ambt_14230 457d09653e8ba907f158c1f135d4078a 373 Gene3D G3DSA:2.30.40.10 8 370 9.0E-110 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_14230 457d09653e8ba907f158c1f135d4078a 373 Pfam PF01979 Amidohydrolase family 46 367 1.7E-21 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ambt_14230 457d09653e8ba907f158c1f135d4078a 373 SUPERFAMILY SSF51556 50 344 7.49E-93 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_14230 457d09653e8ba907f158c1f135d4078a 373 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 4 370 8.5E-85 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 ambt_14230 457d09653e8ba907f158c1f135d4078a 373 SUPERFAMILY SSF51338 3 372 5.06E-6 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_14230 457d09653e8ba907f158c1f135d4078a 373 PIRSF PIRSF038994 1 373 9.2E-103 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 ambt_14230 457d09653e8ba907f158c1f135d4078a 373 Gene3D G3DSA:3.20.20.140 51 338 9.0E-110 T 13-10-2018 ambt_21800 5e2e7bcc3666297908198d94d8213cab 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 3.0E-25 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ambt_21800 5e2e7bcc3666297908198d94d8213cab 492 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 4.6E-20 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ambt_21800 5e2e7bcc3666297908198d94d8213cab 492 Gene3D G3DSA:3.40.50.720 1 208 1.2E-82 T 13-10-2018 ambt_21800 5e2e7bcc3666297908198d94d8213cab 492 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.1E-56 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ambt_21800 5e2e7bcc3666297908198d94d8213cab 492 Gene3D G3DSA:1.10.1040.10 209 492 1.0E-111 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ambt_21800 5e2e7bcc3666297908198d94d8213cab 492 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.606 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ambt_21800 5e2e7bcc3666297908198d94d8213cab 492 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 1.5E-114 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ambt_21800 5e2e7bcc3666297908198d94d8213cab 492 SUPERFAMILY SSF51735 28 209 1.85E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_21800 5e2e7bcc3666297908198d94d8213cab 492 SUPERFAMILY SSF48179 348 487 9.35E-43 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_21800 5e2e7bcc3666297908198d94d8213cab 492 SUPERFAMILY SSF48179 210 370 6.63E-37 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_09450 fb1348ab43eaa734ae59de0c161e86ab 545 Gene3D G3DSA:2.60.200.40 366 529 1.8E-23 T 13-10-2018 ambt_09450 fb1348ab43eaa734ae59de0c161e86ab 545 SMART SM00046 240 363 4.2E-8 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ambt_09450 fb1348ab43eaa734ae59de0c161e86ab 545 Pfam PF00782 Dual specificity phosphatase, catalytic domain 98 227 1.1E-19 T 13-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 ambt_09450 fb1348ab43eaa734ae59de0c161e86ab 545 Gene3D G3DSA:3.90.190.10 78 232 1.6E-28 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like ambt_09450 fb1348ab43eaa734ae59de0c161e86ab 545 SUPERFAMILY SSF52799 84 228 2.18E-31 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like ambt_09450 fb1348ab43eaa734ae59de0c161e86ab 545 SUPERFAMILY SSF111331 238 536 2.35E-53 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ambt_09450 fb1348ab43eaa734ae59de0c161e86ab 545 Gene3D G3DSA:3.40.50.10330 234 365 2.0E-30 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ambt_09450 fb1348ab43eaa734ae59de0c161e86ab 545 SMART SM00195 90 229 6.2E-22 T 13-10-2018 IPR020422 Dual specificity protein phosphatase domain GO:0006470|GO:0008138 ambt_09450 fb1348ab43eaa734ae59de0c161e86ab 545 Pfam PF00781 Diacylglycerol kinase catalytic domain 240 365 3.1E-25 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ambt_10590 a5ede36da417559754a846d7c967ec6e 292 Gene3D G3DSA:3.90.550.10 2 217 4.4E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_10590 a5ede36da417559754a846d7c967ec6e 292 Pfam PF00535 Glycosyl transferase family 2 8 132 6.8E-28 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_10590 a5ede36da417559754a846d7c967ec6e 292 SUPERFAMILY SSF53448 4 224 1.5E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 Pfam PF00384 Molybdopterin oxidoreductase 86 499 3.7E-74 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 Gene3D G3DSA:2.20.25.90 15 72 4.0E-14 T 13-10-2018 ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 SUPERFAMILY SSF50692 574 720 2.49E-34 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 Gene3D G3DSA:3.40.228.10 150 351 7.3E-167 T 13-10-2018 ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 SMART SM00926 15 73 6.3E-12 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 Gene3D G3DSA:3.40.50.740 86 554 7.3E-167 T 13-10-2018 ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 Pfam PF04324 BFD-like [2Fe-2S] binding domain 868 917 5.7E-10 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 Pfam PF01568 Molydopterin dinucleotide binding domain 601 713 7.3E-24 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 SUPERFAMILY SSF53706 16 603 2.62E-174 T 13-10-2018 ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 Gene3D G3DSA:1.10.10.1100 868 921 1.2E-10 T 13-10-2018 ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 PIRSF PIRSF036643 2 743 1.2E-141 T 13-10-2018 ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 Gene3D G3DSA:2.40.40.20 598 721 6.9E-32 T 13-10-2018 ambt_15170 8f30df316963864202d7ccdd7802d4e5 929 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 18 70 4.9E-15 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_04000 aaa2b132d7942a128510ebafc37caf1a 451 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 14 356 2.0E-129 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ambt_04000 aaa2b132d7942a128510ebafc37caf1a 451 Pfam PF13742 OB-fold nucleic acid binding domain 13 106 9.1E-28 T 13-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 ambt_04000 aaa2b132d7942a128510ebafc37caf1a 451 Pfam PF02601 Exonuclease VII, large subunit 129 442 2.9E-96 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 ambt_04000 aaa2b132d7942a128510ebafc37caf1a 451 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 10 445 28.335 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ambt_05035 8206c87c99475d83dcc5d684288d5049 234 Gene3D G3DSA:2.60.120.10 4 143 1.1E-28 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_05035 8206c87c99475d83dcc5d684288d5049 234 Gene3D G3DSA:1.10.10.10 144 229 1.3E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_05035 8206c87c99475d83dcc5d684288d5049 234 SMART SM00100 17 138 3.4E-18 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain ambt_05035 8206c87c99475d83dcc5d684288d5049 234 Pfam PF00027 Cyclic nucleotide-binding domain 36 122 5.7E-18 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain ambt_05035 8206c87c99475d83dcc5d684288d5049 234 SUPERFAMILY SSF46785 154 229 2.65E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_05035 8206c87c99475d83dcc5d684288d5049 234 Pfam PF13545 Crp-like helix-turn-helix domain 157 226 1.6E-13 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ambt_05035 8206c87c99475d83dcc5d684288d5049 234 SUPERFAMILY SSF51206 12 145 1.7E-31 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like ambt_05035 8206c87c99475d83dcc5d684288d5049 234 SMART SM00419 174 222 1.9E-7 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ambt_07970 7a2a3b30a6449a9ba9dd4f710dd6684c 325 SUPERFAMILY SSF52518 1 205 1.59E-69 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_07970 7a2a3b30a6449a9ba9dd4f710dd6684c 325 Gene3D G3DSA:3.40.50.920 194 324 9.1E-50 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ambt_07970 7a2a3b30a6449a9ba9dd4f710dd6684c 325 Pfam PF02780 Transketolase, C-terminal domain 195 312 4.3E-34 T 13-10-2018 IPR033248 Transketolase, C-terminal domain ambt_07970 7a2a3b30a6449a9ba9dd4f710dd6684c 325 SMART SM00861 4 180 2.9E-64 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ambt_07970 7a2a3b30a6449a9ba9dd4f710dd6684c 325 SUPERFAMILY SSF52922 189 324 5.1E-38 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ambt_07970 7a2a3b30a6449a9ba9dd4f710dd6684c 325 Gene3D G3DSA:3.40.50.970 1 193 1.0E-86 T 13-10-2018 ambt_07970 7a2a3b30a6449a9ba9dd4f710dd6684c 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 179 3.1E-50 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ambt_17380 04a2882933ccf13f995595552dac4617 338 PIRSF PIRSF005096 1 338 9.1E-109 T 13-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 ambt_17380 04a2882933ccf13f995595552dac4617 338 Gene3D G3DSA:2.70.98.10 7 337 1.9E-109 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 ambt_17380 04a2882933ccf13f995595552dac4617 338 Pfam PF01263 Aldose 1-epimerase 18 334 8.9E-76 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 ambt_17380 04a2882933ccf13f995595552dac4617 338 SUPERFAMILY SSF74650 7 335 1.38E-100 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ambt_09820 ad0283aa5a5fdd3d758712eb0ec2d237 414 Pfam PF01566 Natural resistance-associated macrophage protein 27 383 4.9E-69 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 Gene3D G3DSA:1.10.220.120 1 64 1.1E-28 T 13-10-2018 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 PRINTS PR00046 Major sigma-70 factor signature 422 430 6.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 PRINTS PR00046 Major sigma-70 factor signature 567 582 6.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 PRINTS PR00046 Major sigma-70 factor signature 546 558 6.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 PRINTS PR00046 Major sigma-70 factor signature 582 593 6.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 PRINTS PR00046 Major sigma-70 factor signature 398 411 6.1E-31 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 SUPERFAMILY SSF88946 113 441 2.47E-101 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 Pfam PF04545 Sigma-70, region 4 542 595 1.0E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 Pfam PF00140 Sigma-70 factor, region 1.2 96 126 4.3E-13 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 Pfam PF04539 Sigma-70 region 3 453 528 2.2E-28 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 607 46.216 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 370 606 6.9E-121 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 398 411 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 SUPERFAMILY SSF88659 447 520 5.01E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 1.5E-29 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 Pfam PF04546 Sigma-70, non-essential region 137 343 1.2E-66 T 13-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 Gene3D G3DSA:1.10.10.10 524 608 8.7E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 SUPERFAMILY SSF88659 504 606 1.37E-25 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 Gene3D G3DSA:1.10.601.10 111 443 8.2E-139 T 13-10-2018 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 370 595 2.2E-37 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 Gene3D G3DSA:1.10.10.10 447 523 4.8E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 567 593 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15015 6dd6e15aba6c0c505aa34f91f412e9e2 608 Pfam PF04542 Sigma-70 region 2 374 443 1.7E-21 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_11895 194938ba43a9e28c54d2c172d9343198 204 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 43 198 1.9E-25 T 13-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component ambt_11895 194938ba43a9e28c54d2c172d9343198 204 SUPERFAMILY SSF159594 41 201 1.86E-18 T 13-10-2018 ambt_11660 7d60aa917531e46d200f3937684573ac 465 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 257 33.115 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ambt_11660 7d60aa917531e46d200f3937684573ac 465 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 258 465 30.478 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ambt_11660 7d60aa917531e46d200f3937684573ac 465 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 260 459 9.7E-50 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ambt_11660 7d60aa917531e46d200f3937684573ac 465 SUPERFAMILY SSF51366 1 256 3.96E-78 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ambt_11660 7d60aa917531e46d200f3937684573ac 465 SUPERFAMILY SSF51366 260 463 2.35E-52 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ambt_11660 7d60aa917531e46d200f3937684573ac 465 Gene3D G3DSA:3.20.20.70 8 258 2.0E-167 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_11660 7d60aa917531e46d200f3937684573ac 465 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 255 6.5E-87 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ambt_11660 7d60aa917531e46d200f3937684573ac 465 Gene3D G3DSA:3.20.20.70 259 459 2.0E-167 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_11660 7d60aa917531e46d200f3937684573ac 465 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 13-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 ambt_19890 adfc1017eaf45d3ee9e18a10c4c5cd36 383 SUPERFAMILY SSF54862 171 320 3.35E-17 T 13-10-2018 ambt_19890 adfc1017eaf45d3ee9e18a10c4c5cd36 383 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 16 351 3.0E-153 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 ambt_19890 adfc1017eaf45d3ee9e18a10c4c5cd36 383 Pfam PF08331 Domain of unknown function (DUF1730) 64 142 1.4E-24 T 13-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 ambt_19890 adfc1017eaf45d3ee9e18a10c4c5cd36 383 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 195 206 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ambt_19890 adfc1017eaf45d3ee9e18a10c4c5cd36 383 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 9 317 50.195 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 ambt_19890 adfc1017eaf45d3ee9e18a10c4c5cd36 383 Pfam PF13484 4Fe-4S double cluster binding domain 195 258 3.5E-19 T 13-10-2018 ambt_01980 e3ed61399c7f2d0ffb0e36a43c87e149 319 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ambt_01980 e3ed61399c7f2d0ffb0e36a43c87e149 319 TIGRFAM TIGR00874 talAB: transaldolase 3 317 5.2E-154 T 13-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ambt_01980 e3ed61399c7f2d0ffb0e36a43c87e149 319 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ambt_01980 e3ed61399c7f2d0ffb0e36a43c87e149 319 Hamap MF_00492 Transaldolase [tal]. 2 317 51.165 T 13-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ambt_01980 e3ed61399c7f2d0ffb0e36a43c87e149 319 Gene3D G3DSA:3.20.20.70 2 317 2.8E-141 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_01980 e3ed61399c7f2d0ffb0e36a43c87e149 319 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 311 8.3E-103 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ambt_01980 e3ed61399c7f2d0ffb0e36a43c87e149 319 SUPERFAMILY SSF51569 1 317 6.49E-116 T 13-10-2018 ambt_00075 fa827afe96d478979a4dd234a2a82874 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 2.9E-112 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 ambt_00075 fa827afe96d478979a4dd234a2a82874 483 PIRSF PIRSF006247 1 483 2.4E-180 T 13-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 ambt_00075 fa827afe96d478979a4dd234a2a82874 483 Pfam PF02386 Cation transport protein 39 477 8.4E-86 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 SUPERFAMILY SSF51445 241 626 3.91E-110 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 733 41.646 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 Gene3D G3DSA:2.60.40.10 3 224 1.2E-45 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 SUPERFAMILY SSF81296 138 229 1.19E-22 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 PIRSF PIRSF000463 6 733 1.1E-272 T 13-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 Pfam PF00128 Alpha amylase, catalytic domain 280 353 3.8E-5 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 Gene3D G3DSA:3.20.20.80 238 618 5.7E-165 T 13-10-2018 ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 Gene3D G3DSA:2.60.40.1180 629 733 3.9E-29 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 SUPERFAMILY SSF81296 18 102 2.2E-9 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 117 729 8.2E-252 T 13-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 SUPERFAMILY SSF51011 630 731 2.33E-26 T 13-10-2018 ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 139 208 2.9E-17 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 634 730 6.2E-17 T 13-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 ambt_05855 208aec2e15978abe2cc68ad3edfa8a74 733 SMART SM00642 253 656 1.2E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 Pfam PF02779 Transketolase, pyrimidine binding domain 319 478 2.2E-39 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 SUPERFAMILY SSF52922 492 624 2.62E-27 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 SMART SM00861 319 483 2.7E-65 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 625 45.416 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 13 624 3.1E-287 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 Gene3D G3DSA:3.40.50.920 500 625 9.8E-38 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 13 282 5.4E-121 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 Gene3D G3DSA:3.40.50.970 317 490 7.7E-66 T 13-10-2018 ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 SUPERFAMILY SSF52518 316 501 1.11E-56 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 SUPERFAMILY SSF52518 7 381 6.05E-80 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 Pfam PF02780 Transketolase, C-terminal domain 506 616 2.4E-24 T 13-10-2018 IPR033248 Transketolase, C-terminal domain ambt_04390 f888d776ff91fee7c8180193d03d38fd 625 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ambt_19695 6322833cc008361193382ce9cc120c1a 133 SUPERFAMILY SSF55021 69 129 5.04E-18 T 13-10-2018 ambt_19695 6322833cc008361193382ce9cc120c1a 133 Pfam PF10000 ACT domain 2 70 1.8E-20 T 13-10-2018 IPR018717 Domain of unknown function DUF2241 ambt_19695 6322833cc008361193382ce9cc120c1a 133 Pfam PF13840 ACT domain 76 126 1.7E-11 T 13-10-2018 IPR027795 CASTOR, ACT domain ambt_19695 6322833cc008361193382ce9cc120c1a 133 Gene3D G3DSA:3.30.2130.10 1 131 3.0E-44 T 13-10-2018 ambt_19695 6322833cc008361193382ce9cc120c1a 133 SUPERFAMILY SSF55021 2 65 2.47E-13 T 13-10-2018 ambt_12170 9bd681d1a19c1847e283bd5d327358d5 701 Pfam PF00563 EAL domain 444 678 5.6E-68 T 13-10-2018 IPR001633 EAL domain ambt_12170 9bd681d1a19c1847e283bd5d327358d5 701 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 426 3.6E-39 T 13-10-2018 IPR000160 GGDEF domain ambt_12170 9bd681d1a19c1847e283bd5d327358d5 701 SUPERFAMILY SSF141868 444 691 1.96E-83 T 13-10-2018 IPR035919 EAL domain superfamily ambt_12170 9bd681d1a19c1847e283bd5d327358d5 701 Gene3D G3DSA:3.30.70.270 262 439 2.7E-54 T 13-10-2018 ambt_12170 9bd681d1a19c1847e283bd5d327358d5 701 SMART SM00267 257 428 2.1E-55 T 13-10-2018 IPR000160 GGDEF domain ambt_12170 9bd681d1a19c1847e283bd5d327358d5 701 Pfam PF00990 Diguanylate cyclase, GGDEF domain 267 423 8.7E-45 T 13-10-2018 IPR000160 GGDEF domain ambt_12170 9bd681d1a19c1847e283bd5d327358d5 701 Gene3D G3DSA:3.20.20.450 440 690 2.9E-89 T 13-10-2018 IPR035919 EAL domain superfamily ambt_12170 9bd681d1a19c1847e283bd5d327358d5 701 SUPERFAMILY SSF55073 272 430 3.14E-44 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_12170 9bd681d1a19c1847e283bd5d327358d5 701 SMART SM00052 438 683 1.3E-97 T 13-10-2018 IPR001633 EAL domain ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 SMART SM00065 21 172 0.0026 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 Pfam PF00437 Type II/IV secretion system protein 361 620 6.7E-74 T 13-10-2018 IPR001482 Type II/IV secretion system protein ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 Gene3D G3DSA:3.30.450.90 319 454 2.5E-41 T 13-10-2018 ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 210 310 4.2E-8 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 548 562 - T 13-10-2018 IPR001482 Type II/IV secretion system protein ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 SUPERFAMILY SSF160246 179 308 2.35E-7 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 Gene3D G3DSA:3.30.450.40 1 167 7.4E-27 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 Gene3D G3DSA:3.40.50.300 457 735 3.6E-104 T 13-10-2018 ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 SUPERFAMILY SSF52540 335 731 5.76E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 Pfam PF01590 GAF domain 36 163 2.9E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 SMART SM00382 481 606 1.2E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_16550 6385c0ad1720cb8bcc66a06917597542 738 SUPERFAMILY SSF55781 10 162 1.21E-21 T 13-10-2018 ambt_13365 9b3620fb16118ee24b15f8751e6cc588 503 SUPERFAMILY SSF53756 225 429 2.98E-6 T 13-10-2018 ambt_13365 9b3620fb16118ee24b15f8751e6cc588 503 Gene3D G3DSA:3.40.50.11820 153 308 2.1E-10 T 13-10-2018 ambt_13365 9b3620fb16118ee24b15f8751e6cc588 503 Gene3D G3DSA:3.40.50.12580 309 471 5.9E-28 T 13-10-2018 ambt_13365 9b3620fb16118ee24b15f8751e6cc588 503 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 160 463 2.5E-38 T 13-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 ambt_21400 d0dc36d52041512a2ecdcb31509fd022 209 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 32 7.1E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_21400 d0dc36d52041512a2ecdcb31509fd022 209 Gene3D G3DSA:3.55.40.10 41 209 9.9E-43 T 13-10-2018 ambt_21400 d0dc36d52041512a2ecdcb31509fd022 209 PRINTS PR00885 Bacterial general secretion pathway protein H signature 158 173 3.2E-15 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 ambt_21400 d0dc36d52041512a2ecdcb31509fd022 209 PRINTS PR00885 Bacterial general secretion pathway protein H signature 9 23 3.2E-15 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 ambt_21400 d0dc36d52041512a2ecdcb31509fd022 209 PRINTS PR00885 Bacterial general secretion pathway protein H signature 24 38 3.2E-15 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 ambt_21400 d0dc36d52041512a2ecdcb31509fd022 209 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 33 2.1E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_21400 d0dc36d52041512a2ecdcb31509fd022 209 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 11 174 4.7E-15 T 13-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 ambt_21400 d0dc36d52041512a2ecdcb31509fd022 209 SUPERFAMILY SSF54523 14 96 1.41E-8 T 13-10-2018 ambt_16820 c99e5259e78e1ac9ca29a86106e3cb2c 458 Gene3D G3DSA:3.40.250.10 355 456 3.5E-17 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_16820 c99e5259e78e1ac9ca29a86106e3cb2c 458 SUPERFAMILY SSF56281 2 224 2.24E-43 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_16820 c99e5259e78e1ac9ca29a86106e3cb2c 458 SMART SM00450 360 457 6.0E-11 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_16820 c99e5259e78e1ac9ca29a86106e3cb2c 458 SMART SM00450 256 348 1.8 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_16820 c99e5259e78e1ac9ca29a86106e3cb2c 458 SMART SM00849 12 180 2.7E-22 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_16820 c99e5259e78e1ac9ca29a86106e3cb2c 458 Gene3D G3DSA:3.40.250.10 250 350 6.2E-14 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_16820 c99e5259e78e1ac9ca29a86106e3cb2c 458 Pfam PF00753 Metallo-beta-lactamase superfamily 13 180 2.5E-12 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_16820 c99e5259e78e1ac9ca29a86106e3cb2c 458 SUPERFAMILY SSF52821 258 335 2.1E-12 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_16820 c99e5259e78e1ac9ca29a86106e3cb2c 458 Gene3D G3DSA:3.60.15.10 1 243 6.3E-64 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_16820 c99e5259e78e1ac9ca29a86106e3cb2c 458 Pfam PF00581 Rhodanese-like domain 362 453 8.0E-6 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_16820 c99e5259e78e1ac9ca29a86106e3cb2c 458 SUPERFAMILY SSF52821 350 453 6.16E-21 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 SUPERFAMILY SSF51735 131 313 1.44E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 132 242 1.2E-21 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 297 454 1.2E-46 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 290 297 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 Gene3D G3DSA:3.40.50.720 133 467 1.4E-114 T 13-10-2018 ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 313 329 1.6E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 250 263 1.6E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 286 304 1.6E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 369 386 1.6E-17 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 SMART SM00846 131 292 1.9E-54 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 SUPERFAMILY SSF55347 292 455 1.52E-52 T 13-10-2018 ambt_05880 4f139920ebd1ae6a9cbb0e142b3c18f2 481 Gene3D G3DSA:3.30.360.10 291 456 1.4E-114 T 13-10-2018 ambt_13325 8d78a86a3cc57ef6533e90bec991ddfb 396 Gene3D G3DSA:3.40.640.10 1 259 4.0E-87 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_13325 8d78a86a3cc57ef6533e90bec991ddfb 396 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 390 4.1E-159 T 13-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase ambt_13325 8d78a86a3cc57ef6533e90bec991ddfb 396 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 388 5.3E-101 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ambt_13325 8d78a86a3cc57ef6533e90bec991ddfb 396 Gene3D G3DSA:3.90.1150.10 260 393 6.9E-30 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_13325 8d78a86a3cc57ef6533e90bec991ddfb 396 PIRSF PIRSF000390 1 393 4.4E-103 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ambt_13325 8d78a86a3cc57ef6533e90bec991ddfb 396 SUPERFAMILY SSF53383 2 391 4.31E-105 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_04070 a311442a65573e7c85d0768a9d815621 784 Gene3D G3DSA:3.30.230.10 585 772 1.3E-85 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_04070 a311442a65573e7c85d0768a9d815621 784 Gene3D G3DSA:1.20.58.1480 120 245 1.6E-45 T 13-10-2018 ambt_04070 a311442a65573e7c85d0768a9d815621 784 Gene3D G3DSA:2.30.130.40 1 118 3.8E-35 T 13-10-2018 ambt_04070 a311442a65573e7c85d0768a9d815621 784 Gene3D G3DSA:1.10.8.60 491 584 5.6E-33 T 13-10-2018 ambt_04070 a311442a65573e7c85d0768a9d815621 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 3.7E-17 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_04070 a311442a65573e7c85d0768a9d815621 784 SUPERFAMILY SSF54211 595 770 6.07E-59 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_04070 a311442a65573e7c85d0768a9d815621 784 Hamap MF_01973 Lon protease [lon]. 11 772 71.888 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 ambt_04070 a311442a65573e7c85d0768a9d815621 784 PIRSF PIRSF001174 1 774 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ambt_04070 a311442a65573e7c85d0768a9d815621 784 SUPERFAMILY SSF88697 10 201 4.22E-49 T 13-10-2018 IPR015947 PUA-like superfamily ambt_04070 a311442a65573e7c85d0768a9d815621 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 5.3E-41 T 13-10-2018 IPR003111 Lon, substrate-binding domain ambt_04070 a311442a65573e7c85d0768a9d815621 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 1.6E-99 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 ambt_04070 a311442a65573e7c85d0768a9d815621 784 SUPERFAMILY SSF52540 314 588 3.68E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04070 a311442a65573e7c85d0768a9d815621 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ambt_04070 a311442a65573e7c85d0768a9d815621 784 SMART SM00464 10 202 1.0E-76 T 13-10-2018 IPR003111 Lon, substrate-binding domain ambt_04070 a311442a65573e7c85d0768a9d815621 784 SMART SM00382 348 492 3.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_04070 a311442a65573e7c85d0768a9d815621 784 Gene3D G3DSA:3.40.50.300 314 490 2.3E-61 T 13-10-2018 ambt_04070 a311442a65573e7c85d0768a9d815621 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 ambt_04070 a311442a65573e7c85d0768a9d815621 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 3.3E-55 T 13-10-2018 ambt_04070 a311442a65573e7c85d0768a9d815621 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 3.3E-55 T 13-10-2018 ambt_04070 a311442a65573e7c85d0768a9d815621 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 3.3E-55 T 13-10-2018 ambt_04070 a311442a65573e7c85d0768a9d815621 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 3.3E-55 T 13-10-2018 ambt_04070 a311442a65573e7c85d0768a9d815621 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 3.3E-55 T 13-10-2018 ambt_19705 7167e1ad29053901e18f661038d7589a 352 Hamap MF_00219 Dihydroorotase [pyrC]. 2 343 45.483 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_19705 7167e1ad29053901e18f661038d7589a 352 Gene3D G3DSA:3.20.20.140 2 344 2.6E-108 T 13-10-2018 ambt_19705 7167e1ad29053901e18f661038d7589a 352 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_19705 7167e1ad29053901e18f661038d7589a 352 Pfam PF01979 Amidohydrolase family 11 314 1.7E-14 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ambt_19705 7167e1ad29053901e18f661038d7589a 352 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_19705 7167e1ad29053901e18f661038d7589a 352 PIRSF PIRSF001237 1 345 2.7E-141 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_19705 7167e1ad29053901e18f661038d7589a 352 SUPERFAMILY SSF51556 1 342 1.23E-143 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_19705 7167e1ad29053901e18f661038d7589a 352 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 343 5.3E-134 T 13-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_03010 37cdff064f6391f72d5d31a69682f9c0 173 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 26 165 1.9E-25 T 13-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ambt_03010 37cdff064f6391f72d5d31a69682f9c0 173 Gene3D G3DSA:3.30.1330.40 19 170 3.6E-53 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ambt_03010 37cdff064f6391f72d5d31a69682f9c0 173 SUPERFAMILY SSF55298 23 170 6.75E-45 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ambt_15250 afa98e9739f039d0295bbabb601f7335 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 2.4E-22 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ambt_15250 afa98e9739f039d0295bbabb601f7335 189 PIRSF PIRSF005901 2 188 2.0E-65 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP ambt_15250 afa98e9739f039d0295bbabb601f7335 189 SUPERFAMILY SSF50249 130 187 2.91E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_15250 afa98e9739f039d0295bbabb601f7335 189 Gene3D G3DSA:2.30.30.30 1 65 2.7E-27 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 ambt_15250 afa98e9739f039d0295bbabb601f7335 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.6E-25 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ambt_15250 afa98e9739f039d0295bbabb601f7335 189 Gene3D G3DSA:2.40.50.140 66 129 4.0E-28 T 13-10-2018 ambt_15250 afa98e9739f039d0295bbabb601f7335 189 Gene3D G3DSA:2.40.50.140 130 188 2.3E-27 T 13-10-2018 ambt_15250 afa98e9739f039d0295bbabb601f7335 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 2.7E-78 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ambt_15250 afa98e9739f039d0295bbabb601f7335 189 SUPERFAMILY SSF50249 70 128 2.1E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_15250 afa98e9739f039d0295bbabb601f7335 189 SUPERFAMILY SSF50104 2 63 1.25E-20 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily ambt_15250 afa98e9739f039d0295bbabb601f7335 189 SMART SM00841 131 186 4.2E-32 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ambt_15250 afa98e9739f039d0295bbabb601f7335 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 3.4E-25 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like ambt_15250 afa98e9739f039d0295bbabb601f7335 189 SMART SM01185 69 123 3.0E-26 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ambt_15250 afa98e9739f039d0295bbabb601f7335 189 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site ambt_15250 afa98e9739f039d0295bbabb601f7335 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.093 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ambt_10265 413a4c0578f5c7a44a19b82ddcb97db0 486 Gene3D G3DSA:3.40.190.10 130 224 1.1E-56 T 13-10-2018 ambt_10265 413a4c0578f5c7a44a19b82ddcb97db0 486 Pfam PF00990 Diguanylate cyclase, GGDEF domain 329 478 2.4E-18 T 13-10-2018 IPR000160 GGDEF domain ambt_10265 413a4c0578f5c7a44a19b82ddcb97db0 486 Gene3D G3DSA:3.30.70.270 322 485 1.3E-26 T 13-10-2018 ambt_10265 413a4c0578f5c7a44a19b82ddcb97db0 486 SUPERFAMILY SSF55073 333 482 3.92E-21 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_10265 413a4c0578f5c7a44a19b82ddcb97db0 486 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 262 7.1E-31 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_10265 413a4c0578f5c7a44a19b82ddcb97db0 486 SMART SM00062 46 265 2.1E-22 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_10265 413a4c0578f5c7a44a19b82ddcb97db0 486 SUPERFAMILY SSF53850 47 264 4.59E-40 T 13-10-2018 ambt_10265 413a4c0578f5c7a44a19b82ddcb97db0 486 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 484 7.3E-24 T 13-10-2018 IPR000160 GGDEF domain ambt_10265 413a4c0578f5c7a44a19b82ddcb97db0 486 SMART SM00267 317 485 4.0E-13 T 13-10-2018 IPR000160 GGDEF domain ambt_10265 413a4c0578f5c7a44a19b82ddcb97db0 486 Gene3D G3DSA:3.40.190.10 44 261 1.1E-56 T 13-10-2018 ambt_08385 2c0cd0c378b9d4a24380ff5ec8237484 408 Gene3D G3DSA:3.30.565.10 278 348 4.4E-11 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_08385 2c0cd0c378b9d4a24380ff5ec8237484 408 SUPERFAMILY SSF47384 201 278 3.14E-9 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_08385 2c0cd0c378b9d4a24380ff5ec8237484 408 SMART SM00388 218 280 6.8E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_08385 2c0cd0c378b9d4a24380ff5ec8237484 408 SUPERFAMILY SSF55874 280 396 1.19E-9 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_08385 2c0cd0c378b9d4a24380ff5ec8237484 408 Gene3D G3DSA:1.20.1480.50 117 222 1.5E-5 T 13-10-2018 ambt_08385 2c0cd0c378b9d4a24380ff5ec8237484 408 Gene3D G3DSA:1.10.287.130 223 277 4.4E-11 T 13-10-2018 ambt_08385 2c0cd0c378b9d4a24380ff5ec8237484 408 Pfam PF00512 His Kinase A (phospho-acceptor) domain 220 279 4.7E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_21420 0533515ade20b6f630379aa429cca5a6 399 Gene3D G3DSA:3.30.420.380 2 235 9.6E-81 T 13-10-2018 ambt_21420 0533515ade20b6f630379aa429cca5a6 399 Gene3D G3DSA:3.30.1360.100 313 398 2.1E-24 T 13-10-2018 ambt_21420 0533515ade20b6f630379aa429cca5a6 399 Pfam PF05134 Type II secretion system (T2SS), protein L 4 237 1.3E-56 T 13-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain ambt_21420 0533515ade20b6f630379aa429cca5a6 399 Pfam PF12693 GspL periplasmic domain 244 397 2.9E-31 T 13-10-2018 IPR025691 GspL periplasmic domain ambt_21420 0533515ade20b6f630379aa429cca5a6 399 SUPERFAMILY SSF53067 1 143 1.81E-37 T 13-10-2018 ambt_21420 0533515ade20b6f630379aa429cca5a6 399 Gene3D G3DSA:3.30.420.370 141 213 9.6E-81 T 13-10-2018 ambt_21420 0533515ade20b6f630379aa429cca5a6 399 SUPERFAMILY SSF53067 145 236 1.1E-19 T 13-10-2018 ambt_21420 0533515ade20b6f630379aa429cca5a6 399 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 4 397 2.1E-78 T 13-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 ambt_21420 0533515ade20b6f630379aa429cca5a6 399 PIRSF PIRSF015761 19 398 1.1E-25 T 13-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 ambt_06970 d1275767d08b0ee7493c0f67d4f385d7 397 Gene3D G3DSA:1.20.1250.20 11 204 8.9E-28 T 13-10-2018 ambt_06970 d1275767d08b0ee7493c0f67d4f385d7 397 Pfam PF07690 Major Facilitator Superfamily 19 271 2.1E-28 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_06970 d1275767d08b0ee7493c0f67d4f385d7 397 SUPERFAMILY SSF103473 9 390 1.7E-54 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_06970 d1275767d08b0ee7493c0f67d4f385d7 397 Gene3D G3DSA:1.20.1250.20 205 390 1.4E-17 T 13-10-2018 ambt_03375 585cfb797dcd913d91cf27ca5bdc2bf6 1109 Pfam PF00069 Protein kinase domain 85 286 4.5E-34 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ambt_03375 585cfb797dcd913d91cf27ca5bdc2bf6 1109 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 89 114 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 ambt_03375 585cfb797dcd913d91cf27ca5bdc2bf6 1109 SUPERFAMILY SSF56112 80 345 3.64E-48 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_03375 585cfb797dcd913d91cf27ca5bdc2bf6 1109 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 207 219 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 ambt_03375 585cfb797dcd913d91cf27ca5bdc2bf6 1109 Gene3D G3DSA:3.30.200.20 77 167 1.0E-50 T 13-10-2018 ambt_03375 585cfb797dcd913d91cf27ca5bdc2bf6 1109 SMART SM00220 83 317 1.2E-17 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ambt_03375 585cfb797dcd913d91cf27ca5bdc2bf6 1109 Gene3D G3DSA:1.10.510.10 168 315 1.0E-50 T 13-10-2018 ambt_19640 3b513b8d7c4b702c95f9323c5ade341b 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 8.2E-32 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19640 3b513b8d7c4b702c95f9323c5ade341b 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 124 3.0E-23 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19640 3b513b8d7c4b702c95f9323c5ade341b 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 2.1E-45 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19640 3b513b8d7c4b702c95f9323c5ade341b 124 SUPERFAMILY SSF48300 4 60 9.94E-15 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19640 3b513b8d7c4b702c95f9323c5ade341b 124 Gene3D G3DSA:1.20.5.710 2 53 1.1E-20 T 13-10-2018 ambt_19640 3b513b8d7c4b702c95f9323c5ade341b 124 Gene3D G3DSA:3.30.1390.10 54 124 2.6E-32 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ambt_19640 3b513b8d7c4b702c95f9323c5ade341b 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 25.198 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19640 3b513b8d7c4b702c95f9323c5ade341b 124 SUPERFAMILY SSF54736 53 124 1.4E-25 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ambt_19640 3b513b8d7c4b702c95f9323c5ade341b 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 1.5E-14 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_06465 03c08f02e14236c5fa9b9d15abbcf059 294 Pfam PF00899 ThiF family 13 279 2.3E-56 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ambt_06465 03c08f02e14236c5fa9b9d15abbcf059 294 Gene3D G3DSA:3.40.50.720 5 125 5.4E-39 T 13-10-2018 ambt_06465 03c08f02e14236c5fa9b9d15abbcf059 294 Gene3D G3DSA:3.40.50.720 130 291 4.7E-36 T 13-10-2018 ambt_06465 03c08f02e14236c5fa9b9d15abbcf059 294 SUPERFAMILY SSF69572 5 285 2.35E-74 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ambt_04585 929248253d2463a9702cb65a8c484701 640 Gene3D G3DSA:3.30.565.10 1 228 1.1E-77 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_04585 929248253d2463a9702cb65a8c484701 640 Gene3D G3DSA:3.30.230.80 241 408 1.7E-70 T 13-10-2018 ambt_04585 929248253d2463a9702cb65a8c484701 640 SUPERFAMILY SSF55874 8 218 1.7E-68 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_04585 929248253d2463a9702cb65a8c484701 640 Gene3D G3DSA:1.20.120.790 504 637 7.7E-45 T 13-10-2018 IPR037196 HSP90, C-terminal domain ambt_04585 929248253d2463a9702cb65a8c484701 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 186 1.7E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_04585 929248253d2463a9702cb65a8c484701 640 Gene3D G3DSA:3.40.50.11260 409 498 2.5E-34 T 13-10-2018 ambt_04585 929248253d2463a9702cb65a8c484701 640 PIRSF PIRSF002583 1 640 1.4E-222 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 ambt_04585 929248253d2463a9702cb65a8c484701 640 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 13-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 ambt_04585 929248253d2463a9702cb65a8c484701 640 SUPERFAMILY SSF54211 242 497 2.35E-99 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_04585 929248253d2463a9702cb65a8c484701 640 PRINTS PR00775 90kDa heat shock protein signature 175 192 1.1E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ambt_04585 929248253d2463a9702cb65a8c484701 640 PRINTS PR00775 90kDa heat shock protein signature 8 28 1.1E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ambt_04585 929248253d2463a9702cb65a8c484701 640 PRINTS PR00775 90kDa heat shock protein signature 193 211 1.1E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ambt_04585 929248253d2463a9702cb65a8c484701 640 PRINTS PR00775 90kDa heat shock protein signature 123 145 1.1E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ambt_04585 929248253d2463a9702cb65a8c484701 640 PRINTS PR00775 90kDa heat shock protein signature 96 113 1.1E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ambt_04585 929248253d2463a9702cb65a8c484701 640 PRINTS PR00775 90kDa heat shock protein signature 29 51 1.1E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ambt_04585 929248253d2463a9702cb65a8c484701 640 PRINTS PR00775 90kDa heat shock protein signature 78 95 1.1E-62 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal ambt_04585 929248253d2463a9702cb65a8c484701 640 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 636 32.82 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 ambt_04585 929248253d2463a9702cb65a8c484701 640 SUPERFAMILY SSF110942 524 636 4.18E-35 T 13-10-2018 IPR037196 HSP90, C-terminal domain ambt_04585 929248253d2463a9702cb65a8c484701 640 SMART SM00387 30 187 8.8E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_04585 929248253d2463a9702cb65a8c484701 640 Pfam PF00183 Hsp90 protein 228 637 9.8E-133 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 SUPERFAMILY SSF49503 117 288 8.65E-48 T 13-10-2018 IPR008972 Cupredoxin ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 146 223 1.0E-18 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 Gene3D G3DSA:2.60.40.2600 119 339 1.4E-74 T 13-10-2018 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 SUPERFAMILY SSF81464 29 111 3.27E-5 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 PRINTS PR01166 Cytochrome c oxidase subunit II signature 208 225 2.2E-13 T 13-10-2018 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 PRINTS PR01166 Cytochrome c oxidase subunit II signature 146 167 2.2E-13 T 13-10-2018 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 PRINTS PR01166 Cytochrome c oxidase subunit II signature 87 107 2.2E-13 T 13-10-2018 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 PRINTS PR01166 Cytochrome c oxidase subunit II signature 170 190 2.2E-13 T 13-10-2018 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 207 2.2E-13 T 13-10-2018 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 SUPERFAMILY SSF46626 246 338 1.41E-7 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 Pfam PF00034 Cytochrome c 252 338 1.0E-12 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 171 219 - T 13-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09275 429ba43b9009e757ac9eb6a0f8e2fcb8 339 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 36 235 3.5E-49 T 13-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_17100 ed0e7df99eb22318362ca571f2cdf2d1 350 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 298 340 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ambt_17100 ed0e7df99eb22318362ca571f2cdf2d1 350 Gene3D G3DSA:1.10.10.60 241 349 7.2E-23 T 13-10-2018 ambt_17100 ed0e7df99eb22318362ca571f2cdf2d1 350 SMART SM00342 261 344 1.6E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_17100 ed0e7df99eb22318362ca571f2cdf2d1 350 Pfam PF12833 Helix-turn-helix domain 267 346 2.9E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_17100 ed0e7df99eb22318362ca571f2cdf2d1 350 SUPERFAMILY SSF46689 297 347 2.15E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_15410 1d2125e5832c39ea4e8426d0f394bd5b 193 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ambt_15410 1d2125e5832c39ea4e8426d0f394bd5b 193 Gene3D G3DSA:3.90.79.10 13 173 1.6E-47 T 13-10-2018 ambt_15410 1d2125e5832c39ea4e8426d0f394bd5b 193 PRINTS PR00502 NUDIX hydrolase family signature 60 75 9.3E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ambt_15410 1d2125e5832c39ea4e8426d0f394bd5b 193 PRINTS PR00502 NUDIX hydrolase family signature 46 60 9.3E-8 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ambt_15410 1d2125e5832c39ea4e8426d0f394bd5b 193 SUPERFAMILY SSF55811 19 166 5.42E-31 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ambt_15410 1d2125e5832c39ea4e8426d0f394bd5b 193 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 14 169 36.518 T 13-10-2018 IPR022927 RNA pyrophosphohydrolase RppH ambt_15410 1d2125e5832c39ea4e8426d0f394bd5b 193 Pfam PF00293 NUDIX domain 20 159 1.4E-25 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 4.3E-92 T 13-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 Gene3D G3DSA:3.10.580.10 135 262 2.3E-37 T 13-10-2018 ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 Pfam PF03448 MgtE intracellular N domain 36 137 3.2E-23 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 SUPERFAMILY SSF161093 280 451 1.44E-44 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 Pfam PF01769 Divalent cation transporter 326 444 5.8E-23 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 Gene3D G3DSA:1.25.60.10 8 134 2.1E-18 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 Pfam PF00571 CBS domain 142 197 6.5E-5 T 13-10-2018 IPR000644 CBS domain ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 Pfam PF00571 CBS domain 203 257 4.9E-5 T 13-10-2018 IPR000644 CBS domain ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 Gene3D G3DSA:1.10.357.20 277 452 3.7E-46 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 SMART SM00924 36 139 3.3E-34 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 SUPERFAMILY SSF158791 12 136 1.96E-28 T 13-10-2018 ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 SUPERFAMILY SSF54631 138 278 2.65E-30 T 13-10-2018 ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 SMART SM00116 146 199 17.0 T 13-10-2018 IPR000644 CBS domain ambt_14630 e4c7ebd6b857f18d8c5488f907a0d732 452 SMART SM00116 210 258 0.14 T 13-10-2018 IPR000644 CBS domain ambt_11610 c8e12e5f96bb8487bb438c096a4c31ca 267 SUPERFAMILY SSF51430 3 262 2.23E-82 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_11610 c8e12e5f96bb8487bb438c096a4c31ca 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 30 47 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ambt_11610 c8e12e5f96bb8487bb438c096a4c31ca 267 Gene3D G3DSA:3.20.20.100 1 267 7.5E-91 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_11610 c8e12e5f96bb8487bb438c096a4c31ca 267 Pfam PF00248 Aldo/keto reductase family 7 252 1.5E-51 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain ambt_11610 c8e12e5f96bb8487bb438c096a4c31ca 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 115 132 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ambt_11610 c8e12e5f96bb8487bb438c096a4c31ca 267 PRINTS PR00069 Aldo-keto reductase signature 150 179 1.4E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_11610 c8e12e5f96bb8487bb438c096a4c31ca 267 PRINTS PR00069 Aldo-keto reductase signature 26 50 1.4E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_11610 c8e12e5f96bb8487bb438c096a4c31ca 267 PRINTS PR00069 Aldo-keto reductase signature 82 100 1.4E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_11610 c8e12e5f96bb8487bb438c096a4c31ca 267 PRINTS PR00069 Aldo-keto reductase signature 187 211 1.4E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_11610 c8e12e5f96bb8487bb438c096a4c31ca 267 PRINTS PR00069 Aldo-keto reductase signature 115 132 1.4E-45 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_11610 c8e12e5f96bb8487bb438c096a4c31ca 267 PIRSF PIRSF000097 1 267 5.8E-68 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_03465 c60647c3c909c82d1cf30aad321679ed 196 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.953 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 ambt_03465 c60647c3c909c82d1cf30aad321679ed 196 SUPERFAMILY SSF52540 1 141 1.22E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_03465 c60647c3c909c82d1cf30aad321679ed 196 Pfam PF00265 Thymidine kinase 2 186 1.2E-56 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 ambt_03465 c60647c3c909c82d1cf30aad321679ed 196 SUPERFAMILY SSF57716 142 193 6.65E-18 T 13-10-2018 ambt_03465 c60647c3c909c82d1cf30aad321679ed 196 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 13-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 ambt_03465 c60647c3c909c82d1cf30aad321679ed 196 Gene3D G3DSA:3.40.50.300 1 141 5.3E-26 T 13-10-2018 ambt_03465 c60647c3c909c82d1cf30aad321679ed 196 Gene3D G3DSA:3.30.60.20 144 189 4.3E-10 T 13-10-2018 ambt_03465 c60647c3c909c82d1cf30aad321679ed 196 PIRSF PIRSF035805 1 195 8.4E-57 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 ambt_08040 743c81adec3331c398b6b212f181e371 886 Gene3D G3DSA:1.25.50.10 562 879 1.4E-98 T 13-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily ambt_08040 743c81adec3331c398b6b212f181e371 886 Gene3D G3DSA:2.60.40.1840 458 559 4.3E-14 T 13-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily ambt_08040 743c81adec3331c398b6b212f181e371 886 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 564 879 1.5E-101 T 13-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal ambt_08040 743c81adec3331c398b6b212f181e371 886 SUPERFAMILY SSF63737 6 207 4.18E-37 T 13-10-2018 ambt_08040 743c81adec3331c398b6b212f181e371 886 Gene3D G3DSA:1.10.390.10 294 457 2.2E-64 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily ambt_08040 743c81adec3331c398b6b212f181e371 886 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 458 559 5.3E-18 T 13-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold ambt_08040 743c81adec3331c398b6b212f181e371 886 Gene3D G3DSA:1.10.1740.60 209 293 4.3E-38 T 13-10-2018 ambt_08040 743c81adec3331c398b6b212f181e371 886 SUPERFAMILY SSF55486 218 463 3.48E-73 T 13-10-2018 ambt_08040 743c81adec3331c398b6b212f181e371 886 Gene3D G3DSA:2.60.40.1730 13 208 2.7E-64 T 13-10-2018 ambt_08040 743c81adec3331c398b6b212f181e371 886 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 10 878 0.0 T 13-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 ambt_08040 743c81adec3331c398b6b212f181e371 886 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 190 205 5.3E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_08040 743c81adec3331c398b6b212f181e371 886 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 272 282 5.3E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_08040 743c81adec3331c398b6b212f181e371 886 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 141 156 5.3E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_08040 743c81adec3331c398b6b212f181e371 886 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 308 323 5.3E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_08040 743c81adec3331c398b6b212f181e371 886 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 327 339 5.3E-9 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_08040 743c81adec3331c398b6b212f181e371 886 Pfam PF01433 Peptidase family M1 domain 222 452 4.7E-62 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_08805 2ad9c843170d95c8f93b85f09d845122 239 SUPERFAMILY SSF52540 6 216 5.22E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_08805 2ad9c843170d95c8f93b85f09d845122 239 SMART SM00382 31 212 4.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_08805 2ad9c843170d95c8f93b85f09d845122 239 Gene3D G3DSA:3.40.50.300 1 225 1.0E-57 T 13-10-2018 ambt_08805 2ad9c843170d95c8f93b85f09d845122 239 Pfam PF00005 ABC transporter 22 165 1.2E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_16405 2752848dba48ac2bef524595c63c48e7 183 Gene3D G3DSA:3.40.50.300 64 183 7.2E-25 T 13-10-2018 ambt_16405 2752848dba48ac2bef524595c63c48e7 183 Pfam PF01695 IstB-like ATP binding protein 56 180 4.4E-36 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ambt_16405 2752848dba48ac2bef524595c63c48e7 183 SUPERFAMILY SSF52540 97 174 3.78E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_16405 2752848dba48ac2bef524595c63c48e7 183 Pfam PF08483 IstB-like ATP binding N-terminal 27 55 4.1E-10 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 447 3.6E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 410 427 3.6E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 Pfam PF02954 Bacterial regulatory protein, Fis family 405 443 5.3E-6 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 Gene3D G3DSA:3.40.50.300 131 313 5.6E-67 T 13-10-2018 ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 SUPERFAMILY SSF52540 143 384 6.48E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 SMART SM00382 163 306 9.7E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 SUPERFAMILY SSF46689 356 446 8.96E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 SMART SM00448 3 117 4.3E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 Pfam PF00072 Response regulator receiver domain 5 114 3.1E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 5 446 6.1E-211 T 13-10-2018 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 SUPERFAMILY SSF52172 4 188 3.42E-29 T 13-10-2018 IPR011006 CheY-like superfamily ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 Pfam PF00158 Sigma-54 interaction domain 143 309 2.3E-72 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 Gene3D G3DSA:3.40.50.2300 2 130 1.3E-21 T 13-10-2018 ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 Gene3D G3DSA:1.10.8.60 314 381 5.2E-22 T 13-10-2018 ambt_02105 033480c688d29f8f0f9a7599573d9a6e 453 Gene3D G3DSA:1.10.10.60 393 448 3.9E-11 T 13-10-2018 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 SUPERFAMILY SSF57783 752 815 2.21E-19 T 13-10-2018 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 717 752 3.2E-10 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 605 630 1.2E-5 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 330 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 643 1.2E-250 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Pfam PF08272 Topoisomerase I zinc-ribbon-like 832 871 7.2E-19 T 13-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Pfam PF08272 Topoisomerase I zinc-ribbon-like 766 801 4.6E-13 T 13-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Gene3D G3DSA:3.30.65.10 706 752 1.2E-5 T 13-10-2018 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Gene3D G3DSA:3.30.65.10 753 815 4.8E-32 T 13-10-2018 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 SMART SM00493 3 139 3.6E-34 T 13-10-2018 IPR006171 TOPRIM domain ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Pfam PF01751 Toprim domain 5 149 2.0E-31 T 13-10-2018 IPR006171 TOPRIM domain ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Gene3D G3DSA:2.20.25.10 816 873 4.6E-28 T 13-10-2018 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 740 54.941 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 SMART SM00437 279 535 2.5E-119 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 SMART SM00436 140 228 7.3E-49 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 SUPERFAMILY SSF56712 3 617 1.2E-201 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Gene3D G3DSA:3.40.50.140 1 170 7.1E-65 T 13-10-2018 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 SUPERFAMILY SSF57783 708 751 3.06E-6 T 13-10-2018 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Gene3D G3DSA:2.70.20.10 220 481 1.1E-162 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Pfam PF01131 DNA topoisomerase 164 572 3.7E-130 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 321 330 2.1E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 2.1E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 113 126 2.1E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 498 512 2.1E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 198 216 2.1E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Gene3D G3DSA:1.10.290.10 287 411 1.1E-162 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 Gene3D G3DSA:1.10.460.10 172 579 1.1E-162 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ambt_10120 a4a080404fa5451157c4d724b8f1d973 888 SUPERFAMILY SSF57783 817 871 1.87E-19 T 13-10-2018 ambt_10795 11031a011f1e2fb7bcdbeb9527645cfa 305 SMART SM00448 11 123 6.2E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_10795 11031a011f1e2fb7bcdbeb9527645cfa 305 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 136 303 2.7E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_10795 11031a011f1e2fb7bcdbeb9527645cfa 305 Pfam PF00990 Diguanylate cyclase, GGDEF domain 141 302 8.6E-42 T 13-10-2018 IPR000160 GGDEF domain ambt_10795 11031a011f1e2fb7bcdbeb9527645cfa 305 SUPERFAMILY SSF55073 145 303 2.75E-38 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_10795 11031a011f1e2fb7bcdbeb9527645cfa 305 SMART SM00267 129 305 1.9E-43 T 13-10-2018 IPR000160 GGDEF domain ambt_10795 11031a011f1e2fb7bcdbeb9527645cfa 305 Gene3D G3DSA:3.30.70.270 134 304 4.6E-46 T 13-10-2018 ambt_10795 11031a011f1e2fb7bcdbeb9527645cfa 305 Gene3D G3DSA:3.40.50.2300 4 133 8.9E-36 T 13-10-2018 ambt_10795 11031a011f1e2fb7bcdbeb9527645cfa 305 Pfam PF00072 Response regulator receiver domain 13 124 9.8E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_10795 11031a011f1e2fb7bcdbeb9527645cfa 305 SUPERFAMILY SSF52172 11 139 4.13E-37 T 13-10-2018 IPR011006 CheY-like superfamily ambt_14250 1f0f1a6dc72df03bac7d0250e6f97da7 1223 SUPERFAMILY SSF52540 1 1208 2.98E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14250 1f0f1a6dc72df03bac7d0250e6f97da7 1223 Gene3D G3DSA:3.40.50.300 942 1213 1.1E-24 T 13-10-2018 ambt_14250 1f0f1a6dc72df03bac7d0250e6f97da7 1223 Pfam PF13476 AAA domain 6 263 5.9E-27 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain ambt_14250 1f0f1a6dc72df03bac7d0250e6f97da7 1223 Gene3D G3DSA:3.40.50.300 1 285 7.9E-45 T 13-10-2018 ambt_14250 1f0f1a6dc72df03bac7d0250e6f97da7 1223 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1111 1175 1.6E-14 T 13-10-2018 ambt_09075 9ea02881f3c810cdb0aba0d08e758af4 396 Gene3D G3DSA:3.90.1150.10 6 392 6.8E-148 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_09075 9ea02881f3c810cdb0aba0d08e758af4 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 8.9E-30 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ambt_09075 9ea02881f3c810cdb0aba0d08e758af4 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 8.9E-30 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ambt_09075 9ea02881f3c810cdb0aba0d08e758af4 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 8.9E-30 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ambt_09075 9ea02881f3c810cdb0aba0d08e758af4 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 8.9E-30 T 13-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ambt_09075 9ea02881f3c810cdb0aba0d08e758af4 396 Gene3D G3DSA:3.40.640.10 60 300 6.8E-148 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_09075 9ea02881f3c810cdb0aba0d08e758af4 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ambt_09075 9ea02881f3c810cdb0aba0d08e758af4 396 Pfam PF00155 Aminotransferase class I and II 27 392 5.7E-72 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ambt_09075 9ea02881f3c810cdb0aba0d08e758af4 396 SUPERFAMILY SSF53383 3 393 1.39E-101 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_05135 42250de8dd1800baa751aac9a383f384 340 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 13 219 7.8E-42 T 13-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 ambt_05135 42250de8dd1800baa751aac9a383f384 340 Gene3D G3DSA:3.30.465.10 1 220 3.3E-70 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ambt_05135 42250de8dd1800baa751aac9a383f384 340 SUPERFAMILY SSF56176 1 219 1.91E-54 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ambt_05135 42250de8dd1800baa751aac9a383f384 340 SUPERFAMILY SSF55447 224 323 7.46E-21 T 13-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily ambt_05135 42250de8dd1800baa751aac9a383f384 340 Gene3D G3DSA:3.30.390.50 223 324 1.9E-17 T 13-10-2018 ambt_05135 42250de8dd1800baa751aac9a383f384 340 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 226 321 1.4E-12 T 13-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal ambt_05135 42250de8dd1800baa751aac9a383f384 340 SMART SM01092 225 323 4.5E-17 T 13-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal ambt_05070 9fa257365ad05a3ab6976defc2c1b7a8 439 Gene3D G3DSA:3.90.190.20 301 438 2.7E-29 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_05070 9fa257365ad05a3ab6976defc2c1b7a8 439 Gene3D G3DSA:3.40.1190.10 2 300 1.2E-87 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_05070 9fa257365ad05a3ab6976defc2c1b7a8 439 SUPERFAMILY SSF53244 299 432 2.9E-29 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_05070 9fa257365ad05a3ab6976defc2c1b7a8 439 SUPERFAMILY SSF53623 13 297 2.75E-76 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_05070 9fa257365ad05a3ab6976defc2c1b7a8 439 Pfam PF08245 Mur ligase middle domain 56 202 1.1E-13 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ambt_05070 9fa257365ad05a3ab6976defc2c1b7a8 439 PIRSF PIRSF001563 7 439 2.6E-97 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 ambt_05070 9fa257365ad05a3ab6976defc2c1b7a8 439 TIGRFAM TIGR01499 folC: bifunctional protein FolC 34 432 3.6E-92 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 ambt_15755 f5db34ffe7ac9b7d72e2e9a19508b6ca 313 Gene3D G3DSA:1.10.8.1080 233 311 4.8E-27 T 13-10-2018 ambt_15755 f5db34ffe7ac9b7d72e2e9a19508b6ca 313 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 16 309 41.195 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 ambt_15755 f5db34ffe7ac9b7d72e2e9a19508b6ca 313 Gene3D G3DSA:3.40.50.10490 14 232 1.9E-76 T 13-10-2018 ambt_15755 f5db34ffe7ac9b7d72e2e9a19508b6ca 313 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 199 216 - T 13-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 ambt_15755 f5db34ffe7ac9b7d72e2e9a19508b6ca 313 SUPERFAMILY SSF53697 21 263 5.78E-69 T 13-10-2018 ambt_15755 f5db34ffe7ac9b7d72e2e9a19508b6ca 313 Pfam PF13580 SIS domain 55 178 5.2E-8 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ambt_15755 f5db34ffe7ac9b7d72e2e9a19508b6ca 313 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 21 309 3.8E-120 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 ambt_14810 02799c31672ecff120e183b2fde6ffdc 271 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 6 260 4.5E-85 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 ambt_14810 02799c31672ecff120e183b2fde6ffdc 271 PRINTS PR00114 Serine/threonine phosphatase family signature 103 129 1.8E-6 T 13-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_14810 02799c31672ecff120e183b2fde6ffdc 271 PRINTS PR00114 Serine/threonine phosphatase family signature 35 62 1.8E-6 T 13-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_14810 02799c31672ecff120e183b2fde6ffdc 271 PRINTS PR00114 Serine/threonine phosphatase family signature 5 32 1.8E-6 T 13-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_14810 02799c31672ecff120e183b2fde6ffdc 271 Pfam PF00149 Calcineurin-like phosphoesterase 7 149 1.5E-14 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ambt_14810 02799c31672ecff120e183b2fde6ffdc 271 Gene3D G3DSA:3.60.21.10 5 271 1.1E-69 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like ambt_14810 02799c31672ecff120e183b2fde6ffdc 271 SUPERFAMILY SSF56300 5 258 9.99E-48 T 13-10-2018 ambt_14810 02799c31672ecff120e183b2fde6ffdc 271 PIRSF PIRSF000903 4 271 1.6E-100 T 13-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 ambt_19260 d4590869d4b667411003c72ce7670bb0 230 Pfam PF03352 Methyladenine glycosylase 42 143 5.9E-17 T 13-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 ambt_19260 d4590869d4b667411003c72ce7670bb0 230 SUPERFAMILY SSF48150 39 185 1.44E-38 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ambt_19260 d4590869d4b667411003c72ce7670bb0 230 Gene3D G3DSA:1.10.340.30 35 165 1.1E-19 T 13-10-2018 ambt_22245 ea9771ace6f2b52d08b87b4eb20e353b 119 Pfam PF00825 Ribonuclease P 6 112 8.2E-28 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ambt_22245 ea9771ace6f2b52d08b87b4eb20e353b 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 16.519 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ambt_22245 ea9771ace6f2b52d08b87b4eb20e353b 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 38 107 3.0E-23 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ambt_22245 ea9771ace6f2b52d08b87b4eb20e353b 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 4.6E-26 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ambt_22245 ea9771ace6f2b52d08b87b4eb20e353b 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 13-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 ambt_22245 ea9771ace6f2b52d08b87b4eb20e353b 119 SUPERFAMILY SSF54211 6 115 7.08E-28 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_22245 ea9771ace6f2b52d08b87b4eb20e353b 119 Gene3D G3DSA:3.30.230.10 2 119 1.7E-37 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_09040 be22f11cbf19112340acd208477a9fb8 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 248 1.7E-51 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ambt_09040 be22f11cbf19112340acd208477a9fb8 254 SUPERFAMILY SSF52096 2 247 7.0E-68 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_09040 be22f11cbf19112340acd208477a9fb8 254 Gene3D G3DSA:3.90.226.10 1 196 3.3E-58 T 13-10-2018 ambt_09040 be22f11cbf19112340acd208477a9fb8 254 Gene3D G3DSA:1.10.12.10 197 251 8.6E-7 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ambt_16595 d45a3dfadca1fd862d1be56377d0462a 296 Gene3D G3DSA:1.10.10.10 4 88 8.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_16595 d45a3dfadca1fd862d1be56377d0462a 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 62 5.2E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_16595 d45a3dfadca1fd862d1be56377d0462a 296 Pfam PF03466 LysR substrate binding domain 90 286 2.4E-37 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_16595 d45a3dfadca1fd862d1be56377d0462a 296 Gene3D G3DSA:3.40.190.290 91 289 3.1E-58 T 13-10-2018 ambt_16595 d45a3dfadca1fd862d1be56377d0462a 296 SUPERFAMILY SSF46785 6 83 5.45E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_16595 d45a3dfadca1fd862d1be56377d0462a 296 SUPERFAMILY SSF53850 90 291 1.59E-39 T 13-10-2018 ambt_00180 1e0513fc26152f1b215e2f918516148e 171 Gene3D G3DSA:1.10.238.10 2 102 2.0E-6 T 13-10-2018 ambt_00180 1e0513fc26152f1b215e2f918516148e 171 Gene3D G3DSA:1.10.238.10 108 169 7.3E-9 T 13-10-2018 ambt_00180 1e0513fc26152f1b215e2f918516148e 171 SUPERFAMILY SSF47473 25 166 2.46E-14 T 13-10-2018 IPR011992 EF-hand domain pair ambt_00180 1e0513fc26152f1b215e2f918516148e 171 Pfam PF13202 EF hand 120 136 0.13 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 ambt_00180 1e0513fc26152f1b215e2f918516148e 171 Pfam PF13202 EF hand 145 162 8.6E-4 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 ambt_00180 1e0513fc26152f1b215e2f918516148e 171 ProSitePatterns PS00018 EF-hand calcium-binding domain. 149 161 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_13005 b7e77653210377ccaedce354ee8271ec 518 Pfam PF00158 Sigma-54 interaction domain 207 371 7.5E-60 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ambt_13005 b7e77653210377ccaedce354ee8271ec 518 SUPERFAMILY SSF55021 2 68 2.09E-6 T 13-10-2018 ambt_13005 b7e77653210377ccaedce354ee8271ec 518 SUPERFAMILY SSF52540 208 447 9.29E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13005 b7e77653210377ccaedce354ee8271ec 518 Gene3D G3DSA:3.30.450.20 82 190 2.4E-21 T 13-10-2018 ambt_13005 b7e77653210377ccaedce354ee8271ec 518 SUPERFAMILY SSF46689 456 512 1.48E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_13005 b7e77653210377ccaedce354ee8271ec 518 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 7.6E-27 T 13-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 ambt_13005 b7e77653210377ccaedce354ee8271ec 518 Gene3D G3DSA:1.10.8.60 377 452 4.9E-22 T 13-10-2018 ambt_13005 b7e77653210377ccaedce354ee8271ec 518 Pfam PF00989 PAS fold 81 128 9.6E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 ambt_13005 b7e77653210377ccaedce354ee8271ec 518 Gene3D G3DSA:3.40.50.300 193 376 6.0E-61 T 13-10-2018 ambt_13005 b7e77653210377ccaedce354ee8271ec 518 Gene3D G3DSA:3.30.70.260 1 80 6.0E-28 T 13-10-2018 ambt_13005 b7e77653210377ccaedce354ee8271ec 518 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 418 427 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ambt_13005 b7e77653210377ccaedce354ee8271ec 518 SMART SM00091 80 146 1.9E-5 T 13-10-2018 IPR000014 PAS domain ambt_13005 b7e77653210377ccaedce354ee8271ec 518 SUPERFAMILY SSF55785 80 143 2.47E-6 T 13-10-2018 IPR035965 PAS domain superfamily ambt_13005 b7e77653210377ccaedce354ee8271ec 518 SMART SM00382 226 369 3.9E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13005 b7e77653210377ccaedce354ee8271ec 518 Gene3D G3DSA:1.10.10.60 454 513 5.8E-26 T 13-10-2018 ambt_13005 b7e77653210377ccaedce354ee8271ec 518 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 Gene3D G3DSA:3.40.190.10 189 274 1.0E-49 T 13-10-2018 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 SUPERFAMILY SSF48600 5 91 2.01E-22 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 PIRSF PIRSF001500 1 380 1.8E-126 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 Pfam PF01817 Chorismate mutase type II 10 87 6.5E-18 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 88 1.3E-24 T 13-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 Gene3D G3DSA:3.30.70.260 291 379 5.7E-27 T 13-10-2018 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 SMART SM00830 10 90 2.7E-26 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 Gene3D G3DSA:3.40.190.10 109 283 1.0E-49 T 13-10-2018 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 SUPERFAMILY SSF53850 105 290 7.71E-51 T 13-10-2018 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 Pfam PF00800 Prephenate dehydratase 106 286 5.3E-56 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 Gene3D G3DSA:1.20.59.10 1 108 6.4E-32 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ambt_12200 10ee281469225ef7e5d0ad195711a82b 393 SUPERFAMILY SSF55021 280 377 1.37E-26 T 13-10-2018 ambt_01685 11bac0e588ba70132706186edae658b4 471 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.0E-34 T 13-10-2018 ambt_01685 11bac0e588ba70132706186edae658b4 471 PRINTS PR00419 Adrenodoxin reductase family signature 289 303 3.0E-34 T 13-10-2018 ambt_01685 11bac0e588ba70132706186edae658b4 471 PRINTS PR00419 Adrenodoxin reductase family signature 323 336 3.0E-34 T 13-10-2018 ambt_01685 11bac0e588ba70132706186edae658b4 471 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.0E-34 T 13-10-2018 ambt_01685 11bac0e588ba70132706186edae658b4 471 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.0E-34 T 13-10-2018 ambt_01685 11bac0e588ba70132706186edae658b4 471 Gene3D G3DSA:1.10.1060.10 12 146 1.9E-33 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ambt_01685 11bac0e588ba70132706186edae658b4 471 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 471 1.2E-242 T 13-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 ambt_01685 11bac0e588ba70132706186edae658b4 471 Gene3D G3DSA:3.50.50.60 248 399 9.6E-41 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_01685 11bac0e588ba70132706186edae658b4 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 458 1.3E-21 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ambt_01685 11bac0e588ba70132706186edae658b4 471 SUPERFAMILY SSF51971 145 400 1.77E-64 T 13-10-2018 ambt_01685 11bac0e588ba70132706186edae658b4 471 Gene3D G3DSA:3.50.50.60 147 240 7.7E-10 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_01685 11bac0e588ba70132706186edae658b4 471 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 134 2.0E-37 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 ambt_01685 11bac0e588ba70132706186edae658b4 471 SUPERFAMILY SSF46548 6 157 2.72E-41 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ambt_12095 ff0d4167ab8ade2ce9cc7b90a0c27d51 259 SUPERFAMILY SSF74653 173 257 5.1E-19 T 13-10-2018 ambt_12095 ff0d4167ab8ade2ce9cc7b90a0c27d51 259 TIGRFAM TIGR02794 tolA_full: protein TolA 51 258 1.5E-37 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 ambt_12095 ff0d4167ab8ade2ce9cc7b90a0c27d51 259 Pfam PF06519 TolA C-terminal 163 257 9.0E-31 T 13-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 ambt_12095 ff0d4167ab8ade2ce9cc7b90a0c27d51 259 Gene3D G3DSA:3.30.1150.10 161 258 1.4E-27 T 13-10-2018 ambt_15370 34c6511f87ef6b8d36fd484cb4eaec0e 444 SUPERFAMILY SSF103473 11 434 3.4E-30 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_15370 34c6511f87ef6b8d36fd484cb4eaec0e 444 Gene3D G3DSA:1.20.1250.20 7 203 3.8E-13 T 13-10-2018 ambt_15370 34c6511f87ef6b8d36fd484cb4eaec0e 444 Gene3D G3DSA:1.20.1250.20 243 436 6.6E-9 T 13-10-2018 ambt_15370 34c6511f87ef6b8d36fd484cb4eaec0e 444 Pfam PF07690 Major Facilitator Superfamily 16 282 8.0E-14 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_19355 9c60e1b8a7f1036892b8887931366187 734 SMART SM00487 191 387 5.5E-15 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_19355 9c60e1b8a7f1036892b8887931366187 734 Gene3D G3DSA:3.40.50.300 186 372 2.6E-72 T 13-10-2018 ambt_19355 9c60e1b8a7f1036892b8887931366187 734 Pfam PF00270 DEAD/DEAH box helicase 217 360 6.7E-12 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_19355 9c60e1b8a7f1036892b8887931366187 734 TIGRFAM TIGR00595 priA: primosomal protein N' 217 730 6.7E-177 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ambt_19355 9c60e1b8a7f1036892b8887931366187 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 733 23.375 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ambt_19355 9c60e1b8a7f1036892b8887931366187 734 SUPERFAMILY SSF52540 215 596 3.15E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19355 9c60e1b8a7f1036892b8887931366187 734 SMART SM00490 488 585 1.1E-8 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_19355 9c60e1b8a7f1036892b8887931366187 734 Gene3D G3DSA:1.10.8.630 2 108 9.1E-31 T 13-10-2018 ambt_19355 9c60e1b8a7f1036892b8887931366187 734 Pfam PF00271 Helicase conserved C-terminal domain 513 584 1.7E-6 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_11005 2c0e9c38ec444a0d9ee788044a17bece 357 PIRSF PIRSF009283 1 356 3.8E-110 T 13-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 ambt_11005 2c0e9c38ec444a0d9ee788044a17bece 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 160 276 1.9E-18 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ambt_11005 2c0e9c38ec444a0d9ee788044a17bece 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 13 355 5.5E-118 T 13-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 ambt_11005 2c0e9c38ec444a0d9ee788044a17bece 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 5 142 2.1E-65 T 13-10-2018 ambt_11005 2c0e9c38ec444a0d9ee788044a17bece 357 SUPERFAMILY SSF54593 5 342 9.07E-81 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_11005 2c0e9c38ec444a0d9ee788044a17bece 357 Gene3D G3DSA:3.10.180.10 2 154 4.5E-47 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_11005 2c0e9c38ec444a0d9ee788044a17bece 357 Gene3D G3DSA:3.10.180.10 155 356 3.8E-68 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_12925 bebd60e2cd02ac1ce7db9c2ea0d0024b 174 Pfam PF01618 MotA/TolQ/ExbB proton channel family 63 161 7.8E-22 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ambt_17185 0c8f2b3e0c70993c5d6fa39af519f5d6 207 Gene3D G3DSA:3.30.700.10 15 142 1.2E-13 T 13-10-2018 ambt_17185 0c8f2b3e0c70993c5d6fa39af519f5d6 207 SUPERFAMILY SSF54523 15 108 4.08E-13 T 13-10-2018 ambt_17185 0c8f2b3e0c70993c5d6fa39af519f5d6 207 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 34 2.7E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_17185 0c8f2b3e0c70993c5d6fa39af519f5d6 207 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 3.2E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04180 d370c0ead6448f0652e3cb9dee7bf07c 155 Gene3D G3DSA:3.30.700.10 11 152 1.3E-21 T 13-10-2018 ambt_04180 d370c0ead6448f0652e3cb9dee7bf07c 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 2.3E-9 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ambt_04180 d370c0ead6448f0652e3cb9dee7bf07c 155 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 2.3E-9 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ambt_04180 d370c0ead6448f0652e3cb9dee7bf07c 155 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 32 123 7.1E-14 T 13-10-2018 IPR031982 Type IV minor pilin ComP ambt_04180 d370c0ead6448f0652e3cb9dee7bf07c 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 1.3E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04180 d370c0ead6448f0652e3cb9dee7bf07c 155 SUPERFAMILY SSF54523 11 138 9.42E-21 T 13-10-2018 ambt_04180 d370c0ead6448f0652e3cb9dee7bf07c 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04180 d370c0ead6448f0652e3cb9dee7bf07c 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 7.0E-10 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SMART SM00086 454 496 0.077 T 13-10-2018 IPR001610 PAC motif ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SMART SM00086 332 374 9.4E-6 T 13-10-2018 IPR001610 PAC motif ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SMART SM00086 210 252 0.32 T 13-10-2018 IPR001610 PAC motif ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 Pfam PF13426 PAS domain 150 251 1.0E-13 T 13-10-2018 IPR000014 PAS domain ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 Pfam PF13188 PAS domain 24 53 6.4E-4 T 13-10-2018 IPR000014 PAS domain ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SUPERFAMILY SSF55785 145 249 3.14E-24 T 13-10-2018 IPR035965 PAS domain superfamily ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 376 8.4E-17 T 13-10-2018 IPR000014 PAS domain ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 388 497 7.1E-13 T 13-10-2018 IPR000014 PAS domain ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 142 256 1.1E-17 T 13-10-2018 IPR000014 PAS domain ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 Gene3D G3DSA:3.30.450.20 260 390 4.7E-22 T 13-10-2018 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 Gene3D G3DSA:3.30.450.20 130 259 9.1E-24 T 13-10-2018 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SUPERFAMILY SSF55785 270 371 7.33E-25 T 13-10-2018 IPR035965 PAS domain superfamily ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 Pfam PF08447 PAS fold 282 367 1.6E-14 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 Pfam PF08447 PAS fold 404 489 1.0E-11 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 Gene3D G3DSA:1.10.287.950 497 796 1.2E-86 T 13-10-2018 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 674 703 1.1E-55 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 568 597 1.1E-55 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 722 751 1.1E-55 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 645 672 1.1E-55 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 Gene3D G3DSA:3.30.450.20 391 494 4.5E-21 T 13-10-2018 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 Gene3D G3DSA:3.30.450.20 18 129 9.2E-10 T 13-10-2018 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SUPERFAMILY SSF58104 514 796 6.15E-75 T 13-10-2018 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SUPERFAMILY SSF55785 392 493 1.47E-23 T 13-10-2018 IPR035965 PAS domain superfamily ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 607 762 1.3E-53 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SMART SM00091 257 327 0.46 T 13-10-2018 IPR000014 PAS domain ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SMART SM00091 135 204 0.93 T 13-10-2018 IPR000014 PAS domain ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SMART SM00091 20 88 8.2 T 13-10-2018 IPR000014 PAS domain ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SMART SM00091 380 449 0.81 T 13-10-2018 IPR000014 PAS domain ambt_16735 ce783dda11e8fe1da8586686d90b4b62 846 SMART SM00283 547 794 6.2E-92 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_14050 9a19f1e360f494583d3af8624b011c87 379 SMART SM00729 5 221 8.4E-48 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ambt_14050 9a19f1e360f494583d3af8624b011c87 379 SUPERFAMILY SSF102114 2 378 1.03E-110 T 13-10-2018 ambt_14050 9a19f1e360f494583d3af8624b011c87 379 Pfam PF04055 Radical SAM superfamily 10 175 6.7E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_14050 9a19f1e360f494583d3af8624b011c87 379 Pfam PF06969 HemN C-terminal domain 305 368 9.6E-15 T 13-10-2018 IPR010723 HemN, C-terminal ambt_14050 9a19f1e360f494583d3af8624b011c87 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 6 370 1.1E-125 T 13-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 ambt_14050 9a19f1e360f494583d3af8624b011c87 379 Gene3D G3DSA:3.80.30.20 1 291 4.6E-97 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ambt_09535 e412f7136c218f56dabf11efeaa4a705 105 Gene3D G3DSA:3.30.460.10 1 105 2.3E-36 T 13-10-2018 ambt_09535 e412f7136c218f56dabf11efeaa4a705 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.8E-37 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ambt_09535 e412f7136c218f56dabf11efeaa4a705 105 SUPERFAMILY SSF81301 2 105 2.45E-37 T 13-10-2018 ambt_09535 e412f7136c218f56dabf11efeaa4a705 105 Pfam PF02410 Ribosomal silencing factor during starvation 13 104 4.5E-26 T 13-10-2018 ambt_09535 e412f7136c218f56dabf11efeaa4a705 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.282 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ambt_01730 0c5e08a6fe19b0fc8c099360633e94c9 291 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 1 288 49.402 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ambt_01730 0c5e08a6fe19b0fc8c099360633e94c9 291 SUPERFAMILY SSF51621 4 285 1.53E-101 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ambt_01730 0c5e08a6fe19b0fc8c099360633e94c9 291 ProSitePatterns PS00161 Isocitrate lyase signature. 117 122 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 ambt_01730 0c5e08a6fe19b0fc8c099360633e94c9 291 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 4 287 3.6E-128 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ambt_01730 0c5e08a6fe19b0fc8c099360633e94c9 291 Pfam PF13714 Phosphoenolpyruvate phosphomutase 7 251 7.3E-52 T 13-10-2018 ambt_01730 0c5e08a6fe19b0fc8c099360633e94c9 291 Gene3D G3DSA:3.20.20.60 1 291 9.4E-107 T 13-10-2018 ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 SMART SM00387 267 373 1.3E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 271 370 9.3E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 SUPERFAMILY SSF55785 45 135 9.33E-10 T 13-10-2018 IPR035965 PAS domain superfamily ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 SUPERFAMILY SSF47384 151 222 3.92E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 Gene3D G3DSA:3.30.450.20 40 144 7.9E-8 T 13-10-2018 ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 Gene3D G3DSA:3.30.565.10 227 381 1.3E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 SMART SM00388 157 223 1.9E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 Pfam PF13188 PAS domain 51 106 2.7E-5 T 13-10-2018 IPR000014 PAS domain ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 Pfam PF00512 His Kinase A (phospho-acceptor) domain 157 222 1.8E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 SUPERFAMILY SSF55874 212 371 3.01E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 332 2.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 370 2.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 318 2.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 351 2.1E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_13305 597d0792e4a6b0f96bad0e4e0f97e04c 387 Gene3D G3DSA:1.10.287.130 145 220 4.2E-13 T 13-10-2018 ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 1.8E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.8E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.8E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 1.8E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 SMART SM00387 316 428 6.5E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 Gene3D G3DSA:3.30.565.10 273 430 3.8E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 270 5.9E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 SUPERFAMILY SSF55874 260 424 1.01E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 427 2.3E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 2.0E-27 T 13-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 423 1.1E-136 T 13-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 SUPERFAMILY SSF47384 192 270 1.33E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 Gene3D G3DSA:1.10.287.130 199 271 1.4E-23 T 13-10-2018 ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 SUPERFAMILY SSF55785 90 197 8.37E-8 T 13-10-2018 IPR035965 PAS domain superfamily ambt_14925 b5305cc3f2183d22976d3f7e82dc88ca 433 SMART SM00388 205 271 2.4E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_14615 969738cad7184237246d437ac32a8ae0 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain ambt_14615 969738cad7184237246d437ac32a8ae0 147 SUPERFAMILY SSF55804 1 146 6.93E-36 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ambt_14615 969738cad7184237246d437ac32a8ae0 147 Gene3D G3DSA:3.40.930.10 1 147 1.5E-47 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ambt_14615 969738cad7184237246d437ac32a8ae0 147 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 5 143 5.6E-44 T 13-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 ambt_14615 969738cad7184237246d437ac32a8ae0 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 146 1.5E-33 T 13-10-2018 IPR002178 PTS EIIA type-2 domain ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 2.9E-5 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.986 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 Gene3D G3DSA:1.10.1670.10 11 203 3.0E-76 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 SMART SM00525 186 206 1.5E-5 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 SMART SM00478 38 185 1.3E-55 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 Gene3D G3DSA:1.10.340.30 21 132 3.0E-76 T 13-10-2018 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.0E-87 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 Pfam PF00633 Helix-hairpin-helix motif 99 127 5.6E-9 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 PIRSF PIRSF001435 1 211 3.0E-49 T 13-10-2018 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 2.3E-19 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 SUPERFAMILY SSF48150 3 208 5.65E-72 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ambt_12540 29d506aa7f63ceedb3e564dcc2220652 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 ambt_21580 6090cacdf150a69547b19827cf8d70b6 423 Pfam PF13175 AAA ATPase domain 4 124 3.9E-9 T 13-10-2018 ambt_21580 6090cacdf150a69547b19827cf8d70b6 423 Pfam PF13175 AAA ATPase domain 197 349 2.3E-13 T 13-10-2018 ambt_21580 6090cacdf150a69547b19827cf8d70b6 423 Gene3D G3DSA:3.40.50.300 210 364 2.7E-5 T 13-10-2018 ambt_21580 6090cacdf150a69547b19827cf8d70b6 423 SUPERFAMILY SSF52540 4 353 1.12E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_21580 6090cacdf150a69547b19827cf8d70b6 423 Pfam PF12476 Protein of unknown function (DUF3696) 364 411 4.8E-9 T 13-10-2018 IPR022532 Domain of unknown function DUF3696, C-terminal ambt_21580 6090cacdf150a69547b19827cf8d70b6 423 Gene3D G3DSA:3.40.50.300 3 184 2.0E-7 T 13-10-2018 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 Gene3D G3DSA:1.25.40.10 156 367 2.9E-32 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 Pfam PF13424 Tetratricopeptide repeat 196 265 7.4E-9 T 13-10-2018 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 Pfam PF13424 Tetratricopeptide repeat 276 342 1.5E-9 T 13-10-2018 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 SUPERFAMILY SSF48452 33 174 2.75E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 Gene3D G3DSA:1.25.40.10 55 143 7.2E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 SUPERFAMILY SSF48452 196 349 3.67E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 SMART SM00028 154 187 450.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 SMART SM00028 276 309 4.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 SMART SM00028 74 107 58.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 SMART SM00028 236 269 9.8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 SMART SM00028 316 349 0.72 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_03105 7ffcbf44f0184b7ae53874aad6c05601 377 SMART SM00028 196 229 0.0038 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_14035 95df7dbf9482a8b51425f0578be9e44b 392 Hamap MF_01262 CCA-adding enzyme [cca]. 1 389 40.662 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 ambt_14035 95df7dbf9482a8b51425f0578be9e44b 392 SUPERFAMILY SSF81891 120 387 5.76E-40 T 13-10-2018 ambt_14035 95df7dbf9482a8b51425f0578be9e44b 392 Gene3D G3DSA:1.10.3090.10 122 391 1.5E-42 T 13-10-2018 ambt_14035 95df7dbf9482a8b51425f0578be9e44b 392 Pfam PF01743 Poly A polymerase head domain 3 122 6.8E-20 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ambt_14035 95df7dbf9482a8b51425f0578be9e44b 392 Gene3D G3DSA:3.30.460.10 1 121 1.9E-30 T 13-10-2018 ambt_14035 95df7dbf9482a8b51425f0578be9e44b 392 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 210 4.5E-10 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ambt_14035 95df7dbf9482a8b51425f0578be9e44b 392 SUPERFAMILY SSF81301 1 119 1.96E-30 T 13-10-2018 ambt_14035 95df7dbf9482a8b51425f0578be9e44b 392 PIRSF PIRSF000813 1 392 5.0E-140 T 13-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 ambt_00230 356f72b41fe24069f58a9fb285c24232 254 Gene3D G3DSA:2.40.180.10 23 249 2.7E-102 T 13-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ambt_00230 356f72b41fe24069f58a9fb285c24232 254 SUPERFAMILY SSF56634 22 248 2.75E-103 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00230 356f72b41fe24069f58a9fb285c24232 254 SMART SM01060 30 254 7.2E-73 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00230 356f72b41fe24069f58a9fb285c24232 254 Pfam PF00199 Catalase 30 247 3.9E-99 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00230 356f72b41fe24069f58a9fb285c24232 254 PRINTS PR00067 Catalase signature 146 164 5.3E-40 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00230 356f72b41fe24069f58a9fb285c24232 254 PRINTS PR00067 Catalase signature 106 124 5.3E-40 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00230 356f72b41fe24069f58a9fb285c24232 254 PRINTS PR00067 Catalase signature 127 144 5.3E-40 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00230 356f72b41fe24069f58a9fb285c24232 254 PRINTS PR00067 Catalase signature 43 66 5.3E-40 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_04340 41a75f57f6086bda1bdf05c31c9827c8 342 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 14 331 34.579 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 ambt_04340 41a75f57f6086bda1bdf05c31c9827c8 342 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 132 166 7.8E-10 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_04340 41a75f57f6086bda1bdf05c31c9827c8 342 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 28 94 3.9E-21 T 13-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 ambt_04340 41a75f57f6086bda1bdf05c31c9827c8 342 Gene3D G3DSA:3.40.1390.10 3 103 7.6E-30 T 13-10-2018 ambt_04340 41a75f57f6086bda1bdf05c31c9827c8 342 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 13 334 1.0E-110 T 13-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 ambt_04340 41a75f57f6086bda1bdf05c31c9827c8 342 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 111 139 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ambt_04340 41a75f57f6086bda1bdf05c31c9827c8 342 SUPERFAMILY SSF51161 40 323 4.15E-82 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_04340 41a75f57f6086bda1bdf05c31c9827c8 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 227 260 1.4E-6 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_04340 41a75f57f6086bda1bdf05c31c9827c8 342 Gene3D G3DSA:2.160.10.10 105 314 1.2E-61 T 13-10-2018 ambt_01500 25c27a911e5c2528b6899a6249f755d8 381 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 380 1.6E-102 T 13-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 ambt_01500 25c27a911e5c2528b6899a6249f755d8 381 Gene3D G3DSA:3.90.1150.10 13 379 5.4E-119 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_01500 25c27a911e5c2528b6899a6249f755d8 381 SUPERFAMILY SSF53383 5 381 3.46E-83 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_01500 25c27a911e5c2528b6899a6249f755d8 381 Gene3D G3DSA:3.40.640.10 66 293 5.4E-119 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_01500 25c27a911e5c2528b6899a6249f755d8 381 Pfam PF00155 Aminotransferase class I and II 52 379 5.7E-35 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ambt_04905 b02ba69a826489ac13cf1fa83dd6d3ff 226 Gene3D G3DSA:1.20.910.10 2 219 4.3E-57 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ambt_04905 b02ba69a826489ac13cf1fa83dd6d3ff 226 SUPERFAMILY SSF48613 2 214 3.56E-61 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ambt_04905 b02ba69a826489ac13cf1fa83dd6d3ff 226 Pfam PF14518 Iron-containing redox enzyme 39 206 2.0E-27 T 13-10-2018 ambt_04905 b02ba69a826489ac13cf1fa83dd6d3ff 226 SMART SM01236 73 170 4.8E-8 T 13-10-2018 ambt_13010 d3c570395aa3c79f6525d9cc00b84c65 267 Gene3D G3DSA:1.10.800.10 1 267 1.3E-93 T 13-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 ambt_13010 d3c570395aa3c79f6525d9cc00b84c65 267 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 118 129 - T 13-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 ambt_13010 d3c570395aa3c79f6525d9cc00b84c65 267 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 75 97 4.6E-10 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ambt_13010 d3c570395aa3c79f6525d9cc00b84c65 267 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 214 233 4.6E-10 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ambt_13010 d3c570395aa3c79f6525d9cc00b84c65 267 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 139 158 4.6E-10 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ambt_13010 d3c570395aa3c79f6525d9cc00b84c65 267 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 182 200 4.6E-10 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ambt_13010 d3c570395aa3c79f6525d9cc00b84c65 267 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 14 257 5.1E-96 T 13-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 ambt_13010 d3c570395aa3c79f6525d9cc00b84c65 267 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 10 234 1.3E-45 T 13-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ambt_13010 d3c570395aa3c79f6525d9cc00b84c65 267 SUPERFAMILY SSF56534 7 251 1.7E-93 T 13-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily ambt_01745 3256a937d38e165f84ca21dba9ebdc81 201 Gene3D G3DSA:3.40.50.2300 1 135 1.3E-30 T 13-10-2018 ambt_01745 3256a937d38e165f84ca21dba9ebdc81 201 Pfam PF00072 Response regulator receiver domain 4 115 5.5E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01745 3256a937d38e165f84ca21dba9ebdc81 201 Gene3D G3DSA:1.10.10.10 136 201 2.0E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_01745 3256a937d38e165f84ca21dba9ebdc81 201 SMART SM00448 2 116 5.8E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01745 3256a937d38e165f84ca21dba9ebdc81 201 SUPERFAMILY SSF46894 126 201 1.16E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_01745 3256a937d38e165f84ca21dba9ebdc81 201 SMART SM00421 138 195 5.0E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01745 3256a937d38e165f84ca21dba9ebdc81 201 SUPERFAMILY SSF52172 1 130 1.99E-28 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01745 3256a937d38e165f84ca21dba9ebdc81 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 5.5E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01745 3256a937d38e165f84ca21dba9ebdc81 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 5.5E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01745 3256a937d38e165f84ca21dba9ebdc81 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 5.5E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01745 3256a937d38e165f84ca21dba9ebdc81 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 5.0E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_04155 5f3fd5113e9d3a2430d198bc995e5ea4 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 1.5E-98 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ambt_04155 5f3fd5113e9d3a2430d198bc995e5ea4 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 37.084 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ambt_04155 5f3fd5113e9d3a2430d198bc995e5ea4 314 Pfam PF02401 LytB protein 3 283 8.7E-92 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ambt_04155 5f3fd5113e9d3a2430d198bc995e5ea4 314 Gene3D G3DSA:3.40.1010.20 97 196 7.5E-111 T 13-10-2018 ambt_04155 5f3fd5113e9d3a2430d198bc995e5ea4 314 Gene3D G3DSA:3.40.1010.20 6 282 7.5E-111 T 13-10-2018 ambt_04155 5f3fd5113e9d3a2430d198bc995e5ea4 314 Gene3D G3DSA:3.40.50.11270 12 96 7.5E-111 T 13-10-2018 ambt_21290 3dd23bf587d57c0d9fa59314daa6adf6 186 Gene3D G3DSA:1.10.357.10 3 186 1.6E-25 T 13-10-2018 ambt_21290 3dd23bf587d57c0d9fa59314daa6adf6 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.0E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_21290 3dd23bf587d57c0d9fa59314daa6adf6 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.0E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_21290 3dd23bf587d57c0d9fa59314daa6adf6 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.5E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_21290 3dd23bf587d57c0d9fa59314daa6adf6 186 SUPERFAMILY SSF46689 6 73 2.26E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_21290 3dd23bf587d57c0d9fa59314daa6adf6 186 SUPERFAMILY SSF48498 101 185 7.34E-5 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ambt_19255 1a81623360c29853448ef1206af837aa 261 Gene3D G3DSA:3.40.50.150 41 261 6.8E-76 T 13-10-2018 ambt_19255 1a81623360c29853448ef1206af837aa 261 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 26 260 39.276 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ambt_19255 1a81623360c29853448ef1206af837aa 261 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 35 260 5.1E-87 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ambt_19255 1a81623360c29853448ef1206af837aa 261 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 46 61 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ambt_19255 1a81623360c29853448ef1206af837aa 261 Pfam PF01209 ubiE/COQ5 methyltransferase family 27 260 2.5E-101 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ambt_19255 1a81623360c29853448ef1206af837aa 261 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 168 182 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ambt_19255 1a81623360c29853448ef1206af837aa 261 SUPERFAMILY SSF53335 29 259 2.19E-50 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 Gene3D G3DSA:1.20.120.330 826 959 7.1E-39 T 13-10-2018 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 SUPERFAMILY SSF81301 535 826 4.32E-80 T 13-10-2018 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 Pfam PF08335 GlnD PII-uridylyltransferase 303 441 1.6E-39 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 Pfam PF08335 GlnD PII-uridylyltransferase 841 942 2.7E-11 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 Gene3D G3DSA:1.10.4050.10 8 116 1.8E-7 T 13-10-2018 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 SUPERFAMILY SSF81593 829 958 5.41E-27 T 13-10-2018 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 562 818 4.0E-79 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 37 279 1.9E-77 T 13-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 Gene3D G3DSA:3.30.460.10 118 290 5.5E-62 T 13-10-2018 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 Gene3D G3DSA:1.20.120.330 291 446 2.3E-49 T 13-10-2018 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 SUPERFAMILY SSF81301 36 292 1.09E-73 T 13-10-2018 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 Gene3D G3DSA:3.30.460.100 572 825 3.4E-82 T 13-10-2018 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 Gene3D G3DSA:1.20.120.1510 457 570 9.7E-26 T 13-10-2018 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 SUPERFAMILY SSF81593 293 442 2.28E-38 T 13-10-2018 ambt_03525 1f6185c8f18484420ff8f9a3288d5bd3 963 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 34 959 18.002 T 13-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 ambt_11725 f87ef5d7bca4f93863fc802e905ac36b 218 SUPERFAMILY SSF52266 36 212 2.44E-44 T 13-10-2018 ambt_11725 f87ef5d7bca4f93863fc802e905ac36b 218 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 40 198 2.8E-19 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain ambt_11725 f87ef5d7bca4f93863fc802e905ac36b 218 Gene3D G3DSA:3.40.50.1110 34 217 2.1E-62 T 13-10-2018 IPR036514 SGNH hydrolase superfamily ambt_06035 091f0559fe8e34e38f944016bf28a293 435 Pfam PF00753 Metallo-beta-lactamase superfamily 5 154 9.2E-15 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_06035 091f0559fe8e34e38f944016bf28a293 435 SMART SM00849 1 195 2.5E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_06035 091f0559fe8e34e38f944016bf28a293 435 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 355 404 2.4E-7 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ambt_06035 091f0559fe8e34e38f944016bf28a293 435 Gene3D G3DSA:3.60.15.10 1 430 1.7E-141 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_06035 091f0559fe8e34e38f944016bf28a293 435 Gene3D G3DSA:3.40.50.10710 198 347 1.7E-141 T 13-10-2018 ambt_06035 091f0559fe8e34e38f944016bf28a293 435 SUPERFAMILY SSF56281 2 414 2.63E-72 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.2E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 2.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 Gene3D G3DSA:3.40.50.720 1 255 3.3E-74 T 13-10-2018 ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 253 5.1E-52 T 13-10-2018 ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 3 254 3.7E-103 T 13-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_11555 fee0e3d459ad1a88787150e8db4d9eec 255 SUPERFAMILY SSF51735 3 254 4.9E-72 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_20540 0661664c7adee8760d60d0bf1e34d765 264 Pfam PF08220 DeoR-like helix-turn-helix domain 15 66 2.4E-14 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ambt_20540 0661664c7adee8760d60d0bf1e34d765 264 ProSitePatterns PS00894 DeoR-type HTH domain signature. 15 49 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ambt_20540 0661664c7adee8760d60d0bf1e34d765 264 SUPERFAMILY SSF46785 12 73 1.29E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_20540 0661664c7adee8760d60d0bf1e34d765 264 Pfam PF00455 DeoR C terminal sensor domain 85 239 1.7E-39 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain ambt_20540 0661664c7adee8760d60d0bf1e34d765 264 SMART SM00420 15 67 2.7E-13 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ambt_20540 0661664c7adee8760d60d0bf1e34d765 264 SMART SM01134 79 240 1.6E-49 T 13-10-2018 ambt_20540 0661664c7adee8760d60d0bf1e34d765 264 SUPERFAMILY SSF100950 83 240 1.99E-26 T 13-10-2018 IPR037171 NagB/RpiA transferase-like ambt_18550 b4fbc26d026b418a70a30fbb8d9cfb22 697 Gene3D G3DSA:2.170.130.10 41 166 4.4E-29 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_18550 b4fbc26d026b418a70a30fbb8d9cfb22 697 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 697 1.5E-82 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ambt_18550 b4fbc26d026b418a70a30fbb8d9cfb22 697 Pfam PF00593 TonB dependent receptor 236 695 2.4E-32 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_18550 b4fbc26d026b418a70a30fbb8d9cfb22 697 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 159 2.4E-11 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_18550 b4fbc26d026b418a70a30fbb8d9cfb22 697 Gene3D G3DSA:2.40.170.20 167 697 3.6E-129 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_18550 b4fbc26d026b418a70a30fbb8d9cfb22 697 SUPERFAMILY SSF56935 33 697 8.24E-111 T 13-10-2018 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 SUPERFAMILY SSF48334 258 554 4.05E-90 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 Pfam PF05190 MutS family domain IV 417 506 7.9E-32 T 13-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 Gene3D G3DSA:1.10.1420.10 257 548 1.4E-104 T 13-10-2018 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 SMART SM00533 274 580 4.4E-99 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 677 693 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 Pfam PF05188 MutS domain II 119 244 1.4E-29 T 13-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 Gene3D G3DSA:3.40.50.300 558 846 9.8E-100 T 13-10-2018 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 PIRSF PIRSF037677 1 837 3.5E-151 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 SUPERFAMILY SSF55271 1 106 1.57E-39 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 Pfam PF00488 MutS domain V 599 786 6.3E-87 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 Pfam PF05192 MutS domain III 260 548 5.5E-41 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 Pfam PF01624 MutS domain I 1 110 1.8E-40 T 13-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 Gene3D G3DSA:3.30.420.110 118 252 4.5E-39 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 SMART SM00534 596 783 7.0E-119 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 SUPERFAMILY SSF52540 556 787 2.44E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 Gene3D G3DSA:1.10.1420.10 376 492 1.4E-104 T 13-10-2018 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 801 0.0 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 Gene3D G3DSA:3.40.1170.10 1 112 2.0E-48 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 867 24.742 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 ambt_13970 1e5401614aa92d63aa9250725abc1b49 877 SUPERFAMILY SSF53150 105 257 3.27E-43 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 ambt_04260 4215e35551673aeb2764953312d6952b 199 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 4 77 6.4E-27 T 13-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 ambt_04260 4215e35551673aeb2764953312d6952b 199 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 129 179 3.1E-6 T 13-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal ambt_04260 4215e35551673aeb2764953312d6952b 199 SUPERFAMILY SSF89069 4 68 9.02E-20 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 ambt_04260 4215e35551673aeb2764953312d6952b 199 Gene3D G3DSA:1.10.10.880 3 68 6.5E-24 T 13-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 ambt_04260 4215e35551673aeb2764953312d6952b 199 PIRSF PIRSF016938 1 185 5.9E-23 T 13-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 ambt_09940 39498ec84857d6c3ae4eb0846e03939d 211 Pfam PF13460 NAD(P)H-binding 8 188 6.1E-42 T 13-10-2018 IPR016040 NAD(P)-binding domain ambt_09940 39498ec84857d6c3ae4eb0846e03939d 211 SUPERFAMILY SSF51735 2 202 1.16E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_09940 39498ec84857d6c3ae4eb0846e03939d 211 Gene3D G3DSA:3.40.50.720 1 211 5.8E-53 T 13-10-2018 ambt_03590 375c4d8b487786a3316c3d208df15b33 207 SUPERFAMILY SSF52540 47 177 5.31E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_03590 375c4d8b487786a3316c3d208df15b33 207 Pfam PF13469 Sulfotransferase family 69 170 6.0E-8 T 13-10-2018 ambt_03590 375c4d8b487786a3316c3d208df15b33 207 Gene3D G3DSA:3.40.50.300 3 195 3.2E-25 T 13-10-2018 ambt_13505 a885f84528f07deb9a7baa9980a5db68 140 Pfam PF00460 Flagella basal body rod protein 7 32 1.4E-5 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ambt_13505 a885f84528f07deb9a7baa9980a5db68 140 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 91 136 1.9E-11 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ambt_13505 a885f84528f07deb9a7baa9980a5db68 140 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 1.4E-46 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 ambt_13505 a885f84528f07deb9a7baa9980a5db68 140 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ambt_13105 4293cf41e38bc4956d9a7ee197bec326 692 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 520 536 2.4E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ambt_13105 4293cf41e38bc4956d9a7ee197bec326 692 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 591 602 2.4E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ambt_13105 4293cf41e38bc4956d9a7ee197bec326 692 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 481 493 2.4E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ambt_13105 4293cf41e38bc4956d9a7ee197bec326 692 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 499 511 2.4E-21 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ambt_13105 4293cf41e38bc4956d9a7ee197bec326 692 Gene3D G3DSA:1.10.1380.10 86 476 6.9E-221 T 13-10-2018 ambt_13105 4293cf41e38bc4956d9a7ee197bec326 692 Gene3D G3DSA:3.40.390.10 56 692 6.9E-221 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 ambt_13105 4293cf41e38bc4956d9a7ee197bec326 692 Pfam PF01431 Peptidase family M13 489 689 1.7E-65 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ambt_13105 4293cf41e38bc4956d9a7ee197bec326 692 Pfam PF05649 Peptidase family M13 60 437 1.3E-94 T 13-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 ambt_13105 4293cf41e38bc4956d9a7ee197bec326 692 SUPERFAMILY SSF55486 49 692 9.67E-196 T 13-10-2018 ambt_01620 dc685fab4b767a77b668315404765e8e 441 Gene3D G3DSA:3.10.450.350 73 153 1.1E-15 T 13-10-2018 ambt_01620 dc685fab4b767a77b668315404765e8e 441 Pfam PF01551 Peptidase family M23 306 400 4.2E-28 T 13-10-2018 IPR016047 Peptidase M23 ambt_01620 dc685fab4b767a77b668315404765e8e 441 Pfam PF04225 Opacity-associated protein A LysM-like domain 80 155 2.1E-10 T 13-10-2018 IPR007340 Opacity-associated protein A ambt_01620 dc685fab4b767a77b668315404765e8e 441 Gene3D G3DSA:2.70.70.10 277 406 4.7E-79 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_01620 dc685fab4b767a77b668315404765e8e 441 Gene3D G3DSA:3.10.450.350 184 420 4.7E-79 T 13-10-2018 ambt_01620 dc685fab4b767a77b668315404765e8e 441 Pfam PF08525 Opacity-associated protein A N-terminal motif 13 40 3.9E-7 T 13-10-2018 IPR013731 Opacity-associated protein A, N-terminal ambt_01620 dc685fab4b767a77b668315404765e8e 441 SUPERFAMILY SSF51261 160 401 9.94E-66 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_14835 8696f778b54271a07d824331635afbf1 338 Gene3D G3DSA:3.30.1490.70 90 243 2.4E-53 T 13-10-2018 ambt_14835 8696f778b54271a07d824331635afbf1 338 Pfam PF01068 ATP dependent DNA ligase domain 96 251 4.5E-7 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 ambt_14835 8696f778b54271a07d824331635afbf1 338 SUPERFAMILY SSF56091 80 251 6.91E-35 T 13-10-2018 ambt_14835 8696f778b54271a07d824331635afbf1 338 SUPERFAMILY SSF50249 225 330 2.11E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_14835 8696f778b54271a07d824331635afbf1 338 Gene3D G3DSA:3.30.470.30 105 204 2.4E-53 T 13-10-2018 ambt_14835 8696f778b54271a07d824331635afbf1 338 Pfam PF14743 DNA ligase OB-like domain 265 330 1.1E-27 T 13-10-2018 IPR029319 DNA ligase, OB-like domain ambt_14835 8696f778b54271a07d824331635afbf1 338 Gene3D G3DSA:2.40.50.140 251 335 3.4E-10 T 13-10-2018 ambt_13110 f57bf848866ebd2905837b35cd0c1efe 193 SUPERFAMILY SSF46689 6 68 7.7E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_13110 f57bf848866ebd2905837b35cd0c1efe 193 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 193 82.311 T 13-10-2018 IPR017757 Transcriptional repressor BetI ambt_13110 f57bf848866ebd2905837b35cd0c1efe 193 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 79 185 2.6E-23 T 13-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal ambt_13110 f57bf848866ebd2905837b35cd0c1efe 193 Gene3D G3DSA:1.10.357.10 6 189 2.4E-35 T 13-10-2018 ambt_13110 f57bf848866ebd2905837b35cd0c1efe 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ambt_13110 f57bf848866ebd2905837b35cd0c1efe 193 SUPERFAMILY SSF48498 78 187 8.89E-12 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ambt_13110 f57bf848866ebd2905837b35cd0c1efe 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 9.2E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_13110 f57bf848866ebd2905837b35cd0c1efe 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.8E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_13110 f57bf848866ebd2905837b35cd0c1efe 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.8E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_13110 f57bf848866ebd2905837b35cd0c1efe 193 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 185 5.2E-66 T 13-10-2018 IPR017757 Transcriptional repressor BetI ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 220 4.3E-55 T 13-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 Pfam PF00703 Glycosyl hydrolases family 2 223 334 2.5E-14 T 13-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 Gene3D G3DSA:2.60.40.10 222 334 7.0E-23 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 Hamap MF_01687 Beta-galactosidase [lacZ]. 2 1059 16.524 T 13-10-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 Gene3D G3DSA:3.20.20.80 335 625 5.5E-120 T 13-10-2018 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 SUPERFAMILY SSF49303 223 334 1.73E-20 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 SUPERFAMILY SSF49785 10 221 9.92E-62 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 Pfam PF02929 Beta galactosidase small chain 786 1053 2.4E-64 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 Gene3D G3DSA:2.60.120.260 5 221 8.9E-82 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 SUPERFAMILY SSF74650 768 1055 5.81E-88 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 SMART SM01038 781 1057 4.0E-100 T 13-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 448 462 - T 13-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 336 629 4.1E-109 T 13-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 Pfam PF16353 Domain of unknown function(DUF4981) 645 731 2.7E-17 T 13-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 386 411 - T 13-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 Gene3D G3DSA:2.60.40.10 636 735 1.5E-20 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 SUPERFAMILY SSF49303 622 734 7.12E-23 T 13-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 SUPERFAMILY SSF51445 339 624 3.13E-96 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 Gene3D G3DSA:2.70.98.10 764 1058 5.3E-88 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 PRINTS PR00132 Glycosyl hydrolase family 2 signature 376 394 2.7E-37 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 PRINTS PR00132 Glycosyl hydrolase family 2 signature 448 463 2.7E-37 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 PRINTS PR00132 Glycosyl hydrolase family 2 signature 148 163 2.7E-37 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 PRINTS PR00132 Glycosyl hydrolase family 2 signature 532 547 2.7E-37 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ambt_17095 56c2efbc9f6f4b0c8323b5d201618ea6 1060 PRINTS PR00132 Glycosyl hydrolase family 2 signature 345 359 2.7E-37 T 13-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ambt_07135 ff6070a08bb1d53d348e942e250315f4 216 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 134 211 8.8E-16 T 13-10-2018 IPR006260 TonB/TolA, C-terminal ambt_07135 ff6070a08bb1d53d348e942e250315f4 216 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 134 199 1.4E-17 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 ambt_07135 ff6070a08bb1d53d348e942e250315f4 216 PRINTS PR01374 Gram-negative bacterial tonB protein signature 128 149 7.0E-12 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_07135 ff6070a08bb1d53d348e942e250315f4 216 PRINTS PR01374 Gram-negative bacterial tonB protein signature 69 79 7.0E-12 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_07135 ff6070a08bb1d53d348e942e250315f4 216 PRINTS PR01374 Gram-negative bacterial tonB protein signature 149 167 7.0E-12 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_07135 ff6070a08bb1d53d348e942e250315f4 216 PRINTS PR01374 Gram-negative bacterial tonB protein signature 168 185 7.0E-12 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_07135 ff6070a08bb1d53d348e942e250315f4 216 Gene3D G3DSA:3.30.1150.10 109 212 5.8E-25 T 13-10-2018 ambt_07135 ff6070a08bb1d53d348e942e250315f4 216 SUPERFAMILY SSF74653 128 203 5.76E-23 T 13-10-2018 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 SUPERFAMILY SSF55347 615 798 3.01E-50 T 13-10-2018 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 607 2.7E-24 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 SUPERFAMILY SSF51735 464 637 1.74E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 Gene3D G3DSA:3.40.50.720 466 812 2.3E-119 T 13-10-2018 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 PIRSF PIRSF000727 1 818 0.0 T 13-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 SUPERFAMILY SSF55021 383 475 8.01E-23 T 13-10-2018 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 Pfam PF00696 Amino acid kinase family 2 284 7.2E-41 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 661 683 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 SUPERFAMILY SSF55021 306 381 1.62E-21 T 13-10-2018 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 Gene3D G3DSA:1.20.120.1320 41 142 8.0E-79 T 13-10-2018 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 SUPERFAMILY SSF53633 1 298 6.17E-70 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 8.8E-123 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 Pfam PF00742 Homoserine dehydrogenase 615 811 1.2E-48 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 Gene3D G3DSA:3.40.1160.10 3 295 8.0E-79 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 Pfam PF01842 ACT domain 324 381 3.6E-8 T 13-10-2018 IPR002912 ACT domain ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 Gene3D G3DSA:3.30.2130.10 303 464 2.4E-49 T 13-10-2018 ambt_01950 f9710afcf5650b1fce3f50fe11d63ee0 821 Gene3D G3DSA:3.30.360.10 626 796 2.3E-119 T 13-10-2018 ambt_15255 d2552e54dac69baae0bd9a24e5496944 341 Pfam PF13353 4Fe-4S single cluster domain 111 183 1.9E-7 T 13-10-2018 ambt_15255 d2552e54dac69baae0bd9a24e5496944 341 SUPERFAMILY SSF102114 104 333 5.1E-27 T 13-10-2018 ambt_15255 d2552e54dac69baae0bd9a24e5496944 341 Pfam PF04055 Radical SAM superfamily 118 209 3.0E-8 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_15255 d2552e54dac69baae0bd9a24e5496944 341 Gene3D G3DSA:3.20.20.70 51 334 1.2E-89 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_15255 d2552e54dac69baae0bd9a24e5496944 341 PIRSF PIRSF004911 3 340 9.3E-116 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ambt_15255 d2552e54dac69baae0bd9a24e5496944 341 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 4.2E-147 T 13-10-2018 IPR022462 Lysine-2,3-aminomutase-like ambt_15255 d2552e54dac69baae0bd9a24e5496944 341 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 326 1.5E-113 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ambt_05030 4d6e19d8e9dbf35289f6d41413a82332 404 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 8.8E-29 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal ambt_05030 4d6e19d8e9dbf35289f6d41413a82332 404 SUPERFAMILY SSF53901 1 251 2.16E-61 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_05030 4d6e19d8e9dbf35289f6d41413a82332 404 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site ambt_05030 4d6e19d8e9dbf35289f6d41413a82332 404 SUPERFAMILY SSF53901 213 402 4.4E-60 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_05030 4d6e19d8e9dbf35289f6d41413a82332 404 Gene3D G3DSA:3.40.47.10 258 402 2.3E-46 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_05030 4d6e19d8e9dbf35289f6d41413a82332 404 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 244 2.1E-40 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal ambt_05030 4d6e19d8e9dbf35289f6d41413a82332 404 SMART SM00825 Beta-ketoacyl synthase 4 404 2.7E-12 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ambt_05030 4d6e19d8e9dbf35289f6d41413a82332 404 Gene3D G3DSA:3.40.47.10 1 253 2.8E-63 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_15335 4ee9336dca97d0abd53822e388975399 461 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 218 453 8.4E-98 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ambt_15335 4ee9336dca97d0abd53822e388975399 461 SUPERFAMILY SSF75615 114 206 6.41E-22 T 13-10-2018 ambt_15335 4ee9336dca97d0abd53822e388975399 461 Gene3D G3DSA:1.10.8.210 149 210 1.8E-6 T 13-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ambt_15335 4ee9336dca97d0abd53822e388975399 461 SUPERFAMILY SSF53790 214 459 5.5E-84 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ambt_15335 4ee9336dca97d0abd53822e388975399 461 SUPERFAMILY SSF51735 1 112 2.22E-22 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_15335 4ee9336dca97d0abd53822e388975399 461 Gene3D G3DSA:3.30.950.10 334 461 1.3E-47 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ambt_15335 4ee9336dca97d0abd53822e388975399 461 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 298 331 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ambt_15335 4ee9336dca97d0abd53822e388975399 461 PIRSF PIRSF036426 1 461 1.8E-194 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ambt_15335 4ee9336dca97d0abd53822e388975399 461 Gene3D G3DSA:3.40.1010.10 216 333 3.3E-48 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ambt_15335 4ee9336dca97d0abd53822e388975399 461 Gene3D G3DSA:3.40.50.720 1 112 9.3E-34 T 13-10-2018 ambt_15335 4ee9336dca97d0abd53822e388975399 461 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 2.1E-18 T 13-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ambt_15335 4ee9336dca97d0abd53822e388975399 461 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 220 429 9.7E-54 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ambt_15335 4ee9336dca97d0abd53822e388975399 461 Hamap MF_01646 Siroheme synthase [cysG]. 