Asparagine synthase AV942_06415 PF13537 Glutamine amidotransferase domain AV942_06440 PF03600 Citrate transporter AV942_06440 PF02080 TrkA-C domain AV942_06445 PF00009 Elongation factor Tu GTP binding domain AV942_06450 PF00459 Inositol monophosphatase family AV942_06460 PF01507 Phosphoadenosine phosphosulfate reductase family AV942_06465 PF00474 Sodium:solute symporter family AV942_06470 PF00990 Diguanylate cyclase, GGDEF domain AV942_06470 PF17158 Membrane-associated sensor, integral membrane domain AV942_06480 PF04542 Sigma-70 region 2 AV942_06480 PF08281 Sigma-70, region 4 AV942_06495 PF07584 Aerotolerance regulator N-terminal AV942_06495 PF13519 von Willebrand factor type A domain AV942_06500 PF00092 von Willebrand factor type A domain AV942_06510 PF01882 Protein of unknown function DUF58 AV942_06515 PF07726 ATPase family associated with various cellular activities (AAA) AV942_06515 PF17863 AAA lid domain AV942_06520 PF00108 Thiolase, N-terminal domain AV942_06520 PF02803 Thiolase, C-terminal domain AV942_06525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV942_06525 PF00378 Enoyl-CoA hydratase/isomerase AV942_06525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV942_06535 PF00563 EAL domain AV942_06535 PF00990 Diguanylate cyclase, GGDEF domain AV942_06535 PF03707 Bacterial signalling protein N terminal repeat AV942_06540 PF05193 Peptidase M16 inactive domain AV942_06540 PF00675 Insulinase (Peptidase family M16) AV942_06545 PF00300 Histidine phosphatase superfamily (branch 1) AV942_06555 PF00571 CBS domain AV942_06555 PF01595 Cyclin M transmembrane N-terminal domain AV942_06555 PF03471 Transporter associated domain AV942_06560 PF01578 Cytochrome C assembly protein AV942_06565 PF00448 SRP54-type protein, GTPase domain AV942_06565 PF02881 SRP54-type protein, helical bundle domain AV942_06565 PF02978 Signal peptide binding domain AV942_06605 PF00873 AcrB/AcrD/AcrF family AV942_06610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV942_06615 PF00664 ABC transporter transmembrane region AV942_06615 PF00005 ABC transporter AV942_06630 PF00886 Ribosomal protein S16 AV942_06635 PF05239 PRC-barrel domain AV942_06635 PF01782 RimM N-terminal domain AV942_06640 PF01746 tRNA (Guanine-1)-methyltransferase AV942_06645 PF01245 Ribosomal protein L19 AV942_06650 PF03458 UPF0126 domain AV942_06655 PF00378 Enoyl-CoA hydratase/isomerase AV942_06660 PF00793 DAHP synthetase I family AV942_06665 PF02153 Prephenate dehydrogenase AV942_06665 PF01817 Chorismate mutase type II AV942_06670 PF00800 Prephenate dehydratase AV942_06670 PF01817 Chorismate mutase type II AV942_06675 PF00072 Response regulator receiver domain AV942_06680 PF01253 Translation initiation factor SUI1 AV942_06690 PF00072 Response regulator receiver domain AV942_06690 PF00486 Transcriptional regulatory protein, C terminal AV942_06700 PF03707 Bacterial signalling protein N terminal repeat AV942_06700 PF00563 EAL domain AV942_06700 PF00990 Diguanylate cyclase, GGDEF domain AV942_06710 PF00512 His Kinase A (phospho-acceptor) domain AV942_06710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_06720 PF00158 Sigma-54 interaction domain AV942_06720 PF00072 Response regulator receiver domain AV942_06725 PF00700 Bacterial flagellin C-terminal helical region AV942_06725 PF07196 Flagellin hook IN motif AV942_06725 PF00669 Bacterial flagellin N-terminal helical region AV942_06740 PF00152 tRNA synthetases class II (D, K and N) AV942_06740 PF01336 OB-fold nucleic acid binding domain AV942_06740 PF02938 GAD domain AV942_06745 PF00293 NUDIX domain AV942_06750 PF02075 Crossover junction endodeoxyribonuclease RuvC AV942_06760 PF17864 RuvB AAA lid domain AV942_06760 PF05491 RuvB C-terminal winged helix domain AV942_06760 PF05496 Holliday junction DNA helicase RuvB P-loop domain AV942_06765 PF03061 Thioesterase superfamily AV942_06770 PF01618 MotA/TolQ/ExbB proton channel family AV942_06775 PF02472 Biopolymer transport protein ExbD/TolR AV942_06785 PF07676 WD40-like Beta Propeller Repeat AV942_06785 PF04052 TolB amino-terminal domain AV942_06790 PF00691 OmpA family AV942_06795 PF13174 Tetratricopeptide repeat AV942_06795 PF16331 TolA binding protein trimerisation AV942_06815 PF02445 Quinolinate synthetase A protein AV942_06835 PF02796 Helix-turn-helix domain of resolvase AV942_06835 PF00239 Resolvase, N terminal domain AV942_06850 PF01734 Patatin-like phospholipase AV942_06855 PF08546 Ketopantoate reductase PanE/ApbA C terminal AV942_06855 PF02558 Ketopantoate reductase PanE/ApbA AV942_06865 PF00072 Response regulator receiver domain AV942_06865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_06865 PF09308 LuxQ, periplasmic AV942_06865 PF00512 His Kinase A (phospho-acceptor) domain AV942_06875 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV942_06875 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV942_06885 PF01292 Prokaryotic cytochrome b561 AV942_06890 PF00563 EAL domain AV942_06890 PF03707 Bacterial signalling protein N terminal repeat AV942_06890 PF00990 Diguanylate cyclase, GGDEF domain AV942_06905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_06905 PF03466 LysR substrate binding domain AV942_06910 PF01863 Protein of unknown function DUF45 AV942_06920 PF00873 AcrB/AcrD/AcrF family AV942_06930 PF00440 Bacterial regulatory proteins, tetR family AV942_06930 PF08361 MAATS-type transcriptional repressor, C-terminal region AV942_06935 PF07715 TonB-dependent Receptor Plug Domain AV942_06935 PF00593 TonB dependent receptor AV942_06945 PF00873 AcrB/AcrD/AcrF family AV942_06955 PF00990 Diguanylate cyclase, GGDEF domain AV942_06965 PF02470 MlaD protein AV942_06970 PF04403 Paraquat-inducible protein A AV942_06985 PF01336 OB-fold nucleic acid binding domain AV942_06985 PF00152 tRNA synthetases class II (D, K and N) AV942_06995 PF01699 Sodium/calcium exchanger protein AV942_07000 PF08443 RimK-like ATP-grasp domain AV942_07000 PF18030 RimK PreATP-grasp domain AV942_07020 PF00202 Aminotransferase class-III AV942_07025 PF04055 Radical SAM superfamily AV942_07025 PF06968 Biotin and Thiamin Synthesis associated domain AV942_07030 PF00155 Aminotransferase class I and II AV942_07045 PF03575 Peptidase family S51 AV942_07050 PF01451 Low molecular weight phosphotyrosine protein phosphatase AV942_07055 PF01032 FecCD transport family AV942_07060 PF00005 ABC transporter AV942_07065 PF01474 Class-II DAHP synthetase family AV942_07080 PF00005 ABC transporter AV942_07080 PF00664 ABC transporter transmembrane region AV942_07085 PF06463 Molybdenum Cofactor Synthesis C AV942_07085 PF04055 Radical SAM superfamily AV942_07095 PF00072 Response regulator receiver domain AV942_07095 PF00486 Transcriptional regulatory protein, C terminal AV942_07120 PF00749 tRNA synthetases class I (E and Q), catalytic domain AV942_07160 PF01207 Dihydrouridine synthase (Dus) AV942_07175 PF13472 GDSL-like Lipase/Acylhydrolase family AV942_07180 PF00005 ABC transporter AV942_07190 PF01370 NAD dependent epimerase/dehydratase family AV942_07190 PF08338 Domain of unknown function (DUF1731) AV942_07195 PF02152 Dihydroneopterin aldolase AV942_07200 PF01594 AI-2E family transporter AV942_07205 PF08918 PhoQ Sensor AV942_07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_07210 PF00072 Response regulator receiver domain AV942_07210 PF00486 Transcriptional regulatory protein, C terminal AV942_07225 PF03795 YCII-related domain AV942_07230 PF00290 Tryptophan synthase alpha chain AV942_07235 PF00291 Pyridoxal-phosphate dependent enzyme AV942_07240 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AV942_07240 PF00218 Indole-3-glycerol phosphate synthase AV942_07245 PF00591 Glycosyl transferase family, a/b domain AV942_07245 PF02885 Glycosyl transferase family, helical bundle domain AV942_07250 PF00117 Glutamine amidotransferase class-I AV942_07255 PF04715 Anthranilate synthase component I, N terminal region AV942_07255 PF00425 chorismate binding enzyme AV942_07260 PF02811 PHP domain AV942_07265 PF01300 Telomere recombination AV942_07270 PF02616 Segregation and condensation protein ScpA AV942_07275 PF04079 Segregation and condensation complex subunit ScpB AV942_07280 PF01479 S4 domain AV942_07280 PF00849 RNA pseudouridylate synthase AV942_07285 PF00248 Aldo/keto reductase family AV942_07290 PF14602 Hexapeptide repeat of succinyl-transferase AV942_07290 PF12464 Maltose acetyltransferase AV942_07300 PF04286 Protein of unknown function (DUF445) AV942_07315 PF00005 ABC transporter AV942_07315 PF00664 ABC transporter transmembrane region AV942_07320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV942_07320 PF00529 HlyD membrane-fusion protein of T1SS AV942_07325 PF05724 Thiopurine S-methyltransferase (TPMT) AV942_07330 PF04355 SmpA / OmlA family AV942_07335 PF02463 RecF/RecN/SMC N terminal domain AV942_07340 PF00210 Ferritin-like domain AV942_07350 PF00465 Iron-containing alcohol dehydrogenase AV942_07365 PF00561 alpha/beta hydrolase fold AV942_07375 PF00593 TonB dependent receptor AV942_07375 PF07715 TonB-dependent Receptor Plug Domain AV942_07380 PF00196 Bacterial regulatory proteins, luxR family AV942_07380 PF00072 Response regulator receiver domain AV942_07385 PF00512 His Kinase A (phospho-acceptor) domain AV942_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_07385 PF00672 HAMP domain AV942_07385 PF01627 Hpt domain AV942_07385 PF00072 Response regulator receiver domain AV942_07390 PF01025 GrpE AV942_07395 PF00012 Hsp70 protein AV942_07400 PF00684 DnaJ central domain AV942_07400 PF01556 DnaJ C terminal domain AV942_07400 PF00226 DnaJ domain AV942_07405 PF01322 Cytochrome C' AV942_07410 PF00563 EAL domain AV942_07410 PF12792 CSS motif domain associated with EAL AV942_07415 PF13193 AMP-binding enzyme C-terminal domain AV942_07415 PF00501 AMP-binding enzyme AV942_07415 PF16177 Acetyl-coenzyme A synthetase N-terminus AV942_07425 PF01113 Dihydrodipicolinate reductase, N-terminus AV942_07425 PF05173 Dihydrodipicolinate reductase, C-terminus AV942_07430 PF00117 Glutamine amidotransferase class-I AV942_07430 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AV942_07435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV942_07435 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AV942_07435 PF02142 MGS-like domain AV942_07440 PF01272 Transcription elongation factor, GreA/GreB, C-term AV942_07440 PF03449 Transcription elongation factor, N-terminal AV942_07455 PF00011 Hsp20/alpha crystallin family AV942_07460 PF00871 Acetokinase family AV942_07465 PF07085 DRTGG domain AV942_07465 PF01515 Phosphate acetyl/butaryl transferase AV942_07480 PF00795 Carbon-nitrogen hydrolase AV942_07485 PF03471 Transporter associated domain AV942_07485 PF00571 CBS domain AV942_07490 PF02130 Uncharacterized protein family UPF0054 AV942_07495 PF02562 PhoH-like protein AV942_07500 PF04055 Radical SAM superfamily AV942_07500 PF00919 Uncharacterized protein family UPF0004 AV942_07500 PF01938 TRAM domain AV942_07505 PF01494 FAD binding domain AV942_07530 PF07715 TonB-dependent Receptor Plug Domain AV942_07530 PF00593 TonB dependent receptor AV942_07535 PF03061 Thioesterase superfamily AV942_07540 PF01613 Flavin reductase like domain AV942_07550 PF01235 Sodium:alanine symporter family AV942_07595 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AV942_07600 PF06071 Protein of unknown function (DUF933) AV942_07600 PF01926 50S ribosome-binding GTPase AV942_07605 PF01195 Peptidyl-tRNA hydrolase AV942_07610 PF14693 Ribosomal protein TL5, C-terminal domain AV942_07610 PF01386 Ribosomal L25p family AV942_07615 PF08240 Alcohol dehydrogenase GroES-like domain AV942_07615 PF00107 Zinc-binding dehydrogenase AV942_07630 PF14572 Phosphoribosyl synthetase-associated domain AV942_07630 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AV942_07640 PF00288 GHMP kinases N terminal domain AV942_07640 PF08544 GHMP kinases C terminal AV942_07645 PF03550 Outer membrane lipoprotein LolB AV942_07650 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AV942_07650 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AV942_07650 PF01488 Shikimate / quinate 5-dehydrogenase AV942_07655 PF00472 RF-1 domain AV942_07655 PF03462 PCRF domain AV942_07660 PF17827 PrmC N-terminal domain AV942_07660 PF13847 Methyltransferase domain AV942_07665 PF11849 Domain of unknown function (DUF3369) AV942_07670 PF04247 Invasion gene expression up-regulator, SirB AV942_07685 PF03466 LysR substrate binding domain AV942_07685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_07695 PF04241 Protein of unknown function (DUF423) AV942_07700 PF01728 FtsJ-like methyltransferase AV942_07700 PF18125 RlmM ferredoxin-like domain AV942_07705 PF14492 Elongation Factor G, domain II AV942_07705 PF00009 Elongation factor Tu GTP binding domain AV942_07705 PF03144 Elongation factor Tu domain 2 AV942_07705 PF00679 Elongation factor G C-terminus AV942_07705 PF03764 Elongation factor G, domain IV AV942_07715 PF02560 Cyanate lyase C-terminal domain AV942_07720 PF00069 Protein kinase domain AV942_07725 PF01226 Formate/nitrite transporter AV942_07730 PF01841 Transglutaminase-like superfamily AV942_07730 PF13559 Domain of unknown function (DUF4129) AV942_07730 PF11992 Domain of unknown function (DUF3488) AV942_07740 PF07726 ATPase family associated with various cellular activities (AAA) AV942_07740 PF17863 AAA lid domain AV942_07745 PF03925 SeqA protein C-terminal domain AV942_07745 PF17206 SeqA protein N-terminal domain AV942_07750 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV942_07750 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV942_07750 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV942_07750 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV942_07755 PF00343 Carbohydrate phosphorylase AV942_07760 PF00990 Diguanylate cyclase, GGDEF domain AV942_07760 PF03707 Bacterial signalling protein N terminal repeat AV942_07760 PF00563 EAL domain AV942_07765 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AV942_07775 PF01906 Putative heavy-metal-binding AV942_07780 PF00375 Sodium:dicarboxylate symporter family AV942_07795 PF07687 Peptidase dimerisation domain AV942_07795 PF01546 Peptidase family M20/M25/M40 AV942_07800 PF03960 ArsC family AV942_07805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AV942_07820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV942_07825 PF04209 homogentisate 1,2-dioxygenase AV942_07845 PF12327 FtsZ family, C-terminal domain AV942_07845 PF00091 Tubulin/FtsZ family, GTPase domain AV942_07855 PF03707 Bacterial signalling protein N terminal repeat AV942_07855 PF00990 Diguanylate cyclase, GGDEF domain AV942_07855 PF00563 EAL domain AV942_07860 PF00990 Diguanylate cyclase, GGDEF domain AV942_07860 PF00563 EAL domain AV942_07860 PF03707 Bacterial signalling protein N terminal repeat AV942_07865 PF00873 AcrB/AcrD/AcrF family AV942_07875 PF02254 TrkA-N domain AV942_07875 PF00999 Sodium/hydrogen exchanger family AV942_07880 PF02525 Flavodoxin-like fold AV942_07890 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV942_07895 PF00111 2Fe-2S iron-sulfur cluster binding domain AV942_07895 PF01799 [2Fe-2S] binding domain AV942_07900 PF01638 HxlR-like helix-turn-helix AV942_07905 PF08448 PAS fold AV942_07905 PF00563 EAL domain AV942_07905 PF13426 PAS domain AV942_07905 PF05231 MASE1 AV942_07905 PF00990 Diguanylate cyclase, GGDEF domain AV942_07905 PF08447 PAS fold AV942_07915 PF01979 Amidohydrolase family AV942_07920 PF00576 HIUase/Transthyretin family AV942_07935 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV942_07935 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AV942_07940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV942_07940 PF00111 2Fe-2S iron-sulfur cluster binding domain AV942_07940 PF01799 [2Fe-2S] binding domain AV942_07940 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AV942_07950 PF08362 YcdC-like protein, C-terminal region AV942_07950 PF00440 Bacterial regulatory proteins, tetR family AV942_07965 PF00860 Permease family AV942_07970 PF00962 Adenosine/AMP deaminase AV942_07980 PF00072 Response regulator receiver domain AV942_07985 PF00563 EAL domain AV942_07985 PF00990 Diguanylate cyclase, GGDEF domain AV942_07985 PF01590 GAF domain AV942_07985 PF00360 Phytochrome region AV942_07990 PF00990 Diguanylate cyclase, GGDEF domain AV942_07990 PF00563 EAL domain AV942_07990 PF00360 Phytochrome region AV942_07990 PF01590 GAF domain AV942_07995 PF00072 Response regulator receiver domain AV942_07995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_07995 PF00512 His Kinase A (phospho-acceptor) domain AV942_07995 PF09308 LuxQ, periplasmic AV942_08005 PF07715 TonB-dependent Receptor Plug Domain AV942_08005 PF00593 TonB dependent receptor AV942_08010 PF00860 Permease family AV942_08020 PF07687 Peptidase dimerisation domain AV942_08020 PF01546 Peptidase family M20/M25/M40 AV942_08025 PF00266 Aminotransferase class-V AV942_08030 PF01925 Sulfite exporter TauE/SafE AV942_08040 PF01425 