locus-tag class description ambt_00005 PF11638 DnaA N-terminal domain ambt_00005 PF08299 Bacterial dnaA protein helix-turn-helix ambt_00005 PF00308 Bacterial dnaA protein ambt_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ambt_00010 PF02767 DNA polymerase III beta subunit, central domain ambt_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ambt_00015 PF02463 RecF/RecN/SMC N terminal domain ambt_00020 PF00986 DNA gyrase B subunit, carboxyl terminus ambt_00020 PF01751 Toprim domain ambt_00020 PF00204 DNA gyrase B ambt_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_00020 PF18053 DNA gyrase B subunit insert domain ambt_00030 PF05746 DALR anticodon binding domain ambt_00030 PF02092 Glycyl-tRNA synthetase beta subunit ambt_00035 PF02091 Glycyl-tRNA synthetase alpha subunit ambt_00040 PF03352 Methyladenine glycosylase ambt_00050 PF04220 Der GTPase activator (YihI) ambt_00055 PF00034 Cytochrome c ambt_00060 PF01926 50S ribosome-binding GTPase ambt_00065 PF00476 DNA polymerase family A ambt_00065 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ambt_00065 PF01612 3'-5' exonuclease ambt_00065 PF01367 5'-3' exonuclease, C-terminal SAM fold ambt_00075 PF02386 Cation transport protein ambt_00080 PF05818 Enterobacterial TraT complement resistance protein ambt_00090 PF02254 TrkA-N domain ambt_00090 PF02080 TrkA-C domain ambt_00095 PF01029 NusB family ambt_00095 PF01189 16S rRNA methyltransferase RsmB/F ambt_00100 PF00551 Formyl transferase ambt_00100 PF02911 Formyl transferase, C-terminal domain ambt_00105 PF01327 Polypeptide deformylase ambt_00115 PF02481 DNA recombination-mediator protein A ambt_00115 PF17782 DprA winged helix domain ambt_00120 PF04361 Protein of unknown function (DUF494) ambt_00130 PF01300 Telomere recombination ambt_00135 PF01218 Coproporphyrinogen III oxidase ambt_00140 PF03922 OmpW family ambt_00145 PF01152 Bacterial-like globin ambt_00150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ambt_00150 PF08501 Shikimate dehydrogenase substrate binding domain ambt_00150 PF01488 Shikimate / quinate 5-dehydrogenase ambt_00155 PF00132 Bacterial transferase hexapeptide (six repeats) ambt_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_00160 PF03466 LysR substrate binding domain ambt_00185 PF01565 FAD binding domain ambt_00185 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ambt_00190 PF02237 Biotin protein ligase C terminal domain ambt_00190 PF03099 Biotin/lipoate A/B protein ligase family ambt_00190 PF08279 HTH domain ambt_00195 PF03309 Type III pantothenate kinase ambt_00205 PF00009 Elongation factor Tu GTP binding domain ambt_00205 PF03143 Elongation factor Tu C-terminal domain ambt_00205 PF03144 Elongation factor Tu domain 2 ambt_00230 PF06628 Catalase-related immune-responsive ambt_00230 PF00199 Catalase ambt_00235 PF00665 Integrase core domain ambt_00240 PF01695 IstB-like ATP binding protein ambt_00245 PF06628 Catalase-related immune-responsive ambt_00245 PF00199 Catalase ambt_00260 PF00248 Aldo/keto reductase family ambt_00265 PF02690 Na+/Pi-cotransporter ambt_00275 PF00501 AMP-binding enzyme ambt_00275 PF13193 AMP-binding enzyme C-terminal domain ambt_00275 PF16177 Acetyl-coenzyme A synthetase N-terminus ambt_00280 PF00072 Response regulator receiver domain ambt_00280 PF00196 Bacterial regulatory proteins, luxR family ambt_00290 PF18030 RimK PreATP-grasp domain ambt_00290 PF08443 RimK-like ATP-grasp domain ambt_00300 PF18030 RimK PreATP-grasp domain ambt_00300 PF08443 RimK-like ATP-grasp domain ambt_00310 PF00672 HAMP domain ambt_00310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_00310 PF00512 His Kinase A (phospho-acceptor) domain ambt_00310 PF01627 Hpt domain ambt_00310 PF00072 Response regulator receiver domain ambt_00320 PF00474 Sodium:solute symporter family ambt_00335 PF00072 Response regulator receiver domain ambt_00345 PF02469 Fasciclin domain ambt_00360 PF01773 Na+ dependent nucleoside transporter N-terminus ambt_00360 PF07662 Na+ dependent nucleoside transporter C-terminus ambt_00360 PF07670 Nucleoside recognition ambt_00365 PF00485 Phosphoribulokinase / Uridine kinase family ambt_00380 PF00593 TonB dependent receptor ambt_00410 PF02863 Arginine repressor, C-terminal domain ambt_00410 PF01316 Arginine repressor, DNA binding domain ambt_00415 PF00056 lactate/malate dehydrogenase, NAD binding domain ambt_00415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ambt_00425 PF00141 Peroxidase ambt_00430 PF00311 Phosphoenolpyruvate carboxylase ambt_00435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ambt_00435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ambt_00440 PF12241 Trans-2-enoyl-CoA reductase catalytic region ambt_00440 PF07055 Enoyl reductase FAD binding domain ambt_00440 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ambt_00450 PF03116 NQR2, RnfD, RnfE family ambt_00455 PF04205 FMN-binding domain ambt_00460 PF02508 Rnf-Nqr subunit, membrane protein ambt_00465 PF02508 Rnf-Nqr subunit, membrane protein ambt_00470 PF00175 Oxidoreductase NAD-binding domain ambt_00470 PF00111 2Fe-2S iron-sulfur cluster binding domain ambt_00470 PF00970 Oxidoreductase FAD-binding domain ambt_00475 PF02424 ApbE family ambt_00485 PF11799 impB/mucB/samB family C-terminal domain ambt_00485 PF11798 IMS family HHH motif ambt_00485 PF00817 impB/mucB/samB family ambt_00495 PF00753 Metallo-beta-lactamase superfamily ambt_00495 PF16123 Hydroxyacylglutathione hydrolase C-terminus ambt_00505 PF13230 Glutamine amidotransferases class-II ambt_00515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_00515 PF03466 LysR substrate binding domain ambt_00525 PF00753 Metallo-beta-lactamase superfamily ambt_00530 PF07969 Amidohydrolase family ambt_00535 PF00291 Pyridoxal-phosphate dependent enzyme ambt_00540 PF00563 EAL domain ambt_00540 PF08448 PAS fold ambt_00540 PF00990 Diguanylate cyclase, GGDEF domain ambt_00545 PF08000 Bacterial PH domain ambt_00550 PF00326 Prolyl oligopeptidase family ambt_00550 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region ambt_00555 PF13460 NAD(P)H-binding ambt_00560 PF05175 Methyltransferase small domain ambt_00575 PF07238 PilZ domain ambt_00575 PF00535 Glycosyl transferase family 2 ambt_00575 PF03170 Bacterial cellulose synthase subunit ambt_00585 PF01270 Glycosyl hydrolases family 8 ambt_00590 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ambt_00590 PF13181 Tetratricopeptide repeat ambt_00600 PF02472 Biopolymer transport protein ExbD/TolR ambt_00610 PF00258 Flavodoxin ambt_00630 PF01625 Peptide methionine sulfoxide reductase ambt_00645 PF00209 Sodium:neurotransmitter symporter family ambt_00650 PF01370 NAD dependent epimerase/dehydratase family ambt_00665 PF00924 Mechanosensitive ion channel ambt_00670 PF01553 Acyltransferase ambt_00675 PF01553 Acyltransferase ambt_00680 PF00756 Putative esterase ambt_00685 PF00563 EAL domain ambt_00685 PF00990 Diguanylate cyclase, GGDEF domain ambt_00685 PF03707 Bacterial signalling protein N terminal repeat ambt_00705 PF01207 Dihydrouridine synthase (Dus) ambt_00715 PF04012 PspA/IM30 family ambt_00745 PF00667 FAD binding domain ambt_00745 PF00258 Flavodoxin ambt_00745 PF00175 Oxidoreductase NAD-binding domain ambt_00750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ambt_00750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ambt_00755 PF01507 Phosphoadenosine phosphosulfate reductase family ambt_00765 PF00990 Diguanylate cyclase, GGDEF domain ambt_00765 PF03707 Bacterial signalling protein N terminal repeat ambt_00765 PF00563 EAL domain ambt_00770 PF03167 Uracil DNA glycosylase superfamily ambt_00780 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_00780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ambt_00800 PF00440 Bacterial regulatory proteins, tetR family ambt_00805 PF05958 tRNA (Uracil-5-)-methyltransferase ambt_00830 PF03104 DNA polymerase family B, exonuclease domain ambt_00830 PF00136 DNA polymerase family B ambt_00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_00840 PF00512 His Kinase A (phospho-acceptor) domain ambt_00850 PF08769 Sporulation initiation factor Spo0A C terminal ambt_00850 PF00072 Response regulator receiver domain ambt_00860 PF01925 Sulfite exporter TauE/SafE ambt_00870 PF03466 LysR substrate binding domain ambt_00870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_00875 PF03372 Endonuclease/Exonuclease/phosphatase family ambt_00890 PF00999 Sodium/hydrogen exchanger family ambt_00890 PF02254 TrkA-N domain ambt_00900 PF00141 Peroxidase ambt_00910 PF00924 Mechanosensitive ion channel ambt_00910 PF12795 Mechanosensitive ion channel porin domain ambt_00910 PF12794 Mechanosensitive ion channel inner membrane domain 1 ambt_00915 PF07729 FCD domain ambt_00915 PF00392 Bacterial regulatory proteins, gntR family ambt_00920 PF00294 pfkB family carbohydrate kinase ambt_00925 PF01081 KDPG and KHG aldolase ambt_00950 PF00990 Diguanylate cyclase, GGDEF domain ambt_00950 PF00563 EAL domain ambt_00950 PF03707 Bacterial signalling protein N terminal repeat ambt_00955 PF00270 DEAD/DEAH box helicase ambt_00955 PF00271 Helicase conserved C-terminal domain ambt_00960 PF01061 ABC-2 type transporter ambt_00960 PF00498 FHA domain ambt_00960 PF00005 ABC transporter ambt_00965 PF16485 Protealysin propeptide ambt_00965 PF02868 Thermolysin metallopeptidase, alpha-helical domain ambt_00965 PF01447 Thermolysin metallopeptidase, catalytic domain ambt_00970 PF07504 Fungalysin/Thermolysin Propeptide Motif ambt_00970 PF01447 Thermolysin metallopeptidase, catalytic domain ambt_00970 PF02868 Thermolysin metallopeptidase, alpha-helical domain ambt_00970 PF03413 Peptidase propeptide and YPEB domain ambt_00975 PF00069 Protein kinase domain ambt_00975 PF00805 Pentapeptide repeats (8 copies) ambt_01045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_01045 PF03466 LysR substrate binding domain ambt_01065 PF01527 Transposase ambt_01070 PF13276 HTH-like domain ambt_01070 PF00665 Integrase core domain ambt_01070 PF13333 Integrase core domain ambt_01080 PF07729 FCD domain ambt_01080 PF00392 Bacterial regulatory proteins, gntR family ambt_01090 PF07730 Histidine kinase ambt_01095 PF00196 Bacterial regulatory proteins, luxR family ambt_01095 PF00072 Response regulator receiver domain ambt_01100 PF00171 Aldehyde dehydrogenase family ambt_01105 PF04205 FMN-binding domain ambt_01105 PF12801 4Fe-4S binding domain ambt_01115 PF00072 Response regulator receiver domain ambt_01115 PF09456 RcsC Alpha-Beta-Loop (ABL) ambt_01115 PF00512 His Kinase A (phospho-acceptor) domain ambt_01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_01120 PF00072 Response regulator receiver domain ambt_01120 PF00196 Bacterial regulatory proteins, luxR family ambt_01150 PF13186 Iron-sulfur cluster-binding domain ambt_01150 PF04055 Radical SAM superfamily ambt_01155 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ambt_01160 PF03070 TENA/THI-4/PQQC family ambt_01165 PF12706 Beta-lactamase superfamily domain ambt_01170 PF00883 Cytosol aminopeptidase family, catalytic domain ambt_01170 PF02789 Cytosol aminopeptidase family, N-terminal domain ambt_01180 PF00005 ABC transporter ambt_01205 PF13360 PQQ-like domain ambt_01205 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ambt_01215 PF00990 Diguanylate cyclase, GGDEF domain ambt_01220 PF05230 MASE2 domain ambt_01220 PF00990 Diguanylate cyclase, GGDEF domain ambt_01240 PF00528 Binding-protein-dependent transport system inner membrane component ambt_01245 PF00528 Binding-protein-dependent transport system inner membrane component ambt_01250 PF08402 TOBE domain ambt_01250 PF00005 ABC transporter ambt_01260 PF00557 Metallopeptidase family M24 ambt_01260 PF01321 Creatinase/Prolidase N-terminal domain ambt_01300 PF01042 Endoribonuclease L-PSP ambt_01315 PF05221 S-adenosyl-L-homocysteine hydrolase ambt_01315 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ambt_01320 PF00563 EAL domain ambt_01320 PF00990 Diguanylate cyclase, GGDEF domain ambt_01320 PF03707 Bacterial signalling protein N terminal repeat ambt_01340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ambt_01340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ambt_01390 PF04545 Sigma-70, region 4 ambt_01390 PF04542 Sigma-70 region 2 ambt_01400 PF03739 Lipopolysaccharide export system permease LptF/LptG ambt_01405 PF03739 Lipopolysaccharide export system permease LptF/LptG ambt_01415 PF02789 Cytosol aminopeptidase family, N-terminal domain ambt_01415 PF00883 Cytosol aminopeptidase family, catalytic domain ambt_01420 PF04364 DNA polymerase III chi subunit, HolC ambt_01425 PF08264 Anticodon-binding domain of tRNA ambt_01425 PF00133 tRNA synthetases class I (I, L, M and V) ambt_01425 PF10458 Valyl tRNA synthetase tRNA binding arm ambt_01430 PF00672 HAMP domain ambt_01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_01430 PF00512 His Kinase A (phospho-acceptor) domain ambt_01430 PF01627 Hpt domain ambt_01430 PF00072 Response regulator receiver domain ambt_01430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ambt_01445 PF00990 Diguanylate cyclase, GGDEF domain ambt_01445 PF17158 Membrane-associated sensor, integral membrane domain ambt_01455 PF06877 Regulator of ribonuclease activity B ambt_01460 PF01553 Acyltransferase ambt_01465 PF00072 Response regulator receiver domain ambt_01470 PF02954 Bacterial regulatory protein, Fis family ambt_01470 PF00072 Response regulator receiver domain ambt_01470 PF00158 Sigma-54 interaction domain ambt_01475 PF00512 His Kinase A (phospho-acceptor) domain ambt_01475 PF00989 PAS fold ambt_01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_01485 PF00120 Glutamine synthetase, catalytic domain ambt_01485 PF03951 Glutamine synthetase, beta-Grasp domain ambt_01495 PF00512 His Kinase A (phospho-acceptor) domain ambt_01495 PF00072 Response regulator receiver domain ambt_01495 PF13188 PAS domain ambt_01495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_01495 PF08448 PAS fold ambt_01500 PF00155 Aminotransferase class I and II ambt_01505 PF01566 Natural resistance-associated macrophage protein ambt_01545 PF00206 Lyase ambt_01545 PF10415 Fumarase C C-terminus ambt_01555 PF03775 Septum formation inhibitor MinC, C-terminal domain ambt_01555 PF05209 Septum formation inhibitor MinC, N-terminal domain ambt_01560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ambt_01565 PF03776 Septum formation topological specificity factor MinE ambt_01570 PF03976 Polyphosphate kinase 2 (PPK2) ambt_01575 PF01521 Iron-sulphur cluster biosynthesis ambt_01580 PF13417 Glutathione S-transferase, N-terminal domain ambt_01580 PF00043 Glutathione S-transferase, C-terminal domain ambt_01585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ambt_01595 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ambt_01605 PF07690 Major Facilitator Superfamily ambt_01615 PF03702 Anhydro-N-acetylmuramic acid kinase ambt_01620 PF01551 Peptidase family M23 ambt_01620 PF04225 Opacity-associated protein A LysM-like domain ambt_01645 PF00581 Rhodanese-like domain ambt_01650 PF01497 Periplasmic binding protein ambt_01660 PF01048 Phosphorylase superfamily ambt_01675 PF01381 Helix-turn-helix ambt_01685 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_01685 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ambt_01690 PF00310 Glutamine amidotransferases class-II ambt_01690 PF01645 Conserved region in glutamate synthase ambt_01690 PF01493 GXGXG motif ambt_01690 PF04898 Glutamate synthase central domain ambt_01695 PF18415 Histidine kinase receptor ArcB trans-membrane domain ambt_01695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_01695 PF00072 Response regulator receiver domain ambt_01695 PF00989 PAS fold ambt_01695 PF00512 His Kinase A (phospho-acceptor) domain ambt_01695 PF01627 Hpt domain ambt_01710 PF00990 Diguanylate cyclase, GGDEF domain ambt_01715 PF04303 PrpF protein ambt_01720 PF00330 Aconitase family (aconitate hydratase) ambt_01720 PF00694 Aconitase C-terminal domain ambt_01725 PF00285 Citrate synthase, C-terminal domain ambt_01740 PF07715 TonB-dependent Receptor Plug Domain ambt_01740 PF00593 TonB dependent receptor ambt_01745 PF00072 Response regulator receiver domain ambt_01745 PF00196 Bacterial regulatory proteins, luxR family ambt_01750 PF07730 Histidine kinase ambt_01755 PF00893 Small Multidrug Resistance protein ambt_01815 PF07690 Major Facilitator Superfamily ambt_01820 PF04972 BON domain ambt_01825 PF13580 SIS domain ambt_01830 PF02021 Uncharacterised protein family UPF0102 ambt_01835 PF04348 LppC putative lipoprotein ambt_01840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ambt_01850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ambt_01855 PF16653 Saccharopine dehydrogenase C-terminal domain ambt_01855 PF03435 Saccharopine dehydrogenase NADP binding domain ambt_01880 PF00989 PAS fold ambt_01880 PF00512 His Kinase A (phospho-acceptor) domain ambt_01880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_01880 PF16736 Single Cache-like ambt_01885 PF00072 Response regulator receiver domain ambt_01885 PF00486 Transcriptional regulatory protein, C terminal ambt_01890 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ambt_01895 PF00072 Response regulator receiver domain ambt_01900 PF01758 Sodium Bile acid symporter family ambt_01905 PF03358 NADPH-dependent FMN reductase ambt_01915 PF01022 Bacterial regulatory protein, arsR family ambt_01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_01930 PF07730 Histidine kinase ambt_01935 PF00196 Bacterial regulatory proteins, luxR family ambt_01935 PF00072 Response regulator receiver domain ambt_01940 PF08240 Alcohol dehydrogenase GroES-like domain ambt_01940 PF00107 Zinc-binding dehydrogenase ambt_01945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_01945 PF03466 LysR substrate binding domain ambt_01950 PF00696 Amino acid kinase family ambt_01950 PF00742 Homoserine dehydrogenase ambt_01950 PF13840 ACT domain ambt_01950 PF01842 ACT domain ambt_01950 PF03447 Homoserine dehydrogenase, NAD binding domain ambt_01955 PF00288 GHMP kinases N terminal domain ambt_01955 PF08544 GHMP kinases C terminal ambt_01960 PF14821 Threonine synthase N terminus ambt_01960 PF00291 Pyridoxal-phosphate dependent enzyme ambt_01965 PF03167 Uracil DNA glycosylase superfamily ambt_01975 PF00342 Phosphoglucose isomerase ambt_01980 PF00923 Transaldolase/Fructose-6-phosphate aldolase ambt_01985 PF03883 Peroxide stress protein YaaA ambt_01990 PF02798 Glutathione S-transferase, N-terminal domain ambt_01990 PF14834 Glutathione S-transferase, C-terminal domain ambt_02000 PF08787 Alginate lyase ambt_02010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ambt_02010 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_02025 PF02325 YGGT family ambt_02030 PF03807 NADP oxidoreductase coenzyme F420-dependent ambt_02030 PF14748 Pyrroline-5-carboxylate reductase dimerisation ambt_02035 PF01168 Alanine racemase, N-terminal domain ambt_02040 PF00437 Type II/IV secretion system protein ambt_02045 PF00437 Type II/IV secretion system protein ambt_02055 PF03652 Holliday junction resolvase ambt_02060 PF02622 Uncharacterized ACR, COG1678 ambt_02065 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ambt_02065 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ambt_02070 PF04452 RNA methyltransferase ambt_02080 PF00924 Mechanosensitive ion channel ambt_02080 PF05552 Conserved TM helix ambt_02095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ambt_02095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ambt_02100 PF01627 Hpt domain ambt_02100 PF18415 Histidine kinase receptor ArcB trans-membrane domain ambt_02100 PF00512 His Kinase A (phospho-acceptor) domain ambt_02100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_02100 PF00989 PAS fold ambt_02100 PF00072 Response regulator receiver domain ambt_02105 PF00158 Sigma-54 interaction domain ambt_02105 PF00072 Response regulator receiver domain ambt_02105 PF02954 Bacterial regulatory protein, Fis family ambt_02115 PF00990 Diguanylate cyclase, GGDEF domain ambt_02115 PF05230 MASE2 domain ambt_02120 PF08534 Redoxin ambt_02120 PF00462 Glutaredoxin ambt_02140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_02145 PF00873 AcrB/AcrD/AcrF family ambt_02150 PF01244 Membrane dipeptidase (Peptidase family M19) ambt_02160 PF02381 MraZ protein, putative antitoxin-like ambt_02165 PF01795 MraW methylase family ambt_02170 PF04999 Cell division protein FtsL ambt_02175 PF00905 Penicillin binding protein transpeptidase domain ambt_02175 PF03717 Penicillin-binding Protein dimerisation domain ambt_02180 PF08245 Mur ligase middle domain ambt_02180 PF01225 Mur ligase family, catalytic domain ambt_02180 PF02875 Mur ligase family, glutamate ligase domain ambt_02185 PF08245 Mur ligase middle domain ambt_02185 PF02875 Mur ligase family, glutamate ligase domain ambt_02185 PF01225 Mur ligase family, catalytic domain ambt_02190 PF00953 Glycosyl transferase family 4 ambt_02190 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ambt_02195 PF08245 Mur ligase middle domain ambt_02195 PF02875 Mur ligase family, glutamate ligase domain ambt_02200 PF01098 Cell cycle protein ambt_02205 PF03033 Glycosyltransferase family 28 N-terminal domain ambt_02205 PF04101 Glycosyltransferase family 28 C-terminal domain ambt_02210 PF02875 Mur ligase family, glutamate ligase domain ambt_02210 PF01225 Mur ligase family, catalytic domain ambt_02210 PF08245 Mur ligase middle domain ambt_02215 PF01820 D-ala D-ala ligase N-terminus ambt_02215 PF07478 D-ala D-ala ligase C-terminus ambt_02220 PF03799 Cell division protein FtsQ ambt_02220 PF08478 POTRA domain, FtsQ-type ambt_02225 PF02491 SHS2 domain inserted in FTSA ambt_02230 PF12327 FtsZ family, C-terminal domain ambt_02230 PF00091 Tubulin/FtsZ family, GTPase domain ambt_02235 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ambt_02240 PF01476 LysM domain ambt_02240 PF01551 Peptidase family M23 ambt_02240 PF08525 Opacity-associated protein A N-terminal motif ambt_02245 PF02810 SEC-C motif ambt_02245 PF07516 SecA Wing and Scaffold domain ambt_02245 PF01043 SecA preprotein cross-linking domain ambt_02245 PF07517 SecA DEAD-like domain ambt_02250 PF00293 NUDIX domain ambt_02255 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ambt_02265 PF07072 Cell division protein ambt_02270 PF01121 Dephospho-CoA kinase ambt_02275 PF06750 Bacterial Peptidase A24 N-terminal domain ambt_02275 PF01478 Type IV leader peptidase family ambt_02280 PF00482 Type II secretion system (T2SS), protein F ambt_02285 PF07963 Prokaryotic N-terminal methylation motif ambt_02290 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ambt_02290 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ambt_02300 PF01510 N-acetylmuramoyl-L-alanine amidase ambt_02310 PF00392 Bacterial regulatory proteins, gntR family ambt_02310 PF07729 FCD domain ambt_02315 PF00456 Transketolase, thiamine diphosphate binding domain ambt_02315 PF17831 Pyruvate dehydrogenase E1 component middle domain ambt_02320 PF02817 e3 binding domain ambt_02320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ambt_02320 PF00364 Biotin-requiring enzyme ambt_02325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ambt_02325 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_02335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_02335 PF03466 LysR substrate binding domain ambt_02340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_02345 PF00873 AcrB/AcrD/AcrF family ambt_02365 PF06945 Protein of unknown function (DUF1289) ambt_02385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ambt_02385 PF01842 ACT domain ambt_02385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ambt_02390 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ambt_02395 PF01812 5-formyltetrahydrofolate cyclo-ligase family ambt_02400 PF13188 PAS domain ambt_02400 PF00989 PAS fold ambt_02400 PF00512 His Kinase A (phospho-acceptor) domain ambt_02400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_02405 PF01156 Inosine-uridine preferring nucleoside hydrolase ambt_02410 PF00294 pfkB family carbohydrate kinase ambt_02415 PF03695 Uncharacterised protein family (UPF0149) ambt_02420 PF00557 Metallopeptidase family M24 ambt_02420 PF05195 Aminopeptidase P, N-terminal domain ambt_02425 PF01494 FAD binding domain ambt_02430 PF01494 FAD binding domain ambt_02445 PF00557 Metallopeptidase family M24 ambt_02445 PF01321 Creatinase/Prolidase N-terminal domain ambt_02455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_02455 PF03466 LysR substrate binding domain ambt_02460 PF08669 Glycine cleavage T-protein C-terminal barrel domain ambt_02460 