1 461 49.905 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ambt_15335 4ee9336dca97d0abd53822e388975399 461 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 1.0E-63 T 13-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ambt_15335 4ee9336dca97d0abd53822e388975399 461 Gene3D G3DSA:3.30.160.110 113 148 1.1E-16 T 13-10-2018 ambt_15335 4ee9336dca97d0abd53822e388975399 461 Pfam PF13241 Putative NAD(P)-binding 6 115 1.5E-27 T 13-10-2018 ambt_19185 8a1ae81b37aab9970edb3e9d2ac4ef69 460 Gene3D G3DSA:3.40.630.10 27 363 8.7E-57 T 13-10-2018 ambt_19185 8a1ae81b37aab9970edb3e9d2ac4ef69 460 Pfam PF04389 Peptidase family M28 119 324 8.3E-20 T 13-10-2018 IPR007484 Peptidase M28 ambt_19185 8a1ae81b37aab9970edb3e9d2ac4ef69 460 SUPERFAMILY SSF49265 361 448 2.95E-10 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 ambt_19185 8a1ae81b37aab9970edb3e9d2ac4ef69 460 SUPERFAMILY SSF53187 38 365 1.32E-48 T 13-10-2018 ambt_19185 8a1ae81b37aab9970edb3e9d2ac4ef69 460 Gene3D G3DSA:2.60.40.10 364 451 1.4E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_07730 4aa32923b7c7137f1755078d52f4bed2 354 Gene3D G3DSA:3.40.50.720 121 316 1.1E-132 T 13-10-2018 ambt_07730 4aa32923b7c7137f1755078d52f4bed2 354 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 242 258 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ambt_07730 4aa32923b7c7137f1755078d52f4bed2 354 Gene3D G3DSA:3.40.50.720 2 335 1.1E-132 T 13-10-2018 ambt_07730 4aa32923b7c7137f1755078d52f4bed2 354 SUPERFAMILY SSF52283 39 153 2.65E-34 T 13-10-2018 ambt_07730 4aa32923b7c7137f1755078d52f4bed2 354 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 166 193 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ambt_07730 4aa32923b7c7137f1755078d52f4bed2 354 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 39 344 1.7E-27 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ambt_07730 4aa32923b7c7137f1755078d52f4bed2 354 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 129 316 3.6E-58 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ambt_07730 4aa32923b7c7137f1755078d52f4bed2 354 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 213 235 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ambt_07730 4aa32923b7c7137f1755078d52f4bed2 354 SUPERFAMILY SSF51735 121 317 4.34E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_14385 87898d7467abf19d25ec908301bb22c6 299 Gene3D G3DSA:3.20.20.70 2 299 4.3E-124 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_14385 87898d7467abf19d25ec908301bb22c6 299 SUPERFAMILY SSF51569 7 297 3.98E-92 T 13-10-2018 ambt_14385 87898d7467abf19d25ec908301bb22c6 299 Pfam PF00274 Fructose-bisphosphate aldolase class-I 20 206 9.5E-10 T 13-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 SUPERFAMILY SSF55973 110 232 1.38E-51 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 Gene3D G3DSA:3.30.300.10 102 373 7.6E-175 T 13-10-2018 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 8.4E-194 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 1.8E-67 T 13-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 Gene3D G3DSA:3.30.300.10 5 233 7.6E-175 T 13-10-2018 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.5E-43 T 13-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 Gene3D G3DSA:3.30.300.10 11 270 7.6E-175 T 13-10-2018 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 SUPERFAMILY SSF55973 4 109 1.45E-47 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 57.925 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 SUPERFAMILY SSF55973 233 379 1.65E-68 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 1.1E-44 T 13-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ambt_14405 fe524a27f144ea2c3640d278917e6530 381 PIRSF PIRSF000497 1 381 6.8E-172 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ambt_09945 1902e721d3887199ce90885174b2b590 185 TIGRFAM TIGR04026 PPOX_FMN_cyano: PPOX class probable FMN-dependent enzyme, alr4036 family 1 185 1.1E-61 T 13-10-2018 IPR024015 Pyridoxamine 5'-phosphate oxidase, probable FMN-dependent, Alr4036 family KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282 ambt_09945 1902e721d3887199ce90885174b2b590 185 SUPERFAMILY SSF50475 1 185 1.42E-32 T 13-10-2018 ambt_09945 1902e721d3887199ce90885174b2b590 185 Pfam PF12766 Pyridoxamine 5'-phosphate oxidase 1 93 1.6E-21 T 13-10-2018 IPR024624 Pyridoxamine 5'-phosphate oxidase, Alr4036 family, FMN-binding domain GO:0010181 ambt_09945 1902e721d3887199ce90885174b2b590 185 Gene3D G3DSA:2.30.110.10 1 185 4.0E-49 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ambt_12360 8accb011e97baf56a08743d62ea2d8f7 436 Gene3D G3DSA:3.40.47.10 6 435 3.5E-110 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_12360 8accb011e97baf56a08743d62ea2d8f7 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 ambt_12360 8accb011e97baf56a08743d62ea2d8f7 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 1.9E-125 T 13-10-2018 IPR002155 Thiolase GO:0016747 ambt_12360 8accb011e97baf56a08743d62ea2d8f7 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 3.1E-249 T 13-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 ambt_12360 8accb011e97baf56a08743d62ea2d8f7 436 Pfam PF02803 Thiolase, C-terminal domain 295 434 1.7E-36 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ambt_12360 8accb011e97baf56a08743d62ea2d8f7 436 PIRSF PIRSF000429 9 436 4.5E-115 T 13-10-2018 IPR002155 Thiolase GO:0016747 ambt_12360 8accb011e97baf56a08743d62ea2d8f7 436 SUPERFAMILY SSF53901 15 294 1.35E-58 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_12360 8accb011e97baf56a08743d62ea2d8f7 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 1.1E-58 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ambt_12360 8accb011e97baf56a08743d62ea2d8f7 436 SUPERFAMILY SSF53901 296 434 8.16E-31 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_12360 8accb011e97baf56a08743d62ea2d8f7 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 67.865 T 13-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 ambt_16075 ba1f3c85559f4508400872ab43e2dae4 337 Gene3D G3DSA:3.40.50.720 6 327 9.9E-108 T 13-10-2018 ambt_16075 ba1f3c85559f4508400872ab43e2dae4 337 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 150 166 - T 13-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ambt_16075 ba1f3c85559f4508400872ab43e2dae4 337 SMART SM00859 3 147 1.7E-40 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ambt_16075 ba1f3c85559f4508400872ab43e2dae4 337 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 336 35.563 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ambt_16075 ba1f3c85559f4508400872ab43e2dae4 337 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 336 1.6E-108 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ambt_16075 ba1f3c85559f4508400872ab43e2dae4 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 147 3.0E-26 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ambt_16075 ba1f3c85559f4508400872ab43e2dae4 337 SUPERFAMILY SSF55347 155 310 1.7E-45 T 13-10-2018 ambt_16075 ba1f3c85559f4508400872ab43e2dae4 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 164 313 4.9E-7 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ambt_16075 ba1f3c85559f4508400872ab43e2dae4 337 SUPERFAMILY SSF51735 2 183 6.59E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_16075 ba1f3c85559f4508400872ab43e2dae4 337 Gene3D G3DSA:3.30.360.10 154 314 9.9E-108 T 13-10-2018 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 TIGRFAM TIGR00016 ackA: acetate kinase 2 392 2.3E-143 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 Pfam PF00871 Acetokinase family 5 386 1.3E-139 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 PRINTS PR00471 Acetate kinase family signature 296 309 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 PRINTS PR00471 Acetate kinase family signature 199 220 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 PRINTS PR00471 Acetate kinase family signature 374 386 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 PRINTS PR00471 Acetate kinase family signature 169 182 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 PRINTS PR00471 Acetate kinase family signature 318 334 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 PRINTS PR00471 Acetate kinase family signature 5 16 1.8E-44 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 Gene3D G3DSA:3.30.420.40 192 393 9.1E-76 T 13-10-2018 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 SUPERFAMILY SSF53067 153 391 6.39E-82 T 13-10-2018 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 PIRSF PIRSF000722 1 393 6.9E-134 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 Gene3D G3DSA:3.30.420.40 2 191 2.4E-63 T 13-10-2018 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 SUPERFAMILY SSF53067 4 192 2.89E-59 T 13-10-2018 ambt_11430 d4ce1b3ad4fa3358e3d4ef558ec06e4b 393 Hamap MF_00020 Acetate kinase [ackA]. 1 393 168.523 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 Pfam PF00990 Diguanylate cyclase, GGDEF domain 827 1001 2.3E-40 T 13-10-2018 IPR000160 GGDEF domain ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 SUPERFAMILY SSF50998 139 545 4.79E-10 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 823 1003 2.7E-40 T 13-10-2018 IPR000160 GGDEF domain ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 Gene3D G3DSA:2.130.10.10 435 642 9.4E-30 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 Gene3D G3DSA:3.30.70.270 811 1005 2.2E-49 T 13-10-2018 ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 SMART SM00267 815 1006 3.3E-46 T 13-10-2018 IPR000160 GGDEF domain ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 Pfam PF07494 Two component regulator propeller 523 544 0.0089 T 13-10-2018 IPR011110 Two component regulator propeller ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 Pfam PF07495 Y_Y_Y domain 693 750 3.8E-10 T 13-10-2018 IPR011123 Two component regulator three Y ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 Gene3D G3DSA:2.60.40.10 647 770 2.0E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 SUPERFAMILY SSF50998 26 346 2.35E-9 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 Gene3D G3DSA:2.130.10.10 30 252 8.9E-26 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 SUPERFAMILY SSF55073 831 1004 2.2E-39 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_05570 0700a4108ca16c0d9ed3d5b408aae576 1041 Gene3D G3DSA:2.130.10.10 253 423 4.5E-21 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_19530 4b451672de80f7331230443eb079dd7f 270 Pfam PF01061 ABC-2 type transporter 23 232 4.0E-40 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ambt_19530 4b451672de80f7331230443eb079dd7f 270 PIRSF PIRSF006648 1 266 1.6E-26 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_19530 4b451672de80f7331230443eb079dd7f 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 190 209 9.5E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_19530 4b451672de80f7331230443eb079dd7f 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 116 141 9.5E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_19530 4b451672de80f7331230443eb079dd7f 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 72 94 9.5E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_19530 4b451672de80f7331230443eb079dd7f 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 153 177 9.5E-9 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_17145 4c877ac412a3ce8e4dac14ab4655816a 159 Pfam PF04093 rod shape-determining protein MreD 8 151 8.6E-30 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 ambt_17145 4c877ac412a3ce8e4dac14ab4655816a 159 PIRSF PIRSF018472 1 159 6.2E-55 T 13-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type ambt_17145 4c877ac412a3ce8e4dac14ab4655816a 159 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 7 151 1.0E-42 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 ambt_16305 3fce8fafd2375c148ae2ee21982f207c 427 Gene3D G3DSA:3.90.1150.10 7 419 1.9E-176 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_16305 3fce8fafd2375c148ae2ee21982f207c 427 SUPERFAMILY SSF53383 2 423 2.58E-135 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_16305 3fce8fafd2375c148ae2ee21982f207c 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ambt_16305 3fce8fafd2375c148ae2ee21982f207c 427 Pfam PF00202 Aminotransferase class-III 32 396 1.9E-78 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ambt_16305 3fce8fafd2375c148ae2ee21982f207c 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 2.7E-195 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ambt_16305 3fce8fafd2375c148ae2ee21982f207c 427 Gene3D G3DSA:3.40.640.10 69 317 1.9E-176 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_16305 3fce8fafd2375c148ae2ee21982f207c 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 103.885 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ambt_11665 6b6335e95922c634dd081222950dadb5 393 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 7 387 5.6E-188 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ambt_11665 6b6335e95922c634dd081222950dadb5 393 SUPERFAMILY SSF53686 6 388 6.68E-140 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ambt_11665 6b6335e95922c634dd081222950dadb5 393 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 376 2.2E-48 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ambt_11665 6b6335e95922c634dd081222950dadb5 393 Gene3D G3DSA:3.40.50.1100 53 382 5.9E-179 T 13-10-2018 ambt_11665 6b6335e95922c634dd081222950dadb5 393 Gene3D G3DSA:3.40.50.1100 9 204 5.9E-179 T 13-10-2018 ambt_11665 6b6335e95922c634dd081222950dadb5 393 PIRSF PIRSF001413 1 393 4.4E-160 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ambt_11665 6b6335e95922c634dd081222950dadb5 393 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 389 49.943 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ambt_11665 6b6335e95922c634dd081222950dadb5 393 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 Gene3D G3DSA:3.30.930.10 105 430 7.0E-114 T 13-10-2018 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 226 405 8.0E-35 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 PIRSF PIRSF001529 1 430 2.2E-179 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 427 40.444 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 SUPERFAMILY SSF46589 1 112 6.28E-29 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 PRINTS PR00981 Seryl-tRNA synthetase signature 338 354 1.5E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 PRINTS PR00981 Seryl-tRNA synthetase signature 356 372 1.5E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 PRINTS PR00981 Seryl-tRNA synthetase signature 281 294 1.5E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 PRINTS PR00981 Seryl-tRNA synthetase signature 321 334 1.5E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 PRINTS PR00981 Seryl-tRNA synthetase signature 269 281 1.5E-33 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.1E-28 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 Gene3D G3DSA:1.10.287.40 1 104 8.7E-18 T 13-10-2018 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 SUPERFAMILY SSF55681 116 423 3.04E-99 T 13-10-2018 ambt_08450 cd3da58d889bd0ebda285f919bdecfa7 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 422 1.4E-168 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ambt_06500 974dc6fbda1509289cc95c1166b4126d 389 Pfam PF00005 ABC transporter 21 166 9.1E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_06500 974dc6fbda1509289cc95c1166b4126d 389 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_06500 974dc6fbda1509289cc95c1166b4126d 389 Gene3D G3DSA:3.40.50.300 9 239 6.9E-47 T 13-10-2018 ambt_06500 974dc6fbda1509289cc95c1166b4126d 389 Gene3D G3DSA:2.40.50.100 312 388 1.0E-7 T 13-10-2018 ambt_06500 974dc6fbda1509289cc95c1166b4126d 389 SUPERFAMILY SSF52540 21 234 2.15E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_06500 974dc6fbda1509289cc95c1166b4126d 389 SMART SM00382 20 217 2.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_06500 974dc6fbda1509289cc95c1166b4126d 389 SUPERFAMILY SSF50331 322 387 9.23E-7 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 343 4.4E-12 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 Gene3D G3DSA:3.40.50.300 440 653 8.4E-78 T 13-10-2018 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 SUPERFAMILY SSF52540 438 743 6.74E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 SUPERFAMILY SSF81923 1 143 1.57E-57 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 735 0.0 T 13-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 Gene3D G3DSA:1.10.1780.10 1 144 2.5E-40 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 654 734 7.0E-23 T 13-10-2018 IPR019489 Clp ATPase, C-terminal ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 SMART SM01086 654 743 2.6E-32 T 13-10-2018 IPR019489 Clp ATPase, C-terminal ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 519 537 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 Gene3D G3DSA:1.10.8.60 654 758 3.3E-30 T 13-10-2018 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 Gene3D G3DSA:3.40.50.300 159 351 1.1E-66 T 13-10-2018 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 1.5E-35 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 1.5E-35 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 1.5E-35 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 1.5E-35 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 487 646 2.2E-49 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 4.5E-14 T 13-10-2018 IPR004176 Clp, N-terminal ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 Gene3D G3DSA:1.10.8.60 352 439 2.5E-33 T 13-10-2018 ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 SMART SM00382 207 352 1.2E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 SMART SM00382 488 655 5.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 SUPERFAMILY SSF52540 168 432 2.38E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_09655 c774063d07dd4f5f947bf1bbb5fb0e84 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 303 315 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ambt_17455 e01d06619bebfbd3b96a798df6b70ee3 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 3.2E-59 T 13-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 ambt_17455 e01d06619bebfbd3b96a798df6b70ee3 161 Pfam PF03737 Aldolase/RraA 7 152 9.7E-35 T 13-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ambt_17455 e01d06619bebfbd3b96a798df6b70ee3 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 5.8E-79 T 13-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 ambt_17455 e01d06619bebfbd3b96a798df6b70ee3 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 45.057 T 13-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 ambt_17455 e01d06619bebfbd3b96a798df6b70ee3 161 Gene3D G3DSA:3.50.30.40 1 161 6.2E-55 T 13-10-2018 ambt_17455 e01d06619bebfbd3b96a798df6b70ee3 161 SUPERFAMILY SSF89562 2 158 6.8E-44 T 13-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ambt_02900 b10b46989810c081cd2b1010550e7ed0 171 SUPERFAMILY SSF81452 1 169 1.83E-50 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02900 b10b46989810c081cd2b1010550e7ed0 171 Gene3D G3DSA:1.20.120.80 1 171 2.9E-51 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02900 b10b46989810c081cd2b1010550e7ed0 171 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 1 171 3.1E-75 T 13-10-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 ambt_02900 b10b46989810c081cd2b1010550e7ed0 171 Pfam PF00510 Cytochrome c oxidase subunit III 34 169 7.7E-14 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_14355 89a1ca3f8ec62dfcdc168e86ad419377 268 SMART SM00382 46 240 5.6E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_14355 89a1ca3f8ec62dfcdc168e86ad419377 268 Gene3D G3DSA:3.40.50.300 17 265 3.4E-68 T 13-10-2018 ambt_14355 89a1ca3f8ec62dfcdc168e86ad419377 268 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_14355 89a1ca3f8ec62dfcdc168e86ad419377 268 Pfam PF00005 ABC transporter 37 193 1.7E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_14355 89a1ca3f8ec62dfcdc168e86ad419377 268 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 22 268 5.7E-118 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 ambt_14355 89a1ca3f8ec62dfcdc168e86ad419377 268 SUPERFAMILY SSF52540 18 255 5.44E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 2.1E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.1E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 2.1E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 164 0.0095 T 13-10-2018 ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 SUPERFAMILY SSF51735 2 254 1.35E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 Pfam PF00106 short chain dehydrogenase 8 189 4.4E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.8E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.8E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.8E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 1.8E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04900 0e4ebb187f3a2d34c80f30bb8fbc6912 281 Gene3D G3DSA:3.40.50.720 5 249 7.6E-54 T 13-10-2018 ambt_13675 03ec9d47c7a65fab6cb0381ffe82ab82 395 SUPERFAMILY SSF69055 298 390 9.42E-29 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ambt_13675 03ec9d47c7a65fab6cb0381ffe82ab82 395 Gene3D G3DSA:3.40.50.720 1 150 1.5E-49 T 13-10-2018 ambt_13675 03ec9d47c7a65fab6cb0381ffe82ab82 395 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 5.6E-43 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ambt_13675 03ec9d47c7a65fab6cb0381ffe82ab82 395 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 235 5.9E-37 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ambt_13675 03ec9d47c7a65fab6cb0381ffe82ab82 395 PIRSF PIRSF006205 1 394 2.0E-146 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ambt_13675 03ec9d47c7a65fab6cb0381ffe82ab82 395 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 388 45.354 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ambt_13675 03ec9d47c7a65fab6cb0381ffe82ab82 395 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 383 2.7E-38 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ambt_13675 03ec9d47c7a65fab6cb0381ffe82ab82 395 SUPERFAMILY SSF55347 126 270 1.8E-59 T 13-10-2018 ambt_13675 03ec9d47c7a65fab6cb0381ffe82ab82 395 Gene3D G3DSA:1.10.1740.10 308 392 1.3E-27 T 13-10-2018 ambt_13675 03ec9d47c7a65fab6cb0381ffe82ab82 395 SUPERFAMILY SSF51735 2 150 1.52E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_13675 03ec9d47c7a65fab6cb0381ffe82ab82 395 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 386 1.7E-153 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ambt_07575 3b706bf038afc5cf343ba956f539d696 939 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 936 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ambt_07575 3b706bf038afc5cf343ba956f539d696 939 Gene3D G3DSA:1.10.287.1150 90 171 4.3E-27 T 13-10-2018 ambt_07575 3b706bf038afc5cf343ba956f539d696 939 Gene3D G3DSA:3.40.50.11610 727 933 2.6E-171 T 13-10-2018 ambt_07575 3b706bf038afc5cf343ba956f539d696 939 SMART SM00861 597 790 2.0E-61 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ambt_07575 3b706bf038afc5cf343ba956f539d696 939 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 51 1.2E-16 T 13-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ambt_07575 3b706bf038afc5cf343ba956f539d696 939 Gene3D G3DSA:3.40.50.12470 560 806 2.6E-171 T 13-10-2018 ambt_07575 3b706bf038afc5cf343ba956f539d696 939 SUPERFAMILY SSF52518 125 549 1.64E-86 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_07575 3b706bf038afc5cf343ba956f539d696 939 Gene3D G3DSA:3.40.50.970 172 537 1.1E-145 T 13-10-2018 ambt_07575 3b706bf038afc5cf343ba956f539d696 939 Pfam PF02779 Transketolase, pyrimidine binding domain 596 791 3.7E-66 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ambt_07575 3b706bf038afc5cf343ba956f539d696 939 SUPERFAMILY SSF52518 580 797 3.43E-52 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_07575 3b706bf038afc5cf343ba956f539d696 939 Pfam PF00676 Dehydrogenase E1 component 222 521 2.1E-51 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ambt_07575 3b706bf038afc5cf343ba956f539d696 939 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 794 936 2.4E-53 T 13-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ambt_07575 3b706bf038afc5cf343ba956f539d696 939 PIRSF PIRSF000157 1 938 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ambt_07360 c55c56d36896347a8912de70677ebd11 475 Pfam PF02321 Outer membrane efflux protein 255 431 4.2E-12 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_07360 c55c56d36896347a8912de70677ebd11 475 Pfam PF02321 Outer membrane efflux protein 51 227 8.4E-5 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_07360 c55c56d36896347a8912de70677ebd11 475 Gene3D G3DSA:1.20.1600.10 29 462 9.0E-41 T 13-10-2018 ambt_07360 c55c56d36896347a8912de70677ebd11 475 SUPERFAMILY SSF56954 1 432 5.36E-53 T 13-10-2018 ambt_08955 0fe0ee4613b90cdce4d7ca838f95ec3a 269 Gene3D G3DSA:3.30.980.20 98 186 5.9E-83 T 13-10-2018 ambt_08955 0fe0ee4613b90cdce4d7ca838f95ec3a 269 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 5 267 4.1E-69 T 13-10-2018 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 ambt_08955 0fe0ee4613b90cdce4d7ca838f95ec3a 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 71 4.9E-10 T 13-10-2018 ambt_08955 0fe0ee4613b90cdce4d7ca838f95ec3a 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 184 231 5.9E-7 T 13-10-2018 ambt_08955 0fe0ee4613b90cdce4d7ca838f95ec3a 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 1.1E-25 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ambt_08955 0fe0ee4613b90cdce4d7ca838f95ec3a 269 Gene3D G3DSA:3.40.50.1000 5 259 5.9E-83 T 13-10-2018 IPR023214 HAD superfamily ambt_08955 0fe0ee4613b90cdce4d7ca838f95ec3a 269 SUPERFAMILY SSF56784 1 231 3.63E-45 T 13-10-2018 IPR036412 HAD-like superfamily ambt_04185 573df8172291322a68bc5fcf16b29e10 179 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 1.1E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04185 573df8172291322a68bc5fcf16b29e10 179 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04185 573df8172291322a68bc5fcf16b29e10 179 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 9.1E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_14040 d3cc6a63f724ec19e0ad2f5973b5f9da 414 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 1 413 48.324 T 13-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 ambt_14040 d3cc6a63f724ec19e0ad2f5973b5f9da 414 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ambt_14040 d3cc6a63f724ec19e0ad2f5973b5f9da 414 SMART SM00487 20 222 8.0E-51 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_14040 d3cc6a63f724ec19e0ad2f5973b5f9da 414 Pfam PF00270 DEAD/DEAH box helicase 25 189 5.5E-43 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_14040 d3cc6a63f724ec19e0ad2f5973b5f9da 414 SUPERFAMILY SSF52540 74 356 5.97E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14040 d3cc6a63f724ec19e0ad2f5973b5f9da 414 SMART SM00490 258 339 4.4E-32 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_14040 d3cc6a63f724ec19e0ad2f5973b5f9da 414 Gene3D G3DSA:3.40.50.300 1 209 3.7E-69 T 13-10-2018 ambt_14040 d3cc6a63f724ec19e0ad2f5973b5f9da 414 Pfam PF00271 Helicase conserved C-terminal domain 235 339 1.6E-32 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_14040 d3cc6a63f724ec19e0ad2f5973b5f9da 414 Gene3D G3DSA:3.40.50.300 214 414 4.1E-49 T 13-10-2018 ambt_20650 640ef4cecd49c3cf96c7c5d5de589f86 320 Pfam PF01774 UreD urease accessory protein 75 293 1.8E-40 T 13-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 ambt_20650 640ef4cecd49c3cf96c7c5d5de589f86 320 Hamap MF_01384 Urease accessory protein UreD [ureD]. 33 304 24.783 T 13-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 ambt_17500 4c567479bef0b51010d4adce5074dc95 272 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 203 231 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ambt_17500 4c567479bef0b51010d4adce5074dc95 272 SMART SM00971 10 114 3.5E-49 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ambt_17500 4c567479bef0b51010d4adce5074dc95 272 Gene3D G3DSA:2.160.10.10 144 266 1.1E-36 T 13-10-2018 ambt_17500 4c567479bef0b51010d4adce5074dc95 272 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 194 227 1.5E-8 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_17500 4c567479bef0b51010d4adce5074dc95 272 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 84 243 3.9E-70 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ambt_17500 4c567479bef0b51010d4adce5074dc95 272 Gene3D G3DSA:1.10.3130.10 2 143 3.8E-47 T 13-10-2018 ambt_17500 4c567479bef0b51010d4adce5074dc95 272 PIRSF PIRSF000441 76 271 4.3E-62 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ambt_17500 4c567479bef0b51010d4adce5074dc95 272 Pfam PF06426 Serine acetyltransferase, N-terminal 11 113 4.1E-33 T 13-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ambt_17500 4c567479bef0b51010d4adce5074dc95 272 SUPERFAMILY SSF51161 9 247 1.8E-61 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_02875 ea0e84c561c6fefb10e4d1824deda9c8 230 Pfam PF00106 short chain dehydrogenase 9 197 4.7E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02875 ea0e84c561c6fefb10e4d1824deda9c8 230 Gene3D G3DSA:3.40.50.720 4 230 1.1E-61 T 13-10-2018 ambt_02875 ea0e84c561c6fefb10e4d1824deda9c8 230 SUPERFAMILY SSF51735 7 217 1.63E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_02875 ea0e84c561c6fefb10e4d1824deda9c8 230 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_02875 ea0e84c561c6fefb10e4d1824deda9c8 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02875 ea0e84c561c6fefb10e4d1824deda9c8 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02875 ea0e84c561c6fefb10e4d1824deda9c8 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02875 ea0e84c561c6fefb10e4d1824deda9c8 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02875 ea0e84c561c6fefb10e4d1824deda9c8 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 215 2.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02875 ea0e84c561c6fefb10e4d1824deda9c8 230 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.4E-24 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_18805 a17a8e06cd42120bd1d417661770c257 1023 Gene3D G3DSA:3.20.20.140 1 246 1.0E-35 T 13-10-2018 ambt_18805 a17a8e06cd42120bd1d417661770c257 1023 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 967 2.2E-152 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_18805 a17a8e06cd42120bd1d417661770c257 1023 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 270 694 2.7E-143 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_18805 a17a8e06cd42120bd1d417661770c257 1023 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 2 1023 12.677 T 13-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_18805 a17a8e06cd42120bd1d417661770c257 1023 Pfam PF14579 Helix-hairpin-helix motif 769 855 2.3E-14 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_18805 a17a8e06cd42120bd1d417661770c257 1023 SMART SM00481 3 72 3.0E-6 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal ambt_18805 a17a8e06cd42120bd1d417661770c257 1023 Pfam PF01336 OB-fold nucleic acid binding domain 932 1004 1.1E-7 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ambt_18805 a17a8e06cd42120bd1d417661770c257 1023 Pfam PF02811 PHP domain 7 102 2.1E-10 T 13-10-2018 IPR004013 PHP domain GO:0003824 ambt_05875 886b18a59cb740f3e4329b2295f56518 297 Pfam PF11207 Protein of unknown function (DUF2989) 41 242 1.6E-67 T 13-10-2018 IPR021372 Protein of unknown function DUF2989 ambt_08330 44bcd685bc75dd6b9ae1c559343b373c 192 Gene3D G3DSA:1.20.120.1760 2 183 1.4E-18 T 13-10-2018 ambt_08330 44bcd685bc75dd6b9ae1c559343b373c 192 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 70 3.2E-16 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ambt_08330 44bcd685bc75dd6b9ae1c559343b373c 192 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 182 2.1E-50 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ambt_08330 44bcd685bc75dd6b9ae1c559343b373c 192 PIRSF PIRSF000847 1 191 1.8E-43 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ambt_08330 44bcd685bc75dd6b9ae1c559343b373c 192 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 48 70 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ambt_14025 e979a9aa7e0e2cd6d256e9b0a0d5e52e 414 Pfam PF16537 Type II secretion system protein B 351 409 1.1E-21 T 13-10-2018 IPR032389 Type II secretion system protein B ambt_14025 e979a9aa7e0e2cd6d256e9b0a0d5e52e 414 Pfam PF11871 Domain of unknown function (DUF3391) 6 61 4.4E-8 T 13-10-2018 IPR021812 Protein of unknown function DUF3391 ambt_01605 826022060768e3378cf93d36555c7cc9 443 SUPERFAMILY SSF103473 15 425 8.89E-33 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_01605 826022060768e3378cf93d36555c7cc9 443 Gene3D G3DSA:1.20.1250.20 10 228 5.8E-50 T 13-10-2018 ambt_01605 826022060768e3378cf93d36555c7cc9 443 Pfam PF07690 Major Facilitator Superfamily 19 374 1.8E-15 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_01605 826022060768e3378cf93d36555c7cc9 443 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 13 414 2.0E-133 T 13-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 ambt_01605 826022060768e3378cf93d36555c7cc9 443 Gene3D G3DSA:1.20.1250.20 232 422 3.6E-46 T 13-10-2018 ambt_11410 44c92bedfff412c6dea00e4bac22f997 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 118 128 - T 13-10-2018 IPR020549 Endoribonuclease YbeY, conserved site ambt_11410 44c92bedfff412c6dea00e4bac22f997 155 Pfam PF02130 Uncharacterized protein family UPF0054 24 147 1.2E-39 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ambt_11410 44c92bedfff412c6dea00e4bac22f997 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 44 148 1.3E-37 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ambt_11410 44c92bedfff412c6dea00e4bac22f997 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 152 23.824 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ambt_11410 44c92bedfff412c6dea00e4bac22f997 155 SUPERFAMILY SSF55486 22 154 1.38E-50 T 13-10-2018 ambt_11410 44c92bedfff412c6dea00e4bac22f997 155 Gene3D G3DSA:3.40.390.30 2 155 5.8E-54 T 13-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SMART SM00052 1248 1494 7.6E-50 T 13-10-2018 IPR001633 EAL domain ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Pfam PF13426 PAS domain 964 1063 3.8E-9 T 13-10-2018 IPR000014 PAS domain ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1078 1234 3.7E-49 T 13-10-2018 IPR000160 GGDEF domain ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Pfam PF03705 CheR methyltransferase, all-alpha domain 222 266 1.2E-9 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SMART SM00138 214 474 1.6E-54 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Gene3D G3DSA:3.30.450.20 957 1076 7.8E-26 T 13-10-2018 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Gene3D G3DSA:3.30.70.270 1077 1251 5.2E-64 T 13-10-2018 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SUPERFAMILY SSF47757 218 282 1.44E-9 T 13-10-2018 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SUPERFAMILY SSF53335 281 472 8.93E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Gene3D G3DSA:3.40.50.180 9 203 2.3E-63 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SUPERFAMILY SSF55073 1083 1239 4.24E-51 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Gene3D G3DSA:3.20.20.450 1252 1500 4.6E-60 T 13-10-2018 IPR035919 EAL domain superfamily ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Pfam PF00563 EAL domain 1254 1488 8.1E-50 T 13-10-2018 IPR001633 EAL domain ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SMART SM00267 1067 1238 2.5E-67 T 13-10-2018 IPR000160 GGDEF domain ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Pfam PF01739 CheR methyltransferase, SAM binding domain 281 466 2.3E-47 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1075 1237 6.0E-46 T 13-10-2018 IPR000160 GGDEF domain ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Pfam PF01339 CheB methylesterase 19 194 8.4E-56 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 829 952 1.1E-11 T 13-10-2018 IPR000014 PAS domain ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 957 1073 2.9E-16 T 13-10-2018 IPR000014 PAS domain ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Gene3D G3DSA:3.40.50.150 279 475 4.1E-55 T 13-10-2018 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Gene3D G3DSA:3.30.450.20 831 956 3.0E-18 T 13-10-2018 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SMART SM00091 832 898 1.1E-5 T 13-10-2018 IPR000014 PAS domain ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SMART SM00091 711 776 66.0 T 13-10-2018 IPR000014 PAS domain ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SMART SM00091 953 1019 3.9E-6 T 13-10-2018 IPR000014 PAS domain ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Gene3D G3DSA:3.30.450.20 699 830 1.2E-6 T 13-10-2018 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SUPERFAMILY SSF55785 962 1064 8.54E-22 T 13-10-2018 IPR035965 PAS domain superfamily ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 Pfam PF08448 PAS fold 840 943 2.8E-10 T 13-10-2018 IPR013656 PAS fold-4 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SUPERFAMILY SSF141868 1253 1489 2.09E-53 T 13-10-2018 IPR035919 EAL domain superfamily ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SUPERFAMILY SSF55785 816 934 5.59E-17 T 13-10-2018 IPR035965 PAS domain superfamily ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 PRINTS PR00996 Glutamate methyltransferase family signature 273 285 2.8E-24 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 PRINTS PR00996 Glutamate methyltransferase family signature 348 364 2.8E-24 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 PRINTS PR00996 Glutamate methyltransferase family signature 433 456 2.8E-24 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 PRINTS PR00996 Glutamate methyltransferase family signature 236 249 2.8E-24 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 PRINTS PR00996 Glutamate methyltransferase family signature 414 428 2.8E-24 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 PRINTS PR00996 Glutamate methyltransferase family signature 312 332 2.8E-24 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_15285 aabaa8631fb83c0454e77ab19fb3a6dd 1500 SUPERFAMILY SSF52738 16 199 1.19E-54 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 249 320 8.2E-11 T 13-10-2018 IPR001357 BRCT domain ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 SUPERFAMILY SSF50249 1 54 4.63E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 Gene3D G3DSA:1.10.150.20 87 160 2.3E-28 T 13-10-2018 ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 SMART SM00292 248 325 7.0E-9 T 13-10-2018 IPR001357 BRCT domain ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 SUPERFAMILY SSF47781 58 238 1.48E-59 T 13-10-2018 IPR010994 RuvA domain 2-like ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 Gene3D G3DSA:3.40.50.10190 240 324 5.0E-24 T 13-10-2018 IPR036420 BRCT domain superfamily ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 63 89 7.3E-11 T 13-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 Gene3D G3DSA:2.20.70.80 46 86 4.6E-19 T 13-10-2018 ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 SUPERFAMILY SSF52113 246 323 1.08E-17 T 13-10-2018 IPR036420 BRCT domain superfamily ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 1 52 1.0E-19 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 Gene3D G3DSA:2.40.50.140 1 45 1.3E-17 T 13-10-2018 ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 Gene3D G3DSA:1.10.150.20 161 239 1.8E-29 T 13-10-2018 ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 Pfam PF12826 Helix-hairpin-helix motif 165 228 4.9E-23 T 13-10-2018 ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 SMART SM00532 1 103 0.0057 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 SMART SM00278 135 154 280.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 SMART SM00278 167 186 280.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 SMART SM00278 101 120 760.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ambt_07465 d1eddcb868c644ee69a4b0489a46c1fe 326 SMART SM00278 199 218 190.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ambt_10455 778d14b5d15ddd67137036c054c8fb7f 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 9.1E-51 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 ambt_10455 778d14b5d15ddd67137036c054c8fb7f 99 SMART SM00411 3 92 6.2E-42 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_10455 778d14b5d15ddd67137036c054c8fb7f 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ambt_10455 778d14b5d15ddd67137036c054c8fb7f 99 Gene3D G3DSA:4.10.520.10 1 99 5.2E-38 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ambt_10455 778d14b5d15ddd67137036c054c8fb7f 99 SUPERFAMILY SSF47729 3 93 8.68E-32 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ambt_10455 778d14b5d15ddd67137036c054c8fb7f 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 4.7E-32 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_10455 778d14b5d15ddd67137036c054c8fb7f 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.483 T 13-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 ambt_10455 778d14b5d15ddd67137036c054c8fb7f 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_10455 778d14b5d15ddd67137036c054c8fb7f 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_10455 778d14b5d15ddd67137036c054c8fb7f 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_03185 6c4702a630670e881cbd4fe18f99ffe2 100 SUPERFAMILY SSF75169 9 99 2.02E-17 T 13-10-2018 IPR027396 DsrEFH-like ambt_03185 6c4702a630670e881cbd4fe18f99ffe2 100 Gene3D G3DSA:3.40.1260.10 2 97 1.6E-7 T 13-10-2018 IPR027396 DsrEFH-like ambt_03185 6c4702a630670e881cbd4fe18f99ffe2 100 Pfam PF02635 DsrE/DsrF-like family 7 95 1.2E-13 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein ambt_20505 de6cf7e47dbfd1b07f9fcfad4ce0688d 827 Pfam PF00593 TonB dependent receptor 370 824 4.3E-33 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_20505 de6cf7e47dbfd1b07f9fcfad4ce0688d 827 Gene3D G3DSA:2.170.130.10 113 230 1.7E-26 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_20505 de6cf7e47dbfd1b07f9fcfad4ce0688d 827 SUPERFAMILY SSF49464 23 103 2.35E-15 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ambt_20505 de6cf7e47dbfd1b07f9fcfad4ce0688d 827 SUPERFAMILY SSF56935 104 825 1.51E-91 T 13-10-2018 ambt_20505 de6cf7e47dbfd1b07f9fcfad4ce0688d 827 Pfam PF07715 TonB-dependent Receptor Plug Domain 117 222 7.8E-18 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_20505 de6cf7e47dbfd1b07f9fcfad4ce0688d 827 Gene3D G3DSA:2.60.40.1120 24 101 9.1E-12 T 13-10-2018 ambt_20505 de6cf7e47dbfd1b07f9fcfad4ce0688d 827 Pfam PF13620 Carboxypeptidase regulatory-like domain 24 98 8.7E-15 T 13-10-2018 ambt_04665 f6f4266e3651715d1d978279d2d0060c 362 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 12 357 51.932 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ambt_04665 f6f4266e3651715d1d978279d2d0060c 362 SUPERFAMILY SSF53383 18 356 4.49E-68 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_04665 f6f4266e3651715d1d978279d2d0060c 362 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 213 222 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ambt_04665 f6f4266e3651715d1d978279d2d0060c 362 Gene3D G3DSA:3.90.1150.10 12 349 8.6E-122 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_04665 f6f4266e3651715d1d978279d2d0060c 362 Pfam PF00155 Aminotransferase class I and II 50 351 1.2E-52 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ambt_04665 f6f4266e3651715d1d978279d2d0060c 362 Gene3D G3DSA:3.40.640.10 57 260 8.6E-122 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_04665 f6f4266e3651715d1d978279d2d0060c 362 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 16 355 9.1E-106 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ambt_19880 7d185acc8df39ae8661e5e44f7a2306f 160 Gene3D G3DSA:3.40.50.300 6 159 4.1E-44 T 13-10-2018 ambt_19880 7d185acc8df39ae8661e5e44f7a2306f 160 SUPERFAMILY SSF52540 36 134 7.65E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19880 7d185acc8df39ae8661e5e44f7a2306f 160 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 20 145 4.6E-45 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ambt_19880 7d185acc8df39ae8661e5e44f7a2306f 160 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 133 1.7E-38 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ambt_07655 92c8e8bbdd54f54d05b8e5c55fffa2a5 673 SUPERFAMILY SSF51445 161 570 1.99E-98 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_07655 92c8e8bbdd54f54d05b8e5c55fffa2a5 673 Gene3D G3DSA:2.60.40.1180 609 672 1.1E-5 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta ambt_07655 92c8e8bbdd54f54d05b8e5c55fffa2a5 673 Pfam PF10438 Cyclo-malto-dextrinase C-terminal domain 572 670 4.2E-28 T 13-10-2018 IPR019492 Cyclo-malto-dextrinase, C-terminal ambt_07655 92c8e8bbdd54f54d05b8e5c55fffa2a5 673 SUPERFAMILY SSF51011 573 670 1.7E-5 T 13-10-2018 ambt_07655 92c8e8bbdd54f54d05b8e5c55fffa2a5 673 SMART SM00642 164 561 5.6E-59 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_07655 92c8e8bbdd54f54d05b8e5c55fffa2a5 673 Gene3D G3DSA:3.20.20.80 152 570 3.2E-134 T 13-10-2018 ambt_07655 92c8e8bbdd54f54d05b8e5c55fffa2a5 673 Gene3D G3DSA:2.60.40.10 57 145 9.7E-21 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_07655 92c8e8bbdd54f54d05b8e5c55fffa2a5 673 Pfam PF09087 Cyclomaltodextrinase, N-terminal 62 147 3.6E-24 T 13-10-2018 IPR015171 Cyclomaltodextrinase, N-terminal ambt_07655 92c8e8bbdd54f54d05b8e5c55fffa2a5 673 Pfam PF00128 Alpha amylase, catalytic domain 198 515 7.3E-52 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_07655 92c8e8bbdd54f54d05b8e5c55fffa2a5 673 SUPERFAMILY SSF81296 60 147 7.98E-22 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_16275 ec82532669212fa9e748affce92a982b 1043 Pfam PF01627 Hpt domain 954 1034 1.5E-12 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_16275 ec82532669212fa9e748affce92a982b 1043 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 596 1.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16275 ec82532669212fa9e748affce92a982b 1043 PRINTS PR00344 Bacterial sensor protein C-terminal signature 641 654 1.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16275 ec82532669212fa9e748affce92a982b 1043 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 635 1.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16275 ec82532669212fa9e748affce92a982b 1043 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 610 1.9E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16275 ec82532669212fa9e748affce92a982b 1043 Gene3D G3DSA:3.30.565.10 494 660 2.9E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_16275 ec82532669212fa9e748affce92a982b 1043 SUPERFAMILY SSF47384 417 496 7.85E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_16275 ec82532669212fa9e748affce92a982b 1043 SMART SM00387 541 657 1.5E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_16275 ec82532669212fa9e748affce92a982b 1043 Gene3D G3DSA:1.10.287.130 386 493 4.7E-26 T 13-10-2018 ambt_16275 ec82532669212fa9e748affce92a982b 1043 Pfam PF00512 His Kinase A (phospho-acceptor) domain 431 495 8.8E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_16275 ec82532669212fa9e748affce92a982b 1043 SMART SM00073 945 1042 1.2E-4 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_16275 ec82532669212fa9e748affce92a982b 1043 SUPERFAMILY SSF47226 902 1034 1.96E-21 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_16275 ec82532669212fa9e748affce92a982b 1043 Gene3D G3DSA:1.20.120.160 933 1041 7.5E-26 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_16275 ec82532669212fa9e748affce92a982b 1043 Pfam PF07695 7TM diverse intracellular signalling 182 386 3.6E-39 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 ambt_16275 ec82532669212fa9e748affce92a982b 1043 SUPERFAMILY SSF55874 484 653 1.19E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_16275 ec82532669212fa9e748affce92a982b 1043 Pfam PF00072 Response regulator receiver domain 808 919 8.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_16275 ec82532669212fa9e748affce92a982b 1043 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 541 654 1.2E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_16275 ec82532669212fa9e748affce92a982b 1043 Gene3D G3DSA:2.60.40.2380 37 170 2.4E-13 T 13-10-2018 ambt_16275 ec82532669212fa9e748affce92a982b 1043 SMART SM00388 430 495 1.3E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_16275 ec82532669212fa9e748affce92a982b 1043 SMART SM00448 806 919 1.8E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_16275 ec82532669212fa9e748affce92a982b 1043 SUPERFAMILY SSF52172 804 925 3.42E-34 T 13-10-2018 IPR011006 CheY-like superfamily ambt_16275 ec82532669212fa9e748affce92a982b 1043 Gene3D G3DSA:3.40.50.2300 805 929 6.4E-36 T 13-10-2018 ambt_16275 ec82532669212fa9e748affce92a982b 1043 Pfam PF07696 7TMR-DISM extracellular 2 42 168 5.7E-22 T 13-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 ambt_00135 3a05a048da62c80392cf4908794aa466 314 PRINTS PR00073 Coprogen oxidase signature 62 83 1.7E-85 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 PRINTS PR00073 Coprogen oxidase signature 248 275 1.7E-85 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 PRINTS PR00073 Coprogen oxidase signature 45 61 1.7E-85 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 PRINTS PR00073 Coprogen oxidase signature 139 161 1.7E-85 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 PRINTS PR00073 Coprogen oxidase signature 104 128 1.7E-85 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 PRINTS PR00073 Coprogen oxidase signature 276 302 1.7E-85 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 PRINTS PR00073 Coprogen oxidase signature 176 205 1.7E-85 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 Pfam PF01218 Coproporphyrinogen III oxidase 22 314 1.1E-132 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 180 204 - T 13-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 17 291 56.712 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 SUPERFAMILY SSF102886 19 310 2.09E-138 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 Gene3D G3DSA:3.40.1500.10 10 314 2.0E-137 T 13-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_00135 3a05a048da62c80392cf4908794aa466 314 PIRSF PIRSF000166 2 314 1.3E-128 T 13-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ambt_14855 0a82102f29a2c6d79418e286cefd69ea 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 513 1.1E-18 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ambt_14855 0a82102f29a2c6d79418e286cefd69ea 522 Gene3D G3DSA:3.40.50.12780 2 427 2.2E-108 T 13-10-2018 ambt_14855 0a82102f29a2c6d79418e286cefd69ea 522 Pfam PF00501 AMP-binding enzyme 18 431 3.2E-97 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ambt_14855 0a82102f29a2c6d79418e286cefd69ea 522 Gene3D G3DSA:3.30.300.310 428 522 1.4E-31 T 13-10-2018 ambt_14855 0a82102f29a2c6d79418e286cefd69ea 522 SUPERFAMILY SSF56801 6 521 2.35E-140 T 13-10-2018 ambt_14855 0a82102f29a2c6d79418e286cefd69ea 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 13-10-2018 IPR020845 AMP-binding, conserved site ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 SUPERFAMILY SSF53738 6 206 6.67E-35 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 SUPERFAMILY SSF53738 182 290 7.46E-27 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 292 401 5.7E-23 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 407 481 1.3E-8 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 Gene3D G3DSA:3.30.310.50 403 485 1.2E-25 T 13-10-2018 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 183 287 5.2E-19 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 Gene3D G3DSA:3.40.120.10 4 146 6.8E-50 T 13-10-2018 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 92 106 8.6E-28 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 199 218 8.6E-28 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 267 282 8.6E-28 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 251 8.6E-28 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 Gene3D G3DSA:3.40.120.10 201 283 5.0E-28 T 13-10-2018 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 SUPERFAMILY SSF55957 403 485 9.77E-18 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 Gene3D G3DSA:3.40.120.10 284 400 1.2E-32 T 13-10-2018 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 93 102 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 135 8.4E-33 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07540 42bf6be9682d5b4984f39833f81ab316 486 SUPERFAMILY SSF53738 292 396 4.32E-29 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_12520 0791ccb26c84adf22148dfcacc3b1525 866 Pfam PF12838 4Fe-4S dicluster domain 384 436 1.3E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ambt_12520 0791ccb26c84adf22148dfcacc3b1525 866 Pfam PF10531 SLBB domain 301 352 6.3E-11 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_12520 0791ccb26c84adf22148dfcacc3b1525 866 SUPERFAMILY SSF142019 100 308 4.84E-62 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_12520 0791ccb26c84adf22148dfcacc3b1525 866 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 18 452 2.4E-181 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 ambt_12520 0791ccb26c84adf22148dfcacc3b1525 866 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 423 434 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ambt_12520 0791ccb26c84adf22148dfcacc3b1525 866 Pfam PF13375 RnfC Barrel sandwich hybrid domain 20 120 3.3E-29 T 13-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain ambt_12520 0791ccb26c84adf22148dfcacc3b1525 866 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 798 213.528 T 13-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 ambt_12520 0791ccb26c84adf22148dfcacc3b1525 866 Gene3D G3DSA:3.40.50.11540 150 297 7.6E-12 T 13-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_12520 0791ccb26c84adf22148dfcacc3b1525 866 SUPERFAMILY SSF46548 341 451 4.71E-21 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ambt_12520 0791ccb26c84adf22148dfcacc3b1525 866 Gene3D G3DSA:1.10.1060.10 370 451 2.1E-11 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ambt_12520 0791ccb26c84adf22148dfcacc3b1525 866 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 146 288 1.2E-47 T 13-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_11445 b36d4fed9ccbb33342b5ff3829bb3abd 181 Gene3D G3DSA:3.90.79.10 1 178 5.5E-41 T 13-10-2018 ambt_11445 b36d4fed9ccbb33342b5ff3829bb3abd 181 SUPERFAMILY SSF55811 6 179 7.99E-37 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ambt_11445 b36d4fed9ccbb33342b5ff3829bb3abd 181 Pfam PF00293 NUDIX domain 48 149 4.6E-6 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ambt_15485 e9359a16076cfc92bdd8bfc36f3ca2a2 157 Gene3D G3DSA:3.30.1330.50 1 157 6.2E-69 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ambt_15485 e9359a16076cfc92bdd8bfc36f3ca2a2 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 35.855 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ambt_15485 e9359a16076cfc92bdd8bfc36f3ca2a2 157 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 8.9E-70 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ambt_15485 e9359a16076cfc92bdd8bfc36f3ca2a2 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ambt_15485 e9359a16076cfc92bdd8bfc36f3ca2a2 157 SUPERFAMILY SSF69765 1 156 9.29E-66 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ambt_15485 e9359a16076cfc92bdd8bfc36f3ca2a2 157 Pfam PF02542 YgbB family 1 155 1.2E-66 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ambt_13605 03a0ba1cc664ea224b46ffe8975a9e20 180 SUPERFAMILY SSF53927 4 163 5.02E-58 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ambt_13605 03a0ba1cc664ea224b46ffe8975a9e20 180 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 63 100 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ambt_13605 03a0ba1cc664ea224b46ffe8975a9e20 180 Pfam PF14437 MafB19-like deaminase 13 159 1.4E-34 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 ambt_13605 03a0ba1cc664ea224b46ffe8975a9e20 180 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 18 159 44.601 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 ambt_13605 03a0ba1cc664ea224b46ffe8975a9e20 180 Gene3D G3DSA:3.40.140.10 7 173 7.1E-63 T 13-10-2018 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 Gene3D G3DSA:3.30.2090.10 178 274 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 SUPERFAMILY SSF82693 139 329 1.91E-21 T 13-10-2018 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 Pfam PF00873 AcrB/AcrD/AcrF family 1 1023 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 SUPERFAMILY SSF82714 182 271 4.58E-23 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 SUPERFAMILY SSF82693 38 131 1.52E-26 T 13-10-2018 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 Gene3D G3DSA:3.30.70.1430 566 666 0.0 T 13-10-2018 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 Gene3D G3DSA:3.30.70.1440 667 863 0.0 T 13-10-2018 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 Gene3D G3DSA:3.30.70.1430 38 815 0.0 T 13-10-2018 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 Gene3D G3DSA:3.30.2090.10 719 807 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 Gene3D G3DSA:3.30.70.1320 132 331 0.0 T 13-10-2018 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1030 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 Gene3D G3DSA:1.20.1640.10 512 1020 0.0 T 13-10-2018 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 SUPERFAMILY SSF82866 295 496 4.84E-47 T 13-10-2018 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 SUPERFAMILY SSF82866 803 1027 4.05E-46 T 13-10-2018 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 6.0E-105 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 6.0E-105 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 PRINTS PR00702 Acriflavin resistance protein family signature 620 634 6.0E-105 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 6.0E-105 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.0E-105 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 6.0E-105 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 6.0E-105 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 6.0E-105 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.0E-105 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 SUPERFAMILY SSF82714 720 807 2.75E-23 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 SUPERFAMILY SSF82693 564 667 1.36E-26 T 13-10-2018 ambt_18185 8f60156c6698ebc2b483c67e061d98d7 1032 Gene3D G3DSA:1.20.1640.10 8 511 0.0 T 13-10-2018 ambt_21365 17617474aa06b8062b4ccd8fecdc46e8 299 SUPERFAMILY SSF118352 233 289 1.03E-17 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 ambt_21365 17617474aa06b8062b4ccd8fecdc46e8 299 Gene3D G3DSA:1.10.287.480 185 232 6.0E-19 T 13-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily ambt_21365 17617474aa06b8062b4ccd8fecdc46e8 299 Pfam PF01430 Hsp33 protein 5 280 1.0E-79 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 ambt_21365 17617474aa06b8062b4ccd8fecdc46e8 299 PIRSF PIRSF005261 1 291 3.9E-71 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 ambt_21365 17617474aa06b8062b4ccd8fecdc46e8 299 Gene3D G3DSA:3.90.1280.10 233 291 3.9E-20 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 ambt_21365 17617474aa06b8062b4ccd8fecdc46e8 299 SUPERFAMILY SSF64397 5 239 1.14E-62 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 ambt_21365 17617474aa06b8062b4ccd8fecdc46e8 299 Gene3D G3DSA:3.55.30.10 1 178 2.0E-57 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 ambt_00335 fcd27b989249bee3e3e9f46b3f2c23c5 319 Pfam PF00072 Response regulator receiver domain 17 126 5.0E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_00335 fcd27b989249bee3e3e9f46b3f2c23c5 319 SUPERFAMILY SSF55073 148 305 2.28E-42 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_00335 fcd27b989249bee3e3e9f46b3f2c23c5 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 139 305 3.9E-43 T 13-10-2018 IPR000160 GGDEF domain ambt_00335 fcd27b989249bee3e3e9f46b3f2c23c5 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 302 1.3E-41 T 13-10-2018 IPR000160 GGDEF domain ambt_00335 fcd27b989249bee3e3e9f46b3f2c23c5 319 SMART SM00448 14 126 1.7E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_00335 fcd27b989249bee3e3e9f46b3f2c23c5 319 SUPERFAMILY SSF52172 13 141 1.42E-35 T 13-10-2018 IPR011006 CheY-like superfamily ambt_00335 fcd27b989249bee3e3e9f46b3f2c23c5 319 SMART SM00267 132 307 3.3E-49 T 13-10-2018 IPR000160 GGDEF domain ambt_00335 fcd27b989249bee3e3e9f46b3f2c23c5 319 Gene3D G3DSA:3.30.70.270 136 306 4.0E-50 T 13-10-2018 ambt_00335 fcd27b989249bee3e3e9f46b3f2c23c5 319 Gene3D G3DSA:3.40.50.2300 2 135 6.2E-37 T 13-10-2018 ambt_03935 555982aba0e61f70c87b1802c5a276a1 118 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 13 117 1.1E-23 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 ambt_03935 555982aba0e61f70c87b1802c5a276a1 118 Pfam PF01521 Iron-sulphur cluster biosynthesis 13 113 2.0E-15 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 ambt_03935 555982aba0e61f70c87b1802c5a276a1 118 Gene3D G3DSA:2.60.300.12 12 118 2.6E-25 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ambt_03935 555982aba0e61f70c87b1802c5a276a1 118 SUPERFAMILY SSF89360 12 105 4.9E-18 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ambt_15110 f5ac0ac06eea24fbbcd9af3723923d60 642 Pfam PF00593 TonB dependent receptor 202 640 7.9E-39 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_15110 f5ac0ac06eea24fbbcd9af3723923d60 642 Gene3D G3DSA:2.40.170.20 164 641 3.9E-85 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_15110 f5ac0ac06eea24fbbcd9af3723923d60 642 Gene3D G3DSA:2.170.130.10 32 158 2.4E-30 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_15110 f5ac0ac06eea24fbbcd9af3723923d60 642 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 40 - T 13-10-2018 IPR010916 TonB box, conserved site ambt_15110 f5ac0ac06eea24fbbcd9af3723923d60 642 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 153 3.7E-25 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_15110 f5ac0ac06eea24fbbcd9af3723923d60 642 SUPERFAMILY SSF56935 33 640 2.26E-105 T 13-10-2018 ambt_07510 06d842bc49e686bdb722ecad528de837 480 Gene3D G3DSA:2.40.50.140 409 477 5.8E-15 T 13-10-2018 ambt_07510 06d842bc49e686bdb722ecad528de837 480 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 37 469 61.678 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 ambt_07510 06d842bc49e686bdb722ecad528de837 480 Gene3D G3DSA:3.40.50.12160 37 165 1.5E-30 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily ambt_07510 06d842bc49e686bdb722ecad528de837 480 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 39 466 1.3E-103 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 ambt_07510 06d842bc49e686bdb722ecad528de837 480 Pfam PF04055 Radical SAM superfamily 175 352 2.6E-30 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_07510 06d842bc49e686bdb722ecad528de837 480 SUPERFAMILY SSF102114 150 400 1.7E-54 T 13-10-2018 ambt_07510 06d842bc49e686bdb722ecad528de837 480 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 173 193 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ambt_07510 06d842bc49e686bdb722ecad528de837 480 SMART SM00729 169 394 6.4E-55 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ambt_07510 06d842bc49e686bdb722ecad528de837 480 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 38 466 1.4E-179 T 13-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 ambt_07510 06d842bc49e686bdb722ecad528de837 480 Gene3D G3DSA:3.80.30.20 167 408 6.6E-74 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ambt_07510 06d842bc49e686bdb722ecad528de837 480 Pfam PF00919 Uncharacterized protein family UPF0004 38 129 1.3E-21 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 ambt_05990 56370704bd420376573f34ad0e1366fd 137 SUPERFAMILY SSF52821 21 129 4.39E-21 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_05990 56370704bd420376573f34ad0e1366fd 137 Pfam PF00581 Rhodanese-like domain 41 130 1.5E-7 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_05990 56370704bd420376573f34ad0e1366fd 137 Gene3D G3DSA:3.40.250.10 36 136 3.6E-17 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_05990 56370704bd420376573f34ad0e1366fd 137 SMART SM00450 40 137 4.6E-7 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_17880 98eaae2c65fde9a7387036dbd64b37a4 204 SUPERFAMILY SSF52833 3 192 8.31E-24 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_17880 98eaae2c65fde9a7387036dbd64b37a4 204 Pfam PF01323 DSBA-like thioredoxin domain 3 191 3.1E-44 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 ambt_17880 98eaae2c65fde9a7387036dbd64b37a4 204 PIRSF PIRSF006386 1 202 8.4E-56 T 13-10-2018 IPR014440 HCCA isomerase/glutathione S-transferase kappa Reactome: R-HSA-156590|Reactome: R-HSA-9033241 ambt_17880 98eaae2c65fde9a7387036dbd64b37a4 204 Gene3D G3DSA:3.40.30.10 1 202 4.1E-52 T 13-10-2018 ambt_16545 e2cd8d2793c3d003e85a143b3ca1307d 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16545 e2cd8d2793c3d003e85a143b3ca1307d 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 13-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16545 e2cd8d2793c3d003e85a143b3ca1307d 103 SUPERFAMILY SSF54999 5 101 4.05E-37 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily ambt_16545 e2cd8d2793c3d003e85a143b3ca1307d 103 Gene3D G3DSA:3.30.70.600 1 103 3.1E-38 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily ambt_16545 e2cd8d2793c3d003e85a143b3ca1307d 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.2E-47 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16545 e2cd8d2793c3d003e85a143b3ca1307d 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.5E-19 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16545 e2cd8d2793c3d003e85a143b3ca1307d 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.5E-19 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16545 e2cd8d2793c3d003e85a143b3ca1307d 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.5E-19 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16545 e2cd8d2793c3d003e85a143b3ca1307d 103 SMART SM01403 7 101 2.8E-57 T 13-10-2018 IPR027486 Ribosomal protein S10 domain ambt_16545 e2cd8d2793c3d003e85a143b3ca1307d 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 4.7E-36 T 13-10-2018 IPR027486 Ribosomal protein S10 domain ambt_11625 156f3103d64a4061ef1939ee245ffca4 214 Gene3D G3DSA:1.10.10.10 3 85 3.0E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_11625 156f3103d64a4061ef1939ee245ffca4 214 SUPERFAMILY SSF46785 89 163 3.26E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_11625 156f3103d64a4061ef1939ee245ffca4 214 SUPERFAMILY SSF46785 4 86 4.9E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_11625 156f3103d64a4061ef1939ee245ffca4 214 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 9 178 4.8E-34 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ambt_11625 156f3103d64a4061ef1939ee245ffca4 214 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 171 2.7E-52 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ambt_11625 156f3103d64a4061ef1939ee245ffca4 214 PIRSF PIRSF019345 1 211 2.1E-59 T 13-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ambt_11625 156f3103d64a4061ef1939ee245ffca4 214 Gene3D G3DSA:1.10.10.10 86 183 1.8E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_11800 9fe8e03c25c17062614a1ed07ce9bdfd 257 Pfam PF00005 ABC transporter 16 161 3.3E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_11800 9fe8e03c25c17062614a1ed07ce9bdfd 257 SMART SM00382 25 240 1.9E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_11800 9fe8e03c25c17062614a1ed07ce9bdfd 257 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_11800 9fe8e03c25c17062614a1ed07ce9bdfd 257 Gene3D G3DSA:3.40.50.300 3 247 1.2E-48 T 13-10-2018 ambt_11800 9fe8e03c25c17062614a1ed07ce9bdfd 257 SUPERFAMILY SSF52540 3 229 3.45E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15075 db83ccca49d601b48330aacf57a7effa 249 Gene3D G3DSA:3.40.50.720 4 249 1.2E-67 T 13-10-2018 ambt_15075 db83ccca49d601b48330aacf57a7effa 249 SUPERFAMILY SSF51735 7 248 1.54E-66 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_15075 db83ccca49d601b48330aacf57a7effa 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 4.2E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_15075 db83ccca49d601b48330aacf57a7effa 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 4.2E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_15075 db83ccca49d601b48330aacf57a7effa 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 4.2E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_15075 db83ccca49d601b48330aacf57a7effa 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.2E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_15075 db83ccca49d601b48330aacf57a7effa 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 4.2E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_15075 db83ccca49d601b48330aacf57a7effa 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 4.2E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_15075 db83ccca49d601b48330aacf57a7effa 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 247 8.5E-51 T 13-10-2018 ambt_14580 63ef9d74cb62217c5d3bf1d21380125e 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 313 4.1E-106 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 ambt_14580 63ef9d74cb62217c5d3bf1d21380125e 324 SUPERFAMILY SSF53697 9 319 5.34E-69 T 13-10-2018 ambt_14580 63ef9d74cb62217c5d3bf1d21380125e 324 Pfam PF01380 SIS domain 44 172 1.0E-32 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ambt_14580 63ef9d74cb62217c5d3bf1d21380125e 324 SMART SM00116 275 323 55.0 T 13-10-2018 IPR000644 CBS domain ambt_14580 63ef9d74cb62217c5d3bf1d21380125e 324 SMART SM00116 210 258 0.0062 T 13-10-2018 IPR000644 CBS domain ambt_14580 63ef9d74cb62217c5d3bf1d21380125e 324 Gene3D G3DSA:3.10.580.10 196 321 4.3E-41 T 13-10-2018 ambt_14580 63ef9d74cb62217c5d3bf1d21380125e 324 PIRSF PIRSF004692 1 324 6.9E-130 T 13-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 ambt_14580 63ef9d74cb62217c5d3bf1d21380125e 324 Gene3D G3DSA:3.40.50.10490 2 195 1.6E-66 T 13-10-2018 ambt_14580 63ef9d74cb62217c5d3bf1d21380125e 324 Pfam PF00571 CBS domain 268 320 0.0045 T 13-10-2018 IPR000644 CBS domain ambt_14580 63ef9d74cb62217c5d3bf1d21380125e 324 Pfam PF00571 CBS domain 201 257 4.6E-5 T 13-10-2018 IPR000644 CBS domain ambt_06475 96bc4603894a73543baa593eab9f9206 174 Pfam PF01967 MoaC family 15 150 2.4E-51 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_06475 96bc4603894a73543baa593eab9f9206 174 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 33.785 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_06475 96bc4603894a73543baa593eab9f9206 174 SUPERFAMILY SSF55040 11 155 1.96E-57 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_06475 96bc4603894a73543baa593eab9f9206 174 Gene3D G3DSA:3.30.70.640 1 161 1.2E-65 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_06475 96bc4603894a73543baa593eab9f9206 174 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 151 4.1E-59 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_05165 b0df97863d0e01550eadfa203a403df4 206 Pfam PF07290 Protein of unknown function (DUF1449) 10 205 4.1E-77 T 13-10-2018 IPR010840 Protein of unknown function DUF1449 ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 SUPERFAMILY SSF52540 312 513 2.86E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 Pfam PF00005 ABC transporter 336 469 2.8E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 Gene3D G3DSA:3.40.50.300 281 552 1.1E-60 T 13-10-2018 ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 Pfam PF12848 ABC transporter 224 296 4.2E-13 T 13-10-2018 IPR032781 ABC-transporter extension domain ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 SUPERFAMILY SSF52540 3 243 6.78E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 Gene3D G3DSA:3.40.50.300 2 279 3.2E-67 T 13-10-2018 ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 Pfam PF16326 ABC transporter C-terminal domain 570 638 1.4E-17 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 Gene3D G3DSA:1.10.287.380 560 643 3.1E-23 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 SMART SM00382 344 515 6.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 SMART SM00382 28 230 3.8E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_08090 07d8a70c817d6f16c1d16e5bb565e6a0 645 Pfam PF00005 ABC transporter 19 185 2.5E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_15560 58f73e1455ee4f66ab807812d1dc6a17 696 Pfam PF01464 Transglycosylase SLT domain 522 623 1.1E-22 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 ambt_15560 58f73e1455ee4f66ab807812d1dc6a17 696 Gene3D G3DSA:1.10.530.10 511 674 6.7E-42 T 13-10-2018 ambt_15560 58f73e1455ee4f66ab807812d1dc6a17 696 SUPERFAMILY SSF48435 77 515 4.45E-103 T 13-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 ambt_15560 58f73e1455ee4f66ab807812d1dc6a17 696 Pfam PF14718 Soluble lytic murein transglycosylase L domain 444 510 7.6E-20 T 13-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 ambt_15560 58f73e1455ee4f66ab807812d1dc6a17 696 SUPERFAMILY SSF53955 518 670 5.16E-40 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily ambt_15560 58f73e1455ee4f66ab807812d1dc6a17 696 Gene3D G3DSA:1.25.20.10 62 425 1.6E-91 T 13-10-2018 ambt_03125 3a16b91a54309b80fcc35eb4769e0459 187 Gene3D G3DSA:3.15.10.40 13 181 1.4E-34 T 13-10-2018 ambt_03125 3a16b91a54309b80fcc35eb4769e0459 187 Pfam PF07273 Protein of unknown function (DUF1439) 26 176 6.6E-42 T 13-10-2018 IPR010835 Protein of unknown function DUF1439 ambt_12600 5017e86beeb041d6ed93e4f3b5bd65dd 201 Pfam PF00578 AhpC/TSA family 5 140 4.2E-34 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ambt_12600 5017e86beeb041d6ed93e4f3b5bd65dd 201 PIRSF PIRSF000239 1 200 1.0E-57 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ambt_12600 5017e86beeb041d6ed93e4f3b5bd65dd 201 SUPERFAMILY SSF52833 3 195 1.2E-66 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_12600 5017e86beeb041d6ed93e4f3b5bd65dd 201 Gene3D G3DSA:3.40.30.10 1 197 1.3E-73 T 13-10-2018 ambt_12600 5017e86beeb041d6ed93e4f3b5bd65dd 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 161 194 1.7E-8 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Pfam PF00271 Helicase conserved C-terminal domain 829 931 2.7E-15 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_10405 985dadc09d87a686d291480dfcd28375 1172 SMART SM00487 622 812 4.5E-34 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Pfam PF00270 DEAD/DEAH box helicase 627 787 1.1E-20 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Gene3D G3DSA:3.40.50.11180 30 351 3.5E-119 T 13-10-2018 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Gene3D G3DSA:3.30.2060.10 146 231 3.5E-119 T 13-10-2018 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 SMART SM00490 848 932 1.2E-15 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Gene3D G3DSA:3.40.50.11140 371 474 2.0E-10 T 13-10-2018 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Gene3D G3DSA:2.30.30.840 505 563 1.5E-233 T 13-10-2018 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 SUPERFAMILY SSF52540 805 1012 4.46E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Pfam PF02559 CarD-like/TRCF domain 502 597 1.8E-24 T 13-10-2018 IPR003711 CarD-like/TRCF domain ambt_10405 985dadc09d87a686d291480dfcd28375 1172 SUPERFAMILY SSF141259 492 570 4.71E-23 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily ambt_10405 985dadc09d87a686d291480dfcd28375 1172 SMART SM01058 501 598 6.0E-47 T 13-10-2018 IPR003711 CarD-like/TRCF domain ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 41 1149 27.739 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Gene3D G3DSA:3.40.50.300 564 803 1.5E-233 T 13-10-2018 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Pfam PF03461 TRCF domain 1031 1122 4.7E-28 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 SUPERFAMILY SSF143517 1017 1168 1.83E-41 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Gene3D G3DSA:3.90.1150.50 1026 1171 1.2E-44 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain ambt_10405 985dadc09d87a686d291480dfcd28375 1172 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 163 1103 0.0 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 SMART SM00982 1030 1130 6.2E-49 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 SUPERFAMILY SSF52540 20 357 1.33E-97 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_10405 985dadc09d87a686d291480dfcd28375 1172 Gene3D G3DSA:3.40.50.300 500 1012 1.5E-233 T 13-10-2018 ambt_10405 985dadc09d87a686d291480dfcd28375 1172 SUPERFAMILY SSF52540 367 487 3.98E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_10405 985dadc09d87a686d291480dfcd28375 1172 SUPERFAMILY SSF52540 545 805 6.32E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19140 21c152c1bacf82137aeacf53efa331ff 245 SUPERFAMILY SSF55315 2 78 7.65E-19 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like ambt_19140 21c152c1bacf82137aeacf53efa331ff 245 Gene3D G3DSA:3.40.1280.10 80 245 7.3E-64 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ambt_19140 21c152c1bacf82137aeacf53efa331ff 245 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 80 3.7E-17 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ambt_19140 21c152c1bacf82137aeacf53efa331ff 245 SMART SM00967 6 82 1.5E-16 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ambt_19140 21c152c1bacf82137aeacf53efa331ff 245 Pfam PF00588 SpoU rRNA Methylase family 98 238 2.4E-41 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ambt_19140 21c152c1bacf82137aeacf53efa331ff 245 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 244 4.0E-83 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 ambt_19140 21c152c1bacf82137aeacf53efa331ff 245 SUPERFAMILY SSF75217 71 245 3.92E-50 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases ambt_19140 21c152c1bacf82137aeacf53efa331ff 245 Gene3D G3DSA:3.30.1330.30 1 78 7.8E-27 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like ambt_19140 21c152c1bacf82137aeacf53efa331ff 245 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 245 43.36 T 13-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 Gene3D G3DSA:1.10.520.10 25 436 6.1E-217 T 13-10-2018 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 Gene3D G3DSA:1.10.420.20 195 403 6.1E-217 T 13-10-2018 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 Pfam PF00141 Peroxidase 410 702 8.3E-31 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 Pfam PF00141 Peroxidase 85 402 4.4E-50 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 Gene3D G3DSA:1.10.520.10 438 727 2.8E-137 T 13-10-2018 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 Hamap MF_01961 Catalase-peroxidase [katG]. 11 728 38.693 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 ProSitePatterns PS00436 Peroxidases active site signature. 94 105 - T 13-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 SUPERFAMILY SSF48113 23 435 1.92E-149 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 56 69 3.7E-52 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 71 96 3.7E-52 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 482 508 3.7E-52 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 30 52 3.7E-52 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 271 294 3.7E-52 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 Gene3D G3DSA:1.10.420.10 582 703 2.8E-137 T 13-10-2018 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 PRINTS PR00458 Haem peroxidase superfamily signature 94 108 7.1E-18 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 PRINTS PR00458 Haem peroxidase superfamily signature 154 171 7.1E-18 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 PRINTS PR00458 Haem peroxidase superfamily signature 172 184 7.1E-18 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 PRINTS PR00458 Haem peroxidase superfamily signature 263 278 7.1E-18 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 PRINTS PR00458 Haem peroxidase superfamily signature 322 337 7.1E-18 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 14 728 0.0 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00425 3444e58f649da1b143dbb72e113f1c5e 729 SUPERFAMILY SSF48113 436 727 1.39E-100 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_14750 ff1f4b9b5dea25af1fddd2213ef91603 245 SUPERFAMILY SSF63892 4 241 4.71E-100 T 13-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ambt_14750 ff1f4b9b5dea25af1fddd2213ef91603 245 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 129.051 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ambt_14750 ff1f4b9b5dea25af1fddd2213ef91603 245 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 3.6E-97 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ambt_14750 ff1f4b9b5dea25af1fddd2213ef91603 245 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.3E-102 T 13-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ambt_14750 ff1f4b9b5dea25af1fddd2213ef91603 245 Gene3D G3DSA:3.20.20.70 1 244 4.3E-106 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_04625 a732ec7da170c8f9491ae4d36d0c9b42 94 SMART SM00530 35 89 1.2E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_04625 a732ec7da170c8f9491ae4d36d0c9b42 94 Gene3D G3DSA:1.10.260.40 35 94 7.7E-20 T 13-10-2018 ambt_04625 a732ec7da170c8f9491ae4d36d0c9b42 94 SUPERFAMILY SSF47413 36 82 1.1E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_04625 a732ec7da170c8f9491ae4d36d0c9b42 94 Pfam PF01381 Helix-turn-helix 38 76 2.7E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_18530 a47754a7456f76dbffb15c6ddb7ae2a9 354 Pfam PF13533 Biotin-lipoyl like 48 92 5.5E-9 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ambt_18530 a47754a7456f76dbffb15c6ddb7ae2a9 354 Gene3D G3DSA:2.40.50.100 46 78 1.7E-9 T 13-10-2018 ambt_18530 a47754a7456f76dbffb15c6ddb7ae2a9 354 Pfam PF13437 HlyD family secretion protein 213 318 1.3E-13 T 13-10-2018 ambt_18530 a47754a7456f76dbffb15c6ddb7ae2a9 354 SUPERFAMILY SSF111369 182 264 6.93E-8 T 13-10-2018 ambt_18530 a47754a7456f76dbffb15c6ddb7ae2a9 354 SUPERFAMILY SSF111369 39 100 2.88E-6 T 13-10-2018 ambt_18530 a47754a7456f76dbffb15c6ddb7ae2a9 354 Gene3D G3DSA:1.10.287.470 79 104 1.7E-9 T 13-10-2018 ambt_18530 a47754a7456f76dbffb15c6ddb7ae2a9 354 Gene3D G3DSA:2.40.50.100 213 247 6.2E-15 T 13-10-2018 ambt_18530 a47754a7456f76dbffb15c6ddb7ae2a9 354 Gene3D G3DSA:2.40.30.170 248 299 6.2E-15 T 13-10-2018 ambt_18530 a47754a7456f76dbffb15c6ddb7ae2a9 354 Gene3D G3DSA:1.10.287.470 182 212 6.2E-15 T 13-10-2018 ambt_18530 a47754a7456f76dbffb15c6ddb7ae2a9 354 SUPERFAMILY SSF111369 116 174 1.14E-5 T 13-10-2018 ambt_18530 a47754a7456f76dbffb15c6ddb7ae2a9 354 Gene3D G3DSA:1.10.287.470 113 177 2.3E-6 T 13-10-2018 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01180 Arginine decarboxylase signature 539 560 1.0E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01180 Arginine decarboxylase signature 90 104 1.0E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01180 Arginine decarboxylase signature 146 161 1.0E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01180 Arginine decarboxylase signature 486 511 1.0E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01180 Arginine decarboxylase signature 172 193 1.0E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01180 Arginine decarboxylase signature 323 340 1.0E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01180 Arginine decarboxylase signature 461 482 1.0E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01180 Arginine decarboxylase signature 66 81 1.0E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01180 Arginine decarboxylase signature 196 218 1.0E-64 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 SUPERFAMILY SSF50621 435 563 5.49E-9 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 Gene3D G3DSA:3.20.20.10 67 348 2.9E-225 T 13-10-2018 IPR029066 PLP-binding barrel ambt_20575 34bb55b0397eadc740196f2f4f721381 636 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 277 290 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ambt_20575 34bb55b0397eadc740196f2f4f721381 636 Gene3D G3DSA:1.20.58.930 366 457 2.9E-225 T 13-10-2018 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 635 1.2E-220 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 93 343 2.8E-44 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 Gene3D G3DSA:2.40.37.10 13 561 2.9E-225 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 122 134 4.5E-18 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 333 352 4.5E-18 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 539 552 4.5E-18 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 4.5E-18 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 239 252 4.5E-18 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 98 116 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ambt_20575 34bb55b0397eadc740196f2f4f721381 636 PIRSF PIRSF001336 1 636 1.8E-250 T 13-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ambt_20575 34bb55b0397eadc740196f2f4f721381 636 SUPERFAMILY SSF51419 67 346 3.18E-64 T 13-10-2018 IPR029066 PLP-binding barrel ambt_11915 aa1900d0a7d0bb5c0ca68e6b973a8351 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ambt_11915 aa1900d0a7d0bb5c0ca68e6b973a8351 205 SUPERFAMILY SSF46689 2 70 1.7E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_11915 aa1900d0a7d0bb5c0ca68e6b973a8351 205 Gene3D G3DSA:1.10.357.10 63 203 1.1E-21 T 13-10-2018 ambt_11915 aa1900d0a7d0bb5c0ca68e6b973a8351 205 Gene3D G3DSA:1.10.10.60 3 60 2.0E-18 T 13-10-2018 ambt_11915 aa1900d0a7d0bb5c0ca68e6b973a8351 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.8E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_11915 aa1900d0a7d0bb5c0ca68e6b973a8351 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.8E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_11915 aa1900d0a7d0bb5c0ca68e6b973a8351 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 2.1E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_11915 aa1900d0a7d0bb5c0ca68e6b973a8351 205 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 152 201 8.9E-7 T 13-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type ambt_02045 ef48eb2cba4676cd432cbde5fd501122 370 Gene3D G3DSA:3.40.50.300 100 354 1.2E-87 T 13-10-2018 ambt_02045 ef48eb2cba4676cd432cbde5fd501122 370 SUPERFAMILY SSF52540 2 335 3.22E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02045 ef48eb2cba4676cd432cbde5fd501122 370 SMART SM00382 121 246 0.0033 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_02045 ef48eb2cba4676cd432cbde5fd501122 370 Pfam PF00437 Type II/IV secretion system protein 36 268 1.2E-37 T 13-10-2018 IPR001482 Type II/IV secretion system protein ambt_02045 ef48eb2cba4676cd432cbde5fd501122 370 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 343 6.8E-129 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 ambt_02045 ef48eb2cba4676cd432cbde5fd501122 370 Gene3D G3DSA:3.30.450.90 1 98 4.5E-26 T 13-10-2018 ambt_11205 1e075445b8063536f8cbc697832564d7 193 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 190 3.2E-63 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ambt_11205 1e075445b8063536f8cbc697832564d7 193 Gene3D G3DSA:3.40.50.1470 1 193 2.3E-67 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 ambt_11205 1e075445b8063536f8cbc697832564d7 193 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 ambt_11205 1e075445b8063536f8cbc697832564d7 193 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 32.512 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ambt_11205 1e075445b8063536f8cbc697832564d7 193 SUPERFAMILY SSF53178 4 192 1.44E-64 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 ambt_11205 1e075445b8063536f8cbc697832564d7 193 Pfam PF01195 Peptidyl-tRNA hydrolase 6 188 8.1E-50 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ambt_06470 cd9711450096b4ae4e9b79a39c450fc2 167 SUPERFAMILY SSF53218 5 162 2.09E-43 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily ambt_06470 cd9711450096b4ae4e9b79a39c450fc2 167 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 6 165 5.7E-81 T 13-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 ambt_06470 cd9711450096b4ae4e9b79a39c450fc2 167 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 9 148 1.9E-33 T 13-10-2018 IPR001453 MoaB/Mog domain ambt_06470 cd9711450096b4ae4e9b79a39c450fc2 167 Pfam PF00994 Probable molybdopterin binding domain 11 152 1.3E-32 T 13-10-2018 IPR001453 MoaB/Mog domain ambt_06470 cd9711450096b4ae4e9b79a39c450fc2 167 SMART SM00852 11 155 3.0E-25 T 13-10-2018 IPR001453 MoaB/Mog domain ambt_06470 cd9711450096b4ae4e9b79a39c450fc2 167 PIRSF PIRSF006443 2 163 1.6E-62 T 13-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 ambt_06470 cd9711450096b4ae4e9b79a39c450fc2 167 Gene3D G3DSA:3.40.980.10 2 167 1.6E-47 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily ambt_13210 61e3639712da917b3461154d839236c6 288 PIRSF PIRSF003092 2 279 2.4E-81 T 13-10-2018 IPR025501 ATP binding protein MinD ambt_13210 61e3639712da917b3461154d839236c6 288 Gene3D G3DSA:3.40.50.300 18 258 2.6E-60 T 13-10-2018 ambt_13210 61e3639712da917b3461154d839236c6 288 SUPERFAMILY SSF52540 19 279 1.6E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13210 61e3639712da917b3461154d839236c6 288 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 19 257 1.4E-21 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ambt_15635 ebb931f8b5431e7c350c6ff4192b094b 140 SUPERFAMILY SSF51316 3 87 3.24E-7 T 13-10-2018 IPR011057 Mss4-like superfamily ambt_15635 ebb931f8b5431e7c350c6ff4192b094b 140 Gene3D G3DSA:2.170.150.70 5 119 3.6E-9 T 13-10-2018 ambt_00590 a6d91ec2d708b797c355663155b5df18 860 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 594 835 4.0E-35 T 13-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 ambt_11655 3c42d86c0315a1dc0121a1c2642e2f24 343 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 335 37.596 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ambt_11655 3c42d86c0315a1dc0121a1c2642e2f24 343 Gene3D G3DSA:1.20.970.10 7 70 1.7E-18 T 13-10-2018 ambt_11655 3c42d86c0315a1dc0121a1c2642e2f24 343 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 8 334 3.3E-120 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ambt_11655 3c42d86c0315a1dc0121a1c2642e2f24 343 Gene3D G3DSA:3.40.1030.10 74 342 1.9E-98 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ambt_11655 3c42d86c0315a1dc0121a1c2642e2f24 343 SUPERFAMILY SSF52418 73 333 7.59E-88 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ambt_11655 3c42d86c0315a1dc0121a1c2642e2f24 343 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 66 1.1E-15 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 ambt_11655 3c42d86c0315a1dc0121a1c2642e2f24 343 SUPERFAMILY SSF47648 3 71 2.62E-17 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ambt_11655 3c42d86c0315a1dc0121a1c2642e2f24 343 Pfam PF00591 Glycosyl transferase family, a/b domain 76 322 1.2E-94 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ambt_15005 ea435d6132b388e82af7bd44f9f396dd 148 Gene3D G3DSA:1.10.1510.10 1 90 3.1E-26 T 13-10-2018 ambt_15005 ea435d6132b388e82af7bd44f9f396dd 148 Pfam PF09424 Yqey-like protein 5 146 1.1E-51 T 13-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 ambt_15005 ea435d6132b388e82af7bd44f9f396dd 148 SUPERFAMILY SSF89095 1 147 1.41E-39 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 ambt_15005 ea435d6132b388e82af7bd44f9f396dd 148 Gene3D G3DSA:1.10.10.410 91 147 1.1E-17 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ambt_19485 30991ab8b829ad805cbedfded2380e0a 149 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 109 138 2.0E-9 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 ambt_19485 30991ab8b829ad805cbedfded2380e0a 149 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 30 138 2.0E-50 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 ambt_19485 30991ab8b829ad805cbedfded2380e0a 149 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 26 148 28.555 T 13-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 ambt_19485 30991ab8b829ad805cbedfded2380e0a 149 Gene3D G3DSA:1.20.120.910 18 148 5.5E-35 T 13-10-2018 ambt_19485 30991ab8b829ad805cbedfded2380e0a 149 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 112 136 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site ambt_19485 30991ab8b829ad805cbedfded2380e0a 149 SUPERFAMILY SSF109635 8 108 2.88E-35 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily ambt_19485 30991ab8b829ad805cbedfded2380e0a 149 SUPERFAMILY SSF57716 109 147 2.42E-9 T 13-10-2018 ambt_19425 3f9f9715fb62e259c8c48aac595c4a28 408 SUPERFAMILY SSF141868 4 191 9.42E-31 T 13-10-2018 IPR035919 EAL domain superfamily ambt_19425 3f9f9715fb62e259c8c48aac595c4a28 408 Gene3D G3DSA:3.20.20.450 3 193 1.3E-19 T 13-10-2018 IPR035919 EAL domain superfamily ambt_19425 3f9f9715fb62e259c8c48aac595c4a28 408 Gene3D G3DSA:1.10.3210.10 194 344 4.8E-22 T 13-10-2018 ambt_19425 3f9f9715fb62e259c8c48aac595c4a28 408 Pfam PF00563 EAL domain 77 190 6.8E-15 T 13-10-2018 IPR001633 EAL domain ambt_19425 3f9f9715fb62e259c8c48aac595c4a28 408 Pfam PF08668 HDOD domain 204 322 2.3E-13 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD ambt_19425 3f9f9715fb62e259c8c48aac595c4a28 408 SMART SM00052 5 195 0.0014 T 13-10-2018 IPR001633 EAL domain ambt_19425 3f9f9715fb62e259c8c48aac595c4a28 408 SUPERFAMILY SSF109604 181 399 1.07E-41 T 13-10-2018 ambt_19425 3f9f9715fb62e259c8c48aac595c4a28 408 PIRSF PIRSF003180 1 403 6.7E-132 T 13-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing ambt_08335 56cd1b7390463812c20816e72126375c 584 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 361 516 1.4E-48 T 13-10-2018 IPR001162 UvrC family homology region ambt_08335 56cd1b7390463812c20816e72126375c 584 Gene3D G3DSA:3.30.420.340 355 516 1.8E-48 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily ambt_08335 56cd1b7390463812c20816e72126375c 584 SUPERFAMILY SSF82771 1 78 2.88E-19 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ambt_08335 56cd1b7390463812c20816e72126375c 584 SMART SM00278 562 581 6.9 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ambt_08335 56cd1b7390463812c20816e72126375c 584 SMART SM00278 530 549 12.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ambt_08335 56cd1b7390463812c20816e72126375c 584 Pfam PF14520 Helix-hairpin-helix domain 531 582 2.2E-7 T 13-10-2018 ambt_08335 56cd1b7390463812c20816e72126375c 584 SUPERFAMILY SSF46600 168 221 4.18E-14 T 13-10-2018 IPR036876 UVR domain superfamily ambt_08335 56cd1b7390463812c20816e72126375c 584 SMART SM00465 1 76 2.3E-13 T 13-10-2018 IPR000305 GIY-YIG endonuclease ambt_08335 56cd1b7390463812c20816e72126375c 584 SUPERFAMILY SSF47781 495 583 6.35E-21 T 13-10-2018 IPR010994 RuvA domain 2-like ambt_08335 56cd1b7390463812c20816e72126375c 584 Pfam PF01541 GIY-YIG catalytic domain 2 71 2.8E-7 T 13-10-2018 IPR000305 GIY-YIG endonuclease ambt_08335 56cd1b7390463812c20816e72126375c 584 Gene3D G3DSA:3.40.1440.10 1 80 1.1E-25 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ambt_08335 56cd1b7390463812c20816e72126375c 584 Pfam PF02151 UvrB/uvrC motif 183 216 1.7E-11 T 13-10-2018 IPR001943 UVR domain GO:0005515 ambt_08335 56cd1b7390463812c20816e72126375c 584 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 581 26.445 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 ambt_08335 56cd1b7390463812c20816e72126375c 584 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 1 563 4.1E-202 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 ambt_08335 56cd1b7390463812c20816e72126375c 584 Gene3D G3DSA:1.10.150.20 529 583 5.1E-23 T 13-10-2018 ambt_04970 7d4daf72e8590803286a656a74ca129b 329 SUPERFAMILY SSF52343 104 226 8.25E-22 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ambt_04970 7d4daf72e8590803286a656a74ca129b 329 SUPERFAMILY SSF63380 5 116 3.4E-16 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ambt_04970 7d4daf72e8590803286a656a74ca129b 329 SUPERFAMILY SSF54292 246 329 3.93E-15 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ambt_04970 7d4daf72e8590803286a656a74ca129b 329 Gene3D G3DSA:3.10.20.30 234 329 3.5E-12 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_04970 7d4daf72e8590803286a656a74ca129b 329 Pfam PF00175 Oxidoreductase NAD-binding domain 124 217 1.1E-8 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ambt_04970 7d4daf72e8590803286a656a74ca129b 329 PRINTS PR00409 Phthalate dioxygenase reductase family signature 101 115 6.3E-6 T 13-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ambt_04970 7d4daf72e8590803286a656a74ca129b 329 PRINTS PR00409 Phthalate dioxygenase reductase family signature 123 142 6.3E-6 T 13-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ambt_04970 7d4daf72e8590803286a656a74ca129b 329 PRINTS PR00409 Phthalate dioxygenase reductase family signature 203 211 6.3E-6 T 13-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ambt_04970 7d4daf72e8590803286a656a74ca129b 329 Pfam PF00970 Oxidoreductase FAD-binding domain 18 113 8.7E-9 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ambt_04970 7d4daf72e8590803286a656a74ca129b 329 Gene3D G3DSA:2.40.30.10 10 112 1.0E-10 T 13-10-2018 ambt_04970 7d4daf72e8590803286a656a74ca129b 329 Gene3D G3DSA:3.40.50.80 113 232 1.2E-18 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ambt_17200 2f3dc51e079968b82cbe368e662aa010 578 Pfam PF00437 Type II/IV secretion system protein 192 451 4.9E-82 T 13-10-2018 IPR001482 Type II/IV secretion system protein ambt_17200 2f3dc51e079968b82cbe368e662aa010 578 Gene3D G3DSA:3.30.300.160 62 142 1.2E-6 T 13-10-2018 ambt_17200 2f3dc51e079968b82cbe368e662aa010 578 Gene3D G3DSA:3.30.450.90 144 284 5.6E-44 T 13-10-2018 ambt_17200 2f3dc51e079968b82cbe368e662aa010 578 Gene3D G3DSA:3.40.50.300 286 565 5.0E-106 T 13-10-2018 ambt_17200 2f3dc51e079968b82cbe368e662aa010 578 SUPERFAMILY SSF52540 176 557 6.96E-98 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_17200 2f3dc51e079968b82cbe368e662aa010 578 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 379 393 - T 13-10-2018 IPR001482 Type II/IV secretion system protein ambt_17200 2f3dc51e079968b82cbe368e662aa010 578 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 41 145 1.8E-22 T 13-10-2018 IPR007831 General secretory system II, protein E, N-terminal ambt_17200 2f3dc51e079968b82cbe368e662aa010 578 SUPERFAMILY SSF160246 4 143 3.53E-37 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily ambt_14255 2707027c766097b237b098328ec185b5 458 Pfam PF00149 Calcineurin-like phosphoesterase 1 99 3.6E-13 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ambt_14255 2707027c766097b237b098328ec185b5 458 Gene3D G3DSA:3.60.21.10 1 281 4.9E-86 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like ambt_14255 2707027c766097b237b098328ec185b5 458 Gene3D G3DSA:3.30.160.720 283 349 1.3E-21 T 13-10-2018 ambt_14255 2707027c766097b237b098328ec185b5 458 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 281 382 9.0E-24 T 13-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain ambt_14255 2707027c766097b237b098328ec185b5 458 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 259 3.0E-67 T 13-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 ambt_14255 2707027c766097b237b098328ec185b5 458 SUPERFAMILY SSF56300 1 345 1.19E-56 T 13-10-2018 ambt_06825 985666a113fc61212459f99688ffe957 317 Pfam PF04784 Protein of unknown function, DUF547 121 234 6.2E-24 T 13-10-2018 IPR006869 Domain of unknown function DUF547 ambt_13720 b690f52b1e21f2887d9c967f6f8ad8ae 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 1.7E-13 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_13720 b690f52b1e21f2887d9c967f6f8ad8ae 274 Gene3D G3DSA:2.160.10.10 87 257 3.9E-55 T 13-10-2018 ambt_13720 b690f52b1e21f2887d9c967f6f8ad8ae 274 Gene3D G3DSA:1.10.166.10 1 70 7.5E-28 T 13-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 ambt_13720 b690f52b1e21f2887d9c967f6f8ad8ae 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 166 0.0017 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_13720 b690f52b1e21f2887d9c967f6f8ad8ae 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 273 1.9E-145 T 13-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 ambt_13720 b690f52b1e21f2887d9c967f6f8ad8ae 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ambt_13720 b690f52b1e21f2887d9c967f6f8ad8ae 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 3.3E-24 T 13-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 ambt_13720 b690f52b1e21f2887d9c967f6f8ad8ae 274 SUPERFAMILY SSF51161 2 256 3.05E-75 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_13720 b690f52b1e21f2887d9c967f6f8ad8ae 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 55.874 T 13-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 ambt_10530 0a17a7139c300c4eaa1f58a71199670b 468 Gene3D G3DSA:3.90.550.10 1 342 2.8E-122 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_10530 0a17a7139c300c4eaa1f58a71199670b 468 SUPERFAMILY SSF53448 1 277 7.66E-73 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_10530 0a17a7139c300c4eaa1f58a71199670b 468 Pfam PF00483 Nucleotidyl transferase 2 282 4.7E-74 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ambt_10530 0a17a7139c300c4eaa1f58a71199670b 468 SUPERFAMILY SSF51182 181 466 4.01E-89 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_10530 0a17a7139c300c4eaa1f58a71199670b 468 Gene3D G3DSA:2.60.120.10 343 453 1.8E-20 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_10530 0a17a7139c300c4eaa1f58a71199670b 468 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 465 9.6E-227 T 13-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 ambt_10530 0a17a7139c300c4eaa1f58a71199670b 468 Pfam PF01050 Mannose-6-phosphate isomerase 311 461 4.8E-74 T 13-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 ambt_11885 7c1d29c59ad4d8c36f97bd062be8da8f 331 Pfam PF04403 Paraquat-inducible protein A 1 145 1.4E-29 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like ambt_11885 7c1d29c59ad4d8c36f97bd062be8da8f 331 Pfam PF04403 Paraquat-inducible protein A 171 327 4.4E-57 T 13-10-2018 IPR007498 Intermembrane transport protein PqiA-like ambt_03965 fa5115a386b9e222c2f4c10c552a287a 355 Pfam PF13464 Domain of unknown function (DUF4115) 281 353 2.0E-20 T 13-10-2018 IPR025194 Domain of unknown function DUF4115 ambt_03965 fa5115a386b9e222c2f4c10c552a287a 355 SUPERFAMILY SSF47413 22 87 1.55E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_03965 fa5115a386b9e222c2f4c10c552a287a 355 Pfam PF13413 Helix-turn-helix domain 25 86 1.0E-17 T 13-10-2018 ambt_03965 fa5115a386b9e222c2f4c10c552a287a 355 Gene3D G3DSA:1.10.260.40 13 118 2.6E-23 T 13-10-2018 ambt_03965 fa5115a386b9e222c2f4c10c552a287a 355 SMART SM00530 25 86 4.8E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_20125 4eda455597887417803c6e5714a34dbe 316 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 290 7.5E-58 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ambt_20125 4eda455597887417803c6e5714a34dbe 316 Gene3D G3DSA:1.20.1510.10 20 210 4.0E-37 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ambt_20125 4eda455597887417803c6e5714a34dbe 316 SUPERFAMILY SSF160240 214 290 3.27E-7 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ambt_20125 4eda455597887417803c6e5714a34dbe 316 Pfam PF01545 Cation efflux family 25 207 9.8E-39 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ambt_20125 4eda455597887417803c6e5714a34dbe 316 SUPERFAMILY SSF161111 19 212 8.37E-47 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ambt_09260 b8f1db5dc75afd926b6a2a1ce5c55afc 199 SMART SM00471 27 152 0.0084 T 13-10-2018 IPR003607 HD/PDEase domain ambt_09260 b8f1db5dc75afd926b6a2a1ce5c55afc 199 Gene3D G3DSA:1.10.3210.10 1 199 1.0E-69 T 13-10-2018 ambt_09260 b8f1db5dc75afd926b6a2a1ce5c55afc 199 Pfam PF13023 HD domain 19 179 7.7E-9 T 13-10-2018 IPR006674 HD domain ambt_09260 b8f1db5dc75afd926b6a2a1ce5c55afc 199 SUPERFAMILY SSF109604 6 184 1.26E-29 T 13-10-2018 ambt_09260 b8f1db5dc75afd926b6a2a1ce5c55afc 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 84 187 6.0E-41 T 13-10-2018 ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 SUPERFAMILY SSF54534 282 383 3.53E-29 T 13-10-2018 ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 Gene3D G3DSA:3.10.50.40 172 274 4.1E-69 T 13-10-2018 ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 320 341 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 Hamap MF_01183 Chaperone SurA [surA]. 4 426 33.783 T 13-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 Gene3D G3DSA:3.10.50.40 281 380 3.7E-32 T 13-10-2018 ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 Gene3D G3DSA:1.10.4030.30 26 278 4.1E-69 T 13-10-2018 ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 SUPERFAMILY SSF109998 25 202 7.85E-39 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 Pfam PF00639 PPIC-type PPIASE domain 178 271 4.0E-19 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 Pfam PF00639 PPIC-type PPIASE domain 288 381 8.2E-22 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 Gene3D G3DSA:1.10.4030.30 381 426 1.4E-6 T 13-10-2018 ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 SUPERFAMILY SSF54534 172 275 1.77E-26 T 13-10-2018 ambt_14790 1180d971ef2b0d1c3bf470606ffffbc6 426 Pfam PF09312 SurA N-terminal domain 25 142 2.9E-37 T 13-10-2018 IPR015391 SurA N-terminal ambt_05175 404e0a18ad5ba6e94ad7151aebfe16e1 637 Pfam PF00245 Alkaline phosphatase 158 625 1.4E-120 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_05175 404e0a18ad5ba6e94ad7151aebfe16e1 637 SUPERFAMILY SSF53649 148 627 6.15E-148 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ambt_05175 404e0a18ad5ba6e94ad7151aebfe16e1 637 SMART SM00098 159 629 2.0E-141 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_05175 404e0a18ad5ba6e94ad7151aebfe16e1 637 PRINTS PR00113 Alkaline phosphatase signature 426 455 2.6E-43 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_05175 404e0a18ad5ba6e94ad7151aebfe16e1 637 PRINTS PR00113 Alkaline phosphatase signature 158 178 2.6E-43 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_05175 404e0a18ad5ba6e94ad7151aebfe16e1 637 PRINTS PR00113 Alkaline phosphatase signature 261 281 2.6E-43 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_05175 404e0a18ad5ba6e94ad7151aebfe16e1 637 PRINTS PR00113 Alkaline phosphatase signature 214 229 2.6E-43 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_05175 404e0a18ad5ba6e94ad7151aebfe16e1 637 Gene3D G3DSA:3.40.720.10 132 636 1.7E-176 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ambt_14965 c33468b40092f3fb6f823453c6c9b401 122 PRINTS PR00332 Histidine triad family signature 26 44 3.2E-21 T 13-10-2018 IPR001310 Histidine triad (HIT) protein ambt_14965 c33468b40092f3fb6f823453c6c9b401 122 PRINTS PR00332 Histidine triad family signature 5 21 3.2E-21 T 13-10-2018 IPR001310 Histidine triad (HIT) protein ambt_14965 c33468b40092f3fb6f823453c6c9b401 122 PRINTS PR00332 Histidine triad family signature 94 104 3.2E-21 T 13-10-2018 IPR001310 Histidine triad (HIT) protein ambt_14965 c33468b40092f3fb6f823453c6c9b401 122 Pfam PF01230 HIT domain 12 107 8.8E-27 T 13-10-2018 IPR001310 Histidine triad (HIT) protein ambt_14965 c33468b40092f3fb6f823453c6c9b401 122 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 13-10-2018 IPR019808 Histidine triad, conserved site ambt_14965 c33468b40092f3fb6f823453c6c9b401 122 Gene3D G3DSA:3.30.428.10 2 114 3.9E-37 T 13-10-2018 IPR036265 HIT-like superfamily ambt_14965 c33468b40092f3fb6f823453c6c9b401 122 SUPERFAMILY SSF54197 3 113 5.72E-37 T 13-10-2018 IPR036265 HIT-like superfamily ambt_02790 3a7e5b23dc6e79a1621a4f638211875f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.9E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_02790 3a7e5b23dc6e79a1621a4f638211875f 306 Gene3D G3DSA:3.40.190.10 103 294 2.0E-38 T 13-10-2018 ambt_02790 3a7e5b23dc6e79a1621a4f638211875f 306 Gene3D G3DSA:1.10.10.10 7 93 6.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_02790 3a7e5b23dc6e79a1621a4f638211875f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 7.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_02790 3a7e5b23dc6e79a1621a4f638211875f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 7.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_02790 3a7e5b23dc6e79a1621a4f638211875f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 7.1E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_02790 3a7e5b23dc6e79a1621a4f638211875f 306 Pfam PF03466 LysR substrate binding domain 91 298 1.1E-29 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_02790 3a7e5b23dc6e79a1621a4f638211875f 306 SUPERFAMILY SSF46785 7 85 1.4E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_02790 3a7e5b23dc6e79a1621a4f638211875f 306 SUPERFAMILY SSF53850 91 301 6.02E-31 T 13-10-2018 ambt_02790 3a7e5b23dc6e79a1621a4f638211875f 306 Gene3D G3DSA:3.40.190.10 167 267 2.0E-38 T 13-10-2018 ambt_03350 1a36e0fd634429e5b1e09902c7bebcba 712 Pfam PF00593 TonB dependent receptor 280 705 5.9E-50 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_03350 1a36e0fd634429e5b1e09902c7bebcba 712 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 79 688 5.4E-83 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ambt_03350 1a36e0fd634429e5b1e09902c7bebcba 712 Gene3D G3DSA:2.40.170.20 185 711 3.0E-90 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_03350 1a36e0fd634429e5b1e09902c7bebcba 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 174 2.6E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_03350 1a36e0fd634429e5b1e09902c7bebcba 712 SUPERFAMILY SSF56935 46 708 4.16E-114 T 13-10-2018 ambt_03350 1a36e0fd634429e5b1e09902c7bebcba 712 Gene3D G3DSA:2.170.130.10 60 184 1.7E-29 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 Gene3D G3DSA:3.30.540.10 1 140 9.3E-52 T 13-10-2018 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 SUPERFAMILY SSF56655 1 257 1.01E-84 T 13-10-2018 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 5.2E-25 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 5.2E-25 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 5.2E-25 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 5.2E-25 T 13-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.3E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.3E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 1.3E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 1.3E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 1.3E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 1.3E-60 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 Gene3D G3DSA:3.40.190.80 141 258 3.2E-36 T 13-10-2018 ambt_03845 ddf72c1e934f9b95c8036b2bd7f27818 258 Pfam PF00459 Inositol monophosphatase family 2 252 1.6E-72 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_07910 1aae3e3ae4f6c545716ccc612ba0fc42 243 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 20 35 - T 13-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 ambt_07910 1aae3e3ae4f6c545716ccc612ba0fc42 243 Gene3D G3DSA:3.40.1080.10 2 228 6.6E-96 T 13-10-2018 ambt_07910 1aae3e3ae4f6c545716ccc612ba0fc42 243 Pfam PF01144 Coenzyme A transferase 9 218 7.5E-72 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ambt_07910 1aae3e3ae4f6c545716ccc612ba0fc42 243 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 5 218 3.2E-74 T 13-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 ambt_07910 1aae3e3ae4f6c545716ccc612ba0fc42 243 SMART SM00882 8 219 5.9E-86 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ambt_07910 1aae3e3ae4f6c545716ccc612ba0fc42 243 SUPERFAMILY SSF100950 5 227 4.25E-86 T 13-10-2018 IPR037171 NagB/RpiA transferase-like ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 Gene3D G3DSA:2.40.50.140 69 148 6.0E-17 T 13-10-2018 ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 SMART SM00316 639 722 1.7E-16 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 Pfam PF08461 Ribonuclease R winged-helix domain 24 76 3.9E-5 T 13-10-2018 IPR013668 Ribonuclease R winged-helix domain ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 TIGRFAM TIGR02063 RNase_R: ribonuclease R 20 721 2.6E-270 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 719 4.3E-254 T 13-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 Pfam PF00575 S1 RNA binding domain 639 719 7.8E-17 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 SUPERFAMILY SSF50249 220 639 4.57E-144 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 Hamap MF_01895 Ribonuclease R [rnr]. 