Amidase AV942_08080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AV942_08080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV942_08080 PF02824 TGS domain AV942_08080 PF03129 Anticodon binding domain AV942_08085 PF00707 Translation initiation factor IF-3, C-terminal domain AV942_08085 PF05198 Translation initiation factor IF-3, N-terminal domain AV942_08090 PF01632 Ribosomal protein L35 AV942_08095 PF00453 Ribosomal protein L20 AV942_08100 PF00483 Nucleotidyl transferase AV942_08100 PF01050 Mannose-6-phosphate isomerase AV942_08105 PF02397 Bacterial sugar transferase AV942_08115 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AV942_08115 PF10531 SLBB domain AV942_08115 PF02563 Polysaccharide biosynthesis/export protein AV942_08120 PF13614 AAA domain AV942_08180 PF00535 Glycosyl transferase family 2 AV942_08195 PF00535 Glycosyl transferase family 2 AV942_08200 PF00534 Glycosyl transferases group 1 AV942_08200 PF13439 Glycosyltransferase Family 4 AV942_08210 PF03808 Glycosyl transferase WecB/TagA/CpsF family AV942_08225 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AV942_08225 PF01409 tRNA synthetases class II core domain (F) AV942_08230 PF03483 B3/4 domain AV942_08230 PF01588 Putative tRNA binding domain AV942_08230 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AV942_08230 PF03147 Ferredoxin-fold anticodon binding domain AV942_08230 PF03484 tRNA synthetase B5 domain AV942_08235 PF00216 Bacterial DNA-binding protein AV942_08245 PF04073 Aminoacyl-tRNA editing domain AV942_08250 PF01804 Penicillin amidase AV942_08255 PF00933 Glycosyl hydrolase family 3 N terminal domain AV942_08260 PF01923 Cobalamin adenosyltransferase AV942_08270 PF17757 UvrB interaction domain AV942_08270 PF02559 CarD-like/TRCF domain AV942_08270 PF00270 DEAD/DEAH box helicase AV942_08270 PF00271 Helicase conserved C-terminal domain AV942_08270 PF03461 TRCF domain AV942_08280 PF02687 FtsX-like permease family AV942_08280 PF12704 MacB-like periplasmic core domain AV942_08290 PF08448 PAS fold AV942_08290 PF00512 His Kinase A (phospho-acceptor) domain AV942_08290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_08290 PF13188 PAS domain AV942_08290 PF00072 Response regulator receiver domain AV942_08305 PF03372 Endonuclease/Exonuclease/phosphatase family AV942_08340 PF07690 Major Facilitator Superfamily AV942_08350 PF00483 Nucleotidyl transferase AV942_08370 PF00682 HMGL-like AV942_08375 PF02785 Biotin carboxylase C-terminal domain AV942_08375 PF00364 Biotin-requiring enzyme AV942_08375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV942_08375 PF00289 Biotin carboxylase, N-terminal domain AV942_08380 PF00378 Enoyl-CoA hydratase/isomerase AV942_08385 PF01039 Carboxyl transferase domain AV942_08390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV942_08390 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_08390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_08395 PF13411 MerR HTH family regulatory protein AV942_08400 PF00108 Thiolase, N-terminal domain AV942_08400 PF02803 Thiolase, C-terminal domain AV942_08410 PF00266 Aminotransferase class-V AV942_08415 PF17151 Periplasmic sensor domain AV942_08415 PF00990 Diguanylate cyclase, GGDEF domain AV942_08425 PF00929 Exonuclease AV942_08425 PF08411 Exonuclease C-terminal AV942_08430 PF13356 Arm DNA-binding domain AV942_08430 PF00589 Phage integrase family AV942_08470 PF09397 Ftsk gamma domain AV942_08470 PF01580 FtsK/SpoIIIE family AV942_08470 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AV942_08470 PF17854 FtsK alpha domain AV942_08510 PF00196 Bacterial regulatory proteins, luxR family AV942_08510 PF00072 Response regulator receiver domain AV942_08525 PF10548 P22AR C-terminal domain AV942_08525 PF02498 BRO family, N-terminal domain AV942_08595 PF00772 DnaB-like helicase N terminal domain AV942_08595 PF03796 DnaB-like helicase C terminal domain AV942_08685 PF10668 Phage terminase small subunit AV942_08685 PF03592 Terminase small subunit AV942_08785 PF00512 His Kinase A (phospho-acceptor) domain AV942_08785 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV942_08785 PF01627 Hpt domain AV942_08785 PF00072 Response regulator receiver domain AV942_08785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_08785 PF00672 HAMP domain AV942_08790 PF01112 Asparaginase AV942_08800 PF02333 Phytase AV942_08830 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AV942_08830 PF00270 DEAD/DEAH box helicase AV942_08830 PF04408 Helicase associated domain (HA2) AV942_08830 PF00271 Helicase conserved C-terminal domain AV942_08830 PF11898 Domain of unknown function (DUF3418) AV942_08845 PF10672 S-adenosylmethionine-dependent methyltransferase AV942_08845 PF17785 PUA-like domain AV942_08850 PF00698 Acyl transferase domain AV942_08850 PF02801 Beta-ketoacyl synthase, C-terminal domain AV942_08850 PF08240 Alcohol dehydrogenase GroES-like domain AV942_08850 PF00550 Phosphopantetheine attachment site AV942_08850 PF16197 Ketoacyl-synthetase C-terminal extension AV942_08850 PF00109 Beta-ketoacyl synthase, N-terminal domain AV942_08850 PF14765 Polyketide synthase dehydratase AV942_08850 PF08659 KR domain AV942_08855 PF00075 RNase H AV942_08860 PF00929 Exonuclease AV942_08890 PF12792 CSS motif domain associated with EAL AV942_08890 PF00563 EAL domain AV942_08895 PF00005 ABC transporter AV942_08900 PF02687 FtsX-like permease family AV942_08900 PF12704 MacB-like periplasmic core domain AV942_08905 PF00375 Sodium:dicarboxylate symporter family AV942_08915 PF04996 Succinylarginine dihydrolase AV942_08925 PF01131 DNA topoisomerase AV942_08925 PF08272 Topoisomerase I zinc-ribbon-like AV942_08925 PF01396 Topoisomerase DNA binding C4 zinc finger AV942_08925 PF01751 Toprim domain AV942_08940 PF12804 MobA-like NTP transferase domain AV942_08945 PF02634 FdhD/NarQ family AV942_08950 PF00384 Molybdopterin oxidoreductase AV942_08955 PF13673 Acetyltransferase (GNAT) domain AV942_08970 PF10150 Ribonuclease E/G family AV942_08970 PF00575 S1 RNA binding domain AV942_08970 PF12111 Polyribonucleotide phosphorylase C terminal AV942_08975 PF00849 RNA pseudouridylate synthase AV942_08975 PF01479 S4 domain AV942_08980 PF13419 Haloacid dehalogenase-like hydrolase AV942_08985 PF02545 Maf-like protein AV942_08990 PF02620 Large ribosomal RNA subunit accumulation protein YceD AV942_08995 PF01783 Ribosomal L32p protein family AV942_09000 PF02504 Fatty acid synthesis protein AV942_09005 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AV942_09005 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AV942_09010 PF00698 Acyl transferase domain AV942_09020 PF00550 Phosphopantetheine attachment site AV942_09025 PF02801 Beta-ketoacyl synthase, C-terminal domain AV942_09025 PF00109 Beta-ketoacyl synthase, N-terminal domain AV942_09030 PF01063 Amino-transferase class IV AV942_09035 PF02618 YceG-like family AV942_09040 PF02223 Thymidylate kinase AV942_09045 PF09115 DNA polymerase III, delta subunit, C terminal AV942_09050 PF01026 TatD related DNase AV942_09060 PF13460 NAD(P)H-binding AV942_09065 PF00072 Response regulator receiver domain AV942_09065 PF00990 Diguanylate cyclase, GGDEF domain AV942_09090 PF00561 alpha/beta hydrolase fold AV942_09095 PF00378 Enoyl-CoA hydratase/isomerase AV942_09095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV942_09095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV942_09100 PF02803 Thiolase, C-terminal domain AV942_09100 PF00108 Thiolase, N-terminal domain AV942_09105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_09105 PF12806 Acetyl-CoA dehydrogenase C-terminal like AV942_09105 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_09105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV942_09120 PF04198 Putative sugar-binding domain AV942_09125 PF13419 Haloacid dehalogenase-like hydrolase AV942_09135 PF01232 Mannitol dehydrogenase Rossmann domain AV942_09135 PF08125 Mannitol dehydrogenase C-terminal domain AV942_09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_09145 PF03466 LysR substrate binding domain AV942_09150 PF01575 MaoC like domain AV942_09155 PF00924 Mechanosensitive ion channel AV942_09160 PF07715 TonB-dependent Receptor Plug Domain AV942_09160 PF00593 TonB dependent receptor AV942_09165 PF01329 Pterin 4 alpha carbinolamine dehydratase AV942_09180 PF00072 Response regulator receiver domain AV942_09180 PF00512 His Kinase A (phospho-acceptor) domain AV942_09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_09180 PF00989 PAS fold AV942_09180 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV942_09180 PF01627 Hpt domain AV942_09185 PF00072 Response regulator receiver domain AV942_09190 PF02576 RimP N-terminal domain AV942_09190 PF17384 RimP C-terminal SH3 domain AV942_09195 PF00575 S1 RNA binding domain AV942_09195 PF13184 NusA-like KH domain AV942_09195 PF08529 NusA N-terminal domain AV942_09200 PF08364 Bacterial translation initiation factor IF-2 associated region AV942_09200 PF04760 Translation initiation factor IF-2, N-terminal region AV942_09200 PF11987 Translation-initiation factor 2 AV942_09200 PF00009 Elongation factor Tu GTP binding domain AV942_09205 PF02033 Ribosome-binding factor A AV942_09210 PF16198 tRNA pseudouridylate synthase B C-terminal domain AV942_09210 PF09157 Pseudouridine synthase II TruB, C-terminal AV942_09210 PF01509 TruB family pseudouridylate synthase (N terminal domain) AV942_09220 PF00312 Ribosomal protein S15 AV942_09225 PF01479 S4 domain AV942_09225 PF00849 RNA pseudouridylate synthase AV942_09235 PF00583 Acetyltransferase (GNAT) family AV942_09235 PF00795 Carbon-nitrogen hydrolase AV942_09265 PF00578 AhpC/TSA family AV942_09265 PF10417 C-terminal domain of 1-Cys peroxiredoxin AV942_09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_09270 PF13192 Thioredoxin domain AV942_09310 PF08497 Radical SAM N-terminal AV942_09310 PF04055 Radical SAM superfamily AV942_09310 PF11842 Domain of unknown function (DUF3362) AV942_09325 PF00593 TonB dependent receptor AV942_09325 PF07715 TonB-dependent Receptor Plug Domain AV942_09330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV942_09330 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_09340 PF13416 Bacterial extracellular solute-binding protein AV942_09350 PF00005 ABC transporter AV942_09355 PF01066 CDP-alcohol phosphatidyltransferase AV942_09380 PF00360 Phytochrome region AV942_09380 PF00990 Diguanylate cyclase, GGDEF domain AV942_09380 PF01590 GAF domain AV942_09380 PF00563 EAL domain AV942_09400 PF02796 Helix-turn-helix domain of resolvase AV942_09400 PF00239 Resolvase, N terminal domain AV942_09460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV942_09465 PF01668 SmpB protein AV942_09470 PF03364 Polyketide cyclase / dehydrase and lipid transport AV942_09475 PF03658 RnfH family Ubiquitin AV942_09485 PF02028 BCCT, betaine/carnitine/choline family transporter AV942_09490 PF07715 TonB-dependent Receptor Plug Domain AV942_09490 PF00593 TonB dependent receptor AV942_09495 PF13181 Tetratricopeptide repeat AV942_09505 PF03618 Kinase/pyrophosphorylase AV942_09510 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AV942_09510 PF02896 PEP-utilising enzyme, TIM barrel domain AV942_09510 PF00391 PEP-utilising enzyme, mobile domain AV942_09520 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV942_09525 PF00111 2Fe-2S iron-sulfur cluster binding domain AV942_09525 PF01799 [2Fe-2S] binding domain AV942_09545 PF08007 Cupin superfamily protein AV942_09550 PF00211 Adenylate and Guanylate cyclase catalytic domain AV942_09555 PF00206 Lyase AV942_09555 PF08328 Adenylosuccinate lyase C-terminal AV942_09560 PF04356 Protein of unknown function (DUF489) AV942_09570 PF00849 RNA pseudouridylate synthase AV942_09575 PF03971 Monomeric isocitrate dehydrogenase AV942_09580 PF00313 'Cold-shock' DNA-binding domain AV942_09585 PF02617 ATP-dependent Clp protease adaptor protein ClpS AV942_09590 PF00004 ATPase family associated with various cellular activities (AAA) AV942_09590 PF07724 AAA domain (Cdc48 subfamily) AV942_09590 PF17871 AAA lid domain AV942_09590 PF02861 Clp amino terminal domain, pathogenicity island component AV942_09590 PF10431 C-terminal, D2-small domain, of ClpB protein AV942_09595 PF01176 Translation initiation factor 1A / IF-1 AV942_09600 PF04376 Arginine-tRNA-protein transferase, N terminus AV942_09600 PF04377 Arginine-tRNA-protein transferase, C terminus AV942_09605 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AV942_09610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_09615 PF04217 Protein of unknown function, DUF412 AV942_09620 PF10263 SprT-like family AV942_09625 PF01343 Peptidase family S49 AV942_09640 PF00881 Nitroreductase family AV942_09650 PF17763 Glutaminase/Asparaginase C-terminal domain AV942_09650 PF00710 Asparaginase, N-terminal AV942_09655 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AV942_09655 PF04055 Radical SAM superfamily AV942_09660 PF03099 Biotin/lipoate A/B protein ligase family AV942_09665 PF04359 Protein of unknown function (DUF493) AV942_09670 PF00768 D-alanyl-D-alanine carboxypeptidase AV942_09670 PF07943 Penicillin-binding protein 5, C-terminal domain AV942_09675 PF03330 Lytic transglycolase AV942_09675 PF05036 Sporulation related domain AV942_09680 PF01098 Cell cycle protein AV942_09685 PF03717 Penicillin-binding Protein dimerisation domain AV942_09685 PF00905 Penicillin binding protein transpeptidase domain AV942_09690 PF02590 Predicted SPOUT methyltransferase AV942_09700 PF01467 Cytidylyltransferase-like AV942_09705 PF06144 DNA polymerase III, delta subunit AV942_09705 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AV942_09710 PF04390 Lipopolysaccharide-assembly AV942_09715 PF13603 Leucyl-tRNA synthetase, Domain 2 AV942_09715 PF00133 tRNA synthetases class I (I, L, M and V) AV942_09715 PF08264 Anticodon-binding domain of tRNA AV942_09730 PF05362 Lon protease (S16) C-terminal proteolytic domain AV942_09730 PF13654 AAA domain AV942_09735 PF12697 Alpha/beta hydrolase family AV942_09740 PF00990 Diguanylate cyclase, GGDEF domain AV942_09745 PF00106 short chain dehydrogenase AV942_09750 PF01985 CRS1 / YhbY (CRM) domain AV942_09755 PF01728 FtsJ-like methyltransferase AV942_09760 PF17862 AAA+ lid domain AV942_09760 PF06480 FtsH Extracellular AV942_09760 PF01434 Peptidase family M41 AV942_09760 PF00004 ATPase family associated with various cellular activities (AAA) AV942_09765 PF00809 Pterin binding enzyme AV942_09770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV942_09770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV942_09770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV942_09770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV942_09775 PF00121 Triosephosphate isomerase AV942_09780 PF03840 Preprotein translocase SecG subunit AV942_09790 PF00563 EAL domain AV942_09790 PF00990 Diguanylate cyclase, GGDEF domain AV942_09790 PF03707 Bacterial signalling protein N terminal repeat AV942_09790 PF13188 PAS domain AV942_09800 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AV942_09800 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV942_09805 PF02142 MGS-like domain AV942_09805 PF00781 Diacylglycerol kinase catalytic domain AV942_09835 PF00474 Sodium:solute symporter family AV942_09860 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AV942_09860 PF00013 KH domain AV942_09860 PF00575 S1 RNA binding domain AV942_09860 PF01138 3' exoribonuclease family, domain 1 AV942_09860 PF03725 3' exoribonuclease family, domain 2 AV942_09885 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AV942_09885 PF03033 Glycosyltransferase family 28 N-terminal domain AV942_09995 PF03544 Gram-negative bacterial TonB protein C-terminal AV942_10000 PF13005 zinc-finger binding domain of transposase IS66 AV942_10000 PF13817 IS66 C-terminal element AV942_10000 PF13007 Transposase C of IS166 homeodomain AV942_10000 PF03050 Transposase IS66 family AV942_10020 PF07719 Tetratricopeptide repeat AV942_10020 PF13181 Tetratricopeptide repeat AV942_10035 PF06470 SMC proteins Flexible Hinge Domain AV942_10035 PF02463 RecF/RecN/SMC N terminal domain AV942_10040 PF04354 ZipA, C-terminal FtsZ-binding domain AV942_10045 PF00533 BRCA1 C Terminus (BRCT) domain AV942_10045 PF01653 NAD-dependent DNA ligase adenylation domain AV942_10045 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AV942_10045 PF12826 Helix-hairpin-helix motif AV942_10045 PF03120 NAD-dependent DNA ligase OB-fold domain AV942_10060 PF00664 ABC transporter transmembrane region AV942_10060 PF00005 ABC transporter AV942_10065 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AV942_10070 PF03966 Trm112p-like protein AV942_10075 PF02348 Cytidylyltransferase AV942_10085 PF18693 TRAM domain AV942_10085 PF04055 Radical SAM superfamily AV942_10085 PF00919 Uncharacterized protein family UPF0004 AV942_10100 PF00899 ThiF family AV942_10105 PF13409 Glutathione S-transferase, N-terminal domain AV942_10110 PF05726 Pirin C-terminal