PF01571 Aminomethyltransferase folate-binding domain ambt_02465 PF01597 Glycine cleavage H-protein ambt_02515 PF01609 Transposase DDE domain ambt_02515 PF13808 DDE_Tnp_1-associated ambt_02545 PF00326 Prolyl oligopeptidase family ambt_02550 PF00248 Aldo/keto reductase family ambt_02560 PF07690 Major Facilitator Superfamily ambt_02605 PF00271 Helicase conserved C-terminal domain ambt_02605 PF00270 DEAD/DEAH box helicase ambt_02610 PF06906 Protein of unknown function (DUF1272) ambt_02615 PF00892 EamA-like transporter family ambt_02620 PF12833 Helix-turn-helix domain ambt_02620 PF12852 Cupin ambt_02625 PF07995 Glucose / Sorbosone dehydrogenase ambt_02650 PF00005 ABC transporter ambt_02650 PF02687 FtsX-like permease family ambt_02650 PF12704 MacB-like periplasmic core domain ambt_02655 PF00005 ABC transporter ambt_02655 PF12704 MacB-like periplasmic core domain ambt_02655 PF02687 FtsX-like permease family ambt_02660 PF00072 Response regulator receiver domain ambt_02660 PF00158 Sigma-54 interaction domain ambt_02660 PF02954 Bacterial regulatory protein, Fis family ambt_02665 PF00512 His Kinase A (phospho-acceptor) domain ambt_02665 PF00989 PAS fold ambt_02665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_02680 PF07516 SecA Wing and Scaffold domain ambt_02680 PF02810 SEC-C motif ambt_02680 PF07517 SecA DEAD-like domain ambt_02680 PF01043 SecA preprotein cross-linking domain ambt_02685 PF11941 Domain of unknown function (DUF3459) ambt_02685 PF00128 Alpha amylase, catalytic domain ambt_02710 PF00571 CBS domain ambt_02725 PF01863 Protein of unknown function DUF45 ambt_02740 PF01810 LysE type translocator ambt_02745 PF00155 Aminotransferase class I and II ambt_02745 PF00392 Bacterial regulatory proteins, gntR family ambt_02760 PF12894 Anaphase-promoting complex subunit 4 WD40 domain ambt_02760 PF00400 WD domain, G-beta repeat ambt_02780 PF01556 DnaJ C terminal domain ambt_02780 PF00226 DnaJ domain ambt_02790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_02790 PF03466 LysR substrate binding domain ambt_02805 PF07152 YaeQ protein ambt_02810 PF09382 RQC domain ambt_02810 PF16124 RecQ zinc-binding ambt_02810 PF00270 DEAD/DEAH box helicase ambt_02810 PF00570 HRDC domain ambt_02810 PF00271 Helicase conserved C-terminal domain ambt_02815 PF03631 Virulence factor BrkB ambt_02820 PF17755 UvrA DNA-binding domain ambt_02825 PF01047 MarR family ambt_02830 PF13533 Biotin-lipoyl like ambt_02850 PF00593 TonB dependent receptor ambt_02850 PF07715 TonB-dependent Receptor Plug Domain ambt_02860 PF00561 alpha/beta hydrolase fold ambt_02865 PF00462 Glutaredoxin ambt_02870 PF01965 DJ-1/PfpI family ambt_02875 PF00106 short chain dehydrogenase ambt_02885 PF02659 Putative manganese efflux pump ambt_02890 PF01040 UbiA prenyltransferase family ambt_02895 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ambt_02900 PF00510 Cytochrome c oxidase subunit III ambt_02905 PF00115 Cytochrome C and Quinol oxidase polypeptide I ambt_02910 PF06481 COX Aromatic Rich Motif ambt_02910 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ambt_02955 PF11838 ERAP1-like C-terminal domain ambt_02955 PF01433 Peptidase family M1 domain ambt_02975 PF01258 Prokaryotic dksA/traR C4-type zinc finger ambt_02985 PF03965 Penicillinase repressor ambt_02990 PF01638 HxlR-like helix-turn-helix ambt_03005 PF00266 Aminotransferase class-V ambt_03025 PF07690 Major Facilitator Superfamily ambt_03030 PF00128 Alpha amylase, catalytic domain ambt_03075 PF01136 Peptidase family U32 ambt_03075 PF12392 Collagenase ambt_03080 PF03061 Thioesterase superfamily ambt_03090 PF12633 Adenylate cyclase NT domain ambt_03090 PF01295 Adenylate cyclase, class-I ambt_03095 PF00881 Nitroreductase family ambt_03100 PF17158 Membrane-associated sensor, integral membrane domain ambt_03100 PF00990 Diguanylate cyclase, GGDEF domain ambt_03110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ambt_03140 PF03969 AFG1-like ATPase ambt_03150 PF00578 AhpC/TSA family ambt_03155 PF01738 Dienelactone hydrolase family ambt_03165 PF07660 Secretin and TonB N terminus short domain ambt_03165 PF07715 TonB-dependent Receptor Plug Domain ambt_03165 PF00593 TonB dependent receptor ambt_03170 PF01244 Membrane dipeptidase (Peptidase family M19) ambt_03190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ambt_03190 PF02770 Acyl-CoA dehydrogenase, middle domain ambt_03190 PF18158 Adaptive response protein AidB N-terminal domain ambt_03230 PF00072 Response regulator receiver domain ambt_03230 PF04397 LytTr DNA-binding domain ambt_03235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_03235 PF07694 5TMR of 5TMR-LYT ambt_03235 PF06580 Histidine kinase ambt_03250 PF00483 Nucleotidyl transferase ambt_03255 PF00246 Zinc carboxypeptidase ambt_03265 PF08443 RimK-like ATP-grasp domain ambt_03265 PF18030 RimK PreATP-grasp domain ambt_03275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_03275 PF00529 HlyD membrane-fusion protein of T1SS ambt_03280 PF00873 AcrB/AcrD/AcrF family ambt_03285 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ambt_03285 PF02321 Outer membrane efflux protein ambt_03295 PF09278 MerR, DNA binding ambt_03295 PF00376 MerR family regulatory protein ambt_03300 PF05971 RNA methyltransferase ambt_03310 PF05360 yiaA/B two helix domain ambt_03320 PF07715 TonB-dependent Receptor Plug Domain ambt_03345 PF07715 TonB-dependent Receptor Plug Domain ambt_03345 PF00593 TonB dependent receptor ambt_03350 PF07715 TonB-dependent Receptor Plug Domain ambt_03350 PF00593 TonB dependent receptor ambt_03375 PF00069 Protein kinase domain ambt_03375 PF03793 PASTA domain ambt_03405 PF00037 4Fe-4S binding domain ambt_03405 PF11953 Domain of unknown function (DUF3470) ambt_03410 PF08032 RNA 2'-O ribose methyltransferase substrate binding ambt_03410 PF00588 SpoU rRNA Methylase family ambt_03415 PF01926 50S ribosome-binding GTPase ambt_03455 PF00356 Bacterial regulatory proteins, lacI family ambt_03465 PF00265 Thymidine kinase ambt_03485 PF09317 Domain of unknown function (DUF1974) ambt_03485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ambt_03485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ambt_03485 PF02770 Acyl-CoA dehydrogenase, middle domain ambt_03515 PF03279 Bacterial lipid A biosynthesis acyltransferase ambt_03525 PF08335 GlnD PII-uridylyltransferase ambt_03525 PF03710 Glutamate-ammonia ligase adenylyltransferase ambt_03535 PF01541 GIY-YIG catalytic domain ambt_03540 PF01467 Cytidylyltransferase-like ambt_03540 PF00294 pfkB family carbohydrate kinase ambt_03545 PF01471 Putative peptidoglycan binding domain ambt_03545 PF13401 AAA domain ambt_03555 PF13614 AAA domain ambt_03570 PF02397 Bacterial sugar transferase ambt_03600 PF00535 Glycosyl transferase family 2 ambt_03605 PF00534 Glycosyl transferases group 1 ambt_03605 PF13439 Glycosyltransferase Family 4 ambt_03615 PF01757 Acyltransferase family ambt_03640 PF13579 Glycosyl transferase 4-like domain ambt_03640 PF00534 Glycosyl transferases group 1 ambt_03645 PF00534 Glycosyl transferases group 1 ambt_03665 PF00132 Bacterial transferase hexapeptide (six repeats) ambt_03695 PF13180 PDZ domain ambt_03705 PF01370 NAD dependent epimerase/dehydratase family ambt_03715 PF01274 Malate synthase ambt_03720 PF03466 LysR substrate binding domain ambt_03720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_03725 PF00463 Isocitrate lyase family ambt_03730 PF00072 Response regulator receiver domain ambt_03735 PF00245 Alkaline phosphatase ambt_03740 PF04960 Glutaminase ambt_03755 PF03738 Glutathionylspermidine synthase preATP-grasp ambt_03780 PF04012 PspA/IM30 family ambt_03785 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) ambt_03795 PF02547 Queuosine biosynthesis protein ambt_03800 PF01702 Queuine tRNA-ribosyltransferase ambt_03805 PF02699 Preprotein translocase subunit ambt_03810 PF02355 Protein export membrane protein ambt_03810 PF07549 SecD/SecF GG Motif ambt_03810 PF13721 SecD export protein N-terminal TM region ambt_03815 PF07549 SecD/SecF GG Motif ambt_03815 PF02355 Protein export membrane protein ambt_03830 PF03707 Bacterial signalling protein N terminal repeat ambt_03830 PF00563 EAL domain ambt_03830 PF00990 Diguanylate cyclase, GGDEF domain ambt_03845 PF00459 Inositol monophosphatase family ambt_03850 PF00588 SpoU rRNA Methylase family ambt_03855 PF00132 Bacterial transferase hexapeptide (six repeats) ambt_03890 PF13205 Bacterial Ig-like domain ambt_03890 PF18058 SbsC C-terminal domain ambt_03905 PF02082 Transcriptional regulator ambt_03910 PF00266 Aminotransferase class-V ambt_03915 PF01458 Uncharacterized protein family (UPF0051) ambt_03920 PF00005 ABC transporter ambt_03925 PF01458 Uncharacterized protein family (UPF0051) ambt_03930 PF00266 Aminotransferase class-V ambt_03935 PF01521 Iron-sulphur cluster biosynthesis ambt_03940 PF01883 Iron-sulfur cluster assembly protein ambt_03945 PF02657 Fe-S metabolism associated domain ambt_03950 PF00334 Nucleoside diphosphate kinase ambt_03955 PF04055 Radical SAM superfamily ambt_03965 PF13464 Domain of unknown function (DUF4115) ambt_03970 PF04551 GcpE protein ambt_03975 PF03129 Anticodon binding domain ambt_03975 PF13393 Histidyl-tRNA synthetase ambt_03980 PF09976 Tetratricopeptide repeat-like domain ambt_03985 PF13360 PQQ-like domain ambt_03990 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ambt_03990 PF01926 50S ribosome-binding GTPase ambt_04000 PF02601 Exonuclease VII, large subunit ambt_04000 PF13742 OB-fold nucleic acid binding domain ambt_04005 PF00478 IMP dehydrogenase / GMP reductase domain ambt_04005 PF00571 CBS domain ambt_04010 PF00958 GMP synthase C terminal domain ambt_04010 PF00117 Glutamine amidotransferase class-I ambt_04010 PF02540 NAD synthase ambt_04015 PF00672 HAMP domain ambt_04015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_04020 PF00850 Histone deacetylase domain ambt_04025 PF02253 Phospholipase A1 ambt_04030 PF00753 Metallo-beta-lactamase superfamily ambt_04030 PF12706 Beta-lactamase superfamily domain ambt_04035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ambt_04035 PF03129 Anticodon binding domain ambt_04040 PF01980 tRNA-methyltransferase O ambt_04040 PF18389 TrmO C-terminal domain ambt_04050 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ambt_04050 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ambt_04055 PF05698 Bacterial trigger factor protein (TF) C-terminus ambt_04055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ambt_04055 PF05697 Bacterial trigger factor protein (TF) ambt_04060 PF00574 Clp protease ambt_04065 PF07724 AAA domain (Cdc48 subfamily) ambt_04065 PF06689 ClpX C4-type zinc finger ambt_04065 PF10431 C-terminal, D2-small domain, of ClpB protein ambt_04070 PF02190 ATP-dependent protease La (LON) substrate-binding domain ambt_04070 PF00004 ATPase family associated with various cellular activities (AAA) ambt_04070 PF05362 Lon protease (S16) C-terminal proteolytic domain ambt_04075 PF00216 Bacterial DNA-binding protein ambt_04085 PF01546 Peptidase family M20/M25/M40 ambt_04085 PF07687 Peptidase dimerisation domain ambt_04100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_04100 PF03466 LysR substrate binding domain ambt_04105 PF01758 Sodium Bile acid symporter family ambt_04120 PF00106 short chain dehydrogenase ambt_04125 PF01649 Ribosomal protein S20 ambt_04130 PF03023 Lipid II flippase MurJ ambt_04135 PF01687 Riboflavin kinase ambt_04135 PF06574 FAD synthetase ambt_04140 PF08264 Anticodon-binding domain of tRNA ambt_04140 PF00133 tRNA synthetases class I (I, L, M and V) ambt_04140 PF06827 Zinc finger found in FPG and IleRS ambt_04145 PF01252 Signal peptidase (SPase) II ambt_04150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ambt_04155 PF02401 LytB protein ambt_04180 PF07963 Prokaryotic N-terminal methylation motif ambt_04180 PF00114 Pilin (bacterial filament) ambt_04195 PF07963 Prokaryotic N-terminal methylation motif ambt_04205 PF07963 Prokaryotic N-terminal methylation motif ambt_04205 PF00114 Pilin (bacterial filament) ambt_04215 PF02540 NAD synthase ambt_04220 PF00543 Nitrogen regulatory protein P-II ambt_04225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ambt_04235 PF03937 Flavinator of succinate dehydrogenase ambt_04250 PF00890 FAD binding domain ambt_04250 PF02910 Fumarate reductase flavoprotein C-term ambt_04255 PF08281 Sigma-70, region 4 ambt_04255 PF04542 Sigma-70 region 2 ambt_04265 PF17188 MucB/RseB C-terminal domain ambt_04265 PF03888 MucB/RseB N-terminal domain ambt_04280 PF03144 Elongation factor Tu domain 2 ambt_04280 PF06421 GTP-binding protein LepA C-terminus ambt_04280 PF00679 Elongation factor G C-terminus ambt_04280 PF00009 Elongation factor Tu GTP binding domain ambt_04285 PF10502 Signal peptidase, peptidase S26 ambt_04290 PF14622 Ribonuclease-III-like ambt_04290 PF00035 Double-stranded RNA binding motif ambt_04295 PF01926 50S ribosome-binding GTPase ambt_04295 PF07650 KH domain ambt_04300 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ambt_04300 PF01243 Pyridoxamine 5'-phosphate oxidase ambt_04305 PF01026 TatD related DNase ambt_04315 PF18429 Domain of unknown function (DUF5609) ambt_04325 PF18073 Rubredoxin metal binding domain ambt_04335 PF12848 ABC transporter ambt_04335 PF00005 ABC transporter ambt_04340 PF14602 Hexapeptide repeat of succinyl-transferase ambt_04340 PF00132 Bacterial transferase hexapeptide (six repeats) ambt_04340 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ambt_04345 PF00464 Serine hydroxymethyltransferase ambt_04350 PF03477 ATP cone domain ambt_04355 PF01872 RibD C-terminal domain ambt_04355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ambt_04360 PF00677 Lumazine binding domain ambt_04365 PF00925 GTP cyclohydrolase II ambt_04365 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ambt_04370 PF00885 6,7-dimethyl-8-ribityllumazine synthase ambt_04375 PF01029 NusB family ambt_04380 PF00586 AIR synthase related protein, N-terminal domain ambt_04380 PF02769 AIR synthase related protein, C-terminal domain ambt_04385 PF04608 Phosphatidylglycerophosphatase A ambt_04390 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ambt_04390 PF02779 Transketolase, pyrimidine binding domain ambt_04390 PF02780 Transketolase, C-terminal domain ambt_04395 PF00348 Polyprenyl synthetase ambt_04400 PF02609 Exonuclease VII small subunit ambt_04405 PF01618 MotA/TolQ/ExbB proton channel family ambt_04410 PF00691 OmpA family ambt_04410 PF13677 Membrane MotB of proton-channel complex MotA/MotB ambt_04430 PF00106 short chain dehydrogenase ambt_04445 PF04545 Sigma-70, region 4 ambt_04445 PF04542 Sigma-70 region 2 ambt_04455 PF13525 Outer membrane lipoprotein ambt_04460 PF01479 S4 domain ambt_04460 PF00849 RNA pseudouridylate synthase ambt_04470 PF02861 Clp amino terminal domain, pathogenicity island component ambt_04470 PF17871 AAA lid domain ambt_04470 PF10431 C-terminal, D2-small domain, of ClpB protein ambt_04470 PF00004 ATPase family associated with various cellular activities (AAA) ambt_04470 PF07724 AAA domain (Cdc48 subfamily) ambt_04490 PF01066 CDP-alcohol phosphatidyltransferase ambt_04505 PF00563 EAL domain ambt_04505 PF01590 GAF domain ambt_04505 PF00990 Diguanylate cyclase, GGDEF domain ambt_04505 PF00360 Phytochrome region ambt_04525 PF00400 WD domain, G-beta repeat ambt_04525 PF12894 Anaphase-promoting complex subunit 4 WD40 domain ambt_04535 PF05114 Protein of unknown function (DUF692) ambt_04545 PF00156 Phosphoribosyl transferase domain ambt_04550 PF12169 DNA polymerase III subunits gamma and tau domain III ambt_04550 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ambt_04550 PF12170 DNA polymerase III tau subunit V interacting with alpha ambt_04555 PF02575 YbaB/EbfC DNA-binding family ambt_04580 PF13662 Toprim domain ambt_04580 PF02132 RecR protein ambt_04585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_04585 PF00183 Hsp90 protein ambt_04590 PF05191 Adenylate kinase, active site lid ambt_04605 PF13340 Putative transposase of IS4/5 family (DUF4096) ambt_04610 PF00593 TonB dependent receptor ambt_04610 PF07715 TonB-dependent Receptor Plug Domain ambt_04615 PF10502 Signal peptidase, peptidase S26 ambt_04630 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system ambt_04640 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ambt_04640 PF01502 Phosphoribosyl-AMP cyclohydrolase ambt_04645 PF00977 Histidine biosynthesis protein ambt_04650 PF00977 Histidine biosynthesis protein ambt_04655 PF00117 Glutamine amidotransferase class-I ambt_04660 PF00475 Imidazoleglycerol-phosphate dehydratase ambt_04665 PF00155 Aminotransferase class I and II ambt_04670 PF00815 Histidinol dehydrogenase ambt_04675 PF08029 HisG, C-terminal domain ambt_04675 PF01634 ATP phosphoribosyltransferase ambt_04730 PF00128 Alpha amylase, catalytic domain ambt_04735 PF06733 DEAD_2 ambt_04735 PF13307 Helicase C-terminal domain ambt_04740 PF00814 Glycoprotease family ambt_04755 PF12697 Alpha/beta hydrolase family ambt_04760 PF13193 AMP-binding enzyme C-terminal domain ambt_04760 PF00501 AMP-binding enzyme ambt_04765 PF00570 HRDC domain ambt_04765 PF01612 3'-5' exonuclease ambt_04770 PF05166 YcgL domain ambt_04780 PF01557 Fumarylacetoacetate (FAA) hydrolase family ambt_04785 PF03692 Putative zinc- or iron-chelating domain ambt_04790 PF13302 Acetyltransferase (GNAT) domain ambt_04795 PF02600 Disulfide bond formation protein DsbB ambt_04800 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ambt_04805 PF00392 Bacterial regulatory proteins, gntR family ambt_04805 PF07840 FadR C-terminal domain ambt_04815 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ambt_04815 PF00326 Prolyl oligopeptidase family ambt_04845 PF04286 Protein of unknown function (DUF445) ambt_04850 PF00440 Bacterial regulatory proteins, tetR family ambt_04870 PF00732 GMC oxidoreductase ambt_04870 PF05199 GMC oxidoreductase ambt_04875 PF00440 Bacterial regulatory proteins, tetR family ambt_04875 PF02909 Tetracyclin repressor-like, C-terminal domain ambt_04880 PF00378 Enoyl-CoA hydratase/isomerase ambt_04885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ambt_04885 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_04900 PF00106 short chain dehydrogenase ambt_04910 PF00501 AMP-binding enzyme ambt_04920 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ambt_04930 PF00535 Glycosyl transferase family 2 ambt_04950 PF00512 His Kinase A (phospho-acceptor) domain ambt_04950 PF08521 Two-component sensor kinase N-terminal ambt_04950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_04955 PF00486 Transcriptional regulatory protein, C terminal ambt_04955 PF00072 Response regulator receiver domain ambt_04965 PF00487 Fatty acid desaturase ambt_04970 PF00970 Oxidoreductase FAD-binding domain ambt_04970 PF00175 Oxidoreductase NAD-binding domain ambt_04970 PF00111 2Fe-2S iron-sulfur cluster binding domain ambt_04990 PF04315 Elongation factor P hydroxylase ambt_05020 PF01266 FAD dependent oxidoreductase ambt_05020 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ambt_05025 PF17151 Periplasmic sensor domain ambt_05025 PF00990 Diguanylate cyclase, GGDEF domain ambt_05030 PF00109 Beta-ketoacyl synthase, N-terminal domain ambt_05030 PF02801 Beta-ketoacyl synthase, C-terminal domain ambt_05040 PF00596 Class II Aldolase and Adducin N-terminal domain ambt_05045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ambt_05045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ambt_05045 PF11890 Domain of unknown function (DUF3410) ambt_05050 PF02774 Semialdehyde dehydrogenase, dimerisation domain ambt_05050 PF01118 Semialdehyde dehydrogenase, NAD binding domain ambt_05060 PF01416 tRNA pseudouridine synthase ambt_05065 PF01039 Carboxyl transferase domain ambt_05065 PF17848 Acetyl-coA carboxylase zinc finger domain ambt_05070 PF08245 Mur ligase middle domain ambt_05070 PF02875 Mur ligase family, glutamate ligase domain ambt_05075 PF05036 Sporulation related domain ambt_05080 PF02674 Colicin V production protein ambt_05085 PF00156 Phosphoribosyl transferase domain ambt_05095 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ambt_05110 PF04336 Acyl carrier protein phosphodiesterase ambt_05115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_05115 PF03466 LysR substrate binding domain ambt_05120 PF08240 Alcohol dehydrogenase GroES-like domain ambt_05120 PF00107 Zinc-binding dehydrogenase ambt_05125 PF05426 Alginate lyase ambt_05125 PF07940 Heparinase II/III-like protein ambt_05130 PF00111 2Fe-2S iron-sulfur cluster binding domain ambt_05130 PF01799 [2Fe-2S] binding domain ambt_05135 PF00941 FAD binding domain in molybdopterin dehydrogenase ambt_05135 PF03450 CO dehydrogenase flavoprotein C-terminal domain ambt_05140 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ambt_05140 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ambt_05155 PF01145 SPFH domain / Band 7 family ambt_05155 PF15975 Flotillin ambt_05160 PF15975 Flotillin ambt_05160 PF01145 SPFH domain / Band 7 family ambt_05175 PF00245 Alkaline phosphatase ambt_05180 PF00245 Alkaline phosphatase ambt_05185 PF00149 Calcineurin-like phosphoesterase ambt_05190 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ambt_05195 PF01406 tRNA synthetases class I (C) catalytic domain ambt_05195 PF09190 DALR domain ambt_05200 PF00593 TonB dependent receptor ambt_05200 PF07715 TonB-dependent Receptor Plug Domain ambt_05210 PF01464 Transglycosylase SLT domain ambt_05210 PF01476 LysM domain ambt_05215 PF00753 Metallo-beta-lactamase superfamily ambt_05215 PF16123 Hydroxyacylglutathione hydrolase C-terminus ambt_05220 PF08241 Methyltransferase domain ambt_05225 PF09334 tRNA synthetases class I (M) ambt_05225 PF01588 Putative tRNA binding domain ambt_05225 PF08264 Anticodon-binding domain of tRNA ambt_05230 PF10609 NUBPL iron-transfer P-loop NTPase ambt_05235 PF00692 dUTPase ambt_05240 PF00939 Sodium:sulfate symporter transmembrane region ambt_05325 PF12167 Arm DNA-binding domain ambt_05325 PF00589 Phage integrase family ambt_05360 PF02661 Fic/DOC family ambt_05360 PF13784 Fic/DOC family N-terminal ambt_05375 PF01420 Type I restriction modification DNA specificity domain ambt_05385 PF00665 Integrase core domain ambt_05390 PF00665 Integrase core domain ambt_05395 PF01695 IstB-like ATP binding protein ambt_05430 PF00665 Integrase core domain ambt_05435 PF01695 IstB-like ATP binding protein ambt_05455 PF01145 SPFH domain / Band 7 family ambt_05475 PF00199 Catalase ambt_05475 PF06628 Catalase-related immune-responsive ambt_05490 PF00672 HAMP domain ambt_05490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_05500 PF13472 GDSL-like Lipase/Acylhydrolase family ambt_05500 PF07859 alpha/beta hydrolase fold ambt_05505 PF01266 FAD dependent oxidoreductase ambt_05510 PF02112 cAMP phosphodiesterases class-II ambt_05515 PF07690 Major Facilitator Superfamily ambt_05520 PF01156 Inosine-uridine preferring nucleoside hydrolase ambt_05525 PF01979 Amidohydrolase family ambt_05555 PF00512 His Kinase A (phospho-acceptor) domain ambt_05555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_05555 PF00672 HAMP domain ambt_05560 PF00486 Transcriptional regulatory protein, C terminal ambt_05560 PF00072 Response regulator receiver domain ambt_05570 PF00990 Diguanylate cyclase, GGDEF domain ambt_05575 PF00080 Copper/zinc superoxide dismutase (SODC) ambt_05585 PF02566 OsmC-like protein ambt_05590 PF01625 Peptide methionine sulfoxide reductase ambt_05600 PF12804 MobA-like NTP transferase domain ambt_05615 PF00563 EAL domain ambt_05615 PF00990 Diguanylate cyclase, GGDEF domain ambt_05615 PF03707 Bacterial signalling protein N terminal repeat ambt_05635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ambt_05635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ambt_05640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ambt_05640 PF13378 Enolase C-terminal domain-like ambt_05645 PF00356 Bacterial regulatory proteins, lacI family ambt_05660 PF13533 Biotin-lipoyl like ambt_05695 PF00378 Enoyl-CoA hydratase/isomerase ambt_05700 PF11838 ERAP1-like C-terminal domain ambt_05700 PF01433 Peptidase family M1 domain ambt_05705 PF04231 Endonuclease I ambt_05720 PF00672 HAMP domain ambt_05720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_05720 PF00512 His Kinase A (phospho-acceptor) domain ambt_05720 PF01627 Hpt domain ambt_05720 PF00072 Response regulator receiver domain ambt_05720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ambt_05725 PF09347 Domain of unknown function (DUF1989) ambt_05750 PF00072 Response regulator receiver domain ambt_05750 PF00486 Transcriptional regulatory protein, C terminal ambt_05755 PF00512 His Kinase A (phospho-acceptor) domain ambt_05755 PF00672 HAMP domain ambt_05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_05800 PF01048 Phosphorylase superfamily ambt_05805 PF02887 Pyruvate kinase, alpha/beta domain ambt_05805 PF00224 Pyruvate kinase, barrel domain ambt_05810 PF01380 SIS domain ambt_05810 PF01418 Helix-turn-helix domain, rpiR family ambt_05815 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ambt_05815 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ambt_05820 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ambt_05825 PF00920 Dehydratase family ambt_05830 PF02685 Glucokinase ambt_05835 PF01081 KDPG and KHG aldolase ambt_05840 PF01263 Aldose 1-epimerase ambt_05845 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ambt_05845 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ambt_05850 PF02446 4-alpha-glucanotransferase ambt_05855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ambt_05855 PF02806 Alpha amylase, C-terminal all-beta domain ambt_05855 PF00128 Alpha amylase, catalytic domain ambt_05860 PF00128 Alpha amylase, catalytic domain ambt_05860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ambt_05865 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ambt_05865 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ambt_05870 PF01641 SelR domain ambt_05880 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ambt_05880 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ambt_05885 PF00246 Zinc carboxypeptidase ambt_05885 PF18027 Cytosolic carboxypeptidase N-terminal domain ambt_05890 PF01235 Sodium:alanine symporter family ambt_05900 PF07023 Protein of unknown function (DUF1315) ambt_05920 PF07043 Protein of unknown function (DUF1328) ambt_05950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_05950 PF00072 Response regulator receiver domain ambt_05950 PF09308 LuxQ, periplasmic ambt_05950 PF00512 His Kinase A (phospho-acceptor) domain ambt_05955 PF00072 Response regulator receiver domain ambt_05960 PF00512 His Kinase A (phospho-acceptor) domain ambt_05960 PF08446 PAS fold ambt_05960 PF00360 Phytochrome region ambt_05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_05960 PF01590 GAF domain ambt_05970 PF00072 Response regulator receiver domain ambt_05970 PF00158 Sigma-54 interaction domain ambt_05970 PF02954 Bacterial regulatory protein, Fis family ambt_05985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_05985 PF03466 LysR substrate binding domain ambt_05995 PF01022 Bacterial regulatory protein, arsR family ambt_06015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_06015 PF03466 LysR substrate binding domain ambt_06030 PF04337 Protein of unknown function, DUF480 ambt_06035 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ambt_06035 PF17770 Ribonuclease J C-terminal domain ambt_06035 PF12706 Beta-lactamase superfamily domain ambt_06040 PF03707 Bacterial signalling protein N terminal repeat ambt_06040 PF00990 Diguanylate cyclase, GGDEF domain ambt_06040 PF00563 EAL domain ambt_06045 PF00501 AMP-binding enzyme ambt_06055 PF17946 RecC C-terminal domain ambt_06060 PF13361 UvrD-like helicase C-terminal domain ambt_06060 PF12705 PD-(D/E)XK nuclease superfamily ambt_06060 PF00580 UvrD/REP helicase N-terminal domain ambt_06065 PF13538 UvrD-like helicase C-terminal domain ambt_06085 PF00155 Aminotransferase class I and II ambt_06100 PF03435 Saccharopine dehydrogenase NADP binding domain ambt_06105 PF00155 Aminotransferase class I and II ambt_06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_06115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ambt_06115 PF00512 His Kinase A (phospho-acceptor) domain ambt_06115 PF00072 Response regulator receiver domain ambt_06115 PF01627 Hpt domain ambt_06115 PF00672 HAMP domain ambt_06150 PF01609 Transposase DDE domain ambt_06150 PF13808 DDE_Tnp_1-associated ambt_06155 PF01609 Transposase DDE domain ambt_06155 PF13808 DDE_Tnp_1-associated ambt_06160 PF01609 Transposase DDE domain ambt_06160 PF13808 DDE_Tnp_1-associated ambt_06170 PF13808 DDE_Tnp_1-associated ambt_06170 PF01609 Transposase DDE domain ambt_06245 PF02371 Transposase IS116/IS110/IS902 family ambt_06245 PF01548 Transposase ambt_06400 PF12697 Alpha/beta hydrolase family ambt_06465 PF00899 ThiF family ambt_06470 PF00994 Probable molybdopterin binding domain ambt_06475 PF01967 MoaC family ambt_06480 PF02597 ThiS family ambt_06485 PF02391 MoaE protein ambt_06495 PF00528 Binding-protein-dependent transport system inner membrane component ambt_06500 PF00005 ABC transporter ambt_06500 PF03459 TOBE domain ambt_06505 PF06969 HemN C-terminal domain ambt_06505 PF04055 Radical SAM superfamily ambt_06530 PF00593 TonB dependent receptor ambt_06530 PF07715 TonB-dependent Receptor Plug Domain ambt_06540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ambt_06540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ambt_06540 PF02770 Acyl-CoA dehydrogenase, middle domain ambt_06550 PF08240 Alcohol dehydrogenase GroES-like domain ambt_06550 PF00107 Zinc-binding dehydrogenase ambt_06570 PF00561 alpha/beta hydrolase fold ambt_06575 PF00378 Enoyl-CoA hydratase/isomerase ambt_06575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ambt_06575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ambt_06580 PF02803 Thiolase, C-terminal domain ambt_06580 PF00108 Thiolase, N-terminal domain ambt_06585 PF12806 Acetyl-CoA dehydrogenase C-terminal like ambt_06585 PF02770 Acyl-CoA dehydrogenase, middle domain ambt_06585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ambt_06585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ambt_06590 PF00561 alpha/beta hydrolase fold ambt_06600 PF04198 Putative sugar-binding domain ambt_06605 PF13419 Haloacid dehalogenase-like hydrolase ambt_06615 PF01232 Mannitol dehydrogenase Rossmann domain ambt_06615 PF08125 Mannitol dehydrogenase C-terminal domain ambt_06625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_06625 PF03466 LysR substrate binding domain ambt_06630 PF01575 MaoC like domain ambt_06635 PF00924 Mechanosensitive ion channel ambt_06655 PF00924 Mechanosensitive ion channel ambt_06655 PF05552 Conserved TM helix ambt_06660 PF07715 TonB-dependent Receptor Plug Domain ambt_06660 PF00593 TonB dependent receptor ambt_06665 PF01329 Pterin 4 alpha carbinolamine dehydratase ambt_06670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_06670 PF00512 His Kinase A (phospho-acceptor) domain ambt_06670 PF18415 Histidine kinase receptor ArcB trans-membrane domain ambt_06670 PF01627 Hpt domain ambt_06670 PF00989 PAS fold ambt_06670 PF00072 Response regulator receiver domain ambt_06675 PF00072 Response regulator receiver domain ambt_06680 PF17384 RimP C-terminal SH3 domain ambt_06680 PF02576 RimP N-terminal domain ambt_06685 PF08529 NusA N-terminal domain ambt_06685 PF00575 S1 RNA binding domain ambt_06685 PF13184 NusA-like KH domain ambt_06690 PF08364 Bacterial translation initiation factor IF-2 associated region ambt_06690 PF11987 Translation-initiation factor 2 ambt_06690 PF00009 Elongation factor Tu GTP binding domain ambt_06690 PF04760 Translation initiation factor IF-2, N-terminal region ambt_06695 PF02033 Ribosome-binding factor A ambt_06700 PF01509 TruB family pseudouridylate synthase (N terminal domain) ambt_06700 PF16198 tRNA pseudouridylate synthase B C-terminal domain ambt_06700 PF09157 Pseudouridine synthase II TruB, C-terminal ambt_06705 PF00312 Ribosomal protein S15 ambt_06710 PF05987 Bacterial protein of unknown function (DUF898) ambt_06715 PF01435 Peptidase family M48 ambt_06720 PF08448 PAS fold ambt_06720 PF00990 Diguanylate cyclase, GGDEF domain ambt_06725 PF12697 Alpha/beta hydrolase family ambt_06735 PF00583 Acetyltransferase (GNAT) family ambt_06735 PF00795 Carbon-nitrogen hydrolase ambt_06760 PF00578 AhpC/TSA family ambt_06760 PF10417 C-terminal domain of 1-Cys peroxiredoxin ambt_06765 PF13192 Thioredoxin domain ambt_06765 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_06795 PF04055 Radical SAM superfamily ambt_06795 PF08497 Radical SAM N-terminal ambt_06795 PF11842 Domain of unknown function (DUF3362) ambt_06815 PF00593 TonB dependent receptor ambt_06815 PF07715 TonB-dependent Receptor Plug Domain ambt_06820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ambt_06820 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_06830 PF13416 Bacterial extracellular solute-binding protein ambt_06835 PF00528 Binding-protein-dependent transport system inner membrane component ambt_06840 PF00005 ABC transporter ambt_06845 PF01066 CDP-alcohol phosphatidyltransferase ambt_06860 PF00563 EAL domain ambt_06860 PF01590 GAF domain ambt_06860 PF00990 Diguanylate cyclase, GGDEF domain ambt_06860 PF00360 Phytochrome region ambt_06865 PF16197 Ketoacyl-synthetase C-terminal extension ambt_06865 PF08659 KR domain ambt_06865 PF02801 Beta-ketoacyl synthase, C-terminal domain ambt_06865 PF00109 Beta-ketoacyl synthase, N-terminal domain ambt_06865 PF00698 Acyl transferase domain ambt_06865 PF08990 Erythronolide synthase docking ambt_06865 PF08240 Alcohol dehydrogenase GroES-like domain ambt_06865 PF14765 Polyketide synthase dehydratase ambt_06865 PF09277 Erythronolide synthase, docking ambt_06865 PF00550 Phosphopantetheine attachment site ambt_06890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_06890 PF03466 LysR substrate binding domain ambt_06920 PF12146 Serine aminopeptidase, S33 ambt_06925 PF08281 Sigma-70, region 4 ambt_06925 PF04542 Sigma-70 region 2 ambt_06935 PF00171 Aldehyde dehydrogenase family ambt_06940 PF00732 GMC oxidoreductase ambt_06940 PF05199 GMC oxidoreductase ambt_06960 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ambt_06970 PF07690 Major Facilitator Superfamily ambt_06975 PF13340 Putative transposase of IS4/5 family (DUF4096) ambt_06980 PF07715 TonB-dependent Receptor Plug Domain ambt_06980 PF00593 TonB dependent receptor ambt_06995 PF00589 Phage integrase family ambt_06995 PF14659 Phage integrase, N-terminal SAM-like domain ambt_07015 PF05840 Bacteriophage replication gene A protein (GPA) ambt_07020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ambt_07020 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_07025 PF01668 SmpB protein ambt_07030 PF03364 Polyketide cyclase / dehydrase and lipid transport ambt_07035 PF03658 RnfH family Ubiquitin ambt_07045 PF02028 BCCT, betaine/carnitine/choline family transporter ambt_07050 PF07715 TonB-dependent Receptor Plug Domain ambt_07050 PF00593 TonB dependent receptor ambt_07055 PF13181 Tetratricopeptide repeat ambt_07060 PF00231 ATP synthase ambt_07065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ambt_07065 PF02874 ATP synthase alpha/beta family, beta-barrel domain ambt_07065 PF00306 ATP synthase alpha/beta chain, C terminal domain ambt_07070 PF00430 ATP synthase B/B' CF(0) ambt_07075 PF00137 ATP synthase subunit C ambt_07080 PF00119 ATP synthase A chain ambt_07100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ambt_07100 PF02874 ATP synthase alpha/beta family, beta-barrel domain ambt_07125 PF07690 Major Facilitator Superfamily ambt_07130 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_07130 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ambt_07135 PF03544 Gram-negative bacterial TonB protein C-terminal ambt_07150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ambt_07155 PF07719 Tetratricopeptide repeat ambt_07155 PF13181 Tetratricopeptide repeat ambt_07170 PF02463 RecF/RecN/SMC N terminal domain ambt_07170 PF06470 SMC proteins Flexible Hinge Domain ambt_07175 PF04354 ZipA, C-terminal FtsZ-binding domain ambt_07180 PF03120 NAD-dependent DNA ligase OB-fold domain ambt_07180 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ambt_07180 PF12826 Helix-hairpin-helix motif ambt_07180 PF01653 NAD-dependent DNA ligase adenylation domain ambt_07180 PF00533 BRCA1 C Terminus (BRCT) domain ambt_07185 PF01653 NAD-dependent DNA ligase adenylation domain ambt_07185 PF00533 BRCA1 C Terminus (BRCT) domain ambt_07185 PF03120 NAD-dependent DNA ligase OB-fold domain ambt_07190 PF00512 His Kinase A (phospho-acceptor) domain ambt_07190 PF00672 HAMP domain ambt_07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_07195 PF00072 Response regulator receiver domain ambt_07195 PF00486 Transcriptional regulatory protein, C terminal ambt_07215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_07220 PF00873 AcrB/AcrD/AcrF family ambt_07255 PF07693 KAP family P-loop domain ambt_07265 PF00403 Heavy-metal-associated domain ambt_07320 PF00394 Multicopper oxidase ambt_07320 PF07731 Multicopper oxidase ambt_07320 PF07732 Multicopper oxidase ambt_07335 PF13411 MerR HTH family regulatory protein ambt_07350 PF01545 Cation efflux family ambt_07350 PF16916 Dimerisation domain of Zinc Transporter ambt_07365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_07365 PF00529 HlyD membrane-fusion protein of T1SS ambt_07370 PF00873 AcrB/AcrD/AcrF family ambt_07375 PF04191 Phospholipid methyltransferase ambt_07465 PF12826 Helix-hairpin-helix motif ambt_07465 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ambt_07465 PF03120 NAD-dependent DNA ligase OB-fold domain ambt_07465 PF01653 NAD-dependent DNA ligase adenylation domain ambt_07465 PF00533 BRCA1 C Terminus (BRCT) domain ambt_07480 PF00005 ABC transporter ambt_07480 PF00664 ABC transporter transmembrane region ambt_07490 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ambt_07495 PF03966 Trm112p-like protein ambt_07500 PF02348 Cytidylyltransferase ambt_07505 PF00106 short chain dehydrogenase ambt_07510 PF04055 Radical SAM superfamily ambt_07510 PF00919 Uncharacterized protein family UPF0004 ambt_07510 PF18693 TRAM domain ambt_07530 PF00899 ThiF family ambt_07535 PF13409 Glutathione S-transferase, N-terminal domain ambt_07540 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ambt_07540 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ambt_07540 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ambt_07540 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ambt_07550 PF00285 Citrate synthase, C-terminal domain ambt_07555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ambt_07560 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ambt_07565 PF02910 Fumarate reductase flavoprotein C-term ambt_07565 PF00890 FAD binding domain ambt_07570 PF13085 2Fe-2S iron-sulfur cluster binding domain ambt_07575 PF16078 2-oxoglutarate dehydrogenase N-terminus ambt_07575 PF02779 Transketolase, pyrimidine binding domain ambt_07575 PF16870 2-oxoglutarate dehydrogenase C-terminal ambt_07575 PF00676 Dehydrogenase E1 component ambt_07580 PF02817 e3 binding domain ambt_07580 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ambt_07580 PF00364 Biotin-requiring enzyme ambt_07585 PF00549 CoA-ligase ambt_07585 PF08442 ATP-grasp domain ambt_07590 PF02629 CoA binding domain ambt_07590 PF00549 CoA-ligase ambt_07605 PF01527 Transposase ambt_07610 PF00665 Integrase core domain ambt_07610 PF13276 HTH-like domain ambt_07610 PF13333 Integrase core domain ambt_07620 PF04820 Tryptophan halogenase ambt_07630 PF03714 Bacterial pullanase-associated domain ambt_07630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ambt_07630 PF18494 Pullulanase Ins domain ambt_07630 PF17967 Pullulanase N2 domain ambt_07630 PF11852 Domain of unknown function (DUF3372) ambt_07635 PF01734 Patatin-like phospholipase ambt_07650 PF16657 Maltogenic Amylase, C-terminal domain ambt_07650 PF02903 Alpha amylase, N-terminal ig-like domain ambt_07650 PF00128 Alpha amylase, catalytic domain ambt_07655 PF09087 Cyclomaltodextrinase, N-terminal ambt_07655 PF10438 Cyclo-malto-dextrinase C-terminal domain ambt_07655 PF00128 Alpha amylase, catalytic domain ambt_07665 PF00128 Alpha amylase, catalytic domain ambt_07665 PF03423 Carbohydrate binding domain (family 25) ambt_07665 PF01373 Glycosyl hydrolase family 14 ambt_07670 PF00356 Bacterial regulatory proteins, lacI family ambt_07675 PF00749 tRNA synthetases class I (E and Q), catalytic domain ambt_07675 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ambt_07680 PF00106 short chain dehydrogenase ambt_07685 PF12262 Bacterial virulence factor lipase N-terminal ambt_07690 PF01804 Penicillin amidase ambt_07695 PF08496 Peptidase family S49 N-terminal ambt_07695 PF01343 Peptidase family S49 ambt_07700 PF00440 Bacterial regulatory proteins, tetR family ambt_07715 PF00144 Beta-lactamase ambt_07720 PF01784 NIF3 (NGG1p interacting factor 3) ambt_07730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ambt_07730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ambt_07735 PF00255 Glutathione peroxidase ambt_07740 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ambt_07740 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ambt_07750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ambt_07750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ambt_07750 PF02770 Acyl-CoA dehydrogenase, middle domain ambt_07755 PF00378 Enoyl-CoA hydratase/isomerase ambt_07760 PF13847 Methyltransferase domain ambt_07765 PF08645 Polynucleotide kinase 3 phosphatase ambt_07770 PF00884 Sulfatase ambt_07770 PF11893 Domain of unknown function (DUF3413) ambt_07775 PF07208 Protein of unknown function (DUF1414) ambt_07780 PF04245 37-kD nucleoid-associated bacterial protein ambt_07790 PF01551 Peptidase family M23 ambt_07790 PF01476 LysM domain ambt_07815 PF07694 5TMR of 5TMR-LYT ambt_07815 PF06580 Histidine kinase ambt_07820 PF00072 Response regulator receiver domain ambt_07820 PF04397 LytTr DNA-binding domain ambt_07825 PF00365 Phosphofructokinase ambt_07835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_07835 PF00512 His Kinase A (phospho-acceptor) domain ambt_07835 PF00497 Bacterial extracellular solute-binding proteins, family 3 ambt_07835 PF00072 Response regulator receiver domain ambt_07835 PF00989 PAS fold ambt_07835 PF01627 Hpt domain ambt_07855 PF00849 RNA pseudouridylate synthase ambt_07855 PF01479 S4 domain ambt_07900 PF00270 DEAD/DEAH box helicase ambt_07900 PF00271 Helicase conserved C-terminal domain ambt_07905 PF01144 Coenzyme A transferase ambt_07910 PF01144 Coenzyme A transferase ambt_07915 PF03466 LysR substrate binding domain ambt_07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_07930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_07930 PF03466 LysR substrate binding domain ambt_07935 PF03315 Serine dehydratase beta chain ambt_07935 PF03313 Serine dehydratase alpha chain ambt_07940 PF00293 NUDIX domain ambt_07945 PF00425 chorismate binding enzyme ambt_07945 PF04715 Anthranilate synthase component I, N terminal region ambt_07955 PF02646 RmuC family ambt_07960 PF00082 Subtilase family ambt_07960 PF02225 PA domain ambt_07960 PF05922 Peptidase inhibitor I9 ambt_07960 PF13860 FlgD Ig-like domain ambt_07965 PF00676 Dehydrogenase E1 component ambt_07970 PF02780 Transketolase, C-terminal domain ambt_07970 PF02779 Transketolase, pyrimidine binding domain ambt_07975 PF00364 Biotin-requiring enzyme ambt_07975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ambt_07975 PF02817 e3 binding domain ambt_07980 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ambt_07985 PF00069 Protein kinase domain ambt_07995 PF00132 Bacterial transferase hexapeptide (six repeats) ambt_08000 PF00266 Aminotransferase class-V ambt_08010 PF13185 GAF domain ambt_08020 PF17516 ProQ C-terminal domain ambt_08020 PF04352 ProQ/FINO family ambt_08025 PF17804 Tail specific protease N-terminal domain ambt_08025 PF00595 PDZ domain ambt_08025 PF11818 C-terminal domain of tail specific protease (DUF3340) ambt_08025 PF03572 Peptidase family S41 ambt_08030 PF00209 Sodium:neurotransmitter symporter family ambt_08040 PF01433 Peptidase family M1 domain ambt_08040 PF11940 Domain of unknown function (DUF3458) Ig-like fold ambt_08040 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ambt_08055 PF07044 Protein of unknown function (DUF1329) ambt_08070 PF05088 Bacterial NAD-glutamate dehydrogenase ambt_08075 PF01180 Dihydroorotate dehydrogenase ambt_08080 PF10672 S-adenosylmethionine-dependent methyltransferase ambt_08080 PF01170 Putative RNA methylase family UPF0020 ambt_08080 PF02926 THUMP domain ambt_08100 PF04957 Ribosome modulation factor ambt_08105 PF07977 FabA-like domain ambt_08115 PF03441 FAD binding domain of DNA photolyase ambt_08115 PF00875 DNA photolyase ambt_08120 PF00875 DNA photolyase ambt_08120 PF03441 FAD binding domain of DNA photolyase ambt_08125 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ambt_08190 PF01219 Prokaryotic diacylglycerol kinase ambt_08195 PF00582 Universal stress protein family ambt_08205 PF01645 Conserved region in glutamate synthase ambt_08210 PF00999 Sodium/hydrogen exchanger family ambt_08215 PF00210 Ferritin-like domain ambt_08220 PF00210 Ferritin-like domain ambt_08230 PF00115 Cytochrome C and Quinol oxidase polypeptide I ambt_08245 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ambt_08245 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ambt_08255 PF00403 Heavy-metal-associated domain ambt_08270 PF13545 Crp-like helix-turn-helix domain ambt_08270 PF00027 Cyclic nucleotide-binding domain ambt_08275 PF00582 Universal stress protein family ambt_08280 PF01171 PP-loop family ambt_08285 PF01734 Patatin-like phospholipase ambt_08305 PF01810 LysE type translocator ambt_08310 PF02146 Sir2 family ambt_08315 PF00581 Rhodanese-like domain ambt_08320 PF08534 Redoxin ambt_08330 PF01066 CDP-alcohol phosphatidyltransferase ambt_08335 PF08459 UvrC Helix-hairpin-helix N-terminal ambt_08335 PF01541 GIY-YIG catalytic domain ambt_08335 PF02151 UvrB/uvrC motif ambt_08340 PF00072 Response regulator receiver domain ambt_08340 PF00196 Bacterial regulatory proteins, luxR family ambt_08345 PF02678 Pirin ambt_08345 PF17954 Quercetinase C-terminal cupin domain ambt_08385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_08385 PF00512 His Kinase A (phospho-acceptor) domain ambt_08385 PF00989 PAS fold ambt_08385 PF11808 Phosphate regulon sensor protein PhoR ambt_08390 PF00072 Response regulator receiver domain ambt_08390 PF00486 Transcriptional regulatory protein, C terminal ambt_08415 PF00144 Beta-lactamase ambt_08420 PF01027 Inhibitor of apoptosis-promoting Bax1 ambt_08425 PF02635 DsrE/DsrF-like family ambt_08430 PF02635 DsrE/DsrF-like family ambt_08440 PF04358 DsrC like protein ambt_08450 PF02403 Seryl-tRNA synthetase N-terminal domain ambt_08450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ambt_08455 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ambt_08460 PF16193 AAA C-terminal domain ambt_08460 PF12002 MgsA AAA+ ATPase C terminal ambt_08460 PF00004 ATPase family associated with various cellular activities (AAA) ambt_08465 PF03548 Outer membrane lipoprotein carrier protein LolA ambt_08470 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ambt_08470 PF17854 FtsK alpha domain ambt_08470 PF09397 Ftsk gamma domain ambt_08470 PF01580 FtsK/SpoIIIE family ambt_08475 PF01037 Lrp/AsnC ligand binding domain ambt_08480 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ambt_08480 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ambt_08485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ambt_08490 PF18073 Rubredoxin metal binding domain ambt_08495 PF06305 Lipopolysaccharide assembly protein A domain ambt_08505 PF00216 Bacterial DNA-binding protein ambt_08510 PF00575 S1 RNA binding domain ambt_08515 PF02224 Cytidylate kinase ambt_08520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ambt_08525 PF00266 Aminotransferase class-V ambt_08530 PF03989 DNA gyrase C-terminal domain, beta-propeller ambt_08530 PF00521 DNA gyrase/topoisomerase IV, subunit A ambt_08540 PF02867 Ribonucleotide reductase, barrel domain ambt_08540 PF03477 ATP cone domain ambt_08540 PF00317 Ribonucleotide reductase, all-alpha domain ambt_08545 PF00268 Ribonucleotide reductase, small chain ambt_08550 PF00111 2Fe-2S iron-sulfur cluster binding domain ambt_08555 PF00672 HAMP domain ambt_08555 PF00989 PAS fold ambt_08555 PF00512 His Kinase A (phospho-acceptor) domain ambt_08555 PF18698 Histidine kinase sensor domain ambt_08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_08560 PF00486 Transcriptional regulatory protein, C terminal ambt_08560 PF00072 Response regulator receiver domain ambt_08620 PF11954 Domain of unknown function (DUF3471) ambt_08620 PF00144 Beta-lactamase ambt_08630 PF01548 Transposase ambt_08630 PF02371 Transposase IS116/IS110/IS902 family ambt_08695 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ambt_08730 PF00665 Integrase core domain ambt_08805 PF00005 ABC transporter ambt_08820 PF07715 TonB-dependent Receptor Plug Domain ambt_08820 PF00593 TonB dependent