38 722 55.611 T 13-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 Pfam PF08206 Ribonuclease B OB domain 87 141 1.4E-18 T 13-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 SUPERFAMILY SSF50249 67 147 8.91E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 Gene3D G3DSA:2.40.50.140 642 756 8.7E-22 T 13-10-2018 ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 SMART SM00955 260 588 3.1E-179 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 SMART SM00357 86 145 1.9E-10 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 SUPERFAMILY SSF50249 641 720 5.48E-23 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 SUPERFAMILY SSF50249 138 237 7.89E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 Pfam PF00773 RNB domain 260 587 7.1E-109 T 13-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 ambt_19145 6e09d91016236b21c0a1b3bb03444b6c 770 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 13-10-2018 IPR022966 Ribonuclease II/R, conserved site ambt_02955 65b1c4529081bb2d890220fcecba0d36 578 Gene3D G3DSA:2.60.40.1730 53 239 6.4E-17 T 13-10-2018 ambt_02955 65b1c4529081bb2d890220fcecba0d36 578 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 350 362 3.4E-5 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_02955 65b1c4529081bb2d890220fcecba0d36 578 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 331 346 3.4E-5 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_02955 65b1c4529081bb2d890220fcecba0d36 578 SUPERFAMILY SSF63737 50 240 1.05E-23 T 13-10-2018 ambt_02955 65b1c4529081bb2d890220fcecba0d36 578 SUPERFAMILY SSF55486 255 493 6.59E-43 T 13-10-2018 ambt_02955 65b1c4529081bb2d890220fcecba0d36 578 Pfam PF01433 Peptidase family M1 domain 257 482 1.0E-20 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_02955 65b1c4529081bb2d890220fcecba0d36 578 Gene3D G3DSA:1.10.390.60 249 486 1.5E-39 T 13-10-2018 ambt_13215 2aef145265f7233ca9cff33ec8f6192d 463 SUPERFAMILY SSF52540 248 438 6.89E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13215 2aef145265f7233ca9cff33ec8f6192d 463 Gene3D G3DSA:3.40.50.300 244 429 5.4E-59 T 13-10-2018 ambt_13215 2aef145265f7233ca9cff33ec8f6192d 463 SMART SM00382 247 388 6.5E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13215 2aef145265f7233ca9cff33ec8f6192d 463 SMART SM00962 248 441 8.5E-55 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_13215 2aef145265f7233ca9cff33ec8f6192d 463 Gene3D G3DSA:1.20.120.1380 220 432 5.4E-59 T 13-10-2018 ambt_13215 2aef145265f7233ca9cff33ec8f6192d 463 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 336 7.6E-81 T 13-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 ambt_13215 2aef145265f7233ca9cff33ec8f6192d 463 Pfam PF00448 SRP54-type protein, GTPase domain 251 438 3.2E-43 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_03430 25e032de5bed5aebc47d6e1d9da9a74c 178 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 11 174 9.8E-46 T 13-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE ambt_03380 59ee6aaf9e21387538cb6755b39b684a 132 Pfam PF12833 Helix-turn-helix domain 44 117 1.6E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_03380 59ee6aaf9e21387538cb6755b39b684a 132 SMART SM00342 38 120 6.7E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_03380 59ee6aaf9e21387538cb6755b39b684a 132 SUPERFAMILY SSF46689 74 122 9.56E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_03380 59ee6aaf9e21387538cb6755b39b684a 132 Gene3D G3DSA:1.10.10.60 26 126 7.7E-20 T 13-10-2018 ambt_10335 11f8b7ff28ad1f382df4e0cb5d461c43 424 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 13 415 48.385 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ambt_10335 11f8b7ff28ad1f382df4e0cb5d461c43 424 SUPERFAMILY SSF53448 14 285 2.93E-73 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_10335 11f8b7ff28ad1f382df4e0cb5d461c43 424 Pfam PF00483 Nucleotidyl transferase 18 280 7.5E-64 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ambt_10335 11f8b7ff28ad1f382df4e0cb5d461c43 424 Gene3D G3DSA:3.90.550.10 4 291 3.2E-83 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_10335 11f8b7ff28ad1f382df4e0cb5d461c43 424 SUPERFAMILY SSF51161 302 411 2.04E-14 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_10335 11f8b7ff28ad1f382df4e0cb5d461c43 424 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 17 388 2.0E-148 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ambt_10335 11f8b7ff28ad1f382df4e0cb5d461c43 424 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 108 116 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ambt_10335 11f8b7ff28ad1f382df4e0cb5d461c43 424 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 207 217 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ambt_10335 11f8b7ff28ad1f382df4e0cb5d461c43 424 Gene3D G3DSA:2.160.10.10 292 418 4.8E-34 T 13-10-2018 ambt_10335 11f8b7ff28ad1f382df4e0cb5d461c43 424 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 22 41 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ambt_09955 34c52c6211d34fbcd9d3704f2c0b2528 298 Pfam PF13177 DNA polymerase III, delta subunit 15 162 1.8E-43 T 13-10-2018 ambt_09955 34c52c6211d34fbcd9d3704f2c0b2528 298 Gene3D G3DSA:3.40.50.300 5 165 1.1E-47 T 13-10-2018 ambt_09955 34c52c6211d34fbcd9d3704f2c0b2528 298 SUPERFAMILY SSF52540 7 199 2.94E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20170 9daba0756b1dc092dfc17fb24655d3b3 546 Gene3D G3DSA:3.40.50.300 330 546 3.7E-43 T 13-10-2018 ambt_20170 9daba0756b1dc092dfc17fb24655d3b3 546 Gene3D G3DSA:1.20.1560.10 18 329 3.0E-16 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_20170 9daba0756b1dc092dfc17fb24655d3b3 546 SMART SM00382 374 542 1.7E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_20170 9daba0756b1dc092dfc17fb24655d3b3 546 Pfam PF00664 ABC transporter transmembrane region 29 281 8.2E-14 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ambt_20170 9daba0756b1dc092dfc17fb24655d3b3 546 Pfam PF00005 ABC transporter 368 496 2.8E-17 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_20170 9daba0756b1dc092dfc17fb24655d3b3 546 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_20170 9daba0756b1dc092dfc17fb24655d3b3 546 SUPERFAMILY SSF52540 363 544 9.45E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20170 9daba0756b1dc092dfc17fb24655d3b3 546 SUPERFAMILY SSF90123 24 327 7.32E-25 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 Gene3D G3DSA:3.30.450.20 342 484 6.6E-15 T 13-10-2018 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SMART SM00387 614 724 6.9E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SUPERFAMILY SSF55874 561 727 1.57E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 Gene3D G3DSA:3.30.565.10 573 733 5.9E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SUPERFAMILY SSF47384 491 570 4.9E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 Pfam PF13188 PAS domain 246 275 0.1 T 13-10-2018 IPR000014 PAS domain ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 352 475 1.4E-6 T 13-10-2018 IPR000014 PAS domain ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 Gene3D G3DSA:3.40.50.2300 746 867 1.4E-16 T 13-10-2018 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SUPERFAMILY SSF55785 340 466 2.44E-11 T 13-10-2018 IPR035965 PAS domain superfamily ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SMART SM00448 749 862 6.4E-6 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 Pfam PF00512 His Kinase A (phospho-acceptor) domain 506 570 6.2E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 Pfam PF00072 Response regulator receiver domain 754 862 5.0E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 678 2.4E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 664 2.4E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 702 2.4E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 721 2.4E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 Gene3D G3DSA:1.10.287.130 492 572 3.9E-10 T 13-10-2018 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SUPERFAMILY SSF55785 232 286 2.97E-5 T 13-10-2018 IPR035965 PAS domain superfamily ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SMART SM00388 506 570 1.2E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 Pfam PF08448 PAS fold 362 469 3.1E-15 T 13-10-2018 IPR013656 PAS fold-4 ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SUPERFAMILY SSF52172 750 866 2.56E-16 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SMART SM00091 355 421 6.2 T 13-10-2018 IPR000014 PAS domain ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SMART SM00091 245 313 57.0 T 13-10-2018 IPR000014 PAS domain ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SMART SM00091 125 193 1.1 T 13-10-2018 IPR000014 PAS domain ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 617 723 3.0E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 SUPERFAMILY SSF55785 111 226 1.07E-5 T 13-10-2018 IPR035965 PAS domain superfamily ambt_01115 a4a60857d38d62ce35cd99c2463a7bf9 867 Gene3D G3DSA:3.30.450.20 112 234 3.6E-7 T 13-10-2018 ambt_12320 63ba56d54410bba439bd1f2d2d25cc18 430 Pfam PF00571 CBS domain 277 325 2.2E-6 T 13-10-2018 IPR000644 CBS domain ambt_12320 63ba56d54410bba439bd1f2d2d25cc18 430 Gene3D G3DSA:3.30.465.10 342 418 3.0E-27 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ambt_12320 63ba56d54410bba439bd1f2d2d25cc18 430 Pfam PF03471 Transporter associated domain 343 417 1.1E-17 T 13-10-2018 IPR005170 Transporter-associated domain ambt_12320 63ba56d54410bba439bd1f2d2d25cc18 430 Gene3D G3DSA:3.10.580.10 187 341 1.6E-44 T 13-10-2018 ambt_12320 63ba56d54410bba439bd1f2d2d25cc18 430 SUPERFAMILY SSF54631 193 329 2.02E-26 T 13-10-2018 ambt_12320 63ba56d54410bba439bd1f2d2d25cc18 430 SMART SM01091 342 420 5.3E-23 T 13-10-2018 IPR005170 Transporter-associated domain ambt_12320 63ba56d54410bba439bd1f2d2d25cc18 430 SUPERFAMILY SSF56176 341 419 8.72E-21 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ambt_12320 63ba56d54410bba439bd1f2d2d25cc18 430 Pfam PF01595 Domain of unknown function DUF21 15 182 1.5E-48 T 13-10-2018 IPR002550 CNNM, transmembrane domain ambt_16260 458c942154cab675077c22bc4923161c 723 SUPERFAMILY SSF55785 186 293 1.13E-6 T 13-10-2018 IPR035965 PAS domain superfamily ambt_16260 458c942154cab675077c22bc4923161c 723 SUPERFAMILY SSF55785 93 170 3.66E-8 T 13-10-2018 IPR035965 PAS domain superfamily ambt_16260 458c942154cab675077c22bc4923161c 723 SMART SM00052 462 707 1.3E-68 T 13-10-2018 IPR001633 EAL domain ambt_16260 458c942154cab675077c22bc4923161c 723 Gene3D G3DSA:3.30.70.270 293 458 2.8E-45 T 13-10-2018 ambt_16260 458c942154cab675077c22bc4923161c 723 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 291 451 9.3E-38 T 13-10-2018 IPR000160 GGDEF domain ambt_16260 458c942154cab675077c22bc4923161c 723 SUPERFAMILY SSF55073 300 454 1.65E-40 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_16260 458c942154cab675077c22bc4923161c 723 Gene3D G3DSA:3.20.20.450 463 714 3.3E-70 T 13-10-2018 IPR035919 EAL domain superfamily ambt_16260 458c942154cab675077c22bc4923161c 723 Pfam PF00563 EAL domain 468 702 4.1E-56 T 13-10-2018 IPR001633 EAL domain ambt_16260 458c942154cab675077c22bc4923161c 723 SMART SM00267 284 452 7.2E-46 T 13-10-2018 IPR000160 GGDEF domain ambt_16260 458c942154cab675077c22bc4923161c 723 Gene3D G3DSA:3.30.450.20 47 165 1.3E-11 T 13-10-2018 ambt_16260 458c942154cab675077c22bc4923161c 723 SMART SM00086 123 167 0.39 T 13-10-2018 IPR001610 PAC motif ambt_16260 458c942154cab675077c22bc4923161c 723 SMART SM00086 242 284 24.0 T 13-10-2018 IPR001610 PAC motif ambt_16260 458c942154cab675077c22bc4923161c 723 Gene3D G3DSA:3.30.450.20 174 292 3.3E-9 T 13-10-2018 ambt_16260 458c942154cab675077c22bc4923161c 723 SUPERFAMILY SSF141868 468 714 9.02E-68 T 13-10-2018 IPR035919 EAL domain superfamily ambt_16260 458c942154cab675077c22bc4923161c 723 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 447 6.5E-35 T 13-10-2018 IPR000160 GGDEF domain ambt_15770 5858966baaecf672f4e955a424d0a44d 348 SUPERFAMILY SSF50182 95 156 4.25E-11 T 13-10-2018 IPR010920 LSM domain superfamily ambt_15770 5858966baaecf672f4e955a424d0a44d 348 Gene3D G3DSA:2.30.30.60 110 157 8.5E-8 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ambt_15770 5858966baaecf672f4e955a424d0a44d 348 Pfam PF00924 Mechanosensitive ion channel 49 245 4.1E-21 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ambt_15770 5858966baaecf672f4e955a424d0a44d 348 SUPERFAMILY SSF82689 166 249 4.58E-8 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ambt_08065 573a559006ca0dc78ba71f2a4988f300 772 Gene3D G3DSA:1.20.1640.10 588 769 2.8E-12 T 13-10-2018 ambt_08065 573a559006ca0dc78ba71f2a4988f300 772 Gene3D G3DSA:1.20.1640.10 202 391 1.5E-5 T 13-10-2018 ambt_08065 573a559006ca0dc78ba71f2a4988f300 772 Pfam PF03176 MMPL family 158 411 1.7E-10 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ambt_08065 573a559006ca0dc78ba71f2a4988f300 772 Pfam PF03176 MMPL family 474 762 2.7E-16 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ambt_08065 573a559006ca0dc78ba71f2a4988f300 772 SUPERFAMILY SSF82866 565 765 3.79E-32 T 13-10-2018 ambt_08065 573a559006ca0dc78ba71f2a4988f300 772 SUPERFAMILY SSF82866 181 378 8.5E-27 T 13-10-2018 ambt_18600 f77583468a9ab6ccb76bb6c99daf1109 86 Pfam PF01381 Helix-turn-helix 13 65 1.3E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_18600 f77583468a9ab6ccb76bb6c99daf1109 86 SUPERFAMILY SSF47413 7 73 3.33E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_18600 f77583468a9ab6ccb76bb6c99daf1109 86 Gene3D G3DSA:1.10.260.40 1 86 3.0E-16 T 13-10-2018 ambt_18600 f77583468a9ab6ccb76bb6c99daf1109 86 SMART SM00530 12 67 1.3E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_11180 52bf617b18c332420ecc657a7b9338ba 315 Gene3D G3DSA:3.40.50.2020 148 290 2.1E-132 T 13-10-2018 ambt_11180 52bf617b18c332420ecc657a7b9338ba 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 13-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 ambt_11180 52bf617b18c332420ecc657a7b9338ba 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 9.8E-51 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ambt_11180 52bf617b18c332420ecc657a7b9338ba 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 4.1E-123 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ambt_11180 52bf617b18c332420ecc657a7b9338ba 315 Gene3D G3DSA:3.40.50.2020 7 302 2.1E-132 T 13-10-2018 ambt_11180 52bf617b18c332420ecc657a7b9338ba 315 SUPERFAMILY SSF53271 69 306 2.91E-65 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like ambt_11180 52bf617b18c332420ecc657a7b9338ba 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 203 313 1.1E-30 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ambt_11180 52bf617b18c332420ecc657a7b9338ba 315 SMART SM01400 4 121 2.2E-78 T 13-10-2018 ambt_11180 52bf617b18c332420ecc657a7b9338ba 315 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.001 T 13-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 ambt_16840 f189adcdf696e26b13f66b401003e069 418 Gene3D G3DSA:3.30.70.270 5 155 1.2E-30 T 13-10-2018 ambt_16840 f189adcdf696e26b13f66b401003e069 418 Pfam PF13438 Domain of unknown function (DUF4113) 367 416 2.3E-20 T 13-10-2018 IPR025188 Domain of unknown function DUF4113 ambt_16840 f189adcdf696e26b13f66b401003e069 418 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 348 1.6E-8 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ambt_16840 f189adcdf696e26b13f66b401003e069 418 SUPERFAMILY SSF56672 1 235 1.16E-54 T 13-10-2018 ambt_16840 f189adcdf696e26b13f66b401003e069 418 Gene3D G3DSA:1.10.150.20 178 230 1.5E-6 T 13-10-2018 ambt_16840 f189adcdf696e26b13f66b401003e069 418 Pfam PF00817 impB/mucB/samB family 5 150 9.0E-25 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ambt_16840 f189adcdf696e26b13f66b401003e069 418 Gene3D G3DSA:2.30.40.20 10 73 1.2E-30 T 13-10-2018 ambt_19505 a3d122b9b0023a189def341bf9d12e5a 264 Gene3D G3DSA:3.20.20.60 1 264 2.5E-107 T 13-10-2018 ambt_19505 a3d122b9b0023a189def341bf9d12e5a 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 6.2E-110 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ambt_19505 a3d122b9b0023a189def341bf9d12e5a 264 SUPERFAMILY SSF51621 3 263 3.77E-106 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ambt_19505 a3d122b9b0023a189def341bf9d12e5a 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 3.1E-108 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ambt_19505 a3d122b9b0023a189def341bf9d12e5a 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 42.296 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ambt_19505 a3d122b9b0023a189def341bf9d12e5a 264 PIRSF PIRSF000388 1 264 3.3E-102 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ambt_19545 a120132aedeb1011058f40135e174b37 740 SUPERFAMILY SSF55874 571 739 1.86E-21 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_19545 a120132aedeb1011058f40135e174b37 740 Gene3D G3DSA:1.10.287.130 520 577 3.4E-8 T 13-10-2018 ambt_19545 a120132aedeb1011058f40135e174b37 740 TIGRFAM TIGR03785 marine_sort_HK: proteobacterial dedicated sortase system histidine kinase 7 738 1.6E-273 T 13-10-2018 IPR022510 Sortase system, histidine kinase ambt_19545 a120132aedeb1011058f40135e174b37 740 SMART SM00387 624 740 7.5E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_19545 a120132aedeb1011058f40135e174b37 740 SMART SM00388 513 580 9.0E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_19545 a120132aedeb1011058f40135e174b37 740 Gene3D G3DSA:1.20.1480.50 419 519 5.2E-6 T 13-10-2018 ambt_19545 a120132aedeb1011058f40135e174b37 740 SMART SM00304 457 512 0.24 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_19545 a120132aedeb1011058f40135e174b37 740 SMART SM00304 523 580 25.0 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_19545 a120132aedeb1011058f40135e174b37 740 Pfam PF00512 His Kinase A (phospho-acceptor) domain 515 579 1.3E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_19545 a120132aedeb1011058f40135e174b37 740 Gene3D G3DSA:2.60.40.1190 83 285 3.1E-9 T 13-10-2018 ambt_19545 a120132aedeb1011058f40135e174b37 740 SUPERFAMILY SSF47384 497 578 2.55E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_19545 a120132aedeb1011058f40135e174b37 740 SUPERFAMILY SSF49344 78 264 3.73E-5 T 13-10-2018 ambt_19545 a120132aedeb1011058f40135e174b37 740 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 627 738 9.2E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_19545 a120132aedeb1011058f40135e174b37 740 Gene3D G3DSA:3.30.565.10 578 739 3.6E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_04600 312f1c0bd2d4d54598e7a334a37018a6 462 Pfam PF00593 TonB dependent receptor 61 460 1.5E-52 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_04600 312f1c0bd2d4d54598e7a334a37018a6 462 SUPERFAMILY SSF56935 30 462 1.86E-65 T 13-10-2018 ambt_04600 312f1c0bd2d4d54598e7a334a37018a6 462 Gene3D G3DSA:2.40.170.20 13 462 2.4E-65 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_12665 fcf108a382d3fbd8355c80379ec1ae4a 372 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ambt_12665 fcf108a382d3fbd8355c80379ec1ae4a 372 PIRSF PIRSF001456 3 365 1.8E-141 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ambt_12665 fcf108a382d3fbd8355c80379ec1ae4a 372 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 4.3E-141 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ambt_12665 fcf108a382d3fbd8355c80379ec1ae4a 372 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.176 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ambt_12665 fcf108a382d3fbd8355c80379ec1ae4a 372 Pfam PF01264 Chorismate synthase 10 345 2.1E-141 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ambt_12665 fcf108a382d3fbd8355c80379ec1ae4a 372 SUPERFAMILY SSF103263 4 352 1.7E-146 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ambt_12665 fcf108a382d3fbd8355c80379ec1ae4a 372 Gene3D G3DSA:3.60.150.10 1 363 7.2E-156 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ambt_12665 fcf108a382d3fbd8355c80379ec1ae4a 372 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ambt_12505 1665d9bfc4ae418bcf67c4070340986b 422 PIRSF PIRSF006603 1 421 7.0E-101 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_12505 1665d9bfc4ae418bcf67c4070340986b 422 Pfam PF01554 MatE 218 376 1.0E-21 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_12505 1665d9bfc4ae418bcf67c4070340986b 422 Pfam PF01554 MatE 2 153 7.7E-25 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_12505 1665d9bfc4ae418bcf67c4070340986b 422 TIGRFAM TIGR00797 matE: MATE efflux family protein 2 383 8.9E-54 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 428 1.4E-139 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 SMART SM01192 143 429 8.9E-219 T 13-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 PRINTS PR00148 Enolase signature 37 51 2.3E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 PRINTS PR00148 Enolase signature 165 178 2.3E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 PRINTS PR00148 Enolase signature 367 384 2.3E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 PRINTS PR00148 Enolase signature 315 326 2.3E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 PRINTS PR00148 Enolase signature 338 352 2.3E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 PRINTS PR00148 Enolase signature 107 123 2.3E-45 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 PIRSF PIRSF001400 1 429 6.6E-192 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 ProSitePatterns PS00164 Enolase signature. 338 351 - T 13-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 Pfam PF03952 Enolase, N-terminal domain 4 134 7.8E-58 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 Gene3D G3DSA:3.20.20.120 128 430 1.6E-136 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 SMART SM01193 4 134 1.6E-89 T 13-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 SUPERFAMILY SSF54826 3 139 2.05E-55 T 13-10-2018 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 3.9E-205 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 SUPERFAMILY SSF51604 143 426 3.25E-129 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 Hamap MF_00318 Enolase [eno]. 2 415 44.349 T 13-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ambt_13980 42ef0cd5739be2eb5c50f182d03dd270 430 Gene3D G3DSA:3.30.390.10 1 127 1.4E-55 T 13-10-2018 IPR029017 Enolase-like, N-terminal ambt_05860 64caed08ea9492c4da705593bef015df 695 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 20 106 1.1E-18 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ambt_05860 64caed08ea9492c4da705593bef015df 695 Gene3D G3DSA:2.60.40.10 6 135 9.0E-34 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_05860 64caed08ea9492c4da705593bef015df 695 SUPERFAMILY SSF51445 137 572 1.02E-106 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_05860 64caed08ea9492c4da705593bef015df 695 Gene3D G3DSA:2.60.40.1180 586 688 1.4E-15 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta ambt_05860 64caed08ea9492c4da705593bef015df 695 SUPERFAMILY SSF51011 587 688 2.66E-18 T 13-10-2018 ambt_05860 64caed08ea9492c4da705593bef015df 695 SUPERFAMILY SSF81296 16 142 4.0E-32 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_05860 64caed08ea9492c4da705593bef015df 695 Gene3D G3DSA:3.20.20.80 139 579 2.0E-154 T 13-10-2018 ambt_05860 64caed08ea9492c4da705593bef015df 695 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 16 671 4.4E-236 T 13-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 ambt_05860 64caed08ea9492c4da705593bef015df 695 Pfam PF00128 Alpha amylase, catalytic domain 190 283 3.7E-7 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_05860 64caed08ea9492c4da705593bef015df 695 SMART SM00642 166 560 1.6E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 Gene3D G3DSA:3.40.190.80 186 324 1.6E-53 T 13-10-2018 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 Gene3D G3DSA:3.30.540.10 2 185 8.4E-60 T 13-10-2018 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 SUPERFAMILY SSF56655 2 321 2.96E-109 T 13-10-2018 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 263 275 - T 13-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 323 44.592 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 169 192 1.6E-61 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 59 85 1.6E-61 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 195 222 1.6E-61 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 297 322 1.6E-61 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 22 49 1.6E-61 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 138 161 1.6E-61 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 184 1.9E-51 T 13-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 PIRSF PIRSF500210 2 325 1.2E-118 T 13-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ambt_17435 3fc041cac04c2511a7b6c856a279cc20 325 PIRSF PIRSF000904 2 325 4.7E-115 T 13-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ambt_15295 704c2f7c45ef3f35dd8de35bb88f3a8e 194 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 191 4.4E-48 T 13-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA ambt_15295 704c2f7c45ef3f35dd8de35bb88f3a8e 194 Gene3D G3DSA:3.40.50.1820 1 193 3.5E-54 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_15295 704c2f7c45ef3f35dd8de35bb88f3a8e 194 SUPERFAMILY SSF53474 4 192 2.15E-16 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_08470 fc002bb0274e1a2dd42890f461f80d72 897 Gene3D G3DSA:3.40.50.300 508 810 3.9E-121 T 13-10-2018 ambt_08470 fc002bb0274e1a2dd42890f461f80d72 897 Pfam PF01580 FtsK/SpoIIIE family 510 724 3.8E-71 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ambt_08470 fc002bb0274e1a2dd42890f461f80d72 897 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 9 179 2.7E-37 T 13-10-2018 IPR025199 DNA translocase FtsK, 4TM region ambt_08470 fc002bb0274e1a2dd42890f461f80d72 897 Gene3D G3DSA:1.10.10.10 833 895 7.2E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_08470 fc002bb0274e1a2dd42890f461f80d72 897 SUPERFAMILY SSF52540 485 795 4.45E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_08470 fc002bb0274e1a2dd42890f461f80d72 897 SMART SM00843 829 894 2.6E-39 T 13-10-2018 IPR018541 FtsK gamma domain ambt_08470 fc002bb0274e1a2dd42890f461f80d72 897 Pfam PF09397 Ftsk gamma domain 831 891 4.1E-26 T 13-10-2018 IPR018541 FtsK gamma domain ambt_08470 fc002bb0274e1a2dd42890f461f80d72 897 Gene3D G3DSA:3.30.980.40 403 507 1.2E-34 T 13-10-2018 ambt_08470 fc002bb0274e1a2dd42890f461f80d72 897 SUPERFAMILY SSF46785 829 894 1.18E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_04645 a9d3ae24f46b7716cae0fee401bfd7c2 269 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 42.353 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ambt_04645 a9d3ae24f46b7716cae0fee401bfd7c2 269 SUPERFAMILY SSF51366 1 256 1.41E-67 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ambt_04645 a9d3ae24f46b7716cae0fee401bfd7c2 269 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 3.1E-106 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ambt_04645 a9d3ae24f46b7716cae0fee401bfd7c2 269 Pfam PF00977 Histidine biosynthesis protein 5 239 8.6E-75 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 ambt_04645 a9d3ae24f46b7716cae0fee401bfd7c2 269 Gene3D G3DSA:3.20.20.70 1 264 2.0E-89 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 Gene3D G3DSA:2.40.30.10 237 325 1.1E-27 T 13-10-2018 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 SUPERFAMILY SSF50465 330 431 5.76E-33 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ambt_12435 ad1384a416c2959e7f524297360e87c6 471 Gene3D G3DSA:2.40.30.10 327 432 8.7E-35 T 13-10-2018 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 Pfam PF00009 Elongation factor Tu GTP binding domain 23 212 1.5E-44 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 25 430 1.7E-196 T 13-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 PRINTS PR00315 GTP-binding elongation factor signature 87 95 1.9E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 PRINTS PR00315 GTP-binding elongation factor signature 123 134 1.9E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 PRINTS PR00315 GTP-binding elongation factor signature 26 39 1.9E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 PRINTS PR00315 GTP-binding elongation factor signature 160 169 1.9E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 PRINTS PR00315 GTP-binding elongation factor signature 107 117 1.9E-13 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 80 95 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site ambt_12435 ad1384a416c2959e7f524297360e87c6 471 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 16 470 52.781 T 13-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 SUPERFAMILY SSF50447 237 326 1.06E-25 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_12435 ad1384a416c2959e7f524297360e87c6 471 SUPERFAMILY SSF52540 17 232 1.35E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12435 ad1384a416c2959e7f524297360e87c6 471 Gene3D G3DSA:3.40.50.300 1 236 2.6E-74 T 13-10-2018 ambt_12435 ad1384a416c2959e7f524297360e87c6 471 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 211 2.9E-13 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_21395 cf89fdb268771b814e50836ab94a9164 145 Gene3D G3DSA:3.30.700.10 23 138 5.9E-34 T 13-10-2018 ambt_21395 cf89fdb268771b814e50836ab94a9164 145 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 8 139 1.0E-48 T 13-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 ambt_21395 cf89fdb268771b814e50836ab94a9164 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 2.4E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_21395 cf89fdb268771b814e50836ab94a9164 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_21395 cf89fdb268771b814e50836ab94a9164 145 SUPERFAMILY SSF54523 36 140 1.05E-35 T 13-10-2018 ambt_21395 cf89fdb268771b814e50836ab94a9164 145 Pfam PF08334 Type II secretion system (T2SS), protein G 32 138 1.8E-34 T 13-10-2018 IPR013545 Type II secretion system protein G ambt_21395 cf89fdb268771b814e50836ab94a9164 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 1.9E-17 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ambt_21395 cf89fdb268771b814e50836ab94a9164 145 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 1.9E-17 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ambt_21395 cf89fdb268771b814e50836ab94a9164 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 6.2E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 32 536 2.4E-212 T 13-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 SUPERFAMILY SSF81442 28 536 5.49E-193 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 Gene3D G3DSA:1.20.210.10 19 537 1.1E-216 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 260 314 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 40 482 4.7E-152 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 441 462 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 105 129 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 391 410 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 178 196 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 304 319 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 328 349 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 31 56 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 258 279 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 363 381 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 78 101 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 148 160 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21740 20731f3524fa08d4397ef559e93dc01f 537 PRINTS PR01165 Cytochrome c oxidase subunit I signature 207 226 4.3E-122 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_04400 e0fdabdd239ad84697dda4e7355f4b6a 87 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 16 72 8.4E-21 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ambt_04400 e0fdabdd239ad84697dda4e7355f4b6a 87 PIRSF PIRSF006488 5 87 3.6E-22 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ambt_04400 e0fdabdd239ad84697dda4e7355f4b6a 87 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 16 76 14.944 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ambt_04400 e0fdabdd239ad84697dda4e7355f4b6a 87 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 10 56 2.0E-9 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ambt_04400 e0fdabdd239ad84697dda4e7355f4b6a 87 Pfam PF02609 Exonuclease VII small subunit 17 68 5.4E-19 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ambt_04400 e0fdabdd239ad84697dda4e7355f4b6a 87 Gene3D G3DSA:1.10.287.1040 10 86 1.3E-22 T 13-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 ambt_04400 e0fdabdd239ad84697dda4e7355f4b6a 87 SUPERFAMILY SSF116842 9 77 4.97E-20 T 13-10-2018 ambt_01825 5630c9dcdd589617ac105e9046782e2d 198 Pfam PF13580 SIS domain 9 144 2.3E-34 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ambt_01825 5630c9dcdd589617ac105e9046782e2d 198 Gene3D G3DSA:3.40.50.10490 1 194 1.2E-76 T 13-10-2018 ambt_01825 5630c9dcdd589617ac105e9046782e2d 198 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 36.801 T 13-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 ambt_01825 5630c9dcdd589617ac105e9046782e2d 198 SUPERFAMILY SSF53697 1 189 5.99E-56 T 13-10-2018 ambt_02940 5211254c708ffc70db997677e943e56d 412 SUPERFAMILY SSF56219 41 409 1.57E-23 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_02940 5211254c708ffc70db997677e943e56d 412 Gene3D G3DSA:3.60.10.10 40 412 1.7E-21 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_02940 5211254c708ffc70db997677e943e56d 412 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 45 402 7.7E-23 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ambt_20245 dadae0578adf2aeb0116c5ed30a0d5ca 197 Pfam PF13302 Acetyltransferase (GNAT) domain 13 151 3.7E-17 T 13-10-2018 IPR000182 GNAT domain ambt_20245 dadae0578adf2aeb0116c5ed30a0d5ca 197 Gene3D G3DSA:3.40.630.30 4 194 2.4E-43 T 13-10-2018 ambt_20245 dadae0578adf2aeb0116c5ed30a0d5ca 197 SUPERFAMILY SSF55729 9 177 4.94E-36 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 17 314 2.2E-100 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 16 316 33.445 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 Gene3D G3DSA:3.40.50.20 4 97 2.8E-28 T 13-10-2018 ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 SUPERFAMILY SSF52440 17 109 1.73E-26 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 Gene3D G3DSA:3.30.470.20 98 310 5.0E-73 T 13-10-2018 ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 PIRSF PIRSF039102 14 58 2.5E-7 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 PIRSF PIRSF039102 54 321 2.7E-83 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 Pfam PF01820 D-ala D-ala ligase N-terminus 17 98 2.3E-17 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 Pfam PF07478 D-ala D-ala ligase C-terminus 116 312 4.2E-61 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 SUPERFAMILY SSF56059 109 314 5.22E-53 T 13-10-2018 ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 258 286 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 Gene3D G3DSA:3.30.1490.20 124 193 5.0E-73 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ambt_02215 bb87db40ec86e699d9707c64902eeb32 322 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 76 87 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 SUPERFAMILY SSF52540 90 371 2.43E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 SMART SM00959 5 47 7.3E-17 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 Gene3D G3DSA:1.10.720.10 1 47 3.4E-22 T 13-10-2018 ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 Gene3D G3DSA:3.40.50.300 130 417 2.3E-132 T 13-10-2018 ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 SMART SM00382 170 355 7.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 SUPERFAMILY SSF68912 1 46 5.1E-12 T 13-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.7E-17 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.0E-22 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 249.096 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 Gene3D G3DSA:2.40.50.140 48 117 2.5E-34 T 13-10-2018 ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 1.3E-31 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 SMART SM00357 52 118 8.5E-17 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.3E-217 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ambt_15865 86be621e9ca614b8fd811f96a5b603b1 421 SUPERFAMILY SSF50249 48 125 9.71E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_10305 866cc8cf4dce40793e8058ee57cbb9b5 270 SUPERFAMILY SSF143422 2 136 1.14E-16 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 ambt_10620 502a18903ac6d4d92a14ff0ff7b312d4 378 Pfam PF00534 Glycosyl transferases group 1 193 340 1.5E-27 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_10620 502a18903ac6d4d92a14ff0ff7b312d4 378 SUPERFAMILY SSF53756 8 375 1.31E-54 T 13-10-2018 ambt_10620 502a18903ac6d4d92a14ff0ff7b312d4 378 Gene3D G3DSA:3.40.50.2000 188 361 5.1E-34 T 13-10-2018 ambt_10620 502a18903ac6d4d92a14ff0ff7b312d4 378 Pfam PF13439 Glycosyltransferase Family 4 108 179 8.9E-8 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ambt_10620 502a18903ac6d4d92a14ff0ff7b312d4 378 Gene3D G3DSA:3.40.50.2000 9 187 9.8E-11 T 13-10-2018 ambt_03300 ef256d8598451bbfc55f8dabe23cc1db 335 SUPERFAMILY SSF53335 50 333 5.55E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_03300 ef256d8598451bbfc55f8dabe23cc1db 335 PIRSF PIRSF029038 3 335 9.9E-127 T 13-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 ambt_03300 ef256d8598451bbfc55f8dabe23cc1db 335 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 12 335 49.732 T 13-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 ambt_03300 ef256d8598451bbfc55f8dabe23cc1db 335 Pfam PF05971 Protein of unknown function (DUF890) 11 334 1.6E-113 T 13-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 SUPERFAMILY SSF55252 81 150 1.44E-19 T 13-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 Pfam PF01316 Arginine repressor, DNA binding domain 4 73 1.8E-20 T 13-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 Hamap MF_00173 Arginine repressor [argR]. 1 154 58.681 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 TIGRFAM TIGR01529 argR_whole: arginine repressor 8 150 5.5E-42 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 SUPERFAMILY SSF46785 4 75 2.45E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 Pfam PF02863 Arginine repressor, C-terminal domain 81 148 3.4E-22 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 PRINTS PR01467 Bacterial arginine repressor signature 41 56 5.9E-22 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 PRINTS PR01467 Bacterial arginine repressor signature 24 37 5.9E-22 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 PRINTS PR01467 Bacterial arginine repressor signature 89 102 5.9E-22 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 PRINTS PR01467 Bacterial arginine repressor signature 120 135 5.9E-22 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 Gene3D G3DSA:3.30.1360.40 74 154 3.7E-30 T 13-10-2018 ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 Gene3D G3DSA:1.10.10.10 1 73 2.2E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_00410 2af702599611f10e1f4f1d8c92f0ed48 154 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 88 129 3.0E-16 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 ambt_17535 91a0829c0e5a02cc28095e632bb4a7bd 71 SUPERFAMILY SSF47616 1 68 1.39E-16 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_17535 91a0829c0e5a02cc28095e632bb4a7bd 71 Gene3D G3DSA:1.20.1050.10 1 61 1.2E-18 T 13-10-2018 ambt_17535 91a0829c0e5a02cc28095e632bb4a7bd 71 Pfam PF00043 Glutathione S-transferase, C-terminal domain 2 56 2.5E-7 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_00900 0e930dc4951733e1a004171337606793 766 Pfam PF00141 Peroxidase 424 730 1.3E-33 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00900 0e930dc4951733e1a004171337606793 766 Pfam PF00141 Peroxidase 101 416 1.8E-48 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00900 0e930dc4951733e1a004171337606793 766 Gene3D G3DSA:1.10.420.20 214 418 1.9E-196 T 13-10-2018 ambt_00900 0e930dc4951733e1a004171337606793 766 Gene3D G3DSA:1.10.520.10 454 756 3.9E-134 T 13-10-2018 ambt_00900 0e930dc4951733e1a004171337606793 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 76 89 3.4E-41 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00900 0e930dc4951733e1a004171337606793 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 50 72 3.4E-41 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00900 0e930dc4951733e1a004171337606793 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 91 116 3.4E-41 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00900 0e930dc4951733e1a004171337606793 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 501 527 3.4E-41 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00900 0e930dc4951733e1a004171337606793 766 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 285 308 3.4E-41 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00900 0e930dc4951733e1a004171337606793 766 SUPERFAMILY SSF48113 44 450 4.86E-140 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00900 0e930dc4951733e1a004171337606793 766 SUPERFAMILY SSF48113 451 756 2.06E-101 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00900 0e930dc4951733e1a004171337606793 766 Gene3D G3DSA:1.10.520.10 47 451 1.9E-196 T 13-10-2018 ambt_00900 0e930dc4951733e1a004171337606793 766 PRINTS PR00458 Haem peroxidase superfamily signature 174 191 3.7E-14 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00900 0e930dc4951733e1a004171337606793 766 PRINTS PR00458 Haem peroxidase superfamily signature 192 204 3.7E-14 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00900 0e930dc4951733e1a004171337606793 766 PRINTS PR00458 Haem peroxidase superfamily signature 277 292 3.7E-14 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00900 0e930dc4951733e1a004171337606793 766 PRINTS PR00458 Haem peroxidase superfamily signature 114 128 3.7E-14 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00900 0e930dc4951733e1a004171337606793 766 PRINTS PR00458 Haem peroxidase superfamily signature 337 352 3.7E-14 T 13-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_00900 0e930dc4951733e1a004171337606793 766 Gene3D G3DSA:1.10.420.10 609 732 3.9E-134 T 13-10-2018 ambt_00900 0e930dc4951733e1a004171337606793 766 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 42 757 0.0 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00900 0e930dc4951733e1a004171337606793 766 ProSitePatterns PS00436 Peroxidases active site signature. 114 125 - T 13-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 ambt_00900 0e930dc4951733e1a004171337606793 766 Hamap MF_01961 Catalase-peroxidase [katG]. 27 757 39.543 T 13-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 ambt_00900 0e930dc4951733e1a004171337606793 766 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 277 287 - T 13-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 ambt_03090 665c7b2a6a27d8dcca48a992cbb6470b 625 Pfam PF12633 Adenylate cyclase NT domain 3 183 6.6E-51 T 13-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 ambt_03090 665c7b2a6a27d8dcca48a992cbb6470b 625 Pfam PF01295 Adenylate cyclase, class-I 212 556 5.3E-60 T 13-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 SMART SM00387 343 453 2.4E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 SUPERFAMILY SSF55874 290 451 4.85E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 SUPERFAMILY SSF47384 222 300 1.57E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 451 6.4E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 300 1.9E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 Gene3D G3DSA:1.10.287.130 187 300 1.5E-33 T 13-10-2018 ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 Pfam PF00672 HAMP domain 183 233 1.1E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 SMART SM00304 183 237 1.4E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 SMART SM00388 238 300 6.9E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 1.2E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 1.2E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 1.2E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 SUPERFAMILY SSF158472 184 235 9.68E-10 T 13-10-2018 ambt_16040 a196bf540c2e0b3a6704f6615f443624 456 Gene3D G3DSA:3.30.565.10 305 452 1.1E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_02370 56bebc6a3fbbaf34f94dd137198811f5 274 Pfam PF08668 HDOD domain 15 204 3.3E-41 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD ambt_02370 56bebc6a3fbbaf34f94dd137198811f5 274 Gene3D G3DSA:1.10.3210.10 1 272 4.0E-47 T 13-10-2018 ambt_02370 56bebc6a3fbbaf34f94dd137198811f5 274 SUPERFAMILY SSF109604 12 267 7.22E-46 T 13-10-2018 ambt_08890 80a912a7ba7df8c09123499f50de4380 139 Pfam PF09842 Predicted membrane protein (DUF2069) 11 113 9.5E-33 T 13-10-2018 IPR018643 Protein of unknown function DUF2069, membrane ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 SMART SM01018 307 390 7.1E-45 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 588 858 2.6E-124 T 13-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 Gene3D G3DSA:3.20.20.20 2 295 2.3E-133 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 Gene3D G3DSA:1.10.288.10 586 742 2.2E-143 T 13-10-2018 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 Gene3D G3DSA:3.40.50.280 394 546 5.3E-56 T 13-10-2018 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 SUPERFAMILY SSF52242 393 545 1.83E-46 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 Pfam PF00809 Pterin binding enzyme 12 250 4.0E-61 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 Pfam PF02607 B12 binding domain 310 382 8.7E-26 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 PIRSF PIRSF000381 2 845 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 Pfam PF02310 B12 binding domain 399 493 1.5E-19 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 SUPERFAMILY SSF47644 302 389 4.97E-29 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 Gene3D G3DSA:3.10.196.10 559 872 2.2E-143 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 SUPERFAMILY SSF51717 8 282 4.84E-94 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 Gene3D G3DSA:1.10.1240.10 299 387 1.4E-39 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 TIGRFAM TIGR02082 metH: methionine synthase 4 842 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_13150 45b734c8f5dd636b9f3e909fd98a75db 874 SUPERFAMILY SSF56507 553 872 8.89E-127 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_01905 c7f78d76aac92646ebad490cd285a7c5 239 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 25 225 1.3E-116 T 13-10-2018 IPR014063 Arsenate resistance ArsH ambt_01905 c7f78d76aac92646ebad490cd285a7c5 239 SUPERFAMILY SSF52218 24 225 4.89E-61 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_01905 c7f78d76aac92646ebad490cd285a7c5 239 Pfam PF03358 NADPH-dependent FMN reductase 33 176 4.7E-28 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ambt_01905 c7f78d76aac92646ebad490cd285a7c5 239 Gene3D G3DSA:3.40.50.360 9 239 2.2E-72 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_19050 98871986efa1f81181bd2f349f8c6d96 206 Pfam PF01479 S4 domain 97 143 3.9E-20 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19050 98871986efa1f81181bd2f349f8c6d96 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 13-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19050 98871986efa1f81181bd2f349f8c6d96 206 Gene3D G3DSA:3.10.290.10 95 191 1.3E-81 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ambt_19050 98871986efa1f81181bd2f349f8c6d96 206 Gene3D G3DSA:1.10.1050.10 6 206 1.3E-81 T 13-10-2018 ambt_19050 98871986efa1f81181bd2f349f8c6d96 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.977 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ambt_19050 98871986efa1f81181bd2f349f8c6d96 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.4E-33 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ambt_19050 98871986efa1f81181bd2f349f8c6d96 206 SMART SM00363 96 160 3.4E-20 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19050 98871986efa1f81181bd2f349f8c6d96 206 SUPERFAMILY SSF55174 3 206 1.44E-74 T 13-10-2018 ambt_19050 98871986efa1f81181bd2f349f8c6d96 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.9E-87 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ambt_19050 98871986efa1f81181bd2f349f8c6d96 206 SMART SM01390 3 95 4.5E-52 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 Gene3D G3DSA:3.40.462.40 285 324 1.6E-6 T 13-10-2018 ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 Gene3D G3DSA:3.30.465.40 26 215 2.7E-20 T 13-10-2018 ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 Gene3D G3DSA:3.30.465.40 261 284 1.6E-6 T 13-10-2018 ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 Pfam PF13183 4Fe-4S dicluster domain 579 649 6.6E-10 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 Pfam PF02754 Cysteine-rich domain 819 894 9.8E-4 T 13-10-2018 IPR004017 Cysteine-rich domain ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 Pfam PF02913 FAD linked oxidases, C-terminal domain 285 556 5.9E-51 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 SUPERFAMILY SSF55103 289 563 9.16E-49 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 Gene3D G3DSA:1.10.1060.10 557 673 1.7E-8 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 Gene3D G3DSA:3.30.70.2740 434 517 1.8E-6 T 13-10-2018 ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 SUPERFAMILY SSF46548 537 661 9.94E-20 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 582 593 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 Gene3D G3DSA:1.10.45.10 518 556 3.3E-6 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 Pfam PF01565 FAD binding domain 60 196 1.2E-23 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ambt_15765 3c67aea398aebaa575b0e8dca0f9af0b 1037 SUPERFAMILY SSF56176 25 285 6.95E-51 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 Gene3D G3DSA:3.40.50.1170 1 207 5.3E-86 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 13-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 PRINTS PR00139 Asparaginase/glutaminase family signature 82 100 1.5E-13 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 1.5E-13 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 PRINTS PR00139 Asparaginase/glutaminase family signature 259 277 1.5E-13 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 PIRSF PIRSF001220 1 333 6.3E-90 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 83 93 - T 13-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 SMART SM00870 4 322 3.0E-133 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 334 4.8E-107 T 13-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 Gene3D G3DSA:3.40.50.40 208 335 1.0E-42 T 13-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 SUPERFAMILY SSF53774 2 334 2.75E-108 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 Pfam PF00710 Asparaginase, N-terminal 4 189 2.1E-64 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 ambt_09585 15cf952eefbaf96bedce3424944eab4c 335 PIRSF PIRSF500176 1 331 7.0E-105 T 13-10-2018 ambt_04135 239082eb086e71ba37f82cb830ee5321 306 Pfam PF01687 Riboflavin kinase 184 303 7.4E-35 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 ambt_04135 239082eb086e71ba37f82cb830ee5321 306 SUPERFAMILY SSF52374 16 175 5.07E-35 T 13-10-2018 ambt_04135 239082eb086e71ba37f82cb830ee5321 306 Pfam PF06574 FAD synthetase 12 167 3.0E-58 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ambt_04135 239082eb086e71ba37f82cb830ee5321 306 PIRSF PIRSF004491 1 306 7.2E-105 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ambt_04135 239082eb086e71ba37f82cb830ee5321 306 Gene3D G3DSA:3.40.50.620 1 186 4.1E-62 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_04135 239082eb086e71ba37f82cb830ee5321 306 SUPERFAMILY SSF82114 174 305 7.41E-43 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 ambt_04135 239082eb086e71ba37f82cb830ee5321 306 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 305 3.3E-99 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ambt_04135 239082eb086e71ba37f82cb830ee5321 306 SMART SM00904 183 306 2.5E-54 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 ambt_04135 239082eb086e71ba37f82cb830ee5321 306 Gene3D G3DSA:2.40.30.30 188 306 2.9E-38 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 Gene3D G3DSA:3.40.50.150 235 441 3.3E-67 T 13-10-2018 ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 SUPERFAMILY SSF48013 11 153 1.09E-25 T 13-10-2018 IPR035926 NusB-like superfamily ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 Pfam PF01029 NusB family 17 132 1.4E-16 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 Gene3D G3DSA:3.30.70.1170 177 234 7.6E-11 T 13-10-2018 ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 18 440 1.6E-119 T 13-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 Gene3D G3DSA:1.10.940.10 6 143 2.2E-34 T 13-10-2018 IPR035926 NusB-like superfamily ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 325 336 - T 13-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 423 440 1.4E-29 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 226 240 1.4E-29 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 326 338 1.4E-29 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 376 392 1.4E-29 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 255 265 1.4E-29 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 SUPERFAMILY SSF53335 142 440 2.55E-68 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_00095 670cdfe05cf8839b2f4594acd8fd267f 444 Pfam PF01189 16S rRNA methyltransferase RsmB/F 244 438 1.2E-65 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 ambt_00650 b56ece79a878aa1dca5e3ba51e9ace86 281 Pfam PF13460 NAD(P)H-binding 11 186 1.5E-9 T 13-10-2018 IPR016040 NAD(P)-binding domain ambt_00650 b56ece79a878aa1dca5e3ba51e9ace86 281 SUPERFAMILY SSF51735 1 249 1.19E-21 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_00650 b56ece79a878aa1dca5e3ba51e9ace86 281 Gene3D G3DSA:3.40.50.720 1 277 4.6E-44 T 13-10-2018 ambt_15275 3a63d3195a10a785cd8bff9b68c75d5c 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 193 2.0E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_15275 3a63d3195a10a785cd8bff9b68c75d5c 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 156 176 3.7E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_15275 3a63d3195a10a785cd8bff9b68c75d5c 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 3.7E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_15275 3a63d3195a10a785cd8bff9b68c75d5c 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 120 3.7E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_15275 3a63d3195a10a785cd8bff9b68c75d5c 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 3.7E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_15275 3a63d3195a10a785cd8bff9b68c75d5c 225 Gene3D G3DSA:1.10.150.240 23 94 1.5E-50 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ambt_15275 3a63d3195a10a785cd8bff9b68c75d5c 225 Gene3D G3DSA:3.40.50.1000 13 209 1.5E-50 T 13-10-2018 IPR023214 HAD superfamily ambt_15275 3a63d3195a10a785cd8bff9b68c75d5c 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 193 3.3E-32 T 13-10-2018 ambt_15275 3a63d3195a10a785cd8bff9b68c75d5c 225 SUPERFAMILY SSF56784 11 208 2.58E-45 T 13-10-2018 IPR036412 HAD-like superfamily ambt_07035 f9c256722bd6a1bca912b3d0a0e5603e 119 Pfam PF03658 RnfH family Ubiquitin 6 88 7.7E-34 T 13-10-2018 IPR005346 RnfH protein ambt_07035 f9c256722bd6a1bca912b3d0a0e5603e 119 SUPERFAMILY SSF54285 5 80 1.24E-25 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ambt_07035 f9c256722bd6a1bca912b3d0a0e5603e 119 Hamap MF_00460 Protein RnfH [rnfH]. 6 96 25.804 T 13-10-2018 IPR005346 RnfH protein ambt_07035 f9c256722bd6a1bca912b3d0a0e5603e 119 Gene3D G3DSA:3.10.20.280 2 90 1.1E-32 T 13-10-2018 IPR037021 RnfH superfamily ambt_01220 156409a6f925742f2f28d925d1d02c35 576 SUPERFAMILY SSF55073 419 571 3.06E-38 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_01220 156409a6f925742f2f28d925d1d02c35 576 Pfam PF07696 7TMR-DISM extracellular 2 66 136 8.1E-6 T 13-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 ambt_01220 156409a6f925742f2f28d925d1d02c35 576 Pfam PF07695 7TM diverse intracellular signalling 166 360 2.1E-10 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 ambt_01220 156409a6f925742f2f28d925d1d02c35 576 Gene3D G3DSA:3.30.70.270 400 573 1.7E-46 T 13-10-2018 ambt_01220 156409a6f925742f2f28d925d1d02c35 576 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 410 571 1.3E-38 T 13-10-2018 IPR000160 GGDEF domain ambt_01220 156409a6f925742f2f28d925d1d02c35 576 Pfam PF00990 Diguanylate cyclase, GGDEF domain 414 569 2.0E-37 T 13-10-2018 IPR000160 GGDEF domain ambt_01220 156409a6f925742f2f28d925d1d02c35 576 SMART SM00267 403 573 7.1E-45 T 13-10-2018 IPR000160 GGDEF domain ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 4.4E-288 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 Gene3D G3DSA:1.20.1270.10 524 607 7.7E-27 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 PRINTS PR00301 70kDa heat shock protein signature 198 208 6.6E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.6E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 PRINTS PR00301 70kDa heat shock protein signature 334 350 6.6E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.6E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.6E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 PRINTS PR00301 70kDa heat shock protein signature 138 158 6.6E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 PRINTS PR00301 70kDa heat shock protein signature 388 407 6.6E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 PRINTS PR00301 70kDa heat shock protein signature 365 385 6.6E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 PRINTS PR00301 70kDa heat shock protein signature 469 485 6.6E-80 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 Gene3D G3DSA:3.30.420.40 5 379 4.2E-167 T 13-10-2018 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 638 36.497 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 Gene3D G3DSA:2.60.34.10 383 523 1.0E-64 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 Gene3D G3DSA:3.90.640.10 229 316 4.2E-167 T 13-10-2018 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 Gene3D G3DSA:3.30.420.40 180 366 4.2E-167 T 13-10-2018 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 SUPERFAMILY SSF100920 384 540 2.62E-60 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 SUPERFAMILY SSF53067 4 184 5.55E-66 T 13-10-2018 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 SUPERFAMILY SSF100934 534 605 2.2E-6 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 SUPERFAMILY SSF53067 187 382 1.17E-66 T 13-10-2018 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ambt_11515 6ebb5c63f571f90b0ffc3a080eedf38c 644 Pfam PF00012 Hsp70 protein 4 602 1.5E-262 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ambt_04375 d8314479b29172b3878f83f711b9d05b 140 Gene3D G3DSA:1.10.940.10 1 139 8.2E-47 T 13-10-2018 IPR035926 NusB-like superfamily ambt_04375 d8314479b29172b3878f83f711b9d05b 140 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 133 2.3E-42 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 ambt_04375 d8314479b29172b3878f83f711b9d05b 140 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 4 135 22.253 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 ambt_04375 d8314479b29172b3878f83f711b9d05b 140 Pfam PF01029 NusB family 7 132 4.7E-33 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ambt_04375 d8314479b29172b3878f83f711b9d05b 140 SUPERFAMILY SSF48013 3 137 4.19E-39 T 13-10-2018 IPR035926 NusB-like superfamily ambt_16240 789b081132a7b2d07fc568f8b41f648d 402 PIRSF PIRSF000521 162 398 3.1E-33 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ambt_16240 789b081132a7b2d07fc568f8b41f648d 402 PIRSF PIRSF000521 23 152 3.5E-5 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ambt_16240 789b081132a7b2d07fc568f8b41f648d 402 Pfam PF00202 Aminotransferase class-III 16 395 8.3E-120 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ambt_16240 789b081132a7b2d07fc568f8b41f648d 402 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 395 8.9E-143 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ambt_16240 789b081132a7b2d07fc568f8b41f648d 402 SUPERFAMILY SSF53383 12 395 5.45E-123 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_16240 789b081132a7b2d07fc568f8b41f648d 402 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 67.97 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ambt_16240 789b081132a7b2d07fc568f8b41f648d 402 Gene3D G3DSA:3.90.1150.10 21 388 8.6E-146 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_16240 789b081132a7b2d07fc568f8b41f648d 402 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 218 255 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ambt_16240 789b081132a7b2d07fc568f8b41f648d 402 Gene3D G3DSA:3.40.640.10 55 300 8.6E-146 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_16240 789b081132a7b2d07fc568f8b41f648d 402 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 3 399 1.9E-210 T 13-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 ambt_01395 597b650968ccebdc91d1a55e53070196 194 Pfam PF06271 RDD family 39 177 1.1E-15 T 13-10-2018 IPR010432 RDD ambt_09565 f5f931335a9406f0ee8ca9e965162d1f 87 SUPERFAMILY SSF117991 1 87 7.46E-29 T 13-10-2018 IPR027471 YbeD-like domain superfamily ambt_09565 f5f931335a9406f0ee8ca9e965162d1f 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 6.1E-27 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 ambt_09565 f5f931335a9406f0ee8ca9e965162d1f 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 22.997 T 13-10-2018 IPR007454 Uncharacterised protein family UPF0250 ambt_09565 f5f931335a9406f0ee8ca9e965162d1f 87 Gene3D G3DSA:3.30.70.260 1 87 4.2E-29 T 13-10-2018 ambt_01665 21696be2db656800b9be9c3e29169592 195 Pfam PF10881 Protein of unknown function (DUF2726) 35 159 9.3E-38 T 13-10-2018 IPR024402 Domain of unknown function DUF2726 ambt_01665 21696be2db656800b9be9c3e29169592 195 PIRSF PIRSF028063 1 167 2.2E-15 T 13-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger ambt_08850 948eaba24ac0a2378f8f83c5314e339c 187 Gene3D G3DSA:3.30.70.260 1 86 3.2E-19 T 13-10-2018 ambt_08850 948eaba24ac0a2378f8f83c5314e339c 187 Gene3D G3DSA:3.30.70.260 91 182 3.5E-13 T 13-10-2018 ambt_08850 948eaba24ac0a2378f8f83c5314e339c 187 SUPERFAMILY SSF55021 2 84 1.06E-13 T 13-10-2018 ambt_08850 948eaba24ac0a2378f8f83c5314e339c 187 SUPERFAMILY SSF55021 93 170 1.54E-11 T 13-10-2018 ambt_08850 948eaba24ac0a2378f8f83c5314e339c 187 Pfam PF13740 ACT domain 4 78 9.6E-21 T 13-10-2018 ambt_08850 948eaba24ac0a2378f8f83c5314e339c 187 PIRSF PIRSF028103 2 175 3.4E-40 T 13-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 ambt_09445 04531044a7d6c70bf839c6fde2a4b7c2 180 Pfam PF11086 Protein of unknown function (DUF2878) 9 161 3.6E-41 T 13-10-2018 IPR021306 Protein of unknown function DUF2878 ambt_12410 21c6943bb839de2bdae9e0146caa2ea6 669 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 502 658 5.8E-38 T 13-10-2018 IPR000160 GGDEF domain ambt_12410 21c6943bb839de2bdae9e0146caa2ea6 669 SUPERFAMILY SSF55073 507 657 1.41E-34 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_12410 21c6943bb839de2bdae9e0146caa2ea6 669 SMART SM00267 490 659 3.4E-34 T 13-10-2018 IPR000160 GGDEF domain ambt_12410 21c6943bb839de2bdae9e0146caa2ea6 669 Gene3D G3DSA:3.30.70.270 500 663 2.1E-40 T 13-10-2018 ambt_12410 21c6943bb839de2bdae9e0146caa2ea6 669 Pfam PF00990 Diguanylate cyclase, GGDEF domain 503 654 1.6E-34 T 13-10-2018 IPR000160 GGDEF domain ambt_08260 bbf59975b50358127f27d1c7f7a15c6d 71 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 2.3E-20 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type ambt_08260 bbf59975b50358127f27d1c7f7a15c6d 71 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 47 1.1E-14 T 13-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type ambt_22200 7657aa9d0fca1739a190434d3f6eca72 214 Pfam PF02527 rRNA small subunit methyltransferase G 26 209 1.2E-61 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ambt_22200 7657aa9d0fca1739a190434d3f6eca72 214 Gene3D G3DSA:3.40.50.150 1 214 2.3E-69 T 13-10-2018 ambt_22200 7657aa9d0fca1739a190434d3f6eca72 214 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 19 210 27.631 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ambt_22200 7657aa9d0fca1739a190434d3f6eca72 214 PIRSF PIRSF003078 4 214 8.9E-62 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ambt_22200 7657aa9d0fca1739a190434d3f6eca72 214 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 33 213 5.8E-58 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ambt_22200 7657aa9d0fca1739a190434d3f6eca72 214 SUPERFAMILY SSF53335 9 213 5.83E-41 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 SUPERFAMILY SSF82693 554 654 2.82E-12 T 13-10-2018 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 Gene3D G3DSA:3.30.70.1440 652 847 0.0 T 13-10-2018 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 13-10-2018 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 SUPERFAMILY SSF82693 137 324 6.28E-20 T 13-10-2018 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 SUPERFAMILY SSF82714 702 787 2.88E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 SUPERFAMILY SSF82714 182 265 3.01E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 Gene3D G3DSA:3.30.70.1430 40 798 0.0 T 13-10-2018 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 SUPERFAMILY SSF82866 291 489 8.5E-48 T 13-10-2018 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 Gene3D G3DSA:3.30.70.1430 556 651 0.0 T 13-10-2018 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 13-10-2018 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 SUPERFAMILY SSF82693 40 134 2.96E-27 T 13-10-2018 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1006 4.4E-293 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.3E-80 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.3E-80 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.3E-80 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 1.3E-80 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 1.3E-80 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.3E-80 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.3E-80 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.3E-80 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.3E-80 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 Gene3D G3DSA:3.30.2090.10 701 790 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 SUPERFAMILY SSF82866 789 1009 3.27E-49 T 13-10-2018 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 Gene3D G3DSA:1.20.1640.10 502 1004 0.0 T 13-10-2018 ambt_15035 a311adedd5e02c83019b6ae56c238d5e 1036 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_03250 094a2da4f8543a91d5d489611455f1b1 458 Pfam PF00483 Nucleotidyl transferase 17 282 1.8E-57 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ambt_03250 094a2da4f8543a91d5d489611455f1b1 458 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 205 215 - T 13-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ambt_03250 094a2da4f8543a91d5d489611455f1b1 458 Gene3D G3DSA:2.160.10.10 296 419 4.6E-27 T 13-10-2018 ambt_03250 094a2da4f8543a91d5d489611455f1b1 458 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 15 387 3.8E-131 T 13-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ambt_03250 094a2da4f8543a91d5d489611455f1b1 458 SUPERFAMILY SSF53448 13 350 6.86E-67 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_03250 094a2da4f8543a91d5d489611455f1b1 458 SUPERFAMILY SSF51161 320 408 8.25E-15 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_03250 094a2da4f8543a91d5d489611455f1b1 458 Gene3D G3DSA:3.90.550.10 3 295 1.5E-79 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_03250 094a2da4f8543a91d5d489611455f1b1 458 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 11 413 41.339 T 13-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ambt_09140 5928cf1f89dd6c7957b236816d0abb07 549 SUPERFAMILY SSF54862 450 549 1.48E-28 T 13-10-2018 ambt_09140 5928cf1f89dd6c7957b236816d0abb07 549 SUPERFAMILY SSF51905 4 448 8.64E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_09140 5928cf1f89dd6c7957b236816d0abb07 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 546 5.1E-51 T 13-10-2018 ambt_09140 5928cf1f89dd6c7957b236816d0abb07 549 SUPERFAMILY SSF54373 211 305 5.89E-35 T 13-10-2018 ambt_09140 5928cf1f89dd6c7957b236816d0abb07 549 Gene3D G3DSA:3.50.50.60 7 386 3.8E-199 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_09140 5928cf1f89dd6c7957b236816d0abb07 549 Gene3D G3DSA:3.30.70.20 451 544 1.6E-38 T 13-10-2018 ambt_09140 5928cf1f89dd6c7957b236816d0abb07 549 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 57 1.5E-5 T 13-10-2018 ambt_09140 5928cf1f89dd6c7957b236816d0abb07 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 4.5E-6 T 13-10-2018 ambt_09140 5928cf1f89dd6c7957b236816d0abb07 549 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 179 194 4.5E-6 T 13-10-2018 ambt_09140 5928cf1f89dd6c7957b236816d0abb07 549 Gene3D G3DSA:3.30.9.90 79 450 3.8E-199 T 13-10-2018 ambt_05870 02137a7368b83de4590e4120fa62c9ff 132 SUPERFAMILY SSF51316 2 127 4.87E-57 T 13-10-2018 IPR011057 Mss4-like superfamily ambt_05870 02137a7368b83de4590e4120fa62c9ff 132 Gene3D G3DSA:2.170.150.20 1 128 2.1E-59 T 13-10-2018 ambt_05870 02137a7368b83de4590e4120fa62c9ff 132 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 125 36.283 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ambt_05870 02137a7368b83de4590e4120fa62c9ff 132 Pfam PF01641 SelR domain 5 123 3.8E-53 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ambt_05870 02137a7368b83de4590e4120fa62c9ff 132 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 2 125 1.8E-54 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 PRINTS PR00743 Glycosyl hydrolase family 36 signature 306 320 2.7E-42 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 PRINTS PR00743 Glycosyl hydrolase family 36 signature 334 349 2.7E-42 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 PRINTS PR00743 Glycosyl hydrolase family 36 signature 492 508 2.7E-42 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 PRINTS PR00743 Glycosyl hydrolase family 36 signature 517 533 2.7E-42 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 PRINTS PR00743 Glycosyl hydrolase family 36 signature 212 227 2.7E-42 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 PRINTS PR00743 Glycosyl hydrolase family 36 signature 384 406 2.7E-42 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 PRINTS PR00743 Glycosyl hydrolase family 36 signature 443 458 2.7E-42 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 Gene3D G3DSA:3.20.20.70 281 604 1.2E-122 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 623 706 6.5E-13 T 13-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 Gene3D G3DSA:2.70.98.60 2 280 4.9E-41 T 13-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 PIRSF PIRSF005536 1 700 7.2E-198 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 Gene3D G3DSA:2.60.40.1180 605 712 4.1E-8 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 Pfam PF02065 Melibiase 260 604 5.0E-122 T 13-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 25 246 1.5E-36 T 13-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 ambt_17295 7879db5ec85fdaca4de348e1c247c669 714 SUPERFAMILY SSF51445 302 631 1.66E-104 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_01595 accf180ddd1690720ea4ee8f2d8cd595 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 336 1.4E-83 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ambt_01595 accf180ddd1690720ea4ee8f2d8cd595 373 Gene3D G3DSA:3.20.20.70 4 367 1.4E-130 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_01595 accf180ddd1690720ea4ee8f2d8cd595 373 SUPERFAMILY SSF51395 5 364 1.37E-115 T 13-10-2018 ambt_17005 6582a6fba1f76a2a243f9495369001e4 254 Pfam PF01695 IstB-like ATP binding protein 56 232 5.9E-59 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ambt_17005 6582a6fba1f76a2a243f9495369001e4 254 PIRSF PIRSF003073 1 253 6.5E-71 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ambt_17005 6582a6fba1f76a2a243f9495369001e4 254 Pfam PF08483 IstB-like ATP binding N-terminal 27 55 6.6E-10 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal ambt_17005 6582a6fba1f76a2a243f9495369001e4 254 Gene3D G3DSA:3.40.50.300 64 247 5.0E-46 T 13-10-2018 ambt_17005 6582a6fba1f76a2a243f9495369001e4 254 SUPERFAMILY SSF52540 98 243 1.15E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_21150 6582a6fba1f76a2a243f9495369001e4 254 Pfam PF01695 IstB-like ATP binding protein 56 232 5.9E-59 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ambt_21150 6582a6fba1f76a2a243f9495369001e4 254 PIRSF PIRSF003073 1 253 6.5E-71 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ambt_21150 6582a6fba1f76a2a243f9495369001e4 254 Pfam PF08483 IstB-like ATP binding N-terminal 27 55 6.6E-10 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal ambt_21150 6582a6fba1f76a2a243f9495369001e4 254 Gene3D G3DSA:3.40.50.300 64 247 5.0E-46 T 13-10-2018 ambt_21150 6582a6fba1f76a2a243f9495369001e4 254 SUPERFAMILY SSF52540 98 243 1.15E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_05395 6582a6fba1f76a2a243f9495369001e4 254 Pfam PF01695 IstB-like ATP binding protein 56 232 5.9E-59 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ambt_05395 6582a6fba1f76a2a243f9495369001e4 254 PIRSF PIRSF003073 1 253 6.5E-71 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ambt_05395 6582a6fba1f76a2a243f9495369001e4 254 Pfam PF08483 IstB-like ATP binding N-terminal 27 55 6.6E-10 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal ambt_05395 6582a6fba1f76a2a243f9495369001e4 254 Gene3D G3DSA:3.40.50.300 64 247 5.0E-46 T 13-10-2018 ambt_05395 6582a6fba1f76a2a243f9495369001e4 254 SUPERFAMILY SSF52540 98 243 1.15E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00240 6582a6fba1f76a2a243f9495369001e4 254 Pfam PF01695 IstB-like ATP binding protein 56 232 5.9E-59 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ambt_00240 6582a6fba1f76a2a243f9495369001e4 254 PIRSF PIRSF003073 1 253 6.5E-71 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ambt_00240 6582a6fba1f76a2a243f9495369001e4 254 Pfam PF08483 IstB-like ATP binding N-terminal 27 55 6.6E-10 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal ambt_00240 6582a6fba1f76a2a243f9495369001e4 254 Gene3D G3DSA:3.40.50.300 64 247 5.0E-46 T 13-10-2018 ambt_00240 6582a6fba1f76a2a243f9495369001e4 254 SUPERFAMILY SSF52540 98 243 1.15E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20815 e2579442f2f2e35cd90e6d3edc2d16d8 901 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 14 901 0.0 T 13-10-2018 IPR022303 Conjugative transfer ATPase ambt_20815 e2579442f2f2e35cd90e6d3edc2d16d8 901 Gene3D G3DSA:3.40.50.300 685 858 2.5E-18 T 13-10-2018 ambt_20815 e2579442f2f2e35cd90e6d3edc2d16d8 901 Gene3D G3DSA:3.40.50.300 461 580 1.6E-8 T 13-10-2018 ambt_20815 e2579442f2f2e35cd90e6d3edc2d16d8 901 SUPERFAMILY SSF52540 443 828 5.41E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20815 e2579442f2f2e35cd90e6d3edc2d16d8 901 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 24 292 7.3E-65 T 13-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 SUPERFAMILY SSF53738 258 364 1.65E-28 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 4.0E-187 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 363 6.7E-29 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 135 7.3E-43 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 Gene3D G3DSA:3.30.310.50 370 447 1.2E-22 T 13-10-2018 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 3.1E-12 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 3.1E-12 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 3.1E-12 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 Gene3D G3DSA:3.40.120.10 3 154 1.5E-47 T 13-10-2018 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 9.0E-19 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 5.4E-13 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 Gene3D G3DSA:3.40.120.10 174 362 1.1E-59 T 13-10-2018 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 SUPERFAMILY SSF53738 156 257 7.06E-29 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 Gene3D G3DSA:3.40.120.10 257 339 1.1E-59 T 13-10-2018 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 46.418 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 SUPERFAMILY SSF55957 358 447 1.7E-20 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_09480 a89df7a25c0cc2d7254aeb80e41f2a17 447 SUPERFAMILY SSF53738 3 181 4.32E-48 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_03900 85f00110c27d20eb578980c6b833bcb3 292 SUPERFAMILY SSF52833 32 158 4.68E-12 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_03900 85f00110c27d20eb578980c6b833bcb3 292 Gene3D G3DSA:3.40.30.10 47 174 6.4E-12 T 13-10-2018 ambt_03900 85f00110c27d20eb578980c6b833bcb3 292 Pfam PF13098 Thioredoxin-like domain 50 158 4.5E-7 T 13-10-2018 IPR012336 Thioredoxin-like fold ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 376 3.9E-100 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 374 2.0E-7 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 SUPERFAMILY SSF51735 1 194 4.02E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 Gene3D G3DSA:3.40.50.720 222 388 2.2E-66 T 13-10-2018 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 Gene3D G3DSA:1.20.5.100 194 220 3.7E-20 T 13-10-2018 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 Gene3D G3DSA:3.40.50.720 1 193 1.7E-58 T 13-10-2018 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 SUPERFAMILY SSF48179 191 287 4.25E-30 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 5.1E-33 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 SMART SM00984 300 387 2.6E-13 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 SUPERFAMILY SSF52413 283 387 8.11E-26 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.0E-27 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 PIRSF PIRSF000124 1 388 2.1E-136 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 PIRSF PIRSF500134 1 343 1.5E-120 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 ambt_18865 c2cc21e6b01b389511da8969e7e2b8a4 388 PIRSF PIRSF500134 338 388 1.3 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 Gene3D G3DSA:2.40.50.140 1 66 4.4E-28 T 13-10-2018 ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 Pfam PF01330 RuvA N terminal domain 1 62 1.7E-22 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 Pfam PF07499 RuvA, C-terminal domain 163 204 7.4E-14 T 13-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 Pfam PF14520 Helix-hairpin-helix domain 72 130 9.0E-17 T 13-10-2018 ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 205 4.1E-59 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 SUPERFAMILY SSF47781 66 135 1.72E-20 T 13-10-2018 IPR010994 RuvA domain 2-like ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 SUPERFAMILY SSF46929 160 204 5.49E-11 T 13-10-2018 IPR036267 RuvA, C-terminal domain superfamily ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 206 31.231 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 Gene3D G3DSA:1.10.8.10 159 206 1.2E-18 T 13-10-2018 ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 SMART SM00278 73 92 190.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 SMART SM00278 108 127 0.08 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 Gene3D G3DSA:1.10.150.20 67 139 1.1E-25 T 13-10-2018 ambt_12120 be11ef3b6ed9281d7c0d2b6af1e54a00 206 SUPERFAMILY SSF50249 1 63 5.54E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_04540 dc9dbf14b1a2d1332bcb452cee057b89 249 Gene3D G3DSA:1.10.150.690 33 123 2.3E-28 T 13-10-2018 ambt_04540 dc9dbf14b1a2d1332bcb452cee057b89 249 Pfam PF09836 Putative DNA-binding domain 8 93 1.6E-24 T 13-10-2018 IPR018640 Putative DNA-binding domain, bacteria ambt_06085 faa3a3752bcdbf9258da732474269f49 394 Pfam PF00155 Aminotransferase class I and II 63 384 1.4E-41 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ambt_06085 faa3a3752bcdbf9258da732474269f49 394 SUPERFAMILY SSF53383 60 393 1.34E-69 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_06085 faa3a3752bcdbf9258da732474269f49 394 Gene3D G3DSA:3.40.640.10 77 297 1.2E-84 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_06085 faa3a3752bcdbf9258da732474269f49 394 Gene3D G3DSA:3.90.1150.10 61 381 1.2E-84 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_02910 453337773b8cf56bd68d134821010258 313 Pfam PF06481 COX Aromatic Rich Motif 235 280 4.1E-18 T 13-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 ambt_02910 453337773b8cf56bd68d134821010258 313 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 144 214 2.7E-6 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02910 453337773b8cf56bd68d134821010258 313 Gene3D G3DSA:2.60.40.420 109 277 5.2E-57 T 13-10-2018 IPR008972 Cupredoxin ambt_02910 453337773b8cf56bd68d134821010258 313 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 12 235 1.7E-108 T 13-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 ambt_02910 453337773b8cf56bd68d134821010258 313 SUPERFAMILY SSF49503 117 277 2.66E-50 T 13-10-2018 IPR008972 Cupredoxin ambt_02910 453337773b8cf56bd68d134821010258 313 Gene3D G3DSA:1.10.287.90 24 108 1.0E-30 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02910 453337773b8cf56bd68d134821010258 313 PIRSF PIRSF000292 2 307 5.2E-129 T 13-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 ambt_02910 453337773b8cf56bd68d134821010258 313 SUPERFAMILY SSF81464 14 113 6.38E-22 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 SUPERFAMILY SSF50249 6 144 2.57E-33 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 510 1.9E-196 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 Pfam PF00152 tRNA synthetases class II (D, K and N) 151 507 1.9E-82 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 Gene3D G3DSA:3.30.930.10 147 518 1.6E-130 T 13-10-2018 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 233 246 1.2E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 1.2E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 251 268 1.2E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 188 198 1.2E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 PRINTS PR00982 Lysyl-tRNA synthetase signature 392 408 1.2E-38 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 Pfam PF01336 OB-fold nucleic acid binding domain 63 132 1.0E-8 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 14 510 42.808 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 Gene3D G3DSA:2.40.50.140 1 146 1.1E-29 T 13-10-2018 ambt_12755 7edaa7d3110f4ba02db93498ea4cb63d 518 SUPERFAMILY SSF55681 151 508 4.4E-114 T 13-10-2018 ambt_09995 bf55d51be99278d3b8698cb4f45b3808 321 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 321 65.783 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ambt_09995 bf55d51be99278d3b8698cb4f45b3808 321 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 185 1.2E-27 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ambt_09995 bf55d51be99278d3b8698cb4f45b3808 321 Gene3D G3DSA:3.40.47.10 2 321 1.1E-119 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_09995 bf55d51be99278d3b8698cb4f45b3808 321 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 232 321 2.6E-34 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ambt_09995 bf55d51be99278d3b8698cb4f45b3808 321 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 321 1.3E-133 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ambt_09995 bf55d51be99278d3b8698cb4f45b3808 321 SUPERFAMILY SSF53901 4 321 2.04E-71 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_14000 d52266db954bcb893355d12573624547 519 Pfam PF00682 HMGL-like 4 273 1.3E-98 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ambt_14000 d52266db954bcb893355d12573624547 519 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ambt_14000 d52266db954bcb893355d12573624547 519 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ambt_14000 d52266db954bcb893355d12573624547 519 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 510 42.476 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ambt_14000 d52266db954bcb893355d12573624547 519 SUPERFAMILY SSF110921 390 499 6.41E-25 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ambt_14000 d52266db954bcb893355d12573624547 519 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 500 3.6E-33 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ambt_14000 d52266db954bcb893355d12573624547 519 SMART SM00917 369 501 3.1E-37 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ambt_14000 d52266db954bcb893355d12573624547 519 Gene3D G3DSA:1.10.238.260 280 393 2.0E-33 T 13-10-2018 ambt_14000 d52266db954bcb893355d12573624547 519 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 498 9.7E-234 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ambt_14000 d52266db954bcb893355d12573624547 519 SUPERFAMILY SSF51569 1 291 2.01E-100 T 13-10-2018 ambt_14000 d52266db954bcb893355d12573624547 519 Gene3D G3DSA:3.20.20.70 1 277 8.7E-108 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_14000 d52266db954bcb893355d12573624547 519 Gene3D G3DSA:3.30.160.270 394 501 8.3E-13 T 13-10-2018 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 SUPERFAMILY SSF88659 164 240 1.51E-20 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_13205 f7920605eb015591d8fe0ece19687de8 243 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 44 57 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 Pfam PF04542 Sigma-70 region 2 17 89 6.2E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 Pfam PF04539 Sigma-70 region 3 98 141 5.8E-6 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 Gene3D G3DSA:1.10.1740.10 2 86 8.2E-30 T 13-10-2018 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 PIRSF PIRSF000770 3 242 1.8E-32 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 17 236 1.8E-81 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 SUPERFAMILY SSF88946 9 89 5.49E-24 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 235 2.9E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 Gene3D G3DSA:1.20.140.160 88 237 3.8E-41 T 13-10-2018 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 6 238 63.721 T 13-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 Pfam PF04545 Sigma-70, region 4 184 232 1.1E-17 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 SUPERFAMILY SSF88659 91 155 1.74E-10 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_13205 f7920605eb015591d8fe0ece19687de8 243 PRINTS PR00046 Major sigma-70 factor signature 44 57 6.7E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 PRINTS PR00046 Major sigma-70 factor signature 188 200 6.7E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 PRINTS PR00046 Major sigma-70 factor signature 220 231 6.7E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_13205 f7920605eb015591d8fe0ece19687de8 243 PRINTS PR00046 Major sigma-70 factor signature 205 220 6.7E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_03385 8ff19a71e51b4dae1153b28486c5ff73 1100 Gene3D G3DSA:2.60.40.10 46 143 4.6E-19 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_03385 8ff19a71e51b4dae1153b28486c5ff73 1100 Gene3D G3DSA:2.60.40.3010 144 228 5.0E-15 T 13-10-2018 ambt_03385 8ff19a71e51b4dae1153b28486c5ff73 1100 SMART SM00089 49 138 4.5E-4 T 13-10-2018 IPR022409 PKD/Chitinase domain ambt_03385 8ff19a71e51b4dae1153b28486c5ff73 1100 SMART SM00089 179 289 6.5 T 13-10-2018 IPR022409 PKD/Chitinase domain ambt_03385 8ff19a71e51b4dae1153b28486c5ff73 1100 SUPERFAMILY SSF49299 45 137 2.47E-5 T 13-10-2018 IPR035986 PKD domain superfamily ambt_03385 8ff19a71e51b4dae1153b28486c5ff73 1100 ProSitePatterns PS00018 EF-hand calcium-binding domain. 736 748 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_16800 28be3687dc184328071d08d4c56bdfcf 549 Pfam PF13175 AAA ATPase domain 1 80 6.3E-11 T 13-10-2018 ambt_16800 28be3687dc184328071d08d4c56bdfcf 549 Pfam PF13175 AAA ATPase domain 164 335 1.5E-19 T 13-10-2018 ambt_16800 28be3687dc184328071d08d4c56bdfcf 549 SUPERFAMILY SSF52540 1 351 6.55E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_16800 28be3687dc184328071d08d4c56bdfcf 549 Gene3D G3DSA:3.40.50.300 1 355 2.3E-25 T 13-10-2018 ambt_19790 3f536486725716f6e4a5672d45837be8 219 Gene3D G3DSA:1.20.1050.10 88 191 1.8E-45 T 13-10-2018 ambt_19790 3f536486725716f6e4a5672d45837be8 219 SUPERFAMILY SSF52833 1 81 2.78E-23 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_19790 3f536486725716f6e4a5672d45837be8 219 Gene3D G3DSA:3.40.30.10 1 87 8.6E-35 T 13-10-2018 ambt_19790 3f536486725716f6e4a5672d45837be8 219 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 77 1.2E-14 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_19790 3f536486725716f6e4a5672d45837be8 219 Pfam PF00043 Glutathione S-transferase, C-terminal domain 126 192 8.3E-8 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_19790 3f536486725716f6e4a5672d45837be8 219 SUPERFAMILY SSF47616 74 199 3.06E-34 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Pfam PF08447 PAS fold 423 507 3.5E-14 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SUPERFAMILY SSF52172 772 896 1.42E-30 T 13-10-2018 IPR011006 CheY-like superfamily ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SUPERFAMILY SSF47384 518 600 2.55E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Pfam PF00072 Response regulator receiver domain 777 888 3.2E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 393 1.9E-16 T 13-10-2018 IPR000014 PAS domain ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 394 521 3.8E-12 T 13-10-2018 IPR000014 PAS domain ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SMART SM00387 646 757 3.1E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Pfam PF13426 PAS domain 281 383 2.2E-9 T 13-10-2018 IPR000014 PAS domain ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 647 755 3.9E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SMART SM00388 534 599 6.1E-22 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Gene3D G3DSA:3.30.450.20 396 510 9.1E-23 T 13-10-2018 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SUPERFAMILY SSF55785 385 512 2.42E-17 T 13-10-2018 IPR035965 PAS domain superfamily ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Pfam PF00512 His Kinase A (phospho-acceptor) domain 535 599 5.3E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Gene3D G3DSA:3.30.450.20 267 388 7.8E-22 T 13-10-2018 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SUPERFAMILY SSF47226 874 1002 6.28E-14 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SMART SM00448 775 891 4.8E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Gene3D G3DSA:3.30.565.10 598 758 2.1E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Gene3D G3DSA:1.10.287.130 511 597 1.6E-26 T 13-10-2018 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 682 696 5.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 717 735 5.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 741 754 5.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 PRINTS PR00344 Bacterial sensor protein C-terminal signature 700 710 5.9E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SUPERFAMILY SSF55874 588 758 2.88E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SMART SM00086 346 386 66.0 T 13-10-2018 IPR001610 PAC motif ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SMART SM00086 472 514 8.4E-7 T 13-10-2018 IPR001610 PAC motif ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Gene3D G3DSA:1.20.120.160 918 1025 1.9E-11 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SUPERFAMILY SSF55785 281 395 6.6E-19 T 13-10-2018 IPR035965 PAS domain superfamily ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SMART SM00091 270 336 1.4E-5 T 13-10-2018 IPR000014 PAS domain ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 SMART SM00091 398 470 0.3 T 13-10-2018 IPR000014 PAS domain ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Gene3D G3DSA:3.40.50.2300 770 895 5.3E-31 T 13-10-2018 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Pfam PF01627 Hpt domain 941 1015 5.5E-8 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Pfam PF03707 Bacterial signalling protein N terminal repeat 129 173 3.4E-11 T 13-10-2018 IPR005330 MHYT domain ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Pfam PF03707 Bacterial signalling protein N terminal repeat 66 124 5.3E-15 T 13-10-2018 IPR005330 MHYT domain ambt_06670 f8e9975f640cf4a44d609004de1d0822 1109 Pfam PF03707 Bacterial signalling protein N terminal repeat 199 264 2.6E-9 T 13-10-2018 IPR005330 MHYT domain ambt_21455 8e76ce491e7ca1d6f7e550ac2394290e 187 SUPERFAMILY SSF55811 5 185 1.62E-39 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ambt_21455 8e76ce491e7ca1d6f7e550ac2394290e 187 ProSitePatterns PS00893 Nudix box signature. 84 105 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ambt_21455 8e76ce491e7ca1d6f7e550ac2394290e 187 Pfam PF00293 NUDIX domain 50 159 7.5E-14 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ambt_21455 8e76ce491e7ca1d6f7e550ac2394290e 187 Gene3D G3DSA:3.90.79.10 11 187 2.2E-50 T 13-10-2018 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 Gene3D G3DSA:3.30.300.20 369 451 3.0E-21 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta ambt_03990 95a9d15608628be4e4318a04a63e4752 481 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 449 8.4E-176 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 SUPERFAMILY SSF52540 184 455 1.0E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_03990 95a9d15608628be4e4318a04a63e4752 481 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 192 357 2.3E-22 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 154 1.6E-21 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 Hamap MF_00195 GTPase Der [der]. 2 452 38.556 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 369 449 4.8E-27 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like ambt_03990 95a9d15608628be4e4318a04a63e4752 481 Pfam PF01926 50S ribosome-binding GTPase 196 313 1.9E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 Pfam PF01926 50S ribosome-binding GTPase 5 119 5.1E-28 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 Gene3D G3DSA:3.40.50.300 188 364 2.4E-46 T 13-10-2018 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 PIRSF PIRSF006485 1 457 2.2E-176 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 3.0E-11 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.0E-11 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 3.0E-11 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 SUPERFAMILY SSF52540 4 183 1.85E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_03990 95a9d15608628be4e4318a04a63e4752 481 Gene3D G3DSA:3.40.50.300 2 159 1.4E-42 T 13-10-2018 ambt_03990 95a9d15608628be4e4318a04a63e4752 481 SMART SM00382 192 339 0.0033 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_03990 95a9d15608628be4e4318a04a63e4752 481 SMART SM00382 1 177 0.91 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_11295 e80efecb02ee735e59ef11d18f737314 241 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 59 227 6.6E-21 T 13-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 ambt_11295 e80efecb02ee735e59ef11d18f737314 241 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 61 227 5.8E-36 T 13-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 ambt_15480 14ae0f4a1cbb041f9937a6a374656e14 243 Gene3D G3DSA:3.90.550.10 1 240 5.8E-68 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_15480 14ae0f4a1cbb041f9937a6a374656e14 243 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 231 4.3E-66 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ambt_15480 14ae0f4a1cbb041f9937a6a374656e14 243 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 233 1.1E-71 T 13-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ambt_15480 14ae0f4a1cbb041f9937a6a374656e14 243 SUPERFAMILY SSF53448 6 232 4.8E-58 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_15480 14ae0f4a1cbb041f9937a6a374656e14 243 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 5 232 39.709 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ambt_16185 9c2eaea70df64cd0d5f197cf2b1fc082 504 Pfam PF05036 Sporulation related domain 415 478 7.7E-5 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 ambt_16185 9c2eaea70df64cd0d5f197cf2b1fc082 504 Gene3D G3DSA:3.30.70.1070 411 498 2.6E-13 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ambt_05520 3d1789dc52e69d67bbd7d8ac9b81c4c0 320 SUPERFAMILY SSF53590 1 315 4.19E-86 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like ambt_05520 3d1789dc52e69d67bbd7d8ac9b81c4c0 320 Gene3D G3DSA:3.90.245.10 1 318 4.4E-99 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like ambt_05520 3d1789dc52e69d67bbd7d8ac9b81c4c0 320 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 308 2.5E-77 T 13-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ambt_04650 1e58cac512d2c4af39a8b906105c8aaf 245 SUPERFAMILY SSF51366 1 242 2.49E-66 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ambt_04650 1e58cac512d2c4af39a8b906105c8aaf 245 Gene3D G3DSA:3.20.20.70 1 245 2.4E-93 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_04650 1e58cac512d2c4af39a8b906105c8aaf 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.958 T 13-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 ambt_04650 1e58cac512d2c4af39a8b906105c8aaf 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.2E-78 T 13-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 ambt_04650 1e58cac512d2c4af39a8b906105c8aaf 245 Pfam PF00977 Histidine biosynthesis protein 1 234 9.2E-77 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 ambt_15575 113a7d18d78073b0f142cd258a4c6cf5 322 Pfam PF00589 Phage integrase family 105 307 1.5E-41 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_15575 113a7d18d78073b0f142cd258a4c6cf5 322 Gene3D G3DSA:1.10.150.130 1 94 7.3E-28 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_15575 113a7d18d78073b0f142cd258a4c6cf5 322 Gene3D G3DSA:1.10.443.10 95 310 1.8E-66 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_15575 113a7d18d78073b0f142cd258a4c6cf5 322 SUPERFAMILY SSF56349 101 316 1.71E-45 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_15575 113a7d18d78073b0f142cd258a4c6cf5 322 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 6 87 2.9E-23 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ambt_15575 113a7d18d78073b0f142cd258a4c6cf5 322 TIGRFAM TIGR02249 integrase_gron: integron integrase 5 320 1.5E-138 T 13-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Pfam PF04563 RNA polymerase beta subunit 26 501 1.2E-53 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Gene3D G3DSA:3.90.1800.10 1252 1306 8.1E-11 T 13-10-2018 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 357 455 1.1E-16 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 152 226 3.7E-7 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Gene3D G3DSA:3.90.1110.10 305 442 4.8E-36 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 514 581 4.1E-30 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1341 3.2E-27 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Gene3D G3DSA:2.40.270.10 1036 1242 5.2E-89 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Gene3D G3DSA:2.40.270.10 791 833 7.0E-7 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Gene3D G3DSA:3.90.1100.10 18 173 3.7E-57 T 13-10-2018 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Gene3D G3DSA:3.90.1100.10 647 714 6.1E-21 T 13-10-2018 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1064 1076 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Gene3D G3DSA:2.40.50.150 834 954 1.1E-43 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Gene3D G3DSA:2.40.50.100 715 789 4.5E-32 T 13-10-2018 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 592 657 1.2E-20 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Gene3D G3DSA:3.90.1100.10 443 630 1.2E-69 T 13-10-2018 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 718 1264 2.9E-157 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 SUPERFAMILY SSF64484 11 1340 0.0 T 13-10-2018 ambt_19635 2f81a14c0aa9cd286ebad2608522a8aa 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.276 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SUPERFAMILY SSF48452 628 920 7.59E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 Pfam PF14559 Tetratricopeptide repeat 672 729 8.8E-7 T 13-10-2018 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 Pfam PF14559 Tetratricopeptide repeat 213 272 3.5E-7 T 13-10-2018 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 Pfam PF14559 Tetratricopeptide repeat 870 915 7.5E-6 T 13-10-2018 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SUPERFAMILY SSF48452 35 117 1.45E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 17 915 1.5E-112 T 13-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 32 65 140.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 168 201 27.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 857 890 120.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 891 924 44.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 312 345 380.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 720 753 0.005 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 618 651 150.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 482 515 0.0037 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 134 167 250.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 516 549 320.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 236 269 300.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SMART SM00028 202 235 0.0098 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 Gene3D G3DSA:1.25.40.10 648 765 1.3E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SUPERFAMILY SSF48452 308 629 8.63E-28 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 Gene3D G3DSA:1.25.40.10 288 644 1.1E-41 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 Gene3D G3DSA:1.25.40.10 122 287 2.5E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 Pfam PF13181 Tetratricopeptide repeat 482 514 1.1E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 SUPERFAMILY SSF48452 136 272 6.24E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 Gene3D G3DSA:1.25.40.10 766 922 1.8E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04475 f5e3e07d3d2a8f9882324537fa96ae1d 937 Gene3D G3DSA:1.25.40.10 35 110 4.5E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 327 2.9E-168 T 13-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 9.9E-31 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 9.9E-31 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 9.9E-31 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 9.9E-31 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 9.9E-31 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 Gene3D G3DSA:3.30.360.10 153 317 9.4E-129 T 13-10-2018 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 315 1.7E-54 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 SMART SM00846 2 154 1.0E-70 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 PIRSF PIRSF000149 1 336 3.5E-127 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 SUPERFAMILY SSF55347 154 316 2.32E-58 T 13-10-2018 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 SUPERFAMILY SSF51735 2 175 8.69E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 104 8.3E-35 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 Gene3D G3DSA:3.40.50.720 4 327 9.4E-129 T 13-10-2018 ambt_14395 a8d5e7bf2e1d4a5e5c9204229923f725 336 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 336 65.173 T 13-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 ambt_02455 b8d90a01a17c8dced4f06175bf92db2e 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.0E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_02455 b8d90a01a17c8dced4f06175bf92db2e 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.0E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_02455 b8d90a01a17c8dced4f06175bf92db2e 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.0E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_02455 b8d90a01a17c8dced4f06175bf92db2e 282 SUPERFAMILY SSF46785 2 82 3.13E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_02455 b8d90a01a17c8dced4f06175bf92db2e 282 Gene3D G3DSA:1.10.10.10 4 88 3.3E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_02455 b8d90a01a17c8dced4f06175bf92db2e 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 4.2E-12 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_02455 b8d90a01a17c8dced4f06175bf92db2e 282 SUPERFAMILY SSF53850 90 281 3.62E-25 T 13-10-2018 ambt_02455 b8d90a01a17c8dced4f06175bf92db2e 282 Gene3D G3DSA:3.40.190.10 96 260 7.3E-43 T 13-10-2018 ambt_02455 b8d90a01a17c8dced4f06175bf92db2e 282 Pfam PF03466 LysR substrate binding domain 89 240 2.1E-24 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_02455 b8d90a01a17c8dced4f06175bf92db2e 282 Gene3D G3DSA:3.40.190.10 163 254 7.3E-43 T 13-10-2018 ambt_14930 66e40f5a01e9f824060e798ceade044d 229 SMART SM00448 3 116 2.2E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_14930 66e40f5a01e9f824060e798ceade044d 229 Pfam PF00072 Response regulator receiver domain 5 117 5.6E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_14930 66e40f5a01e9f824060e798ceade044d 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 1.2E-110 T 13-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 ambt_14930 66e40f5a01e9f824060e798ceade044d 229 Gene3D G3DSA:1.10.10.10 128 229 4.7E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_14930 66e40f5a01e9f824060e798ceade044d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 8.1E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_14930 66e40f5a01e9f824060e798ceade044d 229 SUPERFAMILY SSF46894 127 226 3.4E-31 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_14930 66e40f5a01e9f824060e798ceade044d 229 Gene3D G3DSA:3.40.50.2300 1 127 3.3E-38 T 13-10-2018 ambt_14930 66e40f5a01e9f824060e798ceade044d 229 SMART SM00862 150 225 6.2E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_14930 66e40f5a01e9f824060e798ceade044d 229 SUPERFAMILY SSF52172 2 129 1.07E-42 T 13-10-2018 IPR011006 CheY-like superfamily ambt_13225 43fadb013c0dea3139c58c7e7041c800 376 Gene3D G3DSA:3.40.1690.10 218 358 3.3E-53 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ambt_13225 43fadb013c0dea3139c58c7e7041c800 376 SUPERFAMILY SSF160544 244 351 1.83E-37 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ambt_13225 43fadb013c0dea3139c58c7e7041c800 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 9.4E-113 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ambt_13225 43fadb013c0dea3139c58c7e7041c800 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 3.5E-36 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ambt_13225 43fadb013c0dea3139c58c7e7041c800 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 3.5E-36 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ambt_13225 43fadb013c0dea3139c58c7e7041c800 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 3.5E-36 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ambt_13225 43fadb013c0dea3139c58c7e7041c800 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 3.5E-36 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ambt_13225 43fadb013c0dea3139c58c7e7041c800 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 3.5E-36 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ambt_13225 43fadb013c0dea3139c58c7e7041c800 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 353 1.6E-118 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 ambt_15775 ae7b4926ebf15a6377e740c902852122 620 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 73 396 7.4E-81 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ambt_15775 ae7b4926ebf15a6377e740c902852122 620 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 310 327 - T 13-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 ambt_15775 ae7b4926ebf15a6377e740c902852122 620 Gene3D G3DSA:3.20.20.300 27 419 5.6E-109 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 ambt_15775 ae7b4926ebf15a6377e740c902852122 620 Gene3D G3DSA:3.40.50.1700 426 620 5.9E-10 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 ambt_15775 ae7b4926ebf15a6377e740c902852122 620 SUPERFAMILY SSF51445 68 405 1.03E-71 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_18480 d4a4182cd9725388c535cb1ee1fa133f 408 Pfam PF06738 Putative threonine/serine exporter 11 251 1.7E-60 T 13-10-2018 IPR010619 Putative threonine/serine exporter ambt_18480 d4a4182cd9725388c535cb1ee1fa133f 408 Pfam PF12821 Threonine/Serine exporter, ThrE 276 400 6.6E-13 T 13-10-2018 IPR024528 Threonine/Serine exporter, ThrE ambt_13855 0d20238c32bd744edb6d8a368acf3a9c 608 Gene3D G3DSA:3.10.560.10 290 303 9.9E-14 T 13-10-2018 ambt_13855 0d20238c32bd744edb6d8a368acf3a9c 608 Gene3D G3DSA:3.10.560.10 128 289 9.9E-14 T 13-10-2018 ambt_13855 0d20238c32bd744edb6d8a368acf3a9c 608 Gene3D G3DSA:3.30.1950.10 133 204 9.9E-14 T 13-10-2018 ambt_13855 0d20238c32bd744edb6d8a368acf3a9c 608 Gene3D G3DSA:3.10.560.10 499 578 4.6E-8 T 13-10-2018 ambt_13855 0d20238c32bd744edb6d8a368acf3a9c 608 Pfam PF02563 Polysaccharide biosynthesis/export protein 127 200 3.1E-11 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Pfam PF00563 EAL domain 1256 1489 5.6E-69 T 13-10-2018 IPR001633 EAL domain ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 SMART SM00052 1248 1494 5.6E-108 T 13-10-2018 IPR001633 EAL domain ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 SUPERFAMILY SSF63829 55 259 2.68E-11 T 13-10-2018 ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 SUPERFAMILY SSF63829 370 590 1.07E-10 T 13-10-2018 ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 SUPERFAMILY SSF141868 1253 1503 8.5E-86 T 13-10-2018 IPR035919 EAL domain superfamily ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1079 1236 2.5E-33 T 13-10-2018 IPR000160 GGDEF domain ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 SMART SM00086 908 951 180.0 T 13-10-2018 IPR001610 PAC motif ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 SMART SM00086 1028 1070 9.7E-6 T 13-10-2018 IPR001610 PAC motif ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Pfam PF13426 PAS domain 970 1068 4.1E-12 T 13-10-2018 IPR000014 PAS domain ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Gene3D G3DSA:2.130.10.10 549 657 5.8E-7 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1081 1233 1.1E-40 T 13-10-2018 IPR000160 GGDEF domain ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Gene3D G3DSA:2.130.10.10 351 526 3.5E-15 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Gene3D G3DSA:3.30.450.20 829 946 2.5E-17 T 13-10-2018 ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Pfam PF07494 Two component regulator propeller 42 65 0.018 T 13-10-2018 IPR011110 Two component regulator propeller ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Pfam PF07494 Two component regulator propeller 88 109 0.012 T 13-10-2018 IPR011110 Two component regulator propeller ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 SUPERFAMILY SSF55073 1086 1240 5.57E-45 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 955 1077 3.4E-15 T 13-10-2018 IPR000014 PAS domain ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Gene3D G3DSA:2.130.10.10 31 349 6.0E-54 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Gene3D G3DSA:3.30.70.270 1076 1251 2.7E-54 T 13-10-2018 ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 SUPERFAMILY SSF55785 965 1068 5.93E-19 T 13-10-2018 IPR035965 PAS domain superfamily ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Gene3D G3DSA:2.60.40.10 670 804 1.7E-22 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Gene3D G3DSA:3.30.450.20 953 1073 2.3E-25 T 13-10-2018 ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 SMART SM00091 959 1026 0.0093 T 13-10-2018 IPR000014 PAS domain ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Pfam PF08447 PAS fold 871 944 1.6E-11 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 SMART SM00267 1070 1238 2.0E-53 T 13-10-2018 IPR000160 GGDEF domain ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Gene3D G3DSA:3.20.20.450 1252 1504 1.2E-95 T 13-10-2018 IPR035919 EAL domain superfamily ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 Pfam PF07495 Y_Y_Y domain 729 791 1.6E-12 T 13-10-2018 IPR011123 Two component regulator three Y ambt_12340 9e24ddd8aa8c9b814819e4954c74ab77 1514 SUPERFAMILY SSF55785 862 954 1.26E-8 T 13-10-2018 IPR035965 PAS domain superfamily ambt_18390 c2d96f5ceb646ede1b8049beb1e594ca 385 Gene3D G3DSA:3.20.20.70 1 335 8.1E-59 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_18390 c2d96f5ceb646ede1b8049beb1e594ca 385 Hamap MF_01611 FO synthase subunit 1 [cofG]. 37 362 47.391 T 13-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 ambt_18390 c2d96f5ceb646ede1b8049beb1e594ca 385 SUPERFAMILY SSF102114 15 331 9.29E-38 T 13-10-2018 ambt_18390 c2d96f5ceb646ede1b8049beb1e594ca 385 Pfam PF04055 Radical SAM superfamily 46 222 5.1E-8 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_18390 c2d96f5ceb646ede1b8049beb1e594ca 385 SMART SM00729 41 268 4.2E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ambt_18390 c2d96f5ceb646ede1b8049beb1e594ca 385 TIGRFAM TIGR03550 F420_cofG: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit 38 358 1.4E-140 T 13-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 ambt_18355 6f0e9e2a58cb2465692e57ab45c16040 483 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 456 4.7E-176 T 13-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 ambt_18355 6f0e9e2a58cb2465692e57ab45c16040 483 Gene3D G3DSA:2.30.40.10 3 463 9.6E-194 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_18355 6f0e9e2a58cb2465692e57ab45c16040 483 SUPERFAMILY SSF51338 1 67 1.06E-13 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_18355 6f0e9e2a58cb2465692e57ab45c16040 483 SUPERFAMILY SSF51556 55 384 5.27E-107 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_18355 6f0e9e2a58cb2465692e57ab45c16040 483 Gene3D G3DSA:3.20.20.140 55 425 9.6E-194 T 13-10-2018 ambt_18355 6f0e9e2a58cb2465692e57ab45c16040 483 SUPERFAMILY SSF51338 347 459 2.8E-37 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_18355 6f0e9e2a58cb2465692e57ab45c16040 483 Pfam PF01979 Amidohydrolase family 51 437 6.3E-35 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ambt_22010 a4366706a859d79b1ceebb19cc17a8ac 65 Pfam PF12728 Helix-turn-helix domain 6 54 5.9E-18 T 13-10-2018 ambt_22010 a4366706a859d79b1ceebb19cc17a8ac 65 SUPERFAMILY SSF46955 5 53 1.43E-10 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily ambt_22010 a4366706a859d79b1ceebb19cc17a8ac 65 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 6 53 3.4E-21 T 13-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 ambt_22010 a4366706a859d79b1ceebb19cc17a8ac 65 Gene3D G3DSA:1.10.1660.10 3 56 8.5E-13 T 13-10-2018 ambt_15925 4ab488f86715f0d5f25c1c72c551ccef 165 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 160 6.1E-59 T 13-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ambt_15925 4ab488f86715f0d5f25c1c72c551ccef 165 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 2.0E-33 T 13-10-2018 ambt_15925 4ab488f86715f0d5f25c1c72c551ccef 165 SUPERFAMILY SSF55021 2 76 2.52E-22 T 13-10-2018 ambt_15925 4ab488f86715f0d5f25c1c72c551ccef 165 Pfam PF10369 Small subunit of acetolactate synthase 84 159 5.4E-22 T 13-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ambt_15925 4ab488f86715f0d5f25c1c72c551ccef 165 Gene3D G3DSA:3.30.70.1150 80 158 1.2E-24 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal ambt_15925 4ab488f86715f0d5f25c1c72c551ccef 165 Pfam PF13710 ACT domain 11 73 7.7E-17 T 13-10-2018 ambt_15925 4ab488f86715f0d5f25c1c72c551ccef 165 Gene3D G3DSA:3.30.70.260 1 78 1.6E-33 T 13-10-2018 ambt_15925 4ab488f86715f0d5f25c1c72c551ccef 165 SUPERFAMILY SSF55021 79 163 8.59E-23 T 13-10-2018 ambt_05325 96b2f19454d14ed8ff30fc6bdb5de04d 374 SUPERFAMILY SSF56349 79 350 9.71E-44 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_05325 96b2f19454d14ed8ff30fc6bdb5de04d 374 Gene3D G3DSA:1.10.150.130 70 179 1.2E-12 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_05325 96b2f19454d14ed8ff30fc6bdb5de04d 374 Pfam PF00589 Phage integrase family 185 348 1.3E-14 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_05325 96b2f19454d14ed8ff30fc6bdb5de04d 374 Gene3D G3DSA:1.10.443.10 182 352 1.8E-28 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_05325 96b2f19454d14ed8ff30fc6bdb5de04d 374 Pfam PF12167 Arm DNA-binding domain 6 69 4.2E-14 T 13-10-2018 IPR022000 Min27-like integrase, DNA-binding domain ambt_02425 011a8cfea2007514bd8b10e100583881 413 Gene3D G3DSA:3.50.50.60 5 356 1.6E-83 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_02425 011a8cfea2007514bd8b10e100583881 413 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 408 3.9E-101 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 ambt_02425 011a8cfea2007514bd8b10e100583881 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 169 184 2.5E-13 T 13-10-2018 ambt_02425 011a8cfea2007514bd8b10e100583881 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.5E-13 T 13-10-2018 ambt_02425 011a8cfea2007514bd8b10e100583881 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 317 333 2.5E-13 T 13-10-2018 ambt_02425 011a8cfea2007514bd8b10e100583881 413 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 317 2.5E-13 T 13-10-2018 ambt_02425 011a8cfea2007514bd8b10e100583881 413 Gene3D G3DSA:3.30.9.50 96 291 1.6E-83 T 13-10-2018 ambt_02425 011a8cfea2007514bd8b10e100583881 413 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 316 329 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 ambt_02425 011a8cfea2007514bd8b10e100583881 413 Pfam PF01494 FAD binding domain 5 362 7.4E-24 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 ambt_02425 011a8cfea2007514bd8b10e100583881 413 SUPERFAMILY SSF51905 4 402 4.67E-44 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_08995 599c22ec53f2cd118581c2228bd7333a 321 Gene3D G3DSA:3.40.50.1100 42 144 1.5E-123 T 13-10-2018 ambt_08995 599c22ec53f2cd118581c2228bd7333a 321 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 310 1.1E-138 T 13-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ambt_08995 599c22ec53f2cd118581c2228bd7333a 321 Gene3D G3DSA:3.40.50.1100 11 305 1.5E-123 T 13-10-2018 ambt_08995 599c22ec53f2cd118581c2228bd7333a 321 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 310 1.0E-131 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ambt_08995 599c22ec53f2cd118581c2228bd7333a 321 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ambt_08995 599c22ec53f2cd118581c2228bd7333a 321 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 296 2.4E-70 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ambt_08995 599c22ec53f2cd118581c2228bd7333a 321 SUPERFAMILY SSF53686 4 308 4.45E-96 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 2.1E-8 T 13-10-2018 ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.1E-8 T 13-10-2018 ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 2.1E-8 T 13-10-2018 ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 SUPERFAMILY SSF160996 190 337 3.4E-41 T 13-10-2018 ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 Gene3D G3DSA:1.10.8.260 261 321 1.2E-129 T 13-10-2018 IPR023166 HI0933-like insert domain superfamily ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 Gene3D G3DSA:3.50.50.60 6 390 1.2E-129 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 Pfam PF03486 HI0933-like protein 5 391 4.4E-152 T 13-10-2018 ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 1.1E-6 T 13-10-2018 ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.1E-6 T 13-10-2018 ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.1E-6 T 13-10-2018 ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 Gene3D G3DSA:2.40.30.10 188 338 1.2E-129 T 13-10-2018 ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 SUPERFAMILY SSF51905 3 393 1.86E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_18260 0514dfe84abbf4ad7ab07dc5757e41fb 393 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 391 5.6E-132 T 13-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like ambt_13545 12a16da984c0d3677690220270f2e2f4 409 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 332 408 1.1E-19 T 13-10-2018 IPR032388 Flagellar assembly protein T, C-terminal ambt_13545 12a16da984c0d3677690220270f2e2f4 409 Gene3D G3DSA:3.40.50.10610 140 323 4.0E-44 T 13-10-2018 ambt_13545 12a16da984c0d3677690220270f2e2f4 409 Gene3D G3DSA:2.40.10.410 324 409 3.1E-13 T 13-10-2018 IPR038165 FlgT, C-terminal domain superfamily ambt_13545 12a16da984c0d3677690220270f2e2f4 409 Gene3D G3DSA:3.30.1660.40 49 139 3.2E-28 T 13-10-2018 IPR038180 FlgT, N-terminal domain superfamily ambt_13545 12a16da984c0d3677690220270f2e2f4 409 Pfam PF16539 Flagellar assembly protein T, middle domain 139 288 1.8E-42 T 13-10-2018 IPR032386 Flagellar assembly protein T, middle domain ambt_13545 12a16da984c0d3677690220270f2e2f4 409 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 49 136 1.0E-26 T 13-10-2018 IPR032370 Flagellar assembly protein T, N-terminal ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 PIRSF PIRSF000188 1 352 2.8E-138 T 13-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 SUPERFAMILY SSF51735 150 348 1.23E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 SMART SM00839 149 352 7.6E-68 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 Gene3D G3DSA:3.40.50.10860 11 348 6.7E-132 T 13-10-2018 ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 23 129 3.9E-24 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 290 301 1.3E-12 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 1.3E-12 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 180 200 1.3E-12 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 222 325 1.2E-10 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 SUPERFAMILY SSF53223 4 140 2.49E-40 T 13-10-2018 ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 13-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ambt_12985 ed0a1920df00abe5bdd7775b5c27b8a8 352 Gene3D G3DSA:3.40.50.720 134 341 6.7E-132 T 13-10-2018 ambt_13520 364480ab4e6abd806b8161f5e1e1e37a 309 Pfam PF00072 Response regulator receiver domain 181 300 1.1E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_13520 364480ab4e6abd806b8161f5e1e1e37a 309 Gene3D G3DSA:3.40.50.2300 168 307 1.6E-25 T 13-10-2018 ambt_13520 364480ab4e6abd806b8161f5e1e1e37a 309 Gene3D G3DSA:2.40.50.180 39 153 1.1E-27 T 13-10-2018 ambt_13520 364480ab4e6abd806b8161f5e1e1e37a 309 Pfam PF01584 CheW-like domain 21 155 2.1E-34 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_13520 364480ab4e6abd806b8161f5e1e1e37a 309 SMART SM00260 17 153 6.5E-23 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_13520 364480ab4e6abd806b8161f5e1e1e37a 309 SMART SM00448 179 300 1.0E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_13520 364480ab4e6abd806b8161f5e1e1e37a 309 PIRSF PIRSF002867 1 307 1.3E-106 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV ambt_13520 364480ab4e6abd806b8161f5e1e1e37a 309 SUPERFAMILY SSF52172 178 304 2.7E-25 T 13-10-2018 IPR011006 CheY-like superfamily ambt_13520 364480ab4e6abd806b8161f5e1e1e37a 309 Gene3D G3DSA:2.30.30.40 24 147 1.1E-27 T 13-10-2018 ambt_13520 364480ab4e6abd806b8161f5e1e1e37a 309 SUPERFAMILY SSF50341 16 157 1.96E-35 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 485 7.1E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 466 7.1E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 429 7.1E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 443 7.1E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 Pfam PF00512 His Kinase A (phospho-acceptor) domain 256 319 4.0E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 SUPERFAMILY SSF47384 239 320 9.42E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 486 1.5E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 Pfam PF05227 CHASE3 domain 47 171 1.6E-21 T 13-10-2018 IPR007891 CHASE3 ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 SMART SM00388 254 322 1.3E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 Gene3D G3DSA:3.30.565.10 324 489 1.6E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 SMART SM00387 363 488 2.3E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 SUPERFAMILY SSF55874 312 486 1.31E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 Gene3D G3DSA:1.10.287.130 218 320 2.9E-14 T 13-10-2018 ambt_05960 3b5b367a84fc1c9f797a9aa532c64671 504 Gene3D G3DSA:1.20.1440.210 47 174 1.8E-24 T 13-10-2018 ambt_19900 1dfb95a6a81de0ff9f2392a801d8c65d 363 Gene3D G3DSA:3.20.20.210 11 363 3.4E-158 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ambt_19900 1dfb95a6a81de0ff9f2392a801d8c65d 363 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 31 40 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ambt_19900 1dfb95a6a81de0ff9f2392a801d8c65d 363 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 15 358 50.37 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ambt_19900 1dfb95a6a81de0ff9f2392a801d8c65d 363 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 151 167 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ambt_19900 1dfb95a6a81de0ff9f2392a801d8c65d 363 SUPERFAMILY SSF51726 12 362 3.92E-123 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ambt_19900 1dfb95a6a81de0ff9f2392a801d8c65d 363 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 18 356 2.6E-137 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ambt_19900 1dfb95a6a81de0ff9f2392a801d8c65d 363 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 14 356 6.1E-142 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ambt_13185 0d5042dabe32356e3740cb624134e776 376 SUPERFAMILY SSF52172 3 109 7.83E-26 T 13-10-2018 IPR011006 CheY-like superfamily ambt_13185 0d5042dabe32356e3740cb624134e776 376 Pfam PF01339 CheB methylesterase 191 371 1.2E-58 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ambt_13185 0d5042dabe32356e3740cb624134e776 376 PIRSF PIRSF000876 1 376 2.0E-123 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ambt_13185 0d5042dabe32356e3740cb624134e776 376 Pfam PF00072 Response regulator receiver domain 5 109 2.