cupin domain AV942_10110 PF02678 Pirin AV942_10115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AV942_10115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AV942_10115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AV942_10115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AV942_10125 PF00285 Citrate synthase, C-terminal domain AV942_10130 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AV942_10135 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AV942_10140 PF00890 FAD binding domain AV942_10140 PF02910 Fumarate reductase flavoprotein C-term AV942_10145 PF13085 2Fe-2S iron-sulfur cluster binding domain AV942_10150 PF02779 Transketolase, pyrimidine binding domain AV942_10150 PF16078 2-oxoglutarate dehydrogenase N-terminus AV942_10150 PF00676 Dehydrogenase E1 component AV942_10150 PF16870 2-oxoglutarate dehydrogenase C-terminal AV942_10155 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV942_10155 PF00364 Biotin-requiring enzyme AV942_10155 PF02817 e3 binding domain AV942_10160 PF08442 ATP-grasp domain AV942_10160 PF00549 CoA-ligase AV942_10165 PF02629 CoA binding domain AV942_10165 PF00549 CoA-ligase AV942_10175 PF04820 Tryptophan halogenase AV942_10185 PF17967 Pullulanase N2 domain AV942_10185 PF18494 Pullulanase Ins domain AV942_10185 PF03714 Bacterial pullanase-associated domain AV942_10185 PF11852 Domain of unknown function (DUF3372) AV942_10185 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AV942_10190 PF01734 Patatin-like phospholipase AV942_10205 PF02903 Alpha amylase, N-terminal ig-like domain AV942_10205 PF16657 Maltogenic Amylase, C-terminal domain AV942_10205 PF00128 Alpha amylase, catalytic domain AV942_10210 PF09087 Cyclomaltodextrinase, N-terminal AV942_10210 PF00128 Alpha amylase, catalytic domain AV942_10210 PF10438 Cyclo-malto-dextrinase C-terminal domain AV942_10220 PF00686 Starch binding domain AV942_10220 PF02806 Alpha amylase, C-terminal all-beta domain AV942_10220 PF01833 IPT/TIG domain AV942_10220 PF00128 Alpha amylase, catalytic domain AV942_10225 PF00356 Bacterial regulatory proteins, lacI family AV942_10230 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AV942_10230 PF00749 tRNA synthetases class I (E and Q), catalytic domain AV942_10235 PF00106 short chain dehydrogenase AV942_10240 PF12262 Bacterial virulence factor lipase N-terminal AV942_10245 PF01804 Penicillin amidase AV942_10250 PF01343 Peptidase family S49 AV942_10250 PF08496 Peptidase family S49 N-terminal AV942_10265 PF01784 NIF3 (NGG1p interacting factor 3) AV942_10275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV942_10275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV942_10280 PF00255 Glutathione peroxidase AV942_10285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AV942_10285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV942_10295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV942_10295 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_10295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_10300 PF00378 Enoyl-CoA hydratase/isomerase AV942_10305 PF13847 Methyltransferase domain AV942_10315 PF00884 Sulfatase AV942_10315 PF11893 Domain of unknown function (DUF3413) AV942_10320 PF07208 Protein of unknown function (DUF1414) AV942_10325 PF04245 37-kD nucleoid-associated bacterial protein AV942_10355 PF07694 5TMR of 5TMR-LYT AV942_10355 PF06580 Histidine kinase AV942_10360 PF00072 Response regulator receiver domain AV942_10360 PF04397 LytTr DNA-binding domain AV942_10365 PF00365 Phosphofructokinase AV942_10380 PF16123 Hydroxyacylglutathione hydrolase C-terminus AV942_10380 PF00753 Metallo-beta-lactamase superfamily AV942_10395 PF01627 Hpt domain AV942_10395 PF00072 Response regulator receiver domain AV942_10395 PF00989 PAS fold AV942_10395 PF00512 His Kinase A (phospho-acceptor) domain AV942_10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_10395 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV942_10415 PF00270 DEAD/DEAH box helicase AV942_10415 PF00271 Helicase conserved C-terminal domain AV942_10420 PF01144 Coenzyme A transferase AV942_10425 PF01144 Coenzyme A transferase AV942_10430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_10430 PF03466 LysR substrate binding domain AV942_10445 PF03466 LysR substrate binding domain AV942_10445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_10450 PF03313 Serine dehydratase alpha chain AV942_10450 PF03315 Serine dehydratase beta chain AV942_10455 PF00293 NUDIX domain AV942_10460 PF00425 chorismate binding enzyme AV942_10460 PF04715 Anthranilate synthase component I, N terminal region AV942_10475 PF02646 RmuC family AV942_10480 PF13860 FlgD Ig-like domain AV942_10480 PF02225 PA domain AV942_10480 PF00082 Subtilase family AV942_10480 PF05922 Peptidase inhibitor I9 AV942_10485 PF00676 Dehydrogenase E1 component AV942_10490 PF02779 Transketolase, pyrimidine binding domain AV942_10490 PF02780 Transketolase, C-terminal domain AV942_10495 PF00364 Biotin-requiring enzyme AV942_10495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV942_10495 PF02817 e3 binding domain AV942_10500 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AV942_10505 PF00069 Protein kinase domain AV942_10515 PF00132 Bacterial transferase hexapeptide (six repeats) AV942_10520 PF00266 Aminotransferase class-V AV942_10530 PF13185 GAF domain AV942_10540 PF04352 ProQ/FINO family AV942_10540 PF17516 ProQ C-terminal domain AV942_10545 PF17804 Tail specific protease N-terminal domain AV942_10545 PF00595 PDZ domain AV942_10545 PF11818 C-terminal domain of tail specific protease (DUF3340) AV942_10545 PF03572 Peptidase family S41 AV942_10550 PF00209 Sodium:neurotransmitter symporter family AV942_10560 PF01433 Peptidase family M1 domain AV942_10560 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AV942_10560 PF11940 Domain of unknown function (DUF3458) Ig-like fold AV942_10575 PF07044 Protein of unknown function (DUF1329) AV942_10590 PF05088 Bacterial NAD-glutamate dehydrogenase AV942_10595 PF01180 Dihydroorotate dehydrogenase AV942_10600 PF01170 Putative RNA methylase family UPF0020 AV942_10600 PF10672 S-adenosylmethionine-dependent methyltransferase AV942_10600 PF02926 THUMP domain AV942_10620 PF04957 Ribosome modulation factor AV942_10625 PF07977 FabA-like domain AV942_10635 PF00875 DNA photolyase AV942_10635 PF03441 FAD binding domain of DNA photolyase AV942_10640 PF03441 FAD binding domain of DNA photolyase AV942_10640 PF00875 DNA photolyase AV942_10645 PF00875 DNA photolyase AV942_10645 PF03441 FAD binding domain of DNA photolyase AV942_10650 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AV942_10660 PF00589 Phage integrase family AV942_10660 PF02899 Phage integrase, N-terminal SAM-like domain AV942_10670 PF01219 Prokaryotic diacylglycerol kinase AV942_10675 PF00582 Universal stress protein family AV942_10685 PF01645 Conserved region in glutamate synthase AV942_10690 PF00999 Sodium/hydrogen exchanger family AV942_10695 PF00210 Ferritin-like domain AV942_10700 PF00210 Ferritin-like domain AV942_10710 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV942_10725 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AV942_10725 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AV942_10735 PF00403 Heavy-metal-associated domain AV942_10750 PF00027 Cyclic nucleotide-binding domain AV942_10750 PF13545 Crp-like helix-turn-helix domain AV942_10755 PF00582 Universal stress protein family AV942_10760 PF01171 PP-loop family AV942_10765 PF01734 Patatin-like phospholipase AV942_10785 PF01810 LysE type translocator AV942_10790 PF02146 Sir2 family AV942_10795 PF00581 Rhodanese-like domain AV942_10800 PF08534 Redoxin AV942_10825 PF01066 CDP-alcohol phosphatidyltransferase AV942_10830 PF02151 UvrB/uvrC motif AV942_10830 PF01541 GIY-YIG catalytic domain AV942_10830 PF08459 UvrC Helix-hairpin-helix N-terminal AV942_10835 PF00072 Response regulator receiver domain AV942_10835 PF00196 Bacterial regulatory proteins, luxR family AV942_10840 PF00155 Aminotransferase class I and II AV942_10860 PF07681 DoxX AV942_10865 PF03466 LysR substrate binding domain AV942_10865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_10880 PF01027 Inhibitor of apoptosis-promoting Bax1 AV942_10885 PF02635 DsrE/DsrF-like family AV942_10900 PF04358 DsrC like protein AV942_10915 PF07715 TonB-dependent Receptor Plug Domain AV942_10915 PF00593 TonB dependent receptor AV942_10920 PF02403 Seryl-tRNA synthetase N-terminal domain AV942_10920 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV942_10925 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AV942_10930 PF00004 ATPase family associated with various cellular activities (AAA) AV942_10930 PF16193 AAA C-terminal domain AV942_10930 PF12002 MgsA AAA+ ATPase C terminal AV942_10940 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AV942_10940 PF17854 FtsK alpha domain AV942_10940 PF09397 Ftsk gamma domain AV942_10940 PF01580 FtsK/SpoIIIE family AV942_10945 PF01037 Lrp/AsnC ligand binding domain AV942_10950 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AV942_10950 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AV942_10955 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AV942_10960 PF18073 Rubredoxin metal binding domain AV942_10975 PF00216 Bacterial DNA-binding protein AV942_10980 PF00575 S1 RNA binding domain AV942_10985 PF02224 Cytidylate kinase AV942_10990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AV942_10995 PF00266 Aminotransferase class-V AV942_11000 PF03989 DNA gyrase C-terminal domain, beta-propeller AV942_11000 PF00521 DNA gyrase/topoisomerase IV, subunit A AV942_11010 PF02867 Ribonucleotide reductase, barrel domain AV942_11010 PF00317 Ribonucleotide reductase, all-alpha domain AV942_11010 PF03477 ATP cone domain AV942_11015 PF00268 Ribonucleotide reductase, small chain AV942_11020 PF00111 2Fe-2S iron-sulfur cluster binding domain AV942_11030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV942_11030 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_11035 PF00563 EAL domain AV942_11035 PF03707 Bacterial signalling protein N terminal repeat AV942_11035 PF00990 Diguanylate cyclase, GGDEF domain AV942_11040 PF00892 EamA-like transporter family AV942_11045 PF01259 SAICAR synthetase AV942_11050 PF06804 NlpB/DapX lipoprotein AV942_11055 PF00701 Dihydrodipicolinate synthetase family AV942_11065 PF00578 AhpC/TSA family AV942_11070 PF01594 AI-2E family transporter AV942_11075 PF01435 Peptidase family M48 AV942_11085 PF03960 ArsC family AV942_11090 PF03358 NADPH-dependent FMN reductase AV942_11100 PF00308 Bacterial dnaA protein AV942_11110 PF00586 AIR synthase related protein, N-terminal domain AV942_11110 PF02769 AIR synthase related protein, C-terminal domain AV942_11115 PF00551 Formyl transferase AV942_11125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV942_11125 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_11125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_11125 PF09317 Domain of unknown function (DUF1974) AV942_11135 PF00072 Response regulator receiver domain AV942_11135 PF00196 Bacterial regulatory proteins, luxR family AV942_11140 PF13649 Methyltransferase domain AV942_11145 PF08003 Protein of unknown function (DUF1698) AV942_11150 PF00485 Phosphoribulokinase / Uridine kinase family AV942_11165 PF00128 Alpha amylase, catalytic domain AV942_11170 PF13419 Haloacid dehalogenase-like hydrolase AV942_11175 PF03453 MoeA N-terminal region (domain I and II) AV942_11175 PF03454 MoeA C-terminal region (domain IV) AV942_11175 PF00994 Probable molybdopterin binding domain AV942_11180 PF01554 MatE AV942_11195 PF00004 ATPase family associated with various cellular activities (AAA) AV942_11195 PF17862 AAA+ lid domain AV942_11195 PF01434 Peptidase family M41 AV942_11200 PF00291 Pyridoxal-phosphate dependent enzyme AV942_11230 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AV942_11270 PF02567 Phenazine biosynthesis-like protein AV942_11280 PF00378 Enoyl-CoA hydratase/isomerase AV942_11295 PF00255 Glutathione peroxidase AV942_11300 PF02525 Flavodoxin-like fold AV942_11310 PF01053 Cys/Met metabolism PLP-dependent enzyme AV942_11325 PF00155 Aminotransferase class I and II AV942_11330 PF10459 Peptidase S46 AV942_11335 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AV942_11350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV942_11350 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_11350 PF12806 Acetyl-CoA dehydrogenase C-terminal like AV942_11350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_11355 PF12833 Helix-turn-helix domain AV942_11355 PF07883 Cupin domain AV942_11360 PF00593 TonB dependent receptor AV942_11360 PF07715 TonB-dependent Receptor Plug Domain AV942_11370 PF00326 Prolyl oligopeptidase family AV942_11370 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AV942_11375 PF00873 AcrB/AcrD/AcrF family AV942_11380 PF13533 Biotin-lipoyl like AV942_11390 PF01012 Electron transfer flavoprotein domain AV942_11390 PF00766 Electron transfer flavoprotein FAD-binding domain AV942_11395 PF01012 Electron transfer flavoprotein domain AV942_11405 PF00816 H-NS histone family AV942_11410 PF00561 alpha/beta hydrolase fold AV942_11420 PF00258 Flavodoxin AV942_11425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_11425 PF00672 HAMP domain AV942_11430 PF01475 Ferric uptake regulator family AV942_11435 PF01063 Amino-transferase class IV AV942_11440 PF02626 Carboxyltransferase domain, subdomain A and B AV942_11445 PF02682 Carboxyltransferase domain, subdomain C and D AV942_11450 PF03746 LamB/YcsF family AV942_11455 PF17783 CvfB-like winged helix domain AV942_11455 PF13509 S1 domain AV942_11460 PF02566 OsmC-like protein AV942_11465 PF13533 Biotin-lipoyl like AV942_11470 PF00873 AcrB/AcrD/AcrF family AV942_11475 PF00873 AcrB/AcrD/AcrF family AV942_11490 PF00155 Aminotransferase class I and II AV942_11510 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AV942_11510 PF00034 Cytochrome c AV942_11510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV942_11515 PF00111 2Fe-2S iron-sulfur cluster binding domain AV942_11515 PF01799 [2Fe-2S] binding domain AV942_11540 PF12146 Serine aminopeptidase, S33 AV942_11545 PF12833 Helix-turn-helix domain AV942_11545 PF06719 AraC-type transcriptional regulator N-terminus AV942_11560 PF01966 HD domain AV942_11560 PF13286 Phosphohydrolase-associated domain AV942_11565 PF00174 Oxidoreductase molybdopterin binding domain AV942_11570 PF01794 Ferric reductase like transmembrane component AV942_11585 PF02810 SEC-C motif AV942_11590 PF00107 Zinc-binding dehydrogenase AV942_11590 PF08240 Alcohol dehydrogenase GroES-like domain AV942_11600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV942_11600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_11600 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_11610 PF07715 TonB-dependent Receptor Plug Domain AV942_11610 PF00593 TonB dependent receptor AV942_11630 PF06969 HemN C-terminal domain AV942_11630 PF04055 Radical SAM superfamily AV942_11635 PF03459 TOBE domain AV942_11635 PF00005 ABC transporter AV942_11640 PF00528 Binding-protein-dependent transport system inner membrane component AV942_11650 PF02391 MoaE protein AV942_11655 PF02597 ThiS family AV942_11660 PF01967 MoaC family AV942_11665 PF00994 Probable molybdopterin binding domain AV942_11670 PF00899 ThiF family AV942_11680 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AV942_11685 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AV942_11700 PF00155 Aminotransferase class I and II AV942_11705 PF03435 Saccharopine dehydrogenase NADP binding domain AV942_11710 PF00155 Aminotransferase class I and II AV942_11725 PF01717 Cobalamin-independent synthase, Catalytic domain AV942_11725 PF08267 Cobalamin-independent synthase, N-terminal domain AV942_11730 PF00593 TonB dependent receptor AV942_11730 PF07715 TonB-dependent Receptor Plug Domain AV942_11740 PF00892 EamA-like transporter family AV942_11755 PF13538 UvrD-like helicase C-terminal domain AV942_11760 PF13361 UvrD-like helicase C-terminal domain AV942_11760 PF12705 PD-(D/E)XK nuclease superfamily AV942_11760 PF00580 UvrD/REP helicase N-terminal domain AV942_11765 PF17946 RecC C-terminal domain AV942_11780 PF00501 AMP-binding enzyme AV942_11785 PF00563 EAL domain AV942_11785 PF01590 GAF domain AV942_11785 PF00360 Phytochrome region AV942_11785 PF00990 Diguanylate cyclase, GGDEF domain AV942_11790 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AV942_11790 PF12706 Beta-lactamase superfamily domain AV942_11790 PF17770 Ribonuclease J C-terminal domain AV942_11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_11805 PF03466 LysR substrate binding domain AV942_11820 PF01022 Bacterial regulatory protein, arsR family AV942_11830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_11830 PF03466 LysR substrate binding domain AV942_11840 PF00072 Response regulator receiver domain AV942_11840 PF02954 Bacterial