receptor ambt_08830 PF00892 EamA-like transporter family ambt_08835 PF01259 SAICAR synthetase ambt_08840 PF06804 NlpB/DapX lipoprotein ambt_08845 PF00701 Dihydrodipicolinate synthetase family ambt_08855 PF00578 AhpC/TSA family ambt_08860 PF01594 AI-2E family transporter ambt_08865 PF01435 Peptidase family M48 ambt_08880 PF03960 ArsC family ambt_08885 PF03358 NADPH-dependent FMN reductase ambt_08900 PF00308 Bacterial dnaA protein ambt_08910 PF02769 AIR synthase related protein, C-terminal domain ambt_08910 PF00586 AIR synthase related protein, N-terminal domain ambt_08915 PF00551 Formyl transferase ambt_08925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ambt_08925 PF02770 Acyl-CoA dehydrogenase, middle domain ambt_08925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ambt_08925 PF09317 Domain of unknown function (DUF1974) ambt_08935 PF00196 Bacterial regulatory proteins, luxR family ambt_08935 PF00072 Response regulator receiver domain ambt_08940 PF13649 Methyltransferase domain ambt_08945 PF08003 Protein of unknown function (DUF1698) ambt_08950 PF00485 Phosphoribulokinase / Uridine kinase family ambt_08965 PF00128 Alpha amylase, catalytic domain ambt_08970 PF00994 Probable molybdopterin binding domain ambt_08970 PF03454 MoeA C-terminal region (domain IV) ambt_08970 PF03453 MoeA N-terminal region (domain I and II) ambt_08975 PF01554 MatE ambt_08995 PF00291 Pyridoxal-phosphate dependent enzyme ambt_09020 PF13340 Putative transposase of IS4/5 family (DUF4096) ambt_09040 PF00378 Enoyl-CoA hydratase/isomerase ambt_09055 PF02525 Flavodoxin-like fold ambt_09060 PF01053 Cys/Met metabolism PLP-dependent enzyme ambt_09075 PF00155 Aminotransferase class I and II ambt_09080 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ambt_09095 PF12806 Acetyl-CoA dehydrogenase C-terminal like ambt_09095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ambt_09095 PF02770 Acyl-CoA dehydrogenase, middle domain ambt_09095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ambt_09100 PF12833 Helix-turn-helix domain ambt_09100 PF02311 AraC-like ligand binding domain ambt_09105 PF00593 TonB dependent receptor ambt_09105 PF07715 TonB-dependent Receptor Plug Domain ambt_09115 PF00873 AcrB/AcrD/AcrF family ambt_09120 PF00529 HlyD membrane-fusion protein of T1SS ambt_09120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_09130 PF01012 Electron transfer flavoprotein domain ambt_09130 PF00766 Electron transfer flavoprotein FAD-binding domain ambt_09135 PF01012 Electron transfer flavoprotein domain ambt_09145 PF00816 H-NS histone family ambt_09150 PF12697 Alpha/beta hydrolase family ambt_09160 PF00258 Flavodoxin ambt_09165 PF00672 HAMP domain ambt_09165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_09170 PF01475 Ferric uptake regulator family ambt_09180 PF01204 Trehalase ambt_09185 PF02447 GntP family permease ambt_09190 PF01202 Shikimate kinase ambt_09195 PF00356 Bacterial regulatory proteins, lacI family ambt_09200 PF01063 Amino-transferase class IV ambt_09205 PF02626 Carboxyltransferase domain, subdomain A and B ambt_09215 PF03746 LamB/YcsF family ambt_09220 PF17783 CvfB-like winged helix domain ambt_09220 PF13509 S1 domain ambt_09225 PF02566 OsmC-like protein ambt_09230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_09235 PF00873 AcrB/AcrD/AcrF family ambt_09240 PF00873 AcrB/AcrD/AcrF family ambt_09255 PF00155 Aminotransferase class I and II ambt_09275 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ambt_09275 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ambt_09310 PF13286 Phosphohydrolase-associated domain ambt_09310 PF01966 HD domain ambt_09320 PF00174 Oxidoreductase molybdopterin binding domain ambt_09325 PF01794 Ferric reductase like transmembrane component ambt_09330 PF09335 SNARE associated Golgi protein ambt_09340 PF02810 SEC-C motif ambt_09350 PF01717 Cobalamin-independent synthase, Catalytic domain ambt_09350 PF08267 Cobalamin-independent synthase, N-terminal domain ambt_09375 PF09905 DNA-binding protein VF530 ambt_09385 PF00583 Acetyltransferase (GNAT) family ambt_09390 PF00005 ABC transporter ambt_09400 PF01138 3' exoribonuclease family, domain 1 ambt_09400 PF00013 KH domain ambt_09400 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ambt_09400 PF00575 S1 RNA binding domain ambt_09400 PF03725 3' exoribonuclease family, domain 2 ambt_09410 PF05552 Conserved TM helix ambt_09410 PF00924 Mechanosensitive ion channel ambt_09415 PF13340 Putative transposase of IS4/5 family (DUF4096) ambt_09430 PF00474 Sodium:solute symporter family ambt_09450 PF00781 Diacylglycerol kinase catalytic domain ambt_09460 PF01679 Proteolipid membrane potential modulator ambt_09465 PF13188 PAS domain ambt_09465 PF03707 Bacterial signalling protein N terminal repeat ambt_09465 PF00990 Diguanylate cyclase, GGDEF domain ambt_09465 PF00563 EAL domain ambt_09470 PF03840 Preprotein translocase SecG subunit ambt_09475 PF00121 Triosephosphate isomerase ambt_09480 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ambt_09480 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ambt_09480 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ambt_09480 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ambt_09485 PF00809 Pterin binding enzyme ambt_09490 PF00004 ATPase family associated with various cellular activities (AAA) ambt_09490 PF01434 Peptidase family M41 ambt_09490 PF17862 AAA+ lid domain ambt_09490 PF06480 FtsH Extracellular ambt_09495 PF01728 FtsJ-like methyltransferase ambt_09500 PF01985 CRS1 / YhbY (CRM) domain ambt_09505 PF00106 short chain dehydrogenase ambt_09510 PF13654 AAA domain ambt_09510 PF05362 Lon protease (S16) C-terminal proteolytic domain ambt_09515 PF13603 Leucyl-tRNA synthetase, Domain 2 ambt_09515 PF08264 Anticodon-binding domain of tRNA ambt_09515 PF00133 tRNA synthetases class I (I, L, M and V) ambt_09525 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ambt_09525 PF06144 DNA polymerase III, delta subunit ambt_09530 PF01467 Cytidylyltransferase-like ambt_09540 PF02590 Predicted SPOUT methyltransferase ambt_09545 PF03717 Penicillin-binding Protein dimerisation domain ambt_09545 PF00905 Penicillin binding protein transpeptidase domain ambt_09550 PF01098 Cell cycle protein ambt_09555 PF03330 Lytic transglycolase ambt_09555 PF05036 Sporulation related domain ambt_09560 PF00768 D-alanyl-D-alanine carboxypeptidase ambt_09560 PF07943 Penicillin-binding protein 5, C-terminal domain ambt_09565 PF04359 Protein of unknown function (DUF493) ambt_09570 PF03099 Biotin/lipoate A/B protein ligase family ambt_09575 PF04055 Radical SAM superfamily ambt_09575 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ambt_09585 PF00710 Asparaginase, N-terminal ambt_09585 PF17763 Glutaminase/Asparaginase C-terminal domain ambt_09595 PF00881 Nitroreductase family ambt_09610 PF01343 Peptidase family S49 ambt_09615 PF10263 SprT-like family ambt_09615 PF17283 SprT-like zinc ribbon domain ambt_09620 PF04217 Protein of unknown function, DUF412 ambt_09630 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_09635 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ambt_09640 PF04377 Arginine-tRNA-protein transferase, C terminus ambt_09640 PF04376 Arginine-tRNA-protein transferase, N terminus ambt_09645 PF01176 Translation initiation factor 1A / IF-1 ambt_09655 PF02861 Clp amino terminal domain, pathogenicity island component ambt_09655 PF17871 AAA lid domain ambt_09655 PF07724 AAA domain (Cdc48 subfamily) ambt_09655 PF00004 ATPase family associated with various cellular activities (AAA) ambt_09655 PF10431 C-terminal, D2-small domain, of ClpB protein ambt_09660 PF02617 ATP-dependent Clp protease adaptor protein ClpS ambt_09665 PF00313 'Cold-shock' DNA-binding domain ambt_09670 PF03971 Monomeric isocitrate dehydrogenase ambt_09675 PF00849 RNA pseudouridylate synthase ambt_09685 PF04356 Protein of unknown function (DUF489) ambt_09690 PF00206 Lyase ambt_09690 PF08328 Adenylosuccinate lyase C-terminal ambt_09695 PF00211 Adenylate and Guanylate cyclase catalytic domain ambt_09700 PF08007 Cupin superfamily protein ambt_09720 PF02913 FAD linked oxidases, C-terminal domain ambt_09720 PF01565 FAD binding domain ambt_09720 PF13183 4Fe-4S dicluster domain ambt_09725 PF06865 Pyrimidine/purine nucleoside phosphorylase ambt_09765 PF03551 Transcriptional regulator PadR-like family ambt_09785 PF00043 Glutathione S-transferase, C-terminal domain ambt_09785 PF02798 Glutathione S-transferase, N-terminal domain ambt_09810 PF14592 Chondroitinase B ambt_09840 PF00356 Bacterial regulatory proteins, lacI family ambt_09845 PF03547 Membrane transport protein ambt_09855 PF01799 [2Fe-2S] binding domain ambt_09855 PF00111 2Fe-2S iron-sulfur cluster binding domain ambt_09860 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ambt_09865 PF00391 PEP-utilising enzyme, mobile domain ambt_09865 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ambt_09865 PF02896 PEP-utilising enzyme, TIM barrel domain ambt_09870 PF03618 Kinase/pyrophosphorylase ambt_09890 PF14552 Tautomerase enzyme ambt_09905 PF04191 Phospholipid methyltransferase ambt_09910 PF06271 RDD family ambt_09935 PF00990 Diguanylate cyclase, GGDEF domain ambt_09935 PF00072 Response regulator receiver domain ambt_09940 PF13460 NAD(P)H-binding ambt_09950 PF01026 TatD related DNase ambt_09955 PF09115 DNA polymerase III, delta subunit, C terminal ambt_09960 PF02223 Thymidylate kinase ambt_09965 PF02618 YceG-like family ambt_09970 PF01063 Amino-transferase class IV ambt_09975 PF02801 Beta-ketoacyl synthase, C-terminal domain ambt_09975 PF00109 Beta-ketoacyl synthase, N-terminal domain ambt_09980 PF00550 Phosphopantetheine attachment site ambt_09990 PF00698 Acyl transferase domain ambt_09995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ambt_09995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ambt_10000 PF02504 Fatty acid synthesis protein ambt_10005 PF01783 Ribosomal L32p protein family ambt_10010 PF02620 Large ribosomal RNA subunit accumulation protein YceD ambt_10015 PF02545 Maf-like protein ambt_10020 PF13419 Haloacid dehalogenase-like hydrolase ambt_10025 PF01479 S4 domain ambt_10025 PF00849 RNA pseudouridylate synthase ambt_10030 PF10150 Ribonuclease E/G family ambt_10030 PF00575 S1 RNA binding domain ambt_10030 PF12111 Polyribonucleotide phosphorylase C terminal ambt_10045 PF13419 Haloacid dehalogenase-like hydrolase ambt_10050 PF13673 Acetyltransferase (GNAT) domain ambt_10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_10060 PF03466 LysR substrate binding domain ambt_10070 PF02798 Glutathione S-transferase, N-terminal domain ambt_10110 PF00962 Adenosine/AMP deaminase ambt_10120 PF01131 DNA topoisomerase ambt_10120 PF08272 Topoisomerase I zinc-ribbon-like ambt_10120 PF01751 Toprim domain ambt_10120 PF01396 Topoisomerase DNA binding C4 zinc finger ambt_10125 PF04996 Succinylarginine dihydrolase ambt_10130 PF02369 Bacterial Ig-like domain (group 1) ambt_10130 PF11924 Inverse autotransporter, beta-domain ambt_10130 PF09134 Invasin, domain 3 ambt_10135 PF00375 Sodium:dicarboxylate symporter family ambt_10140 PF12704 MacB-like periplasmic core domain ambt_10140 PF02687 FtsX-like permease family ambt_10145 PF00005 ABC transporter ambt_10150 PF12792 CSS motif domain associated with EAL ambt_10150 PF00563 EAL domain ambt_10160 PF00929 Exonuclease ambt_10165 PF00075 RNase H ambt_10170 PF00107 Zinc-binding dehydrogenase ambt_10170 PF08240 Alcohol dehydrogenase GroES-like domain ambt_10180 PF17785 PUA-like domain ambt_10180 PF10672 S-adenosylmethionine-dependent methyltransferase ambt_10195 PF00270 DEAD/DEAH box helicase ambt_10195 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ambt_10195 PF00271 Helicase conserved C-terminal domain ambt_10195 PF11898 Domain of unknown function (DUF3418) ambt_10195 PF04408 Helicase associated domain (HA2) ambt_10225 PF02333 Phytase ambt_10235 PF01627 Hpt domain ambt_10235 PF00512 His Kinase A (phospho-acceptor) domain ambt_10235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_10235 PF00672 HAMP domain ambt_10235 PF00072 Response regulator receiver domain ambt_10235 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ambt_10255 PF08411 Exonuclease C-terminal ambt_10255 PF00929 Exonuclease ambt_10265 PF17151 Periplasmic sensor domain ambt_10265 PF00990 Diguanylate cyclase, GGDEF domain ambt_10270 PF00108 Thiolase, N-terminal domain ambt_10270 PF02803 Thiolase, C-terminal domain ambt_10275 PF13411 MerR HTH family regulatory protein ambt_10280 PF02770 Acyl-CoA dehydrogenase, middle domain ambt_10280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ambt_10280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ambt_10285 PF01039 Carboxyl transferase domain ambt_10290 PF00378 Enoyl-CoA hydratase/isomerase ambt_10295 PF00289 Biotin carboxylase, N-terminal domain ambt_10295 PF02785 Biotin carboxylase C-terminal domain ambt_10295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ambt_10295 PF00364 Biotin-requiring enzyme ambt_10300 PF00682 HMGL-like ambt_10315 PF00563 EAL domain ambt_10315 PF00990 Diguanylate cyclase, GGDEF domain ambt_10315 PF03707 Bacterial signalling protein N terminal repeat ambt_10330 PF01156 Inosine-uridine preferring nucleoside hydrolase ambt_10335 PF00483 Nucleotidyl transferase ambt_10345 PF07690 Major Facilitator Superfamily ambt_10380 PF03372 Endonuclease/Exonuclease/phosphatase family ambt_10395 PF02687 FtsX-like permease family ambt_10395 PF12704 MacB-like periplasmic core domain ambt_10405 PF02559 CarD-like/TRCF domain ambt_10405 PF00270 DEAD/DEAH box helicase ambt_10405 PF00271 Helicase conserved C-terminal domain ambt_10405 PF03461 TRCF domain ambt_10405 PF17757 UvrB interaction domain ambt_10415 PF01923 Cobalamin adenosyltransferase ambt_10420 PF00939 Sodium:sulfate symporter transmembrane region ambt_10425 PF00933 Glycosyl hydrolase family 3 N terminal domain ambt_10435 PF04073 Aminoacyl-tRNA editing domain ambt_10455 PF00216 Bacterial DNA-binding protein ambt_10460 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ambt_10460 PF03484 tRNA synthetase B5 domain ambt_10460 PF03147 Ferredoxin-fold anticodon binding domain ambt_10460 PF03483 B3/4 domain ambt_10460 PF01588 Putative tRNA binding domain ambt_10465 PF01409 tRNA synthetases class II core domain (F) ambt_10465 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ambt_10495 PF00535 Glycosyl transferase family 2 ambt_10500 PF04138 GtrA-like protein ambt_10505 PF01757 Acyltransferase family ambt_10510 PF13439 Glycosyltransferase Family 4 ambt_10510 PF00534 Glycosyl transferases group 1 ambt_10530 PF01050 Mannose-6-phosphate isomerase ambt_10530 PF00483 Nucleotidyl transferase ambt_10540 PF00535 Glycosyl transferase family 2 ambt_10590 PF00535 Glycosyl transferase family 2 ambt_10595 PF00535 Glycosyl transferase family 2 ambt_10605 PF00534 Glycosyl transferases group 1 ambt_10605 PF13477 Glycosyl transferase 4-like ambt_10610 PF00132 Bacterial transferase hexapeptide (six repeats) ambt_10610 PF06426 Serine acetyltransferase, N-terminal ambt_10620 PF13439 Glycosyltransferase Family 4 ambt_10620 PF00534 Glycosyl transferases group 1 ambt_10630 PF00563 EAL domain ambt_10630 PF03707 Bacterial signalling protein N terminal repeat ambt_10630 PF00990 Diguanylate cyclase, GGDEF domain ambt_10660 PF13614 AAA domain ambt_10665 PF02563 Polysaccharide biosynthesis/export protein ambt_10665 PF10531 SLBB domain ambt_10665 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ambt_10675 PF02397 Bacterial sugar transferase ambt_10685 PF00453 Ribosomal protein L20 ambt_10690 PF01632 Ribosomal protein L35 ambt_10695 PF00707 Translation initiation factor IF-3, C-terminal domain ambt_10695 PF05198 Translation initiation factor IF-3, N-terminal domain ambt_10700 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ambt_10700 PF02824 TGS domain ambt_10700 PF03129 Anticodon binding domain ambt_10700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ambt_10735 PF01425 Amidase ambt_10745 PF01925 Sulfite exporter TauE/SafE ambt_10750 PF00266 Aminotransferase class-V ambt_10755 PF07687 Peptidase dimerisation domain ambt_10755 PF01546 Peptidase family M20/M25/M40 ambt_10775 PF00860 Permease family ambt_10780 PF07715 TonB-dependent Receptor Plug Domain ambt_10780 PF00593 TonB dependent receptor ambt_10790 PF00512 His Kinase A (phospho-acceptor) domain ambt_10790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_10790 PF00072 Response regulator receiver domain ambt_10790 PF09308 LuxQ, periplasmic ambt_10795 PF00990 Diguanylate cyclase, GGDEF domain ambt_10795 PF00072 Response regulator receiver domain ambt_10800 PF00563 EAL domain ambt_10800 PF00990 Diguanylate cyclase, GGDEF domain ambt_10800 PF03707 Bacterial signalling protein N terminal repeat ambt_10810 PF00962 Adenosine/AMP deaminase ambt_10815 PF00860 Permease family ambt_10830 PF00440 Bacterial regulatory proteins, tetR family ambt_10830 PF08362 YcdC-like protein, C-terminal region ambt_10835 PF01799 [2Fe-2S] binding domain ambt_10835 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ambt_10835 PF00111 2Fe-2S iron-sulfur cluster binding domain ambt_10835 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ambt_10840 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ambt_10840 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ambt_10855 PF00576 HIUase/Transthyretin family ambt_10860 PF01979 Amidohydrolase family ambt_10870 PF13426 PAS domain ambt_10870 PF08448 PAS fold ambt_10870 PF05231 MASE1 ambt_10870 PF08447 PAS fold ambt_10870 PF00990 Diguanylate cyclase, GGDEF domain ambt_10870 PF00563 EAL domain ambt_10875 PF00990 Diguanylate cyclase, GGDEF domain ambt_10875 PF00072 Response regulator receiver domain ambt_10975 PF00574 Clp protease ambt_11000 PF04209 homogentisate 1,2-dioxygenase ambt_11005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ambt_11020 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ambt_11025 PF03960 ArsC family ambt_11030 PF07687 Peptidase dimerisation domain ambt_11030 PF01546 Peptidase family M20/M25/M40 ambt_11045 PF01906 Putative heavy-metal-binding ambt_11055 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ambt_11060 PF00563 EAL domain ambt_11060 PF00990 Diguanylate cyclase, GGDEF domain ambt_11060 PF03707 Bacterial signalling protein N terminal repeat ambt_11065 PF00343 Carbohydrate phosphorylase ambt_11070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ambt_11070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ambt_11070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ambt_11070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ambt_11075 PF03925 SeqA protein C-terminal domain ambt_11075 PF17206 SeqA protein N-terminal domain ambt_11080 PF17863 AAA lid domain ambt_11080 PF07726 ATPase family associated with various cellular activities (AAA) ambt_11090 PF01841 Transglutaminase-like superfamily ambt_11090 PF13559 Domain of unknown function (DUF4129) ambt_11090 PF11992 Domain of unknown function (DUF3488) ambt_11095 PF01226 Formate/nitrite transporter ambt_11100 PF00069 Protein kinase domain ambt_11100 PF03793 PASTA domain ambt_11105 PF02560 Cyanate lyase C-terminal domain ambt_11115 PF18125 RlmM ferredoxin-like domain ambt_11115 PF01728 FtsJ-like methyltransferase ambt_11130 PF03466 LysR substrate binding domain ambt_11130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_11145 PF04247 Invasion gene expression up-regulator, SirB ambt_11150 PF11849 Domain of unknown function (DUF3369) ambt_11155 PF17827 PrmC N-terminal domain ambt_11155 PF13847 Methyltransferase domain ambt_11160 PF00472 RF-1 domain ambt_11160 PF03462 PCRF domain ambt_11165 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ambt_11165 PF01488 Shikimate / quinate 5-dehydrogenase ambt_11165 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ambt_11170 PF03550 Outer membrane lipoprotein LolB ambt_11175 PF08544 GHMP kinases C terminal ambt_11175 PF00288 GHMP kinases N terminal domain ambt_11180 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ambt_11180 PF14572 Phosphoribosyl synthetase-associated domain ambt_11185 PF08448 PAS fold ambt_11185 PF08447 PAS fold ambt_11185 PF00563 EAL domain ambt_11185 PF00990 Diguanylate cyclase, GGDEF domain ambt_11195 PF08240 Alcohol dehydrogenase GroES-like domain ambt_11195 PF00107 Zinc-binding dehydrogenase ambt_11200 PF01386 Ribosomal L25p family ambt_11200 PF14693 Ribosomal protein TL5, C-terminal domain ambt_11205 PF01195 Peptidyl-tRNA hydrolase ambt_11210 PF06071 Protein of unknown function (DUF933) ambt_11210 PF01926 50S ribosome-binding GTPase ambt_11215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ambt_11225 PF01235 Sodium:alanine symporter family ambt_11230 PF01613 Flavin reductase like domain ambt_11245 PF01757 Acyltransferase family ambt_11265 PF13808 DDE_Tnp_1-associated ambt_11265 PF01609 Transposase DDE domain ambt_11280 PF00668 Condensation domain ambt_11280 PF00550 Phosphopantetheine attachment site ambt_11280 PF00501 AMP-binding enzyme ambt_11280 PF13193 AMP-binding enzyme C-terminal domain ambt_11290 PF01757 Acyltransferase family ambt_11295 PF03808 Glycosyl transferase WecB/TagA/CpsF family ambt_11305 PF13439 Glycosyltransferase Family 4 ambt_11305 PF00534 Glycosyl transferases group 1 ambt_11330 PF13614 AAA domain ambt_11370 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal ambt_11370 PF14602 Hexapeptide repeat of succinyl-transferase ambt_11370 PF00132 Bacterial transferase hexapeptide (six repeats) ambt_11395 PF01494 FAD binding domain ambt_11400 PF04055 Radical SAM superfamily ambt_11400 PF01938 TRAM domain ambt_11400 PF00919 Uncharacterized protein family UPF0004 ambt_11405 PF02562 PhoH-like protein ambt_11410 PF02130 Uncharacterized protein family UPF0054 ambt_11415 PF00571 CBS domain ambt_11415 PF03471 Transporter associated domain ambt_11420 PF00795 Carbon-nitrogen hydrolase ambt_11425 PF07085 DRTGG domain ambt_11425 PF01515 Phosphate acetyl/butaryl transferase ambt_11430 PF00871 Acetokinase family ambt_11435 PF00011 Hsp20/alpha crystallin family ambt_11460 PF12729 Four helix bundle sensory module for signal transduction ambt_11460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_11460 PF00672 HAMP domain ambt_11465 PF03449 Transcription elongation factor, N-terminal ambt_11465 PF01272 Transcription elongation factor, GreA/GreB, C-term ambt_11470 PF02142 MGS-like domain ambt_11470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ambt_11470 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ambt_11475 PF00117 Glutamine amidotransferase class-I ambt_11475 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ambt_11480 PF01113 Dihydrodipicolinate reductase, N-terminus ambt_11480 PF05173 Dihydrodipicolinate reductase, C-terminus ambt_11490 PF00501 AMP-binding enzyme ambt_11490 PF13193 AMP-binding enzyme C-terminal domain ambt_11490 PF16177 Acetyl-coenzyme A synthetase N-terminus ambt_11500 PF00990 Diguanylate cyclase, GGDEF domain ambt_11500 PF03707 Bacterial signalling protein N terminal repeat ambt_11500 PF00563 EAL domain ambt_11505 PF01322 Cytochrome C' ambt_11510 PF00226 DnaJ domain ambt_11510 PF00684 DnaJ central domain ambt_11510 PF01556 DnaJ C terminal domain ambt_11515 PF00012 Hsp70 protein ambt_11520 PF01025 GrpE ambt_11525 PF01627 Hpt domain ambt_11525 PF00512 His Kinase A (phospho-acceptor) domain ambt_11525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ambt_11525 PF00072 Response regulator receiver domain ambt_11525 PF00672 HAMP domain ambt_11525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_11530 PF00196 Bacterial regulatory proteins, luxR family ambt_11530 PF00072 Response regulator receiver domain ambt_11535 PF00593 TonB dependent receptor ambt_11535 PF07715 TonB-dependent Receptor Plug Domain ambt_11545 PF00561 alpha/beta hydrolase fold ambt_11570 PF02463 RecF/RecN/SMC N terminal domain ambt_11575 PF04355 SmpA / OmlA family ambt_11580 PF05724 Thiopurine S-methyltransferase (TPMT) ambt_11585 PF04286 Protein of unknown function (DUF445) ambt_11590 PF03960 ArsC family ambt_11600 PF14602 Hexapeptide repeat of succinyl-transferase ambt_11600 PF12464 Maltose acetyltransferase ambt_11610 PF00248 Aldo/keto reductase family ambt_11620 PF00849 RNA pseudouridylate synthase ambt_11620 PF01479 S4 domain ambt_11625 PF04079 Segregation and condensation complex subunit ScpB ambt_11630 PF02616 Segregation and condensation protein ScpA ambt_11635 PF01300 Telomere recombination ambt_11640 PF02811 PHP domain ambt_11645 PF00425 chorismate binding enzyme ambt_11645 PF04715 Anthranilate synthase component I, N terminal region ambt_11650 PF00117 Glutamine