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_13185 0d5042dabe32356e3740cb624134e776 376 Gene3D G3DSA:3.40.50.2300 3 130 1.0E-30 T 13-10-2018 ambt_13185 0d5042dabe32356e3740cb624134e776 376 SMART SM00448 3 126 1.9E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_13185 0d5042dabe32356e3740cb624134e776 376 Gene3D G3DSA:3.40.50.180 180 376 6.0E-63 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal ambt_13185 0d5042dabe32356e3740cb624134e776 376 SUPERFAMILY SSF52738 185 373 4.97E-61 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal ambt_13185 0d5042dabe32356e3740cb624134e776 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 376 37.51 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ambt_01255 36df0982733ed8fda89b53bb25d3ac85 233 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 186 1.2E-6 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_01255 36df0982733ed8fda89b53bb25d3ac85 233 Gene3D G3DSA:1.10.150.240 28 94 2.0E-48 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ambt_01255 36df0982733ed8fda89b53bb25d3ac85 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 191 1.8E-18 T 13-10-2018 ambt_01255 36df0982733ed8fda89b53bb25d3ac85 233 Gene3D G3DSA:3.40.50.1000 16 200 2.0E-48 T 13-10-2018 IPR023214 HAD superfamily ambt_01255 36df0982733ed8fda89b53bb25d3ac85 233 SUPERFAMILY SSF56784 13 199 5.46E-44 T 13-10-2018 IPR036412 HAD-like superfamily ambt_01255 36df0982733ed8fda89b53bb25d3ac85 233 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 86 191 1.5E-17 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 SMART SM00267 817 987 1.1E-45 T 13-10-2018 IPR000160 GGDEF domain ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 Pfam PF00990 Diguanylate cyclase, GGDEF domain 829 983 1.2E-45 T 13-10-2018 IPR000160 GGDEF domain ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 Pfam PF07494 Two component regulator propeller 44 66 0.0038 T 13-10-2018 IPR011110 Two component regulator propeller ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 Gene3D G3DSA:2.130.10.10 35 342 1.8E-53 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 SUPERFAMILY SSF55073 833 986 4.79E-46 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 Gene3D G3DSA:2.60.40.10 650 776 5.2E-33 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 Gene3D G3DSA:2.130.10.10 518 649 1.3E-17 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 SUPERFAMILY SSF63829 116 335 1.83E-13 T 13-10-2018 ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 Gene3D G3DSA:2.130.10.10 343 493 9.6E-12 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 827 986 9.4E-49 T 13-10-2018 IPR000160 GGDEF domain ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 Pfam PF07495 Y_Y_Y domain 705 766 3.0E-15 T 13-10-2018 IPR011123 Two component regulator three Y ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 SUPERFAMILY SSF63829 409 614 8.5E-7 T 13-10-2018 ambt_09935 a4b6ae6354fc9fcd1e2ecf486cc689dd 987 Gene3D G3DSA:3.30.70.270 821 987 5.1E-53 T 13-10-2018 ambt_05615 f21899f2c0b147175f3a84767affbd3f 591 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 316 1.6E-43 T 13-10-2018 IPR000160 GGDEF domain ambt_05615 f21899f2c0b147175f3a84767affbd3f 591 SUPERFAMILY SSF141868 336 585 5.75E-85 T 13-10-2018 IPR035919 EAL domain superfamily ambt_05615 f21899f2c0b147175f3a84767affbd3f 591 SUPERFAMILY SSF55073 164 322 4.32E-43 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_05615 f21899f2c0b147175f3a84767affbd3f 591 Pfam PF00563 EAL domain 338 571 1.9E-72 T 13-10-2018 IPR001633 EAL domain ambt_05615 f21899f2c0b147175f3a84767affbd3f 591 Gene3D G3DSA:3.20.20.450 332 588 7.2E-93 T 13-10-2018 IPR035919 EAL domain superfamily ambt_05615 f21899f2c0b147175f3a84767affbd3f 591 Gene3D G3DSA:3.30.70.270 153 331 3.5E-52 T 13-10-2018 ambt_05615 f21899f2c0b147175f3a84767affbd3f 591 SMART SM00052 330 576 2.2E-102 T 13-10-2018 IPR001633 EAL domain ambt_05615 f21899f2c0b147175f3a84767affbd3f 591 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 318 4.4E-41 T 13-10-2018 IPR000160 GGDEF domain ambt_05615 f21899f2c0b147175f3a84767affbd3f 591 SMART SM00267 148 320 5.1E-55 T 13-10-2018 IPR000160 GGDEF domain ambt_08505 e240299f88628bbdd37b1b570a1e419c 95 SMART SM00411 1 91 8.7E-42 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_08505 e240299f88628bbdd37b1b570a1e419c 95 SUPERFAMILY SSF47729 1 91 3.09E-30 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ambt_08505 e240299f88628bbdd37b1b570a1e419c 95 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.7E-30 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_08505 e240299f88628bbdd37b1b570a1e419c 95 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 1.1E-47 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 ambt_08505 e240299f88628bbdd37b1b570a1e419c 95 Gene3D G3DSA:4.10.520.10 40 91 3.5E-27 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ambt_08505 e240299f88628bbdd37b1b570a1e419c 95 Gene3D G3DSA:4.10.520.10 2 39 4.6E-9 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ambt_08505 e240299f88628bbdd37b1b570a1e419c 95 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.6E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_08505 e240299f88628bbdd37b1b570a1e419c 95 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.6E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_08505 e240299f88628bbdd37b1b570a1e419c 95 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.6E-19 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_08505 e240299f88628bbdd37b1b570a1e419c 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ambt_08505 e240299f88628bbdd37b1b570a1e419c 95 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.925 T 13-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.7E-15 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 Gene3D G3DSA:2.40.30.10 338 393 6.0E-29 T 13-10-2018 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.7E-33 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 393 60.081 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 SUPERFAMILY SSF52540 9 226 3.3E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 SUPERFAMILY SSF50447 205 301 1.2E-30 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 3.5E-236 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 Gene3D G3DSA:3.40.50.300 1 203 1.8E-71 T 13-10-2018 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 Gene3D G3DSA:2.40.30.10 206 334 1.7E-54 T 13-10-2018 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.2E-58 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.8E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ambt_00205 d1ff68860857aad76b1a5d3acf887936 393 SUPERFAMILY SSF50465 298 392 1.78E-35 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 5.7E-15 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.9E-24 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 Gene3D G3DSA:2.40.30.10 338 393 6.0E-29 T 13-10-2018 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 1.7E-33 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 393 60.081 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 SUPERFAMILY SSF52540 9 226 3.3E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 SUPERFAMILY SSF50447 205 301 1.2E-30 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 3.5E-236 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 Gene3D G3DSA:3.40.50.300 1 203 1.8E-71 T 13-10-2018 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 Gene3D G3DSA:2.40.30.10 206 334 1.7E-54 T 13-10-2018 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.2E-58 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.8E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ambt_19610 d1ff68860857aad76b1a5d3acf887936 393 SUPERFAMILY SSF50465 298 392 1.78E-35 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ambt_20630 55b27467eaa85d7831452f74a0b03366 154 Hamap MF_00822 Urease accessory protein UreE [ureE]. 6 139 21.384 T 13-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 ambt_20630 55b27467eaa85d7831452f74a0b03366 154 SMART SM00988 1 65 1.1E-14 T 13-10-2018 IPR004029 UreE urease accessory, N-terminal ambt_20630 55b27467eaa85d7831452f74a0b03366 154 SUPERFAMILY SSF69287 1 67 4.84E-12 T 13-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily ambt_20630 55b27467eaa85d7831452f74a0b03366 154 Gene3D G3DSA:3.30.70.790 72 142 2.6E-27 T 13-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 ambt_20630 55b27467eaa85d7831452f74a0b03366 154 SUPERFAMILY SSF69737 72 138 2.62E-19 T 13-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 ambt_20630 55b27467eaa85d7831452f74a0b03366 154 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 154 4.6E-27 T 13-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 ambt_20630 55b27467eaa85d7831452f74a0b03366 154 Gene3D G3DSA:2.60.260.20 1 69 1.1E-16 T 13-10-2018 ambt_20630 55b27467eaa85d7831452f74a0b03366 154 PIRSF PIRSF036402 3 154 3.3E-35 T 13-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 ambt_20630 55b27467eaa85d7831452f74a0b03366 154 Pfam PF02814 UreE urease accessory protein, N-terminal domain 12 65 1.6E-10 T 13-10-2018 IPR004029 UreE urease accessory, N-terminal ambt_17075 798248647333baad23a772ac56dcdc12 359 Pfam PF08468 Methyltransferase small domain N-terminal 7 180 9.9E-31 T 13-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 ambt_17075 798248647333baad23a772ac56dcdc12 359 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 3 359 37.625 T 13-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 ambt_17075 798248647333baad23a772ac56dcdc12 359 Pfam PF05175 Methyltransferase small domain 192 357 2.1E-47 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ambt_17075 798248647333baad23a772ac56dcdc12 359 SUPERFAMILY SSF53335 179 336 4.22E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_17075 798248647333baad23a772ac56dcdc12 359 Gene3D G3DSA:3.40.50.150 179 359 5.4E-34 T 13-10-2018 ambt_17075 798248647333baad23a772ac56dcdc12 359 Gene3D G3DSA:3.40.50.150 1 175 1.6E-36 T 13-10-2018 ambt_03805 f17c90e4730e5acd0280dfef2540e7df 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 60 78 7.3E-16 T 13-10-2018 IPR003849 Preprotein translocase YajC ambt_03805 f17c90e4730e5acd0280dfef2540e7df 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 22 42 7.3E-16 T 13-10-2018 IPR003849 Preprotein translocase YajC ambt_03805 f17c90e4730e5acd0280dfef2540e7df 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 22 104 8.9E-30 T 13-10-2018 IPR003849 Preprotein translocase YajC ambt_03805 f17c90e4730e5acd0280dfef2540e7df 112 SMART SM01323 20 104 1.8E-38 T 13-10-2018 IPR003849 Preprotein translocase YajC ambt_03805 f17c90e4730e5acd0280dfef2540e7df 112 Pfam PF02699 Preprotein translocase subunit 24 101 1.0E-25 T 13-10-2018 IPR003849 Preprotein translocase YajC ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 Gene3D G3DSA:3.30.230.40 164 255 3.5E-36 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 168 356 36.254 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 Pfam PF13242 HAD-hyrolase-like 104 146 1.4E-5 T 13-10-2018 ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 SUPERFAMILY SSF54211 253 343 5.56E-28 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 SUPERFAMILY SSF56784 3 159 2.85E-39 T 13-10-2018 IPR036412 HAD-like superfamily ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 227 240 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 Gene3D G3DSA:3.30.230.40 256 356 5.7E-33 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 3 356 50.094 T 13-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 197 338 2.5E-63 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 149 8.5E-25 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 SUPERFAMILY SSF54211 168 252 1.07E-31 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 145 4.5E-46 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 4 163 8.6E-80 T 13-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 ambt_04660 2e40a6a82a2284ca60f81256a71d4f5f 356 Gene3D G3DSA:3.40.50.1000 1 163 4.3E-45 T 13-10-2018 IPR023214 HAD superfamily ambt_17650 dbce7a93e7755be51513f4d2675d24e3 348 SUPERFAMILY SSF111369 47 270 1.05E-23 T 13-10-2018 ambt_17650 dbce7a93e7755be51513f4d2675d24e3 348 Gene3D G3DSA:2.40.50.100 57 203 8.2E-55 T 13-10-2018 ambt_17650 dbce7a93e7755be51513f4d2675d24e3 348 Gene3D G3DSA:2.40.30.170 43 271 8.2E-55 T 13-10-2018 ambt_17650 dbce7a93e7755be51513f4d2675d24e3 348 Gene3D G3DSA:2.40.420.20 36 343 8.2E-55 T 13-10-2018 ambt_17650 dbce7a93e7755be51513f4d2675d24e3 348 Pfam PF13437 HlyD family secretion protein 169 255 1.0E-5 T 13-10-2018 ambt_17650 dbce7a93e7755be51513f4d2675d24e3 348 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 345 1.1E-59 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_17650 dbce7a93e7755be51513f4d2675d24e3 348 Pfam PF13533 Biotin-lipoyl like 59 105 1.7E-12 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ambt_17650 dbce7a93e7755be51513f4d2675d24e3 348 Gene3D G3DSA:1.10.287.470 91 163 8.2E-55 T 13-10-2018 ambt_13975 2ed8e54e300cfc5466d9f3d1c4691538 543 SUPERFAMILY SSF52540 1 268 6.64E-120 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13975 2ed8e54e300cfc5466d9f3d1c4691538 543 Pfam PF06418 CTP synthase N-terminus 4 265 1.6E-123 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ambt_13975 2ed8e54e300cfc5466d9f3d1c4691538 543 Gene3D G3DSA:3.40.50.300 1 284 3.4E-131 T 13-10-2018 ambt_13975 2ed8e54e300cfc5466d9f3d1c4691538 543 Gene3D G3DSA:3.40.50.880 285 543 5.7E-105 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_13975 2ed8e54e300cfc5466d9f3d1c4691538 543 Pfam PF00117 Glutamine amidotransferase class-I 300 533 2.1E-60 T 13-10-2018 IPR017926 Glutamine amidotransferase ambt_13975 2ed8e54e300cfc5466d9f3d1c4691538 543 Hamap MF_01227 CTP synthase [pyrG]. 2 539 51.207 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ambt_13975 2ed8e54e300cfc5466d9f3d1c4691538 543 TIGRFAM TIGR00337 PyrG: CTP synthase 2 534 2.0E-257 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ambt_13975 2ed8e54e300cfc5466d9f3d1c4691538 543 SUPERFAMILY SSF52317 288 541 2.22E-88 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 Gene3D G3DSA:3.40.50.170 88 284 5.0E-68 T 13-10-2018 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 283 45.012 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 SUPERFAMILY SSF53328 89 283 5.89E-56 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 Pfam PF00551 Formyl transferase 89 262 5.6E-36 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 SUPERFAMILY SSF55021 4 85 1.46E-14 T 13-10-2018 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 283 3.8E-102 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 5.1E-55 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 5.1E-55 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 5.1E-55 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 5.1E-55 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 5.1E-55 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 5.1E-55 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 Pfam PF01842 ACT domain 6 57 1.3E-6 T 13-10-2018 IPR002912 ACT domain ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 Gene3D G3DSA:3.30.70.260 1 87 4.7E-25 T 13-10-2018 ambt_16445 43793b468deb5dbe6a9e646475e5f1d3 284 PIRSF PIRSF036480 2 284 1.7E-108 T 13-10-2018 ambt_21360 8acc1d5f317132d4656ee843a457ae28 520 Gene3D G3DSA:3.90.228.20 208 507 1.3E-202 T 13-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ambt_21360 8acc1d5f317132d4656ee843a457ae28 520 Gene3D G3DSA:2.170.8.10 34 323 1.3E-202 T 13-10-2018 ambt_21360 8acc1d5f317132d4656ee843a457ae28 520 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 19 518 2.3E-187 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ambt_21360 8acc1d5f317132d4656ee843a457ae28 520 Pfam PF01293 Phosphoenolpyruvate carboxykinase 18 474 4.9E-195 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ambt_21360 8acc1d5f317132d4656ee843a457ae28 520 PIRSF PIRSF006294 3 520 5.5E-214 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ambt_21360 8acc1d5f317132d4656ee843a457ae28 520 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 244 259 - T 13-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ambt_21360 8acc1d5f317132d4656ee843a457ae28 520 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 8 520 51.395 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ambt_21360 8acc1d5f317132d4656ee843a457ae28 520 Gene3D G3DSA:3.40.449.10 24 207 1.3E-202 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ambt_21360 8acc1d5f317132d4656ee843a457ae28 520 SUPERFAMILY SSF53795 207 518 3.48E-127 T 13-10-2018 ambt_21360 8acc1d5f317132d4656ee843a457ae28 520 SUPERFAMILY SSF68923 17 206 7.67E-71 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ambt_10170 bf51b64dad28cf33b337a8a05b88e004 325 Gene3D G3DSA:3.90.180.10 14 323 2.2E-99 T 13-10-2018 ambt_10170 bf51b64dad28cf33b337a8a05b88e004 325 SUPERFAMILY SSF50129 1 139 9.91E-35 T 13-10-2018 IPR011032 GroES-like superfamily ambt_10170 bf51b64dad28cf33b337a8a05b88e004 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 86 3.1E-9 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ambt_10170 bf51b64dad28cf33b337a8a05b88e004 325 SMART SM00829 10 323 5.8E-35 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ambt_10170 bf51b64dad28cf33b337a8a05b88e004 325 Gene3D G3DSA:3.40.50.720 120 262 2.2E-99 T 13-10-2018 ambt_10170 bf51b64dad28cf33b337a8a05b88e004 325 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 324 2.3E-115 T 13-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 ambt_10170 bf51b64dad28cf33b337a8a05b88e004 325 SUPERFAMILY SSF51735 111 285 1.66E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_10170 bf51b64dad28cf33b337a8a05b88e004 325 Pfam PF00107 Zinc-binding dehydrogenase 151 274 1.1E-21 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ambt_11710 57ea46796fc9650ccce08711034aff21 298 Gene3D G3DSA:3.40.50.720 2 297 3.3E-69 T 13-10-2018 ambt_11710 57ea46796fc9650ccce08711034aff21 298 SUPERFAMILY SSF51735 1 294 4.3E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_11710 57ea46796fc9650ccce08711034aff21 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 213 2.6E-15 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ambt_11710 57ea46796fc9650ccce08711034aff21 298 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 1.7E-18 T 13-10-2018 IPR013549 Domain of unknown function DUF1731 ambt_11710 57ea46796fc9650ccce08711034aff21 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 1.7E-104 T 13-10-2018 IPR010099 Epimerase family protein SDR39U1 ambt_18875 d1b394a8a31cfc2d1afae52f044f0263 359 Gene3D G3DSA:3.40.50.720 4 330 3.3E-135 T 13-10-2018 ambt_18875 d1b394a8a31cfc2d1afae52f044f0263 359 Gene3D G3DSA:3.90.25.10 210 339 3.3E-135 T 13-10-2018 ambt_18875 d1b394a8a31cfc2d1afae52f044f0263 359 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 331 2.1E-96 T 13-10-2018 IPR016040 NAD(P)-binding domain ambt_18875 d1b394a8a31cfc2d1afae52f044f0263 359 SUPERFAMILY SSF51735 1 343 9.23E-96 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_18875 d1b394a8a31cfc2d1afae52f044f0263 359 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 345 1.0E-152 T 13-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 ambt_10855 3c1b230edef9e08a79b6cae29f088bae 106 SUPERFAMILY SSF49472 1 106 1.83E-32 T 13-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ambt_10855 3c1b230edef9e08a79b6cae29f088bae 106 Gene3D G3DSA:2.60.40.180 1 106 1.7E-32 T 13-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ambt_10855 3c1b230edef9e08a79b6cae29f088bae 106 ProSitePatterns PS00769 Transthyretin signature 2. 89 101 - T 13-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ambt_10855 3c1b230edef9e08a79b6cae29f088bae 106 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 106 1.7E-32 T 13-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ambt_10855 3c1b230edef9e08a79b6cae29f088bae 106 Pfam PF00576 HIUase/Transthyretin family 4 105 4.2E-30 T 13-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ambt_10855 3c1b230edef9e08a79b6cae29f088bae 106 PRINTS PR00189 Transthyretin signature 84 106 2.6E-5 T 13-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ambt_10855 3c1b230edef9e08a79b6cae29f088bae 106 PRINTS PR00189 Transthyretin signature 3 23 2.6E-5 T 13-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ambt_21995 77d830046f0ee02a7483e6a38ede9802 378 Gene3D G3DSA:3.90.220.20 2 186 2.4E-17 T 13-10-2018 ambt_21995 77d830046f0ee02a7483e6a38ede9802 378 Gene3D G3DSA:3.90.220.20 187 377 8.1E-20 T 13-10-2018 ambt_21995 77d830046f0ee02a7483e6a38ede9802 378 SUPERFAMILY SSF116734 206 377 2.62E-15 T 13-10-2018 ambt_21995 77d830046f0ee02a7483e6a38ede9802 378 SUPERFAMILY SSF116734 19 182 1.29E-13 T 13-10-2018 ambt_13335 863c3f0eaae3ffaf2d7632ec81b6baa4 374 TIGRFAM TIGR03590 PseG: UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase 3 294 1.5E-84 T 13-10-2018 IPR020023 UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase ambt_13335 863c3f0eaae3ffaf2d7632ec81b6baa4 374 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 309 1.9E-4 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 ambt_13335 863c3f0eaae3ffaf2d7632ec81b6baa4 374 Gene3D G3DSA:3.40.50.11190 2 154 1.6E-42 T 13-10-2018 ambt_13335 863c3f0eaae3ffaf2d7632ec81b6baa4 374 Gene3D G3DSA:3.40.50.2000 155 308 1.4E-38 T 13-10-2018 ambt_13335 863c3f0eaae3ffaf2d7632ec81b6baa4 374 SUPERFAMILY SSF53756 15 355 3.01E-11 T 13-10-2018 ambt_05435 27ef0c71c5e5fdeb4ff01bf4898f0b46 226 SUPERFAMILY SSF52540 74 218 4.07E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_05435 27ef0c71c5e5fdeb4ff01bf4898f0b46 226 Gene3D G3DSA:3.40.50.300 41 223 1.3E-42 T 13-10-2018 ambt_05435 27ef0c71c5e5fdeb4ff01bf4898f0b46 226 Pfam PF01695 IstB-like ATP binding protein 33 209 1.2E-55 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ambt_05435 27ef0c71c5e5fdeb4ff01bf4898f0b46 226 SMART SM00382 77 210 2.7E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_05435 27ef0c71c5e5fdeb4ff01bf4898f0b46 226 Pfam PF08483 IstB-like ATP binding N-terminal 3 31 3.1E-12 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal ambt_05435 27ef0c71c5e5fdeb4ff01bf4898f0b46 226 PIRSF PIRSF003073 1 226 5.8E-59 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ambt_09230 01a69d20507ee0c50ce85ffd45d72054 358 SUPERFAMILY SSF111369 63 281 1.44E-38 T 13-10-2018 ambt_09230 01a69d20507ee0c50ce85ffd45d72054 358 Gene3D G3DSA:2.40.30.170 61 285 1.5E-68 T 13-10-2018 ambt_09230 01a69d20507ee0c50ce85ffd45d72054 358 Gene3D G3DSA:2.40.50.100 72 202 1.5E-68 T 13-10-2018 ambt_09230 01a69d20507ee0c50ce85ffd45d72054 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 355 7.6E-70 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_09230 01a69d20507ee0c50ce85ffd45d72054 358 Gene3D G3DSA:1.10.287.470 107 166 1.5E-68 T 13-10-2018 ambt_09230 01a69d20507ee0c50ce85ffd45d72054 358 Gene3D G3DSA:2.40.420.20 286 353 1.5E-68 T 13-10-2018 ambt_09230 01a69d20507ee0c50ce85ffd45d72054 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 69 274 6.8E-24 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_11300 2f51342114fcfe174f635a74269184a2 295 SUPERFAMILY SSF53448 2 216 2.91E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_11300 2f51342114fcfe174f635a74269184a2 295 Gene3D G3DSA:3.90.550.10 1 200 4.1E-24 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_11300 2f51342114fcfe174f635a74269184a2 295 Pfam PF00535 Glycosyl transferase family 2 2 124 7.1E-12 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_15180 fef53629b5738d5852035917ed1cd889 849 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 10 799 0.0 T 13-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 ambt_15180 fef53629b5738d5852035917ed1cd889 849 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 559 619 2.1E-11 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_15180 fef53629b5738d5852035917ed1cd889 849 SUPERFAMILY SSF56014 632 807 3.66E-50 T 13-10-2018 ambt_15180 fef53629b5738d5852035917ed1cd889 849 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 678 694 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_15180 fef53629b5738d5852035917ed1cd889 849 SUPERFAMILY SSF51905 6 191 1.73E-44 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_15180 fef53629b5738d5852035917ed1cd889 849 Gene3D G3DSA:3.50.50.60 112 247 3.9E-82 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_15180 fef53629b5738d5852035917ed1cd889 849 SUPERFAMILY SSF55124 501 640 2.78E-26 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_15180 fef53629b5738d5852035917ed1cd889 849 Gene3D G3DSA:3.50.50.60 12 284 3.9E-82 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_15180 fef53629b5738d5852035917ed1cd889 849 SUPERFAMILY SSF51905 151 310 2.71E-26 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_15180 fef53629b5738d5852035917ed1cd889 849 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 288 2.9E-48 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ambt_15180 fef53629b5738d5852035917ed1cd889 849 Pfam PF04324 BFD-like [2Fe-2S] binding domain 422 470 2.8E-8 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ambt_15180 fef53629b5738d5852035917ed1cd889 849 Pfam PF04324 BFD-like [2Fe-2S] binding domain 484 532 1.1E-4 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ambt_15180 fef53629b5738d5852035917ed1cd889 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 107 116 3.9E-9 T 13-10-2018 ambt_15180 fef53629b5738d5852035917ed1cd889 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 3.9E-9 T 13-10-2018 ambt_15180 fef53629b5738d5852035917ed1cd889 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 3.9E-9 T 13-10-2018 ambt_15180 fef53629b5738d5852035917ed1cd889 849 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 3.9E-9 T 13-10-2018 ambt_15180 fef53629b5738d5852035917ed1cd889 849 PRINTS PR00397 Sirohaem Fe-binding site signature 678 696 6.5E-7 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_15180 fef53629b5738d5852035917ed1cd889 849 PRINTS PR00397 Sirohaem Fe-binding site signature 635 653 6.5E-7 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_15180 fef53629b5738d5852035917ed1cd889 849 Gene3D G3DSA:3.30.413.10 631 823 2.2E-33 T 13-10-2018 ambt_15180 fef53629b5738d5852035917ed1cd889 849 PIRSF PIRSF037149 1 834 0.0 T 13-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 ambt_15180 fef53629b5738d5852035917ed1cd889 849 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 632 756 9.8E-19 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_15180 fef53629b5738d5852035917ed1cd889 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 3.2E-17 T 13-10-2018 ambt_15180 fef53629b5738d5852035917ed1cd889 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 3.2E-17 T 13-10-2018 ambt_15180 fef53629b5738d5852035917ed1cd889 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 3.2E-17 T 13-10-2018 ambt_15180 fef53629b5738d5852035917ed1cd889 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 3.2E-17 T 13-10-2018 ambt_15180 fef53629b5738d5852035917ed1cd889 849 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 3.2E-17 T 13-10-2018 ambt_15180 fef53629b5738d5852035917ed1cd889 849 Gene3D G3DSA:1.10.10.1100 422 476 3.3E-11 T 13-10-2018 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 Gene3D G3DSA:3.40.50.1370 136 303 1.5E-102 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 7 315 4.3E-93 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 SUPERFAMILY SSF53671 2 317 2.62E-86 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.5E-47 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 4.3E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 4.3E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 297 311 4.3E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 4.3E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 4.3E-30 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.0E-19 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 281 304 1.0E-19 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 1.0E-19 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 1.0E-19 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 Gene3D G3DSA:3.40.50.1370 8 312 1.5E-102 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ambt_16300 14761b6f6c64ccabb2d92b4f51d58dab 343 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 314 1.0E-21 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ambt_15840 3b16ece02e19c0e25d43344d333964fa 378 Gene3D G3DSA:3.30.470.20 176 367 1.1E-73 T 13-10-2018 ambt_15840 3b16ece02e19c0e25d43344d333964fa 378 SUPERFAMILY SSF51246 299 370 1.57E-17 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ambt_15840 3b16ece02e19c0e25d43344d333964fa 378 Gene3D G3DSA:3.30.1490.20 97 174 2.1E-15 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ambt_15840 3b16ece02e19c0e25d43344d333964fa 378 SUPERFAMILY SSF56059 92 295 3.54E-56 T 13-10-2018 ambt_15840 3b16ece02e19c0e25d43344d333964fa 378 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 347 36.318 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ambt_15840 3b16ece02e19c0e25d43344d333964fa 378 Gene3D G3DSA:3.40.50.20 1 96 2.3E-16 T 13-10-2018 ambt_15840 3b16ece02e19c0e25d43344d333964fa 378 SUPERFAMILY SSF52440 1 87 2.59E-14 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ambt_15840 3b16ece02e19c0e25d43344d333964fa 378 Pfam PF02222 ATP-grasp domain 103 274 8.6E-49 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ambt_15840 3b16ece02e19c0e25d43344d333964fa 378 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 350 2.8E-104 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ambt_00150 4b33397a77c13f9cec2487f107c51ec0 285 Gene3D G3DSA:3.40.50.720 126 248 1.8E-71 T 13-10-2018 ambt_00150 4b33397a77c13f9cec2487f107c51ec0 285 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 13 282 6.8E-69 T 13-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ambt_00150 4b33397a77c13f9cec2487f107c51ec0 285 Gene3D G3DSA:3.40.50.10860 16 269 1.8E-71 T 13-10-2018 ambt_00150 4b33397a77c13f9cec2487f107c51ec0 285 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 11 281 28.362 T 13-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ambt_00150 4b33397a77c13f9cec2487f107c51ec0 285 SUPERFAMILY SSF51735 113 281 5.01E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_00150 4b33397a77c13f9cec2487f107c51ec0 285 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 127 202 5.3E-11 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ambt_00150 4b33397a77c13f9cec2487f107c51ec0 285 SUPERFAMILY SSF53223 8 112 9.21E-25 T 13-10-2018 ambt_00150 4b33397a77c13f9cec2487f107c51ec0 285 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 16 99 7.7E-20 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ambt_22050 d284ead76ad359e277d8b0120f8dde3f 449 Pfam PF13657 HipA N-terminal domain 21 120 3.7E-15 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 ambt_22050 d284ead76ad359e277d8b0120f8dde3f 449 Pfam PF07804 HipA-like C-terminal domain 178 414 1.2E-35 T 13-10-2018 IPR012893 HipA-like, C-terminal ambt_13375 9abd18cefafd92b28c00c7dc1c052071 381 Gene3D G3DSA:3.40.640.10 1 248 2.1E-72 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_13375 9abd18cefafd92b28c00c7dc1c052071 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 46 371 7.2E-91 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ambt_13375 9abd18cefafd92b28c00c7dc1c052071 381 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 3 375 5.4E-185 T 13-10-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 ambt_13375 9abd18cefafd92b28c00c7dc1c052071 381 SUPERFAMILY SSF53383 3 376 5.16E-96 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_13375 9abd18cefafd92b28c00c7dc1c052071 381 Gene3D G3DSA:3.90.1150.10 250 373 4.9E-27 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_13375 9abd18cefafd92b28c00c7dc1c052071 381 PIRSF PIRSF000390 1 379 1.3E-104 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 Gene3D G3DSA:3.30.300.20 202 280 8.5E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 SUPERFAMILY SSF54814 283 346 8.5E-15 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 345 3.0E-124 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 SUPERFAMILY SSF47794 357 419 1.27E-16 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 SUPERFAMILY SSF50249 135 202 1.65E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 Pfam PF00575 S1 RNA binding domain 135 197 1.2E-5 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 Gene3D G3DSA:1.10.150.20 356 424 1.3E-26 T 13-10-2018 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 368 417 4.7E-22 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 491 3.5E-14 T 13-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 Pfam PF08529 NusA N-terminal domain 4 126 9.5E-33 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 SUPERFAMILY SSF54814 203 281 2.62E-29 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 SMART SM00316 136 203 7.6E-10 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 Pfam PF13184 NusA-like KH domain 233 300 1.6E-26 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 SUPERFAMILY SSF47794 432 495 4.71E-15 T 13-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 Gene3D G3DSA:3.30.300.20 281 348 3.3E-23 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 Gene3D G3DSA:1.10.150.20 434 493 2.1E-19 T 13-10-2018 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 Gene3D G3DSA:3.30.1480.10 1 132 1.4E-39 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 Pfam PF14520 Helix-hairpin-helix domain 435 489 1.4E-6 T 13-10-2018 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 413 28.274 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 Gene3D G3DSA:2.40.50.140 138 201 4.7E-18 T 13-10-2018 ambt_06685 37ec3cb3123a800206d5d8a9cad95478 497 SUPERFAMILY SSF69705 1 128 6.93E-37 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 Pfam PF17191 RecG wedge domain 9 169 7.5E-22 T 13-10-2018 IPR033454 RecG, wedge domain ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 SUPERFAMILY SSF50249 6 171 1.2E-39 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 661 2.7E-231 T 13-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 Pfam PF00270 DEAD/DEAH box helicase 288 428 8.4E-19 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 SUPERFAMILY SSF52540 386 596 1.04E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 Pfam PF00271 Helicase conserved C-terminal domain 476 585 1.7E-17 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 Gene3D G3DSA:3.40.50.300 454 627 2.2E-50 T 13-10-2018 ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 Gene3D G3DSA:2.40.50.140 45 139 1.7E-11 T 13-10-2018 ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 SUPERFAMILY SSF52540 207 450 5.24E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 Gene3D G3DSA:3.40.50.300 206 447 8.7E-85 T 13-10-2018 ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 SMART SM00490 328 410 0.82 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 SMART SM00490 502 586 3.7E-21 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_18295 ba3af4e53de458cb3179748058c7e1ad 690 SMART SM00487 262 456 4.7E-31 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 Pfam PF00117 Glutamine amidotransferase class-I 13 201 3.0E-43 T 13-10-2018 IPR017926 Glutamine amidotransferase ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 11 201 4.3E-49 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 PRINTS PR00096 Glutamine amidotransferase superfamily signature 89 100 9.4E-14 T 13-10-2018 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 PRINTS PR00096 Glutamine amidotransferase superfamily signature 62 71 9.4E-14 T 13-10-2018 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 PRINTS PR00096 Glutamine amidotransferase superfamily signature 181 194 9.4E-14 T 13-10-2018 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 59 73 5.6E-5 T 13-10-2018 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 89 105 5.6E-5 T 13-10-2018 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 SUPERFAMILY SSF52317 11 204 3.48E-41 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 PRINTS PR00097 Anthranilate synthase component II signature 11 25 2.3E-34 T 13-10-2018 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 PRINTS PR00097 Anthranilate synthase component II signature 89 100 2.3E-34 T 13-10-2018 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 PRINTS PR00097 Anthranilate synthase component II signature 114 122 2.3E-34 T 13-10-2018 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 PRINTS PR00097 Anthranilate synthase component II signature 62 71 2.3E-34 T 13-10-2018 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 PRINTS PR00097 Anthranilate synthase component II signature 134 146 2.3E-34 T 13-10-2018 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 PRINTS PR00097 Anthranilate synthase component II signature 181 194 2.3E-34 T 13-10-2018 ambt_11650 07ee2cf857da29ea38a3ec3a2b6f8082 209 Gene3D G3DSA:3.40.50.880 10 206 1.2E-52 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_10840 15ae2dcce5d0ea18eb9d854dcd748b26 778 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 31 127 8.6E-19 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ambt_10840 15ae2dcce5d0ea18eb9d854dcd748b26 778 Gene3D G3DSA:3.30.365.10 152 405 9.6E-268 T 13-10-2018 ambt_10840 15ae2dcce5d0ea18eb9d854dcd748b26 778 Gene3D G3DSA:3.30.365.10 186 280 9.6E-268 T 13-10-2018 ambt_10840 15ae2dcce5d0ea18eb9d854dcd748b26 778 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 154 703 2.9E-193 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ambt_10840 15ae2dcce5d0ea18eb9d854dcd748b26 778 Gene3D G3DSA:3.30.365.10 457 605 9.6E-268 T 13-10-2018 ambt_10840 15ae2dcce5d0ea18eb9d854dcd748b26 778 SMART SM01008 31 136 2.3E-33 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ambt_10840 15ae2dcce5d0ea18eb9d854dcd748b26 778 SUPERFAMILY SSF54665 9 127 6.93E-33 T 13-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily ambt_10840 15ae2dcce5d0ea18eb9d854dcd748b26 778 Gene3D G3DSA:3.90.1170.50 16 138 9.6E-268 T 13-10-2018 ambt_10840 15ae2dcce5d0ea18eb9d854dcd748b26 778 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 17 774 0.0 T 13-10-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 ambt_10840 15ae2dcce5d0ea18eb9d854dcd748b26 778 SUPERFAMILY SSF56003 139 770 1.3E-190 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 ambt_10840 15ae2dcce5d0ea18eb9d854dcd748b26 778 Gene3D G3DSA:3.30.365.10 139 769 9.6E-268 T 13-10-2018 ambt_20705 ea3f18d0b045885c7b6f96fbfa096778 646 Pfam PF00563 EAL domain 397 626 2.9E-69 T 13-10-2018 IPR001633 EAL domain ambt_20705 ea3f18d0b045885c7b6f96fbfa096778 646 SMART SM00052 391 631 2.2E-99 T 13-10-2018 IPR001633 EAL domain ambt_20705 ea3f18d0b045885c7b6f96fbfa096778 646 Gene3D G3DSA:3.20.20.450 394 638 1.1E-91 T 13-10-2018 IPR035919 EAL domain superfamily ambt_20705 ea3f18d0b045885c7b6f96fbfa096778 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 220 377 1.0E-49 T 13-10-2018 IPR000160 GGDEF domain ambt_20705 ea3f18d0b045885c7b6f96fbfa096778 646 SUPERFAMILY SSF141868 397 633 4.32E-80 T 13-10-2018 IPR035919 EAL domain superfamily ambt_20705 ea3f18d0b045885c7b6f96fbfa096778 646 Gene3D G3DSA:3.30.70.270 215 393 7.3E-59 T 13-10-2018 ambt_20705 ea3f18d0b045885c7b6f96fbfa096778 646 SMART SM00267 209 381 5.1E-64 T 13-10-2018 IPR000160 GGDEF domain ambt_20705 ea3f18d0b045885c7b6f96fbfa096778 646 SUPERFAMILY SSF55073 225 382 8.04E-51 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_20705 ea3f18d0b045885c7b6f96fbfa096778 646 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 218 380 5.3E-48 T 13-10-2018 IPR000160 GGDEF domain ambt_09610 5cfa3d519fa140ff45c80022105c0132 621 Gene3D G3DSA:3.90.226.10 96 316 1.5E-157 T 13-10-2018 ambt_09610 5cfa3d519fa140ff45c80022105c0132 621 SUPERFAMILY SSF52096 319 533 3.4E-41 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_09610 5cfa3d519fa140ff45c80022105c0132 621 Gene3D G3DSA:3.40.1750.10 187 502 1.5E-157 T 13-10-2018 ambt_09610 5cfa3d519fa140ff45c80022105c0132 621 Pfam PF01343 Peptidase family S49 396 545 9.3E-48 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 ambt_09610 5cfa3d519fa140ff45c80022105c0132 621 Pfam PF01343 Peptidase family S49 139 290 4.7E-27 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 ambt_09610 5cfa3d519fa140ff45c80022105c0132 621 Gene3D G3DSA:3.90.226.10 319 544 1.5E-157 T 13-10-2018 ambt_09610 5cfa3d519fa140ff45c80022105c0132 621 PIRSF PIRSF001217 8 621 2.1E-205 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 ambt_09610 5cfa3d519fa140ff45c80022105c0132 621 SUPERFAMILY SSF52096 27 286 4.97E-24 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_09610 5cfa3d519fa140ff45c80022105c0132 621 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 334 543 1.7E-52 T 13-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 ambt_09610 5cfa3d519fa140ff45c80022105c0132 621 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 613 3.9E-178 T 13-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 ambt_00105 42064dc91872a497a4a977240decb802 169 PRINTS PR01576 Peptide deformylase signature 101 119 4.2E-37 T 13-10-2018 IPR023635 Peptide deformylase ambt_00105 42064dc91872a497a4a977240decb802 169 PRINTS PR01576 Peptide deformylase signature 89 100 4.2E-37 T 13-10-2018 IPR023635 Peptide deformylase ambt_00105 42064dc91872a497a4a977240decb802 169 PRINTS PR01576 Peptide deformylase signature 120 149 4.2E-37 T 13-10-2018 IPR023635 Peptide deformylase ambt_00105 42064dc91872a497a4a977240decb802 169 PRINTS PR01576 Peptide deformylase signature 33 62 4.2E-37 T 13-10-2018 IPR023635 Peptide deformylase ambt_00105 42064dc91872a497a4a977240decb802 169 PIRSF PIRSF004749 1 168 1.4E-56 T 13-10-2018 IPR023635 Peptide deformylase ambt_00105 42064dc91872a497a4a977240decb802 169 Pfam PF01327 Polypeptide deformylase 5 152 1.3E-51 T 13-10-2018 IPR023635 Peptide deformylase ambt_00105 42064dc91872a497a4a977240decb802 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.867 T 13-10-2018 IPR023635 Peptide deformylase ambt_00105 42064dc91872a497a4a977240decb802 169 Gene3D G3DSA:3.90.45.10 1 167 1.3E-64 T 13-10-2018 IPR036821 Peptide deformylase superfamily ambt_00105 42064dc91872a497a4a977240decb802 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 4.3E-58 T 13-10-2018 IPR023635 Peptide deformylase ambt_00105 42064dc91872a497a4a977240decb802 169 SUPERFAMILY SSF56420 2 164 1.31E-61 T 13-10-2018 IPR036821 Peptide deformylase superfamily ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 Gene3D G3DSA:1.20.1730.10 31 495 2.8E-17 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 SUPERFAMILY SSF52172 1018 1142 5.27E-24 T 13-10-2018 IPR011006 CheY-like superfamily ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 Pfam PF00072 Response regulator receiver domain 1022 1134 3.3E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 Gene3D G3DSA:3.30.565.10 848 1001 1.4E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 SUPERFAMILY SSF55874 839 1001 7.99E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 Gene3D G3DSA:1.10.287.130 745 847 1.2E-13 T 13-10-2018 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 SUPERFAMILY SSF47384 770 850 4.32E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 894 1000 3.4E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 SMART SM00388 784 849 5.9E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 SMART SM00387 893 1001 2.9E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 Pfam PF12860 PAS fold 616 729 1.6E-43 T 13-10-2018 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 Gene3D G3DSA:3.40.50.2300 1009 1149 3.8E-23 T 13-10-2018 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 SMART SM00448 1020 1134 2.0E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 SUPERFAMILY SSF55785 622 734 3.62E-7 T 13-10-2018 IPR035965 PAS domain superfamily ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 Gene3D G3DSA:3.30.450.20 599 731 6.6E-10 T 13-10-2018 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 PRINTS PR00344 Bacterial sensor protein C-terminal signature 985 998 6.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 PRINTS PR00344 Bacterial sensor protein C-terminal signature 961 979 6.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 943 6.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 PRINTS PR00344 Bacterial sensor protein C-terminal signature 947 957 6.9E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_00310 6bcdc00e19dabbc899e32fe35c2b7fa8 1150 Pfam PF00512 His Kinase A (phospho-acceptor) domain 784 849 1.9E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_12180 da82378058b46355879b4d32c38eb13b 550 Pfam PF13581 Histidine kinase-like ATPase domain 434 541 2.4E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_12180 da82378058b46355879b4d32c38eb13b 550 Gene3D G3DSA:3.40.50.2300 1 155 9.1E-37 T 13-10-2018 ambt_12180 da82378058b46355879b4d32c38eb13b 550 SUPERFAMILY SSF81606 175 374 1.1E-5 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_12180 da82378058b46355879b4d32c38eb13b 550 Pfam PF00072 Response regulator receiver domain 3 115 8.5E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12180 da82378058b46355879b4d32c38eb13b 550 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 189 376 2.8E-30 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_12180 da82378058b46355879b4d32c38eb13b 550 SMART SM00331 164 377 1.5E-4 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_12180 da82378058b46355879b4d32c38eb13b 550 SUPERFAMILY SSF55874 423 536 5.57E-6 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_12180 da82378058b46355879b4d32c38eb13b 550 Gene3D G3DSA:3.60.40.10 158 389 2.3E-34 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_12180 da82378058b46355879b4d32c38eb13b 550 SUPERFAMILY SSF52172 1 142 2.13E-39 T 13-10-2018 IPR011006 CheY-like superfamily ambt_12180 da82378058b46355879b4d32c38eb13b 550 Gene3D G3DSA:3.30.565.10 396 548 1.1E-7 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_12180 da82378058b46355879b4d32c38eb13b 550 SMART SM00448 1 115 3.2E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SUPERFAMILY SSF48452 136 433 3.35E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 Gene3D G3DSA:1.25.40.10 477 576 1.7E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 8 909 1.2E-94 T 13-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 Pfam PF13181 Tetratricopeptide repeat 129 159 0.036 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 Pfam PF14559 Tetratricopeptide repeat 859 912 3.0E-6 T 13-10-2018 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 Pfam PF14559 Tetratricopeptide repeat 205 272 5.4E-11 T 13-10-2018 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 Gene3D G3DSA:1.25.40.10 305 476 5.1E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 Pfam PF07721 Tetratricopeptide repeat 508 533 0.97 T 13-10-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SMART SM00028 474 507 190.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SMART SM00028 26 59 25.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SMART SM00028 815 847 8.4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SMART SM00028 161 194 460.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SMART SM00028 848 881 120.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SMART SM00028 229 262 310.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SMART SM00028 882 915 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SMART SM00028 508 541 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SMART SM00028 711 744 0.23 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SMART SM00028 127 160 39.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SMART SM00028 195 228 0.24 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SUPERFAMILY SSF48452 451 804 3.8E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SUPERFAMILY SSF48452 772 905 2.21E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 Gene3D G3DSA:1.25.40.10 577 748 1.9E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 Gene3D G3DSA:1.25.40.10 749 917 2.5E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 Gene3D G3DSA:1.25.40.10 122 302 2.0E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 Gene3D G3DSA:1.25.40.10 31 110 5.9E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02590 e9fba694e8c2ec71dbea6a06716187b0 928 SUPERFAMILY SSF48452 28 187 2.76E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_20455 fda8ea9ff0034b35fc7ef868dbc2e08d 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.9E-23 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family ambt_20455 fda8ea9ff0034b35fc7ef868dbc2e08d 253 Pfam PF01609 Transposase DDE domain 89 246 1.9E-16 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_06975 fda8ea9ff0034b35fc7ef868dbc2e08d 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.9E-23 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family ambt_06975 fda8ea9ff0034b35fc7ef868dbc2e08d 253 Pfam PF01609 Transposase DDE domain 89 246 1.9E-16 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_09415 fda8ea9ff0034b35fc7ef868dbc2e08d 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.9E-23 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family ambt_09415 fda8ea9ff0034b35fc7ef868dbc2e08d 253 Pfam PF01609 Transposase DDE domain 89 246 1.9E-16 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_09020 fda8ea9ff0034b35fc7ef868dbc2e08d 253 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 76 1.9E-23 T 13-10-2018 IPR025161 Putative transposase IS4/IS5 family ambt_09020 fda8ea9ff0034b35fc7ef868dbc2e08d 253 Pfam PF01609 Transposase DDE domain 89 246 1.9E-16 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_08915 da69340b4e5f2c097a9f6436fa0d869d 216 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 7 196 3.1E-73 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 ambt_08915 da69340b4e5f2c097a9f6436fa0d869d 216 Pfam PF00551 Formyl transferase 7 186 8.9E-61 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ambt_08915 da69340b4e5f2c097a9f6436fa0d869d 216 Gene3D G3DSA:3.40.50.170 6 216 6.5E-84 T 13-10-2018 ambt_08915 da69340b4e5f2c097a9f6436fa0d869d 216 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 7 192 30.375 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 ambt_08915 da69340b4e5f2c097a9f6436fa0d869d 216 SUPERFAMILY SSF53328 7 206 4.97E-68 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ambt_11405 2fb918e8c0724290f37585cf4b3780ba 370 SUPERFAMILY SSF54791 16 77 5.32E-5 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ambt_11405 2fb918e8c0724290f37585cf4b3780ba 370 Gene3D G3DSA:3.40.50.300 117 323 3.7E-74 T 13-10-2018 ambt_11405 2fb918e8c0724290f37585cf4b3780ba 370 SUPERFAMILY SSF52540 119 295 1.01E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_11405 2fb918e8c0724290f37585cf4b3780ba 370 Pfam PF02562 PhoH-like protein 120 323 4.1E-95 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 ambt_17210 558d3166d48fd7ad3d093d1f3890ab34 304 Gene3D G3DSA:3.40.50.300 29 186 3.5E-13 T 13-10-2018 ambt_17210 558d3166d48fd7ad3d093d1f3890ab34 304 SUPERFAMILY SSF52540 5 264 2.08E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_17210 558d3166d48fd7ad3d093d1f3890ab34 304 Pfam PF13401 AAA domain 41 171 7.0E-23 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13195 54b5a1d17efccda206c091e3612e7141 254 SUPERFAMILY SSF75708 43 253 2.48E-62 T 13-10-2018 ambt_13195 54b5a1d17efccda206c091e3612e7141 254 PIRSF PIRSF002884 20 254 6.3E-78 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 ambt_13195 54b5a1d17efccda206c091e3612e7141 254 Pfam PF04344 Chemotaxis phosphatase, CheZ 43 254 1.2E-74 T 13-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 ambt_13195 54b5a1d17efccda206c091e3612e7141 254 Gene3D G3DSA:1.10.287.500 62 196 9.2E-43 T 13-10-2018 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 SUPERFAMILY SSF52172 527 646 4.7E-30 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 158 278 6.4E-17 T 13-10-2018 IPR000014 PAS domain ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 Pfam PF01627 Hpt domain 693 767 3.5E-13 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 Gene3D G3DSA:1.10.287.970 6 92 3.3E-12 T 13-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 SUPERFAMILY SSF47384 273 351 2.55E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 Pfam PF08448 PAS fold 165 274 4.6E-17 T 13-10-2018 IPR013656 PAS fold-4 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 Pfam PF00512 His Kinase A (phospho-acceptor) domain 286 348 1.2E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 SMART SM00387 397 513 2.6E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 SMART SM00086 230 272 0.0013 T 13-10-2018 IPR001610 PAC motif ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 SMART SM00388 285 350 5.9E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 1.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 1.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 1.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 510 1.3E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 PIRSF PIRSF003182 8 784 7.4E-280 T 13-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 Gene3D G3DSA:3.40.50.2300 516 643 1.2E-31 T 13-10-2018 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 Gene3D G3DSA:3.30.565.10 352 515 3.9E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 512 4.7E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 Pfam PF00072 Response regulator receiver domain 530 639 4.7E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 SUPERFAMILY SSF55874 339 511 9.69E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 SUPERFAMILY SSF47226 669 780 1.57E-26 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 SMART SM00091 158 224 5.9E-7 T 13-10-2018 IPR000014 PAS domain ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 SUPERFAMILY SSF55785 144 270 1.66E-22 T 13-10-2018 IPR035965 PAS domain superfamily ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 SMART SM00448 528 640 3.6E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 Gene3D G3DSA:3.30.450.20 144 274 8.6E-23 T 13-10-2018 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 Gene3D G3DSA:1.20.120.160 665 783 2.0E-28 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_01695 b59d6064eaa86dc2e58fe54638b054a6 785 Gene3D G3DSA:1.10.287.130 275 351 1.3E-18 T 13-10-2018 ambt_08735 f77c96a8a16cd9a0d034d19efc98b963 233 SUPERFAMILY SSF52200 3 118 2.22E-6 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily ambt_08735 f77c96a8a16cd9a0d034d19efc98b963 233 Gene3D G3DSA:3.40.50.10140 1 125 1.9E-11 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 Gene3D G3DSA:3.10.20.30 3 62 4.0E-22 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 Gene3D G3DSA:3.30.930.10 223 531 7.3E-130 T 13-10-2018 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 Gene3D G3DSA:3.30.980.10 69 222 1.0E-63 T 13-10-2018 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 1.5E-241 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 Gene3D G3DSA:3.40.50.800 532 638 1.9E-31 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 SUPERFAMILY SSF81271 3 61 7.52E-16 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 7.1E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 7.1E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 7.1E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 7.1E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 7.1E-55 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 SUPERFAMILY SSF52954 530 633 8.16E-31 T 13-10-2018 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 SMART SM00863 170 219 1.0E-19 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 Gene3D G3DSA:3.30.54.20 130 187 1.0E-63 T 13-10-2018 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 SUPERFAMILY SSF55186 64 241 8.5E-65 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 Pfam PF02824 TGS domain 4 61 7.4E-12 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 Pfam PF03129 Anticodon binding domain 541 627 2.5E-22 T 13-10-2018 IPR004154 Anticodon-binding ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 528 1.9E-47 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.133 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 3.0E-14 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ambt_10700 a91ae7bafd89bcf18eb0b0476eed8b52 638 SUPERFAMILY SSF55681 243 525 1.37E-98 T 13-10-2018 ambt_03455 ac00b700f3ccebdca18a808f8873359a 345 Pfam PF13377 Periplasmic binding protein-like domain 204 323 1.2E-20 T 13-10-2018 ambt_03455 ac00b700f3ccebdca18a808f8873359a 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 50 4.4E-7 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_03455 ac00b700f3ccebdca18a808f8873359a 345 SMART SM00354 5 76 5.2E-10 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_03455 ac00b700f3ccebdca18a808f8873359a 345 Gene3D G3DSA:3.40.50.2300 61 323 3.1E-43 T 13-10-2018 ambt_03455 ac00b700f3ccebdca18a808f8873359a 345 Gene3D G3DSA:3.40.50.2300 161 307 3.1E-43 T 13-10-2018 ambt_03455 ac00b700f3ccebdca18a808f8873359a 345 SUPERFAMILY SSF47413 5 65 7.31E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_03455 ac00b700f3ccebdca18a808f8873359a 345 Gene3D G3DSA:1.10.260.40 1 60 3.0E-15 T 13-10-2018 ambt_03455 ac00b700f3ccebdca18a808f8873359a 345 SUPERFAMILY SSF53822 78 342 3.85E-36 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 215 319 1.0E-16 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 SUPERFAMILY SSF53738 214 320 2.35E-8 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 SUPERFAMILY SSF53738 25 240 6.12E-45 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 550 1.5E-261 T 13-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 SUPERFAMILY SSF53738 310 453 5.89E-31 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 Gene3D G3DSA:3.40.120.10 13 223 2.5E-70 T 13-10-2018 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 326 445 2.0E-26 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 184 9.6E-34 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 496 542 7.3E-7 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 Gene3D G3DSA:3.30.310.50 449 550 4.9E-34 T 13-10-2018 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 145 154 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 Gene3D G3DSA:3.40.120.10 324 447 1.2E-30 T 13-10-2018 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 Gene3D G3DSA:3.40.120.10 226 323 1.8E-41 T 13-10-2018 ambt_11070 8636a9b9bb197f6476f33c22c8f346d4 550 SUPERFAMILY SSF55957 439 549 9.16E-19 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ambt_07740 dfd309f4d098dc0f61ad5f0f2ef7a8fb 303 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 182 299 3.2E-33 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ambt_07740 dfd309f4d098dc0f61ad5f0f2ef7a8fb 303 SUPERFAMILY SSF48179 180 301 1.7E-38 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_07740 dfd309f4d098dc0f61ad5f0f2ef7a8fb 303 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 25 38 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 ambt_07740 dfd309f4d098dc0f61ad5f0f2ef7a8fb 303 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 22 176 1.2E-48 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ambt_07740 dfd309f4d098dc0f61ad5f0f2ef7a8fb 303 SUPERFAMILY SSF51735 21 180 3.95E-52 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_07740 dfd309f4d098dc0f61ad5f0f2ef7a8fb 303 PIRSF PIRSF000103 17 303 1.9E-68 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ambt_07740 dfd309f4d098dc0f61ad5f0f2ef7a8fb 303 Gene3D G3DSA:3.40.50.720 3 178 1.7E-49 T 13-10-2018 ambt_07740 dfd309f4d098dc0f61ad5f0f2ef7a8fb 303 Gene3D G3DSA:1.10.1040.10 179 303 1.8E-37 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 147 298 1.5E-44 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 Gene3D G3DSA:3.40.50.1370 4 130 2.5E-96 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 Gene3D G3DSA:3.40.50.1370 131 297 2.5E-96 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 301 4.5E-93 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 2.0E-19 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 128 139 2.0E-19 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 46 65 2.0E-19 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 2.0E-19 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 SUPERFAMILY SSF53671 2 302 1.15E-85 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 44 58 2.2E-19 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 117 131 2.2E-19 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 280 291 2.2E-19 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 PRINTS PR00102 Ornithine carbamoyltransferase signature 219 229 2.2E-19 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ambt_16085 9aa08b7c0a7385125129863cb4aad9d0 303 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 141 2.9E-40 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ambt_19205 72fd687d44594ac6598ed6cd0c0fa0d2 453 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 427 7.9E-151 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ambt_19205 72fd687d44594ac6598ed6cd0c0fa0d2 453 PIRSF PIRSF006446 1 452 5.0E-170 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 SUPERFAMILY SSF47384 656 738 1.28E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 Gene3D G3DSA:3.30.565.10 736 895 2.9E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 SMART SM00448 918 1029 1.1E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 Pfam PF00512 His Kinase A (phospho-acceptor) domain 671 737 1.8E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 784 893 1.4E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 Gene3D G3DSA:1.10.287.130 636 735 3.1E-24 T 13-10-2018 ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 Pfam PF00072 Response regulator receiver domain 920 1028 5.0E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 PRINTS PR00344 Bacterial sensor protein C-terminal signature 838 848 2.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 PRINTS PR00344 Bacterial sensor protein C-terminal signature 879 892 2.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 PRINTS PR00344 Bacterial sensor protein C-terminal signature 855 873 2.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 PRINTS PR00344 Bacterial sensor protein C-terminal signature 820 834 2.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 SUPERFAMILY SSF55874 727 891 5.24E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 SUPERFAMILY SSF52172 917 1067 2.28E-26 T 13-10-2018 IPR011006 CheY-like superfamily ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 SMART SM00388 671 737 3.3E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 Gene3D G3DSA:1.10.4160.10 23 494 4.0E-18 T 13-10-2018 IPR038271 Purine-cytosine permease superfamily ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 SMART SM00387 784 895 1.2E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_20685 7754da280f0c6b7e1392bdd2820d83fe 1121 Gene3D G3DSA:3.40.50.2300 909 1052 2.8E-24 T 13-10-2018 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 543 40.341 T 13-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 2.3E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 2.3E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 2.3E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 2.3E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 2.3E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 PRINTS PR01041 Methionyl-tRNA synthetase signature 382 393 2.3E-22 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 Pfam PF09334 tRNA synthetases class I (M) 7 394 5.6E-156 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 SUPERFAMILY SSF57770 141 175 8.63E-12 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 Gene3D G3DSA:2.20.28.20 141 175 5.6E-154 T 13-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 SUPERFAMILY SSF50249 569 674 7.1E-32 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_05225 dd56ff962c98df803b65ea647c60f398 675 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 533 3.6E-180 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 SUPERFAMILY SSF47323 388 544 2.24E-44 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 SUPERFAMILY SSF52374 4 385 2.14E-101 T 13-10-2018 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 558 675 3.9E-44 T 13-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 Pfam PF01588 Putative tRNA binding domain 580 672 2.5E-23 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 Gene3D G3DSA:2.40.50.140 564 675 4.5E-33 T 13-10-2018 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 Gene3D G3DSA:3.40.50.620 7 382 5.6E-154 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_05225 dd56ff962c98df803b65ea647c60f398 675 Gene3D G3DSA:1.10.730.10 387 524 2.7E-34 T 13-10-2018 ambt_05225 dd56ff962c98df803b65ea647c60f398 675 Pfam PF08264 Anticodon-binding domain of tRNA 414 500 2.8E-6 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ambt_05825 5e59df760db2c68da6b6d83c6375d04f 609 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ambt_05825 5e59df760db2c68da6b6d83c6375d04f 609 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ambt_05825 5e59df760db2c68da6b6d83c6375d04f 609 SUPERFAMILY SSF143975 1 418 1.11E-143 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ambt_05825 5e59df760db2c68da6b6d83c6375d04f 609 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 2 601 5.1E-302 T 13-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 ambt_05825 5e59df760db2c68da6b6d83c6375d04f 609 SUPERFAMILY SSF52016 419 603 1.65E-56 T 13-10-2018 ambt_05825 5e59df760db2c68da6b6d83c6375d04f 609 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 1 602 57.458 T 13-10-2018 ambt_05825 5e59df760db2c68da6b6d83c6375d04f 609 Pfam PF00920 Dehydratase family 65 598 1.8E-154 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ambt_05825 5e59df760db2c68da6b6d83c6375d04f 609 Gene3D G3DSA:3.50.30.80 419 569 6.7E-50 T 13-10-2018 ambt_18270 aa5d23cb22a7733cf6b69cb53ca8a325 506 Gene3D G3DSA:1.10.3720.10 262 497 1.4E-33 T 13-10-2018 IPR035906 MetI-like superfamily ambt_18270 aa5d23cb22a7733cf6b69cb53ca8a325 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 317 488 1.7E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ambt_18270 aa5d23cb22a7733cf6b69cb53ca8a325 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 238 8.5E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ambt_18270 aa5d23cb22a7733cf6b69cb53ca8a325 506 SUPERFAMILY SSF161098 5 243 4.02E-40 T 13-10-2018 IPR035906 MetI-like superfamily ambt_18270 aa5d23cb22a7733cf6b69cb53ca8a325 506 Gene3D G3DSA:1.10.3720.10 7 247 1.8E-46 T 13-10-2018 IPR035906 MetI-like superfamily ambt_18270 aa5d23cb22a7733cf6b69cb53ca8a325 506 SUPERFAMILY SSF161098 261 488 1.31E-34 T 13-10-2018 IPR035906 MetI-like superfamily ambt_17065 ca78f33b1a4370ce6284aaa0e6826415 234 SUPERFAMILY SSF53474 4 230 4.27E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_17065 ca78f33b1a4370ce6284aaa0e6826415 234 Gene3D G3DSA:3.40.50.1820 2 234 2.5E-30 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_17065 ca78f33b1a4370ce6284aaa0e6826415 234 Pfam PF00561 alpha/beta hydrolase fold 56 220 3.0E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_10770 dbb9cb3c358b1def76fec4cda75aba60 501 Pfam PF00962 Adenosine/AMP deaminase 253 456 3.5E-30 T 13-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 ambt_10770 dbb9cb3c358b1def76fec4cda75aba60 501 SUPERFAMILY SSF51556 53 494 1.33E-59 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 Pfam PF09295 ChAPs (Chs5p-Arf1p-binding proteins) 750 866 2.6E-4 T 13-10-2018 IPR015374 Chs5p-Arf1p binding ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 TIGRFAM TIGR02917 PEP_TPR_lipo: putative PEP-CTERM system TPR-repeat lipoprotein 16 903 6.4E-150 T 13-10-2018 IPR014266 PEP-CTERM system TPR-repeat lipoprotein, putative ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 Pfam PF14559 Tetratricopeptide repeat 319 375 9.3E-6 T 13-10-2018 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 Gene3D G3DSA:1.25.40.10 425 483 2.4E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 SUPERFAMILY SSF48452 261 397 1.45E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 SUPERFAMILY SSF48452 514 869 2.47E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 Pfam PF13414 TPR repeat 40 79 4.9E-7 T 13-10-2018 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 Gene3D G3DSA:1.25.40.10 484 597 2.2E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 SMART SM00028 811 844 0.0038 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 SMART SM00028 32 65 6.9 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 SMART SM00028 711 744 190.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 SMART SM00028 271 304 46.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 SMART SM00028 66 99 27.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 SMART SM00028 610 643 41.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 Pfam PF13432 Tetratricopeptide repeat 244 303 7.9E-4 T 13-10-2018 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 Pfam PF13432 Tetratricopeptide repeat 182 236 2.7E-4 T 13-10-2018 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 SUPERFAMILY SSF48452 48 497 6.96E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 Gene3D G3DSA:1.25.40.10 20 114 2.0E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 Gene3D G3DSA:1.25.40.10 598 913 4.7E-34 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_15325 13e73eba9402ee5073af9864d22d6b69 925 Gene3D G3DSA:1.25.40.10 130 424 3.5E-28 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_13270 83b46a93e58413ee207c99296c08df18 148 Pfam PF02050 Flagellar FliJ protein 19 140 4.0E-28 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 ambt_13270 83b46a93e58413ee207c99296c08df18 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 141 1.8E-22 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 ambt_01565 259924e986fc00d7572311b9c1146b5b 85 Pfam PF03776 Septum formation topological specificity factor MinE 16 83 4.3E-26 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 ambt_01565 259924e986fc00d7572311b9c1146b5b 85 SUPERFAMILY SSF55229 34 84 5.62E-16 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 ambt_01565 259924e986fc00d7572311b9c1146b5b 85 Gene3D G3DSA:3.30.1070.10 1 84 1.8E-29 T 13-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 ambt_01565 259924e986fc00d7572311b9c1146b5b 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 19.153 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 ambt_01565 259924e986fc00d7572311b9c1146b5b 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 3.2E-29 T 13-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 Gene3D G3DSA:3.40.50.2300 767 887 1.3E-40 T 13-10-2018 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 SMART SM00448 768 881 5.9E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 SUPERFAMILY SSF52172 769 886 6.12E-36 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 SMART SM01358 35 277 3.7E-12 T 13-10-2018 IPR032255 Helical bimodular sensor domain ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 SMART SM00388 391 456 5.5E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 Gene3D G3DSA:1.20.1480.50 263 360 7.5E-13 T 13-10-2018 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 SUPERFAMILY SSF55874 445 620 7.47E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 Gene3D G3DSA:3.30.565.10 455 624 4.0E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 SUPERFAMILY SSF158472 306 353 3.66E-6 T 13-10-2018 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 573 4.2E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 PRINTS PR00344 Bacterial sensor protein C-terminal signature 580 598 4.2E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 PRINTS PR00344 Bacterial sensor protein C-terminal signature 604 617 4.2E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 559 4.2E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 SMART SM00387 503 620 4.9E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 Pfam PF00512 His Kinase A (phospho-acceptor) domain 391 456 2.6E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 503 619 1.7E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 Gene3D G3DSA:1.10.287.130 361 454 2.2E-23 T 13-10-2018 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 SUPERFAMILY SSF47384 376 457 5.89E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_01430 d9df6cff7c1cfd2d0d2829cce3835112 887 Pfam PF00072 Response regulator receiver domain 770 881 3.7E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_07905 398f91b00c0e660d2874157f3173369c 218 SMART SM00882 6 202 8.4E-73 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ambt_07905 398f91b00c0e660d2874157f3173369c 218 Pfam PF01144 Coenzyme A transferase 7 201 5.7E-42 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ambt_07905 398f91b00c0e660d2874157f3173369c 218 Gene3D G3DSA:3.40.1080.10 1 214 1.8E-100 T 13-10-2018 ambt_07905 398f91b00c0e660d2874157f3173369c 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 208 1.7E-100 T 13-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 ambt_07905 398f91b00c0e660d2874157f3173369c 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 13-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 ambt_07905 398f91b00c0e660d2874157f3173369c 218 SUPERFAMILY SSF100950 5 217 1.91E-74 T 13-10-2018 IPR037171 NagB/RpiA transferase-like ambt_19430 64657469998ae52c8bb9741cba647b82 413 Pfam PF08668 HDOD domain 196 287 3.6E-11 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD ambt_19430 64657469998ae52c8bb9741cba647b82 413 SMART SM00052 5 193 0.0064 T 13-10-2018 IPR001633 EAL domain ambt_19430 64657469998ae52c8bb9741cba647b82 413 PIRSF PIRSF003180 1 402 6.3E-115 T 13-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing ambt_19430 64657469998ae52c8bb9741cba647b82 413 SUPERFAMILY SSF141868 5 188 1.26E-23 T 13-10-2018 IPR035919 EAL domain superfamily ambt_19430 64657469998ae52c8bb9741cba647b82 413 Pfam PF00563 EAL domain 70 188 1.1E-12 T 13-10-2018 IPR001633 EAL domain ambt_19430 64657469998ae52c8bb9741cba647b82 413 Gene3D G3DSA:3.20.20.450 56 191 5.7E-15 T 13-10-2018 IPR035919 EAL domain superfamily ambt_19430 64657469998ae52c8bb9741cba647b82 413 SUPERFAMILY SSF109604 179 397 9.42E-40 T 13-10-2018 ambt_19430 64657469998ae52c8bb9741cba647b82 413 Gene3D G3DSA:1.10.3210.10 192 359 1.9E-21 T 13-10-2018 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 222 676 2.6E-181 T 13-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 SUPERFAMILY SSF51230 242 334 7.07E-21 T 13-10-2018 IPR011053 Single hybrid motif ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 266 295 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 SUPERFAMILY SSF47005 364 408 8.76E-13 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 Gene3D G3DSA:2.40.50.100 4 80 3.9E-16 T 13-10-2018 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 Pfam PF00364 Biotin-requiring enzyme 6 75 7.8E-16 T 13-10-2018 IPR000089 Biotin/lipoyl attachment ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 Pfam PF00364 Biotin-requiring enzyme 125 196 4.5E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 Pfam PF00364 Biotin-requiring enzyme 244 315 9.7E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 SUPERFAMILY SSF51230 123 215 4.32E-21 T 13-10-2018 IPR011053 Single hybrid motif ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 SUPERFAMILY SSF52777 435 675 3.51E-79 T 13-10-2018 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 SUPERFAMILY SSF51230 3 95 1.83E-18 T 13-10-2018 IPR011053 Single hybrid motif ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 Gene3D G3DSA:4.10.320.10 369 413 1.5E-19 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 Pfam PF02817 e3 binding domain 370 404 7.9E-15 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 147 176 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 445 675 1.1E-75 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 Gene3D G3DSA:2.40.50.100 124 201 1.0E-18 T 13-10-2018 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 Gene3D G3DSA:2.40.50.100 243 320 8.4E-19 T 13-10-2018 ambt_02320 8631cbd4200550defc41e6f9763ca0e5 676 Gene3D G3DSA:3.30.559.10 429 676 2.2E-94 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ambt_11930 19c83b6c4dd42a0bb809a3bd1fc04b2c 134 SUPERFAMILY SSF54631 1 125 2.48E-27 T 13-10-2018 ambt_11930 19c83b6c4dd42a0bb809a3bd1fc04b2c 134 SMART SM00116 4 51 5.2E-11 T 13-10-2018 IPR000644 CBS domain ambt_11930 19c83b6c4dd42a0bb809a3bd1fc04b2c 134 SMART SM00116 78 126 1.9E-4 T 13-10-2018 IPR000644 CBS domain ambt_11930 19c83b6c4dd42a0bb809a3bd1fc04b2c 134 Pfam PF00571 CBS domain 1 49 2.2E-8 T 13-10-2018 IPR000644 CBS domain ambt_11930 19c83b6c4dd42a0bb809a3bd1fc04b2c 134 Pfam PF00571 CBS domain 72 125 8.4E-13 T 13-10-2018 IPR000644 CBS domain ambt_11930 19c83b6c4dd42a0bb809a3bd1fc04b2c 134 Gene3D G3DSA:3.10.580.10 1 126 5.8E-30 T 13-10-2018 ambt_21270 d87b1b20c6073d409bc965bb48beff11 589 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_21270 d87b1b20c6073d409bc965bb48beff11 589 Gene3D G3DSA:3.40.50.300 330 581 4.0E-82 T 13-10-2018 ambt_21270 d87b1b20c6073d409bc965bb48beff11 589 SMART SM00382 368 555 4.2E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_21270 d87b1b20c6073d409bc965bb48beff11 589 Pfam PF00005 ABC transporter 359 509 1.1E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_21270 d87b1b20c6073d409bc965bb48beff11 589 Pfam PF00664 ABC transporter transmembrane region 28 297 9.9E-44 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ambt_21270 d87b1b20c6073d409bc965bb48beff11 589 SUPERFAMILY SSF90123 15 327 6.67E-64 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_21270 d87b1b20c6073d409bc965bb48beff11 589 Gene3D G3DSA:1.20.1560.10 3 329 1.9E-71 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_21270 d87b1b20c6073d409bc965bb48beff11 589 SUPERFAMILY SSF52540 332 578 6.68E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02465 cb28888eeb0f17387a733d5094cd0657 129 SUPERFAMILY SSF51230 3 128 4.91E-47 T 13-10-2018 IPR011053 Single hybrid motif ambt_02465 cb28888eeb0f17387a733d5094cd0657 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ambt_02465 cb28888eeb0f17387a733d5094cd0657 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 128 2.9E-56 T 13-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 ambt_02465 cb28888eeb0f17387a733d5094cd0657 129 Gene3D G3DSA:2.40.50.100 2 129 3.0E-52 T 13-10-2018 ambt_02465 cb28888eeb0f17387a733d5094cd0657 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 41.605 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 ambt_02465 cb28888eeb0f17387a733d5094cd0657 129 Pfam PF01597 Glycine cleavage H-protein 8 128 1.2E-48 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate ambt_06655 f6fd05655178cd4dea55921f1cb18353 324 SUPERFAMILY SSF82689 184 283 2.09E-24 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ambt_06655 f6fd05655178cd4dea55921f1cb18353 324 Gene3D G3DSA:3.30.70.100 183 277 6.1E-22 T 13-10-2018 ambt_06655 f6fd05655178cd4dea55921f1cb18353 324 Pfam PF05552 Conserved TM helix 27 58 9.2E-7 T 13-10-2018 IPR008910 Conserved TM helix ambt_06655 f6fd05655178cd4dea55921f1cb18353 324 SUPERFAMILY SSF50182 116 181 1.54E-15 T 13-10-2018 IPR010920 LSM domain superfamily ambt_06655 f6fd05655178cd4dea55921f1cb18353 324 Gene3D G3DSA:2.30.30.60 131 180 5.5E-13 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ambt_06655 f6fd05655178cd4dea55921f1cb18353 324 Pfam PF00924 Mechanosensitive ion channel 71 271 1.0E-47 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ambt_06655 f6fd05655178cd4dea55921f1cb18353 324 SUPERFAMILY SSF82861 28 114 6.54E-13 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ambt_01070 d900735e0955826b7744897210873be8 162 Pfam PF13276 HTH-like domain 27 82 1.1E-12 T 13-10-2018 IPR025948 HTH-like domain ambt_01070 d900735e0955826b7744897210873be8 162 SUPERFAMILY SSF53098 100 161 4.55E-15 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_01070 d900735e0955826b7744897210873be8 162 Gene3D G3DSA:3.30.420.10 105 162 5.7E-7 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_01070 d900735e0955826b7744897210873be8 162 Pfam PF00665 Integrase core domain 108 162 2.1E-12 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_13955 0dca77a293481491fee340cd43052f39 266 SMART SM00382 46 229 1.0E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13955 0dca77a293481491fee340cd43052f39 266 SUPERFAMILY SSF52540 33 237 1.96E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13955 0dca77a293481491fee340cd43052f39 266 Gene3D G3DSA:3.40.50.300 16 258 3.3E-62 T 13-10-2018 ambt_13955 0dca77a293481491fee340cd43052f39 266 Pfam PF00005 ABC transporter 37 180 2.4E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_08590 b331195ed9c92ca716ff1a25a1bd39da 165 Pfam PF13673 Acetyltransferase (GNAT) domain 85 150 6.0E-9 T 13-10-2018 IPR000182 GNAT domain ambt_08590 b331195ed9c92ca716ff1a25a1bd39da 165 SUPERFAMILY SSF55729 25 145 4.22E-12 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_08590 b331195ed9c92ca716ff1a25a1bd39da 165 Gene3D G3DSA:3.40.630.30 2 159 3.2E-42 T 13-10-2018 ambt_15140 6a8e6771ada96e48ca12dec044b2950e 471 Pfam PF13379 NMT1-like family 46 325 1.8E-104 T 13-10-2018 ambt_15140 6a8e6771ada96e48ca12dec044b2950e 471 Gene3D G3DSA:3.40.190.10 137 454 4.4E-138 T 13-10-2018 ambt_15140 6a8e6771ada96e48ca12dec044b2950e 471 SUPERFAMILY SSF53850 48 312 3.58E-17 T 13-10-2018 ambt_15140 6a8e6771ada96e48ca12dec044b2950e 471 Gene3D G3DSA:3.40.190.10 52 449 4.4E-138 T 13-10-2018 ambt_01150 cbae31d1056959fca0ecb8fad8aeb6cd 387 Pfam PF04055 Radical SAM superfamily 29 182 5.4E-25 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_01150 cbae31d1056959fca0ecb8fad8aeb6cd 387 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 383 164.827 T 13-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 ambt_01150 cbae31d1056959fca0ecb8fad8aeb6cd 387 Pfam PF13186 Iron-sulfur cluster-binding domain 252 317 6.0E-8 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain ambt_01150 cbae31d1056959fca0ecb8fad8aeb6cd 387 PIRSF PIRSF037420 6 364 1.6E-120 T 13-10-2018 IPR017200 Coenzyme PQQ synthesis protein E ambt_01150 cbae31d1056959fca0ecb8fad8aeb6cd 387 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 252 344 2.7E-8 T 13-10-2018 IPR023885 4Fe4S-binding SPASM domain ambt_01150 cbae31d1056959fca0ecb8fad8aeb6cd 387 Pfam PF13353 4Fe-4S single cluster domain 29 106 1.0E-7 T 13-10-2018 ambt_01150 cbae31d1056959fca0ecb8fad8aeb6cd 387 SMART SM00729 22 229 3.4E-4 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ambt_01150 cbae31d1056959fca0ecb8fad8aeb6cd 387 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 17 371 5.0E-165 T 13-10-2018 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 ambt_01150 cbae31d1056959fca0ecb8fad8aeb6cd 387 Gene3D G3DSA:3.20.20.70 20 303 1.0E-51 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_01150 cbae31d1056959fca0ecb8fad8aeb6cd 387 SUPERFAMILY SSF102114 19 326 1.83E-75 T 13-10-2018 ambt_00685 9e0f4dcdfb936e110d28791f7f225bf1 701 Pfam PF00563 EAL domain 456 690 9.9E-73 T 13-10-2018 IPR001633 EAL domain ambt_00685 9e0f4dcdfb936e110d28791f7f225bf1 701 Pfam PF00990 Diguanylate cyclase, GGDEF domain 283 435 4.0E-31 T 13-10-2018 IPR000160 GGDEF domain ambt_00685 9e0f4dcdfb936e110d28791f7f225bf1 701 SUPERFAMILY SSF141868 455 700 3.27E-87 T 13-10-2018 IPR035919 EAL domain superfamily ambt_00685 9e0f4dcdfb936e110d28791f7f225bf1 701 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 281 437 2.3E-25 T 13-10-2018 IPR000160 GGDEF domain ambt_00685 9e0f4dcdfb936e110d28791f7f225bf1 701 SMART SM00267 270 440 4.1E-28 T 13-10-2018 IPR000160 GGDEF domain ambt_00685 9e0f4dcdfb936e110d28791f7f225bf1 701 Gene3D G3DSA:3.20.20.450 454 700 3.0E-93 T 13-10-2018 IPR035919 EAL domain superfamily ambt_00685 9e0f4dcdfb936e110d28791f7f225bf1 701 SUPERFAMILY SSF55073 286 441 1.41E-31 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_00685 9e0f4dcdfb936e110d28791f7f225bf1 701 SUPERFAMILY SSF55785 171 275 7.18E-6 T 13-10-2018 IPR035965 PAS domain superfamily ambt_00685 9e0f4dcdfb936e110d28791f7f225bf1 701 Gene3D G3DSA:3.30.70.270 279 453 1.1E-35 T 13-10-2018 ambt_00685 9e0f4dcdfb936e110d28791f7f225bf1 701 Gene3D G3DSA:3.30.450.20 160 272 3.5E-6 T 13-10-2018 ambt_00685 9e0f4dcdfb936e110d28791f7f225bf1 701 SMART SM00052 450 695 1.8E-104 T 13-10-2018 IPR001633 EAL domain ambt_11980 94de8362b4b7ae3befb34bb03c443bdf 351 SUPERFAMILY SSF51735 11 138 1.9E-13 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_11980 94de8362b4b7ae3befb34bb03c443bdf 351 Gene3D G3DSA:3.40.50.720 11 190 2.9E-36 T 13-10-2018 ambt_11980 94de8362b4b7ae3befb34bb03c443bdf 351 Pfam PF02558 Ketopantoate reductase PanE/ApbA 12 167 8.0E-32 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain ambt_11980 94de8362b4b7ae3befb34bb03c443bdf 351 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 11 331 1.3E-65 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 ambt_11980 94de8362b4b7ae3befb34bb03c443bdf 351 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 191 329 1.3E-24 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain ambt_11980 94de8362b4b7ae3befb34bb03c443bdf 351 Gene3D G3DSA:1.10.1040.10 191 334 1.0E-29 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ambt_11980 94de8362b4b7ae3befb34bb03c443bdf 351 SUPERFAMILY SSF48179 190 330 6.46E-22 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_04330 b495d886c749a9c08895299f7ebdd211 140 Pfam PF07238 PilZ domain 4 109 4.8E-8 T 13-10-2018 IPR009875 PilZ domain GO:0035438 ambt_04330 b495d886c749a9c08895299f7ebdd211 140 Gene3D G3DSA:2.40.10.220 1 132 2.7E-26 T 13-10-2018 ambt_04330 b495d886c749a9c08895299f7ebdd211 140 SUPERFAMILY SSF141371 1 128 2.55E-18 T 13-10-2018 ambt_14595 a34f90bb61e57032becf2561169bd97b 187 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 6 170 22.196 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 ambt_14595 a34f90bb61e57032becf2561169bd97b 187 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 28 170 6.5E-43 T 13-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 ambt_14595 a34f90bb61e57032becf2561169bd97b 187 Pfam PF03968 OstA-like protein 38 148 2.5E-24 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal ambt_14595 a34f90bb61e57032becf2561169bd97b 187 Gene3D G3DSA:2.60.450.10 28 167 7.9E-39 T 13-10-2018 ambt_03755 3dcdc28f6daea1b237ac4fdacb39b81f 397 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 396 1.0E-155 T 13-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain ambt_03755 3dcdc28f6daea1b237ac4fdacb39b81f 397 SUPERFAMILY SSF52440 174 280 1.81E-38 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ambt_03755 3dcdc28f6daea1b237ac4fdacb39b81f 397 Gene3D G3DSA:3.30.1490.330 264 355 1.7E-20 T 13-10-2018 ambt_03755 3dcdc28f6daea1b237ac4fdacb39b81f 397 SUPERFAMILY SSF56059 1 395 2.61E-87 T 13-10-2018 ambt_19390 8d210e47b421e0986aae3726b5baed49 294 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 23 277 1.1E-85 T 13-10-2018 IPR017039 Virulence factor BrkB ambt_19390 8d210e47b421e0986aae3726b5baed49 294 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 20 294 23.793 T 13-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial ambt_19390 8d210e47b421e0986aae3726b5baed49 294 PIRSF PIRSF035875 7 294 1.2E-57 T 13-10-2018 IPR017039 Virulence factor BrkB ambt_19390 8d210e47b421e0986aae3726b5baed49 294 Pfam PF03631 Virulence factor BrkB 30 277 1.5E-53 T 13-10-2018 IPR017039 Virulence factor BrkB ambt_08835 b7f3f8054512397eccc3e358248f7e02 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_08835 b7f3f8054512397eccc3e358248f7e02 237 Pfam PF01259 SAICAR synthetase 7 232 1.6E-64 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_08835 b7f3f8054512397eccc3e358248f7e02 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 9.5E-78 T 13-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 ambt_08835 b7f3f8054512397eccc3e358248f7e02 237 SUPERFAMILY SSF56104 3 233 9.48E-80 T 13-10-2018 ambt_08835 b7f3f8054512397eccc3e358248f7e02 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_08835 b7f3f8054512397eccc3e358248f7e02 237 Gene3D G3DSA:3.30.470.20 85 221 5.8E-91 T 13-10-2018 ambt_08835 b7f3f8054512397eccc3e358248f7e02 237 Gene3D G3DSA:3.30.200.20 7 232 5.8E-91 T 13-10-2018 ambt_08835 b7f3f8054512397eccc3e358248f7e02 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 30.768 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_10975 db3e14929461c14c4ccd82533a17d73d 241 Pfam PF00574 Clp protease 34 171 1.6E-31 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ambt_10975 db3e14929461c14c4ccd82533a17d73d 241 Gene3D G3DSA:3.90.226.10 6 185 1.1E-43 T 13-10-2018 ambt_10975 db3e14929461c14c4ccd82533a17d73d 241 PRINTS PR00127 Clp protease catalytic subunit P signature 42 62 1.5E-10 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ambt_10975 db3e14929461c14c4ccd82533a17d73d 241 PRINTS PR00127 Clp protease catalytic subunit P signature 73 90 1.5E-10 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ambt_10975 db3e14929461c14c4ccd82533a17d73d 241 PRINTS PR00127 Clp protease catalytic subunit P signature 149 168 1.5E-10 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ambt_10975 db3e14929461c14c4ccd82533a17d73d 241 SUPERFAMILY SSF52096 13 174 3.7E-44 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_21595 3107281749ba607a79b406dceec16f66 159 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.0E-20 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ambt_21595 3107281749ba607a79b406dceec16f66 159 Gene3D G3DSA:3.10.50.30 77 159 1.1E-27 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 ambt_21595 3107281749ba607a79b406dceec16f66 159 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 3.2E-20 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ambt_21595 3107281749ba607a79b406dceec16f66 159 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ambt_21595 3107281749ba607a79b406dceec16f66 159 SUPERFAMILY SSF46557 3 78 7.59E-24 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ambt_21595 3107281749ba607a79b406dceec16f66 159 PIRSF PIRSF006092 1 158 2.2E-39 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 ambt_21595 3107281749ba607a79b406dceec16f66 159 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 24.547 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 ambt_21595 3107281749ba607a79b406dceec16f66 159 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 47.524 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 ambt_21595 3107281749ba607a79b406dceec16f66 159 SUPERFAMILY SSF54534 81 156 9.94E-18 T 13-10-2018 ambt_21595 3107281749ba607a79b406dceec16f66 159 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 1.5E-65 T 13-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 ambt_21595 3107281749ba607a79b406dceec16f66 159 Gene3D G3DSA:1.10.287.180 1 76 8.9E-26 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ambt_21595 3107281749ba607a79b406dceec16f66 159 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ambt_04305 970301f6d291a2c8732964fd9c8617d5 272 PIRSF PIRSF005902 1 267 3.2E-59 T 13-10-2018 IPR001130 TatD family GO:0016788 ambt_04305 970301f6d291a2c8732964fd9c8617d5 272 Gene3D G3DSA:3.20.20.140 1 265 2.1E-69 T 13-10-2018 ambt_04305 970301f6d291a2c8732964fd9c8617d5 272 SUPERFAMILY SSF51556 1 264 1.5E-62 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_04305 970301f6d291a2c8732964fd9c8617d5 272 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 1 9 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ambt_04305 970301f6d291a2c8732964fd9c8617d5 272 Pfam PF01026 TatD related DNase 2 264 4.7E-56 T 13-10-2018 IPR001130 TatD family GO:0016788 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 Gene3D G3DSA:3.40.50.620 1 305 2.6E-133 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 Gene3D G3DSA:1.20.120.640 306 459 1.2E-45 T 13-10-2018 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 9.6E-135 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 38.503 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 Pfam PF09190 DALR domain 342 402 1.8E-20 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 SUPERFAMILY SSF52374 2 312 1.18E-100 T 13-10-2018 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.9E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.9E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.9E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.9E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 SUPERFAMILY SSF47323 316 459 5.89E-36 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 5.6E-184 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ambt_05195 a76dc76cbfc29535d3587ae83a964d2f 460 SMART SM00840 342 402 2.3E-25 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 Gene3D G3DSA:3.40.50.720 2 253 5.0E-85 T 13-10-2018 ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 1.1E-67 T 13-10-2018 ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.1E-45 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09090 bb1652974ed22ed83c1b3bf93631307f 254 SUPERFAMILY SSF51735 5 253 2.21E-84 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_07500 90fd831a9602840d7cc1275db826ab55 249 Gene3D G3DSA:3.90.550.10 1 248 1.3E-87 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_07500 90fd831a9602840d7cc1275db826ab55 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 4.4E-99 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 ambt_07500 90fd831a9602840d7cc1275db826ab55 249 Pfam PF02348 Cytidylyltransferase 5 222 5.8E-60 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 ambt_07500 90fd831a9602840d7cc1275db826ab55 249 SUPERFAMILY SSF53448 3 244 2.05E-57 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_07500 90fd831a9602840d7cc1275db826ab55 249 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 249 42.247 T 13-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 ambt_08865 b539c5853f89986eddd1876c5cef557a 489 Gene3D G3DSA:1.25.40.10 244 345 4.6E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_08865 b539c5853f89986eddd1876c5cef557a 489 SUPERFAMILY SSF48452 311 463 1.11E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_08865 b539c5853f89986eddd1876c5cef557a 489 Gene3D G3DSA:1.25.40.10 346 438 1.1E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_08865 b539c5853f89986eddd1876c5cef557a 489 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 2 489 39.076 T 13-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 ambt_08865 b539c5853f89986eddd1876c5cef557a 489 Pfam PF01435 Peptidase family M48 75 261 3.4E-29 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ambt_08865 b539c5853f89986eddd1876c5cef557a 489 Gene3D G3DSA:3.30.2010.10 75 155 1.2E-8 T 13-10-2018 ambt_21010 603294fb585b552288ecc3c29f385efe 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 545 41.88 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ambt_21010 603294fb585b552288ecc3c29f385efe 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 5.1E-257 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ambt_21010 603294fb585b552288ecc3c29f385efe 546 Gene3D G3DSA:3.50.7.10 192 372 8.4E-242 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily ambt_21010 603294fb585b552288ecc3c29f385efe 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ambt_21010 603294fb585b552288ecc3c29f385efe 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 2.5E-99 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 ambt_21010 603294fb585b552288ecc3c29f385efe 546 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ambt_21010 603294fb585b552288ecc3c29f385efe 546 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ambt_21010 603294fb585b552288ecc3c29f385efe 546 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ambt_21010 603294fb585b552288ecc3c29f385efe 546 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ambt_21010 603294fb585b552288ecc3c29f385efe 546 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ambt_21010 603294fb585b552288ecc3c29f385efe 546 SUPERFAMILY SSF48592 7 521 9.92E-80 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily ambt_21010 603294fb585b552288ecc3c29f385efe 546 Gene3D G3DSA:1.10.560.10 8 521 8.4E-242 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily ambt_21010 603294fb585b552288ecc3c29f385efe 546 Gene3D G3DSA:3.30.260.10 136 410 8.4E-242 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ambt_21010 603294fb585b552288ecc3c29f385efe 546 SUPERFAMILY SSF54849 138 203 9.84E-24 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ambt_21010 603294fb585b552288ecc3c29f385efe 546 SUPERFAMILY SSF52029 185 376 3.14E-85 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 SUPERFAMILY SSF57716 217 268 3.03E-16 T 13-10-2018 ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 SUPERFAMILY SSF81624 2 138 1.26E-39 T 13-10-2018 IPR035937 MutM-like, N-terminal ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 SMART SM01232 129 221 1.7E-43 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 13-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 1.4E-9 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 5.3E-93 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 1.9E-24 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 Gene3D G3DSA:1.10.8.50 131 269 2.2E-47 T 13-10-2018 ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 SMART SM00898 2 115 3.6E-51 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 113 2.1E-28 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 Gene3D G3DSA:3.20.190.10 2 127 3.4E-38 T 13-10-2018 IPR035937 MutM-like, N-terminal ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 42.223 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 ambt_18705 fe3c6906cb7e9b2185da30315418c61f 269 SUPERFAMILY SSF46946 130 221 4.06E-28 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ambt_20430 927eb0ef7c5cc088e4336477c5b71ae0 332 Gene3D G3DSA:3.90.180.10 23 329 2.9E-118 T 13-10-2018 ambt_20430 927eb0ef7c5cc088e4336477c5b71ae0 332 Pfam PF00107 Zinc-binding dehydrogenase 159 282 5.1E-23 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ambt_20430 927eb0ef7c5cc088e4336477c5b71ae0 332 SMART SM00829 19 330 3.5E-7 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ambt_20430 927eb0ef7c5cc088e4336477c5b71ae0 332 SUPERFAMILY SSF51735 124 298 8.35E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_20430 927eb0ef7c5cc088e4336477c5b71ae0 332 SUPERFAMILY SSF50129 1 143 1.41E-34 T 13-10-2018 IPR011032 GroES-like superfamily ambt_20430 927eb0ef7c5cc088e4336477c5b71ae0 332 Pfam PF16884 N-terminal domain of oxidoreductase 5 114 2.1E-34 T 13-10-2018 ambt_20430 927eb0ef7c5cc088e4336477c5b71ae0 332 Gene3D G3DSA:3.40.50.720 126 301 2.9E-118 T 13-10-2018 ambt_17525 84534a5d5cec9f6807c5db533f0ba152 164 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 30 162 1.1E-14 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 ambt_17525 84534a5d5cec9f6807c5db533f0ba152 164 SUPERFAMILY SSF54637 14 162 2.31E-24 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_17525 84534a5d5cec9f6807c5db533f0ba152 164 Gene3D G3DSA:3.10.129.10 2 164 2.9E-54 T 13-10-2018 ambt_17525 84534a5d5cec9f6807c5db533f0ba152 164 Pfam PF03061 Thioesterase superfamily 66 152 2.5E-15 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ambt_15725 3939a35fc81b10a8bdd0083e46777bc1 265 SUPERFAMILY SSF53850 26 243 1.4E-35 T 13-10-2018 ambt_15725 3939a35fc81b10a8bdd0083e46777bc1 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 244 6.0E-24 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_15725 3939a35fc81b10a8bdd0083e46777bc1 265 Gene3D G3DSA:3.40.190.10 107 207 1.0E-26 T 13-10-2018 ambt_15725 3939a35fc81b10a8bdd0083e46777bc1 265 SMART SM00062 25 251 1.6E-4 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_15725 3939a35fc81b10a8bdd0083e46777bc1 265 Gene3D G3DSA:3.40.190.10 31 243 1.0E-26 T 13-10-2018 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 Gene3D G3DSA:3.30.870.10 504 690 8.5E-73 T 13-10-2018 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 SUPERFAMILY SSF140356 3 107 6.15E-30 T 13-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 Pfam PF02503 Polyphosphate kinase middle domain 122 322 1.0E-37 T 13-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 112 4.6E-32 T 13-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 Gene3D G3DSA:3.30.1840.10 113 311 6.3E-62 T 13-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 Pfam PF13090 Polyphosphate kinase C-terminal domain 334 680 2.9E-140 T 13-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 PIRSF PIRSF015589 1 693 3.0E-235 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 SUPERFAMILY SSF143724 110 316 3.34E-56 T 13-10-2018 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 SUPERFAMILY SSF56024 504 686 3.59E-68 T 13-10-2018 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 SUPERFAMILY SSF56024 321 495 1.7E-50 T 13-10-2018 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 Gene3D G3DSA:3.30.870.10 324 503 4.1E-67 T 13-10-2018 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 681 7.3E-249 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 685 26.434 T 13-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ambt_14375 56a79a2d1aa28243c72d81c34225a79f 693 Gene3D G3DSA:1.20.58.310 9 112 6.8E-33 T 13-10-2018 ambt_07690 6c68fccdc87c37981946282c52bccf08 862 Pfam PF01804 Penicillin amidase 65 848 6.1E-126 T 13-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 ambt_07690 6c68fccdc87c37981946282c52bccf08 862 SUPERFAMILY SSF56235 65 857 6.95E-147 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_07690 6c68fccdc87c37981946282c52bccf08 862 Gene3D G3DSA:1.10.439.10 58 226 5.5E-53 T 13-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 ambt_07690 6c68fccdc87c37981946282c52bccf08 862 Gene3D G3DSA:2.30.120.10 354 430 7.5E-178 T 13-10-2018 ambt_07690 6c68fccdc87c37981946282c52bccf08 862 Gene3D G3DSA:3.60.20.10 278 847 7.5E-178 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_07690 6c68fccdc87c37981946282c52bccf08 862 Gene3D G3DSA:1.10.1400.10 571 782 7.5E-178 T 13-10-2018 ambt_20465 55f18c4e983aaa3729065d844ed3da8d 411 Pfam PF02687 FtsX-like permease family 310 400 8.5E-8 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ambt_20465 55f18c4e983aaa3729065d844ed3da8d 411 Pfam PF12704 MacB-like periplasmic core domain 18 205 3.1E-12 T 13-10-2018 IPR025857 MacB-like periplasmic core domain ambt_21590 d56124a03c44b480da7f9e7bb5126ec2 90 SUPERFAMILY SSF46689 2 85 7.53E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_10690 326109db8848c4119461accc86f88d31 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.7E-26 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ambt_10690 326109db8848c4119461accc86f88d31 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.5E-20 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ambt_10690 326109db8848c4119461accc86f88d31 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.5E-20 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ambt_10690 326109db8848c4119461accc86f88d31 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.5E-20 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ambt_10690 326109db8848c4119461accc86f88d31 65 Pfam PF01632 Ribosomal protein L35 2 62 2.3E-24 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10690 326109db8848c4119461accc86f88d31 65 SUPERFAMILY SSF143034 2 64 3.27E-24 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10690 326109db8848c4119461accc86f88d31 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.675 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ambt_10690 326109db8848c4119461accc86f88d31 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_10690 326109db8848c4119461accc86f88d31 65 Gene3D G3DSA:2.40.50.530 1 64 2.0E-22 T 13-10-2018 ambt_04255 062303ac81176738b3685274e1ec8101 192 Gene3D G3DSA:1.10.10.10 123 191 8.9E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_04255 062303ac81176738b3685274e1ec8101 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 184 1.8E-33 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_04255 062303ac81176738b3685274e1ec8101 192 SUPERFAMILY SSF88659 124 186 6.54E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_04255 062303ac81176738b3685274e1ec8101 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 190 3.3E-98 T 13-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_04255 062303ac81176738b3685274e1ec8101 192 Pfam PF04542 Sigma-70 region 2 25 92 1.1E-18 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_04255 062303ac81176738b3685274e1ec8101 192 Pfam PF08281 Sigma-70, region 4 135 181 7.0E-16 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_04255 062303ac81176738b3685274e1ec8101 192 SUPERFAMILY SSF88946 2 108 1.73E-31 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_04255 062303ac81176738b3685274e1ec8101 192 Gene3D G3DSA:1.10.1740.10 1 121 3.3E-44 T 13-10-2018 ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 SUPERFAMILY SSF52172 1 174 5.14E-5 T 13-10-2018 IPR011006 CheY-like superfamily ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 Gene3D G3DSA:3.40.50.2300 1 120 3.1E-5 T 13-10-2018 ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 154 167 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 Gene3D G3DSA:1.10.10.60 419 479 1.4E-14 T 13-10-2018 ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 Pfam PF06490 Flagellar regulatory protein FleQ 4 108 1.9E-20 T 13-10-2018 IPR010518 Flagellar regulatory FleQ ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 Pfam PF00158 Sigma-54 interaction domain 130 296 1.8E-72 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 SUPERFAMILY SSF46689 427 477 3.09E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 Gene3D G3DSA:3.40.50.300 121 301 1.1E-65 T 13-10-2018 ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 SMART SM00382 150 294 1.4E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 441 458 2.1E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 458 478 2.1E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 Gene3D G3DSA:1.10.8.60 302 377 1.6E-22 T 13-10-2018 ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 216 231 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 SUPERFAMILY SSF52540 130 372 1.49E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13310 8d5108ce9ed240a408d22fbe30725882 483 Pfam PF02954 Bacterial regulatory protein, Fis family 435 475 1.4E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_19775 bbdf8afe8633f5167fc411c1f7f37fa4 321 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 35 59 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ambt_19775 bbdf8afe8633f5167fc411c1f7f37fa4 321 SUPERFAMILY SSF53613 1 319 7.33E-74 T 13-10-2018 IPR029056 Ribokinase-like ambt_19775 bbdf8afe8633f5167fc411c1f7f37fa4 321 Pfam PF00294 pfkB family carbohydrate kinase 2 315 2.8E-60 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB ambt_19775 bbdf8afe8633f5167fc411c1f7f37fa4 321 Gene3D G3DSA:3.40.1190.20 1 321 2.2E-91 T 13-10-2018 IPR029056 Ribokinase-like ambt_19775 bbdf8afe8633f5167fc411c1f7f37fa4 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 253 266 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 495 512 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 147 166 4.9E-52 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 481 495 4.9E-52 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 495 508 4.9E-52 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 463 481 4.9E-52 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 336 357 4.9E-52 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 259 277 4.9E-52 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 43 522 40.316 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 SUPERFAMILY SSF53697 3 545 3.61E-206 T 13-10-2018 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 Pfam PF00342 Phosphoglucose isomerase 49 539 2.9E-210 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 Gene3D G3DSA:3.40.50.10490 10 504 1.2E-221 T 13-10-2018 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 263 276 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 Gene3D G3DSA:1.10.1390.10 505 546 4.9E-17 T 13-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_01975 deba937ded2ef3485f310edd677a0eff 549 Gene3D G3DSA:3.40.50.10490 95 289 1.2E-221 T 13-10-2018 ambt_20010 08470a50ff495d1452791a9297113aa9 360 Pfam PF13682 Chemoreceptor zinc-binding domain 260 326 1.2E-11 T 13-10-2018 IPR025991 Chemoreceptor zinc-binding domain ambt_20010 08470a50ff495d1452791a9297113aa9 360 SUPERFAMILY SSF58104 62 262 4.45E-47 T 13-10-2018 ambt_20010 08470a50ff495d1452791a9297113aa9 360 Gene3D G3DSA:1.10.287.950 7 266 3.6E-46 T 13-10-2018 ambt_20010 08470a50ff495d1452791a9297113aa9 360 SMART SM00283 42 266 2.5E-19 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_20010 08470a50ff495d1452791a9297113aa9 360 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 107 251 4.8E-33 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_02265 b82129e3ae85225ec31cf75c9252cb3e 250 Gene3D G3DSA:1.10.3900.10 12 178 3.5E-81 T 13-10-2018 ambt_02265 b82129e3ae85225ec31cf75c9252cb3e 250 SUPERFAMILY SSF160950 2 250 3.4E-79 T 13-10-2018 IPR036268 ZapD domain superfamily ambt_02265 b82129e3ae85225ec31cf75c9252cb3e 250 Pfam PF07072 Cell division protein 18 225 2.1E-72 T 13-10-2018 IPR009777 Cell division protein ZapD ambt_02265 b82129e3ae85225ec31cf75c9252cb3e 250 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 250 30.977 T 13-10-2018 IPR009777 Cell division protein ZapD ambt_02265 b82129e3ae85225ec31cf75c9252cb3e 250 Gene3D G3DSA:2.60.440.10 5 250 3.5E-81 T 13-10-2018 IPR027462 Z ring-associated protein D, C-terminal ambt_02290 5de3c464a796485dc435a0aa247075b6 284 Gene3D G3DSA:3.90.1170.20 9 280 4.9E-113 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 ambt_02290 5de3c464a796485dc435a0aa247075b6 284 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 117 280 5.1E-58 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 ambt_02290 5de3c464a796485dc435a0aa247075b6 284 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 29 114 8.7E-27 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 ambt_02290 5de3c464a796485dc435a0aa247075b6 284 Gene3D G3DSA:3.20.20.70 125 271 4.9E-113 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_02290 5de3c464a796485dc435a0aa247075b6 284 PIRSF PIRSF006250 5 284 6.6E-98 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 ambt_02290 5de3c464a796485dc435a0aa247075b6 284 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 280 8.0E-94 T 13-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 ambt_02290 5de3c464a796485dc435a0aa247075b6 284 SUPERFAMILY SSF54675 7 114 1.13E-29 T 13-10-2018 ambt_02290 5de3c464a796485dc435a0aa247075b6 284 SUPERFAMILY SSF51690 117 280 4.32E-58 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ambt_08210 cee601b34307c39ad4e62556b56f421a 524 SUPERFAMILY SSF51735 387 512 9.2E-17 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_08210 cee601b34307c39ad4e62556b56f421a 524 Gene3D G3DSA:3.40.50.720 381 522 1.4E-27 T 13-10-2018 ambt_08210 cee601b34307c39ad4e62556b56f421a 524 Pfam PF02254 TrkA-N domain 387 502 1.5E-18 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ambt_08210 cee601b34307c39ad4e62556b56f421a 524 Pfam PF00999 Sodium/hydrogen exchanger family 6 347 2.1E-40 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ambt_08210 cee601b34307c39ad4e62556b56f421a 524 Gene3D G3DSA:1.20.1530.20 3 364 3.6E-47 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily ambt_05785 014ad397ca4bf574097bb78052f9104c 203 SMART SM00749 134 197 7.0E-10 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria ambt_05785 014ad397ca4bf574097bb78052f9104c 203 SMART SM00749 39 102 5.1 T 13-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria ambt_05785 014ad397ca4bf574097bb78052f9104c 203 Pfam PF04972 BON domain 129 195 3.1E-19 T 13-10-2018 IPR007055 BON domain ambt_05785 014ad397ca4bf574097bb78052f9104c 203 Pfam PF04972 BON domain 35 100 2.3E-17 T 13-10-2018 IPR007055 BON domain ambt_14515 0789a6b0bdbd4b9267ed723af4270d91 240 Pfam PF01709 Transcriptional regulator 5 235 1.8E-75 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_14515 0789a6b0bdbd4b9267ed723af4270d91 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.083 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_14515 0789a6b0bdbd4b9267ed723af4270d91 240 Gene3D G3DSA:3.30.70.980 83 235 5.5E-46 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_14515 0789a6b0bdbd4b9267ed723af4270d91 240 SUPERFAMILY SSF75625 1 235 3.4E-76 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_14515 0789a6b0bdbd4b9267ed723af4270d91 240 Gene3D G3DSA:1.10.10.200 17 78 1.1E-17 T 13-10-2018 IPR017856 Integrase-like, N-terminal ambt_14515 0789a6b0bdbd4b9267ed723af4270d91 240 Gene3D G3DSA:3.30.70.980 127 204 5.5E-46 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_19810 1f48cf9261b106701f68180c97eabc9d 269 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 17 263 9.5E-77 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 ambt_19810 1f48cf9261b106701f68180c97eabc9d 269 Pfam PF08241 Methyltransferase domain 92 187 1.2E-21 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ambt_19810 1f48cf9261b106701f68180c97eabc9d 269 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 17 269 34.798 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 ambt_19810 1f48cf9261b106701f68180c97eabc9d 269 SUPERFAMILY SSF53335 10 251 1.41E-39 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 SUPERFAMILY SSF51735 22 273 3.31E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 Gene3D G3DSA:3.40.50.720 14 275 1.3E-73 T 13-10-2018 ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 33 271 3.8E-47 T 13-10-2018 ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 169 197 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 97 108 5.9E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 170 5.9E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 182 201 5.9E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 25 42 5.0E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 97 108 5.0E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 257 5.0E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 172 5.0E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 201 5.0E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09505 c62a46c7dcd4b7bea5e6b092e71c3060 276 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 220 5.0E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_21790 84100729a24d0329971e406805b812c7 504 Pfam PF01078 Magnesium chelatase, subunit ChlI 192 389 7.1E-85 T 13-10-2018 IPR000523 Magnesium chelatase ChlI domain ambt_21790 84100729a24d0329971e406805b812c7 504 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 406 492 2.1E-25 T 13-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain ambt_21790 84100729a24d0329971e406805b812c7 504 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 10 492 2.9E-171 T 13-10-2018 IPR004482 Mg chelatase-related protein ambt_21790 84100729a24d0329971e406805b812c7 504 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 133 8.5E-41 T 13-10-2018 ambt_21790 84100729a24d0329971e406805b812c7 504 SMART SM00382 210 388 3.4E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_21790 84100729a24d0329971e406805b812c7 504 Gene3D G3DSA:3.40.50.300 177 496 2.6E-53 T 13-10-2018 ambt_21790 84100729a24d0329971e406805b812c7 504 SUPERFAMILY SSF54211 11 169 5.69E-26 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_21790 84100729a24d0329971e406805b812c7 504 Gene3D G3DSA:3.30.230.10 5 147 2.5E-6 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_21790 84100729a24d0329971e406805b812c7 504 SUPERFAMILY SSF52540 189 497 3.38E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 42.736 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 430 3.6E-10 T 13-10-2018 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 SUPERFAMILY SSF54211 255 454 7.97E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 Gene3D G3DSA:3.40.50.300 66 279 8.2E-37 T 13-10-2018 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 SUPERFAMILY SSF52540 68 291 2.0E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 1.6E-217 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 Pfam PF13481 AAA domain 79 222 4.6E-11 T 13-10-2018 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 SMART SM00382 91 244 2.7E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 PRINTS PR01874 DNA repair protein radA signature 10 34 6.5E-94 T 13-10-2018 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 PRINTS PR01874 DNA repair protein radA signature 174 198 6.5E-94 T 13-10-2018 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 PRINTS PR01874 DNA repair protein radA signature 322 345 6.5E-94 T 13-10-2018 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 PRINTS PR01874 DNA repair protein radA signature 248 274 6.5E-94 T 13-10-2018 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 PRINTS PR01874 DNA repair protein radA signature 83 111 6.5E-94 T 13-10-2018 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 PRINTS PR01874 DNA repair protein radA signature 124 141 6.5E-94 T 13-10-2018 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 PRINTS PR01874 DNA repair protein radA signature 213 241 6.5E-94 T 13-10-2018 ambt_04325 26201a2e20236b8fe893fe041d17a9ff 455 Gene3D G3DSA:3.30.230.10 295 455 2.0E-21 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_21230 053b89ead98c1decf66eb0cb6cc4c1cd 375 Pfam PF13437 HlyD family secretion protein 180 255 1.1E-6 T 13-10-2018 ambt_21230 053b89ead98c1decf66eb0cb6cc4c1cd 375 SUPERFAMILY SSF111369 58 233 5.62E-13 T 13-10-2018 ambt_21230 053b89ead98c1decf66eb0cb6cc4c1cd 375 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 43 335 2.3E-28 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_21230 053b89ead98c1decf66eb0cb6cc4c1cd 375 Gene3D G3DSA:1.10.287.470 103 174 2.5E-35 T 13-10-2018 ambt_21230 053b89ead98c1decf66eb0cb6cc4c1cd 375 Gene3D G3DSA:2.40.30.170 56 292 2.5E-35 T 13-10-2018 ambt_21230 053b89ead98c1decf66eb0cb6cc4c1cd 375 Gene3D G3DSA:2.40.420.20 293 334 2.5E-35 T 13-10-2018 ambt_21230 053b89ead98c1decf66eb0cb6cc4c1cd 375 Gene3D G3DSA:2.40.50.100 67 213 2.5E-35 T 13-10-2018 ambt_02665 7e05e7a921f05cfb81bb4ed6b241de89 430 SMART SM00387 319 424 3.7E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_02665 7e05e7a921f05cfb81bb4ed6b241de89 430 Gene3D G3DSA:3.30.565.10 305 428 1.3E-20 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_02665 7e05e7a921f05cfb81bb4ed6b241de89 430 SMART SM00388 218 285 1.5E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_02665 7e05e7a921f05cfb81bb4ed6b241de89 430 SUPERFAMILY SSF55874 283 422 4.98E-22 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_02665 7e05e7a921f05cfb81bb4ed6b241de89 430 SUPERFAMILY SSF47384 207 284 1.1E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_02665 7e05e7a921f05cfb81bb4ed6b241de89 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 420 1.7E-11 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_02665 7e05e7a921f05cfb81bb4ed6b241de89 430 Gene3D G3DSA:1.10.287.130 207 285 9.4E-8 T 13-10-2018 ambt_19850 01268011cad67658ba14c2d40c73c800 383 Pfam PF01145 SPFH domain / Band 7 family 75 246 7.7E-26 T 13-10-2018 IPR001107 Band 7 domain ambt_19850 01268011cad67658ba14c2d40c73c800 383 SUPERFAMILY SSF117892 104 236 6.93E-22 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily ambt_19850 01268011cad67658ba14c2d40c73c800 383 Gene3D G3DSA:3.30.479.30 100 233 1.6E-18 T 13-10-2018 ambt_19850 01268011cad67658ba14c2d40c73c800 383 SMART SM00244 71 231 4.2E-40 T 13-10-2018 IPR001107 Band 7 domain ambt_19850 01268011cad67658ba14c2d40c73c800 383 Pfam PF12221 Bacterial membrane protein N terminal 1 44 2.4E-11 T 13-10-2018 IPR020980 Menbrane protein HflK, N-terminal ambt_19850 01268011cad67658ba14c2d40c73c800 383 PRINTS PR00721 Stomatin signature 78 100 1.3E-5 T 13-10-2018 IPR001972 Stomatin family GO:0016020 ambt_19850 01268011cad67658ba14c2d40c73c800 383 PRINTS PR00721 Stomatin signature 125 146 1.3E-5 T 13-10-2018 IPR001972 Stomatin family GO:0016020 ambt_19850 01268011cad67658ba14c2d40c73c800 383 PRINTS PR00721 Stomatin signature 207 225 1.3E-5 T 13-10-2018 IPR001972 Stomatin family GO:0016020 ambt_19850 01268011cad67658ba14c2d40c73c800 383 TIGRFAM TIGR01933 hflK: HflK protein 73 333 3.1E-108 T 13-10-2018 IPR010201 HflK GO:0016021 ambt_15545 b65b99245bb05e5e2d5cb5c2473f3bb2 324 SUPERFAMILY SSF48576 5 323 7.77E-98 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily ambt_15545 b65b99245bb05e5e2d5cb5c2473f3bb2 324 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site ambt_15545 b65b99245bb05e5e2d5cb5c2473f3bb2 324 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site ambt_15545 b65b99245bb05e5e2d5cb5c2473f3bb2 324 Gene3D G3DSA:1.10.600.10 1 324 3.2E-113 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily ambt_15545 b65b99245bb05e5e2d5cb5c2473f3bb2 324 Pfam PF00348 Polyprenyl synthetase 32 263 1.4E-74 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 ambt_04145 2c01a75a28598fa3b0e7dfc88a36b19d 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 61 69 3.7E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ambt_04145 2c01a75a28598fa3b0e7dfc88a36b19d 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 145 161 3.7E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ambt_04145 2c01a75a28598fa3b0e7dfc88a36b19d 181 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 109 124 3.7E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ambt_04145 2c01a75a28598fa3b0e7dfc88a36b19d 181 TIGRFAM TIGR00077 lspA: signal peptidase II 15 171 5.1E-47 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ambt_04145 2c01a75a28598fa3b0e7dfc88a36b19d 181 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 15 170 17.805 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ambt_04145 2c01a75a28598fa3b0e7dfc88a36b19d 181 Pfam PF01252 Signal peptidase (SPase) II 24 164 2.2E-42 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ambt_04145 2c01a75a28598fa3b0e7dfc88a36b19d 181 ProSitePatterns PS00855 Signal peptidases II signature. 