regulatory protein, Fis family AV942_11840 PF00158 Sigma-54 interaction domain AV942_11850 PF01590 GAF domain AV942_11850 PF00360 Phytochrome region AV942_11850 PF08446 PAS fold AV942_11850 PF00512 His Kinase A (phospho-acceptor) domain AV942_11850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_11855 PF00072 Response regulator receiver domain AV942_11860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_11860 PF00072 Response regulator receiver domain AV942_11860 PF09308 LuxQ, periplasmic AV942_11860 PF00512 His Kinase A (phospho-acceptor) domain AV942_11905 PF07023 Protein of unknown function (DUF1315) AV942_11920 PF01235 Sodium:alanine symporter family AV942_11925 PF00246 Zinc carboxypeptidase AV942_11925 PF18027 Cytosolic carboxypeptidase N-terminal domain AV942_11930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV942_11930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AV942_11940 PF01641 SelR domain AV942_11945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV942_11945 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AV942_11950 PF00128 Alpha amylase, catalytic domain AV942_11950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AV942_11955 PF00128 Alpha amylase, catalytic domain AV942_11955 PF02806 Alpha amylase, C-terminal all-beta domain AV942_11955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AV942_11960 PF02446 4-alpha-glucanotransferase AV942_11965 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AV942_11965 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AV942_11970 PF01263 Aldose 1-epimerase AV942_11975 PF01081 KDPG and KHG aldolase AV942_11980 PF02685 Glucokinase AV942_11985 PF00920 Dehydratase family AV942_11990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AV942_12000 PF01380 SIS domain AV942_12000 PF01418 Helix-turn-helix domain, rpiR family AV942_12005 PF02887 Pyruvate kinase, alpha/beta domain AV942_12005 PF00224 Pyruvate kinase, barrel domain AV942_12010 PF07969 Amidohydrolase family AV942_12015 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AV942_12015 PF12833 Helix-turn-helix domain AV942_12020 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_12020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV942_12020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_12020 PF12806 Acetyl-CoA dehydrogenase C-terminal like AV942_12025 PF01012 Electron transfer flavoprotein domain AV942_12030 PF01012 Electron transfer flavoprotein domain AV942_12030 PF00766 Electron transfer flavoprotein FAD-binding domain AV942_12040 PF03600 Citrate transporter AV942_12040 PF02080 TrkA-C domain AV942_12055 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AV942_12060 PF00920 Dehydratase family AV942_12070 PF01418 Helix-turn-helix domain, rpiR family AV942_12070 PF01380 SIS domain AV942_12075 PF00224 Pyruvate kinase, barrel domain AV942_12075 PF02887 Pyruvate kinase, alpha/beta domain AV942_12080 PF01048 Phosphorylase superfamily AV942_12100 PF04972 BON domain AV942_12130 PF09347 Domain of unknown function (DUF1989) AV942_12160 PF04231 Endonuclease I AV942_12165 PF02743 Cache domain AV942_12165 PF00672 HAMP domain AV942_12165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_12180 PF03466 LysR substrate binding domain AV942_12180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_12185 PF00465 Iron-containing alcohol dehydrogenase AV942_12190 PF00563 EAL domain AV942_12190 PF00990 Diguanylate cyclase, GGDEF domain AV942_12190 PF08447 PAS fold AV942_12190 PF08448 PAS fold AV942_12200 PF11849 Domain of unknown function (DUF3369) AV942_12205 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV942_12205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_12205 PF00512 His Kinase A (phospho-acceptor) domain AV942_12225 PF00145 C-5 cytosine-specific DNA methylase AV942_12285 PF00939 Sodium:sulfate symporter transmembrane region AV942_12290 PF00692 dUTPase AV942_12295 PF10609 NUBPL iron-transfer P-loop NTPase AV942_12300 PF01588 Putative tRNA binding domain AV942_12300 PF09334 tRNA synthetases class I (M) AV942_12300 PF08264 Anticodon-binding domain of tRNA AV942_12305 PF05552 Conserved TM helix AV942_12305 PF00924 Mechanosensitive ion channel AV942_12310 PF08241 Methyltransferase domain AV942_12315 PF00753 Metallo-beta-lactamase superfamily AV942_12315 PF16123 Hydroxyacylglutathione hydrolase C-terminus AV942_12320 PF01464 Transglycosylase SLT domain AV942_12320 PF01476 LysM domain AV942_12345 PF09190 DALR domain AV942_12345 PF01406 tRNA synthetases class I (C) catalytic domain AV942_12350 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AV942_12355 PF00149 Calcineurin-like phosphoesterase AV942_12365 PF01145 SPFH domain / Band 7 family AV942_12365 PF15975 Flotillin AV942_12375 PF00128 Alpha amylase, catalytic domain AV942_12380 PF01638 HxlR-like helix-turn-helix AV942_12385 PF00107 Zinc-binding dehydrogenase AV942_12385 PF08240 Alcohol dehydrogenase GroES-like domain AV942_12390 PF18011 C-terminal domain found in long catalases AV942_12390 PF06628 Catalase-related immune-responsive AV942_12390 PF00199 Catalase AV942_12395 PF00107 Zinc-binding dehydrogenase AV942_12395 PF08240 Alcohol dehydrogenase GroES-like domain AV942_12400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_12400 PF03466 LysR substrate binding domain AV942_12425 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AV942_12435 PF00156 Phosphoribosyl transferase domain AV942_12440 PF02674 Colicin V production protein AV942_12445 PF05036 Sporulation related domain AV942_12450 PF02875 Mur ligase family, glutamate ligase domain AV942_12450 PF08245 Mur ligase middle domain AV942_12455 PF17848 Acetyl-coA carboxylase zinc finger domain AV942_12455 PF01039 Carboxyl transferase domain AV942_12460 PF01416 tRNA pseudouridine synthase AV942_12470 PF01118 Semialdehyde dehydrogenase, NAD binding domain AV942_12470 PF02774 Semialdehyde dehydrogenase, dimerisation domain AV942_12475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV942_12475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV942_12475 PF11890 Domain of unknown function (DUF3410) AV942_12480 PF00596 Class II Aldolase and Adducin N-terminal domain AV942_12495 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AV942_12500 PF00144 Beta-lactamase AV942_12505 PF00109 Beta-ketoacyl synthase, N-terminal domain AV942_12505 PF02801 Beta-ketoacyl synthase, C-terminal domain AV942_12510 PF00501 AMP-binding enzyme AV942_12510 PF13193 AMP-binding enzyme C-terminal domain AV942_12520 PF01266 FAD dependent oxidoreductase AV942_12520 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AV942_12555 PF13411 MerR HTH family regulatory protein AV942_12560 PF00107 Zinc-binding dehydrogenase AV942_12560 PF08240 Alcohol dehydrogenase GroES-like domain AV942_12590 PF00005 ABC transporter AV942_12595 PF02667 Short chain fatty acid transporter AV942_12600 PF01627 Hpt domain AV942_12600 PF00512 His Kinase A (phospho-acceptor) domain AV942_12600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_12600 PF00672 HAMP domain AV942_12600 PF00072 Response regulator receiver domain AV942_12600 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV942_12605 PF02627 Carboxymuconolactone decarboxylase family AV942_12610 PF00675 Insulinase (Peptidase family M16) AV942_12610 PF05193 Peptidase M16 inactive domain AV942_12625 PF04315 Elongation factor P hydroxylase AV942_12655 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV942_12655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_12660 PF00378 Enoyl-CoA hydratase/isomerase AV942_12665 PF00440 Bacterial regulatory proteins, tetR family AV942_12665 PF02909 Tetracyclin repressor-like, C-terminal domain AV942_12670 PF05199 GMC oxidoreductase AV942_12670 PF00732 GMC oxidoreductase AV942_12680 PF06974 Protein of unknown function (DUF1298) AV942_12680 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AV942_12690 PF04286 Protein of unknown function (DUF445) AV942_12715 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AV942_12715 PF00326 Prolyl oligopeptidase family AV942_12720 PF07840 FadR C-terminal domain AV942_12720 PF00392 Bacterial regulatory proteins, gntR family AV942_12725 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AV942_12730 PF02600 Disulfide bond formation protein DsbB AV942_12735 PF13302 Acetyltransferase (GNAT) domain AV942_12745 PF03692 Putative zinc- or iron-chelating domain AV942_12750 PF01557 Fumarylacetoacetate (FAA) hydrolase family AV942_12760 PF05166 YcgL domain AV942_12765 PF01612 3'-5' exonuclease AV942_12765 PF00570 HRDC domain AV942_12770 PF13193 AMP-binding enzyme C-terminal domain AV942_12770 PF00501 AMP-binding enzyme AV942_12775 PF12697 Alpha/beta hydrolase family AV942_12790 PF00814 Glycoprotease family AV942_12795 PF06733 DEAD_2 AV942_12795 PF13307 Helicase C-terminal domain AV942_12820 PF00128 Alpha amylase, catalytic domain AV942_12845 PF07715 TonB-dependent Receptor Plug Domain AV942_12845 PF00593 TonB dependent receptor AV942_12855 PF08029 HisG, C-terminal domain AV942_12855 PF01634 ATP phosphoribosyltransferase AV942_12860 PF00815 Histidinol dehydrogenase AV942_12865 PF00155 Aminotransferase class I and II AV942_12870 PF00475 Imidazoleglycerol-phosphate dehydratase AV942_12875 PF00117 Glutamine amidotransferase class-I AV942_12880 PF00977 Histidine biosynthesis protein AV942_12885 PF00977 Histidine biosynthesis protein AV942_12890 PF01502 Phosphoribosyl-AMP cyclohydrolase AV942_12890 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AV942_12905 PF01226 Formate/nitrite transporter AV942_12910 PF00675 Insulinase (Peptidase family M16) AV942_12910 PF05193 Peptidase M16 inactive domain AV942_12915 PF10502 Signal peptidase, peptidase S26 AV942_12935 PF05191 Adenylate kinase, active site lid AV942_12940 PF00183 Hsp90 protein AV942_12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_12945 PF13662 Toprim domain AV942_12945 PF02132 RecR protein AV942_12960 PF02575 YbaB/EbfC DNA-binding family AV942_12965 PF12170 DNA polymerase III tau subunit V interacting with alpha AV942_12965 PF12169 DNA polymerase III subunits gamma and tau domain III AV942_12965 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AV942_12970 PF00156 Phosphoribosyl transferase domain AV942_12980 PF05114 Protein of unknown function (DUF692) AV942_12990 PF02687 FtsX-like permease family AV942_12990 PF12704 MacB-like periplasmic core domain AV942_12990 PF00005 ABC transporter AV942_13000 PF01590 GAF domain AV942_13000 PF00360 Phytochrome region AV942_13000 PF00563 EAL domain AV942_13000 PF00990 Diguanylate cyclase, GGDEF domain AV942_13025 PF01066 CDP-alcohol phosphatidyltransferase AV942_13045 PF09330 D-lactate dehydrogenase, membrane binding AV942_13045 PF01565 FAD binding domain AV942_13050 PF10431 C-terminal, D2-small domain, of ClpB protein AV942_13050 PF02861 Clp amino terminal domain, pathogenicity island component AV942_13050 PF00004 ATPase family associated with various cellular activities (AAA) AV942_13050 PF17871 AAA lid domain AV942_13050 PF07724 AAA domain (Cdc48 subfamily) AV942_13060 PF01479 S4 domain AV942_13060 PF00849 RNA pseudouridylate synthase AV942_13065 PF13525 Outer membrane lipoprotein AV942_13075 PF04545 Sigma-70, region 4 AV942_13075 PF04542 Sigma-70 region 2 AV942_13090 PF00106 short chain dehydrogenase AV942_13110 PF00691 OmpA family AV942_13110 PF13677 Membrane MotB of proton-channel complex MotA/MotB AV942_13115 PF01618 MotA/TolQ/ExbB proton channel family AV942_13120 PF02609 Exonuclease VII small subunit AV942_13125 PF00348 Polyprenyl synthetase AV942_13130 PF02780 Transketolase, C-terminal domain AV942_13130 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AV942_13130 PF02779 Transketolase, pyrimidine binding domain AV942_13135 PF04608 Phosphatidylglycerophosphatase A AV942_13140 PF00586 AIR synthase related protein, N-terminal domain AV942_13140 PF02769 AIR synthase related protein, C-terminal domain AV942_13145 PF01029 NusB family AV942_13150 PF00885 6,7-dimethyl-8-ribityllumazine synthase AV942_13155 PF00925 GTP cyclohydrolase II AV942_13155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AV942_13160 PF00677 Lumazine binding domain AV942_13165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AV942_13165 PF01872 RibD C-terminal domain AV942_13170 PF03477 ATP cone domain AV942_13175 PF00464 Serine hydroxymethyltransferase AV942_13185 PF12848 ABC transporter AV942_13185 PF00005 ABC transporter AV942_13195 PF18073 Rubredoxin metal binding domain AV942_13205 PF18429 Domain of unknown function (DUF5609) AV942_13215 PF01026 TatD related DNase AV942_13220 PF01243 Pyridoxamine 5'-phosphate oxidase AV942_13220 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AV942_13225 PF01926 50S ribosome-binding GTPase AV942_13225 PF07650 KH domain AV942_13230 PF00035 Double-stranded RNA binding motif AV942_13230 PF14622 Ribonuclease-III-like AV942_13235 PF10502 Signal peptidase, peptidase S26 AV942_13240 PF03144 Elongation factor Tu domain 2 AV942_13240 PF06421 GTP-binding protein LepA C-terminus AV942_13240 PF00679 Elongation factor G C-terminus AV942_13240 PF00009 Elongation factor Tu GTP binding domain AV942_13250 PF03888 MucB/RseB N-terminal domain AV942_13250 PF17188 MucB/RseB C-terminal domain AV942_13260 PF08281 Sigma-70, region 4 AV942_13260 PF04542 Sigma-70 region 2 AV942_13265 PF02910 Fumarate reductase flavoprotein C-term AV942_13265 PF00890 FAD binding domain AV942_13280 PF03937 Flavinator of succinate dehydrogenase AV942_13290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV942_13295 PF00543 Nitrogen regulatory protein P-II AV942_13300 PF02540 NAD synthase AV942_13335 PF00114 Pilin (bacterial filament) AV942_13335 PF07963 Prokaryotic N-terminal methylation motif AV942_13360 PF02401 LytB protein AV942_13365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV942_13370 PF01252 Signal peptidase (SPase) II AV942_13375 PF06827 Zinc finger found in FPG and IleRS AV942_13375 PF00133 tRNA synthetases class I (I, L, M and V) AV942_13375 PF08264 Anticodon-binding domain of tRNA AV942_13380 PF06574 FAD synthetase AV942_13380 PF01687 Riboflavin kinase AV942_13385 PF03023 Lipid II flippase MurJ AV942_13390 PF01649 Ribosomal protein S20 AV942_13395 PF00106 short chain dehydrogenase AV942_13410 PF01758 Sodium Bile acid symporter family AV942_13430 PF01546 Peptidase family M20/M25/M40 AV942_13430 PF07687 Peptidase dimerisation domain AV942_13435 PF13145 PPIC-type PPIASE domain AV942_13440 PF00216 Bacterial DNA-binding protein AV942_13450 PF05362 Lon protease (S16) C-terminal proteolytic domain AV942_13450 PF02190 ATP-dependent protease La (LON) substrate-binding domain AV942_13450 PF00004 ATPase family associated with various cellular activities (AAA) AV942_13455 PF07724 AAA domain (Cdc48 subfamily) AV942_13455 PF10431 C-terminal, D2-small domain, of ClpB protein AV942_13455 PF06689 ClpX C4-type zinc finger AV942_13460 PF00574 Clp protease AV942_13465 PF05697 Bacterial trigger factor protein (TF) AV942_13465 PF05698 Bacterial trigger factor protein (TF) C-terminus AV942_13465 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV942_13500 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AV942_13500 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AV942_13510 PF01980 tRNA-methyltransferase O AV942_13510 PF18389 TrmO C-terminal domain AV942_13515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AV942_13515 PF03129 Anticodon binding domain AV942_13520 PF00753 Metallo-beta-lactamase superfamily AV942_13520 PF12706 Beta-lactamase superfamily domain AV942_13525 PF02253 Phospholipase A1 AV942_13530 PF00850 Histone deacetylase domain AV942_13535 PF00672 HAMP domain AV942_13535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_13535 PF02743 Cache domain AV942_13540 PF00958 GMP synthase C terminal domain AV942_13540 PF02540 NAD synthase AV942_13540 PF00117 Glutamine amidotransferase class-I AV942_13545 PF00571 CBS domain AV942_13545 PF00478 IMP dehydrogenase / GMP reductase domain AV942_13550 PF02601 Exonuclease VII, large subunit AV942_13550 PF13742 OB-fold nucleic acid binding domain AV942_13565 PF01926 50S ribosome-binding GTPase AV942_13565 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AV942_13570 PF13360 PQQ-like domain AV942_13575 PF09976 Tetratricopeptide repeat-like domain AV942_13580 PF13393 Histidyl-tRNA synthetase AV942_13580 PF03129 Anticodon binding domain AV942_13585 PF04551 GcpE protein AV942_13590 PF13464 Domain of unknown function (DUF4115) AV942_13600 PF04055 Radical SAM superfamily AV942_13605 PF00334 Nucleoside diphosphate kinase AV942_13610 PF02657 Fe-S metabolism associated domain AV942_13615 PF01883 Iron-sulfur cluster assembly protein AV942_13620 PF01521 Iron-sulphur cluster biosynthesis AV942_13625 PF00266 Aminotransferase class-V AV942_13630 PF01458 Uncharacterized protein family (UPF0051) AV942_13635 PF00005 ABC transporter AV942_13640 PF01458 Uncharacterized protein family (UPF0051) AV942_13645 