amidotransferase class-I ambt_11655 PF02885 Glycosyl transferase family, helical bundle domain ambt_11655 PF00591 Glycosyl transferase family, a/b domain ambt_11660 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ambt_11660 PF00218 Indole-3-glycerol phosphate synthase ambt_11665 PF00291 Pyridoxal-phosphate dependent enzyme ambt_11670 PF00290 Tryptophan synthase alpha chain ambt_11675 PF03795 YCII-related domain ambt_11690 PF00072 Response regulator receiver domain ambt_11690 PF00486 Transcriptional regulatory protein, C terminal ambt_11695 PF08918 PhoQ Sensor ambt_11695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_11700 PF01594 AI-2E family transporter ambt_11705 PF02152 Dihydroneopterin aldolase ambt_11710 PF01370 NAD dependent epimerase/dehydratase family ambt_11710 PF08338 Domain of unknown function (DUF1731) ambt_11720 PF00005 ABC transporter ambt_11725 PF13472 GDSL-like Lipase/Acylhydrolase family ambt_11740 PF01207 Dihydrouridine synthase (Dus) ambt_11755 PF00749 tRNA synthetases class I (E and Q), catalytic domain ambt_11765 PF00486 Transcriptional regulatory protein, C terminal ambt_11765 PF00072 Response regulator receiver domain ambt_11775 PF04055 Radical SAM superfamily ambt_11775 PF06463 Molybdenum Cofactor Synthesis C ambt_11780 PF00005 ABC transporter ambt_11780 PF00664 ABC transporter transmembrane region ambt_11790 PF07690 Major Facilitator Superfamily ambt_11795 PF01474 Class-II DAHP synthetase family ambt_11800 PF00005 ABC transporter ambt_11805 PF01032 FecCD transport family ambt_11810 PF01451 Low molecular weight phosphotyrosine protein phosphatase ambt_11815 PF03575 Peptidase family S51 ambt_11825 PF08241 Methyltransferase domain ambt_11830 PF00155 Aminotransferase class I and II ambt_11835 PF06968 Biotin and Thiamin Synthesis associated domain ambt_11835 PF04055 Radical SAM superfamily ambt_11840 PF00202 Aminotransferase class-III ambt_11855 PF00583 Acetyltransferase (GNAT) family ambt_11860 PF08443 RimK-like ATP-grasp domain ambt_11860 PF18030 RimK PreATP-grasp domain ambt_11865 PF01699 Sodium/calcium exchanger protein ambt_11875 PF01336 OB-fold nucleic acid binding domain ambt_11875 PF00152 tRNA synthetases class II (D, K and N) ambt_11885 PF04403 Paraquat-inducible protein A ambt_11890 PF02470 MlaD protein ambt_11900 PF17151 Periplasmic sensor domain ambt_11900 PF00990 Diguanylate cyclase, GGDEF domain ambt_11905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_11910 PF00873 AcrB/AcrD/AcrF family ambt_11915 PF08361 MAATS-type transcriptional repressor, C-terminal region ambt_11915 PF00440 Bacterial regulatory proteins, tetR family ambt_11925 PF00873 AcrB/AcrD/AcrF family ambt_11930 PF00571 CBS domain ambt_11935 PF00107 Zinc-binding dehydrogenase ambt_11935 PF08240 Alcohol dehydrogenase GroES-like domain ambt_11940 PF00107 Zinc-binding dehydrogenase ambt_11940 PF08240 Alcohol dehydrogenase GroES-like domain ambt_11945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_11945 PF03466 LysR substrate binding domain ambt_11950 PF01292 Prokaryotic cytochrome b561 ambt_11955 PF18011 C-terminal domain found in long catalases ambt_11955 PF06628 Catalase-related immune-responsive ambt_11955 PF00199 Catalase ambt_11960 PF00106 short chain dehydrogenase ambt_11965 PF02774 Semialdehyde dehydrogenase, dimerisation domain ambt_11965 PF01118 Semialdehyde dehydrogenase, NAD binding domain ambt_11995 PF07690 Major Facilitator Superfamily ambt_12000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_12000 PF00512 His Kinase A (phospho-acceptor) domain ambt_12000 PF09308 LuxQ, periplasmic ambt_12000 PF00072 Response regulator receiver domain ambt_12030 PF00091 Tubulin/FtsZ family, GTPase domain ambt_12030 PF12327 FtsZ family, C-terminal domain ambt_12045 PF00557 Metallopeptidase family M24 ambt_12055 PF00990 Diguanylate cyclase, GGDEF domain ambt_12055 PF00072 Response regulator receiver domain ambt_12060 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ambt_12070 PF02445 Quinolinate synthetase A protein ambt_12075 PF16331 TolA binding protein trimerisation ambt_12075 PF13174 Tetratricopeptide repeat ambt_12085 PF00691 OmpA family ambt_12090 PF07676 WD40-like Beta Propeller Repeat ambt_12090 PF04052 TolB amino-terminal domain ambt_12100 PF02472 Biopolymer transport protein ExbD/TolR ambt_12105 PF01618 MotA/TolQ/ExbB proton channel family ambt_12110 PF03061 Thioesterase superfamily ambt_12115 PF05496 Holliday junction DNA helicase RuvB P-loop domain ambt_12115 PF05491 RuvB C-terminal winged helix domain ambt_12115 PF17864 RuvB AAA lid domain ambt_12130 PF00293 NUDIX domain ambt_12135 PF01336 OB-fold nucleic acid binding domain ambt_12135 PF00152 tRNA synthetases class II (D, K and N) ambt_12135 PF02938 GAD domain ambt_12150 PF00158 Sigma-54 interaction domain ambt_12150 PF00072 Response regulator receiver domain ambt_12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_12160 PF00512 His Kinase A (phospho-acceptor) domain ambt_12170 PF03707 Bacterial signalling protein N terminal repeat ambt_12170 PF00563 EAL domain ambt_12170 PF00990 Diguanylate cyclase, GGDEF domain ambt_12180 PF00072 Response regulator receiver domain ambt_12180 PF00990 Diguanylate cyclase, GGDEF domain ambt_12190 PF01253 Translation initiation factor SUI1 ambt_12195 PF00072 Response regulator receiver domain ambt_12200 PF01817 Chorismate mutase type II ambt_12200 PF00800 Prephenate dehydratase ambt_12205 PF02153 Prephenate dehydrogenase ambt_12205 PF01817 Chorismate mutase type II ambt_12210 PF00793 DAHP synthetase I family ambt_12215 PF03458 UPF0126 domain ambt_12230 PF01245 Ribosomal protein L19 ambt_12235 PF01746 tRNA (Guanine-1)-methyltransferase ambt_12240 PF05239 PRC-barrel domain ambt_12240 PF01782 RimM N-terminal domain ambt_12245 PF00886 Ribosomal protein S16 ambt_12260 PF01053 Cys/Met metabolism PLP-dependent enzyme ambt_12265 PF00005 ABC transporter ambt_12265 PF00664 ABC transporter transmembrane region ambt_12270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_12275 PF00873 AcrB/AcrD/AcrF family ambt_12280 PF03600 Citrate transporter ambt_12310 PF00448 SRP54-type protein, GTPase domain ambt_12310 PF02978 Signal peptide binding domain ambt_12310 PF02881 SRP54-type protein, helical bundle domain ambt_12315 PF01578 Cytochrome C assembly protein ambt_12320 PF03471 Transporter associated domain ambt_12320 PF00571 CBS domain ambt_12320 PF01595 Cyclin M transmembrane N-terminal domain ambt_12330 PF00300 Histidine phosphatase superfamily (branch 1) ambt_12335 PF16187 Middle or third domain of peptidase_M16 ambt_12335 PF05193 Peptidase M16 inactive domain ambt_12335 PF00675 Insulinase (Peptidase family M16) ambt_12340 PF00563 EAL domain ambt_12340 PF00990 Diguanylate cyclase, GGDEF domain ambt_12340 PF03707 Bacterial signalling protein N terminal repeat ambt_12355 PF00378 Enoyl-CoA hydratase/isomerase ambt_12355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ambt_12355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ambt_12360 PF00108 Thiolase, N-terminal domain ambt_12360 PF02803 Thiolase, C-terminal domain ambt_12365 PF17863 AAA lid domain ambt_12365 PF07726 ATPase family associated with various cellular activities (AAA) ambt_12370 PF01882 Protein of unknown function DUF58 ambt_12380 PF00092 von Willebrand factor type A domain ambt_12385 PF07584 Aerotolerance regulator N-terminal ambt_12385 PF00092 von Willebrand factor type A domain ambt_12400 PF04542 Sigma-70 region 2 ambt_12400 PF08281 Sigma-70, region 4 ambt_12410 PF17158 Membrane-associated sensor, integral membrane domain ambt_12410 PF00990 Diguanylate cyclase, GGDEF domain ambt_12415 PF00474 Sodium:solute symporter family ambt_12420 PF01507 Phosphoadenosine phosphosulfate reductase family ambt_12430 PF00459 Inositol monophosphatase family ambt_12435 PF00009 Elongation factor Tu GTP binding domain ambt_12440 PF02080 TrkA-C domain ambt_12440 PF03600 Citrate transporter ambt_12465 PF00733 Asparagine synthase ambt_12465 PF13537 Glutamine amidotransferase domain ambt_12475 PF04055 Radical SAM superfamily ambt_12480 PF06508 Queuosine biosynthesis protein QueC ambt_12500 PF02151 UvrB/uvrC motif ambt_12500 PF04851 Type III restriction enzyme, res subunit ambt_12500 PF17757 UvrB interaction domain ambt_12500 PF00271 Helicase conserved C-terminal domain ambt_12500 PF12344 Ultra-violet resistance protein B ambt_12505 PF01554 MatE ambt_12510 PF02508 Rnf-Nqr subunit, membrane protein ambt_12515 PF04060 Putative Fe-S cluster ambt_12520 PF12838 4Fe-4S dicluster domain ambt_12520 PF10531 SLBB domain ambt_12520 PF13375 RnfC Barrel sandwich hybrid domain ambt_12520 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ambt_12525 PF03116 NQR2, RnfD, RnfE family ambt_12535 PF02508 Rnf-Nqr subunit, membrane protein ambt_12540 PF10576 Iron-sulfur binding domain of endonuclease III ambt_12540 PF00730 HhH-GPD superfamily base excision DNA repair protein ambt_12540 PF00633 Helix-hairpin-helix motif ambt_12545 PF00561 alpha/beta hydrolase fold ambt_12550 PF00326 Prolyl oligopeptidase family ambt_12550 PF07676 WD40-like Beta Propeller Repeat ambt_12555 PF02225 PA domain ambt_12555 PF04389 Peptidase family M28 ambt_12565 PF00563 EAL domain ambt_12565 PF03707 Bacterial signalling protein N terminal repeat ambt_12565 PF00990 Diguanylate cyclase, GGDEF domain ambt_12575 PF00313 'Cold-shock' DNA-binding domain ambt_12580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ambt_12585 PF03009 Glycerophosphoryl diester phosphodiesterase family ambt_12590 PF18393 MotY N-terminal domain ambt_12590 PF00691 OmpA family ambt_12595 PF00929 Exonuclease ambt_12600 PF00578 AhpC/TSA family ambt_12600 PF10417 C-terminal domain of 1-Cys peroxiredoxin ambt_12605 PF04324 BFD-like [2Fe-2S] binding domain ambt_12625 PF00593 TonB dependent receptor ambt_12625 PF07715 TonB-dependent Receptor Plug Domain ambt_12630 PF00462 Glutaredoxin ambt_12640 PF06798 PrkA serine protein kinase C-terminal domain ambt_12640 PF08298 PrkA AAA domain ambt_12645 PF04285 Protein of unknown function (DUF444) ambt_12650 PF04293 SpoVR like protein ambt_12665 PF01264 Chorismate synthase ambt_12670 PF05175 Methyltransferase small domain ambt_12675 PF01713 Smr domain ambt_12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_12685 PF00512 His Kinase A (phospho-acceptor) domain ambt_12685 PF00989 PAS fold ambt_12690 PF02954 Bacterial regulatory protein, Fis family ambt_12690 PF00072 Response regulator receiver domain ambt_12690 PF00158 Sigma-54 interaction domain ambt_12695 PF00005 ABC transporter ambt_12695 PF12704 MacB-like periplasmic core domain ambt_12695 PF02687 FtsX-like permease family ambt_12705 PF00005 ABC transporter ambt_12710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_12730 PF04262 Glutamate-cysteine ligase ambt_12735 PF05193 Peptidase M16 inactive domain ambt_12735 PF00675 Insulinase (Peptidase family M16) ambt_12745 PF00849 RNA pseudouridylate synthase ambt_12750 PF02558 Ketopantoate reductase PanE/ApbA ambt_12750 PF08546 Ketopantoate reductase PanE/ApbA C terminal ambt_12755 PF01336 OB-fold nucleic acid binding domain ambt_12755 PF00152 tRNA synthetases class II (D, K and N) ambt_12760 PF00472 RF-1 domain ambt_12760 PF03462 PCRF domain ambt_12765 PF08281 Sigma-70, region 4 ambt_12765 PF04542 Sigma-70 region 2 ambt_12785 PF01966 HD domain ambt_12790 PF06155 Protein of unknown function (DUF971) ambt_12790 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ambt_12805 PF03707 Bacterial signalling protein N terminal repeat ambt_12805 PF00563 EAL domain ambt_12805 PF00990 Diguanylate cyclase, GGDEF domain ambt_12810 PF03485 Arginyl tRNA synthetase N terminal domain ambt_12810 PF05746 DALR anticodon binding domain ambt_12810 PF00750 tRNA synthetases class I (R) ambt_12815 PF03144 Elongation factor Tu domain 2 ambt_12815 PF16658 Class II release factor RF3, C-terminal domain ambt_12815 PF00009 Elongation factor Tu GTP binding domain ambt_12830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_12830 PF03466 LysR substrate binding domain ambt_12835 PF13808 DDE_Tnp_1-associated ambt_12835 PF01609 Transposase DDE domain ambt_12860 PF00583 Acetyltransferase (GNAT) family ambt_12905 PF05127 Helicase ambt_12905 PF13718 GNAT acetyltransferase 2 ambt_12905 PF17176 tRNA-binding domain ambt_12905 PF08351 Domain of unknown function (DUF1726) ambt_12915 PF03544 Gram-negative bacterial TonB protein C-terminal ambt_12920 PF02472 Biopolymer transport protein ExbD/TolR ambt_12925 PF01618 MotA/TolQ/ExbB proton channel family ambt_12930 PF01618 MotA/TolQ/ExbB proton channel family ambt_12965 PF00593 TonB dependent receptor ambt_12965 PF07715 TonB-dependent Receptor Plug Domain ambt_12970 PF00593 TonB dependent receptor ambt_12975 PF03301 Tryptophan 2,3-dioxygenase ambt_12985 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ambt_12985 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ambt_12990 PF01037 Lrp/AsnC ligand binding domain ambt_12995 PF14497 Glutathione S-transferase, C-terminal domain ambt_12995 PF02798 Glutathione S-transferase, N-terminal domain ambt_13005 PF00158 Sigma-54 interaction domain ambt_13005 PF18024 Helix-turn-helix domain ambt_13010 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ambt_13020 PF06667 Phage shock protein B ambt_13025 PF04012 PspA/IM30 family ambt_13030 PF02954 Bacterial regulatory protein, Fis family ambt_13030 PF00158 Sigma-54 interaction domain ambt_13035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ambt_13040 PF00528 Binding-protein-dependent transport system inner membrane component ambt_13045 PF00528 Binding-protein-dependent transport system inner membrane component ambt_13045 PF12911 N-terminal TM domain of oligopeptide transport permease C ambt_13050 PF00005 ABC transporter ambt_13050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ambt_13055 PF00005 ABC transporter ambt_13060 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ambt_13065 PF00364 Biotin-requiring enzyme ambt_13065 PF00682 HMGL-like ambt_13065 PF02436 Conserved carboxylase domain ambt_13080 PF02599 Global regulator protein family ambt_13105 PF01431 Peptidase family M13 ambt_13105 PF05649 Peptidase family M13 ambt_13110 PF13977 BetI-type transcriptional repressor, C-terminal ambt_13110 PF00440 Bacterial regulatory proteins, tetR family ambt_13120 PF01740 STAS domain ambt_13120 PF00916 Sulfate permease family ambt_13125 PF00484 Carbonic anhydrase ambt_13130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_13130 PF03466 LysR substrate binding domain ambt_13135 PF03466 LysR substrate binding domain ambt_13135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_13140 PF02743 Cache domain ambt_13140 PF00672 HAMP domain ambt_13140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_13150 PF00809 Pterin binding enzyme ambt_13150 PF02965 Vitamin B12 dependent methionine synthase, activation domain ambt_13150 PF02607 B12 binding domain ambt_13150 PF02574 Homocysteine S-methyltransferase ambt_13150 PF02310 B12 binding domain ambt_13155 PF02574 Homocysteine S-methyltransferase ambt_13155 PF02965 Vitamin B12 dependent methionine synthase, activation domain ambt_13155 PF02310 B12 binding domain ambt_13155 PF00809 Pterin binding enzyme ambt_13155 PF02607 B12 binding domain ambt_13160 PF04204 Homoserine O-succinyltransferase ambt_13170 PF01584 CheW-like domain ambt_13180 PF13614 AAA domain ambt_13185 PF00072 Response regulator receiver domain ambt_13185 PF01339 CheB methylesterase ambt_13190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_13190 PF01627 Hpt domain ambt_13190 PF01584 CheW-like domain ambt_13190 PF02895 Signal transducing histidine kinase, homodimeric domain ambt_13190 PF07194 P2 response regulator binding domain ambt_13195 PF04344 Chemotaxis phosphatase, CheZ ambt_13200 PF00072 Response regulator receiver domain ambt_13205 PF04542 Sigma-70 region 2 ambt_13205 PF04539 Sigma-70 region 3 ambt_13205 PF04545 Sigma-70, region 4 ambt_13210 PF10609 NUBPL iron-transfer P-loop NTPase ambt_13215 PF00448 SRP54-type protein, GTPase domain ambt_13220 PF00771 FHIPEP family ambt_13225 PF01312 FlhB HrpN YscU SpaS Family ambt_13230 PF01311 Bacterial export proteins, family 1 ambt_13235 PF01313 Bacterial export proteins, family 3 ambt_13240 PF00813 FliP family ambt_13245 PF04347 Flagellar biosynthesis protein, FliO ambt_13250 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ambt_13255 PF02154 Flagellar motor switch protein FliM ambt_13255 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ambt_13275 PF18269 T3SS EscN ATPase C-terminal domain ambt_13275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ambt_13285 PF14842 FliG N-terminal domain ambt_13285 PF14841 FliG middle domain ambt_13285 PF01706 FliG C-terminal domain ambt_13290 PF08345 Flagellar M-ring protein C-terminal ambt_13290 PF01514 Secretory protein of YscJ/FliF family ambt_13295 PF02049 Flagellar hook-basal body complex protein FliE ambt_13300 PF02954 Bacterial regulatory protein, Fis family ambt_13300 PF00158 Sigma-54 interaction domain ambt_13305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_13305 PF00512 His Kinase A (phospho-acceptor) domain ambt_13305 PF00989 PAS fold ambt_13310 PF02954 Bacterial regulatory protein, Fis family ambt_13310 PF00072 Response regulator receiver domain ambt_13310 PF00158 Sigma-54 interaction domain ambt_13315 PF00700 Bacterial flagellin C-terminal helical region ambt_13315 PF00669 Bacterial flagellin N-terminal helical region ambt_13315 PF08884 Flagellin D3 domain ambt_13320 PF02719 Polysaccharide biosynthesis protein ambt_13325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ambt_13330 PF02348 Cytidylyltransferase ambt_13340 PF03102 NeuB family ambt_13340 PF08666 SAF domain ambt_13355 PF16177 Acetyl-coenzyme A synthetase N-terminus ambt_13355 PF00501 AMP-binding enzyme ambt_13355 PF13193 AMP-binding enzyme C-terminal domain ambt_13365 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ambt_13375 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ambt_13380 PF08889 WbqC-like protein family ambt_13390 PF05721 Phytanoyl-CoA dioxygenase (PhyH) ambt_13395 PF01209 ubiE/COQ5 methyltransferase family ambt_13405 PF17102 Stealth protein CR3, conserved region 3 ambt_13405 PF11380 Stealth protein CR2, conserved region 2 ambt_13405 PF17101 Stealth protein CR1, conserved region 1 ambt_13420 PF02561 Flagellar protein FliS ambt_13425 PF02465 Flagellar hook-associated protein 2 N-terminus ambt_13425 PF07195 Flagellar hook-associated protein 2 C-terminus ambt_13425 PF07196 Flagellin hook IN motif ambt_13430 PF03646 FlaG protein ambt_13435 PF00700 Bacterial flagellin C-terminal helical region ambt_13435 PF07196 Flagellin hook IN motif ambt_13435 PF00669 Bacterial flagellin N-terminal helical region ambt_13445 PF00700 Bacterial flagellin C-terminal helical region ambt_13445 PF07196 Flagellin hook IN motif ambt_13445 PF00669 Bacterial flagellin N-terminal helical region ambt_13450 PF00669 Bacterial flagellin N-terminal helical region ambt_13450 PF07196 Flagellin hook IN motif ambt_13450 PF00700 Bacterial flagellin C-terminal helical region ambt_13470 PF10135 Rod binding protein ambt_13470 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ambt_13475 PF02119 Flagellar P-ring protein ambt_13480 PF02107 Flagellar L-ring protein ambt_13485 PF00460 Flagella basal body rod protein ambt_13485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ambt_13490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ambt_13490 PF00460 Flagella basal body rod protein ambt_13495 PF07559 Flagellar basal body protein FlaE ambt_13495 PF00460 Flagella basal body rod protein ambt_13495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ambt_13500 PF13861 FlgD Tudor-like domain ambt_13500 PF13860 FlgD Ig-like domain ambt_13500 PF03963 Flagellar hook capping protein - N-terminal region ambt_13505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ambt_13505 PF00460 Flagella basal body rod protein ambt_13510 PF00460 Flagella basal body rod protein ambt_13515 PF03705 CheR methyltransferase, all-alpha domain ambt_13515 PF01739 CheR methyltransferase, SAM binding domain ambt_13520 PF01584 CheW-like domain ambt_13520 PF00072 Response regulator receiver domain ambt_13560 PF00072 Response regulator receiver domain ambt_13560 PF00196 Bacterial regulatory proteins, luxR family ambt_13565 PF00529 HlyD membrane-fusion protein of T1SS ambt_13565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_13570 PF03412 Peptidase C39 family ambt_13570 PF00005 ABC transporter ambt_13570 PF00664 ABC transporter transmembrane region ambt_13575 PF00691 OmpA family ambt_13575 PF00223 Photosystem I psaA/psaB protein ambt_13585 PF01713 Smr domain ambt_13595 PF02769 AIR synthase related protein, C-terminal domain ambt_13595 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ambt_13595 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ambt_13600 PF01464 Transglycosylase SLT domain ambt_13600 PF00497 Bacterial extracellular solute-binding proteins, family 3 ambt_13605 PF14437 MafB19-like deaminase ambt_13615 PF02254 TrkA-N domain ambt_13615 PF02080 TrkA-C domain ambt_13615 PF00999 Sodium/hydrogen exchanger family ambt_13620 PF00563 EAL domain ambt_13620 PF00990 Diguanylate cyclase, GGDEF domain ambt_13620 PF03707 Bacterial signalling protein N terminal repeat ambt_13625 PF11734 TilS substrate C-terminal domain ambt_13625 PF01171 PP-loop family ambt_13625 PF09179 TilS substrate binding domain ambt_13630 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ambt_13635 PF01336 OB-fold nucleic acid binding domain ambt_13635 PF02811 PHP domain ambt_13635 PF14579 Helix-hairpin-helix motif ambt_13635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ambt_13635 PF07733 Bacterial DNA polymerase III alpha NTPase domain ambt_13640 PF01351 Ribonuclease HII ambt_13645 PF02684 Lipid-A-disaccharide synthetase ambt_13650 PF00132 Bacterial transferase hexapeptide (six repeats) ambt_13650 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ambt_13655 PF07977 FabA-like domain ambt_13665 PF01103 Surface antigen ambt_13665 PF07244 Surface antigen variable number repeat ambt_13670 PF02163 Peptidase family M50 ambt_13670 PF17820 PDZ domain ambt_13675 PF13288 DXP reductoisomerase C-terminal domain ambt_13675 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ambt_13675 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ambt_13685 PF01255 Putative undecaprenyl diphosphate synthase ambt_13690 PF01765 Ribosome recycling factor ambt_13695 PF00696 Amino acid kinase family ambt_13700 PF00889 Elongation factor TS ambt_13705 PF00318 Ribosomal protein S2 ambt_13710 PF00557 Metallopeptidase family M24 ambt_13720 PF00132 Bacterial transferase hexapeptide (six repeats) ambt_13720 PF14602 Hexapeptide repeat of succinyl-transferase ambt_13720 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ambt_13725 PF00258 Flavodoxin ambt_13730 PF00849 RNA pseudouridylate synthase ambt_13760 PF00717 Peptidase S24-like ambt_13765 PF13438 Domain of unknown function (DUF4113) ambt_13765 PF00817 impB/mucB/samB family ambt_13765 PF11799 impB/mucB/samB family C-terminal domain ambt_13790 PF07348 Syd protein (SUKH-2) ambt_13795 PF14489 QueF-like protein ambt_13795 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ambt_13800 PF00990 Diguanylate cyclase, GGDEF domain ambt_13800 PF00072 Response regulator receiver domain ambt_13805 PF03641 Possible lysine decarboxylase ambt_13805 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ambt_13805 PF11892 Domain of unknown function (DUF3412) ambt_13820 PF00180 Isocitrate/isopropylmalate dehydrogenase ambt_13820 PF18324 Hypothetical protein TT1725 ambt_13825 PF10531 SLBB domain ambt_13830 PF00483 Nucleotidyl transferase ambt_13840 PF00535 Glycosyl transferase family 2 ambt_13845 PF00953 Glycosyl transferase family 4 ambt_13855 PF02563 Polysaccharide biosynthesis/export protein ambt_13855 PF10531 SLBB domain ambt_13860 PF01061 ABC-2 type transporter ambt_13865 PF00005 ABC transporter ambt_13875 PF00854 POT family ambt_13885 PF16363 GDP-mannose 4,6 dehydratase ambt_13890 PF04333 MlaA lipoprotein ambt_13900 PF03918 Cytochrome C biogenesis protein ambt_13905 PF08534 Redoxin ambt_13910 PF01578 Cytochrome C assembly protein ambt_13910 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ambt_13915 PF03100 CcmE ambt_13920 PF04995 Heme exporter protein D (CcmD) ambt_13925 PF01578 Cytochrome C assembly protein ambt_13930 PF03379 CcmB protein ambt_13935 PF00005 ABC transporter ambt_13950 PF12679 ABC-2 family transporter protein ambt_13955 PF00005 ABC transporter ambt_13960 PF00154 recA bacterial DNA recombination