112 124 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ambt_16530 f1b9f030b74e2fdbb0af1e2d6f3ef968 99 SUPERFAMILY SSF54189 3 92 7.19E-32 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_16530 f1b9f030b74e2fdbb0af1e2d6f3ef968 99 Pfam PF00276 Ribosomal protein L23 8 94 7.6E-33 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ambt_16530 f1b9f030b74e2fdbb0af1e2d6f3ef968 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 97 22.558 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ambt_16530 f1b9f030b74e2fdbb0af1e2d6f3ef968 99 Gene3D G3DSA:3.30.70.330 1 99 3.3E-38 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 284 388 3.3E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 Pfam PF00512 His Kinase A (phospho-acceptor) domain 174 233 2.6E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 SMART SM00387 283 390 3.3E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 Gene3D G3DSA:3.30.565.10 244 388 1.7E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 SMART SM00388 173 238 4.3E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 SUPERFAMILY SSF55874 250 386 2.62E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 Gene3D G3DSA:3.30.450.40 3 153 6.2E-8 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 371 3.4E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 334 3.4E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 348 3.4E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 SUPERFAMILY SSF47384 165 236 1.12E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 Pfam PF01590 GAF domain 17 148 3.5E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 Gene3D G3DSA:1.10.287.130 164 239 7.8E-12 T 13-10-2018 ambt_19990 c82f6c5e7a07e89c886fa200fab0e9f5 390 SUPERFAMILY SSF55781 17 153 1.92E-14 T 13-10-2018 ambt_15440 3f91d7a56ce89f2c938dfa32d6a478d8 226 Gene3D G3DSA:1.10.10.10 120 226 8.0E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_15440 3f91d7a56ce89f2c938dfa32d6a478d8 226 SUPERFAMILY SSF52172 1 126 6.69E-39 T 13-10-2018 IPR011006 CheY-like superfamily ambt_15440 3f91d7a56ce89f2c938dfa32d6a478d8 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 217 8.5E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_15440 3f91d7a56ce89f2c938dfa32d6a478d8 226 SMART SM00862 145 219 2.5E-12 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_15440 3f91d7a56ce89f2c938dfa32d6a478d8 226 Gene3D G3DSA:3.40.50.2300 1 119 4.4E-36 T 13-10-2018 ambt_15440 3f91d7a56ce89f2c938dfa32d6a478d8 226 Pfam PF00072 Response regulator receiver domain 4 113 2.6E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_15440 3f91d7a56ce89f2c938dfa32d6a478d8 226 SMART SM00448 2 113 2.4E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_15440 3f91d7a56ce89f2c938dfa32d6a478d8 226 SUPERFAMILY SSF46894 123 220 1.42E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_02430 3cfdb6b24adaaef927cc07874aec4c58 394 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 393 3.7E-122 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 ambt_02430 3cfdb6b24adaaef927cc07874aec4c58 394 SUPERFAMILY SSF51905 4 386 1.02E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_02430 3cfdb6b24adaaef927cc07874aec4c58 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 6.2E-20 T 13-10-2018 ambt_02430 3cfdb6b24adaaef927cc07874aec4c58 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 6.2E-20 T 13-10-2018 ambt_02430 3cfdb6b24adaaef927cc07874aec4c58 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 6.2E-20 T 13-10-2018 ambt_02430 3cfdb6b24adaaef927cc07874aec4c58 394 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 6.2E-20 T 13-10-2018 ambt_02430 3cfdb6b24adaaef927cc07874aec4c58 394 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 297 310 - T 13-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 ambt_02430 3cfdb6b24adaaef927cc07874aec4c58 394 Pfam PF01494 FAD binding domain 4 349 2.1E-32 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 ambt_02430 3cfdb6b24adaaef927cc07874aec4c58 394 Gene3D G3DSA:3.30.9.50 79 272 8.0E-108 T 13-10-2018 ambt_02430 3cfdb6b24adaaef927cc07874aec4c58 394 Gene3D G3DSA:3.50.50.60 5 341 8.0E-108 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_04085 eea9758d84441556e32c32e62975de09 387 Pfam PF07687 Peptidase dimerisation domain 185 288 4.6E-19 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain ambt_04085 eea9758d84441556e32c32e62975de09 387 Gene3D G3DSA:3.30.70.360 189 302 1.9E-106 T 13-10-2018 ambt_04085 eea9758d84441556e32c32e62975de09 387 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 15 386 1.1E-116 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 ambt_04085 eea9758d84441556e32c32e62975de09 387 SUPERFAMILY SSF53187 11 386 9.56E-53 T 13-10-2018 ambt_04085 eea9758d84441556e32c32e62975de09 387 SUPERFAMILY SSF55031 189 296 1.33E-22 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ambt_04085 eea9758d84441556e32c32e62975de09 387 Gene3D G3DSA:3.40.630.10 19 376 1.9E-106 T 13-10-2018 ambt_04085 eea9758d84441556e32c32e62975de09 387 Pfam PF01546 Peptidase family M20/M25/M40 72 384 3.3E-35 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 ambt_04085 eea9758d84441556e32c32e62975de09 387 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 12 387 41.996 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 ambt_15930 92b15a60b050f8e0bac661da939a9bba 572 SUPERFAMILY SSF52518 369 568 1.62E-66 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_15930 92b15a60b050f8e0bac661da939a9bba 572 Gene3D G3DSA:3.40.50.970 1 177 1.5E-69 T 13-10-2018 ambt_15930 92b15a60b050f8e0bac661da939a9bba 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 565 1.5E-259 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ambt_15930 92b15a60b050f8e0bac661da939a9bba 572 Gene3D G3DSA:3.40.50.1220 189 360 2.6E-61 T 13-10-2018 ambt_15930 92b15a60b050f8e0bac661da939a9bba 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 542 3.7E-48 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ambt_15930 92b15a60b050f8e0bac661da939a9bba 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.1E-45 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ambt_15930 92b15a60b050f8e0bac661da939a9bba 572 SUPERFAMILY SSF52467 190 362 2.91E-63 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ambt_15930 92b15a60b050f8e0bac661da939a9bba 572 SUPERFAMILY SSF52518 3 183 5.89E-64 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_15930 92b15a60b050f8e0bac661da939a9bba 572 Gene3D G3DSA:3.40.50.970 364 565 8.3E-64 T 13-10-2018 ambt_15930 92b15a60b050f8e0bac661da939a9bba 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 ambt_15930 92b15a60b050f8e0bac661da939a9bba 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 171 1.0E-56 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 Gene3D G3DSA:2.40.37.10 9 348 2.5E-118 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 Pfam PF01168 Alanine racemase, N-terminal domain 9 219 6.4E-55 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 SUPERFAMILY SSF51419 9 227 3.93E-57 T 13-10-2018 IPR029066 PLP-binding barrel ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 PRINTS PR00992 Alanine racemase signature 155 166 1.1E-62 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 PRINTS PR00992 Alanine racemase signature 245 260 1.1E-62 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 PRINTS PR00992 Alanine racemase signature 283 300 1.1E-62 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 PRINTS PR00992 Alanine racemase signature 62 80 1.1E-62 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 PRINTS PR00992 Alanine racemase signature 122 134 1.1E-62 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 PRINTS PR00992 Alanine racemase signature 335 348 1.1E-62 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 PRINTS PR00992 Alanine racemase signature 262 277 1.1E-62 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 PRINTS PR00992 Alanine racemase signature 27 43 1.1E-62 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 PRINTS PR00992 Alanine racemase signature 192 219 1.1E-62 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 Pfam PF00842 Alanine racemase, C-terminal domain 230 351 2.3E-44 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 SUPERFAMILY SSF50621 223 352 9.07E-49 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 Hamap MF_01201 Alanine racemase. 2 353 32.667 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 SMART SM01005 229 353 7.0E-69 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 TIGRFAM TIGR00492 alr: alanine racemase 3 351 2.1E-100 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_15750 4fffd3b543ed26775e59fd39c13650bb 355 Gene3D G3DSA:3.20.20.10 11 217 2.5E-118 T 13-10-2018 IPR029066 PLP-binding barrel ambt_17585 b0da6c9f695ac49017dd526e416b2645 351 Pfam PF01385 Probable transposase 161 252 1.6E-8 T 13-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 ambt_17585 b0da6c9f695ac49017dd526e416b2645 351 Pfam PF07282 Putative transposase DNA-binding domain 265 337 1.8E-21 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal ambt_17585 b0da6c9f695ac49017dd526e416b2645 351 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 220 291 6.2E-10 T 13-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal ambt_11440 b4cee5fc5bd0dc3f7890c95ef746cf3a 129 Pfam PF11528 Protein of unknown function (DUF3224) 4 126 5.4E-36 T 13-10-2018 IPR021607 Protein of unknown function DUF3224 ambt_11440 b4cee5fc5bd0dc3f7890c95ef746cf3a 129 SUPERFAMILY SSF159238 3 127 3.01E-32 T 13-10-2018 IPR023159 SO1590-like superfamily ambt_11440 b4cee5fc5bd0dc3f7890c95ef746cf3a 129 Gene3D G3DSA:2.40.350.10 1 129 7.0E-39 T 13-10-2018 IPR023159 SO1590-like superfamily ambt_20585 06fff8d4a6e0d239ae82536ae40b7796 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 9 457 9.6E-181 T 13-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 ambt_20585 06fff8d4a6e0d239ae82536ae40b7796 462 SUPERFAMILY SSF52467 286 460 2.56E-68 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ambt_20585 06fff8d4a6e0d239ae82536ae40b7796 462 Gene3D G3DSA:3.40.50.1220 278 460 1.0E-80 T 13-10-2018 ambt_20585 06fff8d4a6e0d239ae82536ae40b7796 462 PIRSF PIRSF000204 4 461 1.5E-176 T 13-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 ambt_11875 06a442f46edaaaf19d04b217f065c109 465 Gene3D G3DSA:3.30.930.10 101 464 3.9E-110 T 13-10-2018 ambt_11875 06a442f46edaaaf19d04b217f065c109 465 SUPERFAMILY SSF50249 15 101 5.57E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_11875 06a442f46edaaaf19d04b217f065c109 465 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 465 45.377 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 ambt_11875 06a442f46edaaaf19d04b217f065c109 465 SUPERFAMILY SSF55681 94 463 3.11E-98 T 13-10-2018 ambt_11875 06a442f46edaaaf19d04b217f065c109 465 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 465 1.6E-198 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 ambt_11875 06a442f46edaaaf19d04b217f065c109 465 Gene3D G3DSA:2.40.50.140 1 100 1.4E-20 T 13-10-2018 ambt_11875 06a442f46edaaaf19d04b217f065c109 465 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 6.7E-10 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ambt_11875 06a442f46edaaaf19d04b217f065c109 465 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 459 2.0E-82 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_11875 06a442f46edaaaf19d04b217f065c109 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 219 6.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_11875 06a442f46edaaaf19d04b217f065c109 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 223 236 6.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_11875 06a442f46edaaaf19d04b217f065c109 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 380 396 6.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_11875 06a442f46edaaaf19d04b217f065c109 465 PRINTS PR01042 Aspartyl-tRNA synthetase signature 420 434 6.6E-14 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_14880 610b5a6111bce919efd2725961ff2f70 202 SUPERFAMILY SSF74653 113 193 1.44E-24 T 13-10-2018 ambt_14880 610b5a6111bce919efd2725961ff2f70 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 138 156 3.2E-12 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_14880 610b5a6111bce919efd2725961ff2f70 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 117 138 3.2E-12 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_14880 610b5a6111bce919efd2725961ff2f70 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 59 69 3.2E-12 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_14880 610b5a6111bce919efd2725961ff2f70 202 PRINTS PR01374 Gram-negative bacterial tonB protein signature 157 174 3.2E-12 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_14880 610b5a6111bce919efd2725961ff2f70 202 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 122 199 7.0E-19 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 ambt_14880 610b5a6111bce919efd2725961ff2f70 202 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 123 198 3.1E-15 T 13-10-2018 IPR006260 TonB/TolA, C-terminal ambt_14880 610b5a6111bce919efd2725961ff2f70 202 Gene3D G3DSA:3.30.1150.10 107 201 3.8E-23 T 13-10-2018 ambt_02210 80dc919580077f238fde6edde81157ef 482 SUPERFAMILY SSF53623 101 318 8.37E-74 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_02210 80dc919580077f238fde6edde81157ef 482 SUPERFAMILY SSF51984 16 102 2.49E-28 T 13-10-2018 ambt_02210 80dc919580077f238fde6edde81157ef 482 Gene3D G3DSA:3.40.1190.10 104 317 6.3E-83 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_02210 80dc919580077f238fde6edde81157ef 482 SUPERFAMILY SSF53244 319 466 1.63E-47 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_02210 80dc919580077f238fde6edde81157ef 482 Pfam PF01225 Mur ligase family, catalytic domain 18 114 2.6E-22 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ambt_02210 80dc919580077f238fde6edde81157ef 482 Pfam PF08245 Mur ligase middle domain 120 300 1.5E-32 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ambt_02210 80dc919580077f238fde6edde81157ef 482 Gene3D G3DSA:3.40.50.720 16 103 3.0E-30 T 13-10-2018 ambt_02210 80dc919580077f238fde6edde81157ef 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 410 2.6E-21 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ambt_02210 80dc919580077f238fde6edde81157ef 482 Gene3D G3DSA:3.90.190.20 318 481 4.4E-49 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_02210 80dc919580077f238fde6edde81157ef 482 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 472 42.768 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_02210 80dc919580077f238fde6edde81157ef 482 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 17 464 2.4E-175 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 Gene3D G3DSA:1.20.1640.10 111 608 2.5E-168 T 13-10-2018 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 SUPERFAMILY SSF82693 163 259 5.75E-21 T 13-10-2018 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 SUPERFAMILY SSF82866 1 99 2.09E-23 T 13-10-2018 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 Pfam PF00873 AcrB/AcrD/AcrF family 1 611 4.1E-156 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 Gene3D G3DSA:1.20.1640.10 1 110 2.5E-168 T 13-10-2018 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 SUPERFAMILY SSF82866 423 612 1.57E-42 T 13-10-2018 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 Gene3D G3DSA:3.30.2090.10 308 396 2.5E-168 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 Gene3D G3DSA:3.30.70.1440 258 450 2.5E-168 T 13-10-2018 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 SUPERFAMILY SSF82714 309 394 2.22E-19 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 SUPERFAMILY SSF82693 262 441 6.8E-16 T 13-10-2018 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 PRINTS PR00702 Acriflavin resistance protein family signature 47 70 9.4E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 PRINTS PR00702 Acriflavin resistance protein family signature 150 167 9.4E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 PRINTS PR00702 Acriflavin resistance protein family signature 213 227 9.4E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 PRINTS PR00702 Acriflavin resistance protein family signature 72 95 9.4E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_18055 53ed4efa23a07d0d1da7103c62729aee 635 Gene3D G3DSA:3.30.70.1430 165 257 2.5E-168 T 13-10-2018 ambt_01585 765a72016d99354869094373859815ae 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 285 1.2E-45 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ambt_01585 765a72016d99354869094373859815ae 320 Gene3D G3DSA:3.40.50.720 41 312 1.2E-93 T 13-10-2018 ambt_01585 765a72016d99354869094373859815ae 320 Gene3D G3DSA:3.40.50.720 103 289 1.2E-93 T 13-10-2018 ambt_01585 765a72016d99354869094373859815ae 320 SUPERFAMILY SSF51735 105 286 3.45E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_13330 27618648b439db85b3db2719052afcf1 233 Gene3D G3DSA:3.90.550.10 1 226 1.8E-60 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_13330 27618648b439db85b3db2719052afcf1 233 Pfam PF02348 Cytidylyltransferase 3 136 8.4E-30 T 13-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 ambt_13330 27618648b439db85b3db2719052afcf1 233 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 225 1.4E-89 T 13-10-2018 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 ambt_13330 27618648b439db85b3db2719052afcf1 233 SUPERFAMILY SSF53448 3 225 4.9E-51 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_17180 a2b6e0d5ddc870db116e9f6020b97c7c 167 SUPERFAMILY SSF54523 6 134 2.51E-15 T 13-10-2018 ambt_17180 a2b6e0d5ddc870db116e9f6020b97c7c 167 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_17180 a2b6e0d5ddc870db116e9f6020b97c7c 167 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 1.2E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_17180 a2b6e0d5ddc870db116e9f6020b97c7c 167 Gene3D G3DSA:3.30.700.10 6 167 1.8E-13 T 13-10-2018 ambt_17180 a2b6e0d5ddc870db116e9f6020b97c7c 167 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 3.9E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_10160 0eb6635224ad0469e9011247a6a90b0b 238 Pfam PF00929 Exonuclease 4 167 1.2E-38 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_10160 0eb6635224ad0469e9011247a6a90b0b 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 215 1.1E-75 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_10160 0eb6635224ad0469e9011247a6a90b0b 238 SUPERFAMILY SSF53098 1 177 3.98E-56 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_10160 0eb6635224ad0469e9011247a6a90b0b 238 Gene3D G3DSA:3.20.20.140 198 238 5.5E-6 T 13-10-2018 ambt_10160 0eb6635224ad0469e9011247a6a90b0b 238 Gene3D G3DSA:3.30.420.10 1 183 6.4E-57 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_10160 0eb6635224ad0469e9011247a6a90b0b 238 SMART SM00479 2 176 7.7E-49 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_10160 0eb6635224ad0469e9011247a6a90b0b 238 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 232 4.3E-98 T 13-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_16245 9abaccee70b170fdadf3de9b4f43dbe4 345 Gene3D G3DSA:3.40.630.30 2 274 2.0E-119 T 13-10-2018 ambt_16245 9abaccee70b170fdadf3de9b4f43dbe4 345 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 340 8.5E-141 T 13-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ambt_16245 9abaccee70b170fdadf3de9b4f43dbe4 345 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 339 3.9E-145 T 13-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ambt_16245 9abaccee70b170fdadf3de9b4f43dbe4 345 SUPERFAMILY SSF55729 1 340 2.27E-136 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_16245 9abaccee70b170fdadf3de9b4f43dbe4 345 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 339 2.3E-145 T 13-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 ambt_16245 9abaccee70b170fdadf3de9b4f43dbe4 345 Gene3D G3DSA:2.40.40.20 276 342 2.1E-8 T 13-10-2018 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 SUPERFAMILY SSF52440 556 675 3.74E-49 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Gene3D G3DSA:3.40.50.20 1 116 2.4E-50 T 13-10-2018 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 SMART SM00851 955 1041 1.3E-27 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.8E-39 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 SUPERFAMILY SSF52440 1 127 1.87E-50 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Gene3D G3DSA:1.10.1030.10 404 553 2.0E-49 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 SMART SM01096 424 547 5.0E-73 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 SUPERFAMILY SSF52335 935 1069 2.22E-37 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 334 1.9E-70 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 6.4E-36 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Gene3D G3DSA:3.40.50.1380 936 1071 1.4E-36 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Pfam PF02142 MGS-like domain 956 1041 2.1E-16 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.379 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 SUPERFAMILY SSF56059 128 401 3.89E-106 T 13-10-2018 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 SUPERFAMILY SSF56059 673 932 1.15E-104 T 13-10-2018 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Gene3D G3DSA:3.30.470.20 119 403 3.0E-126 T 13-10-2018 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.086 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 SUPERFAMILY SSF48108 396 553 4.32E-51 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.0E-63 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 3.0E-63 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.0E-63 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.0E-63 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.0E-63 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.0E-63 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 3.0E-63 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Gene3D G3DSA:3.40.50.20 554 662 2.3E-49 T 13-10-2018 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11470 2c7d04d71af818ca93d19272d3082892 1071 Gene3D G3DSA:3.30.470.20 665 935 8.2E-123 T 13-10-2018 ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 Pfam PF00106 short chain dehydrogenase 32 104 1.1E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 119 301 2.9E-35 T 13-10-2018 ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 Gene3D G3DSA:3.40.50.720 25 306 6.3E-61 T 13-10-2018 ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 155 1.0E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 196 204 1.0E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 216 235 1.0E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 SUPERFAMILY SSF51735 32 304 7.14E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 236 253 6.3E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 32 49 6.3E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 235 6.3E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 268 288 6.3E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_10705 42a0328361bcae45bbcab5663a0577d3 310 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 206 6.3E-26 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06540 ad8cd57cbea00e12e5187d70cf9058e7 404 Gene3D G3DSA:2.40.110.10 134 248 7.6E-48 T 13-10-2018 ambt_06540 ad8cd57cbea00e12e5187d70cf9058e7 404 SUPERFAMILY SSF47203 246 400 5.8E-45 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ambt_06540 ad8cd57cbea00e12e5187d70cf9058e7 404 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 248 398 9.3E-39 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ambt_06540 ad8cd57cbea00e12e5187d70cf9058e7 404 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 131 1.9E-21 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ambt_06540 ad8cd57cbea00e12e5187d70cf9058e7 404 Gene3D G3DSA:1.20.140.10 249 403 5.2E-40 T 13-10-2018 ambt_06540 ad8cd57cbea00e12e5187d70cf9058e7 404 Gene3D G3DSA:1.10.540.10 1 133 1.2E-55 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ambt_06540 ad8cd57cbea00e12e5187d70cf9058e7 404 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 236 1.4E-18 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ambt_06540 ad8cd57cbea00e12e5187d70cf9058e7 404 SUPERFAMILY SSF56645 1 261 5.37E-74 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ambt_07935 8114eef2dcdc063fe8f30e412d9698e5 457 SUPERFAMILY SSF143548 16 158 3.66E-42 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ambt_07935 8114eef2dcdc063fe8f30e412d9698e5 457 Gene3D G3DSA:3.30.1330.90 10 160 6.1E-50 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ambt_07935 8114eef2dcdc063fe8f30e412d9698e5 457 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 454 3.8E-212 T 13-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ambt_07935 8114eef2dcdc063fe8f30e412d9698e5 457 Pfam PF03313 Serine dehydratase alpha chain 189 451 2.5E-101 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit ambt_07935 8114eef2dcdc063fe8f30e412d9698e5 457 Pfam PF03315 Serine dehydratase beta chain 3 156 4.2E-55 T 13-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ambt_03275 9e86abb62d5e4963faf3c093c428e69f 397 Gene3D G3DSA:2.40.420.20 298 367 9.3E-98 T 13-10-2018 ambt_03275 9e86abb62d5e4963faf3c093c428e69f 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 369 3.0E-80 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_03275 9e86abb62d5e4963faf3c093c428e69f 397 Gene3D G3DSA:2.40.50.100 60 204 9.3E-98 T 13-10-2018 ambt_03275 9e86abb62d5e4963faf3c093c428e69f 397 Gene3D G3DSA:2.40.30.170 49 297 9.3E-98 T 13-10-2018 ambt_03275 9e86abb62d5e4963faf3c093c428e69f 397 Gene3D G3DSA:1.10.287.470 95 168 9.3E-98 T 13-10-2018 ambt_03275 9e86abb62d5e4963faf3c093c428e69f 397 SUPERFAMILY SSF111369 49 292 3.53E-79 T 13-10-2018 ambt_03275 9e86abb62d5e4963faf3c093c428e69f 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 287 4.8E-16 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_18860 041bdb02e4be39e4f2702955ef9f16a1 468 Pfam PF01050 Mannose-6-phosphate isomerase 311 461 1.2E-73 T 13-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 ambt_18860 041bdb02e4be39e4f2702955ef9f16a1 468 Pfam PF00483 Nucleotidyl transferase 2 282 3.5E-74 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ambt_18860 041bdb02e4be39e4f2702955ef9f16a1 468 Gene3D G3DSA:2.60.120.10 342 455 2.7E-19 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_18860 041bdb02e4be39e4f2702955ef9f16a1 468 Gene3D G3DSA:3.90.550.10 1 341 1.6E-122 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18860 041bdb02e4be39e4f2702955ef9f16a1 468 SUPERFAMILY SSF53448 1 277 1.62E-73 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18860 041bdb02e4be39e4f2702955ef9f16a1 468 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1 465 4.1E-228 T 13-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 ambt_18860 041bdb02e4be39e4f2702955ef9f16a1 468 SUPERFAMILY SSF51182 181 465 3.28E-87 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 Pfam PF02817 e3 binding domain 206 239 1.1E-15 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 Gene3D G3DSA:4.10.320.10 202 244 3.1E-20 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 SUPERFAMILY SSF51230 1 95 5.23E-25 T 13-10-2018 IPR011053 Single hybrid motif ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 SUPERFAMILY SSF51230 105 197 7.33E-23 T 13-10-2018 IPR011053 Single hybrid motif ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 129 158 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 Gene3D G3DSA:3.30.559.10 263 495 7.7E-97 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 Gene3D G3DSA:2.40.50.100 1 99 2.1E-21 T 13-10-2018 ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 Gene3D G3DSA:2.40.50.100 100 201 5.4E-20 T 13-10-2018 ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 SUPERFAMILY SSF52777 265 494 1.65E-88 T 13-10-2018 ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 SUPERFAMILY SSF47005 200 243 1.19E-12 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 264 493 6.0E-81 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 106 495 4.1E-181 T 13-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 Pfam PF00364 Biotin-requiring enzyme 4 76 9.2E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment ambt_07580 46313e4ecaa611a1d3fc4207f37072c5 495 Pfam PF00364 Biotin-requiring enzyme 106 177 9.5E-18 T 13-10-2018 IPR000089 Biotin/lipoyl attachment ambt_09430 23c75ba81e2ea04a33c14c940e972118 536 Pfam PF00474 Sodium:solute symporter family 71 469 1.8E-90 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_09430 23c75ba81e2ea04a33c14c940e972118 536 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 71 469 2.6E-86 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_09430 23c75ba81e2ea04a33c14c940e972118 536 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 193 218 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site ambt_09430 23c75ba81e2ea04a33c14c940e972118 536 Gene3D G3DSA:1.20.1730.10 58 534 5.3E-82 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily ambt_09430 23c75ba81e2ea04a33c14c940e972118 536 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 42 530 2.7E-196 T 13-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 SUPERFAMILY SSF48179 211 508 1.16E-121 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 288 300 - T 13-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 PIRSF PIRSF000109 9 514 2.0E-184 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 SMART SM01350 213 506 3.6E-205 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 SUPERFAMILY SSF51735 14 181 4.34E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_05865 77016d898d6c8af2d577728fd9de6423 517 Gene3D G3DSA:1.10.1040.10 215 471 1.6E-105 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 15 181 3.0E-35 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 Gene3D G3DSA:1.20.5.320 472 506 6.4E-17 T 13-10-2018 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 Gene3D G3DSA:3.40.50.720 3 214 9.4E-45 T 13-10-2018 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 15 507 8.5E-181 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 284 311 1.8E-37 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 83 112 1.8E-37 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 14 37 1.8E-37 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 393 415 1.8E-37 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ambt_05865 77016d898d6c8af2d577728fd9de6423 517 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 213 505 3.8E-127 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 15 608 3.8E-253 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 SUPERFAMILY SSF52343 453 608 1.27E-49 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 SUPERFAMILY SSF63380 238 455 2.04E-63 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 557 565 6.2E-24 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 465 484 6.2E-24 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 395 402 6.2E-24 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 490 499 6.2E-24 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 503 514 6.2E-24 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 534 550 6.2E-24 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 279 289 6.2E-24 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 Gene3D G3DSA:3.40.50.80 454 608 3.6E-57 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 Pfam PF00258 Flavodoxin 73 202 8.8E-31 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 Pfam PF00667 FAD binding domain 241 433 1.5E-26 T 13-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 Gene3D G3DSA:2.40.30.10 241 448 3.0E-71 T 13-10-2018 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PIRSF PIRSF000207 1 608 3.2E-253 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PRINTS PR00369 Flavodoxin signature 72 85 3.3E-13 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PRINTS PR00369 Flavodoxin signature 176 195 3.3E-13 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PRINTS PR00369 Flavodoxin signature 120 131 3.3E-13 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 PRINTS PR00369 Flavodoxin signature 152 162 3.3E-13 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 Gene3D G3DSA:1.20.990.10 289 393 3.0E-71 T 13-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 Pfam PF00175 Oxidoreductase NAD-binding domain 466 572 4.8E-18 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 SUPERFAMILY SSF52218 70 216 4.74E-46 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_00745 7978fd4656b7e6513d2a8a280d32788d 608 Gene3D G3DSA:3.40.50.360 61 226 2.3E-49 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_09160 bd3423adf49d91fbb592f99818025bce 174 SUPERFAMILY SSF52218 4 170 1.0E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_09160 bd3423adf49d91fbb592f99818025bce 174 PIRSF PIRSF038996 1 172 1.3E-65 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 ambt_09160 bd3423adf49d91fbb592f99818025bce 174 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 ambt_09160 bd3423adf49d91fbb592f99818025bce 174 Pfam PF00258 Flavodoxin 6 160 3.2E-30 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ambt_09160 bd3423adf49d91fbb592f99818025bce 174 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 7.9E-70 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 ambt_09160 bd3423adf49d91fbb592f99818025bce 174 Gene3D G3DSA:3.40.50.360 3 174 1.8E-53 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_13860 7dfa19bd50e423381bfed0e8b27c236b 259 Pfam PF01061 ABC-2 type transporter 15 220 1.9E-16 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ambt_13860 7dfa19bd50e423381bfed0e8b27c236b 259 PIRSF PIRSF006648 2 255 2.6E-14 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_13860 7dfa19bd50e423381bfed0e8b27c236b 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 107 132 5.0E-14 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_13860 7dfa19bd50e423381bfed0e8b27c236b 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 178 197 5.0E-14 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_13860 7dfa19bd50e423381bfed0e8b27c236b 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 141 165 5.0E-14 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_13860 7dfa19bd50e423381bfed0e8b27c236b 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 198 217 5.0E-14 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_13860 7dfa19bd50e423381bfed0e8b27c236b 259 PRINTS PR00164 ABC-2 type transport system membrane protein signature 33 54 5.0E-14 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_10725 29234830498ef65317864c223c555dba 285 SUPERFAMILY SSF53697 95 261 1.67E-11 T 13-10-2018 ambt_10725 29234830498ef65317864c223c555dba 285 Gene3D G3DSA:3.40.50.10490 92 275 3.1E-22 T 13-10-2018 ambt_10725 29234830498ef65317864c223c555dba 285 Gene3D G3DSA:1.10.10.10 2 81 8.2E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_10725 29234830498ef65317864c223c555dba 285 Pfam PF01380 SIS domain 120 250 2.1E-8 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ambt_10725 29234830498ef65317864c223c555dba 285 SUPERFAMILY SSF46689 7 82 3.23E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_10725 29234830498ef65317864c223c555dba 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 75 3.0E-12 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 ambt_12700 02fbdf2fe6acb0ebc09f9d90cdfc78f8 437 Pfam PF12704 MacB-like periplasmic core domain 20 265 8.6E-15 T 13-10-2018 IPR025857 MacB-like periplasmic core domain ambt_12700 02fbdf2fe6acb0ebc09f9d90cdfc78f8 437 Pfam PF02687 FtsX-like permease family 341 430 1.2E-12 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 Pfam PF08264 Anticodon-binding domain of tRNA 707 830 1.4E-18 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 5 866 23.84 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 223 409 6.2E-75 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 Gene3D G3DSA:3.10.330.110 573 635 0.0 T 13-10-2018 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 866 0.0 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 Gene3D G3DSA:3.90.740.10 228 420 0.0 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 Gene3D G3DSA:1.10.730.10 9 798 0.0 T 13-10-2018 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 SUPERFAMILY SSF50677 227 421 5.02E-52 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 563 573 1.8E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 491 509 1.8E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 1.8E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 1.8E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 216 235 1.8E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 530 552 1.8E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 1.8E-52 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 Gene3D G3DSA:3.40.50.620 34 572 0.0 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 SUPERFAMILY SSF47323 669 866 1.44E-37 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 625 661 3.3E-6 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 423 578 1.3E-8 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 172 3.7E-28 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 SUPERFAMILY SSF52374 5 675 3.96E-145 T 13-10-2018 ambt_09515 1105aa597fa763d6db08addaeb7a0c9c 867 Gene3D G3DSA:3.10.20.590 806 866 4.2E-24 T 13-10-2018 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 Gene3D G3DSA:2.40.110.10 120 231 9.8E-40 T 13-10-2018 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 Gene3D G3DSA:1.20.140.10 232 383 7.9E-54 T 13-10-2018 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 Gene3D G3DSA:1.10.540.10 1 119 1.2E-34 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 2.4E-24 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 377 1.2E-46 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 SUPERFAMILY SSF56645 1 239 1.31E-76 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 PIRSF PIRSF016578 5 192 1.6E-12 T 13-10-2018 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 PIRSF PIRSF016578 207 383 4.9E-13 T 13-10-2018 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 SUPERFAMILY SSF47203 225 379 8.22E-59 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.3E-27 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ambt_07750 9297081c59be3abd1bba5510fe58ad4f 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ambt_21680 d580ba975dde7829c616dc176be07a9a 330 Gene3D G3DSA:1.10.10.60 6 63 8.0E-8 T 13-10-2018 ambt_21680 d580ba975dde7829c616dc176be07a9a 330 SUPERFAMILY SSF46689 59 108 1.34E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_21680 d580ba975dde7829c616dc176be07a9a 330 SMART SM00871 150 327 3.6E-21 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding ambt_21680 d580ba975dde7829c616dc176be07a9a 330 SMART SM00342 22 106 3.8E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_21680 d580ba975dde7829c616dc176be07a9a 330 Pfam PF12833 Helix-turn-helix domain 28 107 2.2E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_21680 d580ba975dde7829c616dc176be07a9a 330 SUPERFAMILY SSF46689 7 56 6.9E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_21680 d580ba975dde7829c616dc176be07a9a 330 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 102 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ambt_21680 d580ba975dde7829c616dc176be07a9a 330 SUPERFAMILY SSF55136 151 327 1.57E-20 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ambt_21680 d580ba975dde7829c616dc176be07a9a 330 Pfam PF06445 GyrI-like small molecule binding domain 151 326 2.6E-20 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain ambt_21680 d580ba975dde7829c616dc176be07a9a 330 Gene3D G3DSA:3.20.80.10 150 328 6.4E-27 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ambt_21680 d580ba975dde7829c616dc176be07a9a 330 Gene3D G3DSA:1.10.10.60 64 116 1.6E-11 T 13-10-2018 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 555 2.2E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 512 2.2E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 2.2E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 536 2.2E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 Gene3D G3DSA:1.20.120.160 1 145 3.3E-41 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 Gene3D G3DSA:3.30.565.10 374 557 1.7E-55 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 SMART SM00073 5 102 1.8E-30 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 SUPERFAMILY SSF55874 375 556 5.63E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 311 372 9.5E-16 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 Gene3D G3DSA:2.30.30.40 558 684 9.7E-38 T 13-10-2018 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 Gene3D G3DSA:2.40.50.180 581 644 9.7E-38 T 13-10-2018 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 SUPERFAMILY SSF47226 5 129 2.36E-31 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 SUPERFAMILY SSF50341 557 688 4.45E-29 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 Pfam PF01627 Hpt domain 10 100 2.2E-19 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 Gene3D G3DSA:1.10.287.560 310 373 3.5E-15 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 SMART SM00387 418 558 1.5E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 SMART SM01231 310 373 3.1E-19 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 Pfam PF01584 CheW-like domain 563 689 3.9E-21 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 SMART SM00260 550 689 1.9E-29 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 557 5.2E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_16745 d3209e0ab4dc35b31e90e5c249b87b91 702 SUPERFAMILY SSF47384 312 374 8.24E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 Gene3D G3DSA:2.30.30.40 598 725 1.0E-33 T 13-10-2018 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 SUPERFAMILY SSF47384 351 411 6.28E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 Gene3D G3DSA:1.20.120.160 2 138 1.0E-36 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 SUPERFAMILY SSF50341 597 729 4.19E-28 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 SUPERFAMILY SSF55874 413 596 5.76E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 595 1.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 1.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 PRINTS PR00344 Bacterial sensor protein C-terminal signature 558 576 1.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 552 1.4E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 Pfam PF01584 CheW-like domain 604 731 7.2E-23 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 Gene3D G3DSA:3.30.565.10 411 597 7.4E-57 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 SMART SM00073 6 103 1.7E-22 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 SMART SM01231 350 410 4.7E-18 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 458 597 9.3E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 Gene3D G3DSA:2.40.50.180 621 684 1.0E-33 T 13-10-2018 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 SMART SM00260 590 729 4.0E-33 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 Pfam PF01627 Hpt domain 8 100 8.8E-19 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 351 410 5.1E-14 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 Gene3D G3DSA:1.10.287.560 350 410 4.9E-19 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 SUPERFAMILY SSF47226 6 124 1.96E-31 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_13190 432aee6db31190eeb1f00ab8e8cc3acd 738 SMART SM00387 455 598 1.5E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 Pfam PF01019 Gamma-glutamyltranspeptidase 45 546 1.9E-160 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 Gene3D G3DSA:1.10.246.130 255 368 2.2E-33 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 Gene3D G3DSA:3.60.20.40 369 552 2.2E-61 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 32 543 4.6E-144 T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 52 77 1.0E-72 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 124 142 1.0E-72 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 410 1.0E-72 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 239 255 1.0E-72 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 142 161 1.0E-72 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 269 288 1.0E-72 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 457 474 1.0E-72 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 368 386 1.0E-72 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 433 448 1.0E-72 T 13-10-2018 ambt_15785 e9220e9d1e32150632e6e84690d912f0 557 SUPERFAMILY SSF56235 26 544 1.02E-164 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_12195 ba4e017b5b9dacad08e2cd45ceabd5bc 266 SMART SM00448 145 260 2.6E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12195 ba4e017b5b9dacad08e2cd45ceabd5bc 266 SMART SM00448 9 123 8.7E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12195 ba4e017b5b9dacad08e2cd45ceabd5bc 266 Gene3D G3DSA:3.40.50.2300 141 265 1.5E-30 T 13-10-2018 ambt_12195 ba4e017b5b9dacad08e2cd45ceabd5bc 266 Pfam PF00072 Response regulator receiver domain 11 123 3.6E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12195 ba4e017b5b9dacad08e2cd45ceabd5bc 266 Pfam PF00072 Response regulator receiver domain 147 260 9.9E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12195 ba4e017b5b9dacad08e2cd45ceabd5bc 266 SUPERFAMILY SSF52172 143 265 7.54E-30 T 13-10-2018 IPR011006 CheY-like superfamily ambt_12195 ba4e017b5b9dacad08e2cd45ceabd5bc 266 SUPERFAMILY SSF52172 7 129 5.27E-18 T 13-10-2018 IPR011006 CheY-like superfamily ambt_12195 ba4e017b5b9dacad08e2cd45ceabd5bc 266 Gene3D G3DSA:3.40.50.2300 1 127 4.7E-17 T 13-10-2018 ambt_06860 9cf2228531029490873852a82fbbbf8c 496 SUPERFAMILY SSF55781 154 306 5.67E-14 T 13-10-2018 ambt_06860 9cf2228531029490873852a82fbbbf8c 496 Gene3D G3DSA:3.30.70.270 312 486 1.4E-58 T 13-10-2018 ambt_06860 9cf2228531029490873852a82fbbbf8c 496 SUPERFAMILY SSF55073 328 488 2.67E-48 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_06860 9cf2228531029490873852a82fbbbf8c 496 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 484 5.0E-47 T 13-10-2018 IPR000160 GGDEF domain ambt_06860 9cf2228531029490873852a82fbbbf8c 496 SMART SM00267 312 488 1.3E-59 T 13-10-2018 IPR000160 GGDEF domain ambt_06860 9cf2228531029490873852a82fbbbf8c 496 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 319 487 3.3E-50 T 13-10-2018 IPR000160 GGDEF domain ambt_06860 9cf2228531029490873852a82fbbbf8c 496 Gene3D G3DSA:3.30.450.40 135 311 1.2E-18 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_09790 a03df3182cb4d8f30f63e54d5cc2fe9c 286 Pfam PF02567 Phenazine biosynthesis-like protein 8 258 9.4E-43 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ambt_09790 a03df3182cb4d8f30f63e54d5cc2fe9c 286 SUPERFAMILY SSF54506 1 276 5.93E-55 T 13-10-2018 ambt_09790 a03df3182cb4d8f30f63e54d5cc2fe9c 286 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 256 2.0E-43 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ambt_09790 a03df3182cb4d8f30f63e54d5cc2fe9c 286 Gene3D G3DSA:3.10.310.10 1 122 8.3E-27 T 13-10-2018 ambt_09790 a03df3182cb4d8f30f63e54d5cc2fe9c 286 PIRSF PIRSF016184 1 286 2.8E-55 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ambt_09790 a03df3182cb4d8f30f63e54d5cc2fe9c 286 Gene3D G3DSA:3.10.310.10 123 275 1.7E-33 T 13-10-2018 ambt_20560 4ed6cd9d3c682b2455abe54328d1af67 159 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 74 152 1.6E-33 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ambt_20560 4ed6cd9d3c682b2455abe54328d1af67 159 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 5 68 2.1E-4 T 13-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ambt_20560 4ed6cd9d3c682b2455abe54328d1af67 159 SUPERFAMILY SSF46767 71 152 7.46E-33 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ambt_20560 4ed6cd9d3c682b2455abe54328d1af67 159 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 122 128 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ambt_20560 4ed6cd9d3c682b2455abe54328d1af67 159 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 72 151 9.4E-38 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ambt_20560 4ed6cd9d3c682b2455abe54328d1af67 159 SUPERFAMILY SSF53155 5 76 3.73E-15 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ambt_20560 4ed6cd9d3c682b2455abe54328d1af67 159 Gene3D G3DSA:3.30.160.70 4 68 3.8E-10 T 13-10-2018 ambt_20560 4ed6cd9d3c682b2455abe54328d1af67 159 Gene3D G3DSA:1.10.10.10 71 155 1.7E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_20560 4ed6cd9d3c682b2455abe54328d1af67 159 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 152 39.987 T 13-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 ambt_11600 2ae447602eb47dd21e09299adaee6123 192 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 7.1E-9 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_11600 2ae447602eb47dd21e09299adaee6123 192 SUPERFAMILY SSF51161 2 184 5.13E-49 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_11600 2ae447602eb47dd21e09299adaee6123 192 SMART SM01266 4 58 1.9E-18 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 ambt_11600 2ae447602eb47dd21e09299adaee6123 192 Gene3D G3DSA:2.160.10.10 1 184 1.0E-66 T 13-10-2018 ambt_11600 2ae447602eb47dd21e09299adaee6123 192 Pfam PF12464 Maltose acetyltransferase 6 57 1.4E-13 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 ambt_09905 fa0cd7ea9121a63f97187aebb83bee98 152 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 107 152 2.0E-7 T 13-10-2018 ambt_09905 fa0cd7ea9121a63f97187aebb83bee98 152 Pfam PF04191 Phospholipid methyltransferase 43 140 3.6E-15 T 13-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 ambt_09905 fa0cd7ea9121a63f97187aebb83bee98 152 Gene3D G3DSA:1.20.120.1630 2 152 2.0E-26 T 13-10-2018 ambt_02350 3a4047f83b0b9b1138dcfe756475b0ae 413 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 6 401 8.8E-163 T 13-10-2018 IPR023874 DNA modification/repair radical SAM protein, putative ambt_02350 3a4047f83b0b9b1138dcfe756475b0ae 413 SUPERFAMILY SSF102114 50 202 2.35E-11 T 13-10-2018 ambt_02350 3a4047f83b0b9b1138dcfe756475b0ae 413 SUPERFAMILY SSF47781 305 384 4.11E-11 T 13-10-2018 IPR010994 RuvA domain 2-like ambt_02350 3a4047f83b0b9b1138dcfe756475b0ae 413 Gene3D G3DSA:3.20.20.70 56 192 5.0E-7 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_03230 0e044f7785ceb41172e3f13511fde7ec 248 Gene3D G3DSA:2.40.50.40 142 210 3.7E-11 T 13-10-2018 ambt_03230 0e044f7785ceb41172e3f13511fde7ec 248 Pfam PF04397 LytTr DNA-binding domain 153 245 1.2E-22 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ambt_03230 0e044f7785ceb41172e3f13511fde7ec 248 SMART SM00448 10 118 1.7E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_03230 0e044f7785ceb41172e3f13511fde7ec 248 SMART SM00850 150 247 1.3E-28 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ambt_03230 0e044f7785ceb41172e3f13511fde7ec 248 Gene3D G3DSA:3.40.50.2300 2 132 1.3E-25 T 13-10-2018 ambt_03230 0e044f7785ceb41172e3f13511fde7ec 248 SUPERFAMILY SSF52172 9 122 6.55E-26 T 13-10-2018 IPR011006 CheY-like superfamily ambt_03230 0e044f7785ceb41172e3f13511fde7ec 248 Pfam PF00072 Response regulator receiver domain 13 117 1.0E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_10875 9d99f779caa9ed6ba574bb08e2a3c746 648 Pfam PF13424 Tetratricopeptide repeat 220 287 3.1E-9 T 13-10-2018 ambt_10875 9d99f779caa9ed6ba574bb08e2a3c746 648 SMART SM00028 296 329 400.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_10875 9d99f779caa9ed6ba574bb08e2a3c746 648 SMART SM00028 256 289 0.0026 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_10875 9d99f779caa9ed6ba574bb08e2a3c746 648 Gene3D G3DSA:3.30.70.270 478 648 6.5E-40 T 13-10-2018 ambt_10875 9d99f779caa9ed6ba574bb08e2a3c746 648 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 487 647 2.6E-34 T 13-10-2018 IPR000160 GGDEF domain ambt_10875 9d99f779caa9ed6ba574bb08e2a3c746 648 Gene3D G3DSA:1.25.40.10 258 408 1.5E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_10875 9d99f779caa9ed6ba574bb08e2a3c746 648 Gene3D G3DSA:1.25.40.10 49 257 9.1E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_10875 9d99f779caa9ed6ba574bb08e2a3c746 648 SUPERFAMILY SSF48452 173 331 1.84E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_10875 9d99f779caa9ed6ba574bb08e2a3c746 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 490 644 6.7E-32 T 13-10-2018 IPR000160 GGDEF domain ambt_10875 9d99f779caa9ed6ba574bb08e2a3c746 648 SMART SM00267 479 648 2.7E-36 T 13-10-2018 IPR000160 GGDEF domain ambt_10875 9d99f779caa9ed6ba574bb08e2a3c746 648 SUPERFAMILY SSF55073 497 647 4.16E-34 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 SUPERFAMILY SSF46689 381 468 7.17E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 Pfam PF02954 Bacterial regulatory protein, Fis family 429 466 9.9E-15 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 Gene3D G3DSA:3.40.50.300 126 312 1.5E-66 T 13-10-2018 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 SUPERFAMILY SSF52172 1 186 6.55E-40 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 6.6E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 6.6E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 SMART SM00448 4 116 4.2E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 Gene3D G3DSA:1.10.8.60 313 384 1.8E-21 T 13-10-2018 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 6.5E-227 T 13-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 SUPERFAMILY SSF52540 140 384 3.73E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 Pfam PF00072 Response regulator receiver domain 6 114 1.4E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 SMART SM00382 161 304 2.5E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 Gene3D G3DSA:1.10.10.60 385 469 6.0E-23 T 13-10-2018 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 Pfam PF00158 Sigma-54 interaction domain 141 307 9.7E-71 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ambt_01470 774307fcd0a9399ec6ddf012e3465b1a 469 Gene3D G3DSA:3.40.50.2300 1 125 1.1E-35 T 13-10-2018 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 SUPERFAMILY SSF52833 10 119 1.18E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 ProSitePatterns PS00194 Thioredoxin family active site. 34 52 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 Gene3D G3DSA:1.25.40.10 119 203 1.0E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 Gene3D G3DSA:3.40.30.10 6 118 2.5E-32 T 13-10-2018 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 SUPERFAMILY SSF48452 132 252 1.0E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 Pfam PF00085 Thioredoxin 13 115 6.3E-27 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 Pfam PF14561 Tetratricopeptide repeat 202 289 5.8E-25 T 13-10-2018 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 TIGRFAM TIGR01068 thioredoxin: thioredoxin 17 115 9.2E-31 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 Gene3D G3DSA:1.25.40.10 204 289 1.6E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 PRINTS PR00421 Thioredoxin family signature 81 92 2.1E-5 T 13-10-2018 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 PRINTS PR00421 Thioredoxin family signature 41 50 2.1E-5 T 13-10-2018 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 PRINTS PR00421 Thioredoxin family signature 33 41 2.1E-5 T 13-10-2018 ambt_15815 96f3a6e3c3bef55a3428f298d7297ab7 289 Pfam PF14559 Tetratricopeptide repeat 131 195 1.9E-13 T 13-10-2018 ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 PIRSF PIRSF002560 1 157 2.6E-64 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 Pfam PF00210 Ferritin-like domain 9 137 1.4E-33 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 5.2E-67 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 SUPERFAMILY SSF47240 1 153 1.23E-46 T 13-10-2018 IPR009078 Ferritin-like superfamily ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 Gene3D G3DSA:1.20.1260.10 1 157 2.2E-61 T 13-10-2018 IPR012347 Ferritin-like ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.8E-59 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.8E-59 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.8E-59 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.8E-59 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.8E-59 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.8E-59 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08215 a2b3e45cfdac538ba0c9faa3fa6bfd86 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.8E-59 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 Gene3D G3DSA:3.30.70.100 31 114 4.5E-18 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 Gene3D G3DSA:3.40.50.1000 448 718 4.9E-93 T 13-10-2018 IPR023214 HAD superfamily ambt_07265 920730383fb74049c2d8613b75e64d9d 783 Gene3D G3DSA:2.70.150.20 253 369 4.4E-42 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 SUPERFAMILY SSF81665 235 754 3.01E-11 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 198 775 8.7E-188 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 SUPERFAMILY SSF81653 269 365 7.85E-28 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 Pfam PF00403 Heavy-metal-associated domain 46 103 7.3E-15 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 238 743 5.7E-89 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 Pfam PF00122 E1-E2 ATPase 266 446 9.2E-56 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 591 602 1.7E-28 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 315 329 1.7E-28 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 613 623 1.7E-28 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 467 481 1.7E-28 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 666 685 1.7E-28 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 689 701 1.7E-28 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 179 776 6.7E-187 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 Gene3D G3DSA:3.40.1110.10 478 598 4.9E-93 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 Pfam PF00702 haloacid dehalogenase-like hydrolase 463 680 2.7E-40 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 469 475 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 SUPERFAMILY SSF55008 39 110 4.06E-18 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 SUPERFAMILY SSF56784 467 772 1.65E-55 T 13-10-2018 IPR036412 HAD-like superfamily ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00943 Copper-transporting ATPase signature 255 273 1.4E-10 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00943 Copper-transporting ATPase signature 388 402 1.4E-10 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00943 Copper-transporting ATPase signature 643 660 1.4E-10 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00943 Copper-transporting ATPase signature 84 104 1.4E-10 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00943 Copper-transporting ATPase signature 183 202 1.4E-10 T 13-10-2018 ambt_07265 920730383fb74049c2d8613b75e64d9d 783 PRINTS PR00943 Copper-transporting ATPase signature 450 465 1.4E-10 T 13-10-2018 ambt_06065 d78bd711b38c344374720258b8cc2adf 719 Gene3D G3DSA:3.40.50.300 181 420 5.7E-59 T 13-10-2018 ambt_06065 d78bd711b38c344374720258b8cc2adf 719 Pfam PF13245 AAA domain 229 379 1.9E-28 T 13-10-2018 ambt_06065 d78bd711b38c344374720258b8cc2adf 719 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 157 709 5.3E-128 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 ambt_06065 d78bd711b38c344374720258b8cc2adf 719 SUPERFAMILY SSF52540 223 691 3.28E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_06065 d78bd711b38c344374720258b8cc2adf 719 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 20 709 50.591 T 13-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 ambt_06065 d78bd711b38c344374720258b8cc2adf 719 Pfam PF13538 UvrD-like helicase C-terminal domain 636 686 1.3E-12 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain ambt_06065 d78bd711b38c344374720258b8cc2adf 719 Gene3D G3DSA:3.40.50.300 450 579 1.9E-9 T 13-10-2018 ambt_06065 d78bd711b38c344374720258b8cc2adf 719 Gene3D G3DSA:3.40.50.300 580 700 1.4E-21 T 13-10-2018 ambt_02355 1653fae4a2a96dacc987ce35878a440e 256 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 4 232 9.6E-63 T 13-10-2018 IPR023875 DNA metabolism protein, putative ambt_02355 1653fae4a2a96dacc987ce35878a440e 256 Pfam PF13566 Domain of unknown function (DUF4130 74 231 6.4E-37 T 13-10-2018 IPR025404 Domain of unknown function DUF4130 ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 Pfam PF01476 LysM domain 506 548 4.5E-14 T 13-10-2018 IPR018392 LysM domain ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 Pfam PF01476 LysM domain 370 412 8.3E-12 T 13-10-2018 IPR018392 LysM domain ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 Pfam PF01476 LysM domain 444 486 1.6E-13 T 13-10-2018 IPR018392 LysM domain ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 Gene3D G3DSA:3.10.350.10 501 551 5.2E-16 T 13-10-2018 IPR036779 LysM domain superfamily ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 Gene3D G3DSA:3.10.350.10 439 495 8.6E-17 T 13-10-2018 IPR036779 LysM domain superfamily ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 SUPERFAMILY SSF53955 137 287 4.5E-43 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 SUPERFAMILY SSF54106 442 487 6.8E-12 T 13-10-2018 ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 SUPERFAMILY SSF54106 504 548 6.41E-11 T 13-10-2018 ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 SMART SM00257 369 412 3.4E-14 T 13-10-2018 IPR018392 LysM domain ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 SMART SM00257 443 487 8.7E-16 T 13-10-2018 IPR018392 LysM domain ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 SMART SM00257 505 549 6.4E-15 T 13-10-2018 IPR018392 LysM domain ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 Pfam PF01464 Transglycosylase SLT domain 148 251 2.0E-23 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 158 186 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 Gene3D G3DSA:1.10.530.10 134 287 3.6E-31 T 13-10-2018 ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 SUPERFAMILY SSF54106 367 412 1.57E-10 T 13-10-2018 ambt_05210 fcc56f796cde8c47a3701b5b683e3ee2 559 Gene3D G3DSA:3.10.350.10 360 420 2.1E-14 T 13-10-2018 IPR036779 LysM domain superfamily ambt_21340 06bd3c8086638fa316c9e47dabdd7014 365 Pfam PF11017 Protein of unknown function (DUF2855) 43 354 1.8E-99 T 13-10-2018 IPR021276 Protein of unknown function DUF2855 ambt_21340 06bd3c8086638fa316c9e47dabdd7014 365 SUPERFAMILY SSF50129 23 123 7.25E-7 T 13-10-2018 IPR011032 GroES-like superfamily ambt_21340 06bd3c8086638fa316c9e47dabdd7014 365 Gene3D G3DSA:3.40.50.720 166 329 4.8E-6 T 13-10-2018 ambt_21340 06bd3c8086638fa316c9e47dabdd7014 365 Gene3D G3DSA:3.90.180.10 2 130 1.7E-5 T 13-10-2018 ambt_12455 954b567f32dcc98a28748ccb6083bc20 560 Gene3D G3DSA:3.50.30.30 118 307 3.9E-51 T 13-10-2018 ambt_12455 954b567f32dcc98a28748ccb6083bc20 560 Gene3D G3DSA:3.40.630.10 74 517 3.9E-51 T 13-10-2018 ambt_12455 954b567f32dcc98a28748ccb6083bc20 560 Pfam PF02225 PA domain 152 245 4.3E-7 T 13-10-2018 IPR003137 PA domain ambt_12455 954b567f32dcc98a28748ccb6083bc20 560 Pfam PF04389 Peptidase family M28 317 531 9.0E-45 T 13-10-2018 IPR007484 Peptidase M28 ambt_12455 954b567f32dcc98a28748ccb6083bc20 560 SUPERFAMILY SSF53187 52 546 2.37E-64 T 13-10-2018 ambt_12455 954b567f32dcc98a28748ccb6083bc20 560 SUPERFAMILY SSF52025 150 256 2.33E-6 T 13-10-2018 ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 Gene3D G3DSA:3.30.450.20 476 599 8.5E-30 T 13-10-2018 ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 Gene3D G3DSA:3.30.450.20 13 160 5.9E-18 T 13-10-2018 ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 598 762 1.8E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 SMART SM00267 591 763 2.4E-62 T 13-10-2018 IPR000160 GGDEF domain ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 Gene3D G3DSA:3.20.20.450 776 1026 2.9E-84 T 13-10-2018 IPR035919 EAL domain superfamily ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 Gene3D G3DSA:3.30.70.270 600 775 9.5E-59 T 13-10-2018 ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 481 597 1.7E-16 T 13-10-2018 IPR000014 PAS domain ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 351 476 6.1E-22 T 13-10-2018 IPR000014 PAS domain ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 Pfam PF00563 EAL domain 779 1014 2.2E-65 T 13-10-2018 IPR001633 EAL domain ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 SMART SM00052 773 1019 2.3E-93 T 13-10-2018 IPR001633 EAL domain ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 SUPERFAMILY SSF55785 485 588 1.1E-25 T 13-10-2018 IPR035965 PAS domain superfamily ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 SMART SM00091 354 421 1.5E-7 T 13-10-2018 IPR000014 PAS domain ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 SMART SM00091 477 543 1.2E-5 T 13-10-2018 IPR000014 PAS domain ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 SUPERFAMILY SSF55073 607 764 1.49E-48 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 SMART SM00086 549 591 0.0079 T 13-10-2018 IPR001610 PAC motif ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 SMART SM00086 427 469 3.1 T 13-10-2018 IPR001610 PAC motif ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 Pfam PF00989 PAS fold 360 466 4.2E-13 T 13-10-2018 IPR013767 PAS fold GO:0006355 ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 SUPERFAMILY SSF55785 345 467 2.27E-19 T 13-10-2018 IPR035965 PAS domain superfamily ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 Pfam PF00990 Diguanylate cyclase, GGDEF domain 602 758 5.8E-49 T 13-10-2018 IPR000160 GGDEF domain ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 SUPERFAMILY SSF141868 779 1028 8.89E-80 T 13-10-2018 IPR035919 EAL domain superfamily ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 Pfam PF02743 Cache domain 22 210 2.3E-13 T 13-10-2018 IPR033479 Double Cache domain 1 ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 Pfam PF13426 PAS domain 488 590 2.2E-15 T 13-10-2018 IPR000014 PAS domain ambt_12805 0fa2e1e7f1ae0607a72cf86a3d3e75b5 1045 Gene3D G3DSA:3.30.450.20 364 475 1.1E-21 T 13-10-2018 ambt_00280 b691f79a456fa938a061bd9c59699980 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_00280 b691f79a456fa938a061bd9c59699980 217 SUPERFAMILY SSF46894 138 209 3.33E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_00280 b691f79a456fa938a061bd9c59699980 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 1.3E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_00280 b691f79a456fa938a061bd9c59699980 217 SMART SM00448 2 115 4.3E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_00280 b691f79a456fa938a061bd9c59699980 217 SUPERFAMILY SSF52172 1 130 5.83E-24 T 13-10-2018 IPR011006 CheY-like superfamily ambt_00280 b691f79a456fa938a061bd9c59699980 217 Gene3D G3DSA:3.40.50.12740 3 209 3.6E-47 T 13-10-2018 ambt_00280 b691f79a456fa938a061bd9c59699980 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.4E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_00280 b691f79a456fa938a061bd9c59699980 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.4E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_00280 b691f79a456fa938a061bd9c59699980 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.4E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_00280 b691f79a456fa938a061bd9c59699980 217 Pfam PF00072 Response regulator receiver domain 5 115 1.5E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_00280 b691f79a456fa938a061bd9c59699980 217 SMART SM00421 147 204 3.2E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_03450 8f075c88ee45935024eca772217981f9 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 209 42.564 T 13-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ambt_03450 8f075c88ee45935024eca772217981f9 209 SUPERFAMILY SSF53271 3 207 2.88E-64 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like ambt_03450 8f075c88ee45935024eca772217981f9 209 Pfam PF14681 Uracil phosphoribosyltransferase 7 208 3.6E-66 T 13-10-2018 ambt_03450 8f075c88ee45935024eca772217981f9 209 Gene3D G3DSA:3.40.50.2020 1 209 1.3E-71 T 13-10-2018 ambt_03450 8f075c88ee45935024eca772217981f9 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 1.6E-84 T 13-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ambt_18000 2f83079bd8393b9dac3daf14d0a88354 302 Gene3D G3DSA:3.40.190.10 172 270 7.7E-69 T 13-10-2018 ambt_18000 2f83079bd8393b9dac3daf14d0a88354 302 SUPERFAMILY SSF53850 91 297 5.97E-44 T 13-10-2018 ambt_18000 2f83079bd8393b9dac3daf14d0a88354 302 SUPERFAMILY SSF46785 6 86 5.78E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_18000 2f83079bd8393b9dac3daf14d0a88354 302 Gene3D G3DSA:3.40.190.10 93 294 7.7E-69 T 13-10-2018 ambt_18000 2f83079bd8393b9dac3daf14d0a88354 302 Gene3D G3DSA:1.10.10.10 1 88 6.4E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_18000 2f83079bd8393b9dac3daf14d0a88354 302 Pfam PF03466 LysR substrate binding domain 99 286 2.5E-22 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_18000 2f83079bd8393b9dac3daf14d0a88354 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 9.9E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_18000 2f83079bd8393b9dac3daf14d0a88354 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 9.9E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_18000 2f83079bd8393b9dac3daf14d0a88354 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 9.9E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_18000 2f83079bd8393b9dac3daf14d0a88354 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 6.1E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_08490 b8fe12471bf5788ed3029171b16a978c 389 SMART SM00028 216 249 14.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_08490 b8fe12471bf5788ed3029171b16a978c 389 SMART SM00028 282 315 120.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_08490 b8fe12471bf5788ed3029171b16a978c 389 SMART SM00028 69 102 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_08490 b8fe12471bf5788ed3029171b16a978c 389 SMART SM00028 107 140 210.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_08490 b8fe12471bf5788ed3029171b16a978c 389 Gene3D G3DSA:1.25.40.10 20 349 7.3E-33 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_08490 b8fe12471bf5788ed3029171b16a978c 389 SUPERFAMILY SSF48452 119 325 2.37E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_08490 b8fe12471bf5788ed3029171b16a978c 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 34.683 T 13-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 ambt_08490 b8fe12471bf5788ed3029171b16a978c 389 Pfam PF13432 Tetratricopeptide repeat 201 242 0.011 T 13-10-2018 ambt_08490 b8fe12471bf5788ed3029171b16a978c 389 SUPERFAMILY SSF48452 37 185 2.73E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 Gene3D G3DSA:2.60.40.420 181 388 2.6E-38 T 13-10-2018 IPR008972 Cupredoxin ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 SUPERFAMILY SSF49503 180 383 7.53E-50 T 13-10-2018 IPR008972 Cupredoxin ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 Pfam PF00394 Multicopper oxidase 183 348 1.5E-29 T 13-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 ProSitePatterns PS00080 Multicopper oxidases signature 2. 584 595 - T 13-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 SUPERFAMILY SSF49503 60 203 1.21E-35 T 13-10-2018 IPR008972 Cupredoxin ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 Pfam PF07732 Multicopper oxidase 65 174 3.8E-35 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 SUPERFAMILY SSF49503 445 601 2.33E-36 T 13-10-2018 IPR008972 Cupredoxin ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 4 601 1.4E-232 T 13-10-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 Gene3D G3DSA:2.60.40.420 36 173 1.1E-35 T 13-10-2018 IPR008972 Cupredoxin ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 Pfam PF07731 Multicopper oxidase 486 599 3.1E-26 T 13-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 Gene3D G3DSA:2.60.40.420 470 602 3.9E-32 T 13-10-2018 IPR008972 Cupredoxin ambt_07320 cfeff8a644e21fd9a948fdb9b5e9db37 602 ProSitePatterns PS00079 Multicopper oxidases signature 1. 579 599 - T 13-10-2018 IPR033138 Multicopper oxidases, conserved site ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 SUPERFAMILY SSF64153 13 253 3.01E-57 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 240 498 3.4E-67 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 PIRSF PIRSF017184 12 499 4.3E-130 T 13-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 Gene3D G3DSA:3.40.50.10260 10 222 7.5E-57 T 13-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 Pfam PF03853 YjeF-related protein N-terminus 37 196 1.5E-38 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 231 498 22.51 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 Gene3D G3DSA:3.40.1190.20 233 499 9.2E-85 T 13-10-2018 IPR029056 Ribokinase-like ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 Pfam PF01256 Carbohydrate kinase 255 492 3.1E-57 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 437 447 - T 13-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 SUPERFAMILY SSF53613 239 498 1.54E-71 T 13-10-2018 IPR029056 Ribokinase-like ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 17 216 5.8E-42 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ambt_19885 c4a33b6ca2a53b69b3cb425c825c70cc 499 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 16 217 22.298 T 13-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ambt_13065 ff212d21dd54dcb4fc3ea44124a7dd51 599 SUPERFAMILY SSF51230 526 598 3.4E-20 T 13-10-2018 IPR011053 Single hybrid motif ambt_13065 ff212d21dd54dcb4fc3ea44124a7dd51 599 Pfam PF00682 HMGL-like 6 270 2.4E-49 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ambt_13065 ff212d21dd54dcb4fc3ea44124a7dd51 599 Pfam PF00364 Biotin-requiring enzyme 533 597 5.9E-17 T 13-10-2018 IPR000089 Biotin/lipoyl attachment ambt_13065 ff212d21dd54dcb4fc3ea44124a7dd51 599 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 593 5.3E-258 T 13-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 ambt_13065 ff212d21dd54dcb4fc3ea44124a7dd51 599 Gene3D G3DSA:2.40.50.100 522 598 1.8E-22 T 13-10-2018 ambt_13065 ff212d21dd54dcb4fc3ea44124a7dd51 599 SUPERFAMILY SSF89000 297 457 3.57E-50 T 13-10-2018 ambt_13065 ff212d21dd54dcb4fc3ea44124a7dd51 599 Gene3D G3DSA:3.20.20.70 1 461 2.9E-163 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_13065 ff212d21dd54dcb4fc3ea44124a7dd51 599 Pfam PF02436 Conserved carboxylase domain 292 498 3.6E-58 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 ambt_13065 ff212d21dd54dcb4fc3ea44124a7dd51 599 SUPERFAMILY SSF51569 1 300 6.41E-85 T 13-10-2018 ambt_13065 ff212d21dd54dcb4fc3ea44124a7dd51 599 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 555 572 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ambt_06960 caba678d1e6012ee7e5b23ef70184a53 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 91 1.8E-8 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ambt_06960 caba678d1e6012ee7e5b23ef70184a53 96 Gene3D G3DSA:3.30.2310.20 1 95 3.6E-18 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ambt_19675 d26135b4e775a1137012da6756eb7583 613 Gene3D G3DSA:1.20.1560.10 9 339 3.5E-29 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_19675 d26135b4e775a1137012da6756eb7583 613 Gene3D G3DSA:3.40.50.300 354 606 3.8E-97 T 13-10-2018 ambt_19675 d26135b4e775a1137012da6756eb7583 613 SUPERFAMILY SSF52540 351 605 5.74E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19675 d26135b4e775a1137012da6756eb7583 613 Pfam PF00005 ABC transporter 383 535 3.8E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_19675 d26135b4e775a1137012da6756eb7583 613 Pfam PF00664 ABC transporter transmembrane region 44 309 1.8E-22 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ambt_19675 d26135b4e775a1137012da6756eb7583 613 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_19675 d26135b4e775a1137012da6756eb7583 613 SUPERFAMILY SSF90123 31 342 7.19E-54 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_19675 d26135b4e775a1137012da6756eb7583 613 SMART SM00382 390 581 2.4E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_19375 652c4b99292193e1e658c128d22e38fd 413 SMART SM01274 17 150 4.4E-74 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ambt_19375 652c4b99292193e1e658c128d22e38fd 413 SUPERFAMILY SSF53223 9 160 7.91E-52 T 13-10-2018 ambt_19375 652c4b99292193e1e658c128d22e38fd 413 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 ambt_19375 652c4b99292193e1e658c128d22e38fd 413 PIRSF PIRSF000106 37 413 2.6E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ambt_19375 652c4b99292193e1e658c128d22e38fd 413 Pfam PF00390 Malic enzyme, N-terminal domain 30 149 5.0E-26 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ambt_19375 652c4b99292193e1e658c128d22e38fd 413 SMART SM00919 162 398 6.7E-137 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ambt_19375 652c4b99292193e1e658c128d22e38fd 413 Gene3D G3DSA:3.40.50.10380 1 159 1.3E-67 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 ambt_19375 652c4b99292193e1e658c128d22e38fd 413 Pfam PF03949 Malic enzyme, NAD binding domain 164 355 5.7E-25 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ambt_19375 652c4b99292193e1e658c128d22e38fd 413 Gene3D G3DSA:3.40.50.720 160 413 1.2E-82 T 13-10-2018 ambt_19375 652c4b99292193e1e658c128d22e38fd 413 SUPERFAMILY SSF51735 162 409 4.7E-81 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_06585 5956662cc03625b5f4d6c2cff9b23a5c 599 SUPERFAMILY SSF56645 17 291 1.96E-58 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ambt_06585 5956662cc03625b5f4d6c2cff9b23a5c 599 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 2.4E-16 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ambt_06585 5956662cc03625b5f4d6c2cff9b23a5c 599 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 6.9E-6 T 13-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ambt_06585 5956662cc03625b5f4d6c2cff9b23a5c 599 Gene3D G3DSA:1.10.540.10 9 159 1.3E-18 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ambt_06585 5956662cc03625b5f4d6c2cff9b23a5c 599 Gene3D G3DSA:2.40.110.10 160 286 1.2E-28 T 13-10-2018 ambt_06585 5956662cc03625b5f4d6c2cff9b23a5c 599 Gene3D G3DSA:1.20.140.10 287 460 1.8E-41 T 13-10-2018 ambt_06585 5956662cc03625b5f4d6c2cff9b23a5c 599 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 157 3.1E-14 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ambt_06585 5956662cc03625b5f4d6c2cff9b23a5c 599 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 466 592 2.6E-34 T 13-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ambt_06585 5956662cc03625b5f4d6c2cff9b23a5c 599 SUPERFAMILY SSF47203 286 474 4.35E-46 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ambt_06585 5956662cc03625b5f4d6c2cff9b23a5c 599 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 449 9.0E-18 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 553 38.898 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 444 3.7E-49 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 Gene3D G3DSA:3.30.930.10 11 450 6.2E-218 T 13-10-2018 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 SUPERFAMILY SSF55826 218 370 2.49E-14 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 4.3E-20 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 4.3E-20 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 4.3E-20 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 4.3E-20 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 SUPERFAMILY SSF55681 10 463 1.72E-107 T 13-10-2018 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 Pfam PF03129 Anticodon binding domain 460 552 4.2E-20 T 13-10-2018 IPR004154 Anticodon-binding ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 Gene3D G3DSA:3.40.50.800 4 539 6.2E-218 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 Pfam PF04073 Aminoacyl-tRNA editing domain 267 364 3.8E-10 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 SUPERFAMILY SSF52954 448 553 1.04E-30 T 13-10-2018 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 Gene3D G3DSA:3.90.960.10 240 374 6.2E-218 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ambt_04035 1bfa0327e07396402604341f3ba3e41a 554 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 550 9.7E-227 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ambt_02080 e75db3d57e4d5d9f138017f49e2ed459 280 Pfam PF00924 Mechanosensitive ion channel 69 265 1.8E-56 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ambt_02080 e75db3d57e4d5d9f138017f49e2ed459 280 SUPERFAMILY SSF50182 110 176 4.9E-17 T 13-10-2018 IPR010920 LSM domain superfamily ambt_02080 e75db3d57e4d5d9f138017f49e2ed459 280 SUPERFAMILY SSF82861 25 109 1.83E-17 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ambt_02080 e75db3d57e4d5d9f138017f49e2ed459 280 SUPERFAMILY SSF82689 179 276 3.92E-35 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ambt_02080 e75db3d57e4d5d9f138017f49e2ed459 280 Gene3D G3DSA:2.30.30.60 126 175 5.0E-21 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ambt_02080 e75db3d57e4d5d9f138017f49e2ed459 280 Gene3D G3DSA:3.30.70.100 176 270 7.3E-30 T 13-10-2018 ambt_01735 3bfdb31e2462fb8e6ab5742a4bc6610d 244 SUPERFAMILY SSF48008 100 236 1.02E-27 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_01735 3bfdb31e2462fb8e6ab5742a4bc6610d 244 SUPERFAMILY SSF46785 30 124 1.94E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_01735 3bfdb31e2462fb8e6ab5742a4bc6610d 244 Gene3D G3DSA:1.10.10.10 16 92 3.7E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_01735 3bfdb31e2462fb8e6ab5742a4bc6610d 244 SMART SM00345 37 95 1.5E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_01735 3bfdb31e2462fb8e6ab5742a4bc6610d 244 Pfam PF07729 FCD domain 105 228 2.6E-25 T 13-10-2018 IPR011711 GntR, C-terminal ambt_01735 3bfdb31e2462fb8e6ab5742a4bc6610d 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 37 95 3.7E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_01735 3bfdb31e2462fb8e6ab5742a4bc6610d 244 Gene3D G3DSA:1.20.120.530 93 241 1.4E-29 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_01735 3bfdb31e2462fb8e6ab5742a4bc6610d 244 SMART SM00895 105 230 1.6E-23 T 13-10-2018 IPR011711 GntR, C-terminal ambt_16650 a617af9da9e47e044798b439157b0fad 537 Gene3D G3DSA:2.60.120.200 309 537 3.8E-90 T 13-10-2018 ambt_16650 a617af9da9e47e044798b439157b0fad 537 Gene3D G3DSA:2.60.120.260 163 297 3.1E-24 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_16650 a617af9da9e47e044798b439157b0fad 537 Gene3D G3DSA:2.60.120.260 32 150 6.7E-17 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_16650 a617af9da9e47e044798b439157b0fad 537 SUPERFAMILY SSF49785 165 297 6.68E-17 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_16650 a617af9da9e47e044798b439157b0fad 537 SUPERFAMILY SSF49899 317 535 2.43E-72 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ambt_16650 a617af9da9e47e044798b439157b0fad 537 Pfam PF08787 Alginate lyase 331 502 9.6E-17 T 13-10-2018 IPR014895 Alginate lyase 2 ambt_16650 a617af9da9e47e044798b439157b0fad 537 SUPERFAMILY SSF49785 33 145 4.76E-6 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_16650 a617af9da9e47e044798b439157b0fad 537 Pfam PF00754 F5/8 type C domain 172 291 9.3E-13 T 13-10-2018 IPR000421 Coagulation factor 5/8 C-terminal domain ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 Gene3D G3DSA:1.10.8.70 315 368 9.1E-6 T 13-10-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 463 1.1E-189 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.3E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.3E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.3E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 178 188 1.3E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 202 1.3E-26 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 304 7.3E-113 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 SUPERFAMILY SSF48163 298 460 1.09E-43 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 Gene3D G3DSA:3.40.50.620 1 313 3.0E-136 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 460 32.328 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 Gene3D G3DSA:1.10.10.350 369 468 3.3E-22 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ambt_11755 a32e203861f9c50dc227877f4c7577c8 469 SUPERFAMILY SSF52374 3 297 8.31E-115 T 13-10-2018 ambt_20415 d2d1b05754e9b57867d37efa45431a58 294 Pfam PF03466 LysR substrate binding domain 90 291 1.2E-33 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_20415 d2d1b05754e9b57867d37efa45431a58 294 Gene3D G3DSA:1.10.10.10 4 92 1.2E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_20415 d2d1b05754e9b57867d37efa45431a58 294 SUPERFAMILY SSF46785 6 89 1.44E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_20415 d2d1b05754e9b57867d37efa45431a58 294 Gene3D G3DSA:3.40.190.290 93 290 4.3E-35 T 13-10-2018 ambt_20415 d2d1b05754e9b57867d37efa45431a58 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 2.0E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_20415 d2d1b05754e9b57867d37efa45431a58 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_20415 d2d1b05754e9b57867d37efa45431a58 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_20415 d2d1b05754e9b57867d37efa45431a58 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_20415 d2d1b05754e9b57867d37efa45431a58 294 SUPERFAMILY SSF53850 91 293 1.28E-35 T 13-10-2018 ambt_08320 060eff223add2a42d69572ea381b8443 164 Hamap MF_00269 Thiol peroxidase [tpx]. 3 164 36.354 T 13-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 ambt_08320 060eff223add2a42d69572ea381b8443 164 Gene3D G3DSA:3.40.30.10 1 164 3.4E-47 T 13-10-2018 ambt_08320 060eff223add2a42d69572ea381b8443 164 SUPERFAMILY SSF52833 1 162 2.29E-45 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_08320 060eff223add2a42d69572ea381b8443 164 Pfam PF08534 Redoxin 20 160 6.1E-28 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ambt_08320 060eff223add2a42d69572ea381b8443 164 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 13-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 SUPERFAMILY SSF51621 464 787 2.25E-97 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 414 425 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 Gene3D G3DSA:3.30.1490.20 1 193 1.3E-71 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 Gene3D G3DSA:3.50.30.10 358 477 1.7E-39 T 13-10-2018 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 783 2.4E-61 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 PIRSF PIRSF000854 1 790 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 SUPERFAMILY SSF52009 349 463 1.1E-32 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 787 0.0 T 13-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 711 726 3.9E-5 T 13-10-2018 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 694 709 3.9E-5 T 13-10-2018 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 747 759 3.9E-5 T 13-10-2018 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 Gene3D G3DSA:3.30.470.20 194 357 2.2E-58 T 13-10-2018 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 Gene3D G3DSA:3.20.20.60 478 789 6.0E-103 T 13-10-2018 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 455 9.8E-27 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 346 1.7E-118 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 694 712 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ambt_09865 03968cc16e9500f80089f0c2221231d8 790 SUPERFAMILY SSF56059 3 384 7.3E-107 T 13-10-2018 ambt_18120 62f097192c6ab45fd530c36ddef83747 400 Pfam PF01609 Transposase DDE domain 112 329 6.0E-15 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_18120 62f097192c6ab45fd530c36ddef83747 400 SUPERFAMILY SSF53098 19 357 2.12E-36 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_21960 9d0691f1b0fdc4b149a7c055c198fe9b 100 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 23 95 8.0E-31 T 13-10-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 ambt_18595 6adefa8b6957ef5c5546fafae290cfe6 469 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 11 464 1.7E-123 T 13-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 ambt_18595 6adefa8b6957ef5c5546fafae290cfe6 469 Pfam PF03553 Na+/H+ antiporter family 164 458 1.1E-44 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 Gene3D G3DSA:3.40.50.880 9 206 1.7E-55 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 4.8E-7 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 4.8E-7 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 4.8E-7 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.0E-7 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.0E-7 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.0E-7 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 SUPERFAMILY SSF52402 197 420 5.73E-59 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 Gene3D G3DSA:3.30.300.10 406 525 8.9E-51 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 SUPERFAMILY SSF54810 405 525 6.41E-51 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 Pfam PF00117 Glutamine amidotransferase class-I 12 200 1.4E-40 T 13-10-2018 IPR017926 Glutamine amidotransferase ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 Pfam PF00958 GMP synthase C terminal domain 433 524 3.2E-43 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.5E-6 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.5E-6 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 3.5E-6 T 13-10-2018 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 Pfam PF02540 NAD synthase 215 289 5.2E-7 T 13-10-2018 IPR022310 NAD/GMP synthase ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.106 T 13-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 Gene3D G3DSA:3.40.50.620 209 405 5.7E-77 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 SUPERFAMILY SSF52317 8 237 3.82E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 3.2E-82 T 13-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ambt_04010 5025e06f5a933f8534cdc706fa94695a 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 213 525 1.1E-152 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ambt_04290 9ee5036c617ea7899e9f8e74f9ddd991 229 Pfam PF00035 Double-stranded RNA binding motif 157 224 7.2E-12 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain ambt_04290 9ee5036c617ea7899e9f8e74f9ddd991 229 Pfam PF14622 Ribonuclease-III-like 22 138 2.2E-32 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ambt_04290 9ee5036c617ea7899e9f8e74f9ddd991 229 SUPERFAMILY SSF54768 111 224 1.52E-26 T 13-10-2018 ambt_04290 9ee5036c617ea7899e9f8e74f9ddd991 229 Gene3D G3DSA:1.10.1520.10 4 149 8.3E-46 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ambt_04290 9ee5036c617ea7899e9f8e74f9ddd991 229 SMART SM00535 22 150 6.6E-55 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ambt_04290 9ee5036c617ea7899e9f8e74f9ddd991 229 Gene3D G3DSA:3.30.160.20 155 226 7.3E-18 T 13-10-2018 ambt_04290 9ee5036c617ea7899e9f8e74f9ddd991 229 SMART SM00358 157 225 5.8E-17 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain ambt_04290 9ee5036c617ea7899e9f8e74f9ddd991 229 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 221 30.124 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 ambt_04290 9ee5036c617ea7899e9f8e74f9ddd991 229 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 11 223 2.5E-74 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 ambt_04290 9ee5036c617ea7899e9f8e74f9ddd991 229 ProSitePatterns PS00517 Ribonuclease III family signature. 39 47 - T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ambt_04290 9ee5036c617ea7899e9f8e74f9ddd991 229 SUPERFAMILY SSF69065 7 156 1.13E-49 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ambt_18955 59e6eab1bc7310eab609261d45455689 132 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 124 8.7E-61 T 13-10-2018 IPR010039 Capsule biosynthesis phosphatase ambt_18955 59e6eab1bc7310eab609261d45455689 132 SUPERFAMILY SSF56784 1 116 7.72E-23 T 13-10-2018 IPR036412 HAD-like superfamily ambt_18955 59e6eab1bc7310eab609261d45455689 132 Gene3D G3DSA:3.40.50.1000 1 126 3.4E-41 T 13-10-2018 IPR023214 HAD superfamily ambt_18955 59e6eab1bc7310eab609261d45455689 132 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 64 9.7E-6 T 13-10-2018 ambt_16500 42c8749d423cbd35b1167726fee6433f 63 Gene3D G3DSA:1.10.287.310 1 63 2.8E-29 T 13-10-2018 ambt_16500 42c8749d423cbd35b1167726fee6433f 63 Pfam PF00831 Ribosomal L29 protein 5 60 1.8E-24 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16500 42c8749d423cbd35b1167726fee6433f 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.763 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16500 42c8749d423cbd35b1167726fee6433f 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.1E-22 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16500 42c8749d423cbd35b1167726fee6433f 63 SUPERFAMILY SSF46561 1 61 1.96E-22 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_06935 37ebfb549a06db7e6c789288557259bc 487 Gene3D G3DSA:3.40.309.10 251 485 3.5E-81 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ambt_06935 37ebfb549a06db7e6c789288557259bc 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ambt_06935 37ebfb549a06db7e6c789288557259bc 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ambt_06935 37ebfb549a06db7e6c789288557259bc 487 SUPERFAMILY SSF53720 3 483 3.53E-167 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_06935 37ebfb549a06db7e6c789288557259bc 487 Pfam PF00171 Aldehyde dehydrogenase family 17 476 1.0E-170 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_06935 37ebfb549a06db7e6c789288557259bc 487 Gene3D G3DSA:3.40.605.10 1 250 2.7E-91 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_06935 37ebfb549a06db7e6c789288557259bc 487 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 9 474 2.2E-202 T 13-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 ambt_13175 eaccc9369d744396d4375a52dff25bf6 283 SUPERFAMILY SSF50341 118 258 9.81E-17 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ambt_13175 eaccc9369d744396d4375a52dff25bf6 283 Gene3D G3DSA:2.30.30.40 127 249 1.1E-5 T 13-10-2018 ambt_13175 eaccc9369d744396d4375a52dff25bf6 283 Pfam PF01584 CheW-like domain 124 257 1.2E-14 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_13175 eaccc9369d744396d4375a52dff25bf6 283 SMART SM00260 120 255 1.9E-5 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_13175 eaccc9369d744396d4375a52dff25bf6 283 PIRSF PIRSF020479 7 269 3.6E-81 T 13-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like ambt_13175 eaccc9369d744396d4375a52dff25bf6 283 Gene3D G3DSA:2.40.50.180 141 254 1.1E-5 T 13-10-2018 ambt_00705 2f6221f958d2c272f15c3a904db8b1a5 308 SUPERFAMILY SSF51395 12 269 9.66E-61 T 13-10-2018 ambt_00705 2f6221f958d2c272f15c3a904db8b1a5 308 Pfam PF01207 Dihydrouridine synthase (Dus) 1 281 4.9E-68 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ambt_00705 2f6221f958d2c272f15c3a904db8b1a5 308 Gene3D G3DSA:1.20.120.1460 213 293 3.7E-21 T 13-10-2018 ambt_00705 2f6221f958d2c272f15c3a904db8b1a5 308 PIRSF PIRSF006621 1 293 2.5E-61 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ambt_00705 2f6221f958d2c272f15c3a904db8b1a5 308 Gene3D G3DSA:3.20.20.70 1 208 9.4E-62 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_00705 2f6221f958d2c272f15c3a904db8b1a5 308 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 51 69 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 225 237 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 222 247 2.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 88 107 2.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 49 68 2.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 198 219 2.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 177 197 2.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 68 88 2.6E-66 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 177 192 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 147 159 7.6E-20 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 238 248 7.6E-20 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 182 7.6E-20 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 47 56 7.6E-20 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 107 119 7.6E-20 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 119 133 7.6E-20 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 51 248 1.3E-82 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ambt_13240 c8d70aaec67c9e3441a2429eacfba305 252 Pfam PF00813 FliP family 51 244 2.0E-80 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ambt_03835 c3879743a0217ab75c9215d9f2251089 302 SMART SM00850 203 300 1.2E-23 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ambt_03835 c3879743a0217ab75c9215d9f2251089 302 Gene3D G3DSA:2.40.50.40 195 263 4.2E-10 T 13-10-2018 ambt_03835 c3879743a0217ab75c9215d9f2251089 302 PIRSF PIRSF031767 4 302 1.8E-47 T 13-10-2018 IPR012379 LytTR MHYE transcriptional regulator, putative ambt_03835 c3879743a0217ab75c9215d9f2251089 302 Pfam PF04397 LytTr DNA-binding domain 206 299 5.1E-19 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ambt_00140 fffb78105148980cd0a6d934248252a3 224 Pfam PF03922 OmpW family 24 224 1.7E-59 T 13-10-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 ambt_00140 fffb78105148980cd0a6d934248252a3 224 Gene3D G3DSA:2.40.160.20 23 224 2.4E-72 T 13-10-2018 ambt_00140 fffb78105148980cd0a6d934248252a3 224 SUPERFAMILY SSF56925 24 224 2.12E-29 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ambt_03875 c71e2705ddfc8a044d62afb4a80ae262 1155 Gene3D G3DSA:2.60.40.10 324 424 2.9E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_03875 c71e2705ddfc8a044d62afb4a80ae262 1155 Gene3D G3DSA:2.60.40.1120 549 623 3.9E-7 T 13-10-2018 ambt_03875 c71e2705ddfc8a044d62afb4a80ae262 1155 Gene3D G3DSA:2.60.40.10 145 224 1.9E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_03875 c71e2705ddfc8a044d62afb4a80ae262 1155 Gene3D G3DSA:2.60.40.10 227 318 7.2E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_03875 c71e2705ddfc8a044d62afb4a80ae262 1155 Pfam PF13715 CarboxypepD_reg-like domain 550 598 9.7E-10 T 13-10-2018 ambt_03875 c71e2705ddfc8a044d62afb4a80ae262 1155 SUPERFAMILY SSF49464 549 599 4.9E-10 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 Gene3D G3DSA:3.60.20.40 369 559 1.3E-67 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 Gene3D G3DSA:1.10.246.130 262 367 2.1E-37 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 SUPERFAMILY SSF56235 25 559 6.95E-182 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 Pfam PF01019 Gamma-glutamyltranspeptidase 52 554 3.5E-163 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 393 411 2.0E-45 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 130 148 2.0E-45 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 275 294 2.0E-45 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 167 2.0E-45 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 369 387 2.0E-45 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 59 84 2.0E-45 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 262 2.0E-45 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 424 439 2.0E-45 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 448 465 2.0E-45 T 13-10-2018 ambt_16320 5927408f3fe5fad183b62d4405f422a3 559 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 37 550 7.6E-126 T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 Gene3D G3DSA:3.40.50.12740 679 797 4.8E-39 T 13-10-2018 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 543 655 2.3E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 SUPERFAMILY SSF47384 418 496 6.47E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 Pfam PF00512 His Kinase A (phospho-acceptor) domain 431 495 5.1E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 Gene3D G3DSA:1.10.287.130 406 493 5.2E-24 T 13-10-2018 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 SMART SM00388 430 495 4.0E-23 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 Pfam PF00072 Response regulator receiver domain 682 792 1.1E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 SMART SM00028 219 252 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 SMART SM00028 179 212 0.13 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 SMART SM00028 139 172 320.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 SMART SM00028 257 290 44.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 Pfam PF13424 Tetratricopeptide repeat 137 210 5.0E-9 T 13-10-2018 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 SMART SM00387 542 658 1.2E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 Gene3D G3DSA:3.30.565.10 494 658 2.6E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 SUPERFAMILY SSF55874 484 654 3.01E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 SMART SM00448 680 792 2.6E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 655 2.5E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 636 2.5E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 611 2.5E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 597 2.5E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 SUPERFAMILY SSF52172 678 797 3.27E-36 T 13-10-2018 IPR011006 CheY-like superfamily ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 Gene3D G3DSA:1.25.40.10 118 249 6.6E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12000 98584c5d023e3253d444dc3957ab3a98 798 SUPERFAMILY SSF48452 74 244 6.16E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 288 3.3E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 SMART SM00304 176 228 1.3E-4 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 Gene3D G3DSA:3.30.565.10 291 438 3.4E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 SMART SM00387 328 438 6.0E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 SUPERFAMILY SSF47384 213 289 1.0E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 SUPERFAMILY SSF55874 279 436 3.54E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 SMART SM00388 229 289 2.1E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 Gene3D G3DSA:1.10.287.130 173 284 1.4E-23 T 13-10-2018 ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 9.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 9.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 9.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_21350 4e14284d578d8ec5a1f8b6499ab265e1 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 437 4.3E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_18645 619ef831e3c53fcf5614f06070a292f7 189 Pfam PF04345 Chorismate lyase 12 179 9.2E-35 T 13-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 ambt_18645 619ef831e3c53fcf5614f06070a292f7 189 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 13 179 25.278 T 13-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 ambt_18645 619ef831e3c53fcf5614f06070a292f7 189 SUPERFAMILY SSF64288 19 179 2.43E-38 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ambt_18645 619ef831e3c53fcf5614f06070a292f7 189 Gene3D G3DSA:3.40.1410.10 7 179 1.4E-46 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 Gene3D G3DSA:3.90.1440.10 229 368 9.5E-174 T 13-10-2018 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 Gene3D G3DSA:3.40.50.300 22 415 9.5E-174 T 13-10-2018 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 Pfam PF07516 SecA Wing and Scaffold domain 617 829 8.7E-71 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 Pfam PF02810 SEC-C motif 885 903 1.8E-10 T 13-10-2018 IPR004027 SEC-C motif ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 SMART SM00957 6 402 0.0 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 PRINTS PR00906 SecA protein signature 101 115 1.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 PRINTS PR00906 SecA protein signature 413 426 1.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 PRINTS PR00906 SecA protein signature 117 127 1.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 PRINTS PR00906 SecA protein signature 63 87 1.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 PRINTS PR00906 SecA protein signature 376 393 1.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 PRINTS PR00906 SecA protein signature 170 190 1.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 PRINTS PR00906 SecA protein signature 339 361 1.3E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 Pfam PF07517 SecA DEAD-like domain 7 402 3.9E-133 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 SUPERFAMILY SSF52540 416 618 5.02E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 SUPERFAMILY SSF52540 5 415 2.04E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 ProSitePatterns PS01312 SecA family signature. 500 515 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 SUPERFAMILY SSF81886 620 893 8.63E-86 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 Gene3D G3DSA:3.40.50.300 417 620 3.4E-91 T 13-10-2018 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 Gene3D G3DSA:1.10.3060.10 621 833 1.5E-79 T 13-10-2018 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.961 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 Pfam PF01043 SecA preprotein cross-linking domain 232 358 9.0E-37 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 SMART SM00958 228 358 6.1E-77 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ambt_02245 7efa078aa0a3efbd2b7a8a342430f171 905 SUPERFAMILY SSF81767 227 368 1.44E-41 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 ambt_00365 1a6667ea0d041bc5ebc311eb4b193312 207 TIGRFAM TIGR00235 udk: uridine kinase 3 205 4.3E-72 T 13-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 ambt_00365 1a6667ea0d041bc5ebc311eb4b193312 207 PRINTS PR00988 Uridine kinase signature 81 96 9.2E-27 T 13-10-2018 ambt_00365 1a6667ea0d041bc5ebc311eb4b193312 207 PRINTS PR00988 Uridine kinase signature 4 21 9.2E-27 T 13-10-2018 ambt_00365 1a6667ea0d041bc5ebc311eb4b193312 207 PRINTS PR00988 Uridine kinase signature 137 147 9.2E-27 T 13-10-2018 ambt_00365 1a6667ea0d041bc5ebc311eb4b193312 207 PRINTS PR00988 Uridine kinase signature 36 47 9.2E-27 T 13-10-2018 ambt_00365 1a6667ea0d041bc5ebc311eb4b193312 207 PRINTS PR00988 Uridine kinase signature 151 162 9.2E-27 T 13-10-2018 ambt_00365 1a6667ea0d041bc5ebc311eb4b193312 207 PRINTS PR00988 Uridine kinase signature 173 186 9.2E-27 T 13-10-2018 ambt_00365 1a6667ea0d041bc5ebc311eb4b193312 207 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 193 3.3E-41 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 ambt_00365 1a6667ea0d041bc5ebc311eb4b193312 207 SUPERFAMILY SSF52540 3 199 1.17E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00365 1a6667ea0d041bc5ebc311eb4b193312 207 Gene3D G3DSA:3.40.50.300 1 207 2.8E-62 T 13-10-2018 ambt_00920 b1875d7261d574da9ba7b14d3765db0f 309 Pfam PF00294 pfkB family carbohydrate kinase 8 296 2.9E-47 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB ambt_00920 b1875d7261d574da9ba7b14d3765db0f 309 SUPERFAMILY SSF53613 1 296 1.08E-64 T 13-10-2018 IPR029056 Ribokinase-like ambt_00920 b1875d7261d574da9ba7b14d3765db0f 309 Gene3D G3DSA:3.40.1190.20 1 303 1.6E-66 T 13-10-2018 IPR029056 Ribokinase-like ambt_03015 51274fbb95eab0b2380b4f95a9deb954 846 SUPERFAMILY SSF56935 44 845 4.27E-81 T 13-10-2018 ambt_03015 51274fbb95eab0b2380b4f95a9deb954 846 Pfam PF00593 TonB dependent receptor 368 843 2.5E-14 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_03015 51274fbb95eab0b2380b4f95a9deb954 846 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 175 1.1E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_03015 51274fbb95eab0b2380b4f95a9deb954 846 Gene3D G3DSA:2.170.130.10 39 185 5.2E-19 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_03015 51274fbb95eab0b2380b4f95a9deb954 846 Gene3D G3DSA:2.40.170.20 192 845 1.2E-49 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_13315 166e784492448ec20b6ce3f4885e6f19 266 Gene3D G3DSA:1.10.8.410 212 266 3.8E-9 T 13-10-2018 ambt_13315 166e784492448ec20b6ce3f4885e6f19 266 Pfam PF00669 Bacterial flagellin N-terminal helical region 12 136 2.2E-24 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ambt_13315 166e784492448ec20b6ce3f4885e6f19 266 PRINTS PR00207 Flagellin signature 106 129 1.4E-14 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13315 166e784492448ec20b6ce3f4885e6f19 266 PRINTS PR00207 Flagellin signature 71 90 1.4E-14 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13315 166e784492448ec20b6ce3f4885e6f19 266 PRINTS PR00207 Flagellin signature 32 49 1.4E-14 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13315 166e784492448ec20b6ce3f4885e6f19 266 Gene3D G3DSA:1.20.58.1830 13 28 5.0E-43 T 13-10-2018 ambt_13315 166e784492448ec20b6ce3f4885e6f19 266 Gene3D G3DSA:1.20.1330.10 40 160 5.0E-43 T 13-10-2018 ambt_13315 166e784492448ec20b6ce3f4885e6f19 266 Pfam PF00700 Bacterial flagellin C-terminal helical region 181 265 3.5E-15 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ambt_13315 166e784492448ec20b6ce3f4885e6f19 266 SUPERFAMILY SSF64518 13 265 4.97E-59 T 13-10-2018 ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 4.3E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 4.3E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 4.3E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 4.3E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 4.3E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 3.1E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.1E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 3.1E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 Pfam PF00106 short chain dehydrogenase 10 204 2.7E-50 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 SUPERFAMILY SSF51735 6 253 3.41E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_02920 6c54ce62c18c81bd38b669685835bb3e 297 Gene3D G3DSA:3.40.50.720 1 290 6.0E-75 T 13-10-2018 ambt_02385 409d5550e4def41ebf89f9873d718f37 409 Gene3D G3DSA:3.40.50.720 14 312 4.9E-109 T 13-10-2018 ambt_02385 409d5550e4def41ebf89f9873d718f37 409 SUPERFAMILY SSF52283 7 134 5.1E-49 T 13-10-2018 ambt_02385 409d5550e4def41ebf89f9873d718f37 409 Gene3D G3DSA:3.30.70.260 328 408 7.5E-32 T 13-10-2018 ambt_02385 409d5550e4def41ebf89f9873d718f37 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ambt_02385 409d5550e4def41ebf89f9873d718f37 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 4.7E-38 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ambt_02385 409d5550e4def41ebf89f9873d718f37 409 Gene3D G3DSA:3.40.50.720 109 297 4.9E-109 T 13-10-2018 ambt_02385 409d5550e4def41ebf89f9873d718f37 409 SUPERFAMILY SSF51735 108 295 9.87E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_02385 409d5550e4def41ebf89f9873d718f37 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ambt_02385 409d5550e4def41ebf89f9873d718f37 409 SUPERFAMILY SSF55021 333 408 1.4E-16 T 13-10-2018 ambt_02385 409d5550e4def41ebf89f9873d718f37 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 7.6E-53 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ambt_14365 5a06c7ec7c007214462e3c93ab37708c 727 SUPERFAMILY SSF50969 274 388 1.65E-5 T 13-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like ambt_14365 5a06c7ec7c007214462e3c93ab37708c 727 SUPERFAMILY SSF161098 419 522 2.88E-9 T 13-10-2018 IPR035906 MetI-like superfamily ambt_14365 5a06c7ec7c007214462e3c93ab37708c 727 SUPERFAMILY SSF161098 540 713 1.24E-20 T 13-10-2018 IPR035906 MetI-like superfamily ambt_14365 5a06c7ec7c007214462e3c93ab37708c 727 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 445 721 2.2E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ambt_14365 5a06c7ec7c007214462e3c93ab37708c 727 Gene3D G3DSA:1.10.3720.10 421 525 1.4E-5 T 13-10-2018 IPR035906 MetI-like superfamily ambt_14365 5a06c7ec7c007214462e3c93ab37708c 727 Gene3D G3DSA:1.10.3720.10 526 723 7.1E-24 T 13-10-2018 IPR035906 MetI-like superfamily ambt_05205 ad140791d5d7dfa7a6d5d3f57c643baf 351 Gene3D G3DSA:1.20.120.350 18 153 2.2E-5 T 13-10-2018 IPR027359 Voltage-dependent channel domain superfamily ambt_10675 91cf06d358442f63d8ebed68053659cc 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 39 484 1.8E-147 T 13-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase ambt_10675 91cf06d358442f63d8ebed68053659cc 484 Pfam PF02397 Bacterial sugar transferase 294 475 2.1E-63 T 13-10-2018 IPR003362 Bacterial sugar transferase ambt_10675 91cf06d358442f63d8ebed68053659cc 484 SUPERFAMILY SSF51735 164 286 5.51E-7 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_10675 91cf06d358442f63d8ebed68053659cc 484 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 41 484 7.3E-163 T 13-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 ambt_10675 91cf06d358442f63d8ebed68053659cc 484 Gene3D G3DSA:3.40.50.720 159 283 2.5E-17 T 13-10-2018 ambt_10675 91cf06d358442f63d8ebed68053659cc 484 Pfam PF13727 CoA-binding domain 81 258 7.2E-42 T 13-10-2018 ambt_14445 76e443366170b179565eb30f8f17e916 538 SMART SM00267 94 274 9.6E-53 T 13-10-2018 IPR000160 GGDEF domain ambt_14445 76e443366170b179565eb30f8f17e916 538 SUPERFAMILY SSF141868 289 537 7.85E-76 T 13-10-2018 IPR035919 EAL domain superfamily ambt_14445 76e443366170b179565eb30f8f17e916 538 SMART SM00052 284 531 1.4E-85 T 13-10-2018 IPR001633 EAL domain ambt_14445 76e443366170b179565eb30f8f17e916 538 Pfam PF00563 EAL domain 291 526 8.9E-64 T 13-10-2018 IPR001633 EAL domain ambt_14445 76e443366170b179565eb30f8f17e916 538 SUPERFAMILY SSF55073 110 276 1.49E-46 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_14445 76e443366170b179565eb30f8f17e916 538 Gene3D G3DSA:3.20.20.450 285 538 8.0E-83 T 13-10-2018 IPR035919 EAL domain superfamily ambt_14445 76e443366170b179565eb30f8f17e916 538 Gene3D G3DSA:3.30.70.270 99 281 3.9E-54 T 13-10-2018 ambt_14445 76e443366170b179565eb30f8f17e916 538 Pfam PF00990 Diguanylate cyclase, GGDEF domain 105 269 2.7E-43 T 13-10-2018 IPR000160 GGDEF domain ambt_14445 76e443366170b179565eb30f8f17e916 538 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 102 271 2.9E-37 T 13-10-2018 IPR000160 GGDEF domain ambt_06735 e3a7b966672474814629669ba4a053b8 518 Gene3D G3DSA:3.60.110.10 226 513 3.4E-58 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ambt_06735 e3a7b966672474814629669ba4a053b8 518 SUPERFAMILY SSF56317 230 497 6.67E-60 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ambt_06735 e3a7b966672474814629669ba4a053b8 518 Pfam PF00795 Carbon-nitrogen hydrolase 234 491 2.8E-36 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ambt_06735 e3a7b966672474814629669ba4a053b8 518 Pfam PF00583 Acetyltransferase (GNAT) family 55 145 3.9E-6 T 13-10-2018 IPR000182 GNAT domain ambt_06735 e3a7b966672474814629669ba4a053b8 518 SUPERFAMILY SSF55729 17 146 5.74E-15 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_06735 e3a7b966672474814629669ba4a053b8 518 Gene3D G3DSA:3.40.630.30 6 225 9.2E-53 T 13-10-2018 ambt_15425 19ce46811238a8e5867e1c9aeba2a4a4 507 SMART SM01118 7 213 1.7E-28 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 ambt_15425 19ce46811238a8e5867e1c9aeba2a4a4 507 SUPERFAMILY SSF55154 6 229 8.99E-39 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 ambt_15425 19ce46811238a8e5867e1c9aeba2a4a4 507 Pfam PF01928 CYTH domain 7 207 2.1E-21 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 ambt_15425 19ce46811238a8e5867e1c9aeba2a4a4 507 Gene3D G3DSA:2.40.320.10 4 208 5.5E-27 T 13-10-2018 ambt_13015 06b18799e65280851156fe31c413c411 150 Pfam PF04024 PspC domain 5 63 4.6E-19 T 13-10-2018 IPR007168 Phage shock protein, PspC, N-terminal ambt_13015 06b18799e65280851156fe31c413c411 150 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 5 150 5.1E-43 T 13-10-2018 IPR014320 Phage shock protein, PspC ambt_02120 b2c4696f647df3fb828e1646768c4f77 246 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 168 246 5.6E-35 T 13-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 ambt_02120 b2c4696f647df3fb828e1646768c4f77 246 Gene3D G3DSA:3.40.30.10 176 246 7.3E-25 T 13-10-2018 ambt_02120 b2c4696f647df3fb828e1646768c4f77 246 Pfam PF08534 Redoxin 9 164 4.8E-31 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ambt_02120 b2c4696f647df3fb828e1646768c4f77 246 SUPERFAMILY SSF52833 9 244 3.62E-43 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_02120 b2c4696f647df3fb828e1646768c4f77 246 PRINTS PR00160 Glutaredoxin signature 232 245 6.2E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup ambt_02120 b2c4696f647df3fb828e1646768c4f77 246 PRINTS PR00160 Glutaredoxin signature 177 195 6.2E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup ambt_02120 b2c4696f647df3fb828e1646768c4f77 246 PRINTS PR00160 Glutaredoxin signature 218 231 6.2E-15 T 13-10-2018 IPR014025 Glutaredoxin subgroup ambt_02120 b2c4696f647df3fb828e1646768c4f77 246 ProSitePatterns PS00195 Glutaredoxin active site. 179 195 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 ambt_02120 b2c4696f647df3fb828e1646768c4f77 246 Gene3D G3DSA:3.40.30.10 8 169 2.2E-59 T 13-10-2018 ambt_02120 b2c4696f647df3fb828e1646768c4f77 246 Pfam PF00462 Glutaredoxin 177 235 6.6E-18 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ambt_08245 7d8cb85398d74b5408075cefec64caee 278 Gene3D G3DSA:1.20.58.1490 1 54 4.8E-21 T 13-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily ambt_08245 7d8cb85398d74b5408075cefec64caee 278 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 2 277 1.0E-79 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III ambt_08245 7d8cb85398d74b5408075cefec64caee 278 PRINTS PR00605 Class IC cytochrome C signature 250 272 1.5E-6 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 ambt_08245 7d8cb85398d74b5408075cefec64caee 278 PRINTS PR00605 Class IC cytochrome C signature 206 217 1.5E-6 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 ambt_08245 7d8cb85398d74b5408075cefec64caee 278 PIRSF PIRSF000006 1 278 2.5E-96 T 13-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III ambt_08245 7d8cb85398d74b5408075cefec64caee 278 SUPERFAMILY SSF46626 16 195 2.29E-30 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_08245 7d8cb85398d74b5408075cefec64caee 278 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 1 43 4.5E-22 T 13-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal ambt_08245 7d8cb85398d74b5408075cefec64caee 278 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 198 272 1.0E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_08245 7d8cb85398d74b5408075cefec64caee 278 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 110 184 3.8E-12 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_08245 7d8cb85398d74b5408075cefec64caee 278 SUPERFAMILY SSF46626 194 277 1.05E-22 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_08245 7d8cb85398d74b5408075cefec64caee 278 Gene3D G3DSA:1.10.760.10 166 252 3.9E-73 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_08245 7d8cb85398d74b5408075cefec64caee 278 Gene3D G3DSA:1.10.760.10 87 275 3.9E-73 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_13300 30467f0c9451ae1385af73f4261002de 446 SUPERFAMILY SSF52540 137 370 3.02E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13300 30467f0c9451ae1385af73f4261002de 446 SMART SM00382 149 293 3.6E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13300 30467f0c9451ae1385af73f4261002de 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 436 3.4E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_13300 30467f0c9451ae1385af73f4261002de 446 SUPERFAMILY SSF52172 1 173 3.27E-39 T 13-10-2018 IPR011006 CheY-like superfamily ambt_13300 30467f0c9451ae1385af73f4261002de 446 Gene3D G3DSA:3.40.50.300 124 300 2.5E-62 T 13-10-2018 ambt_13300 30467f0c9451ae1385af73f4261002de 446 Pfam PF00072 Response regulator receiver domain 6 114 4.3E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_13300 30467f0c9451ae1385af73f4261002de 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ambt_13300 30467f0c9451ae1385af73f4261002de 446 Pfam PF00158 Sigma-54 interaction domain 133 295 1.0E-65 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ambt_13300 30467f0c9451ae1385af73f4261002de 446 Gene3D G3DSA:1.10.8.60 301 378 1.1E-23 T 13-10-2018 ambt_13300 30467f0c9451ae1385af73f4261002de 446 SUPERFAMILY SSF46689 342 436 1.16E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_13300 30467f0c9451ae1385af73f4261002de 446 Gene3D G3DSA:3.40.50.2300 1 123 3.7E-35 T 13-10-2018 ambt_13300 30467f0c9451ae1385af73f4261002de 446 SMART SM00448 4 115 6.7E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_13300 30467f0c9451ae1385af73f4261002de 446 Gene3D G3DSA:1.10.10.60 379 441 1.2E-10 T 13-10-2018 ambt_13300 30467f0c9451ae1385af73f4261002de 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ambt_01315 a24b7e98f1aec5bc8ab18d06ec3e40ed 372 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 19 132 2.8E-12 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ambt_01315 a24b7e98f1aec5bc8ab18d06ec3e40ed 372 SUPERFAMILY SSF51735 170 329 2.07E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_01315 a24b7e98f1aec5bc8ab18d06ec3e40ed 372 SMART SM00996 4 369 2.3E-15 T 13-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ambt_01315 a24b7e98f1aec5bc8ab18d06ec3e40ed 372 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 184 327 1.4E-36 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ambt_01315 a24b7e98f1aec5bc8ab18d06ec3e40ed 372 SUPERFAMILY SSF52283 7 366 1.53E-27 T 13-10-2018 ambt_01315 a24b7e98f1aec5bc8ab18d06ec3e40ed 372 Gene3D G3DSA:3.40.50.720 172 329 2.4E-102 T 13-10-2018 ambt_01315 a24b7e98f1aec5bc8ab18d06ec3e40ed 372 SMART SM00997 170 329 1.5E-64 T 13-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ambt_01315 a24b7e98f1aec5bc8ab18d06ec3e40ed 372 Gene3D G3DSA:3.40.50.1480 9 367 2.4E-102 T 13-10-2018 ambt_04380 4a54c8f9df95e9ddc647b1d665114b5a 321 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 320 28.368 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ambt_04380 4a54c8f9df95e9ddc647b1d665114b5a 321 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 319 1.0E-110 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ambt_04380 4a54c8f9df95e9ddc647b1d665114b5a 321 Gene3D G3DSA:3.30.1330.10 1 141 3.1E-44 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ambt_04380 4a54c8f9df95e9ddc647b1d665114b5a 321 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 135 5.4E-24 T 13-10-2018 IPR016188 PurM-like, N-terminal domain ambt_04380 4a54c8f9df95e9ddc647b1d665114b5a 321 PIRSF PIRSF005303 1 320 2.9E-90 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ambt_04380 4a54c8f9df95e9ddc647b1d665114b5a 321 SUPERFAMILY SSF56042 142 303 6.58E-42 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ambt_04380 4a54c8f9df95e9ddc647b1d665114b5a 321 Gene3D G3DSA:3.90.650.10 143 320 4.3E-53 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ambt_04380 4a54c8f9df95e9ddc647b1d665114b5a 321 SUPERFAMILY SSF55326 3 136 4.19E-34 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ambt_04380 4a54c8f9df95e9ddc647b1d665114b5a 321 Pfam PF02769 AIR synthase related protein, C-terminal domain 148 297 7.9E-10 T 13-10-2018 IPR010918 PurM-like, C-terminal domain ambt_04675 95fd460f7e702843cd45f294ea835990 300 SUPERFAMILY SSF54913 227 299 4.56E-21 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta ambt_04675 95fd460f7e702843cd45f294ea835990 300 Gene3D G3DSA:3.30.70.120 227 299 1.8E-31 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ambt_04675 95fd460f7e702843cd45f294ea835990 300 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 5.7E-54 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ambt_04675 95fd460f7e702843cd45f294ea835990 300 Pfam PF08029 HisG, C-terminal domain 224 297 4.0E-23 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ambt_04675 95fd460f7e702843cd45f294ea835990 300 SUPERFAMILY SSF53850 6 224 1.36E-65 T 13-10-2018 ambt_04675 95fd460f7e702843cd45f294ea835990 300 Gene3D G3DSA:3.40.190.10 7 221 1.0E-67 T 13-10-2018 ambt_04675 95fd460f7e702843cd45f294ea835990 300 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 300 33.957 T 13-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 ambt_04675 95fd460f7e702843cd45f294ea835990 300 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 13-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 ambt_04675 95fd460f7e702843cd45f294ea835990 300 Pfam PF01634 ATP phosphoribosyltransferase 54 218 7.8E-46 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ambt_04675 95fd460f7e702843cd45f294ea835990 300 Gene3D G3DSA:3.40.190.10 102 191 1.0E-67 T 13-10-2018 ambt_04675 95fd460f7e702843cd45f294ea835990 300 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 202 299 7.4E-28 T 13-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ambt_11740 ca0828bd0599babb9578df818dd7b703 312 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 309 53.513 T 13-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 ambt_11740 ca0828bd0599babb9578df818dd7b703 312 PIRSF PIRSF006621 1 312 1.2E-75 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ambt_11740 ca0828bd0599babb9578df818dd7b703 312 Pfam PF01207 Dihydrouridine synthase (Dus) 4 299 6.7E-72 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ambt_11740 ca0828bd0599babb9578df818dd7b703 312 Gene3D G3DSA:3.20.20.70 1 241 2.2E-75 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_11740 ca0828bd0599babb9578df818dd7b703 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ambt_11740 ca0828bd0599babb9578df818dd7b703 312 Gene3D G3DSA:1.20.225.30 242 310 3.9E-22 T 13-10-2018 ambt_11740 ca0828bd0599babb9578df818dd7b703 312 SUPERFAMILY SSF51395 1 307 8.24E-67 T 13-10-2018 ambt_12550 de536e8fbd44c369eff12075d661cb73 692 Gene3D G3DSA:2.120.10.30 177 424 9.5E-27 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_12550 de536e8fbd44c369eff12075d661cb73 692 Gene3D G3DSA:2.120.10.30 21 176 2.4E-22 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_12550 de536e8fbd44c369eff12075d661cb73 692 Gene3D G3DSA:3.40.50.1820 435 692 4.8E-64 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_12550 de536e8fbd44c369eff12075d661cb73 692 Pfam PF00326 Prolyl oligopeptidase family 474 681 7.4E-49 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ambt_12550 de536e8fbd44c369eff12075d661cb73 692 SUPERFAMILY SSF53474 428 681 1.23E-63 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_12550 de536e8fbd44c369eff12075d661cb73 692 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 196 286 1.3E-5 T 13-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ambt_12550 de536e8fbd44c369eff12075d661cb73 692 Pfam PF07676 WD40-like Beta Propeller Repeat 88 120 7.4E-5 T 13-10-2018 IPR011659 WD40-like Beta Propeller ambt_12550 de536e8fbd44c369eff12075d661cb73 692 Pfam PF07676 WD40-like Beta Propeller Repeat 143 154 0.062 T 13-10-2018 IPR011659 WD40-like Beta Propeller ambt_12550 de536e8fbd44c369eff12075d661cb73 692 SUPERFAMILY SSF82171 43 428 7.19E-50 T 13-10-2018 ambt_14455 e7c2bde853e1fa1c6a1d3854f462823e 486 Gene3D G3DSA:1.20.1530.20 4 393 5.6E-18 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily ambt_14455 e7c2bde853e1fa1c6a1d3854f462823e 486 SUPERFAMILY SSF116726 405 471 2.09E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_14455 e7c2bde853e1fa1c6a1d3854f462823e 486 Pfam PF02080 TrkA-C domain 415 471 1.8E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ambt_14455 e7c2bde853e1fa1c6a1d3854f462823e 486 Pfam PF00999 Sodium/hydrogen exchanger family 11 386 1.3E-49 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ambt_14455 e7c2bde853e1fa1c6a1d3854f462823e 486 Gene3D G3DSA:3.30.70.1450 394 484 1.9E-14 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_20610 bc3ce3d90a9ac21957f396e3377c002b 92 Pfam PF00639 PPIC-type PPIASE domain 12 87 1.9E-21 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 ambt_20610 bc3ce3d90a9ac21957f396e3377c002b 92 SUPERFAMILY SSF54534 5 87 6.41E-28 T 13-10-2018 ambt_20610 bc3ce3d90a9ac21957f396e3377c002b 92 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 30 50 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 ambt_20610 bc3ce3d90a9ac21957f396e3377c002b 92 Gene3D G3DSA:3.10.50.40 2 92 2.9E-36 T 13-10-2018 ambt_14540 b4b581450f8655ec5be827116a0de88e 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 44.788 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_14540 b4b581450f8655ec5be827116a0de88e 420 Gene3D G3DSA:3.65.10.10 6 415 8.4E-168 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ambt_14540 b4b581450f8655ec5be827116a0de88e 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 8.0E-118 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 ambt_14540 b4b581450f8655ec5be827116a0de88e 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 417 2.7E-179 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_14540 b4b581450f8655ec5be827116a0de88e 420 Gene3D G3DSA:3.65.10.10 21 230 8.4E-168 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ambt_14540 b4b581450f8655ec5be827116a0de88e 420 SUPERFAMILY SSF55205 2 419 9.97E-144 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ambt_06570 519ada0888d636be70781b794bbc8c54 304 SUPERFAMILY SSF53474 16 299 3.8E-49 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_06570 519ada0888d636be70781b794bbc8c54 304 PRINTS PR00412 Epoxide hydrolase signature 53 71 5.1E-14 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_06570 519ada0888d636be70781b794bbc8c54 304 PRINTS PR00412 Epoxide hydrolase signature 73 88 5.1E-14 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_06570 519ada0888d636be70781b794bbc8c54 304 PRINTS PR00412 Epoxide hydrolase signature 119 132 5.1E-14 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_06570 519ada0888d636be70781b794bbc8c54 304 PRINTS PR00412 Epoxide hydrolase signature 275 297 5.1E-14 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_06570 519ada0888d636be70781b794bbc8c54 304 Pfam PF12697 Alpha/beta hydrolase family 49 292 1.4E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_06570 519ada0888d636be70781b794bbc8c54 304 Gene3D G3DSA:3.40.50.1820 1 300 2.6E-81 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_09810 f629bd1f203ec563a833b2d955407b46 778 Pfam PF14592 Chondroitinase B 63 462 2.8E-118 T 13-10-2018 IPR039513 PL-6 family ambt_09810 f629bd1f203ec563a833b2d955407b46 778 SUPERFAMILY SSF51126 62 439 2.01E-90 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor ambt_09810 f629bd1f203ec563a833b2d955407b46 778 Gene3D G3DSA:2.160.20.10 61 502 1.2E-122 T 13-10-2018 IPR012334 Pectin lyase fold ambt_09810 f629bd1f203ec563a833b2d955407b46 778 Gene3D G3DSA:2.160.20.10 505 778 1.8E-14 T 13-10-2018 IPR012334 Pectin lyase fold ambt_09810 f629bd1f203ec563a833b2d955407b46 778 SMART SM00710 300 325 21.