PF00266 Aminotransferase class-V AV942_13650 PF02082 Transcriptional regulator AV942_13655 PF00743 Flavin-binding monooxygenase-like AV942_13660 PF06426 Serine acetyltransferase, N-terminal AV942_13660 PF00132 Bacterial transferase hexapeptide (six repeats) AV942_13665 PF00588 SpoU rRNA Methylase family AV942_13670 PF00459 Inositol monophosphatase family AV942_13685 PF07549 SecD/SecF GG Motif AV942_13685 PF02355 Protein export membrane protein AV942_13690 PF02355 Protein export membrane protein AV942_13690 PF07549 SecD/SecF GG Motif AV942_13690 PF13721 SecD export protein N-terminal TM region AV942_13695 PF02699 Preprotein translocase subunit AV942_13700 PF01702 Queuine tRNA-ribosyltransferase AV942_13705 PF02547 Queuosine biosynthesis protein AV942_13720 PF04012 PspA/IM30 family AV942_13725 PF07885 Ion channel AV942_13740 PF06693 Protein of unknown function (DUF1190) AV942_13745 PF03738 Glutathionylspermidine synthase preATP-grasp AV942_13760 PF00005 ABC transporter AV942_13775 PF04960 Glutaminase AV942_13780 PF00245 Alkaline phosphatase AV942_13785 PF00072 Response regulator receiver domain AV942_13790 PF00463 Isocitrate lyase family AV942_13795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_13795 PF03466 LysR substrate binding domain AV942_13800 PF01274 Malate synthase AV942_13810 PF01370 NAD dependent epimerase/dehydratase family AV942_13840 PF13180 PDZ domain AV942_13840 PF17820 PDZ domain AV942_13860 PF00534 Glycosyl transferases group 1 AV942_13860 PF13439 Glycosyltransferase Family 4 AV942_13880 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AV942_13880 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AV942_13880 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AV942_13885 PF02350 UDP-N-acetylglucosamine 2-epimerase AV942_13915 PF01757 Acyltransferase family AV942_13920 PF13537 Glutamine amidotransferase domain AV942_13920 PF00733 Asparagine synthase AV942_13925 PF00534 Glycosyl transferases group 1 AV942_13925 PF00862 Sucrose synthase AV942_13935 PF01943 Polysaccharide biosynthesis protein AV942_13965 PF00733 Asparagine synthase AV942_13965 PF13537 Glutamine amidotransferase domain AV942_13980 PF01522 Polysaccharide deacetylase AV942_13985 PF02397 Bacterial sugar transferase AV942_14000 PF13614 AAA domain AV942_14010 PF01471 Putative peptidoglycan binding domain AV942_14010 PF13401 AAA domain AV942_14020 PF01541 GIY-YIG catalytic domain AV942_14030 PF03710 Glutamate-ammonia ligase adenylyltransferase AV942_14030 PF08335 GlnD PII-uridylyltransferase AV942_14040 PF03279 Bacterial lipid A biosynthesis acyltransferase AV942_14055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV942_14055 PF09317 Domain of unknown function (DUF1974) AV942_14055 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_14055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_14060 PF07715 TonB-dependent Receptor Plug Domain AV942_14060 PF04886 PT repeat AV942_14060 PF00593 TonB dependent receptor AV942_14070 PF03707 Bacterial signalling protein N terminal repeat AV942_14070 PF00990 Diguanylate cyclase, GGDEF domain AV942_14070 PF00563 EAL domain AV942_14070 PF13188 PAS domain AV942_14075 PF00265 Thymidine kinase AV942_14085 PF00356 Bacterial regulatory proteins, lacI family AV942_14120 PF01926 50S ribosome-binding GTPase AV942_14125 PF00588 SpoU rRNA Methylase family AV942_14125 PF08032 RNA 2'-O ribose methyltransferase substrate binding AV942_14130 PF00378 Enoyl-CoA hydratase/isomerase AV942_14130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AV942_14130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AV942_14145 PF00171 Aldehyde dehydrogenase family AV942_14150 PF00732 GMC oxidoreductase AV942_14150 PF05199 GMC oxidoreductase AV942_14165 PF05971 RNA methyltransferase AV942_14190 PF18158 Adaptive response protein AidB N-terminal domain AV942_14190 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_14190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_14220 PF00072 Response regulator receiver domain AV942_14220 PF00486 Transcriptional regulatory protein, C terminal AV942_14225 PF00512 His Kinase A (phospho-acceptor) domain AV942_14225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_14225 PF00672 HAMP domain AV942_14225 PF16527 Two-component sensor protein CpxA, periplasmic domain AV942_14235 PF03965 Penicillinase repressor AV942_14240 PF03544 Gram-negative bacterial TonB protein C-terminal AV942_14255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV942_14265 PF00111 2Fe-2S iron-sulfur cluster binding domain AV942_14265 PF01799 [2Fe-2S] binding domain AV942_14270 PF00941 FAD binding domain in molybdopterin dehydrogenase AV942_14270 PF03450 CO dehydrogenase flavoprotein C-terminal domain AV942_14275 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AV942_14275 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AV942_14300 PF00106 short chain dehydrogenase AV942_14305 PF01965 DJ-1/PfpI family AV942_14310 PF03631 Virulence factor BrkB AV942_14320 PF07152 YaeQ protein AV942_14350 PF07690 Major Facilitator Superfamily AV942_14365 PF09382 RQC domain AV942_14365 PF16124 RecQ zinc-binding AV942_14365 PF00570 HRDC domain AV942_14365 PF00271 Helicase conserved C-terminal domain AV942_14365 PF00270 DEAD/DEAH box helicase AV942_14385 PF00672 HAMP domain AV942_14385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV942_14385 PF00072 Response regulator receiver domain AV942_14385 PF00512 His Kinase A (phospho-acceptor) domain AV942_14385 PF01627 Hpt domain AV942_14385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_14395 PF01590 GAF domain AV942_14395 PF00512 His Kinase A (phospho-acceptor) domain AV942_14395 PF08446 PAS fold AV942_14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_14395 PF00360 Phytochrome region AV942_14400 PF07995 Glucose / Sorbosone dehydrogenase AV942_14405 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH AV942_14415 PF00072 Response regulator receiver domain AV942_14415 PF00486 Transcriptional regulatory protein, C terminal AV942_14420 PF11808 Phosphate regulon sensor protein PhoR AV942_14420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_14420 PF00512 His Kinase A (phospho-acceptor) domain AV942_14420 PF00989 PAS fold AV942_14435 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AV942_14435 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AV942_14440 PF01272 Transcription elongation factor, GreA/GreB, C-term AV942_14440 PF14760 Rnk N-terminus AV942_14450 PF02599 Global regulator protein family AV942_14455 PF01145 SPFH domain / Band 7 family AV942_14475 PF07724 AAA domain (Cdc48 subfamily) AV942_14475 PF10431 C-terminal, D2-small domain, of ClpB protein AV942_14500 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_14500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV942_14500 PF00403 Heavy-metal-associated domain AV942_14505 PF00403 Heavy-metal-associated domain AV942_14515 PF13411 MerR HTH family regulatory protein AV942_14545 PF07715 TonB-dependent Receptor Plug Domain AV942_14545 PF00593 TonB dependent receptor AV942_14545 PF07660 Secretin and TonB N terminus short domain AV942_14550 PF00873 AcrB/AcrD/AcrF family AV942_14570 PF16916 Dimerisation domain of Zinc Transporter AV942_14570 PF01545 Cation efflux family AV942_14585 PF00384 Molybdopterin oxidoreductase AV942_14585 PF01568 Molydopterin dinucleotide binding domain AV942_14590 PF13005 zinc-finger binding domain of transposase IS66 AV942_14590 PF13007 Transposase C of IS166 homeodomain AV942_14590 PF13817 IS66 C-terminal element AV942_14590 PF03050 Transposase IS66 family AV942_14605 PF00175 Oxidoreductase NAD-binding domain AV942_14605 PF00970 Oxidoreductase FAD-binding domain AV942_14605 PF00042 Globin AV942_14610 PF01590 GAF domain AV942_14610 PF00158 Sigma-54 interaction domain AV942_14630 PF01597 Glycine cleavage H-protein AV942_14635 PF08669 Glycine cleavage T-protein C-terminal barrel domain AV942_14635 PF01571 Aminomethyltransferase folate-binding domain AV942_14640 PF01979 Amidohydrolase family AV942_14645 PF01869 BadF/BadG/BcrA/BcrD ATPase family AV942_14650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_14650 PF03466 LysR substrate binding domain AV942_14655 PF02652 L-lactate permease AV942_14665 PF01321 Creatinase/Prolidase N-terminal domain AV942_14665 PF00557 Metallopeptidase family M24 AV942_14675 PF01494 FAD binding domain AV942_14680 PF01494 FAD binding domain AV942_14685 PF00557 Metallopeptidase family M24 AV942_14685 PF05195 Aminopeptidase P, N-terminal domain AV942_14690 PF03695 Uncharacterised protein family (UPF0149) AV942_14700 PF00294 pfkB family carbohydrate kinase AV942_14705 PF01156 Inosine-uridine preferring nucleoside hydrolase AV942_14710 PF00512 His Kinase A (phospho-acceptor) domain AV942_14710 PF00989 PAS fold AV942_14710 PF00072 Response regulator receiver domain AV942_14710 PF00497 Bacterial extracellular solute-binding proteins, family 3 AV942_14710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_14710 PF01627 Hpt domain AV942_14715 PF01812 5-formyltetrahydrofolate cyclo-ligase family AV942_14720 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AV942_14725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV942_14725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV942_14725 PF01842 ACT domain AV942_14745 PF06945 Protein of unknown function (DUF1289) AV942_14755 PF00873 AcrB/AcrD/AcrF family AV942_14760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AV942_14765 PF03466 LysR substrate binding domain AV942_14765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_14780 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_14780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV942_14785 PF02817 e3 binding domain AV942_14785 PF00364 Biotin-requiring enzyme AV942_14785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AV942_14790 PF17831 Pyruvate dehydrogenase E1 component middle domain AV942_14790 PF00456 Transketolase, thiamine diphosphate binding domain AV942_14795 PF07729 FCD domain AV942_14795 PF00392 Bacterial regulatory proteins, gntR family AV942_14805 PF01510 N-acetylmuramoyl-L-alanine amidase AV942_14815 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AV942_14815 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AV942_14825 PF00482 Type II secretion system (T2SS), protein F AV942_14830 PF01478 Type IV leader peptidase family AV942_14830 PF06750 Bacterial Peptidase A24 N-terminal domain AV942_14835 PF01121 Dephospho-CoA kinase AV942_14840 PF07072 Cell division protein AV942_14850 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AV942_14855 PF00293 NUDIX domain AV942_14860 PF07517 SecA DEAD-like domain AV942_14860 PF02810 SEC-C motif AV942_14860 PF01043 SecA preprotein cross-linking domain AV942_14860 PF07516 SecA Wing and Scaffold domain AV942_14865 PF01476 LysM domain AV942_14865 PF08525 Opacity-associated protein A N-terminal motif AV942_14865 PF01551 Peptidase family M23 AV942_14870 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AV942_14875 PF12327 FtsZ family, C-terminal domain AV942_14875 PF00091 Tubulin/FtsZ family, GTPase domain AV942_14880 PF02491 SHS2 domain inserted in FTSA AV942_14885 PF08478 POTRA domain, FtsQ-type AV942_14885 PF03799 Cell division protein FtsQ AV942_14890 PF07478 D-ala D-ala ligase C-terminus AV942_14890 PF01820 D-ala D-ala ligase N-terminus AV942_14895 PF01225 Mur ligase family, catalytic domain AV942_14895 PF02875 Mur ligase family, glutamate ligase domain AV942_14895 PF08245 Mur ligase middle domain AV942_14900 PF03033 Glycosyltransferase family 28 N-terminal domain AV942_14900 PF04101 Glycosyltransferase family 28 C-terminal domain AV942_14905 PF01098 Cell cycle protein AV942_14910 PF02875 Mur ligase family, glutamate ligase domain AV942_14910 PF08245 Mur ligase middle domain AV942_14915 PF00953 Glycosyl transferase family 4 AV942_14915 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AV942_14920 PF02875 Mur ligase family, glutamate ligase domain AV942_14920 PF01225 Mur ligase family, catalytic domain AV942_14920 PF08245 Mur ligase middle domain AV942_14925 PF02875 Mur ligase family, glutamate ligase domain AV942_14925 PF01225 Mur ligase family, catalytic domain AV942_14925 PF08245 Mur ligase middle domain AV942_14930 PF03717 Penicillin-binding Protein dimerisation domain AV942_14930 PF00905 Penicillin binding protein transpeptidase domain AV942_14935 PF04999 Cell division protein FtsL AV942_14940 PF01795 MraW methylase family AV942_14945 PF02381 MraZ protein, putative antitoxin-like AV942_14985 PF08534 Redoxin AV942_14985 PF00462 Glutaredoxin AV942_14990 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AV942_15000 PF17158 Membrane-associated sensor, integral membrane domain AV942_15000 PF00990 Diguanylate cyclase, GGDEF domain AV942_15010 PF00158 Sigma-54 interaction domain AV942_15010 PF00072 Response regulator receiver domain AV942_15010 PF02954 Bacterial regulatory protein, Fis family AV942_15015 PF09456 RcsC Alpha-Beta-Loop (ABL) AV942_15015 PF00072 Response regulator receiver domain AV942_15015 PF00512 His Kinase A (phospho-acceptor) domain AV942_15015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_15020 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AV942_15020 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AV942_15040 PF00924 Mechanosensitive ion channel AV942_15040 PF05552 Conserved TM helix AV942_15045 PF04452 RNA methyltransferase AV942_15050 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AV942_15050 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AV942_15055 PF02622 Uncharacterized ACR, COG1678 AV942_15060 PF03652 Holliday junction resolvase AV942_15070 PF00437 Type II/IV secretion system protein AV942_15075 PF00437 Type II/IV secretion system protein AV942_15080 PF01168 Alanine racemase, N-terminal domain AV942_15085 PF14748 Pyrroline-5-carboxylate reductase dimerisation AV942_15085 PF03807 NADP oxidoreductase coenzyme F420-dependent AV942_15090 PF02325 YGGT family AV942_15100 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_15100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV942_15115 PF02798 Glutathione S-transferase, N-terminal domain AV942_15115 PF14834 Glutathione S-transferase, C-terminal domain AV942_15120 PF00080 Copper/zinc superoxide dismutase (SODC) AV942_15125 PF02566 OsmC-like protein AV942_15130 PF01625 Peptide methionine sulfoxide reductase AV942_15145 PF03591 AzlC protein AV942_15155 PF07690 Major Facilitator Superfamily AV942_15160 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) AV942_15165 PF03883 Peroxide stress protein YaaA AV942_15175 PF00923 Transaldolase/Fructose-6-phosphate aldolase AV942_15180 PF00342 Phosphoglucose isomerase AV942_15185 PF03167 Uracil DNA glycosylase superfamily AV942_15190 PF00291 Pyridoxal-phosphate dependent enzyme AV942_15190 PF14821 Threonine synthase N terminus AV942_15195 PF08544 GHMP kinases C terminal AV942_15195 PF00288 GHMP kinases N terminal domain AV942_15200 PF00742 Homoserine dehydrogenase AV942_15200 PF01842 ACT domain AV942_15200 PF00696 Amino acid kinase family AV942_15200 PF03447 Homoserine dehydrogenase, NAD binding domain AV942_15200 PF13840 ACT domain AV942_15205 PF17755 UvrA DNA-binding domain AV942_15210 PF03466 LysR substrate binding domain AV942_15210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_15215 PF00107 Zinc-binding dehydrogenase AV942_15215 PF08240 Alcohol dehydrogenase GroES-like domain AV942_15225 PF01022 Bacterial regulatory protein, arsR family AV942_15235 PF03358 NADPH-dependent FMN reductase AV942_15240 PF01758 Sodium Bile acid symporter family AV942_15245 PF01339 CheB methylesterase AV942_15245 PF00072 Response regulator receiver domain AV942_15250 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AV942_15255 PF00486 Transcriptional regulatory protein, C terminal AV942_15255 PF00072 Response regulator receiver domain AV942_15260 PF00512 His Kinase A (phospho-acceptor) domain AV942_15260 PF00672 HAMP domain AV942_15260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_15285 PF00962 Adenosine/AMP deaminase AV942_15290 PF04116 Fatty acid hydroxylase superfamily AV942_15310 PF16653 Saccharopine dehydrogenase C-terminal domain AV942_15310 PF03435 Saccharopine dehydrogenase NADP binding domain AV942_15315 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AV942_15325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AV942_15330 PF04348 LppC putative lipoprotein AV942_15335 PF02021 Uncharacterised protein family UPF0102 AV942_15340 PF00534 Glycosyl transferases group 1 AV942_15345 PF13580 SIS domain AV942_15350 PF04972 BON domain AV942_15355 PF07690 Major Facilitator Superfamily AV942_15365 PF00893 Small Multidrug Resistance protein AV942_15370 PF07730 Histidine kinase AV942_15375 PF00072 Response regulator receiver domain AV942_15375 PF00196 Bacterial regulatory proteins, luxR family AV942_15390 PF07715 TonB-dependent Receptor Plug Domain AV942_15390 