protein ambt_13965 PF02464 Competence-damaged protein ambt_13970 PF01624 MutS domain I ambt_13970 PF05188 MutS domain II ambt_13970 PF05192 MutS domain III ambt_13970 PF05190 MutS family domain IV ambt_13970 PF00488 MutS domain V ambt_13975 PF06418 CTP synthase N-terminus ambt_13975 PF00117 Glutamine amidotransferase class-I ambt_13980 PF03952 Enolase, N-terminal domain ambt_13980 PF00113 Enolase, C-terminal TIM barrel domain ambt_13995 PF00561 alpha/beta hydrolase fold ambt_14000 PF00682 HMGL-like ambt_14000 PF08502 LeuA allosteric (dimerisation) domain ambt_14005 PF00180 Isocitrate/isopropylmalate dehydrogenase ambt_14010 PF00330 Aconitase family (aconitate hydratase) ambt_14015 PF00694 Aconitase C-terminal domain ambt_14020 PF01966 HD domain ambt_14020 PF00072 Response regulator receiver domain ambt_14030 PF01471 Putative peptidoglycan binding domain ambt_14030 PF13401 AAA domain ambt_14035 PF12627 Probable RNA and SrmB- binding site of polymerase A ambt_14035 PF01743 Poly A polymerase head domain ambt_14040 PF00270 DEAD/DEAH box helicase ambt_14040 PF00271 Helicase conserved C-terminal domain ambt_14045 PF01725 Ham1 family ambt_14050 PF06969 HemN C-terminal domain ambt_14050 PF04055 Radical SAM superfamily ambt_14075 PF00072 Response regulator receiver domain ambt_14080 PF04172 LrgB-like family ambt_14120 PF08494 DEAD/H associated ambt_14120 PF00270 DEAD/DEAH box helicase ambt_14120 PF00271 Helicase conserved C-terminal domain ambt_14175 PF00593 TonB dependent receptor ambt_14190 PF01734 Patatin-like phospholipase ambt_14205 PF13808 DDE_Tnp_1-associated ambt_14205 PF01609 Transposase DDE domain ambt_14220 PF00005 ABC transporter ambt_14220 PF12848 ABC transporter ambt_14230 PF01979 Amidohydrolase family ambt_14235 PF01869 BadF/BadG/BcrA/BcrD ATPase family ambt_14245 PF05230 MASE2 domain ambt_14245 PF00990 Diguanylate cyclase, GGDEF domain ambt_14250 PF13476 AAA domain ambt_14255 PF12320 Type 5 capsule protein repressor C-terminal domain ambt_14255 PF00149 Calcineurin-like phosphoesterase ambt_14260 PF08447 PAS fold ambt_14260 PF13426 PAS domain ambt_14260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_14265 PF09186 Domain of unknown function (DUF1949) ambt_14265 PF01205 Uncharacterized protein family UPF0029 ambt_14275 PF01433 Peptidase family M1 domain ambt_14280 PF02566 OsmC-like protein ambt_14285 PF01047 MarR family ambt_14305 PF03707 Bacterial signalling protein N terminal repeat ambt_14305 PF00563 EAL domain ambt_14305 PF00990 Diguanylate cyclase, GGDEF domain ambt_14310 PF03006 Haemolysin-III related ambt_14335 PF03466 LysR substrate binding domain ambt_14335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_14345 PF01384 Phosphate transporter family ambt_14350 PF01895 PhoU domain ambt_14355 PF00005 ABC transporter ambt_14360 PF00528 Binding-protein-dependent transport system inner membrane component ambt_14365 PF00528 Binding-protein-dependent transport system inner membrane component ambt_14375 PF02503 Polyphosphate kinase middle domain ambt_14375 PF13090 Polyphosphate kinase C-terminal domain 2 ambt_14375 PF17941 Polyphosphate kinase C-terminal domain 1 ambt_14375 PF13089 Polyphosphate kinase N-terminal domain ambt_14380 PF02541 Ppx/GppA phosphatase family ambt_14385 PF00274 Fructose-bisphosphate aldolase class-I ambt_14390 PF00162 Phosphoglycerate kinase ambt_14395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ambt_14395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ambt_14400 PF02780 Transketolase, C-terminal domain ambt_14400 PF02779 Transketolase, pyrimidine binding domain ambt_14400 PF00456 Transketolase, thiamine diphosphate binding domain ambt_14405 PF02773 S-adenosylmethionine synthetase, C-terminal domain ambt_14405 PF02772 S-adenosylmethionine synthetase, central domain ambt_14405 PF00438 S-adenosylmethionine synthetase, N-terminal domain ambt_14425 PF00465 Iron-containing alcohol dehydrogenase ambt_14430 PF06719 AraC-type transcriptional regulator N-terminus ambt_14430 PF12833 Helix-turn-helix domain ambt_14435 PF13458 Periplasmic binding protein ambt_14440 PF00512 His Kinase A (phospho-acceptor) domain ambt_14440 PF09308 LuxQ, periplasmic ambt_14440 PF00072 Response regulator receiver domain ambt_14440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_14445 PF03707 Bacterial signalling protein N terminal repeat ambt_14445 PF00990 Diguanylate cyclase, GGDEF domain ambt_14445 PF00563 EAL domain ambt_14455 PF00999 Sodium/hydrogen exchanger family ambt_14455 PF02080 TrkA-C domain ambt_14455 PF03471 Transporter associated domain ambt_14460 PF02355 Protein export membrane protein ambt_14460 PF07549 SecD/SecF GG Motif ambt_14480 PF12833 Helix-turn-helix domain ambt_14485 PF13333 Integrase core domain ambt_14485 PF00665 Integrase core domain ambt_14485 PF13276 HTH-like domain ambt_14490 PF01527 Transposase ambt_14510 PF00226 DnaJ domain ambt_14510 PF05099 Tellurite resistance protein TerB ambt_14515 PF01709 Transcriptional regulator ambt_14520 PF03969 AFG1-like ATPase ambt_14530 PF00595 PDZ domain ambt_14530 PF13180 PDZ domain ambt_14535 PF13180 PDZ domain ambt_14540 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ambt_14545 PF01722 BolA-like protein ambt_14550 PF13466 STAS domain ambt_14555 PF05494 MlaC protein ambt_14560 PF02470 MlaD protein ambt_14565 PF02405 Permease MlaE ambt_14570 PF00005 ABC transporter ambt_14575 PF01699 Sodium/calcium exchanger protein ambt_14580 PF00571 CBS domain ambt_14580 PF01380 SIS domain ambt_14600 PF00005 ABC transporter ambt_14600 PF12399 Branched-chain amino acid ATP-binding cassette transporter ambt_14605 PF00309 Sigma-54 factor, Activator interacting domain (AID) ambt_14605 PF04963 Sigma-54 factor, core binding domain ambt_14605 PF04552 Sigma-54, DNA binding domain ambt_14610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ambt_14615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ambt_14620 PF03668 P-loop ATPase protein family ambt_14625 PF00381 PTS HPr component phosphorylation site ambt_14630 PF03448 MgtE intracellular N domain ambt_14630 PF01769 Divalent cation transporter ambt_14630 PF00571 CBS domain ambt_14660 PF04386 Stringent starvation protein B ambt_14665 PF02798 Glutathione S-transferase, N-terminal domain ambt_14665 PF00043 Glutathione S-transferase, C-terminal domain ambt_14670 PF02167 Cytochrome C1 family ambt_14675 PF00033 Cytochrome b/b6/petB ambt_14675 PF00032 Cytochrome b(C-terminal)/b6/petD ambt_14680 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ambt_14680 PF00355 Rieske [2Fe-2S] domain ambt_14685 PF01546 Peptidase family M20/M25/M40 ambt_14695 PF07715 TonB-dependent Receptor Plug Domain ambt_14695 PF00593 TonB dependent receptor ambt_14705 PF08281 Sigma-70, region 4 ambt_14705 PF04542 Sigma-70 region 2 ambt_14710 PF00380 Ribosomal protein S9/S16 ambt_14715 PF00572 Ribosomal protein L13 ambt_14730 PF03819 MazG nucleotide pyrophosphohydrolase domain ambt_14735 PF04607 Region found in RelA / SpoT proteins ambt_14735 PF13291 ACT domain ambt_14735 PF02824 TGS domain ambt_14740 PF05958 tRNA (Uracil-5-)-methyltransferase ambt_14745 PF01648 4'-phosphopantetheinyl transferase superfamily ambt_14750 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ambt_14755 PF02565 Recombination protein O C terminal ambt_14755 PF11967 Recombination protein O N terminal ambt_14765 PF02272 DHHA1 domain ambt_14765 PF01368 DHH family ambt_14765 PF17768 RecJ OB domain ambt_14770 PF13098 Thioredoxin-like domain ambt_14770 PF10411 Disulfide bond isomerase protein N-terminus ambt_14775 PF02899 Phage integrase, N-terminal SAM-like domain ambt_14775 PF00589 Phage integrase family ambt_14780 PF05099 Tellurite resistance protein TerB ambt_14780 PF00226 DnaJ domain ambt_14785 PF04453 LPS transport system D ambt_14785 PF03968 OstA-like protein ambt_14790 PF00639 PPIC-type PPIASE domain ambt_14790 PF09312 SurA N-terminal domain ambt_14795 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ambt_14800 PF00398 Ribosomal RNA adenine dimethylase ambt_14805 PF04379 ApaG domain ambt_14810 PF00149 Calcineurin-like phosphoesterase ambt_14815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_14815 PF00672 HAMP domain ambt_14820 PF01842 ACT domain ambt_14820 PF00696 Amino acid kinase family ambt_14830 PF06434 Aconitate hydratase 2 N-terminus ambt_14830 PF11791 Aconitate B N-terminal domain ambt_14830 PF00330 Aconitase family (aconitate hydratase) ambt_14840 PF11791 Aconitate B N-terminal domain ambt_14840 PF00330 Aconitase family (aconitate hydratase) ambt_14840 PF06434 Aconitate hydratase 2 N-terminus ambt_14845 PF07995 Glucose / Sorbosone dehydrogenase ambt_14855 PF13193 AMP-binding enzyme C-terminal domain ambt_14855 PF00501 AMP-binding enzyme ambt_14860 PF00072 Response regulator receiver domain ambt_14860 PF00512 His Kinase A (phospho-acceptor) domain ambt_14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_14860 PF00672 HAMP domain ambt_14860 PF01627 Hpt domain ambt_14860 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ambt_14865 PF00072 Response regulator receiver domain ambt_14870 PF09411 Lipid A 3-O-deacylase (PagL) ambt_14880 PF03544 Gram-negative bacterial TonB protein C-terminal ambt_14885 PF02472 Biopolymer transport protein ExbD/TolR ambt_14890 PF01618 MotA/TolQ/ExbB proton channel family ambt_14895 PF01618 MotA/TolQ/ExbB proton channel family ambt_14920 PF12849 PBP superfamily domain ambt_14925 PF00512 His Kinase A (phospho-acceptor) domain ambt_14925 PF11808 Phosphate regulon sensor protein PhoR ambt_14925 PF00989 PAS fold ambt_14925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_14930 PF00486 Transcriptional regulatory protein, C terminal ambt_14930 PF00072 Response regulator receiver domain ambt_14935 PF00497 Bacterial extracellular solute-binding proteins, family 3 ambt_14935 PF00512 His Kinase A (phospho-acceptor) domain ambt_14935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_14940 PF04381 Putative exonuclease, RdgC ambt_14945 PF07883 Cupin domain ambt_14945 PF01381 Helix-turn-helix ambt_14950 PF03594 Benzoate membrane transport protein ambt_14965 PF01230 HIT domain ambt_14970 PF02673 Bacitracin resistance protein BacA ambt_14980 PF02152 Dihydroneopterin aldolase ambt_14985 PF02660 Glycerol-3-phosphate acyltransferase ambt_14995 PF00814 Glycoprotease family ambt_15000 PF01165 Ribosomal protein S21 ambt_15005 PF09424 Yqey-like protein ambt_15010 PF08278 DNA primase DnaG DnaB-binding ambt_15010 PF10410 DnaB-helicase binding domain of primase ambt_15010 PF08275 DNA primase catalytic core, N-terminal domain ambt_15010 PF01807 CHC2 zinc finger ambt_15015 PF04545 Sigma-70, region 4 ambt_15015 PF04546 Sigma-70, non-essential region ambt_15015 PF04542 Sigma-70 region 2 ambt_15015 PF03979 Sigma-70 factor, region 1.1 ambt_15015 PF04539 Sigma-70 region 3 ambt_15015 PF00140 Sigma-70 factor, region 1.2 ambt_15020 PF00672 HAMP domain ambt_15020 PF02743 Cache domain ambt_15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_15035 PF00873 AcrB/AcrD/AcrF family ambt_15040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_15045 PF00293 NUDIX domain ambt_15050 PF00596 Class II Aldolase and Adducin N-terminal domain ambt_15055 PF13378 Enolase C-terminal domain-like ambt_15055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ambt_15085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ambt_15085 PF12806 Acetyl-CoA dehydrogenase C-terminal like ambt_15085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ambt_15085 PF02770 Acyl-CoA dehydrogenase, middle domain ambt_15100 PF12801 4Fe-4S binding domain ambt_15100 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ambt_15100 PF13746 4Fe-4S dicluster domain ambt_15105 PF01636 Phosphotransferase enzyme family ambt_15110 PF07715 TonB-dependent Receptor Plug Domain ambt_15110 PF00593 TonB dependent receptor ambt_15115 PF01323 DSBA-like thioredoxin domain ambt_15130 PF00005 ABC transporter ambt_15135 PF00528 Binding-protein-dependent transport system inner membrane component ambt_15140 PF00005 ABC transporter ambt_15150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_15150 PF13426 PAS domain ambt_15150 PF08447 PAS fold ambt_15155 PF02885 Glycosyl transferase family, helical bundle domain ambt_15155 PF00591 Glycosyl transferase family, a/b domain ambt_15160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ambt_15160 PF14824 Sirohaem biosynthesis protein central ambt_15160 PF10414 Sirohaem synthase dimerisation region ambt_15170 PF01568 Molydopterin dinucleotide binding domain ambt_15170 PF00384 Molybdopterin oxidoreductase ambt_15170 PF04324 BFD-like [2Fe-2S] binding domain ambt_15170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ambt_15175 PF13806 Rieske-like [2Fe-2S] domain ambt_15180 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ambt_15180 PF18267 Rubredoxin NAD+ reductase C-terminal domain ambt_15180 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_15180 PF04324 BFD-like [2Fe-2S] binding domain ambt_15180 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ambt_15185 PF00916 Sulfate permease family ambt_15185 PF01740 STAS domain ambt_15195 PF03861 ANTAR domain ambt_15195 PF08376 Nitrate and nitrite sensing ambt_15205 PF01569 PAP2 superfamily ambt_15210 PF01722 BolA-like protein ambt_15220 PF05175 Methyltransferase small domain ambt_15225 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ambt_15240 PF07715 TonB-dependent Receptor Plug Domain ambt_15240 PF00593 TonB dependent receptor ambt_15245 PF00152 tRNA synthetases class II (D, K and N) ambt_15255 PF04055 Radical SAM superfamily ambt_15275 PF13419 Haloacid dehalogenase-like hydrolase ambt_15280 PF01590 GAF domain ambt_15280 PF00512 His Kinase A (phospho-acceptor) domain ambt_15280 PF00360 Phytochrome region ambt_15280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_15280 PF08446 PAS fold ambt_15285 PF08448 PAS fold ambt_15285 PF01339 CheB methylesterase ambt_15285 PF03705 CheR methyltransferase, all-alpha domain ambt_15285 PF01739 CheR methyltransferase, SAM binding domain ambt_15290 PF00986 DNA gyrase B subunit, carboxyl terminus ambt_15290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_15290 PF00204 DNA gyrase B ambt_15290 PF01751 Toprim domain ambt_15295 PF05728 Uncharacterised protein family (UPF0227) ambt_15310 PF00293 NUDIX domain ambt_15315 PF02321 Outer membrane efflux protein ambt_15330 PF00270 DEAD/DEAH box helicase ambt_15330 PF00271 Helicase conserved C-terminal domain ambt_15330 PF12343 Cold shock protein DEAD box A ambt_15330 PF03880 DbpA RNA binding domain ambt_15335 PF10414 Sirohaem synthase dimerisation region ambt_15335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ambt_15345 PF13638 PIN domain ambt_15345 PF02562 PhoH-like protein ambt_15350 PF00271 Helicase conserved C-terminal domain ambt_15350 PF00176 SNF2 family N-terminal domain ambt_15350 PF18339 RapA N-terminal Tudor like domain 1 ambt_15350 PF18337 RapA N-terminal Tudor like domain ambt_15350 PF12137 RNA polymerase recycling family C-terminal ambt_15355 PF00849 RNA pseudouridylate synthase ambt_15370 PF07690 Major Facilitator Superfamily ambt_15375 PF00072 Response regulator receiver domain ambt_15375 PF09308 LuxQ, periplasmic ambt_15375 PF00512 His Kinase A (phospho-acceptor) domain ambt_15375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_15380 PF07694 5TMR of 5TMR-LYT ambt_15380 PF00990 Diguanylate cyclase, GGDEF domain ambt_15385 PF01339 CheB methylesterase ambt_15385 PF00072 Response regulator receiver domain ambt_15390 PF00303 Thymidylate synthase ambt_15395 PF01790 Prolipoprotein diacylglyceryl transferase ambt_15400 PF01925 Sulfite exporter TauE/SafE ambt_15405 PF00391 PEP-utilising enzyme, mobile domain ambt_15405 PF02896 PEP-utilising enzyme, TIM barrel domain ambt_15405 PF01590 GAF domain ambt_15405 PF05524 PEP-utilising enzyme, N-terminal ambt_15410 PF00293 NUDIX domain ambt_15415 PF02976 DNA mismatch repair enzyme MutH ambt_15425 PF01928 CYTH domain ambt_15430 PF08239 Bacterial SH3 domain ambt_15435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_15435 PF00512 His Kinase A (phospho-acceptor) domain ambt_15435 PF00672 HAMP domain ambt_15440 PF00072 Response regulator receiver domain ambt_15440 PF00486 Transcriptional regulatory protein, C terminal ambt_15445 PF00873 AcrB/AcrD/AcrF family ambt_15450 PF13533 Biotin-lipoyl like ambt_15455 PF02321 Outer membrane efflux protein ambt_15460 PF00171 Aldehyde dehydrogenase family ambt_15460 PF01619 Proline dehydrogenase ambt_15460 PF14850 DNA-binding domain of Proline dehydrogenase ambt_15460 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ambt_15465 PF17200 Single Cache domain 2 ambt_15465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_15465 PF00672 HAMP domain ambt_15475 PF04977 Septum formation initiator ambt_15480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ambt_15485 PF02542 YgbB family ambt_15490 PF01142 tRNA pseudouridine synthase D (TruD) ambt_15495 PF01975 Survival protein SurE ambt_15505 PF09335 SNARE associated Golgi protein ambt_15510 PF01476 LysM domain ambt_15510 PF01551 Peptidase family M23 ambt_15515 PF04542 Sigma-70 region 2 ambt_15515 PF00140 Sigma-70 factor, region 1.2 ambt_15515 PF04539 Sigma-70 region 3 ambt_15515 PF04545 Sigma-70, region 4 ambt_15520 PF00186 Dihydrofolate reductase ambt_15530 PF01926 50S ribosome-binding GTPase ambt_15530 PF01018 GTP1/OBG ambt_15535 PF01016 Ribosomal L27 protein ambt_15540 PF00829 Ribosomal prokaryotic L21 protein ambt_15545 PF00348 Polyprenyl synthetase ambt_15555 PF00557 Metallopeptidase family M24 ambt_15560 PF14718 Soluble lytic murein transglycosylase L domain ambt_15560 PF01464 Transglycosylase SLT domain ambt_15565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ambt_15565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ambt_15565 PF00378 Enoyl-CoA hydratase/isomerase ambt_15570 PF02803 Thiolase, C-terminal domain ambt_15570 PF00108 Thiolase, N-terminal domain ambt_15575 PF13495 Phage integrase, N-terminal SAM-like domain ambt_15575 PF00589 Phage integrase family ambt_15665 PF01548 Transposase ambt_15665 PF02371 Transposase IS116/IS110/IS902 family ambt_15690 PF03358 NADPH-dependent FMN reductase ambt_15700 PF00583 Acetyltransferase (GNAT) family ambt_15735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ambt_15750 PF00842 Alanine racemase, C-terminal domain ambt_15750 PF01168 Alanine racemase, N-terminal domain ambt_15755 PF01380 SIS domain ambt_15760 PF07075 Protein of unknown function (DUF1343) ambt_15775 PF00933 Glycosyl hydrolase family 3 N terminal domain ambt_15780 PF03553 Na+/H+ antiporter family ambt_15795 PF00171 Aldehyde dehydrogenase family ambt_15800 PF00709 Adenylosuccinate synthetase ambt_15805 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ambt_15815 PF00085 Thioredoxin ambt_15825 PF07995 Glucose / Sorbosone dehydrogenase ambt_15830 PF00210 Ferritin-like domain ambt_15835 PF04314 Copper chaperone PCu(A)C ambt_15840 PF02222 ATP-grasp domain ambt_15840 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ambt_15845 PF00731 AIR carboxylase ambt_15850 PF06965 Na+/H+ antiporter 1 ambt_15855 PF00072 Response regulator receiver domain ambt_15855 PF09308 LuxQ, periplasmic ambt_15855 PF00512 His Kinase A (phospho-acceptor) domain ambt_15855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_15860 PF07687 Peptidase dimerisation domain ambt_15860 PF01546 Peptidase family M20/M25/M40 ambt_15865 PF07497 Rho termination factor, RNA-binding domain ambt_15865 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ambt_15865 PF07498 Rho termination factor, N-terminal domain ambt_15870 PF00085 Thioredoxin ambt_15875 PF00271 Helicase conserved C-terminal domain ambt_15875 PF00270 DEAD/DEAH box helicase ambt_15880 PF02541 Ppx/GppA phosphatase family ambt_15885 PF00490 Delta-aminolevulinic acid dehydratase ambt_15890 PF00990 Diguanylate cyclase, GGDEF domain ambt_15890 PF07694 5TMR of 5TMR-LYT ambt_15895 PF01026 TatD related DNase ambt_15905 PF00902 Sec-independent protein translocase protein (TatC) ambt_15910 PF02416 mttA/Hcf106 family ambt_15915 PF02416 mttA/Hcf106 family ambt_15925 PF10369 Small subunit of acetolactate synthase ambt_15930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ambt_15930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ambt_15930 PF00205 Thiamine pyrophosphate enzyme, central domain ambt_15945 PF13181 Tetratricopeptide repeat ambt_15965 PF00929 Exonuclease ambt_15970 PF03193 RsgA GTPase ambt_15975 PF02666 Phosphatidylserine decarboxylase ambt_15985 PF03009 Glycerophosphoryl diester phosphodiesterase family ambt_15995 PF04748 Divergent polysaccharide deacetylase ambt_16005 PF01551 Peptidase family M23 ambt_16015 PF00462 Glutaredoxin ambt_16020 PF02556 Preprotein translocase subunit SecB ambt_16025 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ambt_16025 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ambt_16030 PF00588 SpoU rRNA Methylase family ambt_16035 PF12146 Serine aminopeptidase, S33 ambt_16040 PF16527 Two-component sensor protein CpxA, periplasmic domain ambt_16040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_16040 PF00512 His Kinase A (phospho-acceptor) domain ambt_16040 PF00672 HAMP domain ambt_16045 PF00486 Transcriptional regulatory protein, C terminal ambt_16045 PF00072 Response regulator receiver domain ambt_16060 PF02107 Flagellar L-ring protein ambt_16070 PF02142 MGS-like domain ambt_16075 PF01118 Semialdehyde dehydrogenase, NAD binding domain ambt_16075 PF02774 Semialdehyde dehydrogenase, dimerisation domain ambt_16080 PF00696 Amino acid kinase family ambt_16085 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ambt_16085 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ambt_16090 PF00764 Arginosuccinate synthase ambt_16095 PF14698 Argininosuccinate lyase C-terminal ambt_16095 PF00206 Lyase ambt_16100 PF00583 Acetyltransferase (GNAT) family ambt_16100 PF00696 Amino acid kinase family ambt_16105 PF03707 Bacterial signalling protein N terminal repeat ambt_16105 PF00990 Diguanylate cyclase, GGDEF domain ambt_16105 PF00563 EAL domain ambt_16130 PF02798 Glutathione S-transferase, N-terminal domain ambt_16140 PF03949 Malic enzyme, NAD binding domain ambt_16140 PF00390 Malic enzyme, N-terminal domain ambt_16145 PF17092 Penicillin-binding protein OB-like domain ambt_16145 PF00905 Penicillin binding protein transpeptidase domain ambt_16145 PF00912 Transglycosylase ambt_16170 PF11741 AMIN domain ambt_16170 PF00263 Bacterial type II and III secretion system protein ambt_16170 PF03958 Bacterial type II/III secretion system short domain ambt_16170 PF07660 Secretin and TonB N terminus short domain ambt_16175 PF01202 Shikimate kinase ambt_16180 PF01761 3-dehydroquinate synthase ambt_16195 PF02086 D12 class N6 adenine-specific DNA methyltransferase ambt_16220 PF00834 Ribulose-phosphate 3 epimerase family ambt_16225 PF00579 tRNA synthetases class I (W and Y) ambt_16230 PF00117 Glutamine amidotransferase class-I ambt_16240 PF00202 Aminotransferase class-III ambt_16245 PF04958 Arginine N-succinyltransferase beta subunit ambt_16250 PF00171 Aldehyde dehydrogenase family ambt_16260 PF03707 Bacterial signalling protein N terminal repeat ambt_16260 PF00990 Diguanylate cyclase, GGDEF domain ambt_16260 PF00563 EAL domain ambt_16270 PF00521 DNA gyrase/topoisomerase IV, subunit A ambt_16270 PF03989 DNA gyrase C-terminal domain, beta-propeller ambt_16275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_16275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ambt_16275 PF00512 His Kinase A (phospho-acceptor) domain ambt_16275 PF00072 Response regulator receiver domain ambt_16275 PF01627 Hpt domain ambt_16275 PF00672 HAMP domain ambt_16285 PF00873 AcrB/AcrD/AcrF family ambt_16290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_16295 PF00440 Bacterial regulatory proteins, tetR family ambt_16300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ambt_16300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ambt_16305 PF00202 Aminotransferase class-III ambt_16310 PF00211 Adenylate and Guanylate cyclase catalytic domain ambt_16310 PF00672 HAMP domain ambt_16315 PF04261 Dyp-type peroxidase family ambt_16325 PF00909 Ammonium Transporter Family ambt_16330 PF00543 Nitrogen regulatory protein P-II ambt_16345 PF12833 Helix-turn-helix domain ambt_16350 PF05661 Protein of unknown function (DUF808) ambt_16365 PF00905 Penicillin binding protein transpeptidase domain ambt_16365 PF14814 Bifunctional transglycosylase second domain ambt_16365 PF00912 Transglycosylase ambt_16375 PF13406 Transglycosylase SLT domain ambt_16405 PF01695 IstB-like ATP