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_09810 f629bd1f203ec563a833b2d955407b46 778 SMART SM00710 188 210 1900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_09810 f629bd1f203ec563a833b2d955407b46 778 SMART SM00710 278 299 6200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_09810 f629bd1f203ec563a833b2d955407b46 778 SMART SM00710 663 685 10000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_09810 f629bd1f203ec563a833b2d955407b46 778 SMART SM00710 694 723 580.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_09810 f629bd1f203ec563a833b2d955407b46 778 SMART SM00710 330 351 9300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_09810 f629bd1f203ec563a833b2d955407b46 778 SMART SM00710 631 652 7000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_09810 f629bd1f203ec563a833b2d955407b46 778 SUPERFAMILY SSF51126 506 764 1.5E-29 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 2.3E-74 T 13-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 13-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 Pfam PF00406 Adenylate kinase 5 185 3.0E-58 T 13-10-2018 ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 51.058 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 SUPERFAMILY SSF52540 1 213 1.21E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 PRINTS PR00094 Adenylate kinase signature 32 46 7.4E-36 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 PRINTS PR00094 Adenylate kinase signature 81 97 7.4E-36 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 PRINTS PR00094 Adenylate kinase signature 173 187 7.4E-36 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 PRINTS PR00094 Adenylate kinase signature 4 17 7.4E-36 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 PRINTS PR00094 Adenylate kinase signature 156 171 7.4E-36 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 Gene3D G3DSA:3.40.50.300 1 213 4.3E-78 T 13-10-2018 ambt_04590 ffe7f330611bb5917a39ddadd112fad6 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.6E-15 T 13-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 ambt_22155 0b9b20086b2cf8f6adbe40666ead3fb3 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 3.1E-110 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22155 0b9b20086b2cf8f6adbe40666ead3fb3 286 Pfam PF00231 ATP synthase 5 285 1.6E-95 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22155 0b9b20086b2cf8f6adbe40666ead3fb3 286 SUPERFAMILY SSF52943 2 286 1.37E-96 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22155 0b9b20086b2cf8f6adbe40666ead3fb3 286 Gene3D G3DSA:3.40.1380.10 61 205 5.7E-109 T 13-10-2018 ambt_22155 0b9b20086b2cf8f6adbe40666ead3fb3 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 36.5 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22155 0b9b20086b2cf8f6adbe40666ead3fb3 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 13-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22155 0b9b20086b2cf8f6adbe40666ead3fb3 286 Gene3D G3DSA:1.10.287.80 6 282 5.7E-109 T 13-10-2018 ambt_22155 0b9b20086b2cf8f6adbe40666ead3fb3 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 6.4E-38 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22155 0b9b20086b2cf8f6adbe40666ead3fb3 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 6.4E-38 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22155 0b9b20086b2cf8f6adbe40666ead3fb3 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 6.4E-38 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22155 0b9b20086b2cf8f6adbe40666ead3fb3 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 6.4E-38 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_06605 916acd79b2e3b500ced564d3742190f8 218 Gene3D G3DSA:1.10.150.240 20 86 2.1E-54 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ambt_06605 916acd79b2e3b500ced564d3742190f8 218 Gene3D G3DSA:3.40.50.1000 8 193 2.1E-54 T 13-10-2018 IPR023214 HAD superfamily ambt_06605 916acd79b2e3b500ced564d3742190f8 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 184 1.8E-26 T 13-10-2018 ambt_06605 916acd79b2e3b500ced564d3742190f8 218 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 8 185 3.5E-19 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_06605 916acd79b2e3b500ced564d3742190f8 218 SUPERFAMILY SSF56784 7 208 2.42E-47 T 13-10-2018 IPR036412 HAD-like superfamily ambt_04220 c34297ab56a5d639ab02ee2ec55f7554 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 ambt_04220 c34297ab56a5d639ab02ee2ec55f7554 112 SUPERFAMILY SSF54913 1 112 1.28E-45 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta ambt_04220 c34297ab56a5d639ab02ee2ec55f7554 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 ambt_04220 c34297ab56a5d639ab02ee2ec55f7554 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.5E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_04220 c34297ab56a5d639ab02ee2ec55f7554 112 PIRSF PIRSF039144 1 112 9.2E-57 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_04220 c34297ab56a5d639ab02ee2ec55f7554 112 PRINTS PR00340 P-II protein signature 52 75 5.0E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_04220 c34297ab56a5d639ab02ee2ec55f7554 112 PRINTS PR00340 P-II protein signature 23 41 5.0E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_04220 c34297ab56a5d639ab02ee2ec55f7554 112 PRINTS PR00340 P-II protein signature 2 17 5.0E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_04220 c34297ab56a5d639ab02ee2ec55f7554 112 PRINTS PR00340 P-II protein signature 83 103 5.0E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_04220 c34297ab56a5d639ab02ee2ec55f7554 112 Gene3D G3DSA:3.30.70.120 1 112 2.2E-48 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ambt_04220 c34297ab56a5d639ab02ee2ec55f7554 112 SMART SM00938 4 105 3.2E-67 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_02100 c0341e42e54116b1e434f71702bd2c84 675 Gene3D G3DSA:1.10.287.130 468 525 3.9E-31 T 13-10-2018 ambt_02100 c0341e42e54116b1e434f71702bd2c84 675 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 5 671 3.1E-178 T 13-10-2018 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative ambt_02100 c0341e42e54116b1e434f71702bd2c84 675 Gene3D G3DSA:3.30.565.10 526 671 3.9E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_02100 c0341e42e54116b1e434f71702bd2c84 675 SUPERFAMILY SSF55874 535 672 2.49E-24 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_02100 c0341e42e54116b1e434f71702bd2c84 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 634 1.0E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_02100 c0341e42e54116b1e434f71702bd2c84 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 654 1.0E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_02100 c0341e42e54116b1e434f71702bd2c84 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 673 1.0E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_02100 c0341e42e54116b1e434f71702bd2c84 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 619 1.0E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_02100 c0341e42e54116b1e434f71702bd2c84 675 SMART SM00387 566 675 5.0E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_02100 c0341e42e54116b1e434f71702bd2c84 675 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 568 672 1.1E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_17350 738476130178d23a91083a1e70acf90d 730 Gene3D G3DSA:3.10.620.30 276 418 1.4E-39 T 13-10-2018 ambt_17350 738476130178d23a91083a1e70acf90d 730 SUPERFAMILY SSF48452 641 726 1.45E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_17350 738476130178d23a91083a1e70acf90d 730 Gene3D G3DSA:1.25.40.10 629 730 1.9E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_17350 738476130178d23a91083a1e70acf90d 730 SUPERFAMILY SSF54001 261 396 3.78E-12 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ambt_17350 738476130178d23a91083a1e70acf90d 730 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 67 237 1.8E-26 T 13-10-2018 IPR024618 Domain of unknown function DUF3857 ambt_17350 738476130178d23a91083a1e70acf90d 730 Gene3D G3DSA:2.60.40.3140 56 260 2.7E-12 T 13-10-2018 ambt_17350 738476130178d23a91083a1e70acf90d 730 Pfam PF01841 Transglutaminase-like superfamily 285 358 1.2E-9 T 13-10-2018 IPR002931 Transglutaminase-like ambt_02095 e2f466b010cfe9414a3e3ecc214cbe9c 374 Gene3D G3DSA:3.40.47.10 219 374 5.0E-38 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_02095 e2f466b010cfe9414a3e3ecc214cbe9c 374 Gene3D G3DSA:3.40.47.10 1 215 6.4E-54 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_02095 e2f466b010cfe9414a3e3ecc214cbe9c 374 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 283 372 9.2E-20 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ambt_02095 e2f466b010cfe9414a3e3ecc214cbe9c 374 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 151 218 1.6E-17 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ambt_02095 e2f466b010cfe9414a3e3ecc214cbe9c 374 SUPERFAMILY SSF53901 4 372 1.21E-49 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_19795 22dca00be4eca44ceffce56f2abc8e11 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 83 1.2E-17 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_19795 22dca00be4eca44ceffce56f2abc8e11 205 Gene3D G3DSA:3.40.30.10 4 201 3.7E-64 T 13-10-2018 ambt_19795 22dca00be4eca44ceffce56f2abc8e11 205 Pfam PF00043 Glutathione S-transferase, C-terminal domain 140 200 2.7E-11 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_19795 22dca00be4eca44ceffce56f2abc8e11 205 SUPERFAMILY SSF47616 81 204 1.02E-23 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_19795 22dca00be4eca44ceffce56f2abc8e11 205 Gene3D G3DSA:1.20.1050.10 85 200 3.7E-64 T 13-10-2018 ambt_19795 22dca00be4eca44ceffce56f2abc8e11 205 SUPERFAMILY SSF52833 1 92 5.03E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_06795 496021ca783111addff123cbd3fb5b3c 762 Pfam PF04055 Radical SAM superfamily 381 584 3.9E-20 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_06795 496021ca783111addff123cbd3fb5b3c 762 Pfam PF08497 Radical SAM N-terminal 27 380 1.4E-142 T 13-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal ambt_06795 496021ca783111addff123cbd3fb5b3c 762 Pfam PF11842 Domain of unknown function (DUF3362) 595 740 3.7E-43 T 13-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal ambt_06795 496021ca783111addff123cbd3fb5b3c 762 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 381 401 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ambt_06795 496021ca783111addff123cbd3fb5b3c 762 SMART SM00729 377 628 6.4E-7 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ambt_06795 496021ca783111addff123cbd3fb5b3c 762 Gene3D G3DSA:3.80.30.20 377 645 1.8E-15 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ambt_06795 496021ca783111addff123cbd3fb5b3c 762 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 27 645 6.4E-261 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 ambt_06795 496021ca783111addff123cbd3fb5b3c 762 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 27 647 49.048 T 13-10-2018 IPR022946 Uncharacterised protein family UPF0313 ambt_06795 496021ca783111addff123cbd3fb5b3c 762 SUPERFAMILY SSF102114 365 614 3.66E-11 T 13-10-2018 ambt_00435 b33a0149d78b164a81b7186796aedfd9 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 115 202 4.9E-28 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ambt_00435 b33a0149d78b164a81b7186796aedfd9 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 4 107 1.8E-25 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 ambt_00435 b33a0149d78b164a81b7186796aedfd9 206 Gene3D G3DSA:1.10.287.460 3 66 2.6E-20 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 ambt_00435 b33a0149d78b164a81b7186796aedfd9 206 SUPERFAMILY SSF54534 6 204 3.93E-56 T 13-10-2018 ambt_00435 b33a0149d78b164a81b7186796aedfd9 206 Gene3D G3DSA:3.10.50.40 67 205 3.9E-53 T 13-10-2018 ambt_17425 d1525d78c24404226e9ac89557c04ab8 160 Pfam PF11736 Protein of unknown function (DUF3299) 33 156 3.5E-40 T 13-10-2018 IPR021727 Protein of unknown function DUF3299 ambt_17425 d1525d78c24404226e9ac89557c04ab8 160 Gene3D G3DSA:2.40.50.870 26 160 1.3E-44 T 13-10-2018 ambt_16050 eacfc7e3ee7d372721a15bc66f9a0a8a 270 Gene3D G3DSA:1.20.120.1490 38 141 7.1E-10 T 13-10-2018 ambt_16050 eacfc7e3ee7d372721a15bc66f9a0a8a 270 Pfam PF07813 LTXXQ motif family protein 42 127 9.8E-6 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 ambt_16050 eacfc7e3ee7d372721a15bc66f9a0a8a 270 Pfam PF07813 LTXXQ motif family protein 164 252 2.2E-5 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 ambt_16050 eacfc7e3ee7d372721a15bc66f9a0a8a 270 Gene3D G3DSA:1.20.120.1490 161 265 1.7E-14 T 13-10-2018 ambt_08885 27dfd1df4cff8f5d986accd2c097fe34 232 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 ambt_08885 27dfd1df4cff8f5d986accd2c097fe34 232 Gene3D G3DSA:3.40.50.360 2 230 8.4E-53 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_08885 27dfd1df4cff8f5d986accd2c097fe34 232 Pfam PF03358 NADPH-dependent FMN reductase 11 153 1.9E-8 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ambt_08885 27dfd1df4cff8f5d986accd2c097fe34 232 SUPERFAMILY SSF52218 1 220 3.84E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_15870 9bd0ba573e541a02af46e7f84d558b57 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.1E-39 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ambt_15870 9bd0ba573e541a02af46e7f84d558b57 108 Pfam PF00085 Thioredoxin 5 106 2.6E-34 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 ambt_15870 9bd0ba573e541a02af46e7f84d558b57 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 13-10-2018 ambt_15870 9bd0ba573e541a02af46e7f84d558b57 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 13-10-2018 ambt_15870 9bd0ba573e541a02af46e7f84d558b57 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 13-10-2018 ambt_15870 9bd0ba573e541a02af46e7f84d558b57 108 SUPERFAMILY SSF52833 2 108 4.5E-40 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_15870 9bd0ba573e541a02af46e7f84d558b57 108 PIRSF PIRSF000077 2 108 1.6E-45 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ambt_15870 9bd0ba573e541a02af46e7f84d558b57 108 Gene3D G3DSA:3.40.30.10 1 108 3.6E-37 T 13-10-2018 ambt_15870 9bd0ba573e541a02af46e7f84d558b57 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ambt_17635 c9b40625213342b846d02f96f9aad268 235 Pfam PF08808 RES domain 42 184 1.3E-21 T 13-10-2018 IPR014914 RES domain ambt_17635 c9b40625213342b846d02f96f9aad268 235 SMART SM00953 48 185 3.0E-27 T 13-10-2018 IPR014914 RES domain ambt_05575 91856aaa27073e8e4733edf9d4546888 181 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 168 179 - T 13-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ambt_05575 91856aaa27073e8e4733edf9d4546888 181 Gene3D G3DSA:2.60.40.200 29 181 3.5E-50 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ambt_05575 91856aaa27073e8e4733edf9d4546888 181 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 41 179 3.5E-34 T 13-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ambt_05575 91856aaa27073e8e4733edf9d4546888 181 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 72 82 - T 13-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ambt_05575 91856aaa27073e8e4733edf9d4546888 181 SUPERFAMILY SSF49329 36 179 1.57E-49 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ambt_05645 8de5f426371914422b3a61130bbe4fd0 341 Pfam PF13377 Periplasmic binding protein-like domain 171 332 5.3E-31 T 13-10-2018 ambt_05645 8de5f426371914422b3a61130bbe4fd0 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 2.0E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_05645 8de5f426371914422b3a61130bbe4fd0 341 Gene3D G3DSA:3.40.50.2300 65 324 1.6E-65 T 13-10-2018 ambt_05645 8de5f426371914422b3a61130bbe4fd0 341 SUPERFAMILY SSF47413 2 62 6.39E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_05645 8de5f426371914422b3a61130bbe4fd0 341 Gene3D G3DSA:1.10.260.40 1 62 4.4E-20 T 13-10-2018 ambt_05645 8de5f426371914422b3a61130bbe4fd0 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 13-10-2018 ambt_05645 8de5f426371914422b3a61130bbe4fd0 341 SUPERFAMILY SSF53822 63 336 2.36E-59 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_05645 8de5f426371914422b3a61130bbe4fd0 341 SMART SM00354 3 74 9.0E-32 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_05645 8de5f426371914422b3a61130bbe4fd0 341 Gene3D G3DSA:3.40.50.2300 163 327 1.6E-65 T 13-10-2018 ambt_07230 cad6a1b8efdc775dd66368a4dad387a6 308 Pfam PF05425 Copper resistance protein D 202 300 2.1E-15 T 13-10-2018 IPR008457 Copper resistance protein D GO:0016021 ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 SUPERFAMILY SSF51306 73 299 3.4E-71 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 139 151 1.3E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 75 91 1.3E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 234 253 1.3E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 ProSitePatterns PS00501 Signal peptidases I serine active site. 84 91 - T 13-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 Gene3D G3DSA:2.170.230.10 150 233 2.8E-75 T 13-10-2018 ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 62 274 2.2E-47 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 ProSitePatterns PS00760 Signal peptidases I lysine active site. 141 153 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 Pfam PF00717 Peptidase S24-like 81 161 3.8E-22 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 ProSitePatterns PS00761 Signal peptidases I signature 3. 239 252 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 Gene3D G3DSA:2.10.109.10 73 274 2.8E-75 T 13-10-2018 ambt_04285 2e82c33a80b009d4e0b78c43a1a19cd6 301 Pfam PF10502 Signal peptidase, peptidase S26 231 271 1.0E-5 T 13-10-2018 IPR019533 Peptidase S26 ambt_04615 bb51ccdb5d7a9ab360cb98d4405fe904 213 Gene3D G3DSA:2.170.230.10 102 154 4.8E-44 T 13-10-2018 ambt_04615 bb51ccdb5d7a9ab360cb98d4405fe904 213 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 5.3E-18 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ambt_04615 bb51ccdb5d7a9ab360cb98d4405fe904 213 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 155 174 5.3E-18 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ambt_04615 bb51ccdb5d7a9ab360cb98d4405fe904 213 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 91 103 5.3E-18 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ambt_04615 bb51ccdb5d7a9ab360cb98d4405fe904 213 Pfam PF00717 Peptidase S24-like 34 113 3.1E-16 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ambt_04615 bb51ccdb5d7a9ab360cb98d4405fe904 213 SUPERFAMILY SSF51306 26 205 7.19E-50 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ambt_04615 bb51ccdb5d7a9ab360cb98d4405fe904 213 ProSitePatterns PS00761 Signal peptidases I signature 3. 160 173 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 ambt_04615 bb51ccdb5d7a9ab360cb98d4405fe904 213 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 15 195 1.0E-42 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ambt_04615 bb51ccdb5d7a9ab360cb98d4405fe904 213 Gene3D G3DSA:2.10.109.10 26 194 4.8E-44 T 13-10-2018 ambt_13960 0b7d4936ede924240c549560c972d19f 345 PRINTS PR00142 RecA protein signature 127 156 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ambt_13960 0b7d4936ede924240c549560c972d19f 345 PRINTS PR00142 RecA protein signature 210 238 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ambt_13960 0b7d4936ede924240c549560c972d19f 345 PRINTS PR00142 RecA protein signature 243 272 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ambt_13960 0b7d4936ede924240c549560c972d19f 345 PRINTS PR00142 RecA protein signature 165 194 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ambt_13960 0b7d4936ede924240c549560c972d19f 345 PRINTS PR00142 RecA protein signature 93 122 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ambt_13960 0b7d4936ede924240c549560c972d19f 345 PRINTS PR00142 RecA protein signature 297 314 3.3E-84 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ambt_13960 0b7d4936ede924240c549560c972d19f 345 SMART SM00382 57 228 1.1E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13960 0b7d4936ede924240c549560c972d19f 345 SUPERFAMILY SSF54752 268 324 7.33E-21 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal ambt_13960 0b7d4936ede924240c549560c972d19f 345 SUPERFAMILY SSF52540 4 267 5.18E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13960 0b7d4936ede924240c549560c972d19f 345 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 323 8.3E-173 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ambt_13960 0b7d4936ede924240c549560c972d19f 345 ProSitePatterns PS00321 recA signature. 213 221 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 ambt_13960 0b7d4936ede924240c549560c972d19f 345 Hamap MF_00268 Protein RecA [recA]. 5 329 51.203 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ambt_13960 0b7d4936ede924240c549560c972d19f 345 Gene3D G3DSA:3.40.50.300 26 267 5.4E-82 T 13-10-2018 ambt_13960 0b7d4936ede924240c549560c972d19f 345 Pfam PF00154 recA bacterial DNA recombination protein 7 268 3.1E-144 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ambt_13960 0b7d4936ede924240c549560c972d19f 345 Gene3D G3DSA:3.30.250.10 268 343 2.2E-27 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal ambt_13140 6b22bc12d3f61839084bf2789108c96f 663 SUPERFAMILY SSF58104 354 663 2.35E-74 T 13-10-2018 ambt_13140 6b22bc12d3f61839084bf2789108c96f 663 SMART SM00304 332 386 9.3E-14 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_13140 6b22bc12d3f61839084bf2789108c96f 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 460 628 2.1E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_13140 6b22bc12d3f61839084bf2789108c96f 663 Pfam PF02743 Cache domain 30 294 1.7E-28 T 13-10-2018 IPR033479 Double Cache domain 1 ambt_13140 6b22bc12d3f61839084bf2789108c96f 663 Pfam PF00672 HAMP domain 334 382 6.0E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_13140 6b22bc12d3f61839084bf2789108c96f 663 SUPERFAMILY SSF103190 128 201 1.18E-5 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ambt_13140 6b22bc12d3f61839084bf2789108c96f 663 Gene3D G3DSA:3.30.450.20 97 192 1.9E-25 T 13-10-2018 ambt_13140 6b22bc12d3f61839084bf2789108c96f 663 Gene3D G3DSA:1.10.287.950 331 663 2.4E-73 T 13-10-2018 ambt_13140 6b22bc12d3f61839084bf2789108c96f 663 Gene3D G3DSA:3.30.450.20 193 306 1.9E-25 T 13-10-2018 ambt_13140 6b22bc12d3f61839084bf2789108c96f 663 SMART SM00283 401 662 4.3E-69 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 466 534 1.7E-31 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 Gene3D G3DSA:1.10.8.60 388 458 2.8E-24 T 13-10-2018 ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 Pfam PF11638 DnaA N-terminal domain 1 62 1.1E-21 T 13-10-2018 IPR024633 DnaA N-terminal domain ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 556 34.363 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 353 380 6.5E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 319 333 6.5E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 287 301 6.5E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 515 534 6.5E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 255 275 6.5E-54 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 SUPERFAMILY SSF52540 222 433 1.23E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 SUPERFAMILY SSF48295 454 556 1.23E-36 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 SMART SM00760 465 534 2.1E-44 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 555 4.7E-185 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 Gene3D G3DSA:3.40.50.300 220 387 3.9E-49 T 13-10-2018 ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 SMART SM00382 254 456 1.2E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 Gene3D G3DSA:3.30.300.180 1 105 6.1E-32 T 13-10-2018 IPR038454 DnaA, N-terminal domain superfamily ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 ProSitePatterns PS01008 DnaA protein signature. 515 534 - T 13-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 Gene3D G3DSA:1.10.1750.10 464 557 5.4E-38 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 ambt_00005 9873ceab0276ed0548660cc0bf093ade 557 Pfam PF00308 Bacterial dnaA protein 223 439 4.4E-99 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 Pfam PF08662 Eukaryotic translation initiation factor eIF2A 79 236 3.0E-6 T 13-10-2018 IPR013979 Translation initiation factor, beta propellor-like domain ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 SMART SM00320 198 236 0.092 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 SMART SM00320 115 154 4.6 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 SMART SM00320 29 68 6.4 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 SMART SM00320 71 112 44.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 SMART SM00320 241 280 0.072 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 SMART SM00320 156 195 5.7E-5 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 SMART SM00320 291 329 180.0 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 Pfam PF00400 WD domain, G-beta repeat 256 280 0.17 T 13-10-2018 IPR001680 WD40 repeat GO:0005515 ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 Gene3D G3DSA:2.130.10.10 160 332 2.3E-29 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 Gene3D G3DSA:2.130.10.10 16 159 6.8E-14 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_21525 56e5775cf3f8f1247d8bdfd002de5d7c 332 SUPERFAMILY SSF50978 32 329 1.92E-47 T 13-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 ambt_13645 7709c95f3eb45ab5f556442cc33ac769 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 381 38.684 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 ambt_13645 7709c95f3eb45ab5f556442cc33ac769 382 Gene3D G3DSA:3.40.50.2000 201 310 1.7E-5 T 13-10-2018 ambt_13645 7709c95f3eb45ab5f556442cc33ac769 382 SUPERFAMILY SSF53756 6 354 1.57E-32 T 13-10-2018 ambt_13645 7709c95f3eb45ab5f556442cc33ac769 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 378 9.1E-119 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 ambt_13645 7709c95f3eb45ab5f556442cc33ac769 382 Pfam PF02684 Lipid-A-disaccharide synthetase 7 376 9.4E-115 T 13-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 ambt_18535 f0f11bee00cd4fc9a883ae26b71c522d 293 Gene3D G3DSA:1.10.1040.10 164 293 4.4E-40 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ambt_18535 f0f11bee00cd4fc9a883ae26b71c522d 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 293 1.9E-35 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ambt_18535 f0f11bee00cd4fc9a883ae26b71c522d 293 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 ambt_18535 f0f11bee00cd4fc9a883ae26b71c522d 293 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 7 292 3.2E-118 T 13-10-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 ambt_18535 f0f11bee00cd4fc9a883ae26b71c522d 293 SUPERFAMILY SSF48179 162 292 9.75E-37 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_18535 f0f11bee00cd4fc9a883ae26b71c522d 293 SUPERFAMILY SSF51735 3 163 1.06E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_18535 f0f11bee00cd4fc9a883ae26b71c522d 293 Gene3D G3DSA:3.40.50.720 1 163 7.9E-56 T 13-10-2018 ambt_18535 f0f11bee00cd4fc9a883ae26b71c522d 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 161 5.5E-50 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ambt_18535 f0f11bee00cd4fc9a883ae26b71c522d 293 PIRSF PIRSF000103 1 293 1.6E-75 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ambt_09120 a47b2c74c1cc34a64289cb4c6530fc28 418 Gene3D G3DSA:2.40.30.170 59 311 4.7E-52 T 13-10-2018 ambt_09120 a47b2c74c1cc34a64289cb4c6530fc28 418 Gene3D G3DSA:1.10.287.470 106 180 4.7E-52 T 13-10-2018 ambt_09120 a47b2c74c1cc34a64289cb4c6530fc28 418 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 379 1.0E-44 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_09120 a47b2c74c1cc34a64289cb4c6530fc28 418 Gene3D G3DSA:2.40.50.100 69 214 4.7E-52 T 13-10-2018 ambt_09120 a47b2c74c1cc34a64289cb4c6530fc28 418 Pfam PF13437 HlyD family secretion protein 184 298 1.2E-13 T 13-10-2018 ambt_09120 a47b2c74c1cc34a64289cb4c6530fc28 418 Gene3D G3DSA:2.40.420.20 312 377 4.7E-52 T 13-10-2018 ambt_09120 a47b2c74c1cc34a64289cb4c6530fc28 418 SUPERFAMILY SSF111369 59 305 4.32E-22 T 13-10-2018 ambt_18695 7ed6b6812ab3b55b7023120e07345e22 238 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 32 235 1.2E-51 T 13-10-2018 ambt_18695 7ed6b6812ab3b55b7023120e07345e22 238 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 237 32.291 T 13-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 ambt_18695 7ed6b6812ab3b55b7023120e07345e22 238 Gene3D G3DSA:1.10.510.10 145 238 1.0E-13 T 13-10-2018 ambt_18695 7ed6b6812ab3b55b7023120e07345e22 238 SUPERFAMILY SSF56112 48 192 2.02E-16 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_19030 1f34af3bc1c56e41c5f9392451599909 638 Pfam PF05045 Rhamnan synthesis protein F 122 359 8.7E-55 T 13-10-2018 IPR007739 Rhamnan synthesis F ambt_19030 1f34af3bc1c56e41c5f9392451599909 638 Gene3D G3DSA:1.10.150.400 410 492 1.9E-11 T 13-10-2018 ambt_19030 1f34af3bc1c56e41c5f9392451599909 638 Gene3D G3DSA:3.40.50.1000 399 595 1.9E-11 T 13-10-2018 IPR023214 HAD superfamily ambt_19030 1f34af3bc1c56e41c5f9392451599909 638 SUPERFAMILY SSF56784 400 601 4.87E-9 T 13-10-2018 IPR036412 HAD-like superfamily ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 SMART SM00283 199 404 1.3E-18 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 123 232 1.7E-10 T 13-10-2018 IPR000014 PAS domain ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 Pfam PF13426 PAS domain 7 106 0.055 T 13-10-2018 IPR000014 PAS domain ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 SUPERFAMILY SSF55785 6 107 1.16E-8 T 13-10-2018 IPR035965 PAS domain superfamily ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 272 402 2.8E-39 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 Gene3D G3DSA:3.30.450.20 122 223 2.3E-19 T 13-10-2018 ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 SUPERFAMILY SSF58104 201 402 2.49E-50 T 13-10-2018 ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 Gene3D G3DSA:1.10.287.950 224 404 1.7E-43 T 13-10-2018 ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 Pfam PF08447 PAS fold 137 220 2.9E-12 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 Gene3D G3DSA:3.30.450.20 4 111 2.4E-5 T 13-10-2018 ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 SMART SM00086 67 107 120.0 T 13-10-2018 IPR001610 PAC motif ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 SMART SM00086 185 227 0.0041 T 13-10-2018 IPR001610 PAC motif ambt_14260 eb7ae848c37feff97f9b5dbc7d0e5c5e 404 SUPERFAMILY SSF55785 124 229 7.85E-22 T 13-10-2018 IPR035965 PAS domain superfamily ambt_11860 43f64f19ebc644a39b503d7ae739d1fc 499 Pfam PF08443 RimK-like ATP-grasp domain 305 470 1.5E-9 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 ambt_11860 43f64f19ebc644a39b503d7ae739d1fc 499 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 25 153 2.7E-32 T 13-10-2018 IPR025839 RimK-like ATPgrasp N-terminal domain ambt_11860 43f64f19ebc644a39b503d7ae739d1fc 499 Gene3D G3DSA:3.30.1490.20 310 376 1.5E-8 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ambt_11860 43f64f19ebc644a39b503d7ae739d1fc 499 Gene3D G3DSA:3.30.470.20 377 493 6.6E-21 T 13-10-2018 ambt_11860 43f64f19ebc644a39b503d7ae739d1fc 499 SUPERFAMILY SSF56059 285 491 2.79E-39 T 13-10-2018 ambt_11285 1d4cd6a31719d8a8214c4cd2e517fade 435 Gene3D G3DSA:3.40.50.2000 96 414 6.2E-44 T 13-10-2018 ambt_11285 1d4cd6a31719d8a8214c4cd2e517fade 435 SUPERFAMILY SSF53756 96 421 2.0E-56 T 13-10-2018 ambt_11285 1d4cd6a31719d8a8214c4cd2e517fade 435 Pfam PF00534 Glycosyl transferases group 1 241 381 2.0E-27 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_11285 1d4cd6a31719d8a8214c4cd2e517fade 435 Gene3D G3DSA:3.40.50.2000 225 404 6.2E-44 T 13-10-2018 ambt_04315 f510066094a3ef5ee50bfc37d67175a5 331 Pfam PF12710 haloacid dehalogenase-like hydrolase 129 295 7.2E-15 T 13-10-2018 ambt_04315 f510066094a3ef5ee50bfc37d67175a5 331 SUPERFAMILY SSF56784 126 330 2.27E-47 T 13-10-2018 IPR036412 HAD-like superfamily ambt_04315 f510066094a3ef5ee50bfc37d67175a5 331 Gene3D G3DSA:3.40.50.1000 58 331 2.8E-73 T 13-10-2018 IPR023214 HAD superfamily ambt_04315 f510066094a3ef5ee50bfc37d67175a5 331 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 127 297 8.1E-29 T 13-10-2018 ambt_04315 f510066094a3ef5ee50bfc37d67175a5 331 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 116 329 1.2E-76 T 13-10-2018 ambt_04205 87ee36bd123074526fb7e576e2d8d2eb 128 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04205 87ee36bd123074526fb7e576e2d8d2eb 128 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 32 7.0E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04205 87ee36bd123074526fb7e576e2d8d2eb 128 Gene3D G3DSA:3.30.700.10 14 124 1.6E-14 T 13-10-2018 ambt_04205 87ee36bd123074526fb7e576e2d8d2eb 128 PRINTS PR00813 Bacterial general secretion pathway protein G signature 12 37 1.3E-5 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ambt_04205 87ee36bd123074526fb7e576e2d8d2eb 128 PRINTS PR00813 Bacterial general secretion pathway protein G signature 48 66 1.3E-5 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ambt_04205 87ee36bd123074526fb7e576e2d8d2eb 128 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 33 4.6E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04205 87ee36bd123074526fb7e576e2d8d2eb 128 SUPERFAMILY SSF54523 14 120 1.49E-13 T 13-10-2018 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 SUPERFAMILY SSF48150 8 229 8.79E-78 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 Pfam PF14815 NUDIX domain 245 348 2.6E-20 T 13-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 Pfam PF00633 Helix-hairpin-helix motif 104 132 2.5E-6 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 Gene3D G3DSA:3.90.79.10 228 351 6.7E-13 T 13-10-2018 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 196 212 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 173 3.5E-21 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 Gene3D G3DSA:1.10.340.30 25 136 1.8E-88 T 13-10-2018 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 Gene3D G3DSA:1.10.1670.10 13 215 1.8E-88 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 196 212 4.6E-5 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 SMART SM00525 195 215 2.7E-6 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 SMART SM00478 43 194 1.7E-47 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 SUPERFAMILY SSF55811 224 349 4.46E-22 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ambt_17060 e3af3e693fdde77e428c187853018d1c 353 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 10 272 3.0E-116 T 13-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 SMART SM00474 336 523 1.1E-42 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 SUPERFAMILY SSF56672 529 935 1.67E-159 T 13-10-2018 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 SMART SM00279 173 208 4.7E-10 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 SMART SM00482 692 899 7.8E-118 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 Pfam PF00476 DNA polymerase family A 556 933 2.1E-156 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 SUPERFAMILY SSF47807 171 293 2.54E-26 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 SMART SM00475 5 268 6.3E-122 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 SUPERFAMILY SSF53098 339 523 1.66E-56 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.2E-55 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 Gene3D G3DSA:3.30.70.370 670 931 4.2E-114 T 13-10-2018 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 TIGRFAM TIGR00593 pola: DNA polymerase I 10 935 4.8E-287 T 13-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 PRINTS PR00868 DNA-polymerase family A (pol I) signature 797 808 2.2E-80 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 PRINTS PR00868 DNA-polymerase family A (pol I) signature 819 830 2.2E-80 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 PRINTS PR00868 DNA-polymerase family A (pol I) signature 851 867 2.2E-80 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 PRINTS PR00868 DNA-polymerase family A (pol I) signature 760 785 2.2E-80 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 PRINTS PR00868 DNA-polymerase family A (pol I) signature 661 683 2.2E-80 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 PRINTS PR00868 DNA-polymerase family A (pol I) signature 706 729 2.2E-80 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 PRINTS PR00868 DNA-polymerase family A (pol I) signature 736 749 2.2E-80 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 PRINTS PR00868 DNA-polymerase family A (pol I) signature 882 895 2.2E-80 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 PRINTS PR00868 DNA-polymerase family A (pol I) signature 684 699 2.2E-80 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 Gene3D G3DSA:1.10.150.20 715 858 4.2E-114 T 13-10-2018 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 SUPERFAMILY SSF88723 3 170 1.15E-57 T 13-10-2018 IPR029060 PIN-like domain superfamily ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 Gene3D G3DSA:1.10.150.20 174 253 8.5E-93 T 13-10-2018 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 ProSitePatterns PS00447 DNA polymerase family A signature. 760 779 - T 13-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 Gene3D G3DSA:1.20.1060.10 549 664 7.8E-42 T 13-10-2018 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 Gene3D G3DSA:3.40.50.1010 10 284 8.5E-93 T 13-10-2018 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 Gene3D G3DSA:3.30.420.10 333 548 4.3E-67 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 268 1.5E-25 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 ambt_00065 a13a1b94bebc2d2bf649cb908b2eac15 935 Pfam PF01612 3'-5' exonuclease 337 523 1.8E-41 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ambt_00070 0ecb0462b1cf7a984e692bc853b63ec0 217 SUPERFAMILY SSF52317 1 216 4.91E-61 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_00070 0ecb0462b1cf7a984e692bc853b63ec0 217 Gene3D G3DSA:3.40.50.880 1 217 4.0E-89 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_00070 0ecb0462b1cf7a984e692bc853b63ec0 217 PIRSF PIRSF006320 1 217 2.1E-100 T 13-10-2018 IPR026041 Glyoxalase ElbB ambt_08355 9a89623926f11d8a0d43b743f2c55456 699 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 456 698 1.6E-104 T 13-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain ambt_08355 9a89623926f11d8a0d43b743f2c55456 699 Pfam PF13847 Methyltransferase domain 495 633 2.4E-9 T 13-10-2018 IPR025714 Methyltransferase domain ambt_08355 9a89623926f11d8a0d43b743f2c55456 699 Pfam PF12867 DinB superfamily 30 160 1.3E-9 T 13-10-2018 IPR024775 DinB-like domain ambt_08355 9a89623926f11d8a0d43b743f2c55456 699 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 6 443 2.7E-204 T 13-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase ambt_08355 9a89623926f11d8a0d43b743f2c55456 699 Gene3D G3DSA:3.90.1580.10 187 453 4.1E-24 T 13-10-2018 ambt_08355 9a89623926f11d8a0d43b743f2c55456 699 SUPERFAMILY SSF53335 486 642 4.52E-22 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_08355 9a89623926f11d8a0d43b743f2c55456 699 Pfam PF03781 Sulfatase-modifying factor enzyme 1 194 443 8.4E-26 T 13-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ambt_08355 9a89623926f11d8a0d43b743f2c55456 699 Gene3D G3DSA:3.40.50.150 454 692 1.8E-23 T 13-10-2018 ambt_08355 9a89623926f11d8a0d43b743f2c55456 699 SUPERFAMILY SSF56436 192 443 1.96E-54 T 13-10-2018 IPR016187 C-type lectin fold ambt_17215 4dc97b9fe37f60f372cafad1d07c991a 557 Pfam PF07655 Secretin N-terminal domain 159 258 1.8E-27 T 13-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 ambt_17215 4dc97b9fe37f60f372cafad1d07c991a 557 SMART SM00965 107 155 0.0014 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ambt_17215 4dc97b9fe37f60f372cafad1d07c991a 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 287 297 3.2E-18 T 13-10-2018 IPR001775 GspD/PilQ family ambt_17215 4dc97b9fe37f60f372cafad1d07c991a 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 353 377 3.2E-18 T 13-10-2018 IPR001775 GspD/PilQ family ambt_17215 4dc97b9fe37f60f372cafad1d07c991a 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 499 517 3.2E-18 T 13-10-2018 IPR001775 GspD/PilQ family ambt_17215 4dc97b9fe37f60f372cafad1d07c991a 557 PRINTS PR00811 Bacterial general secretion pathway protein D signature 522 536 3.2E-18 T 13-10-2018 IPR001775 GspD/PilQ family ambt_17215 4dc97b9fe37f60f372cafad1d07c991a 557 Gene3D G3DSA:3.55.50.30 67 163 4.9E-8 T 13-10-2018 ambt_17215 4dc97b9fe37f60f372cafad1d07c991a 557 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 254 534 3.1E-83 T 13-10-2018 IPR013358 Pilus biogenesis, MshL ambt_17215 4dc97b9fe37f60f372cafad1d07c991a 557 Pfam PF00263 Bacterial type II and III secretion system protein 358 534 1.5E-39 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 ambt_02295 be9cabf6cf7ec131260897deaf0a33f1 176 SUPERFAMILY SSF50630 63 165 7.16E-18 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily ambt_02295 be9cabf6cf7ec131260897deaf0a33f1 176 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 59 174 1.3E-29 T 13-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal ambt_02295 be9cabf6cf7ec131260897deaf0a33f1 176 Gene3D G3DSA:2.40.70.10 52 175 5.5E-31 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily ambt_02295 be9cabf6cf7ec131260897deaf0a33f1 176 Pfam PF13975 gag-polyprotein putative aspartyl protease 74 161 2.2E-23 T 13-10-2018 ambt_02295 be9cabf6cf7ec131260897deaf0a33f1 176 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 83 94 - T 13-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 ambt_10630 c213652a61bec669b73528063e2de086 647 Pfam PF00563 EAL domain 423 640 8.0E-46 T 13-10-2018 IPR001633 EAL domain ambt_10630 c213652a61bec669b73528063e2de086 647 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 392 2.2E-12 T 13-10-2018 IPR000160 GGDEF domain ambt_10630 c213652a61bec669b73528063e2de086 647 Pfam PF16448 LapD/MoxY periplasmic domain 23 147 6.3E-42 T 13-10-2018 IPR032244 LapD/MoxY, periplasmic domain ambt_10630 c213652a61bec669b73528063e2de086 647 SUPERFAMILY SSF141868 411 641 3.53E-47 T 13-10-2018 IPR035919 EAL domain superfamily ambt_10630 c213652a61bec669b73528063e2de086 647 Gene3D G3DSA:3.30.1040.50 103 152 2.0E-12 T 13-10-2018 ambt_10630 c213652a61bec669b73528063e2de086 647 Gene3D G3DSA:3.30.70.270 221 395 3.1E-27 T 13-10-2018 ambt_10630 c213652a61bec669b73528063e2de086 647 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 388 1.1E-19 T 13-10-2018 IPR000160 GGDEF domain ambt_10630 c213652a61bec669b73528063e2de086 647 SMART SM00267 227 396 4.6E-12 T 13-10-2018 IPR000160 GGDEF domain ambt_10630 c213652a61bec669b73528063e2de086 647 SUPERFAMILY SSF55073 243 393 2.35E-17 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_10630 c213652a61bec669b73528063e2de086 647 SMART SM00052 404 645 3.2E-18 T 13-10-2018 IPR001633 EAL domain ambt_10630 c213652a61bec669b73528063e2de086 647 Gene3D G3DSA:3.20.20.450 402 642 6.6E-49 T 13-10-2018 IPR035919 EAL domain superfamily ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 Pfam PF00117 Glutamine amidotransferase class-I 194 369 2.0E-48 T 13-10-2018 IPR017926 Glutamine amidotransferase ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.7E-53 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 Gene3D G3DSA:3.40.50.880 152 375 7.1E-74 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 SMART SM01097 3 133 6.9E-92 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 SUPERFAMILY SSF52021 4 139 4.58E-57 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 SUPERFAMILY SSF52317 155 375 7.1E-61 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 Gene3D G3DSA:3.50.30.20 2 151 1.8E-60 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 372 1.7E-147 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 375 48.894 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 191 205 3.0E-40 T 13-10-2018 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 303 314 3.0E-40 T 13-10-2018 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 230 244 3.0E-40 T 13-10-2018 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 261 277 3.0E-40 T 13-10-2018 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 278 295 3.0E-40 T 13-10-2018 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 233 242 9.7E-11 T 13-10-2018 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 261 272 9.7E-11 T 13-10-2018 ambt_11475 4c7ca4877190814a2b7f8ce25d7585f4 376 PRINTS PR00096 Glutamine amidotransferase superfamily signature 346 359 9.7E-11 T 13-10-2018 ambt_10365 41a039dd460e53f6aa48b9b246dc032b 134 Pfam PF02657 Fe-S metabolism associated domain 13 132 3.0E-29 T 13-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like ambt_10365 41a039dd460e53f6aa48b9b246dc032b 134 SUPERFAMILY SSF82649 12 132 7.85E-25 T 13-10-2018 ambt_10365 41a039dd460e53f6aa48b9b246dc032b 134 Gene3D G3DSA:3.90.1010.10 1 134 5.2E-29 T 13-10-2018 ambt_09095 cdbe1c1f934c25c50a0ec96df8a051b5 600 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 34 1.3E-10 T 13-10-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ambt_09095 cdbe1c1f934c25c50a0ec96df8a051b5 600 SUPERFAMILY SSF56645 36 294 4.32E-47 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ambt_09095 cdbe1c1f934c25c50a0ec96df8a051b5 600 Gene3D G3DSA:1.10.540.10 11 158 1.6E-9 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ambt_09095 cdbe1c1f934c25c50a0ec96df8a051b5 600 SUPERFAMILY SSF47203 288 465 5.48E-39 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ambt_09095 cdbe1c1f934c25c50a0ec96df8a051b5 600 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 270 3.1E-14 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ambt_09095 cdbe1c1f934c25c50a0ec96df8a051b5 600 Gene3D G3DSA:1.20.140.10 289 457 2.2E-39 T 13-10-2018 ambt_09095 cdbe1c1f934c25c50a0ec96df8a051b5 600 Gene3D G3DSA:2.40.110.10 160 288 3.5E-24 T 13-10-2018 ambt_09095 cdbe1c1f934c25c50a0ec96df8a051b5 600 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 469 592 6.2E-25 T 13-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ambt_09095 cdbe1c1f934c25c50a0ec96df8a051b5 600 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 452 2.1E-17 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ambt_09095 cdbe1c1f934c25c50a0ec96df8a051b5 600 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 157 5.3E-6 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ambt_03955 4c601a61c2ed14e59e3c8decef34f4bb 372 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 355 2.3E-158 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ambt_03955 4c601a61c2ed14e59e3c8decef34f4bb 372 Pfam PF04055 Radical SAM superfamily 107 276 2.0E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_03955 4c601a61c2ed14e59e3c8decef34f4bb 372 SUPERFAMILY SSF102114 103 306 1.57E-14 T 13-10-2018 ambt_03955 4c601a61c2ed14e59e3c8decef34f4bb 372 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 351 72.885 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ambt_03955 4c601a61c2ed14e59e3c8decef34f4bb 372 Gene3D G3DSA:1.10.150.530 3 64 6.9E-25 T 13-10-2018 ambt_03955 4c601a61c2ed14e59e3c8decef34f4bb 372 PIRSF PIRSF006004 2 364 7.6E-143 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 ambt_03955 4c601a61c2ed14e59e3c8decef34f4bb 372 Gene3D G3DSA:3.20.20.70 65 336 1.6E-109 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_00655 bec58fa10657aa5a7821046bddb824c6 266 Pfam PF11101 Protein of unknown function (DUF2884) 28 257 3.5E-73 T 13-10-2018 IPR021307 Protein of unknown function DUF2884 ambt_01245 1f75e0842c5c61e52cb333b944a1ea71 274 SUPERFAMILY SSF161098 8 274 1.03E-61 T 13-10-2018 IPR035906 MetI-like superfamily ambt_01245 1f75e0842c5c61e52cb333b944a1ea71 274 Gene3D G3DSA:1.10.3720.10 2 266 1.0E-52 T 13-10-2018 IPR035906 MetI-like superfamily ambt_01245 1f75e0842c5c61e52cb333b944a1ea71 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 261 1.5E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 Gene3D G3DSA:3.30.470.20 87 432 1.9E-153 T 13-10-2018 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 SMART SM00878 336 441 1.7E-63 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.3E-44 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 SUPERFAMILY SSF56059 83 346 5.48E-68 T 13-10-2018 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 SUPERFAMILY SSF51246 331 444 5.76E-44 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 Gene3D G3DSA:3.40.50.20 1 85 1.8E-34 T 13-10-2018 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 3.6E-235 T 13-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 SUPERFAMILY SSF52440 1 113 1.01E-45 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 Gene3D G3DSA:3.30.1490.20 131 203 1.9E-153 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 6.5E-83 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_21045 d5a5e5b099e180e7f603dfda39350f11 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.8E-37 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ambt_01000 36e88c314bf65f5b58f0927a773980c0 258 SUPERFAMILY SSF49879 111 243 1.19E-14 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ambt_01000 36e88c314bf65f5b58f0927a773980c0 258 Pfam PF00498 FHA domain 166 236 1.9E-6 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_01000 36e88c314bf65f5b58f0927a773980c0 258 Gene3D G3DSA:2.60.200.20 118 244 3.6E-17 T 13-10-2018 ambt_01000 36e88c314bf65f5b58f0927a773980c0 258 SMART SM00240 164 219 0.0076 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_19765 f6d5f0cd871ed0d58453a0800151f335 533 SUPERFAMILY SSF50249 412 531 3.77E-31 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_19765 f6d5f0cd871ed0d58453a0800151f335 533 Pfam PF01068 ATP dependent DNA ligase domain 204 406 2.6E-29 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 ambt_19765 f6d5f0cd871ed0d58453a0800151f335 533 Pfam PF04679 ATP dependent DNA ligase C terminal region 427 516 4.5E-12 T 13-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 ambt_19765 f6d5f0cd871ed0d58453a0800151f335 533 Gene3D G3DSA:3.30.470.30 201 406 1.6E-41 T 13-10-2018 ambt_19765 f6d5f0cd871ed0d58453a0800151f335 533 Gene3D G3DSA:2.40.50.140 411 533 7.2E-31 T 13-10-2018 ambt_19765 f6d5f0cd871ed0d58453a0800151f335 533 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 531 4.3E-208 T 13-10-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family ambt_19765 f6d5f0cd871ed0d58453a0800151f335 533 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 224 232 - T 13-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 ambt_19765 f6d5f0cd871ed0d58453a0800151f335 533 SUPERFAMILY SSF56091 199 406 5.76E-45 T 13-10-2018 ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 SUPERFAMILY SSF52540 37 540 5.44E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 SUPERFAMILY SSF54211 568 761 2.09E-32 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 Pfam PF13654 AAA domain 36 543 1.4E-169 T 13-10-2018 ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 Gene3D G3DSA:3.40.50.300 13 180 1.3E-26 T 13-10-2018 ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 Gene3D G3DSA:3.40.50.300 246 455 1.6E-53 T 13-10-2018 ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 650 669 5.1E-11 T 13-10-2018 ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 710 728 5.1E-11 T 13-10-2018 ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 65 84 5.1E-11 T 13-10-2018 ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 569 585 5.1E-11 T 13-10-2018 ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 680 699 5.1E-11 T 13-10-2018 ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 Gene3D G3DSA:3.30.230.10 546 781 4.5E-89 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_09510 58703b777d6af1cd02b7746186f2ec97 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 653 759 1.1E-10 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 ambt_18760 9239903d208a6f699c98ae7f4de0f6e0 437 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 35 423 2.0E-146 T 13-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 ambt_18760 9239903d208a6f699c98ae7f4de0f6e0 437 SUPERFAMILY SSF52507 35 212 3.92E-60 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ambt_18760 9239903d208a6f699c98ae7f4de0f6e0 437 Gene3D G3DSA:3.40.50.1950 31 218 2.9E-59 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ambt_18760 9239903d208a6f699c98ae7f4de0f6e0 437 Pfam PF02441 Flavoprotein 38 210 3.0E-45 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 ambt_18760 9239903d208a6f699c98ae7f4de0f6e0 437 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 220 402 3.3E-71 T 13-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ambt_18760 9239903d208a6f699c98ae7f4de0f6e0 437 SUPERFAMILY SSF102645 218 431 3.4E-76 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ambt_18760 9239903d208a6f699c98ae7f4de0f6e0 437 Gene3D G3DSA:3.40.50.10300 219 436 8.2E-80 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.5E-155 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Gene3D G3DSA:2.120.10.90 534 860 1.2E-124 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 SUPERFAMILY SSF56719 30 520 4.45E-184 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Gene3D G3DSA:3.90.199.10 33 520 1.4E-233 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Gene3D G3DSA:1.10.268.10 369 492 1.4E-233 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 860 24.569 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 SMART SM00434 11 498 2.3E-297 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 3.4E-9 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 691 707 0.16 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 763 808 6.3E-14 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 1.7E-10 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 813 858 3.2E-11 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 584 1.5E-8 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 730 756 7.5E-6 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 Gene3D G3DSA:3.30.1360.40 236 332 1.4E-233 T 13-10-2018 ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 SUPERFAMILY SSF101904 532 865 3.79E-106 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ambt_08530 43a8ede6dc99818eabb095f4bc014fb5 898 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 859 0.0 T 13-10-2018 ambt_18315 2a6e7b22e78a4644a77be812a74ed6e0 90 Pfam PF01192 RNA polymerase Rpb6 10 59 1.2E-15 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ambt_18315 2a6e7b22e78a4644a77be812a74ed6e0 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.321 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_18315 2a6e7b22e78a4644a77be812a74ed6e0 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.5E-25 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_18315 2a6e7b22e78a4644a77be812a74ed6e0 90 SUPERFAMILY SSF63562 2 80 4.88E-25 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ambt_18315 2a6e7b22e78a4644a77be812a74ed6e0 90 SMART SM01409 8 61 1.3E-15 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ambt_18315 2a6e7b22e78a4644a77be812a74ed6e0 90 Gene3D G3DSA:3.90.940.10 1 90 1.5E-27 T 13-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 3.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 3.7E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 Gene3D G3DSA:3.30.2090.10 795 883 8.4E-143 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 SUPERFAMILY SSF82714 188 268 1.28E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 Gene3D G3DSA:1.20.1640.10 584 1097 8.4E-143 T 13-10-2018 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 Gene3D G3DSA:3.30.70.1430 40 131 4.2E-159 T 13-10-2018 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 Gene3D G3DSA:1.20.1640.10 10 522 4.2E-159 T 13-10-2018 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 SUPERFAMILY SSF82866 882 1103 7.59E-54 T 13-10-2018 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 Gene3D G3DSA:3.30.70.1440 748 940 8.4E-143 T 13-10-2018 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 Gene3D G3DSA:1.20.1640.10 523 560 4.2E-159 T 13-10-2018 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 SUPERFAMILY SSF82714 796 882 5.1E-14 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 Gene3D G3DSA:3.30.70.1320 132 329 4.2E-159 T 13-10-2018 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 SUPERFAMILY SSF82693 638 746 1.26E-5 T 13-10-2018 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 SUPERFAMILY SSF82866 294 508 2.22E-40 T 13-10-2018 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 Pfam PF00873 AcrB/AcrD/AcrF family 584 1100 4.6E-115 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 Pfam PF00873 AcrB/AcrD/AcrF family 4 523 6.3E-138 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 Gene3D G3DSA:3.30.2090.10 184 276 4.2E-159 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 Gene3D G3DSA:3.30.70.1430 638 747 8.4E-143 T 13-10-2018 ambt_09235 51a0745f17cc28c28280d2a1bd324797 1124 SUPERFAMILY SSF82693 41 131 7.85E-20 T 13-10-2018 ambt_00950 92243684bd7640e7f0f83d4dd3eb2389 668 SMART SM00304 165 218 8.2E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_00950 92243684bd7640e7f0f83d4dd3eb2389 668 Gene3D G3DSA:3.30.70.270 232 410 1.4E-56 T 13-10-2018 ambt_00950 92243684bd7640e7f0f83d4dd3eb2389 668 Pfam PF00563 EAL domain 416 649 3.1E-67 T 13-10-2018 IPR001633 EAL domain ambt_00950 92243684bd7640e7f0f83d4dd3eb2389 668 Gene3D G3DSA:3.20.20.450 411 663 9.7E-87 T 13-10-2018 IPR035919 EAL domain superfamily ambt_00950 92243684bd7640e7f0f83d4dd3eb2389 668 SMART SM00052 409 654 6.4E-97 T 13-10-2018 IPR001633 EAL domain ambt_00950 92243684bd7640e7f0f83d4dd3eb2389 668 SUPERFAMILY SSF141868 416 657 1.16E-82 T 13-10-2018 IPR035919 EAL domain superfamily ambt_00950 92243684bd7640e7f0f83d4dd3eb2389 668 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 397 5.7E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_00950 92243684bd7640e7f0f83d4dd3eb2389 668 SMART SM00267 227 399 3.5E-64 T 13-10-2018 IPR000160 GGDEF domain ambt_00950 92243684bd7640e7f0f83d4dd3eb2389 668 Pfam PF00990 Diguanylate cyclase, GGDEF domain 238 394 1.9E-47 T 13-10-2018 IPR000160 GGDEF domain ambt_00950 92243684bd7640e7f0f83d4dd3eb2389 668 SUPERFAMILY SSF55073 243 400 1.49E-46 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_07775 4722d4c3cf7578cba4e61d71a7d3498c 71 PIRSF PIRSF006188 1 71 2.8E-23 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 ambt_07775 4722d4c3cf7578cba4e61d71a7d3498c 71 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 9.0E-16 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 ambt_07775 4722d4c3cf7578cba4e61d71a7d3498c 71 Pfam PF07208 Protein of unknown function (DUF1414) 27 69 6.1E-21 T 13-10-2018 IPR009857 Uncharacterised protein family UPF0352 ambt_07775 4722d4c3cf7578cba4e61d71a7d3498c 71 Gene3D G3DSA:1.10.3390.10 1 71 1.9E-27 T 13-10-2018 IPR023202 YejL-like superfamily ambt_07775 4722d4c3cf7578cba4e61d71a7d3498c 71 SUPERFAMILY SSF158651 2 70 1.31E-24 T 13-10-2018 IPR023202 YejL-like superfamily ambt_08440 e1f8b82d075c00684ee7c0a20944cbcf 115 Gene3D G3DSA:1.10.10.370 45 115 2.9E-30 T 13-10-2018 ambt_08440 e1f8b82d075c00684ee7c0a20944cbcf 115 PIRSF PIRSF006223 8 115 4.6E-42 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE ambt_08440 e1f8b82d075c00684ee7c0a20944cbcf 115 Pfam PF04358 DsrC like protein 9 115 2.7E-43 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE ambt_08440 e1f8b82d075c00684ee7c0a20944cbcf 115 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 9 115 4.1E-47 T 13-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE ambt_08440 e1f8b82d075c00684ee7c0a20944cbcf 115 SUPERFAMILY SSF69721 6 115 7.46E-41 T 13-10-2018 IPR025526 DsrC-like domain superfamily ambt_08440 e1f8b82d075c00684ee7c0a20944cbcf 115 Gene3D G3DSA:3.30.1420.10 7 43 8.9E-8 T 13-10-2018 ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 Gene3D G3DSA:3.40.50.880 1 190 9.5E-55 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 1.8E-13 T 13-10-2018 ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.8E-13 T 13-10-2018 ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.8E-13 T 13-10-2018 ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.7E-33 T 13-10-2018 ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 PRINTS PR00097 Anthranilate synthase component II signature 168 181 3.7E-33 T 13-10-2018 ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.7E-33 T 13-10-2018 ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.7E-33 T 13-10-2018 ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.7E-33 T 13-10-2018 ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.7E-33 T 13-10-2018 ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 190 3.6E-72 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 Pfam PF00117 Glutamine amidotransferase class-I 3 189 1.6E-48 T 13-10-2018 IPR017926 Glutamine amidotransferase ambt_16230 7be9562a2a6b82625cb75016ca7622eb 191 SUPERFAMILY SSF52317 3 191 2.38E-49 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 107 315 9.0E-84 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 Gene3D G3DSA:1.10.287.470 159 188 1.8E-11 T 13-10-2018 ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 213 394 1.4E-36 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 Gene3D G3DSA:2.40.30.170 224 322 4.3E-26 T 13-10-2018 ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 SUPERFAMILY SSF111369 124 320 1.02E-20 T 13-10-2018 ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 Gene3D G3DSA:2.40.30.170 110 123 1.8E-11 T 13-10-2018 ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 Gene3D G3DSA:2.40.50.320 512 583 3.8E-17 T 13-10-2018 ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 Gene3D G3DSA:2.40.50.320 413 482 8.3E-18 T 13-10-2018 ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 Gene3D G3DSA:2.40.420.20 323 412 3.3E-24 T 13-10-2018 ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 Gene3D G3DSA:2.40.50.100 124 158 1.8E-11 T 13-10-2018 ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 Pfam PF11604 Copper binding periplasmic protein CusF 416 481 4.3E-22 T 13-10-2018 IPR021647 Copper binding periplasmic protein CusF ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 Pfam PF11604 Copper binding periplasmic protein CusF 518 583 3.5E-20 T 13-10-2018 IPR021647 Copper binding periplasmic protein CusF ambt_07215 24ce10bb2a9460c15b2c95d8845b750a 610 Gene3D G3DSA:2.40.420.20 98 109 1.8E-11 T 13-10-2018 ambt_15845 a57058fc9b24a6e0e79a0bce5b93c0ef 164 Pfam PF00731 AIR carboxylase 3 151 8.6E-62 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ambt_15845 a57058fc9b24a6e0e79a0bce5b93c0ef 164 PIRSF PIRSF001338 1 164 2.7E-66 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 ambt_15845 a57058fc9b24a6e0e79a0bce5b93c0ef 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 31.014 T 13-10-2018 IPR033747 Class I PurE ambt_15845 a57058fc9b24a6e0e79a0bce5b93c0ef 164 Gene3D G3DSA:3.40.50.7700 1 162 4.7E-69 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 ambt_15845 a57058fc9b24a6e0e79a0bce5b93c0ef 164 SMART SM01001 2 153 1.2E-97 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ambt_15845 a57058fc9b24a6e0e79a0bce5b93c0ef 164 SUPERFAMILY SSF52255 3 160 3.14E-63 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 ambt_15845 a57058fc9b24a6e0e79a0bce5b93c0ef 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 160 9.6E-62 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ambt_09670 57476516c7c45b7ab88e8836fe4490b7 739 SUPERFAMILY SSF53659 3 738 0.0 T 13-10-2018 ambt_09670 57476516c7c45b7ab88e8836fe4490b7 739 Gene3D G3DSA:3.40.718.10 383 649 7.1E-7 T 13-10-2018 ambt_09670 57476516c7c45b7ab88e8836fe4490b7 739 Gene3D G3DSA:3.40.718.10 146 362 2.1E-6 T 13-10-2018 ambt_09670 57476516c7c45b7ab88e8836fe4490b7 739 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 3 739 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ambt_09670 57476516c7c45b7ab88e8836fe4490b7 739 PIRSF PIRSF009407 1 739 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ambt_09670 57476516c7c45b7ab88e8836fe4490b7 739 Pfam PF03971 Monomeric isocitrate dehydrogenase 5 737 0.0 T 13-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ambt_20335 f673b0333ed73bdaaaa96bb0be27bd3c 451 Gene3D G3DSA:3.40.50.200 196 451 6.7E-44 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ambt_20335 f673b0333ed73bdaaaa96bb0be27bd3c 451 SUPERFAMILY SSF52743 207 450 8.77E-46 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ambt_20335 f673b0333ed73bdaaaa96bb0be27bd3c 451 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 400 410 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ambt_20335 f673b0333ed73bdaaaa96bb0be27bd3c 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 249 262 5.1E-6 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related ambt_20335 f673b0333ed73bdaaaa96bb0be27bd3c 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 213 232 5.1E-6 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related ambt_20335 f673b0333ed73bdaaaa96bb0be27bd3c 451 PRINTS PR00723 Subtilisin serine protease family (S8) signature 399 415 5.1E-6 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related ambt_20335 f673b0333ed73bdaaaa96bb0be27bd3c 451 Pfam PF00082 Subtilase family 250 418 4.4E-17 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ambt_22165 d7e15c5936974f07012a338468b40746 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.296 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22165 d7e15c5936974f07012a338468b40746 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 1.8E-57 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22165 d7e15c5936974f07012a338468b40746 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 13-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22165 d7e15c5936974f07012a338468b40746 177 Gene3D G3DSA:1.10.520.20 2 106 8.5E-38 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22165 d7e15c5936974f07012a338468b40746 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.3E-25 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22165 d7e15c5936974f07012a338468b40746 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.3E-25 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22165 d7e15c5936974f07012a338468b40746 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.3E-25 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22165 d7e15c5936974f07012a338468b40746 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.3E-25 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22165 d7e15c5936974f07012a338468b40746 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.3E-25 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22165 d7e15c5936974f07012a338468b40746 177 SUPERFAMILY SSF47928 3 105 1.19E-25 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22165 d7e15c5936974f07012a338468b40746 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 5.4E-53 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_02395 e59ec4bf34dedbcc8d97f50677df1a0b 211 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 17 202 4.0E-36 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ambt_02395 e59ec4bf34dedbcc8d97f50677df1a0b 211 PIRSF PIRSF006806 7 205 3.5E-31 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ambt_02395 e59ec4bf34dedbcc8d97f50677df1a0b 211 Gene3D G3DSA:3.40.50.10420 14 211 2.9E-52 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ambt_02395 e59ec4bf34dedbcc8d97f50677df1a0b 211 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 17 202 3.2E-47 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ambt_02395 e59ec4bf34dedbcc8d97f50677df1a0b 211 SUPERFAMILY SSF100950 14 209 2.23E-52 T 13-10-2018 IPR037171 NagB/RpiA transferase-like ambt_12835 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF13808 DDE_Tnp_1-associated 8 94 4.7E-28 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal ambt_12835 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF01609 Transposase DDE domain 104 336 5.6E-24 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_21285 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF13808 DDE_Tnp_1-associated 8 94 4.7E-28 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal ambt_21285 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF01609 Transposase DDE domain 104 336 5.6E-24 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_11265 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF13808 DDE_Tnp_1-associated 8 94 4.7E-28 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal ambt_11265 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF01609 Transposase DDE domain 104 336 5.6E-24 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_02515 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF13808 DDE_Tnp_1-associated 8 94 4.7E-28 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal ambt_02515 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF01609 Transposase DDE domain 104 336 5.6E-24 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_14205 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF13808 DDE_Tnp_1-associated 8 94 4.7E-28 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal ambt_14205 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF01609 Transposase DDE domain 104 336 5.6E-24 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_21265 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF13808 DDE_Tnp_1-associated 8 94 4.7E-28 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal ambt_21265 cc8939228895cd3d09d2a4e4314826d1 373 Pfam PF01609 Transposase DDE domain 104 336 5.6E-24 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_10195 68b6930caac4d754e689536aff20fb31 1342 SMART SM00487 102 287 7.5E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_10195 68b6930caac4d754e689536aff20fb31 1342 Gene3D G3DSA:3.40.50.300 47 280 2.7E-75 T 13-10-2018 ambt_10195 68b6930caac4d754e689536aff20fb31 1342 SMART SM00847 490 583 7.1E-29 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 ambt_10195 68b6930caac4d754e689536aff20fb31 1342 Gene3D G3DSA:3.40.50.300 281 446 7.1E-56 T 13-10-2018 ambt_10195 68b6930caac4d754e689536aff20fb31 1342 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 646 722 1.6E-18 T 13-10-2018 IPR011709 Domain of unknown function DUF1605 ambt_10195 68b6930caac4d754e689536aff20fb31 1342 Pfam PF04408 Helicase associated domain (HA2) 493 582 3.8E-14 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 ambt_10195 68b6930caac4d754e689536aff20fb31 1342 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 66 1336 0.0 T 13-10-2018 IPR010222 RNA helicase HrpA GO:0004004 ambt_10195 68b6930caac4d754e689536aff20fb31 1342 Gene3D G3DSA:1.20.120.1080 475 574 2.0E-15 T 13-10-2018 ambt_10195 68b6930caac4d754e689536aff20fb31 1342 SMART SM00382 120 412 1.0E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_10195 68b6930caac4d754e689536aff20fb31 1342 SMART SM00490 331 430 4.5E-13 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_10195 68b6930caac4d754e689536aff20fb31 1342 Pfam PF11898 Domain of unknown function (DUF3418) 735 1336 1.0E-192 T 13-10-2018 IPR024590 RNA helicase HrpA, C-terminal ambt_10195 68b6930caac4d754e689536aff20fb31 1342 Pfam PF00271 Helicase conserved C-terminal domain 309 429 1.3E-11 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_10195 68b6930caac4d754e689536aff20fb31 1342 Pfam PF00270 DEAD/DEAH box helicase 117 261 2.1E-6 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_10195 68b6930caac4d754e689536aff20fb31 1342 SUPERFAMILY SSF52540 105 613 5.48E-107 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_09950 a39a89733f9e1f3bc089f9612f9a15ad 259 PIRSF PIRSF005902 1 256 9.7E-83 T 13-10-2018 IPR001130 TatD family GO:0016788 ambt_09950 a39a89733f9e1f3bc089f9612f9a15ad 259 Pfam PF01026 TatD related DNase 3 252 7.0E-77 T 13-10-2018 IPR001130 TatD family GO:0016788 ambt_09950 a39a89733f9e1f3bc089f9612f9a15ad 259 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ambt_09950 a39a89733f9e1f3bc089f9612f9a15ad 259 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 252 3.2E-89 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 ambt_09950 a39a89733f9e1f3bc089f9612f9a15ad 259 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ambt_09950 a39a89733f9e1f3bc089f9612f9a15ad 259 Gene3D G3DSA:3.20.20.140 1 258 6.2E-94 T 13-10-2018 ambt_09950 a39a89733f9e1f3bc089f9612f9a15ad 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ambt_09950 a39a89733f9e1f3bc089f9612f9a15ad 259 SUPERFAMILY SSF51556 2 253 1.9E-85 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_08055 e8ac7aa3f75c0db2b7413543d85e5738 455 Pfam PF07044 Protein of unknown function (DUF1329) 85 450 3.0E-157 T 13-10-2018 IPR010752 Protein of unknown function DUF1329 ambt_06810 d6c505185b6ed64a3567ee3b7f6bf42b 138 Pfam PF07681 DoxX 17 82 9.5E-5 T 13-10-2018 IPR032808 DoxX family ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 SUPERFAMILY SSF82866 293 490 6.8E-45 T 13-10-2018 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 3.9E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 3.9E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 3.9E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 3.9E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 3.9E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 3.9E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 PRINTS PR00702 Acriflavin resistance protein family signature 609 623 3.9E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 3.9E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 PRINTS PR00702 Acriflavin resistance protein family signature 17 41 3.9E-67 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 Gene3D G3DSA:3.30.70.1430 47 800 9.9E-279 T 13-10-2018 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 Gene3D G3DSA:1.20.1640.10 17 503 9.9E-279 T 13-10-2018 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 SUPERFAMILY SSF82866 797 1013 6.8E-44 T 13-10-2018 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 Gene3D G3DSA:3.30.70.1320 141 327 9.9E-279 T 13-10-2018 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 Gene3D G3DSA:3.30.70.1440 654 849 9.9E-279 T 13-10-2018 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 Pfam PF00873 AcrB/AcrD/AcrF family 12 1009 1.0E-255 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 Gene3D G3DSA:1.20.1640.10 504 1006 9.9E-279 T 13-10-2018 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 Gene3D G3DSA:3.30.2090.10 185 271 9.9E-279 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 SUPERFAMILY SSF82693 143 323 1.31E-14 T 13-10-2018 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 Gene3D G3DSA:3.30.2090.10 704 792 9.9E-279 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 SUPERFAMILY SSF82693 556 647 1.49E-15 T 13-10-2018 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 Gene3D G3DSA:3.30.70.1430 558 653 9.9E-279 T 13-10-2018 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 SUPERFAMILY SSF82693 47 140 9.16E-22 T 13-10-2018 ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 SUPERFAMILY SSF82714 190 267 1.57E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_12275 17720f74ec0d7e8d8e380d91f3954526 1039 SUPERFAMILY SSF82714 705 788 3.79E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_06150 f3be86278405a02b23bfdb848e2757ea 143 Pfam PF13808 DDE_Tnp_1-associated 8 94 5.5E-29 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal ambt_13760 b5da867f7c311e4a37f7d56392aaa00f 137 Pfam PF00717 Peptidase S24-like 47 98 2.3E-8 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ambt_13760 b5da867f7c311e4a37f7d56392aaa00f 137 SUPERFAMILY SSF51306 4 125 5.76E-22 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ambt_13760 b5da867f7c311e4a37f7d56392aaa00f 137 Gene3D G3DSA:2.10.109.10 15 128 9.5E-32 T 13-10-2018 ambt_19780 df2d2d60f85eb7ac2e3b9b06e81c6817 407 Gene3D G3DSA:1.10.10.10 29 96 1.2E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_19780 df2d2d60f85eb7ac2e3b9b06e81c6817 407 Gene3D G3DSA:3.30.420.40 97 211 1.1E-6 T 13-10-2018 ambt_19780 df2d2d60f85eb7ac2e3b9b06e81c6817 407 Pfam PF00480 ROK family 103 266 1.3E-18 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ambt_19780 df2d2d60f85eb7ac2e3b9b06e81c6817 407 Gene3D G3DSA:3.30.420.40 212 404 6.8E-23 T 13-10-2018 ambt_19780 df2d2d60f85eb7ac2e3b9b06e81c6817 407 Pfam PF13412 Winged helix-turn-helix DNA-binding 31 73 4.2E-8 T 13-10-2018 ambt_19780 df2d2d60f85eb7ac2e3b9b06e81c6817 407 SUPERFAMILY SSF46785 30 96 3.24E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_19780 df2d2d60f85eb7ac2e3b9b06e81c6817 407 SUPERFAMILY SSF53067 103 402 1.71E-31 T 13-10-2018 ambt_21090 110d86212882ce4b3a1102bf77a57ea8 430 Pfam PF00589 Phage integrase family 195 391 7.7E-11 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_21090 110d86212882ce4b3a1102bf77a57ea8 430 SUPERFAMILY SSF56349 100 400 1.85E-18 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_21090 110d86212882ce4b3a1102bf77a57ea8 430 Gene3D G3DSA:1.10.443.10 195 403 1.1E-19 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_21090 110d86212882ce4b3a1102bf77a57ea8 430 Gene3D G3DSA:1.10.150.130 54 150 2.9E-5 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_03290 8661f72d2c826f47176fd33c7979db79 135 SUPERFAMILY SSF54593 4 133 2.89E-14 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_03290 8661f72d2c826f47176fd33c7979db79 135 Gene3D G3DSA:3.10.180.10 5 134 3.1E-7 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_04735 525064d6a39b7c0cd2a50caf63aa523d 639 SUPERFAMILY SSF52540 16 602 9.49E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04735 525064d6a39b7c0cd2a50caf63aa523d 639 SMART SM00488 21 279 0.0063 T 13-10-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 ambt_04735 525064d6a39b7c0cd2a50caf63aa523d 639 SMART SM00487 19 295 0.0023 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_04735 525064d6a39b7c0cd2a50caf63aa523d 639 SUPERFAMILY SSF52540 190 591 1.9E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04735 525064d6a39b7c0cd2a50caf63aa523d 639 Pfam PF13307 Helicase C-terminal domain 461 619 8.5E-34 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ambt_04735 525064d6a39b7c0cd2a50caf63aa523d 639 Pfam PF00270 DEAD/DEAH box helicase 32 109 1.8E-5 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_04735 525064d6a39b7c0cd2a50caf63aa523d 639 Gene3D G3DSA:3.40.50.300 22 283 2.7E-48 T 13-10-2018 ambt_04735 525064d6a39b7c0cd2a50caf63aa523d 639 SMART SM00491 477 606 1.9E-40 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ambt_04735 525064d6a39b7c0cd2a50caf63aa523d 639 Gene3D G3DSA:3.40.50.300 444 637 1.9E-37 T 13-10-2018 ambt_06100 682008bd6374279aa7b033bad3ebb860 391 SUPERFAMILY SSF51735 9 162 5.33E-13 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_06100 682008bd6374279aa7b033bad3ebb860 391 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 9 137 1.6E-15 T 13-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 ambt_06100 682008bd6374279aa7b033bad3ebb860 391 Gene3D G3DSA:3.40.50.720 8 175 2.1E-36 T 13-10-2018 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.2E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 227 240 1.2E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 273 289 1.2E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 1.2E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 PRINTS PR00980 Alanyl-tRNA synthetase signature 297 310 1.2E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 SUPERFAMILY SSF101353 247 453 5.23E-61 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 844 0.0 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 SMART SM00863 643 686 6.2E-24 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 Pfam PF01411 tRNA synthetases class II (A) 8 544 3.1E-230 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 SUPERFAMILY SSF55186 542 700 7.19E-52 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 Gene3D G3DSA:3.10.310.40 754 862 1.5E-31 T 13-10-2018 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 SUPERFAMILY SSF50447 446 541 1.48E-17 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 643 686 8.0E-20 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 Gene3D G3DSA:3.30.54.20 614 667 1.1E-51 T 13-10-2018 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 865 198.905 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 Gene3D G3DSA:3.30.930.10 2 243 2.9E-117 T 13-10-2018 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 Gene3D G3DSA:2.40.30.130 452 542 8.1E-14 T 13-10-2018 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 Gene3D G3DSA:3.30.980.10 552 687 1.1E-51 T 13-10-2018 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 Pfam PF02272 DHHA1 domain 724 861 4.3E-27 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ambt_13085 18c1cb3831f016fa78bd05625effcc36 865 SUPERFAMILY SSF55681 4 246 1.22E-110 T 13-10-2018 ambt_05025 08b40a8588890de9882f0dbb0c0cd0ec 339 SUPERFAMILY SSF55073 184 337 1.18E-44 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_05025 08b40a8588890de9882f0dbb0c0cd0ec 339 SMART SM00267 168 339 1.1E-54 T 13-10-2018 IPR000160 GGDEF domain ambt_05025 08b40a8588890de9882f0dbb0c0cd0ec 339 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 337 8.2E-49 T 13-10-2018 IPR000160 GGDEF domain ambt_05025 08b40a8588890de9882f0dbb0c0cd0ec 339 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 335 2.8E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_05025 08b40a8588890de9882f0dbb0c0cd0ec 339 Gene3D G3DSA:3.30.70.270 172 339 2.7E-52 T 13-10-2018 ambt_00875 203715ec25ef5505569f665b1eee5c23 242 Gene3D G3DSA:3.60.10.10 2 237 8.6E-42 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_00875 203715ec25ef5505569f665b1eee5c23 242 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 223 7.3E-16 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ambt_00875 203715ec25ef5505569f665b1eee5c23 242 SUPERFAMILY SSF56219 3 232 1.28E-36 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_19980 f24f4bab6d78a831075ec0c0a84de3d8 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 72 2.0E-21 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19980 f24f4bab6d78a831075ec0c0a84de3d8 75 Gene3D G3DSA:4.10.640.10 20 75 6.2E-29 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19980 f24f4bab6d78a831075ec0c0a84de3d8 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 7.9E-37 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19980 f24f4bab6d78a831075ec0c0a84de3d8 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.1E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19980 f24f4bab6d78a831075ec0c0a84de3d8 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.1E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19980 f24f4bab6d78a831075ec0c0a84de3d8 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.1E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19980 f24f4bab6d78a831075ec0c0a84de3d8 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.1E-18 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19980 f24f4bab6d78a831075ec0c0a84de3d8 75 Pfam PF01084 Ribosomal protein S18 19 68 1.0E-25 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19980 f24f4bab6d78a831075ec0c0a84de3d8 75 SUPERFAMILY SSF46911 3 74 3.14E-29 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19980 f24f4bab6d78a831075ec0c0a84de3d8 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 13-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19980 f24f4bab6d78a831075ec0c0a84de3d8 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.516 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 SMART SM00382 159 302 2.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 Gene3D G3DSA:3.40.50.300 130 309 3.4E-64 T 13-10-2018 ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 SMART SM00448 9 120 3.9E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 SUPERFAMILY SSF52540 139 383 2.1E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 Gene3D G3DSA:1.10.10.60 389 442 1.5E-12 T 13-10-2018 ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 Pfam PF00158 Sigma-54 interaction domain 139 305 3.3E-71 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 Gene3D G3DSA:3.40.50.2300 3 129 3.6E-35 T 13-10-2018 ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 SUPERFAMILY SSF52172 7 183 1.57E-44 T 13-10-2018 IPR011006 CheY-like superfamily ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 Pfam PF00072 Response regulator receiver domain 12 120 1.4E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 Gene3D G3DSA:1.10.8.60 310 388 2.0E-20 T 13-10-2018 ambt_12150 9721b6131577fab7dbe2212e14b44b70 446 SUPERFAMILY SSF46689 390 440 2.21E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_16435 d8f43a08a7fe658cfd91aef979006a15 894 SMART SM00487 5 193 1.3E-16 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_16435 d8f43a08a7fe658cfd91aef979006a15 894 Pfam PF08482 ATP-dependent helicase C-terminal 738 858 2.6E-37 T 13-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal ambt_16435 d8f43a08a7fe658cfd91aef979006a15 894 Pfam PF00270 DEAD/DEAH box helicase 18 164 6.2E-7 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_16435 d8f43a08a7fe658cfd91aef979006a15 894 Pfam PF00271 Helicase conserved C-terminal domain 215 335 2.4E-12 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_16435 d8f43a08a7fe658cfd91aef979006a15 894 Gene3D G3DSA:3.40.50.300 1 184 1.5E-46 T 13-10-2018 ambt_16435 d8f43a08a7fe658cfd91aef979006a15 894 SUPERFAMILY SSF52540 20 347 8.57E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_16435 d8f43a08a7fe658cfd91aef979006a15 894 Pfam PF04408 Helicase associated domain (HA2) 398 438 5.0E-5 T 13-10-2018 IPR007502 Helicase-associated domain GO:0004386 ambt_16435 d8f43a08a7fe658cfd91aef979006a15 894 SMART SM00490 236 336 2.5E-10 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_16435 d8f43a08a7fe658cfd91aef979006a15 894 Gene3D G3DSA:3.40.50.300 187 356 1.1E-51 T 13-10-2018 ambt_16435 d8f43a08a7fe658cfd91aef979006a15 894 PIRSF PIRSF005496 3 561 1.7E-160 T 13-10-2018 ambt_16435 d8f43a08a7fe658cfd91aef979006a15 894 PIRSF PIRSF005496 554 861 1.4E-53 T 13-10-2018 ambt_10845 7c8f7c4823504e339e2b3c55cde4ef04 284 Pfam PF02625 XdhC and CoxI family 14 72 1.2E-17 T 13-10-2018 IPR003777 XdhC- CoxI ambt_10845 7c8f7c4823504e339e2b3c55cde4ef04 284 Gene3D G3DSA:3.40.50.720 112 259 5.3E-37 T 13-10-2018 ambt_10845 7c8f7c4823504e339e2b3c55cde4ef04 284 Pfam PF13478 XdhC Rossmann domain 114 255 5.6E-35 T 13-10-2018 IPR027051 XdhC Rossmann domain ambt_10845 7c8f7c4823504e339e2b3c55cde4ef04 284 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 21 256 3.5E-81 T 13-10-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 SUPERFAMILY SSF82693 40 128 3.56E-18 T 13-10-2018 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 Gene3D G3DSA:1.20.1640.10 18 502 7.2E-234 T 13-10-2018 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 Gene3D G3DSA:3.30.70.1320 133 329 7.2E-234 T 13-10-2018 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 Gene3D G3DSA:3.30.2090.10 702 788 7.2E-234 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-40 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 1.6E-40 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 1.6E-40 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 1.6E-40 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-40 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 1.6E-40 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 1.6E-40 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 SUPERFAMILY SSF82714 701 784 7.32E-7 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 Gene3D G3DSA:3.30.70.1430 557 650 7.2E-234 T 13-10-2018 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 Gene3D G3DSA:1.20.1640.10 503 1007 7.2E-234 T 13-10-2018 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 SUPERFAMILY SSF82866 294 494 2.88E-35 T 13-10-2018 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 Gene3D G3DSA:3.30.70.1440 651 850 7.2E-234 T 13-10-2018 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 Gene3D G3DSA:3.30.70.1430 40 796 7.2E-234 T 13-10-2018 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 SUPERFAMILY SSF82714 189 267 1.96E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 Pfam PF00873 AcrB/AcrD/AcrF family 15 1009 2.7E-176 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 SUPERFAMILY SSF82693 141 314 2.62E-10 T 13-10-2018 ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 Gene3D G3DSA:3.30.2090.10 186 274 7.2E-234 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_19970 fe7a399cb91342deaa005646b31aeef2 1046 SUPERFAMILY SSF82866 783 1010 6.28E-41 T 13-10-2018 ambt_13630 d62359cc27e03c555e5dd577b3d2d58d 318 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 318 9.6E-160 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_13630 d62359cc27e03c555e5dd577b3d2d58d 318 SUPERFAMILY SSF52096 6 317 1.37E-102 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_13630 d62359cc27e03c555e5dd577b3d2d58d 318 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 318 50.294 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_13630 d62359cc27e03c555e5dd577b3d2d58d 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 199 208 3.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_13630 d62359cc27e03c555e5dd577b3d2d58d 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 90 101 3.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_13630 d62359cc27e03c555e5dd577b3d2d58d 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 155 168 3.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_13630 d62359cc27e03c555e5dd577b3d2d58d 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 136 152 3.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_13630 d62359cc27e03c555e5dd577b3d2d58d 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 171 184 3.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_13630 d62359cc27e03c555e5dd577b3d2d58d 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 115 133 3.7E-49 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_13630 d62359cc27e03c555e5dd577b3d2d58d 318 Gene3D G3DSA:3.90.226.10 2 317 5.4E-117 T 13-10-2018 ambt_13630 d62359cc27e03c555e5dd577b3d2d58d 318 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 150 1.2E-62 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_12110 189f3f9d701d609a870834643e50fde5 132 SUPERFAMILY SSF54637 2 125 2.19E-39 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_12110 189f3f9d701d609a870834643e50fde5 132 Gene3D G3DSA:3.10.129.10 1 131 1.2E-41 T 13-10-2018 ambt_12110 189f3f9d701d609a870834643e50fde5 132 PIRSF PIRSF003230 1 132 2.5E-47 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ambt_12110 189f3f9d701d609a870834643e50fde5 132 Pfam PF03061 Thioesterase superfamily 16 99 1.9E-15 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ambt_12110 189f3f9d701d609a870834643e50fde5 132 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 2 125 2.0E-51 T 13-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 ambt_12110 189f3f9d701d609a870834643e50fde5 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 6 121 1.6E-38 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ambt_06745 97ed0d954ff072aa58bec87ff1ecf964 562 SUPERFAMILY SSF52172 13 154 1.22E-18 T 13-10-2018 IPR011006 CheY-like superfamily ambt_06745 97ed0d954ff072aa58bec87ff1ecf964 562 SMART SM00448 14 130 9.7E-10 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_06745 97ed0d954ff072aa58bec87ff1ecf964 562 SMART SM00028 240 273 83.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_06745 97ed0d954ff072aa58bec87ff1ecf964 562 SMART SM00028 173 206 27.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_06745 97ed0d954ff072aa58bec87ff1ecf964 562 SMART SM00028 453 486 0.07 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_06745 97ed0d954ff072aa58bec87ff1ecf964 562 Gene3D G3DSA:3.40.50.2300 7 142 8.5E-17 T 13-10-2018 ambt_06745 97ed0d954ff072aa58bec87ff1ecf964 562 Pfam PF00072 Response regulator receiver domain 16 130 2.7E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_06745 97ed0d954ff072aa58bec87ff1ecf964 562 Gene3D G3DSA:1.25.40.10 143 306 2.4E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_06745 97ed0d954ff072aa58bec87ff1ecf964 562 SUPERFAMILY SSF48452 147 487 4.09E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_09065 3db74b49bddfe488c9178055c736f583 201 SMART SM00563 48 160 6.0E-17 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_09065 3db74b49bddfe488c9178055c736f583 201 Pfam PF01553 Acyltransferase 36 153 1.0E-14 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_09065 3db74b49bddfe488c9178055c736f583 201 SUPERFAMILY SSF69593 19 159 4.97E-18 T 13-10-2018 ambt_08430 eee742f3d3b5b099382fb22b687c76ea 120 Gene3D G3DSA:3.40.1260.10 1 120 3.2E-34 T 13-10-2018 IPR027396 DsrEFH-like ambt_08430 eee742f3d3b5b099382fb22b687c76ea 120 Pfam PF02635 DsrE/DsrF-like family 4 120 1.5E-13 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein ambt_08430 eee742f3d3b5b099382fb22b687c76ea 120 SUPERFAMILY SSF75169 1 120 1.46E-23 T 13-10-2018 IPR027396 DsrEFH-like ambt_07025 c5344666f452e7b2679cfb47d56e8b3d 159 Pfam PF01668 SmpB protein 14 157 5.8E-57 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 ambt_07025 c5344666f452e7b2679cfb47d56e8b3d 159 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.5E-52 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 ambt_07025 c5344666f452e7b2679cfb47d56e8b3d 159 Hamap MF_00023 SsrA-binding protein [smpB]. 1 159 68.247 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 ambt_07025 c5344666f452e7b2679cfb47d56e8b3d 159 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 6.0E-41 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 ambt_07025 c5344666f452e7b2679cfb47d56e8b3d 159 Gene3D G3DSA:2.40.280.10 6 134 1.8E-45 T 13-10-2018 IPR023620 Small protein B ambt_07025 c5344666f452e7b2679cfb47d56e8b3d 159 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 13-10-2018 IPR020081 SsrA-binding protein, conserved site ambt_07025 c5344666f452e7b2679cfb47d56e8b3d 159 SUPERFAMILY SSF74982 8 138 3.66E-48 T 13-10-2018 IPR023620 Small protein B ambt_04955 34fea1b0f200375ddd4a7b872c85f5b8 221 Pfam PF00072 Response regulator receiver domain 3 112 8.7E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_04955 34fea1b0f200375ddd4a7b872c85f5b8 221 SMART SM00862 145 216 4.8E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_04955 34fea1b0f200375ddd4a7b872c85f5b8 221 SUPERFAMILY SSF46894 121 216 7.02E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_04955 34fea1b0f200375ddd4a7b872c85f5b8 221 Gene3D G3DSA:3.40.50.2300 1 121 1.4E-36 T 13-10-2018 ambt_04955 34fea1b0f200375ddd4a7b872c85f5b8 221 SUPERFAMILY SSF52172 1 118 2.42E-36 T 13-10-2018 IPR011006 CheY-like superfamily ambt_04955 34fea1b0f200375ddd4a7b872c85f5b8 221 Gene3D G3DSA:1.10.10.10 122 220 2.4E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_04955 34fea1b0f200375ddd4a7b872c85f5b8 221 SMART SM00448 1 112 4.5E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_04955 34fea1b0f200375ddd4a7b872c85f5b8 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 216 3.4E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_20555 590287ad9ff466562ab3bccda702a541 296 SUPERFAMILY SSF103481 185 280 1.77E-15 T 13-10-2018 ambt_20555 590287ad9ff466562ab3bccda702a541 296 SUPERFAMILY SSF103481 39 138 2.22E-16 T 13-10-2018 ambt_20555 590287ad9ff466562ab3bccda702a541 296 Pfam PF00892 EamA-like transporter family 149 280 1.3E-22 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_20555 590287ad9ff466562ab3bccda702a541 296 Pfam PF00892 EamA-like transporter family 8 136 1.1E-19 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 SUPERFAMILY SSF82714 720 795 1.16E-7 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 SUPERFAMILY SSF82693 44 132 1.36E-17 T 13-10-2018 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 Gene3D G3DSA:3.30.2090.10 175 265 1.2E-226 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 Gene3D G3DSA:3.30.70.1440 666 859 1.2E-226 T 13-10-2018 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 SUPERFAMILY SSF82866 794 1021 4.84E-41 T 13-10-2018 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 SUPERFAMILY SSF82866 288 485 2.22E-33 T 13-10-2018 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 SUPERFAMILY SSF82714 182 259 1.96E-8 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 Gene3D G3DSA:3.30.70.1430 41 806 1.2E-226 T 13-10-2018 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 Gene3D G3DSA:3.30.70.1430 563 665 1.2E-226 T 13-10-2018 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 Gene3D G3DSA:3.30.70.1320 134 322 1.2E-226 T 13-10-2018 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 SUPERFAMILY SSF82693 139 318 2.51E-9 T 13-10-2018 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 Gene3D G3DSA:1.20.1640.10 506 1015 1.2E-226 T 13-10-2018 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 Gene3D G3DSA:3.30.2090.10 711 798 1.2E-226 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 Pfam PF00873 AcrB/AcrD/AcrF family 6 1015 2.8E-145 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 7.4E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 7.4E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 PRINTS PR00702 Acriflavin resistance protein family signature 326 349 7.4E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 7.4E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 7.4E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_21225 4e6624dad9478f8d0210ee759b930d60 1038 Gene3D G3DSA:1.20.1640.10 11 501 1.2E-226 T 13-10-2018 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 Gene3D G3DSA:3.50.40.10 197 394 2.6E-75 T 13-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 SUPERFAMILY SSF46955 405 475 9.16E-20 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 SUPERFAMILY SSF56037 195 394 1.15E-72 T 13-10-2018 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 SMART SM00896 701 794 1.5E-36 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 Gene3D G3DSA:3.30.70.380 702 795 1.0E-27 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 SUPERFAMILY SSF50249 35 197 8.57E-53 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 Pfam PF01588 Putative tRNA binding domain 46 145 7.7E-28 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 Gene3D G3DSA:3.30.930.10 489 691 5.0E-59 T 13-10-2018 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 SMART SM00873 212 385 3.1E-91 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.3E-24 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 Gene3D G3DSA:2.40.50.140 39 154 9.4E-75 T 13-10-2018 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 Gene3D G3DSA:3.30.56.10 7 179 9.4E-75 T 13-10-2018 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 Pfam PF03484 tRNA synthetase B5 domain 408 471 2.5E-19 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 SUPERFAMILY SSF54991 697 794 1.22E-27 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 SUPERFAMILY SSF55681 467 689 6.46E-51 T 13-10-2018 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 46.306 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 3.7E-270 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 Pfam PF03483 B3/4 domain 212 385 1.5E-66 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 SMART SM00874 403 471 1.3E-28 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ambt_10460 afb5a4e38c86315cfeeffd97604ed036 795 Gene3D G3DSA:3.30.56.10 401 475 1.6E-25 T 13-10-2018 ambt_00850 9c8ffeb404fa144485608fcbe04843dd 122 Pfam PF00072 Response regulator receiver domain 5 113 4.8E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_00850 9c8ffeb404fa144485608fcbe04843dd 122 SUPERFAMILY SSF52172 3 117 2.7E-29 T 13-10-2018 IPR011006 CheY-like superfamily ambt_00850 9c8ffeb404fa144485608fcbe04843dd 122 Gene3D G3DSA:3.40.50.2300 1 119 6.3E-29 T 13-10-2018 ambt_00850 9c8ffeb404fa144485608fcbe04843dd 122 SMART SM00448 3 116 3.1E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 Gene3D G3DSA:3.30.70.1440 669 865 7.5E-272 T 13-10-2018 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 SUPERFAMILY SSF82693 47 139 1.26E-17 T 13-10-2018 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 SUPERFAMILY SSF82866 294 493 7.32E-36 T 13-10-2018 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 Gene3D G3DSA:3.30.70.1430 47 812 7.5E-272 T 13-10-2018 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 Gene3D G3DSA:3.30.2090.10 181 272 7.5E-272 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 Pfam PF00873 AcrB/AcrD/AcrF family 12 1025 6.5E-167 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 SUPERFAMILY SSF82693 143 327 6.02E-15 T 13-10-2018 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 Gene3D G3DSA:1.20.1640.10 512 1022 7.5E-272 T 13-10-2018 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 Gene3D G3DSA:3.30.2090.10 717 804 7.5E-272 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 SUPERFAMILY SSF82714 727 802 2.62E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 Gene3D G3DSA:3.30.70.1430 569 668 7.5E-272 T 13-10-2018 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 SUPERFAMILY SSF82866 802 1027 2.35E-42 T 13-10-2018 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 SUPERFAMILY SSF82714 185 268 2.22E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 Gene3D G3DSA:3.30.70.1320 140 329 7.5E-272 T 13-10-2018 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 Gene3D G3DSA:1.20.1640.10 17 511 7.5E-272 T 13-10-2018 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 1.7E-20 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.7E-20 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 1.7E-20 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 1.7E-20 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09115 01912d0cd44555f694df2059eaf0c7c4 1049 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 1.7E-20 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_21465 c4528068d2f026582c90ef360782ad26 194 SUPERFAMILY SSF101874 24 193 4.45E-25 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ambt_21465 c4528068d2f026582c90ef360782ad26 194 PIRSF PIRSF029811 3 194 4.6E-57 T 13-10-2018 IPR027016 Uncharacterised protein with YceI domain ambt_21465 c4528068d2f026582c90ef360782ad26 194 SMART SM00867 25 193 1.2E-19 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ambt_21465 c4528068d2f026582c90ef360782ad26 194 Pfam PF04264 YceI-like domain 26 192 2.9E-15 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ambt_21465 c4528068d2f026582c90ef360782ad26 194 Gene3D G3DSA:2.40.128.110 22 194 6.4E-51 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 736 795 8.6E-30 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 806 106.279 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 SMART SM00433 37 799 1.8E-267 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 Pfam PF00204 DNA gyrase B 222 392 2.6E-60 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 Gene3D G3DSA:3.40.50.670 694 805 6.2E-25 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 SMART SM00387 33 177 5.8E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR01159 DNA gyrase subunit B signature 197 210 1.7E-83 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR01159 DNA gyrase subunit B signature 182 197 1.7E-83 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR01159 DNA gyrase subunit B signature 362 376 1.7E-83 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR01159 DNA gyrase subunit B signature 221 243 1.7E-83 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR01159 DNA gyrase subunit B signature 314 330 1.7E-83 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR01159 DNA gyrase subunit B signature 376 396 1.7E-83 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR01159 DNA gyrase subunit B signature 244 262 1.7E-83 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR01159 DNA gyrase subunit B signature 759 771 1.7E-83 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR01159 DNA gyrase subunit B signature 7 17 1.7E-83 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR01159 DNA gyrase subunit B signature 472 481 1.7E-83 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR01159 DNA gyrase subunit B signature 775 791 1.7E-83 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 Gene3D G3DSA:3.30.230.10 222 394 3.7E-73 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 Gene3D G3DSA:3.30.565.10 3 221 2.9E-95 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 SUPERFAMILY SSF54211 222 394 5.88E-60 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 174 1.5E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 SUPERFAMILY SSF55874 6 219 4.32E-74 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR00418 DNA topoisomerase II family signature 489 505 1.2E-70 T 13-10-2018 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR00418 DNA topoisomerase II family signature 527 539 1.2E-70 T 13-10-2018 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR00418 DNA topoisomerase II family signature 115 129 1.2E-70 T 13-10-2018 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR00418 DNA topoisomerase II family signature 270 283 1.2E-70 T 13-10-2018 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR00418 DNA topoisomerase II family signature 72 85 1.2E-70 T 13-10-2018 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR00418 DNA topoisomerase II family signature 422 436 1.2E-70 T 13-10-2018 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR00418 DNA topoisomerase II family signature 37 52 1.2E-70 T 13-10-2018 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR00418 DNA topoisomerase II family signature 507 524 1.2E-70 T 13-10-2018 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 PRINTS PR00418 DNA topoisomerase II family signature 738 754 1.2E-70 T 13-10-2018 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 806 0.0 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 Pfam PF01751 Toprim domain 421 533 1.3E-18 T 13-10-2018 IPR006171 TOPRIM domain ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 Gene3D G3DSA:3.40.50.670 400 598 2.5E-74 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 Gene3D G3DSA:3.10.20.690 599 685 3.2E-19 T 13-10-2018 ambt_00020 3ba6e3f76caab00e7a7da0d5caf9d9af 806 SUPERFAMILY SSF56719 396 796 4.18E-86 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 Gene3D G3DSA:1.10.580.10 56 410 2.4E-144 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 PRINTS PR00143 Citrate synthase signature 378 392 1.4E-53 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 PRINTS PR00143 Citrate synthase signature 295 315 1.4E-53 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 PRINTS PR00143 Citrate synthase signature 358 374 1.4E-53 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 PRINTS PR00143 Citrate synthase signature 240 268 1.4E-53 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 PRINTS PR00143 Citrate synthase signature 164 177 1.4E-53 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 PRINTS PR00143 Citrate synthase signature 218 233 1.4E-53 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 SUPERFAMILY SSF48256 5 424 2.36E-161 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 Gene3D G3DSA:1.10.230.10 267 375 2.4E-144 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 PIRSF PIRSF001369 37 425 1.6E-165 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 421 1.2E-225 T 13-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 Pfam PF00285 Citrate synthase, C-terminal domain 45 410 6.4E-129 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_07550 3ecc278ebb82d6ba800a0922cbf8b94d 425 Gene3D G3DSA:2.20.28.60 1 49 3.8E-23 T 13-10-2018 ambt_21405 2e8f18ebc007547e734c7fbc39afa705 134 SUPERFAMILY SSF54523 46 127 4.32E-24 T 13-10-2018 ambt_21405 2e8f18ebc007547e734c7fbc39afa705 134 Gene3D G3DSA:3.30.1300.30 41 127 1.8E-25 T 13-10-2018 ambt_21405 2e8f18ebc007547e734c7fbc39afa705 134 Pfam PF02501 Type II secretion system (T2SS), protein I 49 126 2.2E-25 T 13-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 ambt_21405 2e8f18ebc007547e734c7fbc39afa705 134 TIGRFAM TIGR01707 gspI: type II secretion system protein I 14 112 1.3E-25 T 13-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 ambt_21405 2e8f18ebc007547e734c7fbc39afa705 134 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_21405 2e8f18ebc007547e734c7fbc39afa705 134 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 34 4.8E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_21405 2e8f18ebc007547e734c7fbc39afa705 134 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 5.3E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_14520 30adf2a256d0ff3e424e48a2bac26b38 365 SUPERFAMILY SSF52540 60 226 1.3E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14520 30adf2a256d0ff3e424e48a2bac26b38 365 Pfam PF03969 AFG1-like ATPase 1 361 1.2E-145 T 13-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 ambt_14520 30adf2a256d0ff3e424e48a2bac26b38 365 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 365 54.274 T 13-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 ambt_14520 30adf2a256d0ff3e424e48a2bac26b38 365 Gene3D G3DSA:3.40.50.300 4 192 1.1E-19 T 13-10-2018 ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 Gene3D G3DSA:2.60.40.1130 261 375 1.1E-24 T 13-10-2018 ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 SUPERFAMILY SSF81296 251 375 1.82E-25 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 Gene3D G3DSA:3.20.20.80 487 1048 4.2E-183 T 13-10-2018 ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 Gene3D G3DSA:2.60.40.10 380 486 4.5E-27 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 Pfam PF11852 Domain of unknown function (DUF3372) 954 1130 6.4E-57 T 13-10-2018 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 SUPERFAMILY SSF51011 1016 1141 1.94E-31 T 13-10-2018 ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 Gene3D G3DSA:2.60.40.1110 110 247 2.4E-28 T 13-10-2018 ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 Pfam PF03714 Bacterial pullanase-associated domain 130 243 6.2E-11 T 13-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 Gene3D G3DSA:2.60.40.10 1259 1333 2.1E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 SUPERFAMILY SSF49452 109 247 5.89E-31 T 13-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 Gene3D G3DSA:2.60.40.1180 1055 1143 4.3E-20 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 SUPERFAMILY SSF81296 386 491 3.85E-21 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 388 472 4.6E-13 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ambt_07630 6901451b698bf398cb41fd3acb5e5532 1484 SUPERFAMILY SSF51445 485 1013 2.9E-110 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_15855 67a116d34556457e82fb74fceee86ea9 936 SMART SM00448 815 929 3.6E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 SUPERFAMILY SSF103190 245 349 7.46E-5 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ambt_15855 67a116d34556457e82fb74fceee86ea9 936 Pfam PF00072 Response regulator receiver domain 817 929 5.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 SUPERFAMILY SSF52172 813 934 1.15E-32 T 13-10-2018 IPR011006 CheY-like superfamily ambt_15855 67a116d34556457e82fb74fceee86ea9 936 Gene3D G3DSA:3.40.50.2300 798 934 1.5E-35 T 13-10-2018 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 Pfam PF02743 Cache domain 204 385 6.0E-12 T 13-10-2018 IPR033479 Double Cache domain 1 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 Pfam PF00512 His Kinase A (phospho-acceptor) domain 573 638 1.1E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 SUPERFAMILY SSF55874 627 794 1.57E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_15855 67a116d34556457e82fb74fceee86ea9 936 Gene3D G3DSA:3.30.565.10 637 797 1.1E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_15855 67a116d34556457e82fb74fceee86ea9 936 SUPERFAMILY SSF47384 558 640 4.51E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 SMART SM00388 573 638 4.6E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 735 4.