PF00593 TonB dependent receptor AV942_15405 PF00285 Citrate synthase, C-terminal domain AV942_15410 PF00330 Aconitase family (aconitate hydratase) AV942_15410 PF00694 Aconitase C-terminal domain AV942_15415 PF04303 PrpF protein AV942_15420 PF00990 Diguanylate cyclase, GGDEF domain AV942_15425 PF00480 ROK family AV942_15430 PF13660 Domain of unknown function (DUF4147) AV942_15430 PF05161 MOFRL family AV942_15435 PF00474 Sodium:solute symporter family AV942_15440 PF07715 TonB-dependent Receptor Plug Domain AV942_15440 PF00593 TonB dependent receptor AV942_15465 PF00512 His Kinase A (phospho-acceptor) domain AV942_15465 PF00072 Response regulator receiver domain AV942_15465 PF18415 Histidine kinase receptor ArcB trans-membrane domain AV942_15465 PF01627 Hpt domain AV942_15465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_15465 PF00989 PAS fold AV942_15470 PF01510 N-acetylmuramoyl-L-alanine amidase AV942_15475 PF01645 Conserved region in glutamate synthase AV942_15475 PF04898 Glutamate synthase central domain AV942_15475 PF01493 GXGXG motif AV942_15475 PF00310 Glutamine amidotransferases class-II AV942_15480 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AV942_15480 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_15495 PF01048 Phosphorylase superfamily AV942_15500 PF03186 CobD/Cbib protein AV942_15505 PF01497 Periplasmic binding protein AV942_15510 PF00581 Rhodanese-like domain AV942_15525 PF01266 FAD dependent oxidoreductase AV942_15530 PF00579 tRNA synthetases class I (W and Y) AV942_15535 PF01551 Peptidase family M23 AV942_15535 PF01476 LysM domain AV942_15540 PF03702 Anhydro-N-acetylmuramic acid kinase AV942_15545 PF07690 Major Facilitator Superfamily AV942_15555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AV942_15565 PF01053 Cys/Met metabolism PLP-dependent enzyme AV942_15570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV942_15570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV942_15575 PF00043 Glutathione S-transferase, C-terminal domain AV942_15575 PF02798 Glutathione S-transferase, N-terminal domain AV942_15580 PF01521 Iron-sulphur cluster biosynthesis AV942_15590 PF03976 Polyphosphate kinase 2 (PPK2) AV942_15595 PF03776 Septum formation topological specificity factor MinE AV942_15600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AV942_15605 PF05209 Septum formation inhibitor MinC, N-terminal domain AV942_15605 PF03775 Septum formation inhibitor MinC, C-terminal domain AV942_15610 PF10415 Fumarase C C-terminus AV942_15610 PF00206 Lyase AV942_15615 PF00127 Copper binding proteins, plastocyanin/azurin family AV942_15645 PF01566 Natural resistance-associated macrophage protein AV942_15650 PF00155 Aminotransferase class I and II AV942_15655 PF00512 His Kinase A (phospho-acceptor) domain AV942_15655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_15655 PF13188 PAS domain AV942_15655 PF00072 Response regulator receiver domain AV942_15655 PF08448 PAS fold AV942_15665 PF00120 Glutamine synthetase, catalytic domain AV942_15665 PF03951 Glutamine synthetase, beta-Grasp domain AV942_15675 PF00512 His Kinase A (phospho-acceptor) domain AV942_15675 PF00989 PAS fold AV942_15675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_15680 PF02954 Bacterial regulatory protein, Fis family AV942_15680 PF00072 Response regulator receiver domain AV942_15680 PF00158 Sigma-54 interaction domain AV942_15685 PF00072 Response regulator receiver domain AV942_15690 PF01553 Acyltransferase AV942_15695 PF06877 Regulator of ribonuclease activity B AV942_15710 PF08447 PAS fold AV942_15710 PF13426 PAS domain AV942_15710 PF07536 HWE histidine kinase AV942_15730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_15730 PF00072 Response regulator receiver domain AV942_15730 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AV942_15730 PF00672 HAMP domain AV942_15730 PF01627 Hpt domain AV942_15730 PF00512 His Kinase A (phospho-acceptor) domain AV942_15735 PF00133 tRNA synthetases class I (I, L, M and V) AV942_15735 PF10458 Valyl tRNA synthetase tRNA binding arm AV942_15735 PF08264 Anticodon-binding domain of tRNA AV942_15740 PF04364 DNA polymerase III chi subunit, HolC AV942_15745 PF00883 Cytosol aminopeptidase family, catalytic domain AV942_15745 PF02789 Cytosol aminopeptidase family, N-terminal domain AV942_15750 PF03739 Lipopolysaccharide export system permease LptF/LptG AV942_15755 PF03739 Lipopolysaccharide export system permease LptF/LptG AV942_15770 PF04545 Sigma-70, region 4 AV942_15770 PF04542 Sigma-70 region 2 AV942_15820 PF01751 Toprim domain AV942_15820 PF01396 Topoisomerase DNA binding C4 zinc finger AV942_15820 PF01131 DNA topoisomerase AV942_15850 PF00589 Phage integrase family AV942_15850 PF02899 Phage integrase, N-terminal SAM-like domain AV942_15865 PF06114 IrrE N-terminal-like domain AV942_15945 PF00392 Bacterial regulatory proteins, gntR family AV942_15945 PF07729 FCD domain AV942_15955 PF16355 Domain of unknown function (DUF4982) AV942_15955 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AV942_15955 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AV942_15955 PF00703 Glycosyl hydrolases family 2 AV942_15955 PF02837 Glycosyl hydrolases family 2, sugar binding domain AV942_15965 PF13378 Enolase C-terminal domain-like AV942_15965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AV942_15970 PF03648 Glycosyl hydrolase family 67 N-terminus AV942_15970 PF07488 Glycosyl hydrolase family 67 middle domain AV942_15970 PF07477 Glycosyl hydrolase family 67 C-terminus AV942_15975 PF04616 Glycosyl hydrolases family 43 AV942_15975 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AV942_15985 PF00990 Diguanylate cyclase, GGDEF domain AV942_15985 PF13185 GAF domain AV942_16015 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AV942_16015 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AV942_16020 PF00072 Response regulator receiver domain AV942_16020 PF00486 Transcriptional regulatory protein, C terminal AV942_16025 PF01594 AI-2E family transporter AV942_16040 PF00005 ABC transporter AV942_16045 PF01032 FecCD transport family AV942_16050 PF01497 Periplasmic binding protein AV942_16060 PF07715 TonB-dependent Receptor Plug Domain AV942_16060 PF00593 TonB dependent receptor AV942_16070 PF00230 Major intrinsic protein AV942_16075 PF00892 EamA-like transporter family AV942_16090 PF07715 TonB-dependent Receptor Plug Domain AV942_16090 PF00593 TonB dependent receptor AV942_16100 PF02659 Putative manganese efflux pump AV942_16110 PF10996 Beta-Casp domain AV942_16110 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AV942_16110 PF00753 Metallo-beta-lactamase superfamily AV942_16115 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AV942_16120 PF00557 Metallopeptidase family M24 AV942_16120 PF01321 Creatinase/Prolidase N-terminal domain AV942_16125 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AV942_16125 PF05221 S-adenosyl-L-homocysteine hydrolase AV942_16135 PF03547 Membrane transport protein AV942_16140 PF13360 PQQ-like domain AV942_16140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AV942_16165 PF00005 ABC transporter AV942_16175 PF00883 Cytosol aminopeptidase family, catalytic domain AV942_16175 PF02789 Cytosol aminopeptidase family, N-terminal domain AV942_16180 PF12706 Beta-lactamase superfamily domain AV942_16185 PF03070 TENA/THI-4/PQQC family AV942_16190 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AV942_16195 PF04055 Radical SAM superfamily AV942_16195 PF13186 Iron-sulfur cluster-binding domain AV942_16220 PF00196 Bacterial regulatory proteins, luxR family AV942_16220 PF00072 Response regulator receiver domain AV942_16225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_16225 PF00512 His Kinase A (phospho-acceptor) domain AV942_16235 PF04205 FMN-binding domain AV942_16235 PF12801 4Fe-4S binding domain AV942_16240 PF00171 Aldehyde dehydrogenase family AV942_16245 PF00072 Response regulator receiver domain AV942_16245 PF00196 Bacterial regulatory proteins, luxR family AV942_16250 PF07730 Histidine kinase AV942_16250 PF05231 MASE1 AV942_16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_16255 PF03466 LysR substrate binding domain AV942_16255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_16260 PF00171 Aldehyde dehydrogenase family AV942_16265 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AV942_16265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AV942_16270 PF02028 BCCT, betaine/carnitine/choline family transporter AV942_16285 PF00593 TonB dependent receptor AV942_16285 PF07715 TonB-dependent Receptor Plug Domain AV942_16290 PF16656 Purple acid Phosphatase, N-terminal domain AV942_16290 PF00149 Calcineurin-like phosphoesterase AV942_16295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_16295 PF03466 LysR substrate binding domain AV942_16300 PF01070 FMN-dependent dehydrogenase AV942_16305 PF01565 FAD binding domain AV942_16305 PF09330 D-lactate dehydrogenase, membrane binding AV942_16310 PF00196 Bacterial regulatory proteins, luxR family AV942_16315 PF03783 Curli production assembly/transport component CsgG AV942_16340 PF00082 Subtilase family AV942_16345 PF00072 Response regulator receiver domain AV942_16345 PF00196 Bacterial regulatory proteins, luxR family AV942_16360 PF00271 Helicase conserved C-terminal domain AV942_16360 PF00270 DEAD/DEAH box helicase AV942_16365 PF02322 Cytochrome bd terminal oxidase subunit II AV942_16370 PF01654 Cytochrome bd terminal oxidase subunit I AV942_16390 PF00871 Acetokinase family AV942_16400 PF00067 Cytochrome P450 AV942_16410 PF00462 Glutaredoxin AV942_16420 PF00990 Diguanylate cyclase, GGDEF domain AV942_16465 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AV942_16480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV942_16480 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_16495 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV942_16525 PF07729 FCD domain AV942_16525 PF00392 Bacterial regulatory proteins, gntR family AV942_16530 PF12794 Mechanosensitive ion channel inner membrane domain 1 AV942_16530 PF12795 Mechanosensitive ion channel porin domain AV942_16530 PF00924 Mechanosensitive ion channel AV942_16540 PF00141 Peroxidase AV942_16560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_16560 PF03466 LysR substrate binding domain AV942_16570 PF01925 Sulfite exporter TauE/SafE AV942_16580 PF08769 Sporulation initiation factor Spo0A C terminal AV942_16580 PF00072 Response regulator receiver domain AV942_16590 PF00512 His Kinase A (phospho-acceptor) domain AV942_16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_16600 PF00136 DNA polymerase family B AV942_16600 PF03104 DNA polymerase family B, exonuclease domain AV942_16610 PF13193 AMP-binding enzyme C-terminal domain AV942_16610 PF00501 AMP-binding enzyme AV942_16640 PF05958 tRNA (Uracil-5-)-methyltransferase AV942_16645 PF00440 Bacterial regulatory proteins, tetR family AV942_16655 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_16655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV942_16665 PF03167 Uracil DNA glycosylase superfamily AV942_16670 PF00563 EAL domain AV942_16670 PF00990 Diguanylate cyclase, GGDEF domain AV942_16670 PF03707 Bacterial signalling protein N terminal repeat AV942_16680 PF01507 Phosphoadenosine phosphosulfate reductase family AV942_16685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AV942_16685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AV942_16690 PF00175 Oxidoreductase NAD-binding domain AV942_16690 PF00667 FAD binding domain AV942_16690 PF00258 Flavodoxin AV942_16710 PF04024 PspC domain AV942_16715 PF04012 PspA/IM30 family AV942_16725 PF01207 Dihydrouridine synthase (Dus) AV942_16745 PF01389 OmpA-like transmembrane domain AV942_16745 PF00691 OmpA family AV942_16750 PF02190 ATP-dependent protease La (LON) substrate-binding domain AV942_16750 PF00004 ATPase family associated with various cellular activities (AAA) AV942_16750 PF05362 Lon protease (S16) C-terminal proteolytic domain AV942_16755 PF03707 Bacterial signalling protein N terminal repeat AV942_16755 PF00990 Diguanylate cyclase, GGDEF domain AV942_16755 PF00563 EAL domain AV942_16760 PF00756 Putative esterase AV942_16765 PF01553 Acyltransferase AV942_16770 PF01553 Acyltransferase AV942_16775 PF00924 Mechanosensitive ion channel AV942_16790 PF01370 NAD dependent epimerase/dehydratase family AV942_16795 PF00209 Sodium:neurotransmitter symporter family AV942_16800 PF00106 short chain dehydrogenase AV942_16810 PF01625 Peptide methionine sulfoxide reductase AV942_16825 PF00258 Flavodoxin AV942_16835 PF02472 Biopolymer transport protein ExbD/TolR AV942_16850 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AV942_16850 PF13181 Tetratricopeptide repeat AV942_16855 PF01270 Glycosyl hydrolases family 8 AV942_16865 PF03552 Cellulose synthase AV942_16865 PF00535 Glycosyl transferase family 2 AV942_16865 PF07238 PilZ domain AV942_16880 PF05175 Methyltransferase small domain AV942_16885 PF13460 NAD(P)H-binding AV942_16890 PF00326 Prolyl oligopeptidase family AV942_16890 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AV942_16895 PF08000 Bacterial PH domain AV942_16900 PF00990 Diguanylate cyclase, GGDEF domain AV942_16900 PF00563 EAL domain AV942_16900 PF08448 PAS fold AV942_16910 PF00291 Pyridoxal-phosphate dependent enzyme AV942_16915 PF07969 Amidohydrolase family AV942_16925 PF00753 Metallo-beta-lactamase superfamily AV942_16935 PF03466 LysR substrate binding domain AV942_16935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_16940 PF13230 Glutamine amidotransferases class-II AV942_16945 PF05360 yiaA/B two helix domain AV942_16965 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AV942_16970 PF07715 TonB-dependent Receptor Plug Domain AV942_16970 PF00593 TonB dependent receptor AV942_16975 PF00171 Aldehyde dehydrogenase family AV942_16980 PF01613 Flavin reductase like domain AV942_16985 PF00881 Nitroreductase family AV942_16990 PF00561 alpha/beta hydrolase fold AV942_16995 PF01042 Endoribonuclease L-PSP AV942_17000 PF00857 Isochorismatase family AV942_17005 PF00296 Luciferase-like monooxygenase AV942_17010 PF00440 Bacterial regulatory proteins, tetR family AV942_17010 PF08362 YcdC-like protein, C-terminal region AV942_17025 PF09905 DNA-binding protein VF530 AV942_17030 PF00753 Metallo-beta-lactamase superfamily AV942_17030 PF16123 Hydroxyacylglutathione hydrolase C-terminus AV942_17040 PF11798 IMS family HHH motif AV942_17040 PF00817 impB/mucB/samB family AV942_17040 PF11799 impB/mucB/samB family C-terminal domain AV942_17050 PF02424 ApbE family AV942_17055 PF00175 Oxidoreductase NAD-binding domain AV942_17055 PF00111 2Fe-2S iron-sulfur cluster binding domain AV942_17055 PF00970 Oxidoreductase FAD-binding domain AV942_17060 PF02508 Rnf-Nqr subunit, membrane protein AV942_17065 PF02508 Rnf-Nqr subunit, membrane protein AV942_17070 PF04205 FMN-binding domain AV942_17075 PF03116 NQR2, RnfD, RnfE family AV942_17080 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AV942_17080 PF11973 NQRA C-terminal domain AV942_17085 PF07055 Enoyl reductase FAD binding domain AV942_17085 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AV942_17085 PF12241 Trans-2-enoyl-CoA reductase catalytic region AV942_17090 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AV942_17090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV942_17095 PF00311 Phosphoenolpyruvate carboxylase AV942_17100 PF00141 Peroxidase AV942_17105 PF00141 Peroxidase AV942_17115 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AV942_17115 PF00056 lactate/malate dehydrogenase, NAD binding domain AV942_17120 PF01316 Arginine repressor, DNA binding domain AV942_17120 PF02863 Arginine repressor, C-terminal domain AV942_17145 PF00485 Phosphoribulokinase / Uridine kinase family AV942_17150 PF07670 Nucleoside recognition AV942_17150 PF07662 Na+ dependent nucleoside transporter C-terminus AV942_17150 PF01773 Na+ dependent nucleoside transporter N-terminus AV942_17170 PF00072 Response regulator receiver domain AV942_17170 PF00990 Diguanylate cyclase, GGDEF domain AV942_17175 PF07733 Bacterial DNA polymerase III alpha NTPase domain AV942_17175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AV942_17175 PF02811 PHP domain AV942_17175 PF14579 Helix-hairpin-helix motif AV942_17175 PF00929 Exonuclease AV942_17180 PF00005 ABC transporter AV942_17180 PF00571 CBS domain AV942_17185 PF00474 Sodium:solute symporter family AV942_17195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_17195 PF07689 KaiB domain AV942_17195 PF00512 His Kinase A (phospho-acceptor) domain AV942_17205 PF18030 RimK PreATP-grasp domain AV942_17205 PF08443 RimK-like ATP-grasp domain AV942_17215 PF18030 RimK PreATP-grasp domain AV942_17215 PF08443 RimK-like ATP-grasp domain AV942_17225 PF00196 Bacterial regulatory proteins, luxR family AV942_17225 PF00072 Response regulator receiver domain AV942_17240 PF02690 Na+/Pi-cotransporter