binding protein ambt_16435 PF04408 Helicase associated domain (HA2) ambt_16435 PF00271 Helicase conserved C-terminal domain ambt_16435 PF08482 ATP-dependent helicase C-terminal ambt_16435 PF00270 DEAD/DEAH box helicase ambt_16445 PF00551 Formyl transferase ambt_16445 PF01842 ACT domain ambt_16455 PF01432 Peptidase family M3 ambt_16460 PF02743 Cache domain ambt_16460 PF00672 HAMP domain ambt_16460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_16480 PF00534 Glycosyl transferases group 1 ambt_16480 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ambt_16485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ambt_16490 PF13439 Glycosyltransferase Family 4 ambt_16490 PF00534 Glycosyl transferases group 1 ambt_16495 PF00366 Ribosomal protein S17 ambt_16500 PF00831 Ribosomal L29 protein ambt_16505 PF00252 Ribosomal protein L16p/L10e ambt_16510 PF07650 KH domain ambt_16510 PF00189 Ribosomal protein S3, C-terminal domain ambt_16515 PF00237 Ribosomal protein L22p/L17e ambt_16520 PF00203 Ribosomal protein S19 ambt_16525 PF03947 Ribosomal Proteins L2, C-terminal domain ambt_16525 PF00181 Ribosomal Proteins L2, RNA binding domain ambt_16530 PF00276 Ribosomal protein L23 ambt_16535 PF00573 Ribosomal protein L4/L1 family ambt_16540 PF00297 Ribosomal protein L3 ambt_16545 PF00338 Ribosomal protein S10p/S20e ambt_16550 PF00437 Type II/IV secretion system protein ambt_16560 PF00694 Aconitase C-terminal domain ambt_16560 PF00330 Aconitase family (aconitate hydratase) ambt_16565 PF00300 Histidine phosphatase superfamily (branch 1) ambt_16570 PF00465 Iron-containing alcohol dehydrogenase ambt_16610 PF00732 GMC oxidoreductase ambt_16610 PF05199 GMC oxidoreductase ambt_16620 PF03825 Nucleoside H+ symporter ambt_16630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ambt_16630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ambt_16635 PF00356 Bacterial regulatory proteins, lacI family ambt_16660 PF13426 PAS domain ambt_16660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_16660 PF00072 Response regulator receiver domain ambt_16660 PF08448 PAS fold ambt_16660 PF00512 His Kinase A (phospho-acceptor) domain ambt_16670 PF13419 Haloacid dehalogenase-like hydrolase ambt_16680 PF01204 Trehalase ambt_16690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ambt_16690 PF00356 Bacterial regulatory proteins, lacI family ambt_16705 PF01435 Peptidase family M48 ambt_16720 PF01339 CheB methylesterase ambt_16720 PF00072 Response regulator receiver domain ambt_16725 PF03975 CheD chemotactic sensory transduction ambt_16730 PF01739 CheR methyltransferase, SAM binding domain ambt_16730 PF03705 CheR methyltransferase, all-alpha domain ambt_16735 PF08447 PAS fold ambt_16735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_16735 PF13426 PAS domain ambt_16740 PF01584 CheW-like domain ambt_16745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_16745 PF02895 Signal transducing histidine kinase, homodimeric domain ambt_16745 PF09078 CheY binding ambt_16745 PF01584 CheW-like domain ambt_16745 PF01627 Hpt domain ambt_16750 PF00072 Response regulator receiver domain ambt_16755 PF17200 Single Cache domain 2 ambt_16755 PF00672 HAMP domain ambt_16755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_16765 PF00486 Transcriptional regulatory protein, C terminal ambt_16765 PF00072 Response regulator receiver domain ambt_16770 PF00672 HAMP domain ambt_16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_16770 PF00512 His Kinase A (phospho-acceptor) domain ambt_16770 PF16750 Sensor domain of 2-component histidine kinase ambt_16820 PF00753 Metallo-beta-lactamase superfamily ambt_16820 PF16123 Hydroxyacylglutathione hydrolase C-terminus ambt_16835 PF00717 Peptidase S24-like ambt_16840 PF00817 impB/mucB/samB family ambt_16840 PF13438 Domain of unknown function (DUF4113) ambt_16840 PF11799 impB/mucB/samB family C-terminal domain ambt_16860 PF00589 Phage integrase family ambt_16860 PF02899 Phage integrase, N-terminal SAM-like domain ambt_16865 PF17862 AAA+ lid domain ambt_16865 PF01434 Peptidase family M41 ambt_16865 PF00004 ATPase family associated with various cellular activities (AAA) ambt_16940 PF08774 VRR-NUC domain ambt_16940 PF04851 Type III restriction enzyme, res subunit ambt_16945 PF01555 DNA methylase ambt_16945 PF18273 Type III R-M EcoP15I C-terminal domain ambt_17005 PF01695 IstB-like ATP binding protein ambt_17010 PF00665 Integrase core domain ambt_17020 PF02796 Helix-turn-helix domain of resolvase ambt_17020 PF00239 Resolvase, N terminal domain ambt_17055 PF04362 Bacterial Fe(2+) trafficking ambt_17060 PF10576 Iron-sulfur binding domain of endonuclease III ambt_17060 PF00633 Helix-hairpin-helix motif ambt_17060 PF14815 NUDIX domain ambt_17060 PF00730 HhH-GPD superfamily base excision DNA repair protein ambt_17070 PF02390 Putative methyltransferase ambt_17075 PF08468 Methyltransferase small domain N-terminal ambt_17075 PF05175 Methyltransferase small domain ambt_17080 PF08323 Starch synthase catalytic domain ambt_17080 PF00534 Glycosyl transferases group 1 ambt_17085 PF00497 Bacterial extracellular solute-binding proteins, family 3 ambt_17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_17085 PF00512 His Kinase A (phospho-acceptor) domain ambt_17090 PF00072 Response regulator receiver domain ambt_17090 PF00486 Transcriptional regulatory protein, C terminal ambt_17095 PF00703 Glycosyl hydrolases family 2 ambt_17095 PF02837 Glycosyl hydrolases family 2, sugar binding domain ambt_17095 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ambt_17095 PF16353 Domain of unknown function(DUF4981) ambt_17095 PF02929 Beta galactosidase small chain ambt_17105 PF01523 Putative modulator of DNA gyrase ambt_17110 PF04751 Protein of unknown function (DUF615) ambt_17120 PF01523 Putative modulator of DNA gyrase ambt_17125 PF00795 Carbon-nitrogen hydrolase ambt_17135 PF00575 S1 RNA binding domain ambt_17135 PF10150 Ribonuclease E/G family ambt_17140 PF02545 Maf-like protein ambt_17145 PF04093 rod shape-determining protein MreD ambt_17150 PF04085 rod shape-determining protein MreC ambt_17180 PF00114 Pilin (bacterial filament) ambt_17180 PF07963 Prokaryotic N-terminal methylation motif ambt_17185 PF00114 Pilin (bacterial filament) ambt_17185 PF07963 Prokaryotic N-terminal methylation motif ambt_17195 PF00482 Type II secretion system (T2SS), protein F ambt_17200 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ambt_17200 PF00437 Type II/IV secretion system protein ambt_17210 PF13401 AAA domain ambt_17210 PF01471 Putative peptidoglycan binding domain ambt_17215 PF03958 Bacterial type II/III secretion system short domain ambt_17215 PF00263 Bacterial type II and III secretion system protein ambt_17245 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ambt_17245 PF01266 FAD dependent oxidoreductase ambt_17250 PF00455 DeoR C terminal sensor domain ambt_17250 PF08220 DeoR-like helix-turn-helix domain ambt_17255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ambt_17255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ambt_17275 PF00474 Sodium:solute symporter family ambt_17280 PF04820 Tryptophan halogenase ambt_17295 PF16875 Glycosyl hydrolase family 36 N-terminal domain ambt_17295 PF16874 Glycosyl hydrolase family 36 C-terminal domain ambt_17325 PF08668 HDOD domain ambt_17325 PF00563 EAL domain ambt_17335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_17335 PF00512 His Kinase A (phospho-acceptor) domain ambt_17335 PF09456 RcsC Alpha-Beta-Loop (ABL) ambt_17335 PF00072 Response regulator receiver domain ambt_17340 PF00072 Response regulator receiver domain ambt_17340 PF00486 Transcriptional regulatory protein, C terminal ambt_17355 PF00436 Single-strand binding protein family ambt_17360 PF00474 Sodium:solute symporter family ambt_17370 PF08544 GHMP kinases C terminal ambt_17370 PF10509 Galactokinase galactose-binding signature ambt_17370 PF00288 GHMP kinases N terminal domain ambt_17375 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ambt_17375 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ambt_17385 PF00356 Bacterial regulatory proteins, lacI family ambt_17395 PF13419 Haloacid dehalogenase-like hydrolase ambt_17400 PF07690 Major Facilitator Superfamily ambt_17405 PF00005 ABC transporter ambt_17405 PF17755 UvrA DNA-binding domain ambt_17405 PF17760 UvrA interaction domain ambt_17430 PF00719 Inorganic pyrophosphatase ambt_17435 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ambt_17440 PF02875 Mur ligase family, glutamate ligase domain ambt_17440 PF01225 Mur ligase family, catalytic domain ambt_17440 PF08245 Mur ligase middle domain ambt_17445 PF02441 Flavoprotein ambt_17455 PF03737 Aldolase/RraA ambt_17460 PF01569 PAP2 superfamily ambt_17475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ambt_17475 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ambt_17480 PF01678 Diaminopimelate epimerase ambt_17490 PF02899 Phage integrase, N-terminal SAM-like domain ambt_17490 PF00589 Phage integrase family ambt_17495 PF13419 Haloacid dehalogenase-like hydrolase ambt_17500 PF00132 Bacterial transferase hexapeptide (six repeats) ambt_17500 PF06426 Serine acetyltransferase, N-terminal ambt_17505 PF13361 UvrD-like helicase C-terminal domain ambt_17505 PF00580 UvrD/REP helicase N-terminal domain ambt_17510 PF00990 Diguanylate cyclase, GGDEF domain ambt_17510 PF00072 Response regulator receiver domain ambt_17515 PF00892 EamA-like transporter family ambt_17520 PF01769 Divalent cation transporter ambt_17520 PF00571 CBS domain ambt_17520 PF03448 MgtE intracellular N domain ambt_17525 PF03061 Thioesterase superfamily ambt_17530 PF00271 Helicase conserved C-terminal domain ambt_17530 PF00570 HRDC domain ambt_17530 PF16124 RecQ zinc-binding ambt_17530 PF09382 RQC domain ambt_17530 PF00270 DEAD/DEAH box helicase ambt_17575 PF00436 Single-strand binding protein family ambt_17585 PF01385 Probable transposase ambt_17585 PF12323 Helix-turn-helix domain ambt_17585 PF07282 Putative transposase DNA-binding domain ambt_17645 PF00440 Bacterial regulatory proteins, tetR family ambt_17655 PF00873 AcrB/AcrD/AcrF family ambt_17665 PF01814 Hemerythrin HHE cation binding domain ambt_17825 PF02798 Glutathione S-transferase, N-terminal domain ambt_17825 PF00043 Glutathione S-transferase, C-terminal domain ambt_17830 PF01817 Chorismate mutase type II ambt_17830 PF00800 Prephenate dehydratase ambt_17850 PF03050 Transposase IS66 family ambt_17860 PF03050 Transposase IS66 family ambt_17880 PF01323 DSBA-like thioredoxin domain ambt_17890 PF00866 Ring hydroxylating beta subunit ambt_17895 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ambt_17895 PF00355 Rieske [2Fe-2S] domain ambt_17900 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ambt_17910 PF00701 Dihydrodipicolinate synthetase family ambt_17915 PF00171 Aldehyde dehydrogenase family ambt_17920 PF00355 Rieske [2Fe-2S] domain ambt_17925 PF01557 Fumarylacetoacetate (FAA) hydrolase family ambt_17930 PF07883 Cupin domain ambt_17935 PF07729 FCD domain ambt_17935 PF00392 Bacterial regulatory proteins, gntR family ambt_17940 PF01557 Fumarylacetoacetate (FAA) hydrolase family ambt_17950 PF01557 Fumarylacetoacetate (FAA) hydrolase family ambt_17955 PF12728 Helix-turn-helix domain ambt_17955 PF02661 Fic/DOC family ambt_17970 PF13614 AAA domain ambt_17975 PF02195 ParB-like nuclease domain ambt_17975 PF17762 HTH domain found in ParB protein ambt_17980 PF01557 Fumarylacetoacetate (FAA) hydrolase family ambt_17985 PF07883 Cupin domain ambt_17990 PF13417 Glutathione S-transferase, N-terminal domain ambt_17995 PF03466 LysR substrate binding domain ambt_17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_18000 PF03466 LysR substrate binding domain ambt_18000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_18005 PF00355 Rieske [2Fe-2S] domain ambt_18005 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ambt_18010 PF13577 SnoaL-like domain ambt_18015 PF00355 Rieske [2Fe-2S] domain ambt_18035 PF00970 Oxidoreductase FAD-binding domain ambt_18035 PF00111 2Fe-2S iron-sulfur cluster binding domain ambt_18035 PF00175 Oxidoreductase NAD-binding domain ambt_18045 PF02253 Phospholipase A1 ambt_18050 PF02321 Outer membrane efflux protein ambt_18055 PF00873 AcrB/AcrD/AcrF family ambt_18105 PF04221 RelB antitoxin ambt_18110 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ambt_18115 PF12729 Four helix bundle sensory module for signal transduction ambt_18115 PF00672 HAMP domain ambt_18115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_18125 PF02798 Glutathione S-transferase, N-terminal domain ambt_18130 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ambt_18140 PF08448 PAS fold ambt_18140 PF00990 Diguanylate cyclase, GGDEF domain ambt_18140 PF00563 EAL domain ambt_18145 PF00925 GTP cyclohydrolase II ambt_18150 PF11737 Protein of unknown function (DUF3300) ambt_18155 PF01544 CorA-like Mg2+ transporter protein ambt_18160 PF12729 Four helix bundle sensory module for signal transduction ambt_18160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_18160 PF00672 HAMP domain ambt_18170 PF00850 Histone deacetylase domain ambt_18175 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ambt_18175 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ambt_18185 PF00873 AcrB/AcrD/AcrF family ambt_18190 PF00529 HlyD membrane-fusion protein of T1SS ambt_18190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_18205 PF00893 Small Multidrug Resistance protein ambt_18210 PF01810 LysE type translocator ambt_18215 PF03466 LysR substrate binding domain ambt_18215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_18225 PF17158 Membrane-associated sensor, integral membrane domain ambt_18225 PF00990 Diguanylate cyclase, GGDEF domain ambt_18245 PF00924 Mechanosensitive ion channel ambt_18245 PF05552 Conserved TM helix ambt_18265 PF08402 TOBE domain ambt_18265 PF00005 ABC transporter ambt_18270 PF00528 Binding-protein-dependent transport system inner membrane component ambt_18285 PF08534 Redoxin ambt_18285 PF00462 Glutaredoxin ambt_18290 PF04445 Putative SAM-dependent methyltransferase ambt_18295 PF00270 DEAD/DEAH box helicase ambt_18295 PF00271 Helicase conserved C-terminal domain ambt_18295 PF17191 RecG wedge domain ambt_18300 PF00588 SpoU rRNA Methylase family ambt_18300 PF12105 SpoU, rRNA methylase, C-terminal ambt_18305 PF01042 Endoribonuclease L-PSP ambt_18310 PF02824 TGS domain ambt_18310 PF04607 Region found in RelA / SpoT proteins ambt_18310 PF13291 ACT domain ambt_18315 PF01192 RNA polymerase Rpb6 ambt_18320 PF00625 Guanylate kinase ambt_18330 PF00072 Response regulator receiver domain ambt_18330 PF00990 Diguanylate cyclase, GGDEF domain ambt_18335 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ambt_18335 PF03900 Porphobilinogen deaminase, C-terminal domain ambt_18345 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ambt_18350 PF07719 Tetratricopeptide repeat ambt_18350 PF07219 HemY protein N-terminus ambt_18355 PF01979 Amidohydrolase family ambt_18360 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ambt_18365 PF07687 Peptidase dimerisation domain ambt_18365 PF01546 Peptidase family M20/M25/M40 ambt_18370 PF00171 Aldehyde dehydrogenase family ambt_18375 PF00202 Aminotransferase class-III ambt_18380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_18380 PF03466 LysR substrate binding domain ambt_18385 PF00440 Bacterial regulatory proteins, tetR family ambt_18385 PF08362 YcdC-like protein, C-terminal region ambt_18390 PF04055 Radical SAM superfamily ambt_18395 PF04055 Radical SAM superfamily ambt_18410 PF01996 F420-0:Gamma-glutamyl ligase ambt_18410 PF00881 Nitroreductase family ambt_18420 PF00296 Luciferase-like monooxygenase ambt_18425 PF07715 TonB-dependent Receptor Plug Domain ambt_18425 PF00593 TonB dependent receptor ambt_18445 PF13667 ThiC-associated domain ambt_18445 PF01964 Radical SAM ThiC family ambt_18450 PF02581 Thiamine monophosphate synthase ambt_18455 PF00899 ThiF family ambt_18465 PF05690 Thiazole biosynthesis protein ThiG ambt_18470 PF06968 Biotin and Thiamin Synthesis associated domain ambt_18470 PF04055 Radical SAM superfamily ambt_18490 PF04317 YcjX-like family, DUF463 ambt_18495 PF02627 Carboxymuconolactone decarboxylase family ambt_18500 PF00753 Metallo-beta-lactamase superfamily ambt_18505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_18505 PF03466 LysR substrate binding domain ambt_18510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ambt_18510 PF02770 Acyl-CoA dehydrogenase, middle domain ambt_18510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ambt_18525 PF00005 ABC transporter ambt_18530 PF13533 Biotin-lipoyl like ambt_18535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ambt_18535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ambt_18540 PF00171 Aldehyde dehydrogenase family ambt_18545 PF03466 LysR substrate binding domain ambt_18545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_18550 PF00593 TonB dependent receptor ambt_18550 PF07715 TonB-dependent Receptor Plug Domain ambt_18555 PF00072 Response regulator receiver domain ambt_18555 PF01627 Hpt domain ambt_18555 PF00512 His Kinase A (phospho-acceptor) domain ambt_18555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_18555 PF00672 HAMP domain ambt_18555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ambt_18560 PF02652 L-lactate permease ambt_18575 PF01131 DNA topoisomerase ambt_18575 PF01751 Toprim domain ambt_18575 PF01396 Topoisomerase DNA binding C4 zinc finger ambt_18585 PF02028 BCCT, betaine/carnitine/choline family transporter ambt_18620 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ambt_18625 PF00990 Diguanylate cyclase, GGDEF domain ambt_18625 PF03707 Bacterial signalling protein N terminal repeat ambt_18625 PF00563 EAL domain ambt_18630 PF00580 UvrD/REP helicase N-terminal domain ambt_18630 PF13361 UvrD-like helicase C-terminal domain ambt_18635 PF04380 Membrane fusogenic activity ambt_18640 PF01040 UbiA prenyltransferase family ambt_18645 PF04345 Chorismate lyase ambt_18655 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ambt_18655 PF01694 Rhomboid family ambt_18660 PF00581 Rhodanese-like domain ambt_18665 PF08240 Alcohol dehydrogenase GroES-like domain ambt_18665 PF00107 Zinc-binding dehydrogenase ambt_18670 PF00155 Aminotransferase class I and II ambt_18675 PF03707 Bacterial signalling protein N terminal repeat ambt_18675 PF00990 Diguanylate cyclase, GGDEF domain ambt_18675 PF00563 EAL domain ambt_18690 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ambt_18700 PF01467 Cytidylyltransferase-like ambt_18705 PF06827 Zinc finger found in FPG and IleRS ambt_18705 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ambt_18705 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ambt_18715 PF00471 Ribosomal protein L33 ambt_18720 PF00830 Ribosomal L28 family ambt_18725 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ambt_18730 PF01467 Cytidylyltransferase-like ambt_18735 PF06082 Exopolysaccharide biosynthesis protein YbjH ambt_18755 PF04002 RadC-like JAB domain ambt_18760 PF02441 Flavoprotein ambt_18760 PF04127 DNA / pantothenate metabolism flavoprotein ambt_18765 PF00440 Bacterial regulatory proteins, tetR family ambt_18775 PF04389 Peptidase family M28 ambt_18775 PF02225 PA domain ambt_18805 PF01336 OB-fold nucleic acid binding domain ambt_18805 PF14579 Helix-hairpin-helix motif ambt_18805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ambt_18805 PF02811 PHP domain ambt_18805 PF07733 Bacterial DNA polymerase III alpha NTPase domain ambt_18845 PF03412 Peptidase C39 family ambt_18845 PF00005 ABC transporter ambt_18845 PF00664 ABC transporter transmembrane region ambt_18850 PF03466 LysR substrate binding domain ambt_18850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_18860 PF01050 Mannose-6-phosphate isomerase ambt_18860 PF00483 Nucleotidyl transferase ambt_18865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ambt_18865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ambt_18865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ambt_18870 PF00535 Glycosyl transferase family 2 ambt_18875 PF16363 GDP-mannose 4,6 dehydratase ambt_18880 PF04321 RmlD substrate binding domain ambt_18885 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ambt_18890 PF00483 Nucleotidyl transferase ambt_18970 PF00535 Glycosyl transferase family 2 ambt_19040 PF01196 Ribosomal protein L17 ambt_19045 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ambt_19045 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ambt_19045 PF01000 RNA polymerase Rpb3/RpoA insert domain ambt_19050 PF00163 Ribosomal protein S4/S9 N-terminal domain ambt_19050 PF01479 S4 domain ambt_19055 PF00411 Ribosomal protein S11 ambt_19060 PF00416 Ribosomal protein S13/S18 ambt_19065 PF00444 Ribosomal protein L36 ambt_19070 PF00344 SecY translocase ambt_19075 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ambt_19080 PF00327 Ribosomal protein L30p/L7e ambt_19085 PF03719 Ribosomal protein S5, C-terminal domain ambt_19085 PF00333 Ribosomal protein S5, N-terminal domain ambt_19090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ambt_19095 PF00347 Ribosomal protein L6 ambt_19100 PF00410 Ribosomal protein S8 ambt_19105 PF00253 Ribosomal protein S14p/S29e ambt_19110 PF00281 Ribosomal protein L5 ambt_19110 PF00673 ribosomal L5P family C-terminus ambt_19115 PF00467 KOW motif ambt_19115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ambt_19120 PF00238 Ribosomal protein L14p/L23e ambt_19125 PF00072 Response regulator receiver domain ambt_19125 PF09308 LuxQ, periplasmic ambt_19125 PF00512 His Kinase A (phospho-acceptor) domain ambt_19125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_19140 PF00588 SpoU rRNA Methylase family ambt_19140 PF08032 RNA 2'-O ribose methyltransferase substrate binding ambt_19145 PF00575 S1 RNA binding domain ambt_19145 PF17876 Cold shock domain ambt_19145 PF00773 RNB domain ambt_19145 PF08461 Ribonuclease R winged-helix domain ambt_19145 PF08206 Ribonuclease B OB domain ambt_19150 PF16655 PhoD-like phosphatase, N-terminal domain ambt_19150 PF09423 PhoD-like phosphatase ambt_19155 PF00593 TonB dependent receptor ambt_19155 PF07715 TonB-dependent Receptor Plug Domain ambt_19160 PF08238 Sel1 repeat ambt_19170 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ambt_19175 PF00175 Oxidoreductase NAD-binding domain ambt_19175 PF00970 Oxidoreductase FAD-binding domain ambt_19185 PF04389 Peptidase family M28 ambt_19205 PF01654 Cytochrome bd terminal oxidase subunit I ambt_19210 PF02322 Cytochrome bd terminal oxidase subunit II ambt_19215 PF00672 HAMP domain ambt_19215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_19220 PF01037 Lrp/AsnC ligand binding domain ambt_19220 PF13404 AsnC-type helix-turn-helix domain ambt_19225 PF00291 Pyridoxal-phosphate dependent enzyme ambt_19240 PF00313 'Cold-shock' DNA-binding domain ambt_19245 PF03109 ABC1 family ambt_19255 PF01209 ubiE/COQ5 methyltransferase family ambt_19265 PF01432 Peptidase family M3 ambt_19270 PF00072 Response regulator receiver domain ambt_19280 PF00512 His Kinase A (phospho-acceptor) domain ambt_19280 PF00497 Bacterial extracellular solute-binding proteins, family 3 ambt_19280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_19285 PF00072 Response regulator receiver domain ambt_19285 PF02954 Bacterial regulatory protein, Fis family ambt_19285 PF00158 Sigma-54 interaction domain ambt_19290 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_19290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ambt_19295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ambt_19295 PF00384 Molybdopterin oxidoreductase ambt_19295 PF01568 Molydopterin dinucleotide binding domain ambt_19300 PF14685 Tricorn protease PDZ domain ambt_19300 PF14684 Tricorn protease C1 domain ambt_19300 PF03572 Peptidase family S41 ambt_19300 PF07676 WD40-like Beta Propeller Repeat ambt_19320 PF00005 ABC transporter ambt_19320 PF03412 Peptidase C39 family ambt_19320 PF00664 ABC transporter transmembrane region ambt_19325 PF00072 Response regulator receiver domain ambt_19325 PF00196 Bacterial regulatory proteins, luxR family ambt_19340 PF00004 ATPase family associated with various cellular activities (AAA) ambt_19340 PF07724 AAA domain (Cdc48 subfamily) ambt_19345 PF00227 Proteasome subunit ambt_19350 PF05036 Sporulation related domain ambt_19355 PF18074 Primosomal protein N C-terminal domain ambt_19355 PF00270 DEAD/DEAH box helicase ambt_19355 PF00271 Helicase conserved C-terminal domain ambt_19355 PF17764 3′ DNA-binding domain (3′BD) ambt_19355 