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 PRINTS PR00344 Bacterial sensor protein C-terminal signature 739 749 4.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 PRINTS PR00344 Bacterial sensor protein C-terminal signature 780 793 4.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 PRINTS PR00344 Bacterial sensor protein C-terminal signature 756 774 4.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 SMART SM00387 685 796 2.2E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_15855 67a116d34556457e82fb74fceee86ea9 936 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 686 795 1.3E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_15855 67a116d34556457e82fb74fceee86ea9 936 Gene3D G3DSA:1.10.287.130 538 636 4.0E-25 T 13-10-2018 ambt_15855 67a116d34556457e82fb74fceee86ea9 936 Gene3D G3DSA:3.30.450.20 199 352 7.8E-17 T 13-10-2018 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 Gene3D G3DSA:1.10.287.950 209 540 1.6E-69 T 13-10-2018 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 1.7E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 376 403 1.7E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 1.7E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 SMART SM00283 278 539 4.3E-67 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 Gene3D G3DSA:3.30.450.20 34 185 1.5E-51 T 13-10-2018 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 Pfam PF00672 HAMP domain 210 253 5.1E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 361 503 3.0E-39 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 SMART SM00304 209 263 1.1E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 Pfam PF17200 Single Cache domain 2 39 183 1.0E-37 T 13-10-2018 IPR033480 Single Cache domain 2 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 SMART SM01049 35 126 6.6E-29 T 13-10-2018 IPR033480 Single Cache domain 2 ambt_15465 df4dcf9d48c2d937eb15da9a8044ffee 540 SUPERFAMILY SSF58104 231 540 3.66E-71 T 13-10-2018 ambt_04775 abb2054f31dc1b22183448a2198338a3 329 SUPERFAMILY SSF53955 28 328 2.62E-93 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily ambt_04775 abb2054f31dc1b22183448a2198338a3 329 Gene3D G3DSA:1.10.530.10 74 322 3.0E-85 T 13-10-2018 ambt_04775 abb2054f31dc1b22183448a2198338a3 329 Pfam PF13406 Transglycosylase SLT domain 32 323 1.2E-100 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 ambt_04775 abb2054f31dc1b22183448a2198338a3 329 Gene3D G3DSA:1.10.8.350 43 207 3.0E-85 T 13-10-2018 ambt_04775 abb2054f31dc1b22183448a2198338a3 329 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 32 326 4.5E-104 T 13-10-2018 IPR011970 Lytic murein transglycosylase ambt_13725 08679398803226d7f34e5bcd938562bc 149 Gene3D G3DSA:3.40.50.360 1 147 9.0E-39 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_13725 08679398803226d7f34e5bcd938562bc 149 SUPERFAMILY SSF52218 1 147 4.02E-36 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_13725 08679398803226d7f34e5bcd938562bc 149 Pfam PF00258 Flavodoxin 6 133 2.0E-23 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ambt_05375 63438aa307ffa52ef894a3556b5f7d1f 512 Gene3D G3DSA:3.90.220.20 245 468 4.9E-37 T 13-10-2018 ambt_05375 63438aa307ffa52ef894a3556b5f7d1f 512 Gene3D G3DSA:3.90.220.20 1 173 5.9E-35 T 13-10-2018 ambt_05375 63438aa307ffa52ef894a3556b5f7d1f 512 SUPERFAMILY SSF116734 258 476 7.03E-34 T 13-10-2018 ambt_05375 63438aa307ffa52ef894a3556b5f7d1f 512 Pfam PF01420 Type I restriction modification DNA specificity domain 317 450 2.8E-10 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 ambt_05375 63438aa307ffa52ef894a3556b5f7d1f 512 Pfam PF01420 Type I restriction modification DNA specificity domain 6 179 8.9E-25 T 13-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 ambt_05375 63438aa307ffa52ef894a3556b5f7d1f 512 SUPERFAMILY SSF116734 3 202 1.57E-42 T 13-10-2018 ambt_12365 cf2d6f548ac5255c6a11a5aaa90125ff 318 SUPERFAMILY SSF52540 5 290 3.25E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12365 cf2d6f548ac5255c6a11a5aaa90125ff 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 2.9E-62 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 ambt_12365 cf2d6f548ac5255c6a11a5aaa90125ff 318 PIRSF PIRSF002849 1 318 3.9E-126 T 13-10-2018 ambt_12365 cf2d6f548ac5255c6a11a5aaa90125ff 318 Gene3D G3DSA:1.10.8.300 203 315 7.1E-35 T 13-10-2018 ambt_12365 cf2d6f548ac5255c6a11a5aaa90125ff 318 Gene3D G3DSA:3.40.50.300 1 202 5.1E-50 T 13-10-2018 ambt_17850 5b355e7fea368a345f165ef303e33d74 500 Pfam PF03050 Transposase IS66 family 166 447 2.3E-100 T 13-10-2018 IPR004291 Transposase, IS66 ambt_17850 5b355e7fea368a345f165ef303e33d74 500 Pfam PF13817 IS66 C-terminal element 454 492 4.1E-14 T 13-10-2018 IPR039552 Transposase IS66, C-terminal ambt_17850 5b355e7fea368a345f165ef303e33d74 500 Pfam PF13005 zinc-finger binding domain of transposase IS66 104 146 1.5E-12 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 ambt_17860 5b355e7fea368a345f165ef303e33d74 500 Pfam PF03050 Transposase IS66 family 166 447 2.3E-100 T 13-10-2018 IPR004291 Transposase, IS66 ambt_17860 5b355e7fea368a345f165ef303e33d74 500 Pfam PF13817 IS66 C-terminal element 454 492 4.1E-14 T 13-10-2018 IPR039552 Transposase IS66, C-terminal ambt_17860 5b355e7fea368a345f165ef303e33d74 500 Pfam PF13005 zinc-finger binding domain of transposase IS66 104 146 1.5E-12 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.7E-63 T 13-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 Pfam PF00330 Aconitase family (aconitate hydratase) 470 818 1.4E-40 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 Gene3D G3DSA:3.30.499.10 402 529 4.6E-148 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 SUPERFAMILY SSF74778 2 159 1.09E-65 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 Gene3D G3DSA:3.40.1060.10 385 681 4.6E-148 T 13-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 382 2.0E-94 T 13-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 PIRSF PIRSF036687 1 859 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 SUPERFAMILY SSF53732 379 856 1.96E-147 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 13-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 Gene3D G3DSA:1.25.40.310 1 160 4.2E-67 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 Gene3D G3DSA:3.30.499.10 683 864 2.5E-65 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 Gene3D G3DSA:3.20.19.10 162 361 9.7E-73 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ambt_14830 30ca4b328ae36fb1d70298334a5bbe73 870 SUPERFAMILY SSF52016 164 372 1.96E-67 T 13-10-2018 ambt_19440 012128d36a60696b2dc0ac12f40d6c96 229 SMART SM00382 27 213 1.6E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_19440 012128d36a60696b2dc0ac12f40d6c96 229 SUPERFAMILY SSF52540 1 226 2.21E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19440 012128d36a60696b2dc0ac12f40d6c96 229 Gene3D G3DSA:3.40.50.300 1 228 1.5E-62 T 13-10-2018 ambt_19440 012128d36a60696b2dc0ac12f40d6c96 229 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_19440 012128d36a60696b2dc0ac12f40d6c96 229 Pfam PF00005 ABC transporter 18 165 3.7E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_19440 012128d36a60696b2dc0ac12f40d6c96 229 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.9E-87 T 13-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 ambt_07645 8711ad121f9c439999104dbe384500cb 262 SUPERFAMILY SSF55729 11 217 3.71E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_07645 8711ad121f9c439999104dbe384500cb 262 TIGRFAM TIGR03694 exosort_acyl: N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated 8 235 3.1E-57 T 13-10-2018 IPR022484 PEP-CTERM/exosortase system-associated acyltransferase, predicted ambt_07645 8711ad121f9c439999104dbe384500cb 262 Pfam PF13444 Acetyltransferase (GNAT) domain 30 127 1.1E-13 T 13-10-2018 ambt_07645 8711ad121f9c439999104dbe384500cb 262 Gene3D G3DSA:3.40.630.30 15 221 1.1E-42 T 13-10-2018 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 13 509 40.79 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 157 372 9.0E-68 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 SUPERFAMILY SSF52540 104 378 1.57E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 SUPERFAMILY SSF50615 25 102 4.45E-20 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 Gene3D G3DSA:1.20.150.20 381 512 1.1E-27 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 379 502 1.0E-30 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 Gene3D G3DSA:3.40.50.300 102 379 6.8E-115 T 13-10-2018 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 SUPERFAMILY SSF47917 382 505 4.19E-28 T 13-10-2018 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 29 503 1.9E-190 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 TIGRFAM TIGR03324 alt_F1F0_F1_al: alternate F1F0 ATPase, F1 subunit alpha 10 503 2.5E-259 T 13-10-2018 IPR017710 Alternate ATP synthase, F1 complex, subunit alpha GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 34 100 9.4E-7 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_07065 058640f7dcc2c228c6c5af35e41542e3 522 Gene3D G3DSA:2.40.30.20 32 101 8.6E-21 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 Gene3D G3DSA:3.30.230.10 7 173 1.9E-83 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 Pfam PF00288 GHMP kinases N terminal domain 91 156 6.6E-13 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 Pfam PF08544 GHMP kinases C terminal 223 294 1.9E-11 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 PRINTS PR00958 Homoserine kinase signature 181 198 6.2E-27 T 13-10-2018 ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 PRINTS PR00958 Homoserine kinase signature 260 275 6.2E-27 T 13-10-2018 ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 PRINTS PR00958 Homoserine kinase signature 103 118 6.2E-27 T 13-10-2018 ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 PRINTS PR00958 Homoserine kinase signature 143 156 6.2E-27 T 13-10-2018 ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 PRINTS PR00958 Homoserine kinase signature 11 26 6.2E-27 T 13-10-2018 ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 PIRSF PIRSF000676 1 314 7.3E-76 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 Gene3D G3DSA:3.30.70.890 174 283 1.9E-83 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 Hamap MF_00384 Homoserine kinase [thrB]. 6 314 26.934 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 SUPERFAMILY SSF55060 180 295 2.7E-26 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 TIGRFAM TIGR00191 thrB: homoserine kinase 5 313 6.1E-89 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ambt_01955 ee4f2ff91ed1874173a2f6961813ac72 317 SUPERFAMILY SSF54211 5 191 6.07E-28 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_11065 d63eaab4d0b968b770779c70dfe0f80d 825 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 16 818 0.0 T 13-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 ambt_11065 d63eaab4d0b968b770779c70dfe0f80d 825 Pfam PF00343 Carbohydrate phosphorylase 104 818 0.0 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 ambt_11065 d63eaab4d0b968b770779c70dfe0f80d 825 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 662 674 - T 13-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 ambt_11065 d63eaab4d0b968b770779c70dfe0f80d 825 Gene3D G3DSA:3.40.50.2000 484 811 0.0 T 13-10-2018 ambt_11065 d63eaab4d0b968b770779c70dfe0f80d 825 SUPERFAMILY SSF53756 11 823 0.0 T 13-10-2018 ambt_11065 d63eaab4d0b968b770779c70dfe0f80d 825 Gene3D G3DSA:3.40.50.2000 25 818 0.0 T 13-10-2018 ambt_11065 d63eaab4d0b968b770779c70dfe0f80d 825 PIRSF PIRSF000460 2 825 1.0E-229 T 13-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 ambt_16250 3901850f4da64723f42ca1749f026818 489 Gene3D G3DSA:3.40.605.10 9 452 8.4E-140 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_16250 3901850f4da64723f42ca1749f026818 489 Gene3D G3DSA:3.40.309.10 249 440 8.4E-140 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ambt_16250 3901850f4da64723f42ca1749f026818 489 Pfam PF00171 Aldehyde dehydrogenase family 11 462 3.3E-118 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_16250 3901850f4da64723f42ca1749f026818 489 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 5 488 2.6E-249 T 13-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 ambt_16250 3901850f4da64723f42ca1749f026818 489 SUPERFAMILY SSF53720 3 458 1.57E-121 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_16250 3901850f4da64723f42ca1749f026818 489 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 3 489 57.122 T 13-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 ambt_16250 3901850f4da64723f42ca1749f026818 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ambt_16250 3901850f4da64723f42ca1749f026818 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ambt_13295 4a7736842b2d4715f7a4927260c85883 109 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 109 15.587 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ambt_13295 4a7736842b2d4715f7a4927260c85883 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 73 89 1.2E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ambt_13295 4a7736842b2d4715f7a4927260c85883 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 94 107 1.2E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ambt_13295 4a7736842b2d4715f7a4927260c85883 109 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 38 54 1.2E-10 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ambt_13295 4a7736842b2d4715f7a4927260c85883 109 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 7 108 4.2E-18 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ambt_13295 4a7736842b2d4715f7a4927260c85883 109 Pfam PF02049 Flagellar hook-basal body complex protein FliE 27 109 9.0E-28 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 13-10-2018 IPR018215 ClpP, Ser active site ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 SUPERFAMILY SSF52096 19 203 4.81E-75 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 200 2.1E-107 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 3.5E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 3.5E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 3.5E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 3.5E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 3.5E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 13-10-2018 IPR033135 ClpP, histidine active site ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 Gene3D G3DSA:3.90.226.10 6 208 3.9E-84 T 13-10-2018 ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 Pfam PF00574 Clp protease 22 201 1.3E-89 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ambt_04060 110c8056314269b33a9e86ffbf04cc3d 209 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 44.231 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 SUPERFAMILY SSF51445 89 486 1.75E-99 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 Pfam PF00128 Alpha amylase, catalytic domain 135 236 1.0E-14 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 Pfam PF00128 Alpha amylase, catalytic domain 252 445 1.2E-11 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 SMART SM00642 114 479 2.5E-13 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 496 608 8.2E-6 T 13-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 PIRSF PIRSF000463 1 610 5.6E-91 T 13-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 SUPERFAMILY SSF81296 1 91 2.62E-17 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 Gene3D G3DSA:3.20.20.80 103 480 3.6E-111 T 13-10-2018 ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 SUPERFAMILY SSF51011 492 556 2.23E-6 T 13-10-2018 ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 Gene3D G3DSA:2.60.40.1180 490 583 9.7E-6 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 2 76 2.4E-13 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ambt_02685 96393ccd40c9f93a7b0c8f89bece0944 610 Gene3D G3DSA:2.60.40.10 1 101 4.1E-17 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_21665 391f950d39f66964102141fb68d89a2d 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 230 1.0E-70 T 13-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 ambt_21665 391f950d39f66964102141fb68d89a2d 230 Gene3D G3DSA:3.40.50.1860 104 215 5.8E-84 T 13-10-2018 ambt_21665 391f950d39f66964102141fb68d89a2d 230 SUPERFAMILY SSF53681 1 112 1.5E-35 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ambt_21665 391f950d39f66964102141fb68d89a2d 230 SUPERFAMILY SSF53681 118 229 1.57E-33 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ambt_21665 391f950d39f66964102141fb68d89a2d 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 9.3E-60 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ambt_21665 391f950d39f66964102141fb68d89a2d 230 Gene3D G3DSA:3.40.50.1860 4 223 5.8E-84 T 13-10-2018 ambt_09195 6ddf60e330741f1153fff57492af0eb3 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 6.8E-12 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_09195 6ddf60e330741f1153fff57492af0eb3 335 SUPERFAMILY SSF53822 66 334 3.34E-50 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_09195 6ddf60e330741f1153fff57492af0eb3 335 Gene3D G3DSA:3.40.50.2300 163 296 1.1E-55 T 13-10-2018 ambt_09195 6ddf60e330741f1153fff57492af0eb3 335 Pfam PF13377 Periplasmic binding protein-like domain 181 334 4.8E-24 T 13-10-2018 ambt_09195 6ddf60e330741f1153fff57492af0eb3 335 Gene3D G3DSA:3.40.50.2300 69 311 1.1E-55 T 13-10-2018 ambt_09195 6ddf60e330741f1153fff57492af0eb3 335 Gene3D G3DSA:1.10.260.40 1 64 2.7E-18 T 13-10-2018 ambt_09195 6ddf60e330741f1153fff57492af0eb3 335 SMART SM00354 7 77 3.6E-21 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_09195 6ddf60e330741f1153fff57492af0eb3 335 SUPERFAMILY SSF47413 6 64 6.75E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_14120 520890926d0fd636cf85757775aa913e 734 Gene3D G3DSA:3.40.50.300 4 212 9.8E-39 T 13-10-2018 ambt_14120 520890926d0fd636cf85757775aa913e 734 Pfam PF00271 Helicase conserved C-terminal domain 254 362 3.3E-14 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_14120 520890926d0fd636cf85757775aa913e 734 Pfam PF00270 DEAD/DEAH box helicase 26 197 9.0E-27 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_14120 520890926d0fd636cf85757775aa913e 734 Gene3D G3DSA:3.40.50.300 242 410 4.5E-21 T 13-10-2018 ambt_14120 520890926d0fd636cf85757775aa913e 734 SUPERFAMILY SSF52540 33 373 5.95E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14120 520890926d0fd636cf85757775aa913e 734 SMART SM00490 278 362 8.1E-11 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_14120 520890926d0fd636cf85757775aa913e 734 SMART SM00487 20 220 2.9E-29 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_20805 c55a19b16dfe7ea7bb4a8cd0964eda87 337 Pfam PF06834 TraU protein 36 322 1.3E-65 T 13-10-2018 IPR009649 TraU ambt_20805 c55a19b16dfe7ea7bb4a8cd0964eda87 337 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 34 328 9.1E-96 T 13-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 Pfam PF05746 DALR anticodon binding domain 459 576 2.4E-29 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 86 2.4E-22 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 Gene3D G3DSA:1.10.730.10 453 576 6.3E-33 T 13-10-2018 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 Gene3D G3DSA:3.30.1360.70 1 105 5.8E-30 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 576 9.5E-171 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 302 323 4.1E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 152 165 4.1E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 144 4.1E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 113 128 4.1E-25 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 SUPERFAMILY SSF55190 1 95 3.79E-21 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 SMART SM01016 5 86 2.7E-29 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 SUPERFAMILY SSF52374 109 452 1.51E-88 T 13-10-2018 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 SMART SM00836 459 576 1.3E-31 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 SUPERFAMILY SSF47323 453 576 2.16E-33 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 121 132 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 576 26.537 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 Gene3D G3DSA:3.40.50.620 107 452 2.5E-108 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_12810 33e2603f78adafb3a8fd90bd23263a0e 576 Pfam PF00750 tRNA synthetases class I (R) 100 445 1.4E-132 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 ambt_02930 259f325d7e05551cb2b3ca45f8bc75d1 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 103 188 1.9E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_02930 259f325d7e05551cb2b3ca45f8bc75d1 704 Gene3D G3DSA:2.170.130.10 97 190 1.2E-16 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_02930 259f325d7e05551cb2b3ca45f8bc75d1 704 Gene3D G3DSA:2.40.170.20 191 702 8.8E-41 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_02930 259f325d7e05551cb2b3ca45f8bc75d1 704 SUPERFAMILY SSF56935 102 688 5.83E-56 T 13-10-2018 ambt_02930 259f325d7e05551cb2b3ca45f8bc75d1 704 Pfam PF00593 TonB dependent receptor 207 685 5.5E-19 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_07855 253101996d5dcf2a44722c41f63c329e 246 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ambt_07855 253101996d5dcf2a44722c41f63c329e 246 Pfam PF00849 RNA pseudouridylate synthase 71 196 1.3E-14 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_07855 253101996d5dcf2a44722c41f63c329e 246 SUPERFAMILY SSF55120 68 232 1.73E-39 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_07855 253101996d5dcf2a44722c41f63c329e 246 SUPERFAMILY SSF55174 8 60 7.91E-13 T 13-10-2018 ambt_07855 253101996d5dcf2a44722c41f63c329e 246 SMART SM00363 7 64 1.5E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_07855 253101996d5dcf2a44722c41f63c329e 246 Gene3D G3DSA:3.30.70.1560 136 209 1.7E-55 T 13-10-2018 ambt_07855 253101996d5dcf2a44722c41f63c329e 246 Gene3D G3DSA:3.10.290.10 3 61 5.8E-21 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ambt_07855 253101996d5dcf2a44722c41f63c329e 246 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 75 228 3.3E-45 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ambt_07855 253101996d5dcf2a44722c41f63c329e 246 Pfam PF01479 S4 domain 8 52 5.3E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_07855 253101996d5dcf2a44722c41f63c329e 246 Gene3D G3DSA:3.30.70.580 73 231 1.7E-55 T 13-10-2018 ambt_01555 df3d9c84bafa1e089b00c3719f963c84 250 SUPERFAMILY SSF63848 144 249 6.15E-32 T 13-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 ambt_01555 df3d9c84bafa1e089b00c3719f963c84 250 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 4 99 2.6E-11 T 13-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 ambt_01555 df3d9c84bafa1e089b00c3719f963c84 250 Gene3D G3DSA:2.160.20.70 142 250 1.2E-33 T 13-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 ambt_01555 df3d9c84bafa1e089b00c3719f963c84 250 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 250 25.386 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 ambt_01555 df3d9c84bafa1e089b00c3719f963c84 250 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 146 247 1.9E-33 T 13-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 ambt_01555 df3d9c84bafa1e089b00c3719f963c84 250 Gene3D G3DSA:3.30.750.120 1 116 7.0E-17 T 13-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily ambt_01555 df3d9c84bafa1e089b00c3719f963c84 250 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 249 8.1E-58 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 ambt_09310 afb250504b7c76405a59af0d7f0551d7 447 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 1 434 33.287 T 13-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 ambt_09310 afb250504b7c76405a59af0d7f0551d7 447 SMART SM00471 59 264 3.2E-9 T 13-10-2018 IPR003607 HD/PDEase domain ambt_09310 afb250504b7c76405a59af0d7f0551d7 447 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 435 2.6E-117 T 13-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 ambt_09310 afb250504b7c76405a59af0d7f0551d7 447 Pfam PF01966 HD domain 63 143 3.5E-8 T 13-10-2018 IPR006674 HD domain ambt_09310 afb250504b7c76405a59af0d7f0551d7 447 Pfam PF13286 Phosphohydrolase-associated domain 341 430 1.1E-25 T 13-10-2018 IPR026875 Phosphohydrolase-associated domain ambt_09310 afb250504b7c76405a59af0d7f0551d7 447 SUPERFAMILY SSF109604 24 437 1.44E-79 T 13-10-2018 ambt_09310 afb250504b7c76405a59af0d7f0551d7 447 Gene3D G3DSA:1.10.3210.10 2 435 3.8E-98 T 13-10-2018 ambt_19975 6e207e66cab7cb774d12a9137711d1bd 150 Gene3D G3DSA:3.10.430.100 61 149 9.0E-29 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ambt_19975 6e207e66cab7cb774d12a9137711d1bd 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19975 6e207e66cab7cb774d12a9137711d1bd 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 8.7E-21 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19975 6e207e66cab7cb774d12a9137711d1bd 150 SUPERFAMILY SSF55653 60 148 1.19E-24 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ambt_19975 6e207e66cab7cb774d12a9137711d1bd 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.313 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19975 6e207e66cab7cb774d12a9137711d1bd 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 2.5E-24 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal ambt_19975 6e207e66cab7cb774d12a9137711d1bd 150 SUPERFAMILY SSF55658 1 57 8.72E-18 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ambt_19975 6e207e66cab7cb774d12a9137711d1bd 150 Gene3D G3DSA:3.40.5.10 1 50 4.6E-23 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19975 6e207e66cab7cb774d12a9137711d1bd 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 3.2E-52 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_02315 8ba053772684c2eb588210991e2b2905 891 Gene3D G3DSA:3.40.50.920 708 891 2.4E-66 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ambt_02315 8ba053772684c2eb588210991e2b2905 891 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 890 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ambt_02315 8ba053772684c2eb588210991e2b2905 891 Gene3D G3DSA:3.40.50.970 471 705 8.3E-109 T 13-10-2018 ambt_02315 8ba053772684c2eb588210991e2b2905 891 SUPERFAMILY SSF52922 705 890 5.02E-50 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ambt_02315 8ba053772684c2eb588210991e2b2905 891 Gene3D G3DSA:3.40.50.970 56 470 6.9E-131 T 13-10-2018 ambt_02315 8ba053772684c2eb588210991e2b2905 891 SUPERFAMILY SSF52518 57 467 2.4E-139 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_02315 8ba053772684c2eb588210991e2b2905 891 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 293 1.4E-9 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ambt_02315 8ba053772684c2eb588210991e2b2905 891 SUPERFAMILY SSF52518 472 700 2.65E-99 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_02315 8ba053772684c2eb588210991e2b2905 891 PIRSF PIRSF000156 1 891 0.0 T 13-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ambt_10425 6b2cfd85301eae2a24ea4a059d7b3ce1 356 Gene3D G3DSA:3.20.20.300 1 352 2.0E-105 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 ambt_10425 6b2cfd85301eae2a24ea4a059d7b3ce1 356 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 355 47.007 T 13-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 ambt_10425 6b2cfd85301eae2a24ea4a059d7b3ce1 356 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 314 6.2E-74 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ambt_10425 6b2cfd85301eae2a24ea4a059d7b3ce1 356 SUPERFAMILY SSF51445 2 324 2.42E-75 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_10685 ea41fe13e199167e78d135ba5cf827e2 118 Gene3D G3DSA:1.10.720.90 2 55 9.5E-24 T 13-10-2018 ambt_10685 ea41fe13e199167e78d135ba5cf827e2 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 13-10-2018 ambt_10685 ea41fe13e199167e78d135ba5cf827e2 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10685 ea41fe13e199167e78d135ba5cf827e2 118 Gene3D G3DSA:1.10.1900.20 56 118 1.1E-29 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10685 ea41fe13e199167e78d135ba5cf827e2 118 Pfam PF00453 Ribosomal protein L20 3 109 4.0E-50 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10685 ea41fe13e199167e78d135ba5cf827e2 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.4E-53 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10685 ea41fe13e199167e78d135ba5cf827e2 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10685 ea41fe13e199167e78d135ba5cf827e2 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10685 ea41fe13e199167e78d135ba5cf827e2 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-42 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10685 ea41fe13e199167e78d135ba5cf827e2 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.126 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10685 ea41fe13e199167e78d135ba5cf827e2 118 SUPERFAMILY SSF74731 3 117 8.11E-51 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 Gene3D G3DSA:1.20.140.10 242 389 6.9E-46 T 13-10-2018 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 131 143 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 384 2.5E-43 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 Gene3D G3DSA:2.40.110.10 128 241 2.3E-46 T 13-10-2018 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 SUPERFAMILY SSF56645 5 249 1.28E-86 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 343 362 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 PIRSF PIRSF016578 134 389 1.0E-9 T 13-10-2018 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 PIRSF PIRSF016578 17 103 0.12 T 13-10-2018 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 125 3.6E-36 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 Gene3D G3DSA:1.10.540.10 2 127 2.0E-46 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 224 3.5E-26 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ambt_10280 e9e9f034bf4ee8e71a09cb98d6ab3d17 389 SUPERFAMILY SSF47203 234 387 1.24E-46 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ambt_02170 a20950ae69d2d2c4593034488b2c5b98 111 Hamap MF_00910 Cell division protein FtsL [ftsL]. 25 108 15.861 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 ambt_02170 a20950ae69d2d2c4593034488b2c5b98 111 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 26 108 3.5E-20 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 ambt_02170 a20950ae69d2d2c4593034488b2c5b98 111 Pfam PF04999 Cell division protein FtsL 18 109 5.0E-30 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 ambt_02160 836a0d5adf667be0ac6d20f2f6f19f6c 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 4.7E-21 T 13-10-2018 IPR020603 MraZ domain ambt_02160 836a0d5adf667be0ac6d20f2f6f19f6c 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 131 3.6E-17 T 13-10-2018 IPR020603 MraZ domain ambt_02160 836a0d5adf667be0ac6d20f2f6f19f6c 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 54.568 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ambt_02160 836a0d5adf667be0ac6d20f2f6f19f6c 152 SUPERFAMILY SSF89447 1 135 9.42E-44 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily ambt_02160 836a0d5adf667be0ac6d20f2f6f19f6c 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 8.5E-54 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ambt_02160 836a0d5adf667be0ac6d20f2f6f19f6c 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 147 3.0E-64 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ambt_02160 836a0d5adf667be0ac6d20f2f6f19f6c 152 Gene3D G3DSA:2.40.330.20 1 149 9.8E-41 T 13-10-2018 IPR038619 MraZ superfamily ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 Gene3D G3DSA:1.20.1640.10 10 522 0.0 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 SUPERFAMILY SSF82693 575 681 1.94E-25 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 Gene3D G3DSA:3.30.2090.10 181 277 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 SUPERFAMILY SSF82866 298 498 4.58E-51 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 Gene3D G3DSA:1.20.1640.10 523 1033 0.0 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 Gene3D G3DSA:3.30.70.1440 679 876 0.0 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 SUPERFAMILY SSF82693 138 332 1.36E-28 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 SUPERFAMILY SSF82714 185 274 2.88E-19 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 Gene3D G3DSA:3.30.70.1430 40 827 0.0 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 SUPERFAMILY SSF82866 841 1038 7.85E-46 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 Gene3D G3DSA:3.30.70.1430 577 678 0.0 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 Gene3D G3DSA:3.30.70.1320 135 334 0.0 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 SUPERFAMILY SSF82693 41 134 8.63E-27 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1038 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 Pfam PF00873 AcrB/AcrD/AcrF family 3 1036 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 Gene3D G3DSA:3.30.2090.10 731 819 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 SUPERFAMILY SSF82693 682 867 1.88E-25 T 13-10-2018 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.2E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 2.2E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 2.2E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 2.2E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.2E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 2.2E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 2.2E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 2.2E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 2.2E-91 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02345 1b4e5e21e428c8de9b22beee3c665873 1040 SUPERFAMILY SSF82714 732 817 3.66E-20 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_08100 e983c8b7c8cbda53432602f0742c44e2 58 Pfam PF04957 Ribosome modulation factor 1 54 7.5E-31 T 13-10-2018 IPR007040 Ribosome modulation factor ambt_08100 e983c8b7c8cbda53432602f0742c44e2 58 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 51 3.0E-19 T 13-10-2018 IPR007040 Ribosome modulation factor ambt_08100 e983c8b7c8cbda53432602f0742c44e2 58 Gene3D G3DSA:1.10.10.620 1 56 1.1E-28 T 13-10-2018 IPR023200 Ribosome modulation factor domain superfamily ambt_08100 e983c8b7c8cbda53432602f0742c44e2 58 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 31.965 T 13-10-2018 IPR007040 Ribosome modulation factor ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 Pfam PF01336 OB-fold nucleic acid binding domain 19 102 3.6E-16 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 582 32.981 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 Gene3D G3DSA:3.30.930.10 116 579 2.4E-192 T 13-10-2018 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 Gene3D G3DSA:2.40.50.140 1 105 8.2E-33 T 13-10-2018 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 SUPERFAMILY SSF50249 1 105 9.71E-33 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.4E-25 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 516 530 1.4E-25 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 472 488 1.4E-25 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.4E-25 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 Gene3D G3DSA:3.30.1360.30 271 420 2.4E-192 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 SUPERFAMILY SSF55261 288 419 1.16E-45 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 556 1.3E-105 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 Pfam PF02938 GAD domain 307 406 2.2E-31 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 SUPERFAMILY SSF55681 108 580 9.76E-104 T 13-10-2018 ambt_12135 5ff0051ba14ea3179d4f5b6655f02140 586 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 7.5E-252 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 ambt_05230 c2677216855263c556f7e973ea1499a6 385 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 112 356 1.0E-97 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ambt_05230 c2677216855263c556f7e973ea1499a6 385 SUPERFAMILY SSF52540 115 357 2.92E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_05230 c2677216855263c556f7e973ea1499a6 385 Hamap MF_02040 Iron-sulfur cluster carrier protein. 108 357 36.063 T 13-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein ambt_05230 c2677216855263c556f7e973ea1499a6 385 Gene3D G3DSA:3.40.50.300 101 353 1.9E-80 T 13-10-2018 ambt_05230 c2677216855263c556f7e973ea1499a6 385 ProSitePatterns PS01215 Mrp family signature. 220 236 - T 13-10-2018 IPR000808 Mrp, conserved site GO:0005524 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 Pfam PF00204 DNA gyrase B 218 385 4.0E-40 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR00418 DNA topoisomerase II family signature 31 46 9.8E-58 T 13-10-2018 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR00418 DNA topoisomerase II family signature 66 79 9.8E-58 T 13-10-2018 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR00418 DNA topoisomerase II family signature 267 280 9.8E-58 T 13-10-2018 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR00418 DNA topoisomerase II family signature 518 530 9.8E-58 T 13-10-2018 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR00418 DNA topoisomerase II family signature 109 123 9.8E-58 T 13-10-2018 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR00418 DNA topoisomerase II family signature 480 496 9.8E-58 T 13-10-2018 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR00418 DNA topoisomerase II family signature 563 579 9.8E-58 T 13-10-2018 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR00418 DNA topoisomerase II family signature 415 429 9.8E-58 T 13-10-2018 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR00418 DNA topoisomerase II family signature 498 515 9.8E-58 T 13-10-2018 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 SUPERFAMILY SSF55874 4 215 3.59E-65 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 626 0.0 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 Pfam PF01751 Toprim domain 414 523 1.2E-12 T 13-10-2018 IPR006171 TOPRIM domain ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 1.8E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 Gene3D G3DSA:3.40.50.670 391 624 4.1E-89 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 SUPERFAMILY SSF54211 217 382 6.64E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 417 425 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 SUPERFAMILY SSF56719 389 622 3.92E-77 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 504 520 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 312 327 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 363 388 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 449 470 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 295 311 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 470 482 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 538 560 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 339 362 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 5.7E-118 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 Gene3D G3DSA:3.30.565.10 2 215 2.3E-74 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 SMART SM00433 34 625 2.3E-201 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 Gene3D G3DSA:3.30.230.10 216 390 3.5E-54 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 559 621 2.9E-24 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 SMART SM00387 27 173 6.0E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_15290 958b6db831bf2ed91ab2f03f52bbaccb 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 629 46.541 T 13-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_10835 948bc7455c423834eb0f953534c1152b 495 PIRSF PIRSF036557 1 477 1.4E-169 T 13-10-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria ambt_10835 948bc7455c423834eb0f953534c1152b 495 Gene3D G3DSA:3.30.465.10 192 356 6.0E-52 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ambt_10835 948bc7455c423834eb0f953534c1152b 495 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 2 464 2.3E-164 T 13-10-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 ambt_10835 948bc7455c423834eb0f953534c1152b 495 Pfam PF01799 [2Fe-2S] binding domain 84 155 9.4E-31 T 13-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ambt_10835 948bc7455c423834eb0f953534c1152b 495 SMART SM01092 363 465 1.7E-26 T 13-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal ambt_10835 948bc7455c423834eb0f953534c1152b 495 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 192 355 4.0E-46 T 13-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 ambt_10835 948bc7455c423834eb0f953534c1152b 495 Gene3D G3DSA:3.30.390.50 363 466 3.7E-25 T 13-10-2018 ambt_10835 948bc7455c423834eb0f953534c1152b 495 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 39 47 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ambt_10835 948bc7455c423834eb0f953534c1152b 495 SUPERFAMILY SSF47741 94 180 4.32E-34 T 13-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily ambt_10835 948bc7455c423834eb0f953534c1152b 495 SUPERFAMILY SSF56176 191 355 1.59E-48 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ambt_10835 948bc7455c423834eb0f953534c1152b 495 SUPERFAMILY SSF55447 360 468 5.63E-27 T 13-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily ambt_10835 948bc7455c423834eb0f953534c1152b 495 SUPERFAMILY SSF54292 2 87 3.41E-19 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ambt_10835 948bc7455c423834eb0f953534c1152b 495 Gene3D G3DSA:1.10.150.120 87 190 7.7E-33 T 13-10-2018 ambt_10835 948bc7455c423834eb0f953534c1152b 495 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 364 464 8.8E-27 T 13-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal ambt_10835 948bc7455c423834eb0f953534c1152b 495 Gene3D G3DSA:3.10.20.30 1 86 4.9E-26 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_10835 948bc7455c423834eb0f953534c1152b 495 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 73 5.1E-5 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ambt_18775 5a4b653bc2a260628395e3bbb9453b24 545 SUPERFAMILY SSF52025 120 242 1.44E-13 T 13-10-2018 ambt_18775 5a4b653bc2a260628395e3bbb9453b24 545 Pfam PF02225 PA domain 131 205 6.7E-7 T 13-10-2018 IPR003137 PA domain ambt_18775 5a4b653bc2a260628395e3bbb9453b24 545 Gene3D G3DSA:3.50.30.30 109 251 1.8E-7 T 13-10-2018 ambt_18775 5a4b653bc2a260628395e3bbb9453b24 545 Gene3D G3DSA:3.40.630.10 252 534 1.2E-52 T 13-10-2018 ambt_18775 5a4b653bc2a260628395e3bbb9453b24 545 SUPERFAMILY SSF53187 32 528 2.06E-66 T 13-10-2018 ambt_18775 5a4b653bc2a260628395e3bbb9453b24 545 Pfam PF04389 Peptidase family M28 299 518 7.1E-43 T 13-10-2018 IPR007484 Peptidase M28 ambt_18775 5a4b653bc2a260628395e3bbb9453b24 545 Gene3D G3DSA:3.40.630.10 25 100 1.2E-5 T 13-10-2018 ambt_20095 a7ef7e0861d32518a333dab267edaf14 320 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 33 50 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ambt_20095 a7ef7e0861d32518a333dab267edaf14 320 PRINTS PR00069 Aldo-keto reductase signature 29 53 5.3E-47 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_20095 a7ef7e0861d32518a333dab267edaf14 320 PRINTS PR00069 Aldo-keto reductase signature 148 165 5.3E-47 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_20095 a7ef7e0861d32518a333dab267edaf14 320 PRINTS PR00069 Aldo-keto reductase signature 231 255 5.3E-47 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_20095 a7ef7e0861d32518a333dab267edaf14 320 PRINTS PR00069 Aldo-keto reductase signature 89 107 5.3E-47 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_20095 a7ef7e0861d32518a333dab267edaf14 320 PRINTS PR00069 Aldo-keto reductase signature 182 211 5.3E-47 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_20095 a7ef7e0861d32518a333dab267edaf14 320 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 264 279 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ambt_20095 a7ef7e0861d32518a333dab267edaf14 320 SUPERFAMILY SSF51430 6 304 4.45E-86 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_20095 a7ef7e0861d32518a333dab267edaf14 320 PIRSF PIRSF000097 1 318 2.7E-111 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_20095 a7ef7e0861d32518a333dab267edaf14 320 Pfam PF00248 Aldo/keto reductase family 10 295 5.8E-42 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain ambt_20095 a7ef7e0861d32518a333dab267edaf14 320 Gene3D G3DSA:3.20.20.100 1 313 7.2E-114 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_09080 a905ded88fadb262bd78e9401af1a7a2 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 145 1.8E-49 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 ambt_09080 a905ded88fadb262bd78e9401af1a7a2 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.564 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 ambt_19935 0d06a990a07cacac400d1a6f28788685 461 SUPERFAMILY SSF52540 193 444 6.72E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19935 0d06a990a07cacac400d1a6f28788685 461 SUPERFAMILY SSF48024 15 126 2.88E-38 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 ambt_19935 0d06a990a07cacac400d1a6f28788685 461 Pfam PF03796 DnaB-like helicase C terminal domain 195 451 1.7E-112 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 ambt_19935 0d06a990a07cacac400d1a6f28788685 461 Gene3D G3DSA:1.10.860.10 9 172 5.2E-55 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ambt_19935 0d06a990a07cacac400d1a6f28788685 461 SMART SM00382 212 418 2.1E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_19935 0d06a990a07cacac400d1a6f28788685 461 Gene3D G3DSA:3.40.50.300 173 454 4.9E-105 T 13-10-2018 ambt_19935 0d06a990a07cacac400d1a6f28788685 461 Pfam PF00772 DnaB-like helicase N terminal domain 17 118 5.7E-37 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 ambt_19935 0d06a990a07cacac400d1a6f28788685 461 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 17 453 1.0E-174 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 ambt_13690 eb9710b25caa525c8698a060481a5fca 185 Gene3D G3DSA:1.10.132.20 12 182 1.8E-66 T 13-10-2018 ambt_13690 eb9710b25caa525c8698a060481a5fca 185 SUPERFAMILY SSF55194 3 184 3.53E-69 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 ambt_13690 eb9710b25caa525c8698a060481a5fca 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.1E-72 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ambt_13690 eb9710b25caa525c8698a060481a5fca 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.118 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ambt_13690 eb9710b25caa525c8698a060481a5fca 185 Gene3D G3DSA:3.30.1360.40 31 105 1.8E-66 T 13-10-2018 ambt_13690 eb9710b25caa525c8698a060481a5fca 185 Pfam PF01765 Ribosome recycling factor 20 183 9.7E-61 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 ambt_15315 10f6b99eeff0464e6ec3fbd268983b45 455 Gene3D G3DSA:1.20.1600.10 21 453 1.3E-124 T 13-10-2018 ambt_15315 10f6b99eeff0464e6ec3fbd268983b45 455 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 20 443 2.8E-112 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 ambt_15315 10f6b99eeff0464e6ec3fbd268983b45 455 Pfam PF02321 Outer membrane efflux protein 24 220 2.8E-29 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_15315 10f6b99eeff0464e6ec3fbd268983b45 455 Pfam PF02321 Outer membrane efflux protein 245 434 2.4E-31 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_15315 10f6b99eeff0464e6ec3fbd268983b45 455 SUPERFAMILY SSF56954 2 436 1.44E-93 T 13-10-2018 ambt_13700 099163cbf1c5a4072f428e221a6d67d1 290 SUPERFAMILY SSF54713 147 286 2.35E-53 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ambt_13700 099163cbf1c5a4072f428e221a6d67d1 290 Gene3D G3DSA:3.30.479.20 56 146 1.2E-24 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ambt_13700 099163cbf1c5a4072f428e221a6d67d1 290 Hamap MF_00050 Elongation factor Ts [tsf]. 1 285 79.904 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_13700 099163cbf1c5a4072f428e221a6d67d1 290 SUPERFAMILY SSF54713 55 144 3.49E-19 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ambt_13700 099163cbf1c5a4072f428e221a6d67d1 290 SUPERFAMILY SSF46934 1 55 1.75E-18 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 ambt_13700 099163cbf1c5a4072f428e221a6d67d1 290 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 286 2.3E-112 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_13700 099163cbf1c5a4072f428e221a6d67d1 290 Gene3D G3DSA:1.10.8.10 1 55 1.7E-25 T 13-10-2018 ambt_13700 099163cbf1c5a4072f428e221a6d67d1 290 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_13700 099163cbf1c5a4072f428e221a6d67d1 290 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_13700 099163cbf1c5a4072f428e221a6d67d1 290 Pfam PF00889 Elongation factor TS 70 268 3.4E-66 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 ambt_13700 099163cbf1c5a4072f428e221a6d67d1 290 Gene3D G3DSA:1.10.286.20 192 231 9.0E-23 T 13-10-2018 ambt_00030 98b28969fec0806d80855dced912503e 692 SMART SM00836 584 686 7.2E-5 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ambt_00030 98b28969fec0806d80855dced912503e 692 SUPERFAMILY SSF47323 583 680 2.55E-7 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_00030 98b28969fec0806d80855dced912503e 692 SUPERFAMILY SSF109604 341 491 5.65E-13 T 13-10-2018 ambt_00030 98b28969fec0806d80855dced912503e 692 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 689 25.883 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00030 98b28969fec0806d80855dced912503e 692 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 549 4.2E-206 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00030 98b28969fec0806d80855dced912503e 692 Pfam PF05746 DALR anticodon binding domain 581 683 1.8E-14 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ambt_00030 98b28969fec0806d80855dced912503e 692 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 689 4.2E-263 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00030 98b28969fec0806d80855dced912503e 692 Gene3D G3DSA:1.10.730.10 573 685 2.4E-9 T 13-10-2018 ambt_00030 98b28969fec0806d80855dced912503e 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 1.2E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00030 98b28969fec0806d80855dced912503e 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.2E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00030 98b28969fec0806d80855dced912503e 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.2E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00030 98b28969fec0806d80855dced912503e 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.2E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00030 98b28969fec0806d80855dced912503e 692 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 1.2E-35 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_11775 8df6fa67c800fc759b9277e452a392c3 322 SMART SM00729 11 230 2.9E-5 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ambt_11775 8df6fa67c800fc759b9277e452a392c3 322 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 17 28 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_11775 8df6fa67c800fc759b9277e452a392c3 322 Gene3D G3DSA:3.20.20.70 1 322 7.2E-74 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_11775 8df6fa67c800fc759b9277e452a392c3 322 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 2 322 3.3E-96 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_11775 8df6fa67c800fc759b9277e452a392c3 322 Pfam PF13353 4Fe-4S single cluster domain 18 120 9.2E-6 T 13-10-2018 ambt_11775 8df6fa67c800fc759b9277e452a392c3 322 Pfam PF04055 Radical SAM superfamily 16 175 1.0E-23 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_11775 8df6fa67c800fc759b9277e452a392c3 322 SUPERFAMILY SSF102114 4 272 4.71E-67 T 13-10-2018 ambt_11775 8df6fa67c800fc759b9277e452a392c3 322 Pfam PF06463 Molybdenum Cofactor Synthesis C 181 305 5.8E-31 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_21690 2ebe790e358792b118fcace48f31ebef 450 Pfam PF01522 Polysaccharide deacetylase 164 302 3.7E-22 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ambt_21690 2ebe790e358792b118fcace48f31ebef 450 Gene3D G3DSA:3.20.20.370 107 338 1.6E-55 T 13-10-2018 ambt_21690 2ebe790e358792b118fcace48f31ebef 450 SUPERFAMILY SSF88713 127 309 2.06E-31 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 6.0E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 6.0E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 6.0E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.0E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 SUPERFAMILY SSF81271 279 360 1.37E-36 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 PIRSF PIRSF006641 1 363 4.2E-158 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.869 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 Gene3D G3DSA:3.40.50.300 4 278 7.3E-153 T 13-10-2018 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.5E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 SUPERFAMILY SSF52540 3 301 3.01E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 Gene3D G3DSA:3.10.20.30 48 361 7.3E-153 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 5.3E-167 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 Gene3D G3DSA:1.10.150.300 113 200 7.3E-153 T 13-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 ambt_11210 bf241f589dde6a756b01c4379b3c0d6a 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 9.6E-40 T 13-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 ambt_09470 b94d28a8a72ec6043a0af7dafee24daf 152 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 74 1.8E-25 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ambt_09470 b94d28a8a72ec6043a0af7dafee24daf 152 Pfam PF03840 Preprotein translocase SecG subunit 5 73 3.5E-21 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ambt_09470 b94d28a8a72ec6043a0af7dafee24daf 152 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 6.3E-37 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ambt_09470 b94d28a8a72ec6043a0af7dafee24daf 152 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 6.3E-37 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ambt_09470 b94d28a8a72ec6043a0af7dafee24daf 152 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 6.3E-37 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ambt_09470 b94d28a8a72ec6043a0af7dafee24daf 152 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 6.3E-37 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ambt_11340 831c4f98c44c6e687bd4631672e2e576 400 Pfam PF10082 Putative beta-barrel porin 2 39 399 1.7E-24 T 13-10-2018 IPR018759 Putative beta-barrel porin 2 ambt_00560 2602c01506c176459a1a3e0ee404e023 258 SUPERFAMILY SSF53335 23 208 3.77E-25 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_00560 2602c01506c176459a1a3e0ee404e023 258 Pfam PF05175 Methyltransferase small domain 40 140 1.3E-13 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ambt_00560 2602c01506c176459a1a3e0ee404e023 258 Gene3D G3DSA:3.40.50.150 17 254 4.4E-55 T 13-10-2018 ambt_00560 2602c01506c176459a1a3e0ee404e023 258 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 126 132 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ambt_00560 2602c01506c176459a1a3e0ee404e023 258 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 20 258 49.701 T 13-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 ambt_10925 64006ae7fe095b830b186cd5872a98d2 456 SUPERFAMILY SSF56349 126 445 2.69E-39 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_10925 64006ae7fe095b830b186cd5872a98d2 456 Gene3D G3DSA:1.10.443.10 264 450 1.5E-32 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_10925 64006ae7fe095b830b186cd5872a98d2 456 Gene3D G3DSA:3.30.160.390 8 111 1.1E-7 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily ambt_10925 64006ae7fe095b830b186cd5872a98d2 456 Gene3D G3DSA:1.10.150.130 112 231 9.0E-7 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_10925 64006ae7fe095b830b186cd5872a98d2 456 Pfam PF00589 Phage integrase family 289 437 4.7E-20 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_17890 50ca9c89f284d0c80d30e41478724220 195 Gene3D G3DSA:3.10.450.50 7 195 3.8E-47 T 13-10-2018 ambt_17890 50ca9c89f284d0c80d30e41478724220 195 Pfam PF00866 Ring hydroxylating beta subunit 42 186 1.5E-27 T 13-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 ambt_17890 50ca9c89f284d0c80d30e41478724220 195 SUPERFAMILY SSF54427 23 195 7.4E-32 T 13-10-2018 IPR032710 NTF2-like domain superfamily ambt_06575 2c6c74d4ccf8427f120c71fab999cdf3 706 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 611 691 3.4E-6 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_06575 2c6c74d4ccf8427f120c71fab999cdf3 706 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 480 573 6.7E-25 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_06575 2c6c74d4ccf8427f120c71fab999cdf3 706 Gene3D G3DSA:3.40.50.720 297 480 4.1E-69 T 13-10-2018 ambt_06575 2c6c74d4ccf8427f120c71fab999cdf3 706 SUPERFAMILY SSF48179 605 701 1.36E-20 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_06575 2c6c74d4ccf8427f120c71fab999cdf3 706 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 194 2.2E-28 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ambt_06575 2c6c74d4ccf8427f120c71fab999cdf3 706 SUPERFAMILY SSF51735 296 476 7.5E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_06575 2c6c74d4ccf8427f120c71fab999cdf3 706 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 299 475 2.2E-65 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_06575 2c6c74d4ccf8427f120c71fab999cdf3 706 Gene3D G3DSA:3.90.226.10 2 294 7.3E-68 T 13-10-2018 ambt_06575 2c6c74d4ccf8427f120c71fab999cdf3 706 Gene3D G3DSA:1.10.1040.50 482 705 1.2E-72 T 13-10-2018 ambt_06575 2c6c74d4ccf8427f120c71fab999cdf3 706 SUPERFAMILY SSF48179 480 623 1.79E-26 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_06575 2c6c74d4ccf8427f120c71fab999cdf3 706 SUPERFAMILY SSF52096 4 289 3.32E-49 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_08950 1bea8ce038ad39ecb01a8a15da69c169 293 Gene3D G3DSA:3.40.50.300 17 292 7.2E-76 T 13-10-2018 ambt_08950 1bea8ce038ad39ecb01a8a15da69c169 293 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 47 163 7.4E-5 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 ambt_08950 1bea8ce038ad39ecb01a8a15da69c169 293 SUPERFAMILY SSF52540 32 260 3.51E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_17970 aafc9249d48882567a7f13a6d82cb848 287 Gene3D G3DSA:3.40.50.300 1 282 9.4E-35 T 13-10-2018 ambt_17970 aafc9249d48882567a7f13a6d82cb848 287 Pfam PF13614 AAA domain 1 191 4.0E-15 T 13-10-2018 IPR025669 AAA domain ambt_17970 aafc9249d48882567a7f13a6d82cb848 287 SUPERFAMILY SSF52540 1 279 2.36E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 Gene3D G3DSA:3.30.70.870 440 490 1.3E-26 T 13-10-2018 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 SUPERFAMILY SSF52540 6 288 4.13E-106 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 Pfam PF00679 Elongation factor G C-terminus 608 694 1.6E-29 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 SUPERFAMILY SSF54211 486 607 1.06E-45 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 700 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 Gene3D G3DSA:3.30.70.240 612 683 7.1E-92 T 13-10-2018 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 SUPERFAMILY SSF54980 611 699 1.92E-29 T 13-10-2018 IPR035647 EF-G domain III/V-like ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 Pfam PF03144 Elongation factor Tu domain 2 331 398 6.4E-17 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 Gene3D G3DSA:2.40.30.10 300 423 5.9E-50 T 13-10-2018 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 Pfam PF14492 Elongation Factor G, domain II 411 485 1.7E-33 T 13-10-2018 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 Hamap MF_00054_B Elongation factor G [fusA]. 6 700 112.751 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 Gene3D G3DSA:3.30.230.10 491 696 7.1E-92 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.8E-66 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 SMART SM00889 487 606 1.1E-76 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 SUPERFAMILY SSF50447 271 411 6.83E-36 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 4.5E-34 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 SUPERFAMILY SSF54980 411 488 1.29E-24 T 13-10-2018 IPR035647 EF-G domain III/V-like ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 SMART SM00838 608 696 2.0E-56 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 Gene3D G3DSA:3.40.50.300 2 299 4.4E-115 T 13-10-2018 ambt_19615 e5e9aeec1a156f49bfeebe6ecdaa893f 701 Pfam PF03764 Elongation factor G, domain IV 486 606 2.5E-48 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ambt_09695 e9ad601c21346ebaa96f89785ff8081e 429 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 231 402 8.4E-31 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ambt_09695 e9ad601c21346ebaa96f89785ff8081e 429 SMART SM00044 161 408 5.6E-11 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ambt_09695 e9ad601c21346ebaa96f89785ff8081e 429 SUPERFAMILY SSF55073 232 400 2.51E-32 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_09695 e9ad601c21346ebaa96f89785ff8081e 429 Gene3D G3DSA:3.30.70.1230 227 421 2.2E-35 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_12355 118c56fab508e13fac47697c03c3324b 712 SUPERFAMILY SSF48179 501 600 4.42E-27 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_12355 118c56fab508e13fac47697c03c3324b 712 Gene3D G3DSA:3.90.226.10 7 309 9.6E-97 T 13-10-2018 ambt_12355 118c56fab508e13fac47697c03c3324b 712 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 498 523 - T 13-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_12355 118c56fab508e13fac47697c03c3324b 712 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 501 594 8.4E-24 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_12355 118c56fab508e13fac47697c03c3324b 712 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 624 708 1.9E-4 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_12355 118c56fab508e13fac47697c03c3324b 712 Gene3D G3DSA:1.10.1040.50 504 707 4.7E-70 T 13-10-2018 ambt_12355 118c56fab508e13fac47697c03c3324b 712 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 319 498 4.0E-57 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_12355 118c56fab508e13fac47697c03c3324b 712 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 211 6.7E-43 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ambt_12355 118c56fab508e13fac47697c03c3324b 712 SUPERFAMILY SSF52096 10 308 1.21E-68 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_12355 118c56fab508e13fac47697c03c3324b 712 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 11 712 0.0 T 13-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_12355 118c56fab508e13fac47697c03c3324b 712 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ambt_12355 118c56fab508e13fac47697c03c3324b 712 SUPERFAMILY SSF51735 316 498 1.39E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_12355 118c56fab508e13fac47697c03c3324b 712 Gene3D G3DSA:3.40.50.720 310 503 1.7E-63 T 13-10-2018 ambt_12355 118c56fab508e13fac47697c03c3324b 712 SUPERFAMILY SSF48179 619 712 1.7E-24 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_16865 f1850c90e8f8de3ac91c2dacf45ba6bb 675 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 230 356 1.8E-11 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_16865 f1850c90e8f8de3ac91c2dacf45ba6bb 675 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 472 593 1.5E-28 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_16865 f1850c90e8f8de3ac91c2dacf45ba6bb 675 SUPERFAMILY SSF52540 214 409 1.43E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_16865 f1850c90e8f8de3ac91c2dacf45ba6bb 675 SUPERFAMILY SSF52540 450 639 7.89E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_16865 f1850c90e8f8de3ac91c2dacf45ba6bb 675 SMART SM00382 226 360 0.0011 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_16865 f1850c90e8f8de3ac91c2dacf45ba6bb 675 SMART SM00382 468 597 1.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_16865 f1850c90e8f8de3ac91c2dacf45ba6bb 675 Gene3D G3DSA:3.40.50.300 179 374 1.1E-20 T 13-10-2018 ambt_16865 f1850c90e8f8de3ac91c2dacf45ba6bb 675 Gene3D G3DSA:3.40.50.300 399 615 2.5E-39 T 13-10-2018 ambt_16865 f1850c90e8f8de3ac91c2dacf45ba6bb 675 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ambt_11620 beaabc03106b234b4d2c28075aa357a6 298 Gene3D G3DSA:3.10.290.10 1 58 1.9E-21 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ambt_11620 beaabc03106b234b4d2c28075aa357a6 298 Pfam PF00849 RNA pseudouridylate synthase 66 202 7.8E-16 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_11620 beaabc03106b234b4d2c28075aa357a6 298 Pfam PF01479 S4 domain 4 44 2.7E-12 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_11620 beaabc03106b234b4d2c28075aa357a6 298 SUPERFAMILY SSF55174 5 95 2.65E-14 T 13-10-2018 ambt_11620 beaabc03106b234b4d2c28075aa357a6 298 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ambt_11620 beaabc03106b234b4d2c28075aa357a6 298 SMART SM00363 3 60 7.2E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_11620 beaabc03106b234b4d2c28075aa357a6 298 Gene3D G3DSA:3.30.70.1560 128 224 3.9E-54 T 13-10-2018 ambt_11620 beaabc03106b234b4d2c28075aa357a6 298 SUPERFAMILY SSF55120 66 239 1.52E-43 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_11620 beaabc03106b234b4d2c28075aa357a6 298 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 235 9.3E-56 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ambt_11620 beaabc03106b234b4d2c28075aa357a6 298 Gene3D G3DSA:3.30.70.580 67 232 3.9E-54 T 13-10-2018 ambt_04175 f80612bf1cc97c6fde281ccf87e181bf 1360 SUPERFAMILY SSF53300 474 684 7.91E-6 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_04175 f80612bf1cc97c6fde281ccf87e181bf 1360 SUPERFAMILY SSF50998 858 1142 9.29E-14 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ambt_04175 f80612bf1cc97c6fde281ccf87e181bf 1360 Gene3D G3DSA:3.40.50.410 41 160 3.4E-7 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_04175 f80612bf1cc97c6fde281ccf87e181bf 1360 Pfam PF05567 Neisseria PilC beta-propeller domain 873 1089 2.4E-21 T 13-10-2018 IPR008707 PilC beta-propeller domain ambt_14770 69bf92bebc88bd9f1c57a27cacbbf5d1 240 SUPERFAMILY SSF52833 105 238 2.85E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_14770 69bf92bebc88bd9f1c57a27cacbbf5d1 240 Pfam PF13098 Thioredoxin-like domain 113 235 6.9E-27 T 13-10-2018 IPR012336 Thioredoxin-like fold ambt_14770 69bf92bebc88bd9f1c57a27cacbbf5d1 240 Gene3D G3DSA:3.40.30.10 85 240 3.2E-48 T 13-10-2018 ambt_14770 69bf92bebc88bd9f1c57a27cacbbf5d1 240 Pfam PF10411 Disulfide bond isomerase protein N-terminus 32 83 2.9E-14 T 13-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ambt_14770 69bf92bebc88bd9f1c57a27cacbbf5d1 240 Gene3D G3DSA:3.10.450.70 24 84 2.3E-18 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 ambt_14770 69bf92bebc88bd9f1c57a27cacbbf5d1 240 SUPERFAMILY SSF54423 27 84 4.12E-11 T 13-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 ambt_14770 69bf92bebc88bd9f1c57a27cacbbf5d1 240 ProSitePatterns PS00194 Thioredoxin family active site. 120 138 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 7.2E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 4.4E-11 T 13-10-2018 IPR004176 Clp, N-terminal ambt_04470 b67a2a1e838357da7f18cad813263af7 858 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 1.7E-13 T 13-10-2018 IPR004176 Clp, N-terminal ambt_04470 b67a2a1e838357da7f18cad813263af7 858 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 Gene3D G3DSA:3.40.50.300 550 764 2.0E-89 T 13-10-2018 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 SUPERFAMILY SSF52540 546 854 2.59E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04470 b67a2a1e838357da7f18cad813263af7 858 SMART SM00382 597 736 4.0E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_04470 b67a2a1e838357da7f18cad813263af7 858 SMART SM00382 198 343 1.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_04470 b67a2a1e838357da7f18cad813263af7 858 SUPERFAMILY SSF81923 4 156 7.46E-41 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 4.3E-56 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 Gene3D G3DSA:1.10.8.60 766 858 1.6E-26 T 13-10-2018 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 Gene3D G3DSA:3.40.50.300 348 544 1.6E-65 T 13-10-2018 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 Gene3D G3DSA:1.10.1780.10 1 148 9.2E-31 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 Gene3D G3DSA:3.40.50.300 158 347 2.9E-74 T 13-10-2018 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 855 0.0 T 13-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 SMART SM01086 766 855 5.1E-35 T 13-10-2018 IPR019489 Clp ATPase, C-terminal ambt_04470 b67a2a1e838357da7f18cad813263af7 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 ambt_04470 b67a2a1e838357da7f18cad813263af7 858 SUPERFAMILY SSF52540 159 545 7.42E-99 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04470 b67a2a1e838357da7f18cad813263af7 858 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 846 2.8E-24 T 13-10-2018 IPR019489 Clp ATPase, C-terminal ambt_13275 7e349065f2f99110c83eb8804bbe3f5e 444 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_13275 7e349065f2f99110c83eb8804bbe3f5e 444 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 358 1.3E-72 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_13275 7e349065f2f99110c83eb8804bbe3f5e 444 SMART SM00382 159 342 3.4E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13275 7e349065f2f99110c83eb8804bbe3f5e 444 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 11 437 7.0E-173 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_13275 7e349065f2f99110c83eb8804bbe3f5e 444 Gene3D G3DSA:3.40.50.12240 18 440 2.7E-152 T 13-10-2018 ambt_13275 7e349065f2f99110c83eb8804bbe3f5e 444 SUPERFAMILY SSF52540 95 364 1.45E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13275 7e349065f2f99110c83eb8804bbe3f5e 444 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 25 436 3.9E-195 T 13-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_11820 2b539c7f8c69290c170f9680ebefc7a1 223 Pfam PF13500 AAA domain 2 207 2.5E-34 T 13-10-2018 ambt_11820 2b539c7f8c69290c170f9680ebefc7a1 223 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 176 9.5E-49 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ambt_11820 2b539c7f8c69290c170f9680ebefc7a1 223 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 213 28.891 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ambt_11820 2b539c7f8c69290c170f9680ebefc7a1 223 PIRSF PIRSF006755 1 223 3.6E-67 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ambt_11820 2b539c7f8c69290c170f9680ebefc7a1 223 Gene3D G3DSA:3.40.50.300 1 220 5.0E-61 T 13-10-2018 ambt_11820 2b539c7f8c69290c170f9680ebefc7a1 223 SUPERFAMILY SSF52540 1 212 7.53E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15445 24147816c2199fff4db148cefcf0047e 1043 PRINTS PR00702 Acriflavin resistance protein family signature 42 60 6.8E-20 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 6.8E-20 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 6.8E-20 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 6.8E-20 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 6.8E-20 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 Pfam PF00873 AcrB/AcrD/AcrF family 9 1022 7.9E-142 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 Gene3D G3DSA:3.30.70.1430 44 813 1.2E-233 T 13-10-2018 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 Gene3D G3DSA:3.30.2090.10 179 272 1.2E-233 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_15445 24147816c2199fff4db148cefcf0047e 1043 Gene3D G3DSA:1.20.1640.10 15 510 1.2E-233 T 13-10-2018 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 Gene3D G3DSA:3.30.70.1430 572 672 1.2E-233 T 13-10-2018 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 Gene3D G3DSA:3.30.70.1440 673 862 1.2E-233 T 13-10-2018 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 SUPERFAMILY SSF82866 297 493 3.66E-31 T 13-10-2018 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 SUPERFAMILY SSF82714 728 801 5.62E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_15445 24147816c2199fff4db148cefcf0047e 1043 Gene3D G3DSA:1.20.1640.10 511 1022 1.2E-233 T 13-10-2018 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 SUPERFAMILY SSF82866 803 1025 2.75E-41 T 13-10-2018 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 SUPERFAMILY SSF82693 45 134 1.12E-15 T 13-10-2018 ambt_15445 24147816c2199fff4db148cefcf0047e 1043 SUPERFAMILY SSF82714 182 265 9.55E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_15445 24147816c2199fff4db148cefcf0047e 1043 Gene3D G3DSA:3.30.2090.10 718 805 1.2E-233 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_15445 24147816c2199fff4db148cefcf0047e 1043 Gene3D G3DSA:3.30.70.1320 137 327 1.2E-233 T 13-10-2018 ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 SUPERFAMILY SSF55073 260 408 6.28E-34 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 Gene3D G3DSA:3.40.50.2300 1 122 6.0E-15 T 13-10-2018 ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 Gene3D G3DSA:3.30.70.270 255 411 1.6E-42 T 13-10-2018 ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 SMART SM00267 244 409 8.7E-45 T 13-10-2018 IPR000160 GGDEF domain ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 408 6.6E-39 T 13-10-2018 IPR000160 GGDEF domain ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 Pfam PF00072 Response regulator receiver domain 126 234 7.4E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 Pfam PF00072 Response regulator receiver domain 4 104 3.4E-8 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 SUPERFAMILY SSF52172 2 120 3.13E-16 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 Gene3D G3DSA:3.40.50.2300 123 254 1.7E-30 T 13-10-2018 ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 SUPERFAMILY SSF52172 125 268 1.57E-32 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 405 6.2E-36 T 13-10-2018 IPR000160 GGDEF domain ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 SMART SM00448 124 238 2.6E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01710 0145e8f41fccd21fab16c011d7a6a85e 411 SMART SM00448 2 115 5.9E-10 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_03860 dd7829497ec46402deb4b8a4946e6ae0 672 SUPERFAMILY SSF48695 222 441 3.8E-21 T 13-10-2018 IPR036280 Multiheme cytochrome superfamily ambt_03860 dd7829497ec46402deb4b8a4946e6ae0 672 Gene3D G3DSA:1.10.1130.10 220 329 4.2E-6 T 13-10-2018 ambt_03860 dd7829497ec46402deb4b8a4946e6ae0 672 Pfam PF13435 Cytochrome c554 and c-prime 372 434 0.029 T 13-10-2018 IPR023155 Cytochrome c-552/4 ambt_03860 dd7829497ec46402deb4b8a4946e6ae0 672 Pfam PF13435 Cytochrome c554 and c-prime 226 311 1.7E-6 T 13-10-2018 IPR023155 Cytochrome c-552/4 ambt_00100 f9a9a19b45d97578d053cf870dd89adf 318 Gene3D G3DSA:3.40.50.170 2 207 8.0E-87 T 13-10-2018 ambt_00100 f9a9a19b45d97578d053cf870dd89adf 318 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 309 5.3E-108 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ambt_00100 f9a9a19b45d97578d053cf870dd89adf 318 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 306 37.992 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ambt_00100 f9a9a19b45d97578d053cf870dd89adf 318 Pfam PF02911 Formyl transferase, C-terminal domain 205 302 1.1E-29 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ambt_00100 f9a9a19b45d97578d053cf870dd89adf 318 SUPERFAMILY SSF50486 206 308 3.92E-32 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 ambt_00100 f9a9a19b45d97578d053cf870dd89adf 318 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ambt_00100 f9a9a19b45d97578d053cf870dd89adf 318 Pfam PF00551 Formyl transferase 6 184 4.4E-52 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ambt_00100 f9a9a19b45d97578d053cf870dd89adf 318 SUPERFAMILY SSF53328 5 208 1.1E-68 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ambt_00100 f9a9a19b45d97578d053cf870dd89adf 318 Gene3D G3DSA:3.10.25.10 208 313 2.8E-34 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ambt_03485 affa08498818a3b6a2e2310ad6c85e9c 749 Gene3D G3DSA:1.10.540.10 53 165 1.6E-89 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ambt_03485 affa08498818a3b6a2e2310ad6c85e9c 749 SUPERFAMILY SSF47203 290 436 4.67E-23 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ambt_03485 affa08498818a3b6a2e2310ad6c85e9c 749 Pfam PF09317 Domain of unknown function (DUF1974) 444 726 7.8E-81 T 13-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 ambt_03485 affa08498818a3b6a2e2310ad6c85e9c 749 Gene3D G3DSA:2.40.110.10 166 289 1.6E-89 T 13-10-2018 ambt_03485 affa08498818a3b6a2e2310ad6c85e9c 749 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 72 162 8.0E-12 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ambt_03485 affa08498818a3b6a2e2310ad6c85e9c 749 Gene3D G3DSA:1.20.140.10 290 435 1.6E-89 T 13-10-2018 ambt_03485 affa08498818a3b6a2e2310ad6c85e9c 749 SUPERFAMILY SSF56645 48 285 7.07E-45 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ambt_03485 affa08498818a3b6a2e2310ad6c85e9c 749 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 434 5.3E-13 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ambt_03485 affa08498818a3b6a2e2310ad6c85e9c 749 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 167 267 5.3E-11 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.5E-21 T 13-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 Gene3D G3DSA:1.10.40.30 361 433 3.8E-175 T 13-10-2018 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 Pfam PF00206 Lyase 6 301 3.8E-81 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 Gene3D G3DSA:1.10.275.10 25 230 3.8E-175 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 4.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 4.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 4.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 4.0E-26 T 13-10-2018 IPR000362 Fumarate lyase family ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 3.6E-66 T 13-10-2018 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 3.6E-66 T 13-10-2018 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 3.6E-66 T 13-10-2018 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 3.6E-66 T 13-10-2018 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 3.6E-66 T 13-10-2018 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 3.6E-66 T 13-10-2018 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 Gene3D G3DSA:1.20.200.10 120 448 3.8E-175 T 13-10-2018 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 452 1.2E-188 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 SUPERFAMILY SSF48557 3 449 5.97E-134 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 ambt_16095 eac81c6e6ef6a2a0aa6eea116cdc6f58 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 39.689 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ambt_00880 6451d1bdbd4b82b9eaf404c5014572d0 728 Gene3D G3DSA:3.30.870.10 256 415 2.2E-20 T 13-10-2018 ambt_00880 6451d1bdbd4b82b9eaf404c5014572d0 728 Pfam PF13091 PLD-like domain 267 399 3.6E-13 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ambt_00880 6451d1bdbd4b82b9eaf404c5014572d0 728 SUPERFAMILY SSF56024 260 429 6.06E-23 T 13-10-2018 ambt_00880 6451d1bdbd4b82b9eaf404c5014572d0 728 Pfam PF09335 SNARE associated Golgi protein 558 674 8.8E-19 T 13-10-2018 IPR032816 SNARE associated Golgi protein ambt_00880 6451d1bdbd4b82b9eaf404c5014572d0 728 Pfam PF00614 Phospholipase D Active site motif 132 156 1.6E-5 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ambt_00880 6451d1bdbd4b82b9eaf404c5014572d0 728 Gene3D G3DSA:3.30.870.10 11 226 4.6E-23 T 13-10-2018 ambt_00880 6451d1bdbd4b82b9eaf404c5014572d0 728 SMART SM00155 358 385 3.3E-4 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ambt_00880 6451d1bdbd4b82b9eaf404c5014572d0 728 SMART SM00155 132 159 0.0037 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ambt_00880 6451d1bdbd4b82b9eaf404c5014572d0 728 SUPERFAMILY SSF56024 8 216 2.26E-25 T 13-10-2018 ambt_07925 f00402cd6f2c324105b7457f2b8cd3d7 233 SUPERFAMILY SSF47384 14 78 1.0E-4 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_07925 f00402cd6f2c324105b7457f2b8cd3d7 233 Gene3D G3DSA:1.10.287.130 17 76 1.2E-20 T 13-10-2018 ambt_07925 f00402cd6f2c324105b7457f2b8cd3d7 233 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 127 233 2.7E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_07925 f00402cd6f2c324105b7457f2b8cd3d7 233 PRINTS PR00344 Bacterial sensor protein C-terminal signature 159 173 7.5E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_07925 f00402cd6f2c324105b7457f2b8cd3d7 233 PRINTS PR00344 Bacterial sensor protein C-terminal signature 220 233 7.5E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_07925 f00402cd6f2c324105b7457f2b8cd3d7 233 PRINTS PR00344 Bacterial sensor protein C-terminal signature 190 208 7.5E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_07925 f00402cd6f2c324105b7457f2b8cd3d7 233 Gene3D G3DSA:3.30.565.10 77 233 1.2E-20 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_07925 f00402cd6f2c324105b7457f2b8cd3d7 233 SMART SM00387 124 233 1.3E-5 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_07925 f00402cd6f2c324105b7457f2b8cd3d7 233 SUPERFAMILY SSF55874 69 233 9.82E-21 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_02165 39498eb64f8dacca3f4fc3e9c8fa3ecf 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 9 313 38.219 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ambt_02165 39498eb64f8dacca3f4fc3e9c8fa3ecf 313 SUPERFAMILY SSF81799 117 216 9.29E-34 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 ambt_02165 39498eb64f8dacca3f4fc3e9c8fa3ecf 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 6 312 1.2E-122 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ambt_02165 39498eb64f8dacca3f4fc3e9c8fa3ecf 313 Pfam PF01795 MraW methylase family 6 312 6.4E-115 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ambt_02165 39498eb64f8dacca3f4fc3e9c8fa3ecf 313 Gene3D G3DSA:1.10.150.170 115 217 1.8E-105 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 ambt_02165 39498eb64f8dacca3f4fc3e9c8fa3ecf 313 Gene3D G3DSA:3.40.50.150 12 312 1.8E-105 T 13-10-2018 ambt_02165 39498eb64f8dacca3f4fc3e9c8fa3ecf 313 SUPERFAMILY SSF53335 9 313 1.39E-44 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_02165 39498eb64f8dacca3f4fc3e9c8fa3ecf 313 PIRSF PIRSF004486 3 313 2.0E-104 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ambt_02175 4561d46c7c2cb822ac2c1c9e690dc9f4 591 Pfam PF00905 Penicillin binding protein transpeptidase domain 264 562 1.6E-64 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ambt_02175 4561d46c7c2cb822ac2c1c9e690dc9f4 591 Gene3D G3DSA:3.40.710.10 299 485 7.2E-102 T 13-10-2018 ambt_02175 4561d46c7c2cb822ac2c1c9e690dc9f4 591 SUPERFAMILY SSF56519 67 237 7.85E-43 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ambt_02175 4561d46c7c2cb822ac2c1c9e690dc9f4 591 Gene3D G3DSA:3.90.1310.30 63 237 1.3E-42 T 13-10-2018 ambt_02175 4561d46c7c2cb822ac2c1c9e690dc9f4 591 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 23 578 44.181 T 13-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ambt_02175 4561d46c7c2cb822ac2c1c9e690dc9f4 591 Gene3D G3DSA:3.30.450.330 239 566 7.2E-102 T 13-10-2018 ambt_02175 4561d46c7c2cb822ac2c1c9e690dc9f4 591 Pfam PF03717 Penicillin-binding Protein dimerisation domain 72 222 3.6E-17 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ambt_02175 4561d46c7c2cb822ac2c1c9e690dc9f4 591 SUPERFAMILY SSF56601 239 574 8.95E-87 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 6.2E-38 T 13-10-2018 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 6.2E-38 T 13-10-2018 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 6.2E-38 T 13-10-2018 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 6.2E-38 T 13-10-2018 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 218 237 6.2E-38 T 13-10-2018 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 SUPERFAMILY SSF52833 2 102 3.24E-21 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 SUPERFAMILY SSF51905 217 513 4.77E-50 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 Gene3D G3DSA:3.50.50.60 217 507 8.2E-103 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 2 516 1.3E-227 T 13-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 SUPERFAMILY SSF52833 106 196 1.01E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 279 5.3E-61 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 249 264 5.3E-61 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 5.3E-61 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 5.3E-61 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 5.3E-61 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 217 239 5.3E-61 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 5.3E-61 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 5.3E-61 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 5.3E-61 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 PIRSF PIRSF000238 1 520 2.9E-209 T 13-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 Gene3D G3DSA:3.40.30.80 1 201 2.1E-57 T 13-10-2018 ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 Gene3D G3DSA:3.50.50.60 326 449 8.2E-103 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 Pfam PF13192 Thioredoxin domain 122 199 6.9E-11 T 13-10-2018 IPR012336 Thioredoxin-like fold ambt_06765 02a7fa1bac29f4af99291dc834fb6337 529 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 217 497 5.6E-44 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ambt_12465 2cfd0b338ae10cfdf4dc5931609ccf19 557 Pfam PF00733 Asparagine synthase 212 366 1.9E-55 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 ambt_12465 2cfd0b338ae10cfdf4dc5931609ccf19 557 SUPERFAMILY SSF52402 207 482 1.01E-73 T 13-10-2018 ambt_12465 2cfd0b338ae10cfdf4dc5931609ccf19 557 PIRSF PIRSF001589 1 368 1.2E-108 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ambt_12465 2cfd0b338ae10cfdf4dc5931609ccf19 557 PIRSF PIRSF001589 363 553 3.9E-26 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ambt_12465 2cfd0b338ae10cfdf4dc5931609ccf19 557 Gene3D G3DSA:3.60.20.10 2 193 1.7E-71 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_12465 2cfd0b338ae10cfdf4dc5931609ccf19 557 Pfam PF13537 Glutamine amidotransferase domain 48 166 1.6E-40 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ambt_12465 2cfd0b338ae10cfdf4dc5931609ccf19 557 Gene3D G3DSA:3.40.50.620 194 516 2.2E-114 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_12465 2cfd0b338ae10cfdf4dc5931609ccf19 557 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 374 4.7E-119 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ambt_12465 2cfd0b338ae10cfdf4dc5931609ccf19 557 SUPERFAMILY SSF56235 1 196 8.58E-59 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_19750 ab6313b0baffedb92cd062016b59b65c 244 PIRSF PIRSF000887 22 241 1.5E-41 T 13-10-2018 IPR024173 Phosphoesterase, MJ0037 ambt_19750 ab6313b0baffedb92cd062016b59b65c 244 Gene3D G3DSA:3.60.21.10 40 200 1.8E-7 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like ambt_19750 ab6313b0baffedb92cd062016b59b65c 244 SUPERFAMILY SSF56300 43 187 1.44E-12 T 13-10-2018 ambt_19750 ab6313b0baffedb92cd062016b59b65c 244 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 22 242 6.4E-57 T 13-10-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated ambt_19825 cd6c1870e4d743db76d4de439a02299d 546 Gene3D G3DSA:3.40.50.970 335 538 8.4E-53 T 13-10-2018 ambt_19825 cd6c1870e4d743db76d4de439a02299d 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 378 524 5.6E-37 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ambt_19825 cd6c1870e4d743db76d4de439a02299d 546 SUPERFAMILY SSF52518 1 176 4.04E-50 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_19825 cd6c1870e4d743db76d4de439a02299d 546 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 415 434 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 ambt_19825 cd6c1870e4d743db76d4de439a02299d 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 2.6E-55 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ambt_19825 cd6c1870e4d743db76d4de439a02299d 546 Gene3D G3DSA:3.40.50.970 1 177 1.9E-62 T 13-10-2018 ambt_19825 cd6c1870e4d743db76d4de439a02299d 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 318 6.3E-29 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ambt_19825 cd6c1870e4d743db76d4de439a02299d 546 SUPERFAMILY SSF52518 355 533 3.93E-57 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_19825 cd6c1870e4d743db76d4de439a02299d 546 Gene3D G3DSA:3.40.50.1220 180 327 2.6E-33 T 13-10-2018 ambt_19825 cd6c1870e4d743db76d4de439a02299d 546 SUPERFAMILY SSF52467 153 348 2.18E-37 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ambt_07785 52a8f85cde685872ffbbf355a7220cfb 291 SUPERFAMILY SSF55620 154 289 5.23E-24 T 13-10-2018 ambt_07785 52a8f85cde685872ffbbf355a7220cfb 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 152 281 9.0E-6 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 ambt_07785 52a8f85cde685872ffbbf355a7220cfb 291 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 24 139 9.1E-9 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 ambt_07785 52a8f85cde685872ffbbf355a7220cfb 291 SUPERFAMILY SSF55620 1 156 6.67E-30 T 13-10-2018 ambt_07785 52a8f85cde685872ffbbf355a7220cfb 291 Gene3D G3DSA:3.30.479.10 152 290 1.6E-7 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 ambt_07785 52a8f85cde685872ffbbf355a7220cfb 291 Gene3D G3DSA:3.30.479.10 13 151 2.7E-22 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 ambt_18700 9c166ff466bb857cf855252606435019 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 9.5E-53 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ambt_18700 9c166ff466bb857cf855252606435019 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 9.5E-53 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ambt_18700 9c166ff466bb857cf855252606435019 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 9.5E-53 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ambt_18700 9c166ff466bb857cf855252606435019 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 9.5E-53 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ambt_18700 9c166ff466bb857cf855252606435019 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 9.5E-53 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ambt_18700 9c166ff466bb857cf855252606435019 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 6.4E-21 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ambt_18700 9c166ff466bb857cf855252606435019 162 Gene3D G3DSA:3.40.50.620 1 162 7.9E-57 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_18700 9c166ff466bb857cf855252606435019 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 1.6E-57 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ambt_18700 9c166ff466bb857cf855252606435019 162 SUPERFAMILY SSF52374 4 156 8.04E-45 T 13-10-2018 ambt_18700 9c166ff466bb857cf855252606435019 162 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 69 8.0E-4 T 13-10-2018 ambt_18700 9c166ff466bb857cf855252606435019 162 Pfam PF01467 Cytidylyltransferase-like 6 134 6.0E-24 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ambt_18700 9c166ff466bb857cf855252606435019 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.541 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 Gene3D G3DSA:1.10.287.130 285 372 3.2E-26 T 13-10-2018 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 SUPERFAMILY SSF47384 294 375 1.96E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 Gene3D G3DSA:3.30.565.10 373 540 1.2E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 SMART SM00387 421 539 1.8E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 SUPERFAMILY SSF52172 563 686 3.27E-35 T 13-10-2018 IPR011006 CheY-like superfamily ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 Pfam PF00072 Response regulator receiver domain 566 678 5.0E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 Gene3D G3DSA:3.40.50.12740 563 694 6.4E-40 T 13-10-2018 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 SUPERFAMILY SSF55781 19 162 1.35E-14 T 13-10-2018 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 Pfam PF00512 His Kinase A (phospho-acceptor) domain 309 374 2.5E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 SMART SM00388 309 374 3.4E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 2.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 490 2.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 515 2.7E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 Gene3D G3DSA:3.30.450.20 167 284 1.7E-17 T 13-10-2018 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 535 1.9E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 SUPERFAMILY SSF55874 363 533 4.85E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 Gene3D G3DSA:3.30.450.40 8 166 2.2E-11 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 SMART SM00448 564 680 1.0E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 Pfam PF08447 PAS fold 198 282 3.5E-6 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 SMART SM00065 17 163 0.0038 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 SUPERFAMILY SSF55785 179 289 9.07E-13 T 13-10-2018 IPR035965 PAS domain superfamily ambt_19125 fab1b7e98ea27d43bacadb495cc524fc 695 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 170 295 1.1E-9 T 13-10-2018 IPR000014 PAS domain ambt_13640 5c1a42b55f48359f80fd533c8ea0c51a 191 Hamap MF_00052_B Ribonuclease HII [rnhB]. 4 183 36.153 T 13-10-2018 IPR022898 Ribonuclease HII GO:0004523 ambt_13640 5c1a42b55f48359f80fd533c8ea0c51a 191 Gene3D G3DSA:3.30.420.10 1 191 1.5E-71 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_13640 5c1a42b55f48359f80fd533c8ea0c51a 191 Pfam PF01351 Ribonuclease HII 6 181 6.1E-38 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain ambt_13640 5c1a42b55f48359f80fd533c8ea0c51a 191 SUPERFAMILY SSF53098 4 189 1.27E-66 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_17450 a4e826603c78e030c423d7adbf79fe68 266 Pfam PF02265 S1/P1 Nuclease 28 264 2.5E-67 T 13-10-2018 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 ambt_17450 a4e826603c78e030c423d7adbf79fe68 266 SUPERFAMILY SSF48537 28 262 4.06E-59 T 13-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 ambt_17450 a4e826603c78e030c423d7adbf79fe68 266 Gene3D G3DSA:1.10.575.10 28 266 1.1E-65 T 13-10-2018 IPR008947 Phospholipase C/P1 nuclease domain superfamily GO:0016788 ambt_09990 38062c6b16d0391f786820546e67d854 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 292 7.0E-113 T 13-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ambt_09990 38062c6b16d0391f786820546e67d854 309 Gene3D G3DSA:3.40.366.10 7 285 9.9E-100 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 ambt_09990 38062c6b16d0391f786820546e67d854 309 SUPERFAMILY SSF52151 4 307 4.71E-79 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ambt_09990 38062c6b16d0391f786820546e67d854 309 Pfam PF00698 Acyl transferase domain 7 292 6.8E-36 T 13-10-2018 IPR014043 Acyl transferase ambt_09990 38062c6b16d0391f786820546e67d854 309 Gene3D G3DSA:3.30.70.250 124 198 9.9E-100 T 13-10-2018 ambt_09990 38062c6b16d0391f786820546e67d854 309 PIRSF PIRSF000446 1 309 1.5E-120 T 13-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ambt_09990 38062c6b16d0391f786820546e67d854 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 309 7.3E-39 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain ambt_09990 38062c6b16d0391f786820546e67d854 309 SUPERFAMILY SSF55048 128 198 8.76E-15 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding ambt_12790 93c323818a8e263dbdb2acdfc939be3b 402 Pfam PF06155 Protein of unknown function (DUF971) 20 84 3.3E-6 T 13-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 ambt_12790 93c323818a8e263dbdb2acdfc939be3b 402 Gene3D G3DSA:3.30.2020.30 2 92 2.6E-8 T 13-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 ambt_12790 93c323818a8e263dbdb2acdfc939be3b 402 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 132 351 1.6E-42 T 13-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 ambt_12790 93c323818a8e263dbdb2acdfc939be3b 402 Gene3D G3DSA:3.60.130.10 98 370 1.3E-70 T 13-10-2018 ambt_12790 93c323818a8e263dbdb2acdfc939be3b 402 SUPERFAMILY SSF51197 100 368 1.69E-58 T 13-10-2018 ambt_18380 7739f44f84038dac178432802f3f4a9f 309 SUPERFAMILY SSF46785 12 97 3.66E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_18380 7739f44f84038dac178432802f3f4a9f 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 4.6E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_18380 7739f44f84038dac178432802f3f4a9f 309 Gene3D G3DSA:1.10.10.10 12 98 5.1E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_18380 7739f44f84038dac178432802f3f4a9f 309 Pfam PF03466 LysR substrate binding domain 122 300 1.1E-20 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_18380 7739f44f84038dac178432802f3f4a9f 309 SUPERFAMILY SSF53850 119 300 5.63E-24 T 13-10-2018 ambt_18380 7739f44f84038dac178432802f3f4a9f 309 Gene3D G3DSA:3.40.190.290 118 306 1.8E-14 T 13-10-2018 ambt_09320 db1d8f0941d0e3dc6ee458b28e408c20 336 Pfam PF00174 Oxidoreductase molybdopterin binding domain 109 270 2.1E-33 T 13-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 ambt_09320 db1d8f0941d0e3dc6ee458b28e408c20 336 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 9 336 53.889 T 13-10-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 ambt_09320 db1d8f0941d0e3dc6ee458b28e408c20 336 Gene3D G3DSA:3.90.420.10 67 336 4.2E-116 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 ambt_09320 db1d8f0941d0e3dc6ee458b28e408c20 336 SUPERFAMILY SSF56524 80 325 5.89E-93 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 Gene3D G3DSA:3.20.19.10 620 858 5.0E-80 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 Gene3D G3DSA:1.10.1440.20 562 619 1.3E-8 T 13-10-2018 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 5.9E-144 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 Pfam PF00694 Aconitase C-terminal domain 657 787 3.7E-28 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 Gene3D G3DSA:3.30.499.10 358 561 1.4E-76 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 SUPERFAMILY SSF53732 23 587 5.89E-184 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 SUPERFAMILY SSF52016 599 857 1.86E-65 T 13-10-2018 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 Gene3D G3DSA:3.30.499.20 12 357 1.6E-128 T 13-10-2018 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 PRINTS PR00415 Aconitase family signature 191 204 9.5E-27 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 PRINTS PR00415 Aconitase family signature 402 413 9.5E-27 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 PRINTS PR00415 Aconitase family signature 162 170 9.5E-27 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 PRINTS PR00415 Aconitase family signature 360 374 9.5E-27 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 PRINTS PR00415 Aconitase family signature 464 477 9.5E-27 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 PRINTS PR00415 Aconitase family signature 267 280 9.5E-27 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 PRINTS PR00415 Aconitase family signature 138 151 9.5E-27 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 PRINTS PR00415 Aconitase family signature 281 294 9.5E-27 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 PRINTS PR00415 Aconitase family signature 205 220 9.5E-27 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_01720 226bd72ecdcaadb9bb123566f3f24b7c 865 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 13-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 ambt_20005 91c25a22edbc6ec4d502fea9dd8826c2 501 Gene3D G3DSA:3.30.565.10 351 500 1.1E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_20005 91c25a22edbc6ec4d502fea9dd8826c2 501 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 500 6.7E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_20005 91c25a22edbc6ec4d502fea9dd8826c2 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 3.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20005 91c25a22edbc6ec4d502fea9dd8826c2 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 480 3.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20005 91c25a22edbc6ec4d502fea9dd8826c2 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 499 3.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20005 91c25a22edbc6ec4d502fea9dd8826c2 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 3.6E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20005 91c25a22edbc6ec4d502fea9dd8826c2 501 SMART SM00387 394 501 2.5E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_20005 91c25a22edbc6ec4d502fea9dd8826c2 501 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 348 1.9E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_20005 91c25a22edbc6ec4d502fea9dd8826c2 501 SUPERFAMILY SSF47384 248 281 9.81E-5 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_20005 91c25a22edbc6ec4d502fea9dd8826c2 501 SUPERFAMILY SSF55874 355 500 6.02E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_19445 96af96aa10c3832a05272595060eba91 530 Pfam PF02881 SRP54-type protein, helical bundle domain 234 299 1.8E-11 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_19445 96af96aa10c3832a05272595060eba91 530 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 497 510 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_19445 96af96aa10c3832a05272595060eba91 530 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 247 523 2.3E-113 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ambt_19445 96af96aa10c3832a05272595060eba91 530 Gene3D G3DSA:3.40.50.300 316 512 1.1E-115 T 13-10-2018 ambt_19445 96af96aa10c3832a05272595060eba91 530 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 246 524 63.039 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ambt_19445 96af96aa10c3832a05272595060eba91 530 Gene3D G3DSA:1.20.120.140 220 522 1.1E-115 T 13-10-2018 ambt_19445 96af96aa10c3832a05272595060eba91 530 SMART SM00382 322 523 8.6E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_19445 96af96aa10c3832a05272595060eba91 530 Pfam PF00448 SRP54-type protein, GTPase domain 323 523 1.9E-77 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_19445 96af96aa10c3832a05272595060eba91 530 SMART SM00963 223 303 1.6E-22 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_19445 96af96aa10c3832a05272595060eba91 530 SMART SM00962 323 524 8.3E-124 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_19445 96af96aa10c3832a05272595060eba91 530 SUPERFAMILY SSF47364 218 296 7.33E-21 T 13-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 ambt_19445 96af96aa10c3832a05272595060eba91 530 SUPERFAMILY SSF52540 321 524 2.94E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02925 47e394efeb241d0afdb7b5f17d62c36b 1085 SUPERFAMILY SSF50939 453 745 1.28E-35 T 13-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 ambt_02925 47e394efeb241d0afdb7b5f17d62c36b 1085 SUPERFAMILY SSF110296 83 352 1.49E-60 T 13-10-2018 ambt_02925 47e394efeb241d0afdb7b5f17d62c36b 1085 Gene3D G3DSA:2.130.10.10 27 197 1.1E-35 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_02925 47e394efeb241d0afdb7b5f17d62c36b 1085 Gene3D G3DSA:2.130.10.10 494 722 2.0E-30 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_02925 47e394efeb241d0afdb7b5f17d62c36b 1085 SUPERFAMILY SSF50939 321 425 2.26E-6 T 13-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 ambt_02925 47e394efeb241d0afdb7b5f17d62c36b 1085 Gene3D G3DSA:2.130.10.10 313 440 8.3E-11 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_02925 47e394efeb241d0afdb7b5f17d62c36b 1085 Gene3D G3DSA:2.130.10.10 198 312 4.6E-21 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_02925 47e394efeb241d0afdb7b5f17d62c36b 1085 Pfam PF15902 Sortilin, neurotensin receptor 3, 130 256 8.5E-12 T 13-10-2018 IPR031778 Sortilin, N-terminal ambt_02925 47e394efeb241d0afdb7b5f17d62c36b 1085 Pfam PF15902 Sortilin, neurotensin receptor 3, 290 395 1.3E-10 T 13-10-2018 IPR031778 Sortilin, N-terminal ambt_20730 e14169ad87c87b5ac2ed51f798a13ad3 295 Gene3D G3DSA:3.90.226.10 31 266 4.2E-14 T 13-10-2018 ambt_20730 e14169ad87c87b5ac2ed51f798a13ad3 295 SUPERFAMILY SSF52096 29 247 4.08E-10 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_20730 e14169ad87c87b5ac2ed51f798a13ad3 295 Pfam PF01972 Serine dehydrogenase proteinase 64 131 3.2E-9 T 13-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 ambt_00550 01964c5caa858e5cf9efbc0c6b0f5783 735 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 124 445 3.9E-98 T 13-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ambt_00550 01964c5caa858e5cf9efbc0c6b0f5783 735 Pfam PF00326 Prolyl oligopeptidase family 537 732 3.2E-55 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ambt_00550 01964c5caa858e5cf9efbc0c6b0f5783 735 Gene3D G3DSA:2.140.10.30 21 476 6.6E-164 T 13-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily ambt_00550 01964c5caa858e5cf9efbc0c6b0f5783 735 Gene3D G3DSA:3.40.50.1820 486 731 2.7E-77 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_00550 01964c5caa858e5cf9efbc0c6b0f5783 735 SUPERFAMILY SSF82171 20 466 1.16E-65 T 13-10-2018 ambt_00550 01964c5caa858e5cf9efbc0c6b0f5783 735 SUPERFAMILY SSF53474 481 731 1.01E-76 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_00245 07014054989e3c013c02d6f06bfe9454 297 PRINTS PR00067 Catalase signature 73 100 2.9E-23 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00245 07014054989e3c013c02d6f06bfe9454 297 PRINTS PR00067 Catalase signature 105 131 2.9E-23 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00245 07014054989e3c013c02d6f06bfe9454 297 Gene3D G3DSA:2.40.180.10 1 276 2.8E-90 T 13-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ambt_00245 07014054989e3c013c02d6f06bfe9454 297 Pfam PF00199 Catalase 5 171 4.6E-60 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00245 07014054989e3c013c02d6f06bfe9454 297 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 118 126 - T 13-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00245 07014054989e3c013c02d6f06bfe9454 297 SMART SM01060 1 176 7.0E-14 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00245 07014054989e3c013c02d6f06bfe9454 297 SUPERFAMILY SSF56634 5 271 2.09E-76 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_00245 07014054989e3c013c02d6f06bfe9454 297 Pfam PF06628 Catalase-related immune-responsive 200 258 3.3E-15 T 13-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_06580 85dce46aae7a2e7ccff64c189d9a0f7c 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ambt_06580 85dce46aae7a2e7ccff64c189d9a0f7c 393 Pfam PF00108 Thiolase, N-terminal domain 5 262 5.0E-65 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ambt_06580 85dce46aae7a2e7ccff64c189d9a0f7c 393 Pfam PF02803 Thiolase, C-terminal domain 271 391 3.9E-43 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ambt_06580 85dce46aae7a2e7ccff64c189d9a0f7c 393 SUPERFAMILY SSF53901 1 265 6.18E-70 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_06580 85dce46aae7a2e7ccff64c189d9a0f7c 393 PIRSF PIRSF000429 1 393 3.5E-117 T 13-10-2018 IPR002155 Thiolase GO:0016747 ambt_06580 85dce46aae7a2e7ccff64c189d9a0f7c 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.8E-127 T 13-10-2018 IPR002155 Thiolase GO:0016747 ambt_06580 85dce46aae7a2e7ccff64c189d9a0f7c 393 SUPERFAMILY SSF53901 272 392 9.87E-42 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_06580 85dce46aae7a2e7ccff64c189d9a0f7c 393 Gene3D G3DSA:3.40.47.10 128 389 5.5E-136 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_06580 85dce46aae7a2e7ccff64c189d9a0f7c 393 Gene3D G3DSA:3.40.47.10 5 276 5.5E-136 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_14975 41c57438facfef4c154e0b5f10a54106 164 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 8 131 4.8E-23 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ambt_14975 41c57438facfef4c154e0b5f10a54106 164 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 7 131 1.5E-23 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ambt_14975 41c57438facfef4c154e0b5f10a54106 164 SUPERFAMILY SSF55083 4 154 5.89E-40 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ambt_14975 41c57438facfef4c154e0b5f10a54106 164 Gene3D G3DSA:3.30.70.560 4 157 4.0E-32 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ambt_01990 1a93eb72d24c85eca538f0a68e5bcf98 212 Gene3D G3DSA:3.40.30.10 4 196 1.6E-44 T 13-10-2018 ambt_01990 1a93eb72d24c85eca538f0a68e5bcf98 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 107 193 4.5E-7 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_01990 1a93eb72d24c85eca538f0a68e5bcf98 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 7.6E-15 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_01990 1a93eb72d24c85eca538f0a68e5bcf98 212 SUPERFAMILY SSF47616 82 200 2.92E-18 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_01990 1a93eb72d24c85eca538f0a68e5bcf98 212 Gene3D G3DSA:1.20.1050.10 82 193 1.6E-44 T 13-10-2018 ambt_01990 1a93eb72d24c85eca538f0a68e5bcf98 212 SUPERFAMILY SSF52833 1 83 5.61E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 SMART SM00267 958 1130 8.4E-54 T 13-10-2018 IPR000160 GGDEF domain ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 Gene3D G3DSA:2.130.10.10 484 678 1.1E-24 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 Gene3D G3DSA:2.130.10.10 28 308 1.4E-30 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 SUPERFAMILY SSF63829 376 673 1.07E-12 T 13-10-2018 ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 Pfam PF00990 Diguanylate cyclase, GGDEF domain 969 1122 7.4E-46 T 13-10-2018 IPR000160 GGDEF domain ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 Gene3D G3DSA:3.30.450.20 840 967 8.4E-13 T 13-10-2018 ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 Gene3D G3DSA:2.60.40.10 682 807 2.7E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 Gene3D G3DSA:2.130.10.10 313 479 1.1E-17 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 SUPERFAMILY SSF55073 974 1131 1.41E-44 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 Gene3D G3DSA:3.20.20.450 1143 1390 3.1E-73 T 13-10-2018 IPR035919 EAL domain superfamily ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 Gene3D G3DSA:3.30.70.270 968 1142 1.5E-56 T 13-10-2018 ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 Pfam PF13426 PAS domain 854 957 1.8E-6 T 13-10-2018 IPR000014 PAS domain ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 967 1122 2.1E-39 T 13-10-2018 IPR000160 GGDEF domain ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 Pfam PF00563 EAL domain 1148 1379 1.4E-53 T 13-10-2018 IPR001633 EAL domain ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 SMART SM00052 1140 1384 3.9E-73 T 13-10-2018 IPR001633 EAL domain ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 SUPERFAMILY SSF55785 852 965 1.71E-10 T 13-10-2018 IPR035965 PAS domain superfamily ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 SUPERFAMILY SSF141868 1145 1391 4.45E-73 T 13-10-2018 IPR035919 EAL domain superfamily ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 SUPERFAMILY SSF63829 39 206 3.71E-11 T 13-10-2018 ambt_06040 e035f0a795131bdcdd3664be89f7406a 1393 Pfam PF07494 Two component regulator propeller 39 62 0.004 T 13-10-2018 IPR011110 Two component regulator propeller ambt_06910 24b179b656b077fb7d84cd427d3d133f 561 Pfam PF03929 PepSY-associated TM region 3 399 1.3E-56 T 13-10-2018 IPR005625 PepSY-associated TM protein ambt_07805 809c16410c8548cd9f32e1c6be735e46 227 Gene3D G3DSA:2.40.10.220 128 224 6.0E-8 T 13-10-2018 ambt_07805 809c16410c8548cd9f32e1c6be735e46 227 SUPERFAMILY SSF141371 131 225 2.94E-11 T 13-10-2018 ambt_07805 809c16410c8548cd9f32e1c6be735e46 227 Pfam PF07238 PilZ domain 121 222 4.2E-10 T 13-10-2018 IPR009875 PilZ domain GO:0035438 ambt_07805 809c16410c8548cd9f32e1c6be735e46 227 Gene3D G3DSA:2.30.110.10 9 121 1.2E-15 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ambt_07805 809c16410c8548cd9f32e1c6be735e46 227 SUPERFAMILY SSF141371 13 121 4.12E-23 T 13-10-2018 ambt_07805 809c16410c8548cd9f32e1c6be735e46 227 Pfam PF12945 Flagellar protein YcgR 23 112 6.9E-12 T 13-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal ambt_08395 f23a61c400dc4d1d428734938b2df37f 368 SMART SM00245 148 341 8.8E-18 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ambt_08395 f23a61c400dc4d1d428734938b2df37f 368 Gene3D G3DSA:3.30.750.44 82 316 1.5E-66 T 13-10-2018 ambt_08395 f23a61c400dc4d1d428734938b2df37f 368 SUPERFAMILY SSF52096 143 355 4.8E-41 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_08395 f23a61c400dc4d1d428734938b2df37f 368 Gene3D G3DSA:3.90.226.10 142 349 1.5E-66 T 13-10-2018 ambt_08395 f23a61c400dc4d1d428734938b2df37f 368 Pfam PF03572 Peptidase family S41 171 339 1.5E-29 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ambt_20210 75e4e8b5f8a125b61c042a46017904c3 697 Gene3D G3DSA:2.40.170.20 144 697 2.1E-52 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_20210 75e4e8b5f8a125b61c042a46017904c3 697 Pfam PF00593 TonB dependent receptor 202 696 6.1E-28 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_20210 75e4e8b5f8a125b61c042a46017904c3 697 SUPERFAMILY SSF56935 28 697 2.44E-62 T 13-10-2018 ambt_17480 4e42830ac3337b1df2bd2a66e0d064d9 276 Gene3D G3DSA:3.10.310.10 117 263 4.5E-104 T 13-10-2018 ambt_17480 4e42830ac3337b1df2bd2a66e0d064d9 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 13-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ambt_17480 4e42830ac3337b1df2bd2a66e0d064d9 276 Gene3D G3DSA:3.10.310.10 5 272 4.5E-104 T 13-10-2018 ambt_17480 4e42830ac3337b1df2bd2a66e0d064d9 276 Pfam PF01678 Diaminopimelate epimerase 154 268 2.7E-29 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ambt_17480 4e42830ac3337b1df2bd2a66e0d064d9 276 Pfam PF01678 Diaminopimelate epimerase 5 125 8.3E-36 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ambt_17480 4e42830ac3337b1df2bd2a66e0d064d9 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 7.4E-99 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ambt_17480 4e42830ac3337b1df2bd2a66e0d064d9 276 SUPERFAMILY SSF54506 3 276 4.48E-54 T 13-10-2018 ambt_17480 4e42830ac3337b1df2bd2a66e0d064d9 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.222 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ambt_17240 d9362df0504eeaeee39117890a906892 182 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 48 161 1.5E-8 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ambt_17240 d9362df0504eeaeee39117890a906892 182 Gene3D G3DSA:3.40.50.1240 1 179 4.7E-13 T 13-10-2018 IPR029033 Histidine phosphatase superfamily ambt_17240 d9362df0504eeaeee39117890a906892 182 SUPERFAMILY SSF53254 2 169 6.0E-16 T 13-10-2018 IPR029033 Histidine phosphatase superfamily ambt_08545 4e2d9bca8221e88d9390df031be8ec56 376 Gene3D G3DSA:1.10.620.20 2 340 3.8E-142 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 ambt_08545 4e2d9bca8221e88d9390df031be8ec56 376 Pfam PF00268 Ribonucleotide reductase, small chain 33 332 8.3E-49 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08545 4e2d9bca8221e88d9390df031be8ec56 376 SUPERFAMILY SSF47240 3 341 2.54E-111 T 13-10-2018 IPR009078 Ferritin-like superfamily ambt_05685 2afa0ce6787eb65c05bb9193573530b8 217 Gene3D G3DSA:1.10.357.10 74 215 8.1E-29 T 13-10-2018 ambt_05685 2afa0ce6787eb65c05bb9193573530b8 217 SUPERFAMILY SSF46689 24 93 1.3E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_05685 2afa0ce6787eb65c05bb9193573530b8 217 Gene3D G3DSA:1.10.10.60 19 69 3.2E-16 T 13-10-2018 ambt_05685 2afa0ce6787eb65c05bb9193573530b8 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 2.8E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_05685 2afa0ce6787eb65c05bb9193573530b8 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 2.8E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_05685 2afa0ce6787eb65c05bb9193573530b8 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 71 2.2E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_05685 2afa0ce6787eb65c05bb9193573530b8 217 SUPERFAMILY SSF48498 91 206 7.12E-7 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ambt_15160 74b7aa3bac8132a7c5fc89d6fd1bbb59 299 SUPERFAMILY SSF53790 42 283 3.14E-69 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ambt_15160 74b7aa3bac8132a7c5fc89d6fd1bbb59 299 Gene3D G3DSA:3.40.1010.10 35 160 9.9E-40 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ambt_15160 74b7aa3bac8132a7c5fc89d6fd1bbb59 299 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 50 64 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ambt_15160 74b7aa3bac8132a7c5fc89d6fd1bbb59 299 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 45 282 1.7E-80 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ambt_15160 74b7aa3bac8132a7c5fc89d6fd1bbb59 299 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 46 257 4.6E-50 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ambt_15160 74b7aa3bac8132a7c5fc89d6fd1bbb59 299 Gene3D G3DSA:3.30.950.10 161 290 8.1E-39 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ambt_12065 473a2d6d0c5c789a4db1c64ed1075bbd 126 SUPERFAMILY SSF52833 44 124 4.69E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_12065 473a2d6d0c5c789a4db1c64ed1075bbd 126 Pfam PF13417 Glutathione S-transferase, N-terminal domain 47 124 4.5E-10 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_12065 473a2d6d0c5c789a4db1c64ed1075bbd 126 Gene3D G3DSA:3.40.30.10 30 125 8.0E-13 T 13-10-2018 ambt_07670 425dddc1c0ffa57381dbd396372829e2 349 SMART SM00354 7 80 1.3E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_07670 425dddc1c0ffa57381dbd396372829e2 349 Gene3D G3DSA:3.40.50.2300 172 342 1.0E-59 T 13-10-2018 ambt_07670 425dddc1c0ffa57381dbd396372829e2 349 SUPERFAMILY SSF47413 7 65 3.38E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_07670 425dddc1c0ffa57381dbd396372829e2 349 SUPERFAMILY SSF53822 64 331 4.12E-51 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_07670 425dddc1c0ffa57381dbd396372829e2 349 Pfam PF13377 Periplasmic binding protein-like domain 181 345 3.0E-35 T 13-10-2018 ambt_07670 425dddc1c0ffa57381dbd396372829e2 349 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 52 7.2E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_07670 425dddc1c0ffa57381dbd396372829e2 349 Gene3D G3DSA:3.40.50.2300 84 337 1.0E-59 T 13-10-2018 ambt_07670 425dddc1c0ffa57381dbd396372829e2 349 Gene3D G3DSA:1.10.260.40 3 65 3.8E-21 T 13-10-2018 ambt_14015 27288c08c1f728fa58ba060bbe1b9eb4 203 Pfam PF00694 Aconitase C-terminal domain 6 128 9.9E-34 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ambt_14015 27288c08c1f728fa58ba060bbe1b9eb4 203 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 7 192 2.0E-78 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 ambt_14015 27288c08c1f728fa58ba060bbe1b9eb4 203 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 5 203 41.409 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 ambt_14015 27288c08c1f728fa58ba060bbe1b9eb4 203 SUPERFAMILY SSF52016 5 197 1.02E-55 T 13-10-2018 ambt_14015 27288c08c1f728fa58ba060bbe1b9eb4 203 Gene3D G3DSA:3.20.19.10 2 184 7.7E-74 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ambt_06780 b403af6768886d453c7872d52f143b09 504 Pfam PF03929 PepSY-associated TM region 11 353 3.3E-54 T 13-10-2018 IPR005625 PepSY-associated TM protein ambt_02640 aa1306663c6465ad0e50943964530bbf 285 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 13-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 ambt_02640 aa1306663c6465ad0e50943964530bbf 285 Pfam PF01163 RIO1 family 31 220 2.6E-39 T 13-10-2018 ambt_02640 aa1306663c6465ad0e50943964530bbf 285 Gene3D G3DSA:1.10.510.10 137 224 6.1E-19 T 13-10-2018 ambt_02640 aa1306663c6465ad0e50943964530bbf 285 SUPERFAMILY SSF56112 18 214 3.53E-20 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_02640 aa1306663c6465ad0e50943964530bbf 285 SMART SM00090 5 235 1.2E-9 T 13-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 ambt_10005 42d9d401d3937638d6aa4de1a3a5c52f 56 SUPERFAMILY SSF57829 2 54 8.55E-19 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 ambt_10005 42d9d401d3937638d6aa4de1a3a5c52f 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 18.042 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10005 42d9d401d3937638d6aa4de1a3a5c52f 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 9.9E-21 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10005 42d9d401d3937638d6aa4de1a3a5c52f 56 Pfam PF01783 Ribosomal L32p protein family 2 54 1.3E-20 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_14030 27ac2bb2a9b618c72a8d2549c6069a18 303 SMART SM00382 42 196 2.7E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_14030 27ac2bb2a9b618c72a8d2549c6069a18 303 SUPERFAMILY SSF52540 6 254 4.32E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14030 27ac2bb2a9b618c72a8d2549c6069a18 303 Gene3D G3DSA:3.40.50.300 28 186 2.7E-16 T 13-10-2018 ambt_14030 27ac2bb2a9b618c72a8d2549c6069a18 303 Pfam PF13401 AAA domain 42 172 6.2E-23 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_03720 c6be2582d0910bd7752c5299260b36c0 314 Gene3D G3DSA:1.10.10.10 1 87 6.5E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_03720 c6be2582d0910bd7752c5299260b36c0 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.4E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_03720 c6be2582d0910bd7752c5299260b36c0 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.4E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_03720 c6be2582d0910bd7752c5299260b36c0 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.4E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_03720 c6be2582d0910bd7752c5299260b36c0 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 9.8E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_03720 c6be2582d0910bd7752c5299260b36c0 314 Pfam PF03466 LysR substrate binding domain 96 304 1.7E-15 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_03720 c6be2582d0910bd7752c5299260b36c0 314 SUPERFAMILY SSF46785 2 83 8.47E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_03720 c6be2582d0910bd7752c5299260b36c0 314 Gene3D G3DSA:3.40.190.10 90 304 4.9E-58 T 13-10-2018 ambt_03720 c6be2582d0910bd7752c5299260b36c0 314 SUPERFAMILY SSF53850 90 307 3.8E-36 T 13-10-2018 ambt_03720 c6be2582d0910bd7752c5299260b36c0 314 Gene3D G3DSA:3.40.190.10 170 279 4.9E-58 T 13-10-2018 ambt_01080 77d8a018c38c382840c967c23cc2b9ef 243 SUPERFAMILY SSF46785 3 73 9.35E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_01080 77d8a018c38c382840c967c23cc2b9ef 243 SMART SM00895 86 208 6.4E-20 T 13-10-2018 IPR011711 GntR, C-terminal ambt_01080 77d8a018c38c382840c967c23cc2b9ef 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 2.9E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_01080 77d8a018c38c382840c967c23cc2b9ef 243 SUPERFAMILY SSF48008 84 216 7.85E-21 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_01080 77d8a018c38c382840c967c23cc2b9ef 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.8E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_01080 77d8a018c38c382840c967c23cc2b9ef 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.8E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_01080 77d8a018c38c382840c967c23cc2b9ef 243 Gene3D G3DSA:1.10.10.10 2 73 1.0E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_01080 77d8a018c38c382840c967c23cc2b9ef 243 Gene3D G3DSA:1.20.120.530 81 224 9.4E-22 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_01080 77d8a018c38c382840c967c23cc2b9ef 243 Pfam PF07729 FCD domain 86 207 5.6E-21 T 13-10-2018 IPR011711 GntR, C-terminal ambt_01080 77d8a018c38c382840c967c23cc2b9ef 243 SMART SM00345 10 69 4.8E-23 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_09835 29e625ff685c4972509f6fe4c280f280 372 Pfam PF08787 Alginate lyase 50 366 1.1E-73 T 13-10-2018 IPR014895 Alginate lyase 2 ambt_09835 29e625ff685c4972509f6fe4c280f280 372 SUPERFAMILY SSF49899 50 365 2.93E-41 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ambt_09835 29e625ff685c4972509f6fe4c280f280 372 Gene3D G3DSA:2.60.120.1610 49 372 2.2E-86 T 13-10-2018 ambt_04225 6925f79e878a7f7f19defb2baca764bb 161 SUPERFAMILY SSF54534 3 139 2.75E-36 T 13-10-2018 ambt_04225 6925f79e878a7f7f19defb2baca764bb 161 Gene3D G3DSA:3.10.50.40 3 152 4.4E-53 T 13-10-2018 ambt_04225 6925f79e878a7f7f19defb2baca764bb 161 Gene3D G3DSA:2.40.10.330 71 120 4.4E-53 T 13-10-2018 ambt_04225 6925f79e878a7f7f19defb2baca764bb 161 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 135 4.5E-15 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ambt_00125 a873f3a4566d29b542896a05a74c746d 183 Gene3D G3DSA:3.30.65.10 63 109 9.7E-8 T 13-10-2018 ambt_00125 a873f3a4566d29b542896a05a74c746d 183 SUPERFAMILY SSF57783 67 108 5.1E-13 T 13-10-2018 ambt_00125 a873f3a4566d29b542896a05a74c746d 183 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 111 147 1.2E-11 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 ambt_00125 a873f3a4566d29b542896a05a74c746d 183 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 21 57 1.4E-13 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 ambt_00125 a873f3a4566d29b542896a05a74c746d 183 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 69 105 1.0E-16 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 ambt_00125 a873f3a4566d29b542896a05a74c746d 183 SUPERFAMILY SSF57783 22 59 7.14E-10 T 13-10-2018 ambt_09645 1f7f4e9d2df1b35180b114257b2727e6 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 7.6E-39 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ambt_09645 1f7f4e9d2df1b35180b114257b2727e6 72 SMART SM00316 4 72 2.7E-6 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_09645 1f7f4e9d2df1b35180b114257b2727e6 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.258 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ambt_09645 1f7f4e9d2df1b35180b114257b2727e6 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.2E-28 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 ambt_09645 1f7f4e9d2df1b35180b114257b2727e6 72 SUPERFAMILY SSF50249 1 70 3.18E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_09645 1f7f4e9d2df1b35180b114257b2727e6 72 Gene3D G3DSA:2.40.50.140 1 72 1.2E-37 T 13-10-2018 ambt_21245 631ff8a41a7a48052814b39d0d06ae44 427 SUPERFAMILY SSF47384 217 287 2.55E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_21245 631ff8a41a7a48052814b39d0d06ae44 427 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 285 1.2E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_21245 631ff8a41a7a48052814b39d0d06ae44 427 Gene3D G3DSA:1.10.287.130 169 286 1.9E-11 T 13-10-2018 ambt_21245 631ff8a41a7a48052814b39d0d06ae44 427 SMART SM00388 224 293 2.2E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_21245 631ff8a41a7a48052814b39d0d06ae44 427 Gene3D G3DSA:3.30.565.10 289 420 1.4E-6 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_21245 631ff8a41a7a48052814b39d0d06ae44 427 SUPERFAMILY SSF55874 298 415 6.48E-11 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_06690 7b7a3be3497069a03d3201379f165227 868 Gene3D G3DSA:2.40.30.10 540 658 4.4E-39 T 13-10-2018 ambt_06690 7b7a3be3497069a03d3201379f165227 868 Pfam PF00009 Elongation factor Tu GTP binding domain 372 528 1.6E-34 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_06690 7b7a3be3497069a03d3201379f165227 868 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 866 17.225 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ambt_06690 7b7a3be3497069a03d3201379f165227 868 Gene3D G3DSA:3.40.50.10050 663 769 2.9E-36 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ambt_06690 7b7a3be3497069a03d3201379f165227 868 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 286 867 1.3E-268 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ambt_06690 7b7a3be3497069a03d3201379f165227 868 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 371 527 6.4E-34 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_06690 7b7a3be3497069a03d3201379f165227 868 SUPERFAMILY SSF50447 542 623 3.53E-22 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_06690 7b7a3be3497069a03d3201379f165227 868 Gene3D G3DSA:2.40.30.10 770 867 9.3E-34 T 13-10-2018 ambt_06690 7b7a3be3497069a03d3201379f165227 868 SUPERFAMILY SSF52156 646 775 1.23E-36 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ambt_06690 7b7a3be3497069a03d3201379f165227 868 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 293 343 7.4E-16 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal ambt_06690 7b7a3be3497069a03d3201379f165227 868 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 8.7E-7 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal ambt_06690 7b7a3be3497069a03d3201379f165227 868 Pfam PF11987 Translation-initiation factor 2 653 758 1.5E-35 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 ambt_06690 7b7a3be3497069a03d3201379f165227 868 SUPERFAMILY SSF50447 770 866 4.71E-33 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_06690 7b7a3be3497069a03d3201379f165227 868 Gene3D G3DSA:3.40.50.300 366 539 1.7E-70 T 13-10-2018 ambt_06690 7b7a3be3497069a03d3201379f165227 868 ProSitePatterns PS01176 Initiation factor 2 signature. 