AV942_17245 PF00248 Aldo/keto reductase family AV942_17265 PF08448 PAS fold AV942_17265 PF00563 EAL domain AV942_17265 PF08447 PAS fold AV942_17265 PF00990 Diguanylate cyclase, GGDEF domain AV942_17270 PF00009 Elongation factor Tu GTP binding domain AV942_17270 PF03144 Elongation factor Tu domain 2 AV942_17270 PF03143 Elongation factor Tu C-terminal domain AV942_17295 PF03309 Type III pantothenate kinase AV942_17300 PF02237 Biotin protein ligase C terminal domain AV942_17300 PF03099 Biotin/lipoate A/B protein ligase family AV942_17300 PF08279 HTH domain AV942_17305 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AV942_17305 PF01565 FAD binding domain AV942_17310 PF08447 PAS fold AV942_17310 PF13426 PAS domain AV942_17310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_17345 PF00664 ABC transporter transmembrane region AV942_17345 PF00005 ABC transporter AV942_17345 PF03412 Peptidase C39 family AV942_17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_17350 PF03466 LysR substrate binding domain AV942_17365 PF00483 Nucleotidyl transferase AV942_17365 PF01050 Mannose-6-phosphate isomerase AV942_17370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AV942_17370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AV942_17370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AV942_17375 PF00535 Glycosyl transferase family 2 AV942_17380 PF16363 GDP-mannose 4,6 dehydratase AV942_17385 PF04321 RmlD substrate binding domain AV942_17390 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AV942_17395 PF00483 Nucleotidyl transferase AV942_17415 PF13181 Tetratricopeptide repeat AV942_17450 PF00535 Glycosyl transferase family 2 AV942_17550 PF13005 zinc-finger binding domain of transposase IS66 AV942_17550 PF03050 Transposase IS66 family AV942_17550 PF13007 Transposase C of IS166 homeodomain AV942_17550 PF13817 IS66 C-terminal element AV942_17590 PF00700 Bacterial flagellin C-terminal helical region AV942_17590 PF00669 Bacterial flagellin N-terminal helical region AV942_17600 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AV942_17605 PF01196 Ribosomal protein L17 AV942_17610 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AV942_17610 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AV942_17610 PF01000 RNA polymerase Rpb3/RpoA insert domain AV942_17615 PF00163 Ribosomal protein S4/S9 N-terminal domain AV942_17615 PF01479 S4 domain AV942_17620 PF00411 Ribosomal protein S11 AV942_17625 PF00416 Ribosomal protein S13/S18 AV942_17630 PF00444 Ribosomal protein L36 AV942_17635 PF00344 SecY translocase AV942_17640 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AV942_17645 PF00327 Ribosomal protein L30p/L7e AV942_17650 PF03719 Ribosomal protein S5, C-terminal domain AV942_17650 PF00333 Ribosomal protein S5, N-terminal domain AV942_17655 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AV942_17660 PF00347 Ribosomal protein L6 AV942_17665 PF00410 Ribosomal protein S8 AV942_17670 PF00253 Ribosomal protein S14p/S29e AV942_17675 PF00281 Ribosomal protein L5 AV942_17675 PF00673 ribosomal L5P family C-terminus AV942_17680 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AV942_17680 PF00467 KOW motif AV942_17685 PF00238 Ribosomal protein L14p/L23e AV942_17690 PF00072 Response regulator receiver domain AV942_17690 PF00512 His Kinase A (phospho-acceptor) domain AV942_17690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_17690 PF09308 LuxQ, periplasmic AV942_17710 PF00588 SpoU rRNA Methylase family AV942_17710 PF08032 RNA 2'-O ribose methyltransferase substrate binding AV942_17715 PF17876 Cold shock domain AV942_17715 PF08461 Ribonuclease R winged-helix domain AV942_17715 PF08206 Ribonuclease B OB domain AV942_17715 PF00773 RNB domain AV942_17715 PF00575 S1 RNA binding domain AV942_17730 PF16655 PhoD-like phosphatase, N-terminal domain AV942_17730 PF09423 PhoD-like phosphatase AV942_17760 PF08238 Sel1 repeat AV942_17770 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AV942_17775 PF00970 Oxidoreductase FAD-binding domain AV942_17775 PF00175 Oxidoreductase NAD-binding domain AV942_17790 PF04389 Peptidase family M28 AV942_17800 PF00360 Phytochrome region AV942_17800 PF08446 PAS fold AV942_17800 PF00512 His Kinase A (phospho-acceptor) domain AV942_17800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_17800 PF01590 GAF domain AV942_17810 PF01654 Cytochrome bd terminal oxidase subunit I AV942_17815 PF02322 Cytochrome bd terminal oxidase subunit II AV942_17820 PF01037 Lrp/AsnC ligand binding domain AV942_17820 PF13404 AsnC-type helix-turn-helix domain AV942_17830 PF00313 'Cold-shock' DNA-binding domain AV942_17835 PF03109 ABC1 family AV942_17845 PF01209 ubiE/COQ5 methyltransferase family AV942_17855 PF01432 Peptidase family M3 AV942_17860 PF00072 Response regulator receiver domain AV942_17870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_17870 PF00989 PAS fold AV942_17870 PF00512 His Kinase A (phospho-acceptor) domain AV942_17875 PF00158 Sigma-54 interaction domain AV942_17875 PF00072 Response regulator receiver domain AV942_17875 PF02954 Bacterial regulatory protein, Fis family AV942_17880 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_17880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AV942_17885 PF01568 Molydopterin dinucleotide binding domain AV942_17885 PF00384 Molybdopterin oxidoreductase AV942_17885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AV942_17890 PF00326 Prolyl oligopeptidase family AV942_17890 PF07676 WD40-like Beta Propeller Repeat AV942_17940 PF00005 ABC transporter AV942_17940 PF03412 Peptidase C39 family AV942_17940 PF00664 ABC transporter transmembrane region AV942_17945 PF00196 Bacterial regulatory proteins, luxR family AV942_17945 PF00072 Response regulator receiver domain AV942_17955 PF08443 RimK-like ATP-grasp domain AV942_17955 PF18030 RimK PreATP-grasp domain AV942_17965 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system AV942_17970 PF00004 ATPase family associated with various cellular activities (AAA) AV942_17970 PF07724 AAA domain (Cdc48 subfamily) AV942_17975 PF00227 Proteasome subunit AV942_17980 PF05036 Sporulation related domain AV942_17985 PF00270 DEAD/DEAH box helicase AV942_17985 PF00271 Helicase conserved C-terminal domain AV942_17985 PF17764 3′ DNA-binding domain (3′BD) AV942_17985 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AV942_17985 PF18074 Primosomal protein N C-terminal domain AV942_17990 PF01197 Ribosomal protein L31 AV942_18000 PF00390 Malic enzyme, N-terminal domain AV942_18000 PF03949 Malic enzyme, NAD binding domain AV942_18005 PF01340 Met Apo-repressor, MetJ AV942_18010 PF02219 Methylenetetrahydrofolate reductase AV942_18015 PF03631 Virulence factor BrkB AV942_18030 PF00561 alpha/beta hydrolase fold AV942_18035 PF02580 D-Tyr-tRNA(Tyr) deacylase AV942_18040 PF00583 Acetyltransferase (GNAT) family AV942_18040 PF09500 Putative thioesterase (yiiD_Cterm) AV942_18045 PF00140 Sigma-70 factor, region 1.2 AV942_18045 PF04542 Sigma-70 region 2 AV942_18045 PF04545 Sigma-70, region 4 AV942_18050 PF00563 EAL domain AV942_18050 PF08668 HDOD domain AV942_18055 PF00563 EAL domain AV942_18055 PF08668 HDOD domain AV942_18060 PF18075 FtsX extracellular domain AV942_18065 PF00005 ABC transporter AV942_18070 PF02881 SRP54-type protein, helical bundle domain AV942_18070 PF00448 SRP54-type protein, GTPase domain AV942_18085 PF01914 MarC family integral membrane protein AV942_18095 PF12404 Peptidase AV942_18095 PF00883 Cytosol aminopeptidase family, catalytic domain AV942_18100 PF03749 Sugar fermentation stimulation protein RE domain AV942_18100 PF17746 SfsA N-terminal OB domain AV942_18105 PF01258 Prokaryotic dksA/traR C4-type zinc finger AV942_18110 PF00749 tRNA synthetases class I (E and Q), catalytic domain AV942_18115 PF12627 Probable RNA and SrmB- binding site of polymerase A AV942_18115 PF01743 Poly A polymerase head domain AV942_18115 PF12626 Polymerase A arginine-rich C-terminus AV942_18120 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AV942_18125 PF02548 Ketopantoate hydroxymethyltransferase AV942_18130 PF02569 Pantoate-beta-alanine ligase AV942_18135 PF00282 Pyridoxal-dependent decarboxylase conserved domain AV942_18150 PF01061 ABC-2 type transporter AV942_18155 PF00005 ABC transporter AV942_18160 PF00486 Transcriptional regulatory protein, C terminal AV942_18160 PF00072 Response regulator receiver domain AV942_18165 PF00672 HAMP domain AV942_18165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_18165 PF00512 His Kinase A (phospho-acceptor) domain AV942_18170 PF07715 TonB-dependent Receptor Plug Domain AV942_18170 PF00593 TonB dependent receptor AV942_18175 PF13640 2OG-Fe(II) oxygenase superfamily AV942_18175 PF18331 PKHD-type hydroxylase C-terminal domain AV942_18190 PF01595 Cyclin M transmembrane N-terminal domain AV942_18190 PF00571 CBS domain AV942_18200 PF02554 Carbon starvation protein CstA AV942_18200 PF13722 5TM C-terminal transporter carbon starvation CstA AV942_18220 PF03143 Elongation factor Tu C-terminal domain AV942_18220 PF03144 Elongation factor Tu domain 2 AV942_18220 PF00009 Elongation factor Tu GTP binding domain AV942_18225 PF00679 Elongation factor G C-terminus AV942_18225 PF00009 Elongation factor Tu GTP binding domain AV942_18225 PF03144 Elongation factor Tu domain 2 AV942_18225 PF03764 Elongation factor G, domain IV AV942_18225 PF14492 Elongation Factor G, domain II AV942_18230 PF00177 Ribosomal protein S7p/S5e AV942_18235 PF00164 Ribosomal protein S12/S23 AV942_18240 PF05000 RNA polymerase Rpb1, domain 4 AV942_18240 PF04997 RNA polymerase Rpb1, domain 1 AV942_18240 PF00623 RNA polymerase Rpb1, domain 2 AV942_18240 PF04983 RNA polymerase Rpb1, domain 3 AV942_18240 PF04998 RNA polymerase Rpb1, domain 5 AV942_18245 PF10385 RNA polymerase beta subunit external 1 domain AV942_18245 PF04565 RNA polymerase Rpb2, domain 3 AV942_18245 PF04563 RNA polymerase beta subunit AV942_18245 PF04561 RNA polymerase Rpb2, domain 2 AV942_18245 PF04560 RNA polymerase Rpb2, domain 7 AV942_18245 PF00562 RNA polymerase Rpb2, domain 6 AV942_18250 PF00542 Ribosomal protein L7/L12 C-terminal domain AV942_18250 PF16320 Ribosomal protein L7/L12 dimerisation domain AV942_18255 PF00466 Ribosomal protein L10 AV942_18260 PF00687 Ribosomal protein L1p/L10e family AV942_18265 PF00298 Ribosomal protein L11, RNA binding domain AV942_18265 PF03946 Ribosomal protein L11, N-terminal domain AV942_18285 PF00467 KOW motif AV942_18285 PF02357 Transcription termination factor nusG AV942_18290 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AV942_18300 PF00664 ABC transporter transmembrane region AV942_18300 PF00005 ABC transporter AV942_18305 PF03737 Aldolase/RraA AV942_18310 PF05649 Peptidase family M13 AV942_18310 PF01431 Peptidase family M13 AV942_18320 PF00271 Helicase conserved C-terminal domain AV942_18320 PF03880 DbpA RNA binding domain AV942_18320 PF00270 DEAD/DEAH box helicase AV942_18325 PF01979 Amidohydrolase family AV942_18330 PF08212 Lipocalin-like domain AV942_18335 PF00248 Aldo/keto reductase family AV942_18340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AV942_18345 PF05552 Conserved TM helix AV942_18345 PF00924 Mechanosensitive ion channel AV942_18350 PF07690 Major Facilitator Superfamily AV942_18355 PF00128 Alpha amylase, catalytic domain AV942_18365 PF01227 GTP cyclohydrolase I AV942_18375 PF04371 Porphyromonas-type peptidyl-arginine deiminase AV942_18380 PF00795 Carbon-nitrogen hydrolase AV942_18395 PF00271 Helicase conserved C-terminal domain AV942_18395 PF08494 DEAD/H associated AV942_18395 PF00270 DEAD/DEAH box helicase AV942_18405 PF04679 ATP dependent DNA ligase C terminal region AV942_18405 PF04675 DNA ligase N terminus AV942_18405 PF01068 ATP dependent DNA ligase domain AV942_18410 PF09285 Elongation factor P, C-terminal AV942_18410 PF01132 Elongation factor P (EF-P) OB domain AV942_18410 PF08207 Elongation factor P (EF-P) KOW-like domain AV942_18415 PF00294 pfkB family carbohydrate kinase AV942_18425 PF02965 Vitamin B12 dependent methionine synthase, activation domain AV942_18425 PF00809 Pterin binding enzyme AV942_18425 PF02574 Homocysteine S-methyltransferase AV942_18425 PF02310 B12 binding domain AV942_18425 PF02607 B12 binding domain AV942_18430 PF00043 Glutathione S-transferase, C-terminal domain AV942_18430 PF02798 Glutathione S-transferase, N-terminal domain AV942_18435 PF02798 Glutathione S-transferase, N-terminal domain AV942_18445 PF00561 alpha/beta hydrolase fold AV942_18460 PF00171 Aldehyde dehydrogenase family AV942_18465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AV942_18465 PF00205 Thiamine pyrophosphate enzyme, central domain AV942_18465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AV942_18475 PF00762 Ferrochelatase AV942_18480 PF03806 AbgT putative transporter family AV942_18485 PF01145 SPFH domain / Band 7 family AV942_18490 PF01145 SPFH domain / Band 7 family AV942_18490 PF12221 Bacterial membrane protein N terminal AV942_18495 PF01926 50S ribosome-binding GTPase AV942_18495 PF13167 GTP-binding GTPase N-terminal AV942_18495 PF16360 GTP-binding GTPase Middle Region AV942_18500 PF17209 Hfq protein AV942_18510 PF01119 DNA mismatch repair protein, C-terminal domain AV942_18510 PF08676 MutL C terminal dimerisation domain AV942_18515 PF01520 N-acetylmuramoyl-L-alanine amidase AV942_18520 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AV942_18525 PF03853 YjeF-related protein N-terminus AV942_18525 PF01256 Carbohydrate kinase AV942_18530 PF08331 Domain of unknown function (DUF1730) AV942_18540 PF01208 Uroporphyrinogen decarboxylase (URO-D) AV942_18545 PF09297 NADH pyrophosphatase zinc ribbon domain AV942_18545 PF00293 NUDIX domain AV942_18550 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AV942_18555 PF01475 Ferric uptake regulator family AV942_18565 PF01894 Uncharacterised protein family UPF0047 AV942_18570 PF00691 OmpA family AV942_18570 PF05736 OprF membrane domain AV942_18575 PF03796 DnaB-like helicase C terminal domain AV942_18575 PF00772 DnaB-like helicase N terminal domain AV942_18600 PF03473 MOSC domain AV942_18600 PF03475 3-alpha domain AV942_18615 PF03948 Ribosomal protein L9, C-terminal domain AV942_18615 PF01281 Ribosomal protein L9, N-terminal domain AV942_18620 PF01084 Ribosomal protein S18 AV942_18625 PF01250 Ribosomal protein S6 AV942_18630 PF00512 His Kinase A (phospho-acceptor) domain AV942_18630 PF07689 KaiB domain AV942_18630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_18640 PF02687 FtsX-like permease family AV942_18640 PF12704 MacB-like periplasmic core domain AV942_18640 PF00005 ABC transporter AV942_18650 PF08447 PAS fold AV942_18650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_18655 PF13188 PAS domain AV942_18655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_18655 PF00512 His Kinase A (phospho-acceptor) domain AV942_18655 PF00989 PAS fold AV942_18655 PF13426 PAS domain AV942_18660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AV942_18660 PF02743 Cache domain AV942_18660 PF00672 HAMP domain AV942_18670 PF01545 Cation efflux family AV942_18670 PF16916 Dimerisation domain of Zinc Transporter AV942_18690 PF00933 Glycosyl hydrolase family 3 N terminal domain AV942_18690 PF14310 Fibronectin type III-like domain AV942_18690 PF01915 Glycosyl hydrolase family 3 C-terminal domain AV942_18695 PF07690 Major Facilitator Superfamily AV942_18700 PF00232 Glycosyl hydrolase family 1 AV942_18705 PF00356 Bacterial regulatory proteins, lacI family AV942_18710 PF00083 Sugar (and other) transporter AV942_18715 PF13474 SnoaL-like domain AV942_18725 PF17151 Periplasmic sensor domain AV942_18725 PF00990 Diguanylate cyclase, GGDEF domain AV942_18735 PF04954 Siderophore-interacting protein AV942_18735 PF08021 Siderophore-interacting FAD-binding domain AV942_18740 PF05532 CsbD-like AV942_18765 PF00472 RF-1 domain AV942_18770 PF00561 alpha/beta hydrolase fold AV942_18770 PF00364 Biotin-requiring enzyme AV942_18790 PF01292 Prokaryotic cytochrome b561 AV942_18795 PF04264 YceI-like domain AV942_18800 PF07992 Pyridine nucleotide-disulphide oxidoreductase AV942_18805 PF00593 TonB dependent receptor AV942_18805 PF07715 TonB-dependent Receptor Plug Domain AV942_18815 PF03466 LysR substrate binding domain AV942_18815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_18820 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AV942_18825 PF00107 Zinc-binding dehydrogenase AV942_18825 PF16884 N-terminal domain of oxidoreductase AV942_18830 PF00563 EAL domain AV942_18830 PF01590 GAF domain AV942_18830 PF00360 Phytochrome region AV942_18830 PF00990 Diguanylate cyclase, GGDEF domain AV942_18835 PF00072 Response regulator receiver domain AV942_18835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_18835 PF09308 LuxQ, periplasmic AV942_18835 PF00512 His Kinase A (phospho-acceptor) domain AV942_18845 PF00296 Luciferase-like monooxygenase AV942_18850 PF01380 SIS domain AV942_18855 PF00455 DeoR C terminal