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ambt_19365 PF01197 Ribosomal protein L31 ambt_19375 PF03949 Malic enzyme, NAD binding domain ambt_19375 PF00390 Malic enzyme, N-terminal domain ambt_19380 PF01340 Met Apo-repressor, MetJ ambt_19385 PF02219 Methylenetetrahydrofolate reductase ambt_19390 PF03631 Virulence factor BrkB ambt_19405 PF00561 alpha/beta hydrolase fold ambt_19410 PF02580 D-Tyr-tRNA(Tyr) deacylase ambt_19415 PF09500 Putative thioesterase (yiiD_Cterm) ambt_19415 PF00583 Acetyltransferase (GNAT) family ambt_19420 PF04545 Sigma-70, region 4 ambt_19420 PF00140 Sigma-70 factor, region 1.2 ambt_19420 PF04542 Sigma-70 region 2 ambt_19425 PF00563 EAL domain ambt_19425 PF08668 HDOD domain ambt_19430 PF08668 HDOD domain ambt_19430 PF00563 EAL domain ambt_19435 PF18075 FtsX extracellular domain ambt_19440 PF00005 ABC transporter ambt_19445 PF02881 SRP54-type protein, helical bundle domain ambt_19445 PF00448 SRP54-type protein, GTPase domain ambt_19460 PF01914 MarC family integral membrane protein ambt_19470 PF00883 Cytosol aminopeptidase family, catalytic domain ambt_19470 PF12404 Peptidase ambt_19475 PF00883 Cytosol aminopeptidase family, catalytic domain ambt_19475 PF12404 Peptidase ambt_19480 PF17746 SfsA N-terminal OB domain ambt_19480 PF03749 Sugar fermentation stimulation protein RE domain ambt_19485 PF01258 Prokaryotic dksA/traR C4-type zinc finger ambt_19490 PF00749 tRNA synthetases class I (E and Q), catalytic domain ambt_19495 PF12627 Probable RNA and SrmB- binding site of polymerase A ambt_19495 PF12626 Polymerase A arginine-rich C-terminus ambt_19495 PF01743 Poly A polymerase head domain ambt_19500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ambt_19505 PF02548 Ketopantoate hydroxymethyltransferase ambt_19510 PF02569 Pantoate-beta-alanine ligase ambt_19515 PF00282 Pyridoxal-dependent decarboxylase conserved domain ambt_19530 PF01061 ABC-2 type transporter ambt_19535 PF00005 ABC transporter ambt_19540 PF00486 Transcriptional regulatory protein, C terminal ambt_19540 PF00072 Response regulator receiver domain ambt_19545 PF00672 HAMP domain ambt_19545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_19545 PF00512 His Kinase A (phospho-acceptor) domain ambt_19550 PF07715 TonB-dependent Receptor Plug Domain ambt_19550 PF00593 TonB dependent receptor ambt_19555 PF18331 PKHD-type hydroxylase C-terminal domain ambt_19555 PF13640 2OG-Fe(II) oxygenase superfamily ambt_19570 PF00571 CBS domain ambt_19570 PF01595 Cyclin M transmembrane N-terminal domain ambt_19575 PF03773 Predicted permease ambt_19580 PF13722 5TM C-terminal transporter carbon starvation CstA ambt_19580 PF02554 Carbon starvation protein CstA ambt_19595 PF00474 Sodium:solute symporter family ambt_19610 PF00009 Elongation factor Tu GTP binding domain ambt_19610 PF03144 Elongation factor Tu domain 2 ambt_19610 PF03143 Elongation factor Tu C-terminal domain ambt_19615 PF03144 Elongation factor Tu domain 2 ambt_19615 PF14492 Elongation Factor G, domain II ambt_19615 PF00679 Elongation factor G C-terminus ambt_19615 PF00009 Elongation factor Tu GTP binding domain ambt_19615 PF03764 Elongation factor G, domain IV ambt_19620 PF00177 Ribosomal protein S7p/S5e ambt_19625 PF00164 Ribosomal protein S12/S23 ambt_19630 PF04983 RNA polymerase Rpb1, domain 3 ambt_19630 PF04998 RNA polymerase Rpb1, domain 5 ambt_19630 PF05000 RNA polymerase Rpb1, domain 4 ambt_19630 PF00623 RNA polymerase Rpb1, domain 2 ambt_19630 PF04997 RNA polymerase Rpb1, domain 1 ambt_19635 PF10385 RNA polymerase beta subunit external 1 domain ambt_19635 PF04563 RNA polymerase beta subunit ambt_19635 PF04561 RNA polymerase Rpb2, domain 2 ambt_19635 PF04560 RNA polymerase Rpb2, domain 7 ambt_19635 PF04565 RNA polymerase Rpb2, domain 3 ambt_19635 PF00562 RNA polymerase Rpb2, domain 6 ambt_19640 PF16320 Ribosomal protein L7/L12 dimerisation domain ambt_19640 PF00542 Ribosomal protein L7/L12 C-terminal domain ambt_19645 PF00466 Ribosomal protein L10 ambt_19650 PF00687 Ribosomal protein L1p/L10e family ambt_19655 PF00298 Ribosomal protein L11, RNA binding domain ambt_19655 PF03946 Ribosomal protein L11, N-terminal domain ambt_19665 PF00467 KOW motif ambt_19665 PF02357 Transcription termination factor nusG ambt_19670 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ambt_19675 PF00005 ABC transporter ambt_19675 PF00664 ABC transporter transmembrane region ambt_19680 PF03737 Aldolase/RraA ambt_19690 PF01431 Peptidase family M13 ambt_19690 PF05649 Peptidase family M13 ambt_19700 PF00270 DEAD/DEAH box helicase ambt_19700 PF03880 DbpA RNA binding domain ambt_19700 PF00271 Helicase conserved C-terminal domain ambt_19705 PF01979 Amidohydrolase family ambt_19715 PF08212 Lipocalin-like domain ambt_19720 PF00248 Aldo/keto reductase family ambt_19725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ambt_19735 PF01227 GTP cyclohydrolase I ambt_19740 PF04371 Porphyromonas-type peptidyl-arginine deiminase ambt_19745 PF00795 Carbon-nitrogen hydrolase ambt_19755 PF00271 Helicase conserved C-terminal domain ambt_19755 PF08494 DEAD/H associated ambt_19755 PF00270 DEAD/DEAH box helicase ambt_19775 PF00294 pfkB family carbohydrate kinase ambt_19780 PF00480 ROK family ambt_19785 PF02310 B12 binding domain ambt_19785 PF02607 B12 binding domain ambt_19785 PF02965 Vitamin B12 dependent methionine synthase, activation domain ambt_19785 PF00809 Pterin binding enzyme ambt_19785 PF02574 Homocysteine S-methyltransferase ambt_19790 PF00043 Glutathione S-transferase, C-terminal domain ambt_19790 PF02798 Glutathione S-transferase, N-terminal domain ambt_19805 PF00561 alpha/beta hydrolase fold ambt_19820 PF00171 Aldehyde dehydrogenase family ambt_19825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ambt_19825 PF00205 Thiamine pyrophosphate enzyme, central domain ambt_19825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ambt_19835 PF00762 Ferrochelatase ambt_19840 PF03806 AbgT putative transporter family ambt_19845 PF01145 SPFH domain / Band 7 family ambt_19850 PF12221 Bacterial membrane protein N terminal ambt_19850 PF01145 SPFH domain / Band 7 family ambt_19855 PF16360 GTP-binding GTPase Middle Region ambt_19855 PF13167 GTP-binding GTPase N-terminal ambt_19855 PF01926 50S ribosome-binding GTPase ambt_19860 PF17209 Hfq protein ambt_19870 PF01119 DNA mismatch repair protein, C-terminal domain ambt_19870 PF08676 MutL C terminal dimerisation domain ambt_19875 PF01520 N-acetylmuramoyl-L-alanine amidase ambt_19880 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ambt_19885 PF03853 YjeF-related protein N-terminus ambt_19885 PF01256 Carbohydrate kinase ambt_19890 PF08331 Domain of unknown function (DUF1730) ambt_19900 PF01208 Uroporphyrinogen decarboxylase (URO-D) ambt_19905 PF00293 NUDIX domain ambt_19905 PF09297 NADH pyrophosphatase zinc ribbon domain ambt_19910 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ambt_19915 PF01475 Ferric uptake regulator family ambt_19925 PF01894 Uncharacterised protein family UPF0047 ambt_19930 PF05736 OprF membrane domain ambt_19930 PF00691 OmpA family ambt_19935 PF03796 DnaB-like helicase C terminal domain ambt_19935 PF00772 DnaB-like helicase N terminal domain ambt_19960 PF03475 3-alpha domain ambt_19960 PF03473 MOSC domain ambt_19970 PF00873 AcrB/AcrD/AcrF family ambt_19975 PF01281 Ribosomal protein L9, N-terminal domain ambt_19975 PF03948 Ribosomal protein L9, C-terminal domain ambt_19980 PF01084 Ribosomal protein S18 ambt_19985 PF01250 Ribosomal protein S6 ambt_19990 PF00512 His Kinase A (phospho-acceptor) domain ambt_19990 PF18698 Histidine kinase sensor domain ambt_19990 PF00989 PAS fold ambt_19990 PF00672 HAMP domain ambt_19990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_20000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_20000 PF08447 PAS fold ambt_20005 PF00512 His Kinase A (phospho-acceptor) domain ambt_20005 PF00497 Bacterial extracellular solute-binding proteins, family 3 ambt_20005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_20010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ambt_20010 PF00672 HAMP domain ambt_20010 PF17200 Single Cache domain 2 ambt_20015 PF00356 Bacterial regulatory proteins, lacI family ambt_20025 PF00232 Glycosyl hydrolase family 1 ambt_20040 PF00005 ABC transporter ambt_20045 PF01032 FecCD transport family ambt_20050 PF01497 Periplasmic binding protein ambt_20060 PF07715 TonB-dependent Receptor Plug Domain ambt_20060 PF00593 TonB dependent receptor ambt_20065 PF07690 Major Facilitator Superfamily ambt_20070 PF00933 Glycosyl hydrolase family 3 N terminal domain ambt_20070 PF14310 Fibronectin type III-like domain ambt_20070 PF01915 Glycosyl hydrolase family 3 C-terminal domain ambt_20085 PF03601 Conserved hypothetical protein 698 ambt_20090 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ambt_20095 PF00248 Aldo/keto reductase family ambt_20120 PF00474 Sodium:solute symporter family ambt_20125 PF16916 Dimerisation domain of Zinc Transporter ambt_20125 PF01545 Cation efflux family ambt_20145 PF00722 Glycosyl hydrolases family 16 ambt_20160 PF00593 TonB dependent receptor ambt_20160 PF07715 TonB-dependent Receptor Plug Domain ambt_20165 PF00005 ABC transporter ambt_20165 PF00664 ABC transporter transmembrane region ambt_20170 PF00664 ABC transporter transmembrane region ambt_20170 PF00005 ABC transporter ambt_20175 PF08173 Membrane bound YbgT-like protein ambt_20180 PF02322 Cytochrome bd terminal oxidase subunit II ambt_20185 PF01654 Cytochrome bd terminal oxidase subunit I ambt_20200 PF02954 Bacterial regulatory protein, Fis family ambt_20200 PF00072 Response regulator receiver domain ambt_20200 PF00158 Sigma-54 interaction domain ambt_20230 PF08207 Elongation factor P (EF-P) KOW-like domain ambt_20230 PF01132 Elongation factor P (EF-P) OB domain ambt_20230 PF09285 Elongation factor P, C-terminal ambt_20270 PF13474 SnoaL-like domain ambt_20315 PF05532 CsbD-like ambt_20330 PF08281 Sigma-70, region 4 ambt_20330 PF04542 Sigma-70 region 2 ambt_20335 PF00082 Subtilase family ambt_20335 PF05922 Peptidase inhibitor I9 ambt_20355 PF00472 RF-1 domain ambt_20360 PF08386 TAP-like protein ambt_20360 PF00561 alpha/beta hydrolase fold ambt_20385 PF01292 Prokaryotic cytochrome b561 ambt_20390 PF04264 YceI-like domain ambt_20395 PF07992 Pyridine nucleotide-disulphide oxidoreductase ambt_20400 PF00593 TonB dependent receptor ambt_20400 PF07715 TonB-dependent Receptor Plug Domain ambt_20410 PF01048 Phosphorylase superfamily ambt_20415 PF03466 LysR substrate binding domain ambt_20415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_20420 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ambt_20430 PF16884 N-terminal domain of oxidoreductase ambt_20430 PF00107 Zinc-binding dehydrogenase ambt_20435 PF00990 Diguanylate cyclase, GGDEF domain ambt_20435 PF01590 GAF domain ambt_20435 PF00563 EAL domain ambt_20435 PF00360 Phytochrome region ambt_20440 PF00512 His Kinase A (phospho-acceptor) domain ambt_20440 PF00072 Response regulator receiver domain ambt_20440 PF09308 LuxQ, periplasmic ambt_20440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_20455 PF13340 Putative transposase of IS4/5 family (DUF4096) ambt_20460 PF00296 Luciferase-like monooxygenase ambt_20470 PF00005 ABC transporter ambt_20490 PF07683 Cobalamin synthesis protein cobW C-terminal domain ambt_20490 PF02492 CobW/HypB/UreG, nucleotide-binding domain ambt_20505 PF07715 TonB-dependent Receptor Plug Domain ambt_20505 PF00593 TonB dependent receptor ambt_20535 PF01380 SIS domain ambt_20545 PF00132 Bacterial transferase hexapeptide (six repeats) ambt_20545 PF14602 Hexapeptide repeat of succinyl-transferase ambt_20545 PF12804 MobA-like NTP transferase domain ambt_20555 PF00892 EamA-like transporter family ambt_20560 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ambt_20560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ambt_20570 PF00144 Beta-lactamase ambt_20575 PF17810 Arginine decarboxylase helical bundle domain ambt_20575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ambt_20575 PF17944 Arginine decarboxylase C-terminal helical extension ambt_20585 PF02233 NAD(P) transhydrogenase beta subunit ambt_20590 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ambt_20595 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ambt_20595 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ambt_20620 PF02492 CobW/HypB/UreG, nucleotide-binding domain ambt_20625 PF01730 UreF ambt_20630 PF02814 UreE urease accessory protein, N-terminal domain ambt_20630 PF05194 UreE urease accessory protein, C-terminal domain ambt_20635 PF00449 Urease alpha-subunit, N-terminal domain ambt_20635 PF01979 Amidohydrolase family ambt_20640 PF00699 Urease beta subunit ambt_20645 PF00547 Urease, gamma subunit ambt_20650 PF01774 UreD urease accessory protein ambt_20655 PF00005 ABC transporter ambt_20660 PF00005 ABC transporter ambt_20660 PF12399 Branched-chain amino acid ATP-binding cassette transporter ambt_20670 PF02653 Branched-chain amino acid transport system / permease component ambt_20685 PF00072 Response regulator receiver domain ambt_20685 PF01627 Hpt domain ambt_20685 PF00512 His Kinase A (phospho-acceptor) domain ambt_20685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_20685 PF00672 HAMP domain ambt_20685 PF17149 Periplasmic sensor domain found in signal transduction proteins ambt_20690 PF00486 Transcriptional regulatory protein, C terminal ambt_20690 PF00072 Response regulator receiver domain ambt_20695 PF02492 CobW/HypB/UreG, nucleotide-binding domain ambt_20695 PF07683 Cobalamin synthesis protein cobW C-terminal domain ambt_20705 PF03707 Bacterial signalling protein N terminal repeat ambt_20705 PF00990 Diguanylate cyclase, GGDEF domain ambt_20705 PF00563 EAL domain ambt_20780 PF04002 RadC-like JAB domain ambt_20875 PF01026 TatD related DNase ambt_20885 PF03616 Sodium/glutamate symporter ambt_20900 PF02321 Outer membrane efflux protein ambt_20905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ambt_20910 PF00873 AcrB/AcrD/AcrF family ambt_20990 PF02195 ParB-like nuclease domain ambt_20990 PF17762 HTH domain found in ParB protein ambt_21000 PF05973 Phage derived protein Gp49-like (DUF891) ambt_21005 PF00589 Phage integrase family ambt_21005 PF13356 Arm DNA-binding domain ambt_21010 PF00118 TCP-1/cpn60 chaperonin family ambt_21015 PF00166 Chaperonin 10 Kd subunit ambt_21025 PF11412 Disulphide bond corrector protein DsbC ambt_21025 PF02683 Cytochrome C biogenesis protein transmembrane region ambt_21030 PF01551 Peptidase family M23 ambt_21035 PF01220 Dehydroquinase class II ambt_21040 PF00364 Biotin-requiring enzyme ambt_21045 PF00289 Biotin carboxylase, N-terminal domain ambt_21045 PF02785 Biotin carboxylase C-terminal domain ambt_21045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ambt_21065 PF02811 PHP domain ambt_21065 PF14579 Helix-hairpin-helix motif ambt_21065 PF11490 DNA polymerase III polC-type N-terminus II ambt_21065 PF07733 Bacterial DNA polymerase III alpha NTPase domain ambt_21065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ambt_21065 PF00929 Exonuclease ambt_21080 PF01355 High potential iron-sulfur protein ambt_21085 PF01425 Amidase ambt_21110 PF00005 ABC transporter ambt_21120 PF01292 Prokaryotic cytochrome b561 ambt_21130 PF00248 Aldo/keto reductase family ambt_21135 PF00106 short chain dehydrogenase ambt_21140 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ambt_21145 PF03466 LysR substrate binding domain ambt_21145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_21150 PF01695 IstB-like ATP binding protein ambt_21155 PF00665 Integrase core domain ambt_21175 PF01207 Dihydrouridine synthase (Dus) ambt_21180 PF02954 Bacterial regulatory protein, Fis family ambt_21185 PF01808 AICARFT/IMPCHase bienzyme ambt_21185 PF02142 MGS-like domain ambt_21195 PF02844 Phosphoribosylglycinamide synthetase, N domain ambt_21195 PF02843 Phosphoribosylglycinamide synthetase, C domain ambt_21195 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ambt_21205 PF00027 Cyclic nucleotide-binding domain ambt_21205 PF00520 Ion transport protein ambt_21210 PF00485 Phosphoribulokinase / Uridine kinase family ambt_21220 PF01527 Transposase ambt_21225 PF00873 AcrB/AcrD/AcrF family ambt_21230 PF13533 Biotin-lipoyl like ambt_21235 PF00440 Bacterial regulatory proteins, tetR family ambt_21245 PF00512 His Kinase A (phospho-acceptor) domain ambt_21245 PF16750 Sensor domain of 2-component histidine kinase ambt_21245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_21245 PF00672 HAMP domain ambt_21250 PF00072 Response regulator receiver domain ambt_21250 PF00486 Transcriptional regulatory protein, C terminal ambt_21255 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ambt_21255 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ambt_21260 PF00501 AMP-binding enzyme ambt_21260 PF13193 AMP-binding enzyme C-terminal domain ambt_21265 PF01609 Transposase DDE domain ambt_21265 PF13808 DDE_Tnp_1-associated ambt_21270 PF00664 ABC transporter transmembrane region ambt_21270 PF00005 ABC transporter ambt_21285 PF13808 DDE_Tnp_1-associated ambt_21285 PF01609 Transposase DDE domain ambt_21295 PF13737 Transposase DDE domain ambt_21345 PF00486 Transcriptional regulatory protein, C terminal ambt_21345 PF00072 Response regulator receiver domain ambt_21350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ambt_21350 PF00512 His Kinase A (phospho-acceptor) domain ambt_21350 PF00672 HAMP domain ambt_21365 PF01430 Hsp33 protein ambt_21370 PF01479 S4 domain ambt_21375 PF11356 Type II secretion system protein C ambt_21380 PF03958 Bacterial type II/III secretion system short domain ambt_21380 PF00263 Bacterial type II and III secretion system protein ambt_21385 PF00437 Type II/IV secretion system protein ambt_21390 PF00482 Type II secretion system (T2SS), protein F ambt_21395 PF08334 Type II secretion system (T2SS), protein G ambt_21395 PF07963 Prokaryotic N-terminal methylation motif ambt_21400 PF12019 Type II transport protein GspH ambt_21405 PF02501 Type II secretion system (T2SS), protein I ambt_21405 PF07963 Prokaryotic N-terminal methylation motif ambt_21410 PF07963 Prokaryotic N-terminal methylation motif ambt_21410 PF11612 Type II secretion system (T2SS), protein J ambt_21415 PF03934 Type II secretion system (T2SS), protein K ambt_21420 PF05134 Type II secretion system (T2SS), protein L ambt_21420 PF12693 GspL periplasmic domain ambt_21425 PF04612 Type II secretion system (T2SS), protein M ambt_21435 PF12706 Beta-lactamase superfamily domain ambt_21440 PF00171 Aldehyde dehydrogenase family ambt_21445 PF01931 Protein of unknown function DUF84 ambt_21450 PF13419 Haloacid dehalogenase-like hydrolase ambt_21455 PF00293 NUDIX domain ambt_21460 PF00459 Inositol monophosphatase family ambt_21470 PF00535 Glycosyl transferase family 2 ambt_21475 PF04349 Periplasmic glucan biosynthesis protein, MdoG ambt_21490 PF06794 Uncharacterised protein family (UPF0270) ambt_21495 PF00561 alpha/beta hydrolase fold ambt_21505 PF12848 ABC transporter ambt_21505 PF00005 ABC transporter ambt_21510 PF09526 Probable metal-binding protein (DUF2387) ambt_21520 PF04102 SlyX ambt_21530 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ambt_21530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ambt_21540 PF03449 Transcription elongation factor, N-terminal ambt_21540 PF01272 Transcription elongation factor, GreA/GreB, C-term ambt_21570 PF01695 IstB-like ATP binding protein ambt_21575 PF00665 Integrase core domain ambt_21595 PF01272 Transcription elongation factor, GreA/GreB, C-term ambt_21595 PF03449 Transcription elongation factor, N-terminal ambt_21620 PF03449 Transcription elongation factor, N-terminal ambt_21620 PF01272 Transcription elongation factor, GreA/GreB, C-term ambt_21625 PF17674 HHH domain ambt_21625 PF00575 S1 RNA binding domain ambt_21625 PF16921 Tex protein YqgF-like domain ambt_21625 PF09371 Tex-like protein N-terminal domain ambt_21640 PF00561 alpha/beta hydrolase fold ambt_21645 PF00156 Phosphoribosyl transferase domain ambt_21655 PF01521 Iron-sulphur cluster biosynthesis ambt_21655 PF01106 NifU-like domain ambt_21665 PF01177 Asp/Glu/Hydantoin racemase ambt_21675 PF13649 Methyltransferase domain ambt_21680 PF06445 GyrI-like small molecule binding domain ambt_21685 PF01554 MatE ambt_21700 PF02630 SCO1/SenC ambt_21705 PF01040 UbiA prenyltransferase family ambt_21710 PF02628 Cytochrome oxidase assembly protein ambt_21730 PF00510 Cytochrome c oxidase subunit III ambt_21735 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ambt_21740 PF00115 Cytochrome C and Quinol oxidase polypeptide I ambt_21745 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ambt_21745 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ambt_21750 PF00717 Peptidase S24-like ambt_21750 PF01726 LexA DNA binding domain ambt_21755 PF07715 TonB-dependent Receptor Plug Domain ambt_21755 PF00593 TonB dependent receptor ambt_21765 PF01553 Acyltransferase ambt_21770 PF00585 C-terminal regulatory domain of Threonine dehydratase ambt_21770 PF00291 Pyridoxal-phosphate dependent enzyme ambt_21775 PF00920 Dehydratase family ambt_21780 PF01063 Amino-transferase class IV ambt_21785 PF03458 UPF0126 domain ambt_21790 PF01078 Magnesium chelatase, subunit ChlI ambt_21790 PF13335 Magnesium chelatase, subunit ChlI C-terminal ambt_21795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ambt_21795 PF03466 LysR substrate binding domain ambt_21800 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ambt_21800 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ambt_21805 PF07690 Major Facilitator Superfamily ambt_21810 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ambt_21815 PF07244 Surface antigen variable number repeat ambt_21815 PF17243 POTRA domain TamA domain 1 ambt_21815 PF01103 Surface antigen ambt_21820 PF04357 TamB, inner membrane protein subunit of TAM complex ambt_21845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ambt_21845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ambt_21855 PF01472 PUA domain ambt_21855 PF00696 Amino acid kinase family ambt_21875 PF03109 ABC1 family ambt_21885 PF04116 Fatty acid hydroxylase superfamily ambt_21905 PF01979 Amidohydrolase family ambt_21925 PF06724 Domain of Unknown Function (DUF1206) ambt_21930 PF01206 Sulfurtransferase TusA ambt_21935 PF00156 Phosphoribosyl transferase domain ambt_21940 PF03725 3' exoribonuclease family, domain 2 ambt_21940 PF01138 3' exoribonuclease family, domain 1 ambt_21945 PF03755 YicC-like family, N-terminal region ambt_21945 PF08340 Domain of unknown function (DUF1732) ambt_22000 PF02384 N-6 DNA Methylase ambt_22000 PF12161 HsdM N-terminal domain ambt_22005 PF08463 EcoEI R protein C-terminal ambt_22005 PF00271 Helicase conserved C-terminal domain ambt_22005 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) ambt_22005 PF04851 Type III restriction enzyme, res subunit ambt_22070 PF04820 Tryptophan halogenase ambt_22090 PF00232 Glycosyl hydrolase family 1 ambt_22100 PF00356 Bacterial regulatory proteins, lacI family ambt_22110 PF00691 OmpA family ambt_22110 PF05736 OprF membrane domain ambt_22115 PF01966 HD domain ambt_22130 PF02798 Glutathione S-transferase, N-terminal domain ambt_22130 PF00043 Glutathione S-transferase, C-terminal domain ambt_22145 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ambt_22145 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ambt_22150 PF02874 ATP synthase alpha/beta family, beta-barrel domain ambt_22150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ambt_22155 PF00231 ATP synthase ambt_22160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ambt_22160 PF02874 ATP synthase alpha/beta family, beta-barrel domain ambt_22160 PF00306 ATP synthase alpha/beta chain, C terminal domain ambt_22165 PF00213 ATP synthase delta (OSCP) subunit ambt_22170 PF00430 ATP synthase B/B' CF(0) ambt_22175 PF00137 ATP synthase subunit C ambt_22180 PF00119 ATP synthase A chain ambt_22190 PF17762 HTH domain found in ParB protein ambt_22190 PF02195 ParB-like nuclease domain ambt_22195 PF13614 AAA domain ambt_22200 PF02527 rRNA small subunit methyltransferase G ambt_22205 PF01134 Glucose inhibited division protein A ambt_22205 PF13932 GidA associated domain ambt_22220 PF00258 Flavodoxin ambt_22225 PF10396 GTP-binding protein TrmE N-terminus ambt_22225 PF12631 MnmE helical domain ambt_22225 PF01926 50S ribosome-binding GTPase ambt_22230 PF04461 Protein of unknown function (DUF520) ambt_22235 PF14849 YidC periplasmic domain ambt_22235 PF02096 60Kd inner membrane protein ambt_22240 PF01809 Putative membrane protein insertion efficiency factor ambt_22245 PF00825 Ribonuclease P