sensor domain AV942_18855 PF08220 DeoR-like helix-turn-helix domain AV942_18860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AV942_18860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AV942_18865 PF00132 Bacterial transferase hexapeptide (six repeats) AV942_18865 PF12804 MobA-like NTP transferase domain AV942_18865 PF14602 Hexapeptide repeat of succinyl-transferase AV942_18875 PF00892 EamA-like transporter family AV942_18880 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AV942_18880 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AV942_18885 PF00730 HhH-GPD superfamily base excision DNA repair protein AV942_18885 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain AV942_18890 PF00144 Beta-lactamase AV942_18895 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AV942_18895 PF17944 Arginine decarboxylase C-terminal helical extension AV942_18895 PF17810 Arginine decarboxylase helical bundle domain AV942_18905 PF02233 NAD(P) transhydrogenase beta subunit AV942_18910 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AV942_18915 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AV942_18915 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AV942_18955 PF00593 TonB dependent receptor AV942_18955 PF07715 TonB-dependent Receptor Plug Domain AV942_18990 PF01040 UbiA prenyltransferase family AV942_18995 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AV942_19000 PF00510 Cytochrome c oxidase subunit III AV942_19005 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV942_19010 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AV942_19010 PF06481 COX Aromatic Rich Motif AV942_19020 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AV942_19025 PF01850 PIN domain AV942_19045 PF00118 TCP-1/cpn60 chaperonin family AV942_19050 PF00166 Chaperonin 10 Kd subunit AV942_19055 PF04186 FxsA cytoplasmic membrane protein AV942_19060 PF03091 CutA1 divalent ion tolerance protein AV942_19065 PF02683 Cytochrome C biogenesis protein transmembrane region AV942_19065 PF11412 Disulphide bond corrector protein DsbC AV942_19070 PF01551 Peptidase family M23 AV942_19075 PF01220 Dehydroquinase class II AV942_19080 PF00364 Biotin-requiring enzyme AV942_19085 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AV942_19085 PF02785 Biotin carboxylase C-terminal domain AV942_19085 PF00289 Biotin carboxylase, N-terminal domain AV942_19105 PF07733 Bacterial DNA polymerase III alpha NTPase domain AV942_19105 PF00929 Exonuclease AV942_19105 PF02811 PHP domain AV942_19105 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AV942_19105 PF14579 Helix-hairpin-helix motif AV942_19105 PF11490 DNA polymerase III polC-type N-terminus II AV942_19125 PF01355 High potential iron-sulfur protein AV942_19130 PF01425 Amidase AV942_19145 PF01207 Dihydrouridine synthase (Dus) AV942_19150 PF02954 Bacterial regulatory protein, Fis family AV942_19155 PF01808 AICARFT/IMPCHase bienzyme AV942_19155 PF02142 MGS-like domain AV942_19165 PF02844 Phosphoribosylglycinamide synthetase, N domain AV942_19165 PF02843 Phosphoribosylglycinamide synthetase, C domain AV942_19165 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AV942_19180 PF00520 Ion transport protein AV942_19180 PF00027 Cyclic nucleotide-binding domain AV942_19185 PF00485 Phosphoribulokinase / Uridine kinase family AV942_19195 PF00486 Transcriptional regulatory protein, C terminal AV942_19195 PF00072 Response regulator receiver domain AV942_19200 PF00672 HAMP domain AV942_19200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AV942_19200 PF00512 His Kinase A (phospho-acceptor) domain AV942_19210 PF17137 Domain of unknown function (DUF5110) AV942_19210 PF16338 Domain of unknown function (DUF4968) AV942_19210 PF01055 Glycosyl hydrolases family 31 AV942_19210 PF13802 Galactose mutarotase-like AV942_19220 PF01430 Hsp33 protein AV942_19225 PF01479 S4 domain AV942_19230 PF11356 Type II secretion system protein C AV942_19235 PF00263 Bacterial type II and III secretion system protein AV942_19235 PF03958 Bacterial type II/III secretion system short domain AV942_19240 PF00437 Type II/IV secretion system protein AV942_19245 PF00482 Type II secretion system (T2SS), protein F AV942_19250 PF07963 Prokaryotic N-terminal methylation motif AV942_19250 PF08334 Type II secretion system (T2SS), protein G AV942_19255 PF12019 Type II transport protein GspH AV942_19260 PF07963 Prokaryotic N-terminal methylation motif AV942_19260 PF02501 Type II secretion system (T2SS), protein I AV942_19265 PF07963 Prokaryotic N-terminal methylation motif AV942_19265 PF11612 Type II secretion system (T2SS), protein J AV942_19275 PF12693 GspL periplasmic domain AV942_19275 PF05134 Type II secretion system (T2SS), protein L AV942_19280 PF04612 Type II secretion system (T2SS), protein M AV942_19295 PF00171 Aldehyde dehydrogenase family AV942_19300 PF01931 Protein of unknown function DUF84 AV942_19305 PF13419 Haloacid dehalogenase-like hydrolase AV942_19310 PF00293 NUDIX domain AV942_19315 PF00459 Inositol monophosphatase family AV942_19330 PF04349 Periplasmic glucan biosynthesis protein, MdoG AV942_19340 PF06794 Uncharacterised protein family (UPF0270) AV942_19345 PF00561 alpha/beta hydrolase fold AV942_19355 PF12848 ABC transporter AV942_19355 PF00005 ABC transporter AV942_19370 PF04102 SlyX AV942_19380 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AV942_19380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AV942_19390 PF03449 Transcription elongation factor, N-terminal AV942_19390 PF01272 Transcription elongation factor, GreA/GreB, C-term AV942_19395 PF00575 S1 RNA binding domain AV942_19395 PF17674 HHH domain AV942_19395 PF16921 Tex protein YqgF-like domain AV942_19395 PF09371 Tex-like protein N-terminal domain AV942_19400 PF04820 Tryptophan halogenase AV942_19420 PF12833 Helix-turn-helix domain AV942_19430 PF04616 Glycosyl hydrolases family 43 AV942_19440 PF00331 Glycosyl hydrolase family 10 AV942_19440 PF00553 Cellulose binding domain AV942_19440 PF03422 Carbohydrate binding module (family 6) AV942_19445 PF00248 Aldo/keto reductase family AV942_19450 PF00456 Transketolase, thiamine diphosphate binding domain AV942_19450 PF02779 Transketolase, pyrimidine binding domain AV942_19450 PF02780 Transketolase, C-terminal domain AV942_19460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AV942_19460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AV942_19465 PF00923 Transaldolase/Fructose-6-phosphate aldolase AV942_19475 PF00933 Glycosyl hydrolase family 3 N terminal domain AV942_19475 PF01915 Glycosyl hydrolase family 3 C-terminal domain AV942_19475 PF14310 Fibronectin type III-like domain AV942_19480 PF00083 Sugar (and other) transporter AV942_19495 PF00457 Glycosyl hydrolases family 11 AV942_19500 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AV942_19525 PF00561 alpha/beta hydrolase fold AV942_19530 PF00156 Phosphoribosyl transferase domain AV942_19540 PF01521 Iron-sulphur cluster biosynthesis AV942_19540 PF01106 NifU-like domain AV942_19550 PF01177 Asp/Glu/Hydantoin racemase AV942_19560 PF01554 MatE AV942_19575 PF02630 SCO1/SenC AV942_19580 PF01040 UbiA prenyltransferase family AV942_19585 PF02628 Cytochrome oxidase assembly protein AV942_19605 PF00510 Cytochrome c oxidase subunit III AV942_19610 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AV942_19615 PF00115 Cytochrome C and Quinol oxidase polypeptide I AV942_19620 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AV942_19620 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AV942_19625 PF01726 LexA DNA binding domain AV942_19625 PF00717 Peptidase S24-like AV942_19630 PF01553 Acyltransferase AV942_19635 PF00585 C-terminal regulatory domain of Threonine dehydratase AV942_19635 PF00291 Pyridoxal-phosphate dependent enzyme AV942_19640 PF00920 Dehydratase family AV942_19645 PF03458 UPF0126 domain AV942_19650 PF13335 Magnesium chelatase, subunit ChlI C-terminal AV942_19650 PF01078 Magnesium chelatase, subunit ChlI AV942_19655 PF03466 LysR substrate binding domain AV942_19655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AV942_19660 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AV942_19660 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AV942_19665 PF07690 Major Facilitator Superfamily AV942_19675 PF17243 POTRA domain TamA domain 1 AV942_19675 PF07244 Surface antigen variable number repeat AV942_19675 PF01103 Surface antigen AV942_19680 PF04357 TamB, inner membrane protein subunit of TAM complex AV942_19705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AV942_19705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AV942_19715 PF01472 PUA domain AV942_19715 PF00696 Amino acid kinase family AV942_19735 PF03109 ABC1 family AV942_19760 PF01979 Amidohydrolase family AV942_19785 PF01206 Sulfurtransferase TusA AV942_19790 PF00156 Phosphoribosyl transferase domain AV942_19795 PF03725 3' exoribonuclease family, domain 2 AV942_19795 PF01138 3' exoribonuclease family, domain 1 AV942_19800 PF03755 YicC-like family, N-terminal region AV942_19800 PF08340 Domain of unknown function (DUF1732) AV942_19810 PF07804 HipA-like C-terminal domain AV942_19810 PF13657 HipA N-terminal domain AV942_19815 PF01381 Helix-turn-helix AV942_19850 PF02384 N-6 DNA Methylase AV942_19850 PF12161 HsdM N-terminal domain AV942_19855 PF00271 Helicase conserved C-terminal domain AV942_19855 PF04851 Type III restriction enzyme, res subunit AV942_19855 PF08463 EcoEI R protein C-terminal AV942_19855 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) AV942_19880 PF00749 tRNA synthetases class I (E and Q), catalytic domain AV942_19905 PF00196 Bacterial regulatory proteins, luxR family AV942_19905 PF00072 Response regulator receiver domain AV942_19910 PF13808 DDE_Tnp_1-associated AV942_19910 PF01609 Transposase DDE domain AV942_19915 PF16385 Domain of unknown function AV942_19915 PF00884 Sulfatase AV942_19920 PF07726 ATPase family associated with various cellular activities (AAA) AV942_19920 PF17863 AAA lid domain AV942_19935 PF13519 von Willebrand factor type A domain AV942_19955 PF00732 GMC oxidoreductase AV942_19955 PF05199 GMC oxidoreductase AV942_19960 PF00171 Aldehyde dehydrogenase family AV942_19965 PF00501 AMP-binding enzyme AV942_19965 PF13193 AMP-binding enzyme C-terminal domain AV942_19970 PF02515 CoA-transferase family III AV942_19975 PF00106 short chain dehydrogenase AV942_19980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AV942_19980 PF02770 Acyl-CoA dehydrogenase, middle domain AV942_19980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AV942_19985 PF02803 Thiolase, C-terminal domain AV942_19985 PF00108 Thiolase, N-terminal domain AV942_19990 PF00378 Enoyl-CoA hydratase/isomerase AV942_19995 PF12833 Helix-turn-helix domain AV942_19995 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AV942_20000 PF13276 HTH-like domain AV942_20000 PF13333 Integrase core domain AV942_20000 PF00665 Integrase core domain AV942_20005 PF01527 Transposase AV942_20010 PF13411 MerR HTH family regulatory protein AV942_20035 PF13784 Fic/DOC family N-terminal AV942_20035 PF02661 Fic/DOC family AV942_20045 PF00356 Bacterial regulatory proteins, lacI family AV942_20055 PF00691 OmpA family AV942_20055 PF05736 OprF membrane domain AV942_20060 PF01966 HD domain AV942_20075 PF02798 Glutathione S-transferase, N-terminal domain AV942_20075 PF00043 Glutathione S-transferase, C-terminal domain AV942_20085 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AV942_20085 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AV942_20090 PF02874 ATP synthase alpha/beta family, beta-barrel domain AV942_20090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV942_20095 PF00231 ATP synthase AV942_20100 PF02874 ATP synthase alpha/beta family, beta-barrel domain AV942_20100 PF00306 ATP synthase alpha/beta chain, C terminal domain AV942_20100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AV942_20105 PF00213 ATP synthase delta (OSCP) subunit AV942_20110 PF00430 ATP synthase B/B' CF(0) AV942_20115 PF00137 ATP synthase subunit C AV942_20120 PF00119 ATP synthase A chain AV942_20130 PF17762 HTH domain found in ParB protein AV942_20130 PF02195 ParB-like nuclease domain AV942_20135 PF13614 AAA domain AV942_20140 PF02527 rRNA small subunit methyltransferase G AV942_20145 PF13932 GidA associated domain AV942_20145 PF01134 Glucose inhibited division protein A AV942_20160 PF00258 Flavodoxin AV942_20165 PF10396 GTP-binding protein TrmE N-terminus AV942_20165 PF12631 MnmE helical domain AV942_20165 PF01926 50S ribosome-binding GTPase AV942_20170 PF04461 Protein of unknown function (DUF520) AV942_20175 PF14849 YidC periplasmic domain AV942_20175 PF02096 60Kd inner membrane protein AV942_20180 PF00825 Ribonuclease P AV942_20185 PF00468 Ribosomal protein L34 AV942_20415 PF13340 Putative transposase of IS4/5 family (DUF4096) AV942_20530 PF00437 Type II/IV secretion system protein AV942_20705 PF00589 Phage integrase family AV942_20720 PF00664 ABC transporter transmembrane region AV942_20720 PF00005 ABC transporter AV942_20740 PF00665 Integrase core domain AV942_20740 PF13276 HTH-like domain AV942_20740 PF13333 Integrase core domain AV942_20820 PF00072 Response regulator receiver domain AV942_20820 PF01339 CheB methylesterase AV942_20845 PF00239 Resolvase, N terminal domain AV942_20845 PF02796 Helix-turn-helix domain of resolvase AV942_20860 PF07693 KAP family P-loop domain AV942_20890 PF05593 RHS Repeat AV942_20890 PF03527 RHS protein AV942_20900 PF03527 RHS protein AV942_20900 PF05593 RHS Repeat AV942_21005 PF00975 Thioesterase domain AV942_21015 PF00668 Condensation domain AV942_21015 PF00501 AMP-binding enzyme AV942_21015 PF00550 Phosphopantetheine attachment site AV942_21015 PF07993 Male sterility protein AV942_21015 PF13193 AMP-binding enzyme C-terminal domain AV942_21020 PF00501 AMP-binding enzyme AV942_21020 PF00668 Condensation domain AV942_21020 PF13193 AMP-binding enzyme C-terminal domain AV942_21020 PF00550 Phosphopantetheine attachment site AV942_21020 PF00975 Thioesterase domain AV942_21025 PF16653 Saccharopine dehydrogenase C-terminal domain AV942_21025 PF03435 Saccharopine dehydrogenase NADP binding domain AV942_21030 PF00664 ABC transporter transmembrane region AV942_21030 PF00005 ABC transporter AV942_21035 PF01804 Penicillin amidase AV942_21050 PF03621 MbtH-like protein AV942_21055 PF13193 AMP-binding enzyme C-terminal domain AV942_21055 PF00501 AMP-binding enzyme AV942_21055 PF00668 Condensation domain AV942_21055 PF00550 Phosphopantetheine attachment site AV942_21070 PF00501 AMP-binding enzyme AV942_21070 PF00550 Phosphopantetheine attachment site AV942_21070 PF07993 Male sterility protein AV942_21070 PF00668 Condensation domain AV942_21070 PF13193 AMP-binding enzyme C-terminal domain AV942_21080 PF13193 AMP-binding enzyme C-terminal domain AV942_21080 PF00550 Phosphopantetheine attachment site AV942_21080 PF00668 Condensation domain AV942_21080 PF00501 AMP-binding enzyme AV942_21085 PF00109 Beta-ketoacyl synthase, N-terminal domain AV942_21085 PF02801 Beta-ketoacyl synthase, C-terminal domain AV942_21085 PF00698 Acyl transferase domain AV942_21085 PF00668 Condensation domain AV942_21085 PF16197 Ketoacyl-synthetase C-terminal extension AV942_21085 PF00550 Phosphopantetheine attachment site AV942_21090 PF00550 Phosphopantetheine attachment site AV942_21090 PF07993 Male sterility protein AV942_21090 PF00668 Condensation domain AV942_21090 PF13193 AMP-binding enzyme C-terminal domain AV942_21090 PF00501 AMP-binding enzyme AV942_21095 PF00501 AMP-binding enzyme AV942_21095 PF00668 Condensation domain AV942_21095 PF00550 Phosphopantetheine attachment site AV942_21095 PF00975 Thioesterase domain AV942_21095 PF13193 AMP-binding enzyme C-terminal domain AV942_21115 PF00668 Condensation domain AV942_21115 PF00550 Phosphopantetheine attachment site AV942_21115 PF00975 Thioesterase domain AV942_21115 PF13193 AMP-binding enzyme C-terminal domain AV942_21115 PF00501 AMP-binding enzyme AV942_21120 PF00501 AMP-binding enzyme AV942_21120 PF13193 AMP-binding enzyme C-terminal domain AV942_21120 PF00668 Condensation domain AV942_21120 PF00975 Thioesterase domain AV942_21120 PF00550 Phosphopantetheine attachment site AV942_21155 PF11426 Tn7 transposition regulator TnsC AV942_21155 PF13401 AAA domain AV942_21160 PF00665 Integrase core domain AV942_21165 PF08722 TnsA endonuclease N terminal AV942_21165 PF08721 TnsA endonuclease C terminal AV942_21220 PF00580 UvrD/REP helicase N-terminal domain AV942_21220 PF13361 UvrD-like helicase C-terminal domain AV942_21260 PF00437 Type II/IV secretion system protein AV942_21290 PF00665 Integrase core domain AV942_21295 PF01695 IstB-like ATP binding protein AV942_21310 PF03707 Bacterial signalling protein N terminal repeat AV942_21310 PF00990 Diguanylate cyclase, GGDEF domain AV942_21310 PF00563 EAL domain AV942_21325 PF08448 PAS fold AV942_21325 PF00990 Diguanylate cyclase, GGDEF domain AV942_21410 PF13614 AAA domain