819 841 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ambt_06690 7b7a3be3497069a03d3201379f165227 868 SUPERFAMILY SSF52540 367 533 1.31E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_06690 7b7a3be3497069a03d3201379f165227 868 Gene3D G3DSA:3.30.56.50 2 50 3.6E-19 T 13-10-2018 ambt_06690 7b7a3be3497069a03d3201379f165227 868 SUPERFAMILY SSF46955 3 49 3.66E-10 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily ambt_06690 7b7a3be3497069a03d3201379f165227 868 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 59 93 2.3E-10 T 13-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial ambt_10750 737a26865ce4a88c3c58f1c42ee43b1b 411 Pfam PF00266 Aminotransferase class-V 39 207 1.6E-24 T 13-10-2018 IPR000192 Aminotransferase class V domain ambt_10750 737a26865ce4a88c3c58f1c42ee43b1b 411 Gene3D G3DSA:3.90.1150.10 12 381 1.5E-132 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_10750 737a26865ce4a88c3c58f1c42ee43b1b 411 SUPERFAMILY SSF53383 4 389 4.87E-88 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_10750 737a26865ce4a88c3c58f1c42ee43b1b 411 Gene3D G3DSA:3.40.640.10 23 284 1.5E-132 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_10750 737a26865ce4a88c3c58f1c42ee43b1b 411 PIRSF PIRSF000524 6 410 8.5E-103 T 13-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 ambt_19495 00eea918a9c46a42c2063b0012944e6b 438 Gene3D G3DSA:1.10.3090.10 167 415 2.3E-93 T 13-10-2018 ambt_19495 00eea918a9c46a42c2063b0012944e6b 438 SUPERFAMILY SSF81301 5 165 2.07E-37 T 13-10-2018 ambt_19495 00eea918a9c46a42c2063b0012944e6b 438 Pfam PF12626 Polymerase A arginine-rich C-terminus 312 430 5.4E-41 T 13-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain ambt_19495 00eea918a9c46a42c2063b0012944e6b 438 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 196 256 1.6E-21 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ambt_19495 00eea918a9c46a42c2063b0012944e6b 438 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 1 432 36.394 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 ambt_19495 00eea918a9c46a42c2063b0012944e6b 438 SUPERFAMILY SSF81891 167 402 7.46E-49 T 13-10-2018 ambt_19495 00eea918a9c46a42c2063b0012944e6b 438 Pfam PF01743 Poly A polymerase head domain 32 168 3.1E-36 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ambt_19495 00eea918a9c46a42c2063b0012944e6b 438 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 2 432 2.0E-158 T 13-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 ambt_19495 00eea918a9c46a42c2063b0012944e6b 438 Gene3D G3DSA:3.30.460.10 1 164 4.1E-58 T 13-10-2018 ambt_04355 0684e415d7fa1e3897edf94a7fa0d90c 404 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 42 393 2.5E-122 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 ambt_04355 0684e415d7fa1e3897edf94a7fa0d90c 404 PIRSF PIRSF006769 33 400 8.2E-121 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 ambt_04355 0684e415d7fa1e3897edf94a7fa0d90c 404 SUPERFAMILY SSF53597 180 393 9.99E-54 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ambt_04355 0684e415d7fa1e3897edf94a7fa0d90c 404 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 86 124 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ambt_04355 0684e415d7fa1e3897edf94a7fa0d90c 404 Pfam PF01872 RibD C-terminal domain 183 393 3.0E-50 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ambt_04355 0684e415d7fa1e3897edf94a7fa0d90c 404 Gene3D G3DSA:3.40.430.10 172 401 1.1E-63 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ambt_04355 0684e415d7fa1e3897edf94a7fa0d90c 404 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 38 136 2.1E-21 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ambt_04355 0684e415d7fa1e3897edf94a7fa0d90c 404 Gene3D G3DSA:3.40.140.10 30 171 4.3E-46 T 13-10-2018 ambt_04355 0684e415d7fa1e3897edf94a7fa0d90c 404 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 182 395 2.1E-57 T 13-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 ambt_04355 0684e415d7fa1e3897edf94a7fa0d90c 404 SUPERFAMILY SSF53927 38 178 6.82E-46 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ambt_14175 df01691712e8292d400704d9263af54a 1042 SUPERFAMILY SSF56935 112 989 1.1E-55 T 13-10-2018 ambt_14175 df01691712e8292d400704d9263af54a 1042 SUPERFAMILY SSF49464 35 130 5.49E-7 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ambt_14175 df01691712e8292d400704d9263af54a 1042 Pfam PF13620 Carboxypeptidase regulatory-like domain 35 115 1.3E-12 T 13-10-2018 ambt_14175 df01691712e8292d400704d9263af54a 1042 Gene3D G3DSA:2.40.170.20 345 668 1.5E-18 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_14175 df01691712e8292d400704d9263af54a 1042 Gene3D G3DSA:2.170.130.10 112 243 1.0E-5 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_11830 b38ab0327d7c9bedff3aa4bfa8e507ed 457 Pfam PF00155 Aminotransferase class I and II 39 449 6.5E-48 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ambt_11830 b38ab0327d7c9bedff3aa4bfa8e507ed 457 SUPERFAMILY SSF53383 2 449 2.13E-94 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_11830 b38ab0327d7c9bedff3aa4bfa8e507ed 457 Gene3D G3DSA:3.40.640.10 56 313 5.0E-88 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_11830 b38ab0327d7c9bedff3aa4bfa8e507ed 457 Gene3D G3DSA:3.90.1150.10 42 335 5.0E-88 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_11830 b38ab0327d7c9bedff3aa4bfa8e507ed 457 Gene3D G3DSA:3.90.1150.10 345 451 3.0E-27 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_11830 b38ab0327d7c9bedff3aa4bfa8e507ed 457 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 262 271 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ambt_08370 bb02983de6af118fa4e83c593fcdd47e 140 Gene3D G3DSA:1.10.10.10 2 140 9.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_08370 bb02983de6af118fa4e83c593fcdd47e 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 4.7E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_08370 bb02983de6af118fa4e83c593fcdd47e 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 4.7E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_08370 bb02983de6af118fa4e83c593fcdd47e 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 4.7E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_08370 bb02983de6af118fa4e83c593fcdd47e 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 4.7E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_08370 bb02983de6af118fa4e83c593fcdd47e 140 SMART SM00347 28 130 3.0E-4 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_08370 bb02983de6af118fa4e83c593fcdd47e 140 Pfam PF12802 MarR family 34 89 8.5E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_08370 bb02983de6af118fa4e83c593fcdd47e 140 SUPERFAMILY SSF46785 16 139 5.75E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 Gene3D G3DSA:1.25.40.10 262 406 6.4E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 Gene3D G3DSA:1.25.40.10 18 260 2.1E-37 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 SMART SM00028 141 174 32.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 SMART SM00028 209 242 11.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 SMART SM00028 175 208 2.8 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 SMART SM00028 107 140 28.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 SMART SM00028 73 106 49.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 SMART SM00028 39 72 170.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 Pfam PF13432 Tetratricopeptide repeat 45 105 0.01 T 13-10-2018 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 Pfam PF13432 Tetratricopeptide repeat 111 173 3.3E-5 T 13-10-2018 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 Gene3D G3DSA:2.60.120.620 416 599 1.2E-18 T 13-10-2018 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 Pfam PF13759 Putative 2OG-Fe(II) oxygenase 503 595 4.3E-19 T 13-10-2018 IPR012668 Conserved hypothetical protein CHP02466 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 Pfam PF13374 Tetratricopeptide repeat 177 204 0.0015 T 13-10-2018 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 SUPERFAMILY SSF48452 283 403 1.9E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12945 b8c2720a448088b5ddabdf2417310e32 600 SUPERFAMILY SSF48452 45 307 1.97E-31 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_19320 25f3bd1f8c0b1280212da2ebe4443c19 736 Pfam PF00664 ABC transporter transmembrane region 180 443 3.6E-33 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ambt_19320 25f3bd1f8c0b1280212da2ebe4443c19 736 SMART SM00382 537 715 9.6E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_19320 25f3bd1f8c0b1280212da2ebe4443c19 736 Gene3D G3DSA:1.20.1560.10 162 476 1.6E-59 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_19320 25f3bd1f8c0b1280212da2ebe4443c19 736 ProSitePatterns PS00211 ABC transporters family signature. 643 657 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_19320 25f3bd1f8c0b1280212da2ebe4443c19 736 Gene3D G3DSA:3.90.70.10 12 154 1.4E-39 T 13-10-2018 ambt_19320 25f3bd1f8c0b1280212da2ebe4443c19 736 Pfam PF03412 Peptidase C39 family 21 149 1.2E-34 T 13-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 ambt_19320 25f3bd1f8c0b1280212da2ebe4443c19 736 SUPERFAMILY SSF90123 163 470 5.76E-53 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_19320 25f3bd1f8c0b1280212da2ebe4443c19 736 Gene3D G3DSA:3.40.50.300 489 732 6.5E-61 T 13-10-2018 ambt_19320 25f3bd1f8c0b1280212da2ebe4443c19 736 Pfam PF00005 ABC transporter 529 670 7.9E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_19320 25f3bd1f8c0b1280212da2ebe4443c19 736 SUPERFAMILY SSF52540 509 718 2.76E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 49 74 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 126 150 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 403 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 371 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 280 301 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 413 432 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 341 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 218 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 229 248 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 463 484 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 168 180 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 99 122 1.3E-95 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 59 506 3.7E-131 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 4 649 0.0 T 13-10-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 SUPERFAMILY SSF81442 45 560 6.93E-172 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 Gene3D G3DSA:1.20.210.10 20 565 2.0E-182 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_02905 032a84bd24dc0e390b88b111808b3bc9 662 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 282 336 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_14920 a14720605eac006a3467e4b7cdd7309c 320 Pfam PF12849 PBP superfamily domain 35 294 9.9E-30 T 13-10-2018 IPR024370 PBP domain ambt_14920 a14720605eac006a3467e4b7cdd7309c 320 SUPERFAMILY SSF53850 37 315 1.58E-62 T 13-10-2018 ambt_14920 a14720605eac006a3467e4b7cdd7309c 320 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 12 306 2.6E-66 T 13-10-2018 IPR011862 Phosphate binding protein GO:0042301 ambt_14920 a14720605eac006a3467e4b7cdd7309c 320 Gene3D G3DSA:3.40.190.10 123 265 2.8E-93 T 13-10-2018 ambt_14920 a14720605eac006a3467e4b7cdd7309c 320 Gene3D G3DSA:3.40.190.10 38 308 2.8E-93 T 13-10-2018 ambt_19295 93c44058751adc8421aeb41656a400a1 747 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 29 75 9.1E-11 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_19295 93c44058751adc8421aeb41656a400a1 747 SUPERFAMILY SSF53706 28 508 5.37E-120 T 13-10-2018 ambt_19295 93c44058751adc8421aeb41656a400a1 747 Pfam PF01568 Molydopterin dinucleotide binding domain 622 738 1.0E-20 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ambt_19295 93c44058751adc8421aeb41656a400a1 747 Gene3D G3DSA:3.40.228.10 159 357 1.6E-96 T 13-10-2018 ambt_19295 93c44058751adc8421aeb41656a400a1 747 SMART SM00926 27 81 3.3E-14 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_19295 93c44058751adc8421aeb41656a400a1 747 SUPERFAMILY SSF50692 617 746 4.75E-29 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ambt_19295 93c44058751adc8421aeb41656a400a1 747 Gene3D G3DSA:3.40.50.740 91 506 1.6E-96 T 13-10-2018 ambt_19295 93c44058751adc8421aeb41656a400a1 747 Gene3D G3DSA:2.20.25.90 23 86 1.2E-16 T 13-10-2018 ambt_19295 93c44058751adc8421aeb41656a400a1 747 Gene3D G3DSA:2.40.40.20 606 747 8.4E-26 T 13-10-2018 ambt_19295 93c44058751adc8421aeb41656a400a1 747 Pfam PF00384 Molybdopterin oxidoreductase 84 504 3.9E-40 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 Gene3D G3DSA:3.40.50.150 482 699 2.7E-77 T 13-10-2018 ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 Pfam PF01170 Putative RNA methylase family UPF0020 163 372 2.4E-49 T 13-10-2018 IPR000241 Putative RNA methylase domain ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 SMART SM00981 57 155 1.2E-16 T 13-10-2018 IPR004114 THUMP domain GO:0003723 ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 PIRSF PIRSF037618 1 700 5.4E-285 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 473 655 2.1E-24 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 Gene3D G3DSA:3.30.750.80 390 481 2.5E-34 T 13-10-2018 ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 Pfam PF02926 THUMP domain 38 154 3.6E-11 T 13-10-2018 IPR004114 THUMP domain GO:0003723 ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 699 30.938 T 13-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 Gene3D G3DSA:3.30.2130.30 6 254 9.8E-123 T 13-10-2018 ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 SUPERFAMILY SSF53335 393 694 1.44E-74 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 Gene3D G3DSA:3.40.50.150 170 369 9.8E-123 T 13-10-2018 ambt_08080 7e25f451a5f7c1035f817a5842f31f20 713 SUPERFAMILY SSF53335 142 374 2.39E-37 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_13510 2f57d6844db110c13da82567bed5b2cb 143 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 138 2.5E-31 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 ambt_13510 2f57d6844db110c13da82567bed5b2cb 143 PIRSF PIRSF002889 1 141 3.0E-35 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 ambt_13510 2f57d6844db110c13da82567bed5b2cb 143 Pfam PF00460 Flagella basal body rod protein 11 39 1.2E-8 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ambt_02140 18c1e1f03bb35db01696cb5dc3c8d0ca 484 Gene3D G3DSA:1.10.287.470 164 196 3.3E-10 T 13-10-2018 ambt_02140 18c1e1f03bb35db01696cb5dc3c8d0ca 484 Gene3D G3DSA:2.40.30.170 115 128 3.3E-10 T 13-10-2018 ambt_02140 18c1e1f03bb35db01696cb5dc3c8d0ca 484 Gene3D G3DSA:2.40.420.20 327 428 4.3E-18 T 13-10-2018 ambt_02140 18c1e1f03bb35db01696cb5dc3c8d0ca 484 Gene3D G3DSA:2.40.30.170 230 326 3.6E-28 T 13-10-2018 ambt_02140 18c1e1f03bb35db01696cb5dc3c8d0ca 484 SUPERFAMILY SSF111369 129 324 3.27E-20 T 13-10-2018 ambt_02140 18c1e1f03bb35db01696cb5dc3c8d0ca 484 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 112 320 3.4E-78 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_02140 18c1e1f03bb35db01696cb5dc3c8d0ca 484 Gene3D G3DSA:2.40.420.20 103 114 3.3E-10 T 13-10-2018 ambt_02140 18c1e1f03bb35db01696cb5dc3c8d0ca 484 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 199 399 2.1E-32 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_02140 18c1e1f03bb35db01696cb5dc3c8d0ca 484 Gene3D G3DSA:2.40.50.100 129 163 3.3E-10 T 13-10-2018 ambt_12375 67cf02251e3627519389ee4e5e89cd32 190 Pfam PF14316 Domain of unknown function (DUF4381) 14 158 3.8E-38 T 13-10-2018 IPR025489 Protein of unknown function (DUF4381 ambt_09135 7875bc3c80ed34886e0965d9d0fa096d 250 SMART SM00893 23 211 3.1E-66 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ambt_09135 7875bc3c80ed34886e0965d9d0fa096d 250 Pfam PF01012 Electron transfer flavoprotein domain 31 206 2.0E-45 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ambt_09135 7875bc3c80ed34886e0965d9d0fa096d 250 Gene3D G3DSA:3.40.50.620 1 248 3.0E-87 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_09135 7875bc3c80ed34886e0965d9d0fa096d 250 PIRSF PIRSF000090 1 249 3.0E-84 T 13-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 ambt_09135 7875bc3c80ed34886e0965d9d0fa096d 250 SUPERFAMILY SSF52402 1 242 2.16E-84 T 13-10-2018 ambt_09135 7875bc3c80ed34886e0965d9d0fa096d 250 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 13-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 Gene3D G3DSA:1.10.390.60 221 459 1.9E-75 T 13-10-2018 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 198 213 6.3E-26 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 329 341 6.3E-26 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 310 325 6.3E-26 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 151 166 6.3E-26 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 275 285 6.3E-26 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 SUPERFAMILY SSF55486 224 465 4.54E-68 T 13-10-2018 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 SUPERFAMILY SSF63737 21 215 1.7E-43 T 13-10-2018 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 Pfam PF01433 Peptidase family M1 domain 226 454 2.9E-65 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 Pfam PF11838 ERAP1-like C-terminal domain 524 815 3.6E-28 T 13-10-2018 IPR024571 ERAP1-like C-terminal domain ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 Gene3D G3DSA:1.25.50.20 541 856 7.6E-23 T 13-10-2018 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 Gene3D G3DSA:2.60.40.1910 460 538 5.7E-9 T 13-10-2018 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 Gene3D G3DSA:2.60.40.1730 16 216 4.6E-48 T 13-10-2018 ambt_05700 cbf17a06d487ee11a273f7ab8bd0d829 856 SUPERFAMILY SSF48371 544 661 8.28E-5 T 13-10-2018 IPR016024 Armadillo-type fold ambt_18405 313bd1190be23631ba17d488894e985e 203 Pfam PF01983 Guanylyl transferase CofC like 5 193 2.2E-22 T 13-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 ambt_18405 313bd1190be23631ba17d488894e985e 203 TIGRFAM TIGR03552 F420_cofC: 2-phospho-L-lactate guanylyltransferase 6 197 4.8E-42 T 13-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 ambt_18405 313bd1190be23631ba17d488894e985e 203 SUPERFAMILY SSF53448 4 195 5.28E-30 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18405 313bd1190be23631ba17d488894e985e 203 Gene3D G3DSA:3.90.550.10 2 180 3.9E-32 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_11150 b5d0e5ec1d7026057fa9c3008306210b 524 SUPERFAMILY SSF109604 334 508 4.08E-29 T 13-10-2018 ambt_11150 b5d0e5ec1d7026057fa9c3008306210b 524 Pfam PF11849 Domain of unknown function (DUF3369) 144 319 2.2E-45 T 13-10-2018 IPR021800 Domain of unknown function DUF3369 ambt_11150 b5d0e5ec1d7026057fa9c3008306210b 524 Gene3D G3DSA:3.40.50.2300 22 164 8.8E-14 T 13-10-2018 ambt_11150 b5d0e5ec1d7026057fa9c3008306210b 524 Gene3D G3DSA:1.10.3210.10 319 520 6.7E-57 T 13-10-2018 ambt_11150 b5d0e5ec1d7026057fa9c3008306210b 524 Pfam PF00072 Response regulator receiver domain 24 134 1.1E-6 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_11150 b5d0e5ec1d7026057fa9c3008306210b 524 SUPERFAMILY SSF52172 18 152 2.85E-12 T 13-10-2018 IPR011006 CheY-like superfamily ambt_11150 b5d0e5ec1d7026057fa9c3008306210b 524 Pfam PF01966 HD domain 346 467 5.2E-16 T 13-10-2018 IPR006674 HD domain ambt_14600 2fcf3fd4f29b715bd3faefebb4bb859e 241 Pfam PF00005 ABC transporter 20 166 2.8E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_14600 2fcf3fd4f29b715bd3faefebb4bb859e 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 4.6E-122 T 13-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 ambt_14600 2fcf3fd4f29b715bd3faefebb4bb859e 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 7.9E-7 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ambt_14600 2fcf3fd4f29b715bd3faefebb4bb859e 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_14600 2fcf3fd4f29b715bd3faefebb4bb859e 241 SUPERFAMILY SSF52540 4 237 8.11E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14600 2fcf3fd4f29b715bd3faefebb4bb859e 241 SMART SM00382 28 214 5.7E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_14600 2fcf3fd4f29b715bd3faefebb4bb859e 241 Gene3D G3DSA:3.40.50.300 2 241 1.8E-70 T 13-10-2018 ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 SMART SM01383 42 118 3.4E-46 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 5 273 5.5E-132 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 SMART SM01382 124 252 1.6E-94 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 Gene3D G3DSA:4.10.950.10 196 274 1.5E-36 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.505 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 Gene3D G3DSA:2.40.50.140 1 114 3.1E-49 T 13-10-2018 ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 Gene3D G3DSA:2.30.30.30 115 195 7.9E-34 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 SUPERFAMILY SSF50104 127 272 2.17E-62 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 13-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 4.5E-34 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 PIRSF PIRSF002158 11 274 2.4E-103 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 SUPERFAMILY SSF50249 4 125 6.85E-49 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_16525 8b4f130154eca8ac1fc48ce71e2112fe 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 1.4E-57 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ambt_05040 cf137e0b10d41029598b1e20401c51f9 251 Gene3D G3DSA:3.40.225.10 3 251 6.5E-71 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ambt_05040 cf137e0b10d41029598b1e20401c51f9 251 SUPERFAMILY SSF53639 10 219 4.32E-59 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ambt_05040 cf137e0b10d41029598b1e20401c51f9 251 SMART SM01007 18 198 8.5E-62 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal ambt_05040 cf137e0b10d41029598b1e20401c51f9 251 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 19 198 5.2E-44 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal ambt_17355 7b8f356858c7458167f851aeceaa6662 195 Gene3D G3DSA:2.40.50.140 2 121 1.8E-49 T 13-10-2018 ambt_17355 7b8f356858c7458167f851aeceaa6662 195 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 4 195 3.0E-59 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ambt_17355 7b8f356858c7458167f851aeceaa6662 195 Hamap MF_00984 Single-stranded DNA-binding protein. 6 113 38.732 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ambt_17355 7b8f356858c7458167f851aeceaa6662 195 Pfam PF00436 Single-strand binding protein family 6 109 1.3E-43 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ambt_17355 7b8f356858c7458167f851aeceaa6662 195 SUPERFAMILY SSF50249 5 195 7.88E-58 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_02825 25bb7a309016c87a1866a8a5ae4de5b7 169 Gene3D G3DSA:1.10.10.10 14 156 4.0E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_02825 25bb7a309016c87a1866a8a5ae4de5b7 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 2.0E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_02825 25bb7a309016c87a1866a8a5ae4de5b7 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 2.0E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_02825 25bb7a309016c87a1866a8a5ae4de5b7 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 2.0E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_02825 25bb7a309016c87a1866a8a5ae4de5b7 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 2.0E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_02825 25bb7a309016c87a1866a8a5ae4de5b7 169 Pfam PF01047 MarR family 39 97 1.5E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_02825 25bb7a309016c87a1866a8a5ae4de5b7 169 SMART SM00347 32 133 1.5E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_02825 25bb7a309016c87a1866a8a5ae4de5b7 169 SUPERFAMILY SSF46785 10 151 1.57E-28 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_02825 25bb7a309016c87a1866a8a5ae4de5b7 169 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 106 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site ambt_16670 765b65ba50e483b6d8975610f4bb3871 167 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 9 161 5.3E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_16670 765b65ba50e483b6d8975610f4bb3871 167 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 9 166 2.5E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_16670 765b65ba50e483b6d8975610f4bb3871 167 Gene3D G3DSA:3.40.50.1000 7 166 7.0E-50 T 13-10-2018 IPR023214 HAD superfamily ambt_16670 765b65ba50e483b6d8975610f4bb3871 167 Gene3D G3DSA:1.10.260.80 19 70 7.0E-50 T 13-10-2018 ambt_16670 765b65ba50e483b6d8975610f4bb3871 167 SUPERFAMILY SSF56784 4 167 1.42E-27 T 13-10-2018 IPR036412 HAD-like superfamily ambt_16670 765b65ba50e483b6d8975610f4bb3871 167 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 166 2.2E-17 T 13-10-2018 ambt_18715 d0aad27aca5e198764971da3eefe7da7 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_18715 d0aad27aca5e198764971da3eefe7da7 51 Pfam PF00471 Ribosomal protein L33 4 49 6.8E-18 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_18715 d0aad27aca5e198764971da3eefe7da7 51 SUPERFAMILY SSF57829 1 49 5.01E-19 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 ambt_18715 d0aad27aca5e198764971da3eefe7da7 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 1.4E-23 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_18715 d0aad27aca5e198764971da3eefe7da7 51 Gene3D G3DSA:2.20.28.120 1 51 2.0E-28 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_18715 d0aad27aca5e198764971da3eefe7da7 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.9 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_14780 4ecac91e4a14cf974c6794bfad00b5d1 283 Pfam PF00226 DnaJ domain 218 279 1.1E-11 T 13-10-2018 IPR001623 DnaJ domain ambt_14780 4ecac91e4a14cf974c6794bfad00b5d1 283 Pfam PF05099 Tellurite resistance protein TerB 55 176 1.3E-14 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal ambt_14780 4ecac91e4a14cf974c6794bfad00b5d1 283 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 37.546 T 13-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 ambt_14780 4ecac91e4a14cf974c6794bfad00b5d1 283 SUPERFAMILY SSF158682 47 183 3.92E-18 T 13-10-2018 IPR029024 TerB-like ambt_14780 4ecac91e4a14cf974c6794bfad00b5d1 283 PRINTS PR00625 DnaJ domain signature 220 238 1.6E-8 T 13-10-2018 IPR001623 DnaJ domain ambt_14780 4ecac91e4a14cf974c6794bfad00b5d1 283 PRINTS PR00625 DnaJ domain signature 262 282 1.6E-8 T 13-10-2018 IPR001623 DnaJ domain ambt_14780 4ecac91e4a14cf974c6794bfad00b5d1 283 PRINTS PR00625 DnaJ domain signature 238 253 1.6E-8 T 13-10-2018 IPR001623 DnaJ domain ambt_14780 4ecac91e4a14cf974c6794bfad00b5d1 283 SUPERFAMILY SSF46565 139 279 4.18E-28 T 13-10-2018 IPR036869 Chaperone J-domain superfamily ambt_14780 4ecac91e4a14cf974c6794bfad00b5d1 283 Gene3D G3DSA:1.10.3680.10 46 194 1.0E-23 T 13-10-2018 IPR029024 TerB-like ambt_14780 4ecac91e4a14cf974c6794bfad00b5d1 283 Gene3D G3DSA:1.10.287.110 195 282 3.5E-16 T 13-10-2018 IPR036869 Chaperone J-domain superfamily ambt_14780 4ecac91e4a14cf974c6794bfad00b5d1 283 SMART SM00271 217 282 4.3E-15 T 13-10-2018 IPR001623 DnaJ domain ambt_08910 47716a0417ec1578a9bf486f95173f88 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 335 2.0E-148 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_08910 47716a0417ec1578a9bf486f95173f88 346 Gene3D G3DSA:3.30.1330.10 7 171 2.9E-66 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ambt_08910 47716a0417ec1578a9bf486f95173f88 346 SUPERFAMILY SSF56042 172 340 4.64E-61 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ambt_08910 47716a0417ec1578a9bf486f95173f88 346 SUPERFAMILY SSF55326 8 171 4.78E-52 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ambt_08910 47716a0417ec1578a9bf486f95173f88 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 344 46.386 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_08910 47716a0417ec1578a9bf486f95173f88 346 Gene3D G3DSA:3.90.650.10 172 345 2.0E-70 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ambt_08910 47716a0417ec1578a9bf486f95173f88 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 165 1.3E-15 T 13-10-2018 IPR016188 PurM-like, N-terminal domain ambt_08910 47716a0417ec1578a9bf486f95173f88 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 339 4.2E-38 T 13-10-2018 IPR010918 PurM-like, C-terminal domain ambt_16030 2eafc2224c9d57aaf0b6c0b41c662f44 154 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 8.6E-65 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ambt_16030 2eafc2224c9d57aaf0b6c0b41c662f44 154 Pfam PF00588 SpoU rRNA Methylase family 2 142 2.8E-34 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ambt_16030 2eafc2224c9d57aaf0b6c0b41c662f44 154 SUPERFAMILY SSF75217 2 152 7.85E-45 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases ambt_16030 2eafc2224c9d57aaf0b6c0b41c662f44 154 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 32.99 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ambt_16030 2eafc2224c9d57aaf0b6c0b41c662f44 154 PIRSF PIRSF029256 1 154 4.8E-67 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ambt_16030 2eafc2224c9d57aaf0b6c0b41c662f44 154 Gene3D G3DSA:3.40.1280.10 1 154 2.3E-67 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ambt_00485 ca74121ce33568cbfb6a31fe0b7a435e 357 Hamap MF_01113 DNA polymerase IV [dinB]. 1 352 36.294 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 ambt_00485 ca74121ce33568cbfb6a31fe0b7a435e 357 SUPERFAMILY SSF100879 241 353 7.38E-23 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ambt_00485 ca74121ce33568cbfb6a31fe0b7a435e 357 Gene3D G3DSA:3.30.70.270 4 164 1.4E-62 T 13-10-2018 ambt_00485 ca74121ce33568cbfb6a31fe0b7a435e 357 Pfam PF11798 IMS family HHH motif 166 197 6.1E-7 T 13-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 ambt_00485 ca74121ce33568cbfb6a31fe0b7a435e 357 Pfam PF00817 impB/mucB/samB family 7 154 2.3E-48 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ambt_00485 ca74121ce33568cbfb6a31fe0b7a435e 357 SUPERFAMILY SSF56672 1 233 4.45E-91 T 13-10-2018 ambt_00485 ca74121ce33568cbfb6a31fe0b7a435e 357 Gene3D G3DSA:1.10.150.20 175 229 1.0E-16 T 13-10-2018 ambt_00485 ca74121ce33568cbfb6a31fe0b7a435e 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 338 1.9E-6 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ambt_00485 ca74121ce33568cbfb6a31fe0b7a435e 357 Gene3D G3DSA:3.30.1490.100 237 354 1.4E-25 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ambt_00485 ca74121ce33568cbfb6a31fe0b7a435e 357 Gene3D G3DSA:2.30.40.20 21 73 1.4E-62 T 13-10-2018 ambt_05160 5ada21cabde5847cdc12d562aeb61928 170 SUPERFAMILY SSF117892 62 126 4.05E-7 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily ambt_05160 5ada21cabde5847cdc12d562aeb61928 170 Gene3D G3DSA:3.30.479.30 71 138 2.4E-6 T 13-10-2018 ambt_05160 5ada21cabde5847cdc12d562aeb61928 170 Pfam PF01145 SPFH domain / Band 7 family 44 120 3.4E-5 T 13-10-2018 IPR001107 Band 7 domain ambt_08375 6f0fe87c151b6a2d0f63363db72ee997 48 Gene3D G3DSA:3.40.50.720 1 45 7.2E-9 T 13-10-2018 ambt_08375 6f0fe87c151b6a2d0f63363db72ee997 48 Pfam PF05368 NmrA-like family 4 36 2.1E-6 T 13-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 ambt_08375 6f0fe87c151b6a2d0f63363db72ee997 48 SUPERFAMILY SSF51735 1 39 8.14E-10 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_10800 01d708ecabb440c7afd388ceae32a411 701 SUPERFAMILY SSF55073 278 435 1.49E-43 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_10800 01d708ecabb440c7afd388ceae32a411 701 Gene3D G3DSA:3.30.450.20 151 260 2.0E-20 T 13-10-2018 ambt_10800 01d708ecabb440c7afd388ceae32a411 701 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 263 3.0E-14 T 13-10-2018 IPR000014 PAS domain ambt_10800 01d708ecabb440c7afd388ceae32a411 701 Pfam PF00563 EAL domain 450 683 8.3E-66 T 13-10-2018 IPR001633 EAL domain ambt_10800 01d708ecabb440c7afd388ceae32a411 701 SUPERFAMILY SSF55785 134 260 5.93E-16 T 13-10-2018 IPR035965 PAS domain superfamily ambt_10800 01d708ecabb440c7afd388ceae32a411 701 SUPERFAMILY SSF52172 5 160 1.41E-33 T 13-10-2018 IPR011006 CheY-like superfamily ambt_10800 01d708ecabb440c7afd388ceae32a411 701 SUPERFAMILY SSF141868 450 695 8.37E-81 T 13-10-2018 IPR035919 EAL domain superfamily ambt_10800 01d708ecabb440c7afd388ceae32a411 701 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 271 430 1.7E-37 T 13-10-2018 IPR000160 GGDEF domain ambt_10800 01d708ecabb440c7afd388ceae32a411 701 Gene3D G3DSA:3.20.20.450 447 700 3.8E-87 T 13-10-2018 IPR035919 EAL domain superfamily ambt_10800 01d708ecabb440c7afd388ceae32a411 701 SMART SM00267 262 433 1.0E-52 T 13-10-2018 IPR000160 GGDEF domain ambt_10800 01d708ecabb440c7afd388ceae32a411 701 Gene3D G3DSA:3.40.50.2300 4 138 3.1E-31 T 13-10-2018 ambt_10800 01d708ecabb440c7afd388ceae32a411 701 SMART SM00091 143 209 1.1E-7 T 13-10-2018 IPR000014 PAS domain ambt_10800 01d708ecabb440c7afd388ceae32a411 701 Pfam PF00989 PAS fold 149 259 8.8E-13 T 13-10-2018 IPR013767 PAS fold GO:0006355 ambt_10800 01d708ecabb440c7afd388ceae32a411 701 Pfam PF00072 Response regulator receiver domain 8 113 4.3E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_10800 01d708ecabb440c7afd388ceae32a411 701 Gene3D G3DSA:3.30.70.270 267 446 8.5E-55 T 13-10-2018 ambt_10800 01d708ecabb440c7afd388ceae32a411 701 SMART SM00052 443 688 2.8E-94 T 13-10-2018 IPR001633 EAL domain ambt_10800 01d708ecabb440c7afd388ceae32a411 701 Pfam PF00990 Diguanylate cyclase, GGDEF domain 273 428 1.1E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_10800 01d708ecabb440c7afd388ceae32a411 701 SMART SM00448 6 118 2.0E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_20675 6b36a69820089ec9b303a04dffb035db 424 Pfam PF13433 Periplasmic binding protein domain 28 396 6.9E-174 T 13-10-2018 ambt_20675 6b36a69820089ec9b303a04dffb035db 424 Gene3D G3DSA:3.40.50.2300 30 364 3.1E-132 T 13-10-2018 ambt_20675 6b36a69820089ec9b303a04dffb035db 424 SUPERFAMILY SSF53822 27 400 1.96E-88 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_20675 6b36a69820089ec9b303a04dffb035db 424 Gene3D G3DSA:3.40.50.2300 143 384 3.1E-132 T 13-10-2018 ambt_20675 6b36a69820089ec9b303a04dffb035db 424 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 28 393 1.5E-173 T 13-10-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like ambt_15565 d15aa83641a9434c477a79c05f203645 716 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 13-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_15565 d15aa83641a9434c477a79c05f203645 716 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 694 9.7E-5 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_15565 d15aa83641a9434c477a79c05f203645 716 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 5.8E-24 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_15565 d15aa83641a9434c477a79c05f203645 716 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 222 3.5E-37 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ambt_15565 d15aa83641a9434c477a79c05f203645 716 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 13-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_15565 d15aa83641a9434c477a79c05f203645 716 Gene3D G3DSA:1.10.1040.50 498 710 1.8E-70 T 13-10-2018 ambt_15565 d15aa83641a9434c477a79c05f203645 716 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 318 495 1.5E-60 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ambt_15565 d15aa83641a9434c477a79c05f203645 716 Gene3D G3DSA:3.90.226.10 1 312 2.4E-92 T 13-10-2018 ambt_15565 d15aa83641a9434c477a79c05f203645 716 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ambt_15565 d15aa83641a9434c477a79c05f203645 716 SUPERFAMILY SSF51735 318 496 3.0E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_15565 d15aa83641a9434c477a79c05f203645 716 Gene3D G3DSA:3.40.50.720 314 497 4.1E-65 T 13-10-2018 ambt_15565 d15aa83641a9434c477a79c05f203645 716 SUPERFAMILY SSF48179 496 608 3.06E-28 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_15565 d15aa83641a9434c477a79c05f203645 716 SUPERFAMILY SSF48179 625 715 7.99E-23 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_15565 d15aa83641a9434c477a79c05f203645 716 SUPERFAMILY SSF52096 2 302 2.82E-67 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_11825 4e7a05ac33fcfcff1dac3b3fffabd48a 299 Pfam PF08241 Methyltransferase domain 91 180 1.2E-22 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ambt_11825 4e7a05ac33fcfcff1dac3b3fffabd48a 299 SUPERFAMILY SSF53335 54 234 5.18E-34 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_11825 4e7a05ac33fcfcff1dac3b3fffabd48a 299 Gene3D G3DSA:3.40.50.150 54 231 2.3E-34 T 13-10-2018 ambt_04295 20afedae11d0ac93d7fddaefad5a87a7 303 Pfam PF01926 50S ribosome-binding GTPase 13 127 1.7E-22 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_04295 20afedae11d0ac93d7fddaefad5a87a7 303 SUPERFAMILY SSF52540 13 208 8.65E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04295 20afedae11d0ac93d7fddaefad5a87a7 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 172 7.8E-35 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_04295 20afedae11d0ac93d7fddaefad5a87a7 303 Pfam PF07650 KH domain 211 287 1.0E-18 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_04295 20afedae11d0ac93d7fddaefad5a87a7 303 Hamap MF_00367 GTPase Era [era]. 8 299 35.881 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_04295 20afedae11d0ac93d7fddaefad5a87a7 303 Gene3D G3DSA:3.30.300.20 188 303 1.7E-42 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta ambt_04295 20afedae11d0ac93d7fddaefad5a87a7 303 Gene3D G3DSA:3.40.50.300 5 186 1.7E-50 T 13-10-2018 ambt_04295 20afedae11d0ac93d7fddaefad5a87a7 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 13 33 5.6E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_04295 20afedae11d0ac93d7fddaefad5a87a7 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 62 77 5.6E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_04295 20afedae11d0ac93d7fddaefad5a87a7 303 SUPERFAMILY SSF54814 184 300 9.81E-43 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ambt_04295 20afedae11d0ac93d7fddaefad5a87a7 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 282 1.3E-102 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_04230 5796080d0a2a5533f4aa7312506e2ebd 337 Gene3D G3DSA:3.30.70.1400 21 112 4.5E-29 T 13-10-2018 ambt_04230 5796080d0a2a5533f4aa7312506e2ebd 337 SUPERFAMILY SSF101790 245 326 3.2E-16 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal ambt_04230 5796080d0a2a5533f4aa7312506e2ebd 337 SUPERFAMILY SSF103025 12 244 1.05E-45 T 13-10-2018 ambt_04230 5796080d0a2a5533f4aa7312506e2ebd 337 Gene3D G3DSA:3.30.70.1630 18 179 4.5E-29 T 13-10-2018 ambt_04230 5796080d0a2a5533f4aa7312506e2ebd 337 Gene3D G3DSA:2.40.30.160 198 316 3.0E-34 T 13-10-2018 ambt_04230 5796080d0a2a5533f4aa7312506e2ebd 337 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 189 252 2.2E-22 T 13-10-2018 IPR017703 YgfZ/GcvT conserved site ambt_04230 5796080d0a2a5533f4aa7312506e2ebd 337 Pfam PF01571 Aminomethyltransferase folate-binding domain 24 119 7.9E-6 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain ambt_20115 ca9b4609ebbda5eb7b090c0a3d32ea13 699 Gene3D G3DSA:3.20.20.80 239 619 4.5E-120 T 13-10-2018 ambt_20115 ca9b4609ebbda5eb7b090c0a3d32ea13 699 Gene3D G3DSA:2.60.40.1180 621 674 4.4E-8 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta ambt_20115 ca9b4609ebbda5eb7b090c0a3d32ea13 699 SUPERFAMILY SSF74650 68 239 2.07E-29 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ambt_20115 ca9b4609ebbda5eb7b090c0a3d32ea13 699 Gene3D G3DSA:2.60.40.1760 36 236 1.7E-22 T 13-10-2018 ambt_20115 ca9b4609ebbda5eb7b090c0a3d32ea13 699 SUPERFAMILY SSF51445 244 587 1.35E-71 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_20115 ca9b4609ebbda5eb7b090c0a3d32ea13 699 SUPERFAMILY SSF51011 589 674 1.01E-13 T 13-10-2018 ambt_20115 ca9b4609ebbda5eb7b090c0a3d32ea13 699 Pfam PF13802 Galactose mutarotase-like 149 208 9.5E-13 T 13-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain ambt_20115 ca9b4609ebbda5eb7b090c0a3d32ea13 699 Pfam PF01055 Glycosyl hydrolases family 31 233 676 7.6E-107 T 13-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 ambt_20050 008dcbd5bbd17e45913ea1b4d48827b6 374 SUPERFAMILY SSF53807 69 327 6.67E-38 T 13-10-2018 ambt_20050 008dcbd5bbd17e45913ea1b4d48827b6 374 Gene3D G3DSA:3.40.50.1980 67 187 2.2E-31 T 13-10-2018 ambt_20050 008dcbd5bbd17e45913ea1b4d48827b6 374 Gene3D G3DSA:3.40.50.1980 193 345 2.7E-23 T 13-10-2018 ambt_20050 008dcbd5bbd17e45913ea1b4d48827b6 374 Pfam PF01497 Periplasmic binding protein 70 300 3.3E-26 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain ambt_20470 e0657cc439743ba2e4d2801ffd894582 252 SMART SM00382 52 241 2.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_20470 e0657cc439743ba2e4d2801ffd894582 252 Gene3D G3DSA:3.40.50.300 24 250 4.7E-56 T 13-10-2018 ambt_20470 e0657cc439743ba2e4d2801ffd894582 252 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_20470 e0657cc439743ba2e4d2801ffd894582 252 Pfam PF00005 ABC transporter 47 193 7.1E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_20470 e0657cc439743ba2e4d2801ffd894582 252 SUPERFAMILY SSF52540 48 231 6.15E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_01335 cbaef58d72cf0a077316795b55c3c4e6 262 SUPERFAMILY SSF53474 10 219 3.84E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_01335 cbaef58d72cf0a077316795b55c3c4e6 262 Pfam PF01764 Lipase (class 3) 60 204 1.7E-22 T 13-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 ambt_01335 cbaef58d72cf0a077316795b55c3c4e6 262 Gene3D G3DSA:3.40.50.1820 2 240 9.8E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_11155 c178900ba0027b8a83ac485e0d516177 288 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 9 284 4.4E-75 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ambt_11155 c178900ba0027b8a83ac485e0d516177 288 Pfam PF13847 Methyltransferase domain 117 246 1.8E-17 T 13-10-2018 IPR025714 Methyltransferase domain ambt_11155 c178900ba0027b8a83ac485e0d516177 288 Gene3D G3DSA:3.40.50.150 85 284 1.4E-57 T 13-10-2018 ambt_11155 c178900ba0027b8a83ac485e0d516177 288 Gene3D G3DSA:1.10.8.10 1 83 1.8E-21 T 13-10-2018 ambt_11155 c178900ba0027b8a83ac485e0d516177 288 SUPERFAMILY SSF53335 4 281 6.07E-54 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_11155 c178900ba0027b8a83ac485e0d516177 288 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 284 41.142 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ambt_11155 c178900ba0027b8a83ac485e0d516177 288 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 280 4.9E-85 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ambt_11155 c178900ba0027b8a83ac485e0d516177 288 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 189 195 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ambt_00540 7f0b11fd7026966013495a7c00bad207 990 SMART SM00052 727 979 3.3E-57 T 13-10-2018 IPR001633 EAL domain ambt_00540 7f0b11fd7026966013495a7c00bad207 990 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 587 714 7.9E-33 T 13-10-2018 IPR000160 GGDEF domain ambt_00540 7f0b11fd7026966013495a7c00bad207 990 SMART SM00267 518 715 2.0E-46 T 13-10-2018 IPR000160 GGDEF domain ambt_00540 7f0b11fd7026966013495a7c00bad207 990 SUPERFAMILY SSF141868 734 986 5.75E-68 T 13-10-2018 IPR035919 EAL domain superfamily ambt_00540 7f0b11fd7026966013495a7c00bad207 990 Pfam PF00563 EAL domain 735 974 4.5E-56 T 13-10-2018 IPR001633 EAL domain ambt_00540 7f0b11fd7026966013495a7c00bad207 990 Gene3D G3DSA:3.20.20.450 718 981 1.3E-75 T 13-10-2018 IPR035919 EAL domain superfamily ambt_00540 7f0b11fd7026966013495a7c00bad207 990 Pfam PF00990 Diguanylate cyclase, GGDEF domain 583 711 1.1E-30 T 13-10-2018 IPR000160 GGDEF domain ambt_00540 7f0b11fd7026966013495a7c00bad207 990 SUPERFAMILY SSF55073 581 716 2.2E-37 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_00540 7f0b11fd7026966013495a7c00bad207 990 Gene3D G3DSA:3.30.450.20 405 516 1.4E-9 T 13-10-2018 ambt_00540 7f0b11fd7026966013495a7c00bad207 990 Gene3D G3DSA:3.30.450.20 279 404 2.0E-5 T 13-10-2018 ambt_00540 7f0b11fd7026966013495a7c00bad207 990 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 402 524 1.8E-8 T 13-10-2018 IPR000014 PAS domain ambt_00540 7f0b11fd7026966013495a7c00bad207 990 SUPERFAMILY SSF55785 390 516 1.26E-11 T 13-10-2018 IPR035965 PAS domain superfamily ambt_00540 7f0b11fd7026966013495a7c00bad207 990 Gene3D G3DSA:3.30.70.270 522 717 4.9E-48 T 13-10-2018 ambt_13080 9a59cc679fbb0b25f03facb05ff271ec 63 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 54 16.65 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ambt_13080 9a59cc679fbb0b25f03facb05ff271ec 63 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 2.5E-29 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ambt_13080 9a59cc679fbb0b25f03facb05ff271ec 63 SUPERFAMILY SSF117130 1 54 7.72E-21 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 ambt_13080 9a59cc679fbb0b25f03facb05ff271ec 63 Gene3D G3DSA:3.30.70.1680 1 59 1.3E-29 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 ambt_13080 9a59cc679fbb0b25f03facb05ff271ec 63 Pfam PF02599 Global regulator protein family 1 52 3.5E-26 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ambt_13080 9a59cc679fbb0b25f03facb05ff271ec 63 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-11 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ambt_22190 f22066ab571818c842da234c38335162 292 SUPERFAMILY SSF110849 40 175 2.72E-37 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily ambt_22190 f22066ab571818c842da234c38335162 292 Gene3D G3DSA:3.90.1530.30 53 116 1.3E-27 T 13-10-2018 ambt_22190 f22066ab571818c842da234c38335162 292 SMART SM00470 40 130 3.0E-37 T 13-10-2018 IPR003115 ParB/Sulfiredoxin ambt_22190 f22066ab571818c842da234c38335162 292 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 211 5.7E-60 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ambt_22190 f22066ab571818c842da234c38335162 292 Gene3D G3DSA:1.10.10.2830 117 230 6.6E-36 T 13-10-2018 ambt_22190 f22066ab571818c842da234c38335162 292 Pfam PF02195 ParB-like nuclease domain 42 130 2.5E-29 T 13-10-2018 IPR003115 ParB/Sulfiredoxin ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 385 404 4.1E-17 T 13-10-2018 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 508 526 4.1E-17 T 13-10-2018 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 629 645 4.1E-17 T 13-10-2018 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 486 4.1E-17 T 13-10-2018 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 13 339 2.1E-87 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 SUPERFAMILY SSF51395 10 370 7.33E-111 T 13-10-2018 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 630 644 9.2E-6 T 13-10-2018 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 384 406 9.2E-6 T 13-10-2018 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 Gene3D G3DSA:3.40.50.720 383 674 4.7E-109 T 13-10-2018 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 SUPERFAMILY SSF51905 478 638 3.89E-20 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 383 651 9.1E-23 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 Gene3D G3DSA:3.20.20.70 10 377 6.5E-125 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 SUPERFAMILY SSF51971 341 527 1.18E-38 T 13-10-2018 ambt_04885 5d9c9f0b4d9a547eb92e2ba68ea51ff6 680 Gene3D G3DSA:3.50.50.60 480 636 4.7E-109 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_13135 53757d032d2a934351f0f32020091941 297 Gene3D G3DSA:3.40.190.10 163 268 5.9E-65 T 13-10-2018 ambt_13135 53757d032d2a934351f0f32020091941 297 Pfam PF03466 LysR substrate binding domain 88 292 2.5E-33 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_13135 53757d032d2a934351f0f32020091941 297 Gene3D G3DSA:3.40.190.10 91 291 5.9E-65 T 13-10-2018 ambt_13135 53757d032d2a934351f0f32020091941 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 7.9E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_13135 53757d032d2a934351f0f32020091941 297 SUPERFAMILY SSF53850 89 295 1.93E-34 T 13-10-2018 ambt_13135 53757d032d2a934351f0f32020091941 297 Gene3D G3DSA:1.10.10.10 1 90 1.8E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_13135 53757d032d2a934351f0f32020091941 297 SUPERFAMILY SSF46785 2 111 2.02E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_00910 aa64e5a17394800b7da6bd5398d11d11 374 Pfam PF00924 Mechanosensitive ion channel 145 352 1.1E-44 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ambt_00910 aa64e5a17394800b7da6bd5398d11d11 374 Gene3D G3DSA:3.30.70.100 256 356 3.0E-17 T 13-10-2018 ambt_00910 aa64e5a17394800b7da6bd5398d11d11 374 Gene3D G3DSA:2.30.30.60 204 253 4.9E-11 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ambt_00910 aa64e5a17394800b7da6bd5398d11d11 374 SUPERFAMILY SSF82861 104 186 3.27E-11 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ambt_00910 aa64e5a17394800b7da6bd5398d11d11 374 SUPERFAMILY SSF50182 188 254 1.73E-14 T 13-10-2018 IPR010920 LSM domain superfamily ambt_00910 aa64e5a17394800b7da6bd5398d11d11 374 SUPERFAMILY SSF82689 257 363 3.01E-22 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ambt_19870 305bfc36f8ced12e103b7646f60f2db1 589 SUPERFAMILY SSF55874 2 203 5.24E-54 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_19870 305bfc36f8ced12e103b7646f60f2db1 589 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 2.5E-13 T 13-10-2018 ambt_19870 305bfc36f8ced12e103b7646f60f2db1 589 SMART SM01340 211 329 6.4E-46 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 ambt_19870 305bfc36f8ced12e103b7646f60f2db1 589 SUPERFAMILY SSF54211 200 329 8.72E-32 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_19870 305bfc36f8ced12e103b7646f60f2db1 589 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 211 328 3.5E-32 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 ambt_19870 305bfc36f8ced12e103b7646f60f2db1 589 SUPERFAMILY SSF118116 430 538 3.01E-5 T 13-10-2018 IPR037198 MutL, C-terminal domain superfamily ambt_19870 305bfc36f8ced12e103b7646f60f2db1 589 Gene3D G3DSA:3.30.565.10 1 210 3.6E-71 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_19870 305bfc36f8ced12e103b7646f60f2db1 589 Gene3D G3DSA:3.30.230.10 216 328 7.1E-33 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_19870 305bfc36f8ced12e103b7646f60f2db1 589 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 571 22.007 T 13-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 ambt_19870 305bfc36f8ced12e103b7646f60f2db1 589 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 13-10-2018 IPR014762 DNA mismatch repair, conserved site ambt_19870 305bfc36f8ced12e103b7646f60f2db1 589 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 2 309 2.8E-96 T 13-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 ambt_20385 927ea167d4bd8363a050ed0d30ff966e 193 Pfam PF01292 Prokaryotic cytochrome b561 22 190 2.1E-28 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ambt_20385 927ea167d4bd8363a050ed0d30ff966e 193 SUPERFAMILY SSF81342 20 190 1.57E-35 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ambt_19645 b946444523a05ff888f17851232d046d 172 Pfam PF00466 Ribosomal protein L10 6 101 2.2E-23 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 ambt_19645 b946444523a05ff888f17851232d046d 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 24.728 T 13-10-2018 IPR022973 Ribosomal protein L10 ambt_19645 b946444523a05ff888f17851232d046d 172 Gene3D G3DSA:3.30.70.1730 6 134 2.2E-28 T 13-10-2018 ambt_19645 b946444523a05ff888f17851232d046d 172 SUPERFAMILY SSF160369 6 171 8.89E-48 T 13-10-2018 ambt_19710 4ca7a02fca0d76c3a00cf07f7f458486 185 SUPERFAMILY SSF82057 117 184 2.01E-20 T 13-10-2018 ambt_19710 4ca7a02fca0d76c3a00cf07f7f458486 185 Pfam PF03831 PhnA domain 120 184 6.6E-22 T 13-10-2018 IPR013988 PhnA protein, C-terminal ambt_19710 4ca7a02fca0d76c3a00cf07f7f458486 185 Gene3D G3DSA:2.30.30.40 116 185 1.6E-24 T 13-10-2018 ambt_19710 4ca7a02fca0d76c3a00cf07f7f458486 185 SMART SM00782 5 51 1.3E-7 T 13-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial ambt_07155 a3a764b36e753f8c823b3c04ddbb3e92 297 SUPERFAMILY SSF48452 36 290 2.77E-64 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_07155 a3a764b36e753f8c823b3c04ddbb3e92 297 SMART SM00028 241 274 56.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_07155 a3a764b36e753f8c823b3c04ddbb3e92 297 SMART SM00028 137 170 58.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_07155 a3a764b36e753f8c823b3c04ddbb3e92 297 SMART SM00028 103 136 0.0045 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_07155 a3a764b36e753f8c823b3c04ddbb3e92 297 SMART SM00028 69 102 5.3 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_07155 a3a764b36e753f8c823b3c04ddbb3e92 297 PIRSF PIRSF004654 1 297 4.3E-103 T 13-10-2018 IPR023605 Lipoprotein NlpI ambt_07155 a3a764b36e753f8c823b3c04ddbb3e92 297 Gene3D G3DSA:1.25.40.10 30 297 1.2E-76 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 Gene3D G3DSA:1.20.58.100 431 544 5.1E-43 T 13-10-2018 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 SUPERFAMILY SSF56425 244 358 2.54E-42 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 18 526 2.6E-204 T 13-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 Gene3D G3DSA:3.50.50.60 20 410 3.8E-152 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_04250 7c439421b08648a2177818f33b3ccb73 553 SUPERFAMILY SSF51905 10 453 4.54E-70 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_04250 7c439421b08648a2177818f33b3ccb73 553 Gene3D G3DSA:3.90.700.10 254 364 3.8E-152 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 SUPERFAMILY SSF46977 432 531 2.09E-30 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 Pfam PF00890 FAD binding domain 20 398 1.2E-100 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 361 383 1.9E-8 T 13-10-2018 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 21 40 1.9E-8 T 13-10-2018 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 20 42 7.6E-5 T 13-10-2018 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 383 7.6E-5 T 13-10-2018 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 PIRSF PIRSF000171 10 328 1.2E-21 T 13-10-2018 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 PIRSF PIRSF000171 336 544 3.0E-10 T 13-10-2018 ambt_04250 7c439421b08648a2177818f33b3ccb73 553 Pfam PF02910 Fumarate reductase flavoprotein C-term 447 526 8.8E-14 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_10285 12e7423336b32ce6aa36ae5a7765421a 535 Gene3D G3DSA:3.90.226.10 1 272 1.7E-94 T 13-10-2018 ambt_10285 12e7423336b32ce6aa36ae5a7765421a 535 SUPERFAMILY SSF52096 275 535 3.38E-88 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_10285 12e7423336b32ce6aa36ae5a7765421a 535 SUPERFAMILY SSF52096 23 268 1.99E-70 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_10285 12e7423336b32ce6aa36ae5a7765421a 535 Gene3D G3DSA:3.90.226.10 274 535 4.0E-104 T 13-10-2018 ambt_10285 12e7423336b32ce6aa36ae5a7765421a 535 Pfam PF01039 Carboxyl transferase domain 48 525 1.2E-151 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ambt_12495 60807db55b84a37c0c51031007571808 309 Gene3D G3DSA:1.10.10.10 9 99 1.5E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_12495 60807db55b84a37c0c51031007571808 309 Pfam PF03466 LysR substrate binding domain 116 299 1.5E-8 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_12495 60807db55b84a37c0c51031007571808 309 SUPERFAMILY SSF53850 107 305 1.56E-13 T 13-10-2018 ambt_12495 60807db55b84a37c0c51031007571808 309 Gene3D G3DSA:3.40.190.290 105 306 2.2E-7 T 13-10-2018 ambt_12495 60807db55b84a37c0c51031007571808 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 5.0E-12 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_12495 60807db55b84a37c0c51031007571808 309 SUPERFAMILY SSF46785 9 94 2.72E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_18815 4614cfec2c11b141db3ade158157127f 268 Gene3D G3DSA:3.40.190.10 34 112 2.2E-7 T 13-10-2018 ambt_18815 4614cfec2c11b141db3ade158157127f 268 SUPERFAMILY SSF53850 34 241 1.13E-13 T 13-10-2018 ambt_18815 4614cfec2c11b141db3ade158157127f 268 Gene3D G3DSA:3.40.190.10 113 192 2.2E-7 T 13-10-2018 ambt_09570 5ef0b7e794ae9ab986919a9689328e0c 218 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 77 130 2.0E-15 T 13-10-2018 ambt_09570 5ef0b7e794ae9ab986919a9689328e0c 218 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 73 88 - T 13-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ambt_09570 5ef0b7e794ae9ab986919a9689328e0c 218 SUPERFAMILY SSF55681 5 207 2.4E-67 T 13-10-2018 ambt_09570 5ef0b7e794ae9ab986919a9689328e0c 218 Gene3D G3DSA:3.30.930.10 2 204 7.6E-59 T 13-10-2018 ambt_09570 5ef0b7e794ae9ab986919a9689328e0c 218 PIRSF PIRSF016262 3 218 9.5E-59 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ambt_09570 5ef0b7e794ae9ab986919a9689328e0c 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 161 1.1E-4 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ambt_09570 5ef0b7e794ae9ab986919a9689328e0c 218 Hamap MF_00013 Octanoyltransferase [lipB]. 7 208 36.109 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ambt_09570 5ef0b7e794ae9ab986919a9689328e0c 218 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 29 188 2.3E-68 T 13-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ambt_08255 019196cea33528cdb79489964ef58b4e 800 SUPERFAMILY SSF81665 272 501 5.75E-11 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ambt_08255 019196cea33528cdb79489964ef58b4e 800 ProSitePatterns PS01047 Heavy-metal-associated domain. 98 127 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ambt_08255 019196cea33528cdb79489964ef58b4e 800 Gene3D G3DSA:3.40.1110.10 517 629 7.3E-62 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ambt_08255 019196cea33528cdb79489964ef58b4e 800 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 509 515 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ambt_08255 019196cea33528cdb79489964ef58b4e 800 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 247 797 5.4E-154 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ambt_08255 019196cea33528cdb79489964ef58b4e 800 Gene3D G3DSA:3.40.50.1000 487 733 7.3E-62 T 13-10-2018 IPR023214 HAD superfamily ambt_08255 019196cea33528cdb79489964ef58b4e 800 SUPERFAMILY SSF56784 505 794 2.1E-42 T 13-10-2018 IPR036412 HAD-like superfamily ambt_08255 019196cea33528cdb79489964ef58b4e 800 SUPERFAMILY SSF81653 315 407 4.05E-24 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ambt_08255 019196cea33528cdb79489964ef58b4e 800 Pfam PF00403 Heavy-metal-associated domain 97 155 2.0E-10 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ambt_08255 019196cea33528cdb79489964ef58b4e 800 Gene3D G3DSA:2.70.150.20 303 413 3.6E-31 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 279 798 8.8E-112 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 718 730 4.2E-22 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 359 373 4.2E-22 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 521 4.2E-22 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 695 714 4.2E-22 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 281 774 9.0E-70 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ambt_08255 019196cea33528cdb79489964ef58b4e 800 PRINTS PR00943 Copper-transporting ATPase signature 432 446 3.2E-5 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 PRINTS PR00943 Copper-transporting ATPase signature 672 689 3.2E-5 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 PRINTS PR00943 Copper-transporting ATPase signature 298 316 3.2E-5 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 PRINTS PR00943 Copper-transporting ATPase signature 490 505 3.2E-5 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 PRINTS PR00943 Copper-transporting ATPase signature 137 157 3.2E-5 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 PRINTS PR00943 Copper-transporting ATPase signature 232 251 3.2E-5 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 229 797 3.1E-135 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 Pfam PF00702 haloacid dehalogenase-like hydrolase 503 709 1.4E-23 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 6 87 4.0E-25 T 13-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase ambt_08255 019196cea33528cdb79489964ef58b4e 800 Gene3D G3DSA:3.30.70.100 87 158 9.0E-13 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 Pfam PF00122 E1-E2 ATPase 313 487 2.2E-48 T 13-10-2018 ambt_08255 019196cea33528cdb79489964ef58b4e 800 SUPERFAMILY SSF55008 88 164 2.23E-16 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ambt_01190 6474da454f55e10ab97ac1f2f6cb66d3 400 Gene3D G3DSA:3.40.50.2300 63 320 8.8E-9 T 13-10-2018 ambt_01190 6474da454f55e10ab97ac1f2f6cb66d3 400 SUPERFAMILY SSF53822 60 364 7.06E-16 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_01190 6474da454f55e10ab97ac1f2f6cb66d3 400 Gene3D G3DSA:3.40.50.2300 155 269 8.8E-9 T 13-10-2018 ambt_11465 691bee6ec28cc57ff46e00e9eecee4c1 158 PIRSF PIRSF006092 1 158 1.3E-53 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 ambt_11465 691bee6ec28cc57ff46e00e9eecee4c1 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 8.0E-60 T 13-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 ambt_11465 691bee6ec28cc57ff46e00e9eecee4c1 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.293 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 ambt_11465 691bee6ec28cc57ff46e00e9eecee4c1 158 Gene3D G3DSA:1.10.287.180 1 75 2.4E-30 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ambt_11465 691bee6ec28cc57ff46e00e9eecee4c1 158 SUPERFAMILY SSF54534 82 157 1.57E-24 T 13-10-2018 ambt_11465 691bee6ec28cc57ff46e00e9eecee4c1 158 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 5.3E-30 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ambt_11465 691bee6ec28cc57ff46e00e9eecee4c1 158 Gene3D G3DSA:3.10.50.30 76 158 6.0E-32 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 ambt_11465 691bee6ec28cc57ff46e00e9eecee4c1 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ambt_11465 691bee6ec28cc57ff46e00e9eecee4c1 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 157 6.5E-29 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ambt_11465 691bee6ec28cc57ff46e00e9eecee4c1 158 SUPERFAMILY SSF46557 3 78 1.05E-27 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ambt_11465 691bee6ec28cc57ff46e00e9eecee4c1 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ambt_01045 8cfe8ad1c5bce3e854192ee2ef22aee8 295 Pfam PF03466 LysR substrate binding domain 90 292 9.2E-37 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_01045 8cfe8ad1c5bce3e854192ee2ef22aee8 295 Gene3D G3DSA:1.10.10.10 4 89 1.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_01045 8cfe8ad1c5bce3e854192ee2ef22aee8 295 Gene3D G3DSA:3.40.190.290 91 294 5.9E-53 T 13-10-2018 ambt_01045 8cfe8ad1c5bce3e854192ee2ef22aee8 295 SUPERFAMILY SSF53850 90 293 3.26E-38 T 13-10-2018 ambt_01045 8cfe8ad1c5bce3e854192ee2ef22aee8 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 4.1E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_01045 8cfe8ad1c5bce3e854192ee2ef22aee8 295 SUPERFAMILY SSF46785 9 112 1.36E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_14665 addfbfb19caf01571907b7ccf08facbb 210 Gene3D G3DSA:3.40.30.10 11 200 3.5E-79 T 13-10-2018 ambt_14665 addfbfb19caf01571907b7ccf08facbb 210 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 7.7E-15 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_14665 addfbfb19caf01571907b7ccf08facbb 210 SUPERFAMILY SSF52833 7 90 4.16E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_14665 addfbfb19caf01571907b7ccf08facbb 210 SUPERFAMILY SSF47616 82 205 9.1E-26 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_14665 addfbfb19caf01571907b7ccf08facbb 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 192 8.5E-11 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_14665 addfbfb19caf01571907b7ccf08facbb 210 Gene3D G3DSA:1.20.1050.10 89 192 3.5E-79 T 13-10-2018 ambt_20535 e6fb1471864dc99dd8e06d32da9c617e 610 Gene3D G3DSA:3.40.50.10490 250 609 1.7E-149 T 13-10-2018 ambt_20535 e6fb1471864dc99dd8e06d32da9c617e 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 1.0E-258 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ambt_20535 e6fb1471864dc99dd8e06d32da9c617e 610 SUPERFAMILY SSF56235 2 235 7.63E-73 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_20535 e6fb1471864dc99dd8e06d32da9c617e 610 SUPERFAMILY SSF53697 246 610 7.05E-114 T 13-10-2018 ambt_20535 e6fb1471864dc99dd8e06d32da9c617e 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.525 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ambt_20535 e6fb1471864dc99dd8e06d32da9c617e 610 Gene3D G3DSA:3.60.20.10 2 242 1.8E-76 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_20535 e6fb1471864dc99dd8e06d32da9c617e 610 Gene3D G3DSA:3.40.50.10490 448 595 1.7E-149 T 13-10-2018 ambt_20535 e6fb1471864dc99dd8e06d32da9c617e 610 Pfam PF13522 Glutamine amidotransferase domain 67 183 8.7E-20 T 13-10-2018 ambt_20535 e6fb1471864dc99dd8e06d32da9c617e 610 Pfam PF01380 SIS domain 463 592 2.1E-25 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ambt_20535 e6fb1471864dc99dd8e06d32da9c617e 610 Pfam PF01380 SIS domain 291 419 3.9E-33 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ambt_17050 2a6ec30fa04975eb1c23055f3ac60bf4 328 SUPERFAMILY SSF56349 57 318 1.77E-42 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_17050 2a6ec30fa04975eb1c23055f3ac60bf4 328 Gene3D G3DSA:1.10.150.130 53 158 7.2E-14 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_17050 2a6ec30fa04975eb1c23055f3ac60bf4 328 Gene3D G3DSA:1.10.443.10 159 320 1.2E-15 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_17050 2a6ec30fa04975eb1c23055f3ac60bf4 328 Pfam PF00589 Phage integrase family 163 318 1.0E-7 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_12730 4d5d5785c98fd616b713623bcbc41a5f 533 Gene3D G3DSA:3.30.590.20 21 528 1.5E-186 T 13-10-2018 ambt_12730 4d5d5785c98fd616b713623bcbc41a5f 533 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 11 522 1.8E-188 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ambt_12730 4d5d5785c98fd616b713623bcbc41a5f 533 SUPERFAMILY SSF55931 8 519 6.47E-191 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ambt_12730 4d5d5785c98fd616b713623bcbc41a5f 533 Pfam PF04262 Glutamate-cysteine ligase 13 385 4.1E-164 T 13-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ambt_12730 4d5d5785c98fd616b713623bcbc41a5f 533 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 533 203.045 T 13-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ambt_21140 102af38d64a75c4e33fce1ec4ae9e137 273 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 13 259 1.4E-37 T 13-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ambt_21140 102af38d64a75c4e33fce1ec4ae9e137 273 Gene3D G3DSA:3.40.830.10 3 273 3.0E-86 T 13-10-2018 ambt_21140 102af38d64a75c4e33fce1ec4ae9e137 273 PIRSF PIRSF006157 7 273 1.0E-85 T 13-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 ambt_21140 102af38d64a75c4e33fce1ec4ae9e137 273 SUPERFAMILY SSF53213 10 272 3.27E-84 T 13-10-2018 ambt_11935 ca44989b3742941d042ddae1bd3aef1b 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 90 2.0E-7 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ambt_11935 ca44989b3742941d042ddae1bd3aef1b 336 Gene3D G3DSA:3.90.180.10 26 326 9.1E-94 T 13-10-2018 ambt_11935 ca44989b3742941d042ddae1bd3aef1b 336 SUPERFAMILY SSF50129 15 166 1.4E-31 T 13-10-2018 IPR011032 GroES-like superfamily ambt_11935 ca44989b3742941d042ddae1bd3aef1b 336 Gene3D G3DSA:3.40.50.720 142 284 9.1E-94 T 13-10-2018 ambt_11935 ca44989b3742941d042ddae1bd3aef1b 336 SUPERFAMILY SSF51735 136 312 1.88E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_11935 ca44989b3742941d042ddae1bd3aef1b 336 SMART SM00829 12 334 2.7E-14 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ambt_11935 ca44989b3742941d042ddae1bd3aef1b 336 Pfam PF00107 Zinc-binding dehydrogenase 171 296 2.9E-32 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 Pfam PF00696 Amino acid kinase family 7 234 3.8E-39 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 Gene3D G3DSA:2.30.130.10 265 364 1.1E-10 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 Gene3D G3DSA:3.40.1160.10 2 261 1.2E-75 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 SUPERFAMILY SSF53633 7 256 8.51E-60 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 Hamap MF_00456 Glutamate 5-kinase [proB]. 7 258 31.141 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 PRINTS PR00474 Glutamate 5-kinase family signature 114 135 1.9E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 PRINTS PR00474 Glutamate 5-kinase family signature 146 173 1.9E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 1.9E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 1.9E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 PIRSF PIRSF000729 2 367 4.8E-97 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 351 4.8E-94 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ambt_09425 081f2ce9b09d515a0d12b5a7a457f142 369 SUPERFAMILY SSF88697 276 345 9.94E-9 T 13-10-2018 IPR015947 PUA-like superfamily ambt_02040 6abcac9b7610b13e4df26bdaf7813145 347 Gene3D G3DSA:3.30.450.90 1 100 7.1E-35 T 13-10-2018 ambt_02040 6abcac9b7610b13e4df26bdaf7813145 347 Pfam PF00437 Type II/IV secretion system protein 11 269 2.5E-51 T 13-10-2018 IPR001482 Type II/IV secretion system protein ambt_02040 6abcac9b7610b13e4df26bdaf7813145 347 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 342 2.6E-153 T 13-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 ambt_02040 6abcac9b7610b13e4df26bdaf7813145 347 Gene3D G3DSA:3.40.50.300 101 347 2.1E-105 T 13-10-2018 ambt_02040 6abcac9b7610b13e4df26bdaf7813145 347 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 13-10-2018 IPR001482 Type II/IV secretion system protein ambt_02040 6abcac9b7610b13e4df26bdaf7813145 347 SUPERFAMILY SSF52540 5 334 3.15E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00835 dc5b6f484651918a505fcab5b663b0b8 336 Gene3D G3DSA:3.60.15.10 15 275 1.1E-59 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_00835 dc5b6f484651918a505fcab5b663b0b8 336 SUPERFAMILY SSF56281 7 332 4.19E-71 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_00835 dc5b6f484651918a505fcab5b663b0b8 336 SMART SM00849 34 248 9.6E-26 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_00835 dc5b6f484651918a505fcab5b663b0b8 336 Pfam PF00753 Metallo-beta-lactamase superfamily 33 248 6.3E-29 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_00835 dc5b6f484651918a505fcab5b663b0b8 336 Gene3D G3DSA:1.10.10.10 277 326 2.9E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_21295 e1d36343c0151f66384ca2e20f04d61e 180 Pfam PF13737 Transposase DDE domain 20 131 1.1E-38 T 13-10-2018 IPR025668 Transposase DDE domain ambt_00170 11d1cdb612e5885bc7face6cdf2510b9 246 SUPERFAMILY SSF54909 5 74 7.8E-9 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel ambt_00170 11d1cdb612e5885bc7face6cdf2510b9 246 Gene3D G3DSA:3.30.70.100 137 220 1.2E-10 T 13-10-2018 ambt_00170 11d1cdb612e5885bc7face6cdf2510b9 246 Gene3D G3DSA:3.30.70.100 7 89 7.7E-11 T 13-10-2018 ambt_00170 11d1cdb612e5885bc7face6cdf2510b9 246 Pfam PF03992 Antibiotic biosynthesis monooxygenase 8 67 1.0E-4 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ambt_00170 11d1cdb612e5885bc7face6cdf2510b9 246 Pfam PF03992 Antibiotic biosynthesis monooxygenase 138 197 1.4E-5 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ambt_00170 11d1cdb612e5885bc7face6cdf2510b9 246 SUPERFAMILY SSF54909 137 211 5.9E-8 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel ambt_04025 d0d23e40de10c87b58c66b92badbdd8f 314 SUPERFAMILY SSF56931 53 311 2.88E-83 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_04025 d0d23e40de10c87b58c66b92badbdd8f 314 Gene3D G3DSA:2.40.230.10 50 313 2.0E-81 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_04025 d0d23e40de10c87b58c66b92badbdd8f 314 PRINTS PR01486 Bacterial phospholipase A1 protein signature 96 113 4.6E-27 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_04025 d0d23e40de10c87b58c66b92badbdd8f 314 PRINTS PR01486 Bacterial phospholipase A1 protein signature 140 159 4.6E-27 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_04025 d0d23e40de10c87b58c66b92badbdd8f 314 PRINTS PR01486 Bacterial phospholipase A1 protein signature 170 184 4.6E-27 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_04025 d0d23e40de10c87b58c66b92badbdd8f 314 PRINTS PR01486 Bacterial phospholipase A1 protein signature 284 304 4.6E-27 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_04025 d0d23e40de10c87b58c66b92badbdd8f 314 PRINTS PR01486 Bacterial phospholipase A1 protein signature 185 203 4.6E-27 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_04025 d0d23e40de10c87b58c66b92badbdd8f 314 Pfam PF02253 Phospholipase A1 50 311 3.0E-87 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_10510 8ba9d13e9b8c66206198a97ffe76d66f 378 Pfam PF13439 Glycosyltransferase Family 4 55 176 2.8E-7 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ambt_10510 8ba9d13e9b8c66206198a97ffe76d66f 378 SUPERFAMILY SSF53756 3 372 4.13E-51 T 13-10-2018 ambt_10510 8ba9d13e9b8c66206198a97ffe76d66f 378 Gene3D G3DSA:3.40.50.2000 3 191 8.8E-10 T 13-10-2018 ambt_10510 8ba9d13e9b8c66206198a97ffe76d66f 378 Gene3D G3DSA:3.40.50.2000 192 364 6.4E-32 T 13-10-2018 ambt_10510 8ba9d13e9b8c66206198a97ffe76d66f 378 Pfam PF00534 Glycosyl transferases group 1 188 354 7.5E-24 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_08410 81a30ee8d83453330a835bd6c674e55e 193 SUPERFAMILY SSF56935 42 191 1.95E-5 T 13-10-2018 ambt_16315 1e3aa03420c93318cdfb8b36a70a5dc1 309 Pfam PF04261 Dyp-type peroxidase family 34 297 2.5E-48 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ambt_16315 1e3aa03420c93318cdfb8b36a70a5dc1 309 SUPERFAMILY SSF54909 1 300 2.86E-86 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel ambt_16315 1e3aa03420c93318cdfb8b36a70a5dc1 309 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 297 2.6E-48 T 13-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ambt_21695 de0cc8bddff07e9fc5432479cc3ae15c 197 SUPERFAMILY SSF55729 1 183 1.7E-22 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_21695 de0cc8bddff07e9fc5432479cc3ae15c 197 Gene3D G3DSA:3.40.630.30 4 193 7.7E-29 T 13-10-2018 ambt_21695 de0cc8bddff07e9fc5432479cc3ae15c 197 Pfam PF00583 Acetyltransferase (GNAT) family 56 179 6.6E-10 T 13-10-2018 IPR000182 GNAT domain ambt_11890 d58ed7626be02e966e9d20db24273c11 544 Pfam PF02470 MlaD protein 284 386 2.5E-11 T 13-10-2018 IPR003399 Mce/MlaD ambt_11890 d58ed7626be02e966e9d20db24273c11 544 Pfam PF02470 MlaD protein 40 127 1.2E-11 T 13-10-2018 IPR003399 Mce/MlaD ambt_13030 3da4af5d44dac036df2a2b104715e299 380 Gene3D G3DSA:1.10.8.60 182 265 1.1E-25 T 13-10-2018 ambt_13030 3da4af5d44dac036df2a2b104715e299 380 SUPERFAMILY SSF46689 224 370 6.45E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_13030 3da4af5d44dac036df2a2b104715e299 380 SUPERFAMILY SSF52540 10 252 8.92E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13030 3da4af5d44dac036df2a2b104715e299 380 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 224 233 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ambt_13030 3da4af5d44dac036df2a2b104715e299 380 Pfam PF00158 Sigma-54 interaction domain 11 173 4.1E-59 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ambt_13030 3da4af5d44dac036df2a2b104715e299 380 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 96 111 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ambt_13030 3da4af5d44dac036df2a2b104715e299 380 Pfam PF02954 Bacterial regulatory protein, Fis family 333 368 3.7E-5 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_13030 3da4af5d44dac036df2a2b104715e299 380 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 10 368 5.3E-165 T 13-10-2018 IPR014317 Transcription activator PspF ambt_13030 3da4af5d44dac036df2a2b104715e299 380 Gene3D G3DSA:3.40.50.300 1 181 2.9E-57 T 13-10-2018 ambt_13030 3da4af5d44dac036df2a2b104715e299 380 Gene3D G3DSA:1.10.10.60 308 371 8.2E-9 T 13-10-2018 ambt_13030 3da4af5d44dac036df2a2b104715e299 380 SMART SM00382 30 177 8.7E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 Gene3D G3DSA:1.10.1440.20 604 663 4.2E-17 T 13-10-2018 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 SUPERFAMILY SSF52016 648 901 9.81E-80 T 13-10-2018 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 ProSitePatterns PS00450 Aconitase family signature 1. 440 456 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 Pfam PF00694 Aconitase C-terminal domain 704 830 9.6E-47 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 Gene3D G3DSA:3.30.499.10 369 603 2.8E-100 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 25 901 0.0 T 13-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 Pfam PF00330 Aconitase family (aconitate hydratase) 61 575 1.1E-182 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 Gene3D G3DSA:3.20.19.10 666 902 2.2E-102 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 SUPERFAMILY SSF53732 5 639 6.41E-224 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 PRINTS PR00415 Aconitase family signature 274 287 2.0E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 PRINTS PR00415 Aconitase family signature 141 154 2.0E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 PRINTS PR00415 Aconitase family signature 212 227 2.0E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 PRINTS PR00415 Aconitase family signature 288 301 2.0E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 PRINTS PR00415 Aconitase family signature 506 519 2.0E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 PRINTS PR00415 Aconitase family signature 165 173 2.0E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 PRINTS PR00415 Aconitase family signature 444 455 2.0E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 PRINTS PR00415 Aconitase family signature 198 211 2.0E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 PRINTS PR00415 Aconitase family signature 368 382 2.0E-44 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 ProSitePatterns PS01244 Aconitase family signature 2. 506 519 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ambt_16560 e039ef3f8493d49b31f2f60087cc100f 903 Gene3D G3DSA:3.30.499.20 3 368 3.4E-162 T 13-10-2018 ambt_11335 af229420f110802834b27a53eaf8e54c 177 Gene3D G3DSA:3.10.560.10 21 174 5.8E-22 T 13-10-2018 ambt_11335 af229420f110802834b27a53eaf8e54c 177 Pfam PF10531 SLBB domain 103 151 5.0E-10 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_11335 af229420f110802834b27a53eaf8e54c 177 Gene3D G3DSA:3.30.1950.10 29 100 5.8E-22 T 13-10-2018 ambt_11335 af229420f110802834b27a53eaf8e54c 177 Pfam PF02563 Polysaccharide biosynthesis/export protein 22 96 1.6E-13 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 ambt_08120 72968262612af803e0451606a456bc0d 474 Gene3D G3DSA:1.25.40.80 122 282 7.1E-86 T 13-10-2018 ambt_08120 72968262612af803e0451606a456bc0d 474 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 320 332 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal ambt_08120 72968262612af803e0451606a456bc0d 474 Gene3D G3DSA:1.10.579.10 289 474 1.1E-84 T 13-10-2018 ambt_08120 72968262612af803e0451606a456bc0d 474 Pfam PF03441 FAD binding domain of DNA photolyase 271 470 1.0E-89 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 ambt_08120 72968262612af803e0451606a456bc0d 474 SUPERFAMILY SSF52425 1 164 1.11E-52 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 ambt_08120 72968262612af803e0451606a456bc0d 474 SUPERFAMILY SSF48173 190 473 1.19E-116 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 ambt_08120 72968262612af803e0451606a456bc0d 474 Pfam PF00875 DNA photolyase 1 151 9.7E-43 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 ambt_08120 72968262612af803e0451606a456bc0d 474 Gene3D G3DSA:3.40.50.620 1 201 7.1E-86 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_08120 72968262612af803e0451606a456bc0d 474 PRINTS PR00147 DNA photolyase signature 131 147 4.9E-23 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ambt_08120 72968262612af803e0451606a456bc0d 474 PRINTS PR00147 DNA photolyase signature 320 336 4.9E-23 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ambt_08120 72968262612af803e0451606a456bc0d 474 PRINTS PR00147 DNA photolyase signature 340 358 4.9E-23 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ambt_08120 72968262612af803e0451606a456bc0d 474 PRINTS PR00147 DNA photolyase signature 379 393 4.9E-23 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ambt_17935 9523a4d2b02cbc5a8f8c2c5c079fef4b 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 63 79 2.3E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_17935 9523a4d2b02cbc5a8f8c2c5c079fef4b 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 63 2.3E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_17935 9523a4d2b02cbc5a8f8c2c5c079fef4b 258 SUPERFAMILY SSF48008 95 224 2.46E-15 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_17935 9523a4d2b02cbc5a8f8c2c5c079fef4b 258 Pfam PF07729 FCD domain 100 223 7.2E-16 T 13-10-2018 IPR011711 GntR, C-terminal ambt_17935 9523a4d2b02cbc5a8f8c2c5c079fef4b 258 Gene3D G3DSA:1.20.120.530 93 228 4.8E-18 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_17935 9523a4d2b02cbc5a8f8c2c5c079fef4b 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 82 9.1E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_17935 9523a4d2b02cbc5a8f8c2c5c079fef4b 258 SUPERFAMILY SSF46785 24 93 1.94E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_17935 9523a4d2b02cbc5a8f8c2c5c079fef4b 258 SMART SM00345 31 89 1.8E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_17935 9523a4d2b02cbc5a8f8c2c5c079fef4b 258 Gene3D G3DSA:1.10.10.10 20 90 1.2E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_17935 9523a4d2b02cbc5a8f8c2c5c079fef4b 258 SMART SM00895 99 223 1.6E-9 T 13-10-2018 IPR011711 GntR, C-terminal ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 Gene3D G3DSA:3.30.70.2570 481 555 9.2E-34 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 Pfam PF00679 Elongation factor G C-terminus 401 485 2.5E-19 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 Gene3D G3DSA:3.30.70.870 288 369 1.6E-34 T 13-10-2018 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 178 1.6E-18 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 Pfam PF03144 Elongation factor Tu domain 2 207 277 9.0E-9 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 PRINTS PR00315 GTP-binding elongation factor signature 128 137 3.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 PRINTS PR00315 GTP-binding elongation factor signature 8 21 3.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 PRINTS PR00315 GTP-binding elongation factor signature 92 103 3.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 PRINTS PR00315 GTP-binding elongation factor signature 76 86 3.8E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 SUPERFAMILY SSF54980 294 372 3.6E-18 T 13-10-2018 IPR035647 EF-G domain III/V-like ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 Gene3D G3DSA:3.30.70.3380 370 480 3.2E-40 T 13-10-2018 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 SMART SM00838 400 487 0.0078 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 Gene3D G3DSA:2.40.30.10 188 287 3.2E-35 T 13-10-2018 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 304.276 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 TIGRFAM TIGR01393 lepA: elongation factor 4 5 596 8.2E-300 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 SUPERFAMILY SSF50447 167 290 7.29E-28 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 Pfam PF00009 Elongation factor Tu GTP binding domain 5 183 2.7E-53 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 Pfam PF06421 GTP-binding protein LepA C-terminus 489 595 3.1E-49 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 SUPERFAMILY SSF52540 1 207 2.37E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 SUPERFAMILY SSF54980 401 495 4.03E-24 T 13-10-2018 IPR035647 EF-G domain III/V-like ambt_04280 770641a7b97f8e6df35c2259d2b6b08b 598 Gene3D G3DSA:3.40.50.300 1 187 3.6E-71 T 13-10-2018 ambt_19655 d6d1dd3c7b589594e4e39e8ac8e1ae19 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.883 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ambt_19655 d6d1dd3c7b589594e4e39e8ac8e1ae19 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 13-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19655 d6d1dd3c7b589594e4e39e8ac8e1ae19 142 SUPERFAMILY SSF54747 3 73 7.46E-30 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ambt_19655 d6d1dd3c7b589594e4e39e8ac8e1ae19 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-15 T 13-10-2018 ambt_19655 d6d1dd3c7b589594e4e39e8ac8e1ae19 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal ambt_19655 d6d1dd3c7b589594e4e39e8ac8e1ae19 142 Gene3D G3DSA:1.10.10.2720 73 142 8.0E-30 T 13-10-2018 ambt_19655 d6d1dd3c7b589594e4e39e8ac8e1ae19 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 5.5E-66 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19655 d6d1dd3c7b589594e4e39e8ac8e1ae19 142 SMART SM00649 9 141 1.3E-86 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ambt_19655 d6d1dd3c7b589594e4e39e8ac8e1ae19 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.6E-26 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 ambt_19655 d6d1dd3c7b589594e4e39e8ac8e1ae19 142 SUPERFAMILY SSF46906 68 141 3.4E-27 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ambt_19655 d6d1dd3c7b589594e4e39e8ac8e1ae19 142 Gene3D G3DSA:3.30.1550.10 2 72 3.2E-35 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ambt_20165 b06901f24dd662b2c9afca287d87ea47 542 SUPERFAMILY SSF52540 334 527 5.54E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20165 b06901f24dd662b2c9afca287d87ea47 542 SMART SM00382 354 532 1.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_20165 b06901f24dd662b2c9afca287d87ea47 542 Gene3D G3DSA:3.40.50.300 332 540 8.8E-37 T 13-10-2018 ambt_20165 b06901f24dd662b2c9afca287d87ea47 542 Pfam PF00005 ABC transporter 347 483 4.2E-17 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_10785 ba58ef69c81cd2b71d2c21b02cb78cbe 360 Pfam PF06516 Purine nucleoside permease (NUP) 31 355 9.1E-111 T 13-10-2018 IPR009486 Purine nucleoside permease GO:0055085 ambt_10785 ba58ef69c81cd2b71d2c21b02cb78cbe 360 PIRSF PIRSF013171 2 359 2.7E-91 T 13-10-2018 IPR009486 Purine nucleoside permease GO:0055085 ambt_22090 ead182d8ce00b80b76e8e11fe2723ce5 446 TIGRFAM TIGR03356 BGL: beta-galactosidase 15 438 7.6E-177 T 13-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 ambt_22090 ead182d8ce00b80b76e8e11fe2723ce5 446 Pfam PF00232 Glycosyl hydrolase family 1 14 444 8.7E-143 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_22090 ead182d8ce00b80b76e8e11fe2723ce5 446 Gene3D G3DSA:3.20.20.80 9 446 3.8E-157 T 13-10-2018 ambt_22090 ead182d8ce00b80b76e8e11fe2723ce5 446 SUPERFAMILY SSF51445 16 445 7.75E-150 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_22090 ead182d8ce00b80b76e8e11fe2723ce5 446 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 351 359 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site ambt_22090 ead182d8ce00b80b76e8e11fe2723ce5 446 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 382 1.0E-22 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_22090 ead182d8ce00b80b76e8e11fe2723ce5 446 PRINTS PR00131 Glycosyl hydrolase family 1 signature 290 304 1.0E-22 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_22090 ead182d8ce00b80b76e8e11fe2723ce5 446 PRINTS PR00131 Glycosyl hydrolase family 1 signature 351 359 1.0E-22 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_22090 ead182d8ce00b80b76e8e11fe2723ce5 446 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 428 1.0E-22 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_22090 ead182d8ce00b80b76e8e11fe2723ce5 446 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 409 1.0E-22 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_02435 3b37366e1946583f84e1687f07a2d1d9 590 Pfam PF02225 PA domain 165 254 2.0E-6 T 13-10-2018 IPR003137 PA domain ambt_02435 3b37366e1946583f84e1687f07a2d1d9 590 Pfam PF04389 Peptidase family M28 329 521 4.7E-44 T 13-10-2018 IPR007484 Peptidase M28 ambt_02435 3b37366e1946583f84e1687f07a2d1d9 590 Gene3D G3DSA:3.40.630.10 282 546 1.1E-44 T 13-10-2018 ambt_02435 3b37366e1946583f84e1687f07a2d1d9 590 SUPERFAMILY SSF53187 66 547 1.8E-56 T 13-10-2018 ambt_08775 5449776d34111a61c39e23def81755ea 262 SUPERFAMILY SSF56399 103 254 3.79E-18 T 13-10-2018 ambt_08775 5449776d34111a61c39e23def81755ea 262 Gene3D G3DSA:3.90.176.10 76 250 4.7E-26 T 13-10-2018 ambt_12860 46f0a77e4297b5b8102e8d58699dacff 149 Gene3D G3DSA:3.40.630.30 11 149 1.7E-37 T 13-10-2018 ambt_12860 46f0a77e4297b5b8102e8d58699dacff 149 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 23 145 4.6E-32 T 13-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 ambt_12860 46f0a77e4297b5b8102e8d58699dacff 149 SUPERFAMILY SSF55729 19 145 2.53E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_12860 46f0a77e4297b5b8102e8d58699dacff 149 Pfam PF00583 Acetyltransferase (GNAT) family 21 123 2.4E-17 T 13-10-2018 IPR000182 GNAT domain ambt_14475 f6a13a2de45368fb11c6960bc5bff36b 174 Pfam PF04239 Protein of unknown function (DUF421) 97 158 6.3E-13 T 13-10-2018 IPR007353 Protein of unknown function DUF421 ambt_14475 f6a13a2de45368fb11c6960bc5bff36b 174 Gene3D G3DSA:3.30.240.20 88 160 6.0E-19 T 13-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily ambt_18765 4c9c3a19e5193dbe681d8288243c4b24 195 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 195 41.638 T 13-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 ambt_18765 4c9c3a19e5193dbe681d8288243c4b24 195 SUPERFAMILY SSF48498 82 191 2.67E-5 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ambt_18765 4c9c3a19e5193dbe681d8288243c4b24 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 57 5.4E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_18765 4c9c3a19e5193dbe681d8288243c4b24 195 SUPERFAMILY SSF46689 5 76 4.49E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_18765 4c9c3a19e5193dbe681d8288243c4b24 195 Gene3D G3DSA:1.10.357.10 7 194 2.7E-64 T 13-10-2018 ambt_03570 0acdac9eb27acd8f40edc04343490085 470 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 26 469 3.8E-160 T 13-10-2018 IPR017464 Sugar transferase, PEP-CTERM system associated ambt_03570 0acdac9eb27acd8f40edc04343490085 470 Gene3D G3DSA:3.40.50.720 141 258 1.5E-7 T 13-10-2018 ambt_03570 0acdac9eb27acd8f40edc04343490085 470 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 469 1.5E-109 T 13-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase ambt_03570 0acdac9eb27acd8f40edc04343490085 470 Pfam PF02397 Bacterial sugar transferase 282 465 2.3E-63 T 13-10-2018 IPR003362 Bacterial sugar transferase ambt_16945 eb4f2e13104e6868154e653b2d6a838d 628 PIRSF PIRSF015855 1 628 1.1E-172 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ambt_16945 eb4f2e13104e6868154e653b2d6a838d 628 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ambt_16945 eb4f2e13104e6868154e653b2d6a838d 628 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 389 411 4.4E-17 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ambt_16945 eb4f2e13104e6868154e653b2d6a838d 628 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 121 133 4.4E-17 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ambt_16945 eb4f2e13104e6868154e653b2d6a838d 628 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 184 203 4.4E-17 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ambt_16945 eb4f2e13104e6868154e653b2d6a838d 628 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 412 426 4.4E-17 T 13-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ambt_16945 eb4f2e13104e6868154e653b2d6a838d 628 Pfam PF01555 DNA methylase 121 446 5.7E-38 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 ambt_16945 eb4f2e13104e6868154e653b2d6a838d 628 SUPERFAMILY SSF53335 89 453 4.41E-61 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_04790 cd14ad2ad87c360d921765b9a82e7180 162 Gene3D G3DSA:3.40.630.30 1 161 2.3E-33 T 13-10-2018 ambt_04790 cd14ad2ad87c360d921765b9a82e7180 162 Pfam PF13302 Acetyltransferase (GNAT) domain 2 141 4.4E-21 T 13-10-2018 IPR000182 GNAT domain ambt_04790 cd14ad2ad87c360d921765b9a82e7180 162 SUPERFAMILY SSF55729 1 154 8.31E-32 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_07940 f6cba133def33ece64dbad44e8d64f30 190 SUPERFAMILY SSF55811 24 181 1.27E-35 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ambt_07940 f6cba133def33ece64dbad44e8d64f30 190 Gene3D G3DSA:3.90.79.10 4 187 1.1E-49 T 13-10-2018 ambt_07940 f6cba133def33ece64dbad44e8d64f30 190 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 13-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 ambt_07940 f6cba133def33ece64dbad44e8d64f30 190 Pfam PF00293 NUDIX domain 29 143 1.2E-15 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ambt_16090 f37d28c46eb66df7d6381b040433bcb8 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 119 130 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ambt_16090 f37d28c46eb66df7d6381b040433bcb8 401 Gene3D G3DSA:3.40.50.620 7 175 3.6E-145 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_16090 f37d28c46eb66df7d6381b040433bcb8 401 Pfam PF00764 Arginosuccinate synthase 8 395 8.0E-149 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ambt_16090 f37d28c46eb66df7d6381b040433bcb8 401 SUPERFAMILY SSF52402 5 168 5.82E-47 T 13-10-2018 ambt_16090 f37d28c46eb66df7d6381b040433bcb8 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 395 6.1E-139 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ambt_16090 f37d28c46eb66df7d6381b040433bcb8 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 400 51.242 T 13-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ambt_16090 f37d28c46eb66df7d6381b040433bcb8 401 SUPERFAMILY SSF69864 175 400 1.57E-85 T 13-10-2018 ambt_16090 f37d28c46eb66df7d6381b040433bcb8 401 Gene3D G3DSA:3.90.1260.10 66 355 3.6E-145 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ambt_16090 f37d28c46eb66df7d6381b040433bcb8 401 Gene3D G3DSA:1.20.5.470 366 401 3.5E-8 T 13-10-2018 ambt_16090 f37d28c46eb66df7d6381b040433bcb8 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ambt_02615 dae9ccc75cd88046eb63e038bb3168eb 297 SUPERFAMILY SSF103481 47 134 1.03E-9 T 13-10-2018 ambt_02615 dae9ccc75cd88046eb63e038bb3168eb 297 SUPERFAMILY SSF103481 205 290 7.85E-13 T 13-10-2018 ambt_02615 dae9ccc75cd88046eb63e038bb3168eb 297 Pfam PF00892 EamA-like transporter family 145 284 6.0E-13 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_02615 dae9ccc75cd88046eb63e038bb3168eb 297 Pfam PF00892 EamA-like transporter family 7 131 1.2E-11 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_17915 4fcad781a436b0a33f6916088c01eff5 483 Pfam PF00171 Aldehyde dehydrogenase family 11 472 6.3E-154 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_17915 4fcad781a436b0a33f6916088c01eff5 483 Gene3D G3DSA:3.40.605.10 1 252 4.8E-78 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_17915 4fcad781a436b0a33f6916088c01eff5 483 Gene3D G3DSA:3.40.309.10 253 483 8.3E-76 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ambt_17915 4fcad781a436b0a33f6916088c01eff5 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ambt_17915 4fcad781a436b0a33f6916088c01eff5 483 SUPERFAMILY SSF53720 3 474 1.57E-146 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 SUPERFAMILY SSF82714 735 809 8.76E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 SUPERFAMILY SSF82693 39 133 7.32E-27 T 13-10-2018 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 Gene3D G3DSA:3.30.70.1430 580 681 0.0 T 13-10-2018 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 Gene3D G3DSA:1.20.1640.10 526 1040 0.0 T 13-10-2018 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 SUPERFAMILY SSF82693 578 684 1.02E-29 T 13-10-2018 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 SUPERFAMILY SSF82714 183 273 3.79E-22 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1052 0.0 T 13-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 Gene3D G3DSA:3.30.2090.10 180 276 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 Gene3D G3DSA:1.20.1640.10 9 525 0.0 T 13-10-2018 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 SUPERFAMILY SSF82866 848 1043 1.57E-38 T 13-10-2018 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 SUPERFAMILY SSF82693 136 331 4.71E-23 T 13-10-2018 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 PRINTS PR00702 Acriflavin resistance protein family signature 565 582 1.5E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.5E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.5E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 PRINTS PR00702 Acriflavin resistance protein family signature 634 648 1.5E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.5E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.5E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.5E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.5E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.5E-103 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 Pfam PF00873 AcrB/AcrD/AcrF family 3 1044 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 SUPERFAMILY SSF82866 297 498 4.19E-50 T 13-10-2018 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 SUPERFAMILY SSF82693 685 874 4.45E-19 T 13-10-2018 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 Gene3D G3DSA:3.30.70.1430 39 834 0.0 T 13-10-2018 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 Gene3D G3DSA:3.30.2090.10 734 826 0.0 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 Gene3D G3DSA:3.30.70.1440 682 883 0.0 T 13-10-2018 ambt_03280 e7ea420d8423e02e52dbc038b889ada6 1080 Gene3D G3DSA:3.30.70.1320 134 333 0.0 T 13-10-2018 ambt_17170 b6aa7673ae034f27140d481b94b7ec28 180 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_17170 b6aa7673ae034f27140d481b94b7ec28 180 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 5.3E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_17170 b6aa7673ae034f27140d481b94b7ec28 180 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 1.3E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_01175 ed12f823c5effb2f9adf8a2f02a1fb56 300 TIGRFAM TIGR03861 phenyl_ABC_PedC: alcohol ABC transporter, permease protein 3 253 4.0E-124 T 13-10-2018 IPR022403 Alcohol ABC transporter, permease protein ambt_01175 ed12f823c5effb2f9adf8a2f02a1fb56 300 PRINTS PR00164 ABC-2 type transport system membrane protein signature 141 165 4.5E-11 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_01175 ed12f823c5effb2f9adf8a2f02a1fb56 300 PRINTS PR00164 ABC-2 type transport system membrane protein signature 178 197 4.5E-11 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_01175 ed12f823c5effb2f9adf8a2f02a1fb56 300 PRINTS PR00164 ABC-2 type transport system membrane protein signature 24 45 4.5E-11 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_01175 ed12f823c5effb2f9adf8a2f02a1fb56 300 Pfam PF01061 ABC-2 type transporter 8 223 5.6E-34 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ambt_01175 ed12f823c5effb2f9adf8a2f02a1fb56 300 PIRSF PIRSF006648 6 254 8.9E-42 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ambt_11580 ef2d7882d5d229654780153fda9e6bb7 212 Gene3D G3DSA:3.40.50.150 1 207 8.8E-52 T 13-10-2018 ambt_11580 ef2d7882d5d229654780153fda9e6bb7 212 PIRSF PIRSF023956 1 212 5.7E-73 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 ambt_11580 ef2d7882d5d229654780153fda9e6bb7 212 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 1 211 36.088 T 13-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 ambt_11580 ef2d7882d5d229654780153fda9e6bb7 212 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 1 190 9.1E-57 T 13-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 ambt_11580 ef2d7882d5d229654780153fda9e6bb7 212 SUPERFAMILY SSF53335 1 193 1.35E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_11580 ef2d7882d5d229654780153fda9e6bb7 212 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 4 204 1.1E-72 T 13-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 ambt_03705 70093cf17e7d5358ad881d7a3bcf122b 338 Gene3D G3DSA:3.90.25.10 183 331 4.3E-96 T 13-10-2018 ambt_03705 70093cf17e7d5358ad881d7a3bcf122b 338 Gene3D G3DSA:3.40.50.720 4 319 4.3E-96 T 13-10-2018 ambt_03705 70093cf17e7d5358ad881d7a3bcf122b 338 SUPERFAMILY SSF51735 1 337 1.04E-89 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_03705 70093cf17e7d5358ad881d7a3bcf122b 338 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 265 5.9E-55 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ambt_03705 70093cf17e7d5358ad881d7a3bcf122b 338 PRINTS PR01713 Nucleotide sugar epimerase signature 259 274 1.6E-28 T 13-10-2018 ambt_03705 70093cf17e7d5358ad881d7a3bcf122b 338 PRINTS PR01713 Nucleotide sugar epimerase signature 219 234 1.6E-28 T 13-10-2018 ambt_03705 70093cf17e7d5358ad881d7a3bcf122b 338 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.6E-28 T 13-10-2018 ambt_03705 70093cf17e7d5358ad881d7a3bcf122b 338 PRINTS PR01713 Nucleotide sugar epimerase signature 298 315 1.6E-28 T 13-10-2018 ambt_03735 c98404f96202f8c22d0154e78bb68e94 486 SMART SM00098 43 450 1.3E-83 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_03735 c98404f96202f8c22d0154e78bb68e94 486 Pfam PF00245 Alkaline phosphatase 44 446 9.0E-89 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_03735 c98404f96202f8c22d0154e78bb68e94 486 Gene3D G3DSA:3.40.720.10 46 440 2.7E-126 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ambt_03735 c98404f96202f8c22d0154e78bb68e94 486 PRINTS PR00113 Alkaline phosphatase signature 97 112 7.6E-26 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_03735 c98404f96202f8c22d0154e78bb68e94 486 PRINTS PR00113 Alkaline phosphatase signature 134 154 7.6E-26 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_03735 c98404f96202f8c22d0154e78bb68e94 486 PRINTS PR00113 Alkaline phosphatase signature 249 278 7.6E-26 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_03735 c98404f96202f8c22d0154e78bb68e94 486 PRINTS PR00113 Alkaline phosphatase signature 184 194 7.6E-26 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_03735 c98404f96202f8c22d0154e78bb68e94 486 PRINTS PR00113 Alkaline phosphatase signature 42 62 7.6E-26 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_03735 c98404f96202f8c22d0154e78bb68e94 486 SUPERFAMILY SSF53649 29 448 3.01E-102 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ambt_03735 c98404f96202f8c22d0154e78bb68e94 486 ProSitePatterns PS00123 Alkaline phosphatase active site. 97 105 - T 13-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_03735 c98404f96202f8c22d0154e78bb68e94 486 Gene3D G3DSA:1.10.60.40 325 409 2.7E-126 T 13-10-2018 ambt_03540 f28a4287ad8cec27c4c38dc542358bbf 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 331 471 9.4E-62 T 13-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 ambt_03540 f28a4287ad8cec27c4c38dc542358bbf 476 Pfam PF00294 pfkB family carbohydrate kinase 9 301 3.4E-46 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB ambt_03540 f28a4287ad8cec27c4c38dc542358bbf 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 4 309 8.2E-123 T 13-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 ambt_03540 f28a4287ad8cec27c4c38dc542358bbf 476 SUPERFAMILY SSF52374 340 470 2.66E-24 T 13-10-2018 ambt_03540 f28a4287ad8cec27c4c38dc542358bbf 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 341 407 9.1E-18 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ambt_03540 f28a4287ad8cec27c4c38dc542358bbf 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 2 473 41.855 T 13-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 ambt_03540 f28a4287ad8cec27c4c38dc542358bbf 476 SUPERFAMILY SSF53613 9 305 2.81E-58 T 13-10-2018 IPR029056 Ribokinase-like ambt_03540 f28a4287ad8cec27c4c38dc542358bbf 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 49 72 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ambt_03540 f28a4287ad8cec27c4c38dc542358bbf 476 Gene3D G3DSA:3.40.50.620 321 475 7.5E-40 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_03540 f28a4287ad8cec27c4c38dc542358bbf 476 Gene3D G3DSA:3.40.1190.20 2 307 2.1E-112 T 13-10-2018 IPR029056 Ribokinase-like ambt_03540 f28a4287ad8cec27c4c38dc542358bbf 476 Pfam PF01467 Cytidylyltransferase-like 344 469 1.1E-15 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ambt_00445 11b2dac3de25144a80be41adad64167c 446 Pfam PF11973 NQRA C-terminal domain 261 310 2.1E-18 T 13-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 ambt_00445 11b2dac3de25144a80be41adad64167c 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 2.6E-180 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 ambt_00445 11b2dac3de25144a80be41adad64167c 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 45.072 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 ambt_00445 11b2dac3de25144a80be41adad64167c 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 8.3E-109 T 13-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 ambt_15100 75c59559021563c005ea108ee71f3037 477 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 358 476 2.4E-30 T 13-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain ambt_15100 75c59559021563c005ea108ee71f3037 477 Pfam PF13746 4Fe-4S dicluster domain 220 329 1.2E-45 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ambt_15100 75c59559021563c005ea108ee71f3037 477 Gene3D G3DSA:2.60.40.10 359 476 6.0E-36 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_15100 75c59559021563c005ea108ee71f3037 477 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 45 476 6.2E-165 T 13-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 ambt_15100 75c59559021563c005ea108ee71f3037 477 SUPERFAMILY SSF54862 106 358 6.17E-28 T 13-10-2018 ambt_15100 75c59559021563c005ea108ee71f3037 477 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 276 287 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ambt_15100 75c59559021563c005ea108ee71f3037 477 Pfam PF12801 4Fe-4S binding domain 96 137 1.2E-8 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ambt_18560 58514428bf282949521b5131aedfab93 549 Pfam PF02652 L-lactate permease 7 536 5.5E-107 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ambt_18560 58514428bf282949521b5131aedfab93 549 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 2 536 1.3E-104 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 Gene3D G3DSA:1.10.287.470 116 213 3.6E-9 T 13-10-2018 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 Pfam PF13533 Biotin-lipoyl like 89 119 6.8E-8 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 Gene3D G3DSA:2.40.50.100 81 115 3.6E-9 T 13-10-2018 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 52 75 2.7E-44 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 418 433 2.7E-44 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 321 342 2.7E-44 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 94 114 2.7E-44 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 378 401 2.7E-44 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 354 378 2.7E-44 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 433 453 2.7E-44 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 Pfam PF13437 HlyD family secretion protein 309 421 3.1E-16 T 13-10-2018 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 ProSitePatterns PS00543 HlyD family secretion proteins signature. 418 440 - T 13-10-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 Gene3D G3DSA:2.40.30.170 323 436 9.3E-13 T 13-10-2018 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 48 454 1.2E-111 T 13-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 SUPERFAMILY SSF111369 91 148 1.7E-6 T 13-10-2018 ambt_13565 7f0cab379faff324c9b9d0e18a9e1b27 454 Gene3D G3DSA:2.40.30.170 70 80 3.6E-9 T 13-10-2018 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 56.949 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 SUPERFAMILY SSF51338 2 177 9.36E-62 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 Gene3D G3DSA:2.30.40.10 4 480 3.0E-298 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 Pfam PF01979 Amidohydrolase family 125 454 1.3E-82 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 3.5E-54 T 13-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 SUPERFAMILY SSF51338 422 477 7.77E-7 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 13-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 SUPERFAMILY SSF51556 129 567 1.67E-200 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 567 1.7E-293 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 Gene3D G3DSA:3.20.20.140 129 567 3.0E-298 T 13-10-2018 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 5.3E-34 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 5.3E-34 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 5.3E-34 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 5.3E-34 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20635 ebcbc99e6f938ebe49fbd9fa72489328 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 13-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_02030 37c3d8bf31186f42e9babe5e056c3fc7 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 269 1.5E-76 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ambt_02030 37c3d8bf31186f42e9babe5e056c3fc7 273 Gene3D G3DSA:3.40.50.720 1 165 1.0E-52 T 13-10-2018 ambt_02030 37c3d8bf31186f42e9babe5e056c3fc7 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 100 6.2E-23 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ambt_02030 37c3d8bf31186f42e9babe5e056c3fc7 273 SUPERFAMILY SSF51735 4 161 2.02E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_02030 37c3d8bf31186f42e9babe5e056c3fc7 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 269 3.9E-30 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ambt_02030 37c3d8bf31186f42e9babe5e056c3fc7 273 PIRSF PIRSF000193 3 272 1.2E-76 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ambt_02030 37c3d8bf31186f42e9babe5e056c3fc7 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 269 25.442 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ambt_02030 37c3d8bf31186f42e9babe5e056c3fc7 273 Gene3D G3DSA:1.10.3730.10 166 273 6.9E-33 T 13-10-2018 ambt_02030 37c3d8bf31186f42e9babe5e056c3fc7 273 SUPERFAMILY SSF48179 163 272 2.21E-29 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_14350 1d2aa96f9d4b71a3a175a0fa780f4a43 238 Pfam PF01895 PhoU domain 131 213 7.7E-14 T 13-10-2018 IPR026022 PhoU domain ambt_14350 1d2aa96f9d4b71a3a175a0fa780f4a43 238 Pfam PF01895 PhoU domain 26 112 7.1E-19 T 13-10-2018 IPR026022 PhoU domain ambt_14350 1d2aa96f9d4b71a3a175a0fa780f4a43 238 SUPERFAMILY SSF109755 13 232 5.13E-61 T 13-10-2018 ambt_14350 1d2aa96f9d4b71a3a175a0fa780f4a43 238 Gene3D G3DSA:1.20.58.220 1 118 3.5E-36 T 13-10-2018 IPR038078 PhoU-like domain superfamily ambt_14350 1d2aa96f9d4b71a3a175a0fa780f4a43 238 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 14 221 1.7E-60 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ambt_14350 1d2aa96f9d4b71a3a175a0fa780f4a43 238 Gene3D G3DSA:1.20.58.220 123 236 5.3E-25 T 13-10-2018 IPR038078 PhoU-like domain superfamily ambt_14350 1d2aa96f9d4b71a3a175a0fa780f4a43 238 PIRSF PIRSF003107 7 227 6.2E-61 T 13-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ambt_18440 1e825617f5ffa21c3eae71b248f858c3 357 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 49 336 9.3E-42 T 13-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system ambt_18440 1e825617f5ffa21c3eae71b248f858c3 357 Gene3D G3DSA:3.10.450.620 40 122 5.0E-5 T 13-10-2018 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 Pfam PF14492 Elongation Factor G, domain II 400 474 3.8E-28 T 13-10-2018 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 Pfam PF00009 Elongation factor Tu GTP binding domain 7 278 3.3E-61 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 Hamap MF_00054_B Elongation factor G [fusA]. 3 687 101.102 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 Gene3D G3DSA:3.30.70.240 600 670 7.2E-83 T 13-10-2018 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 Pfam PF03144 Elongation factor Tu domain 2 320 387 4.8E-16 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 Gene3D G3DSA:3.30.230.10 480 683 7.2E-83 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_11110 896640591db7b2508ccdcdaf78e13586 694 Pfam PF00679 Elongation factor G C-terminus 596 682 1.9E-27 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like ambt_11110 896640591db7b2508ccdcdaf78e13586 694 SUPERFAMILY SSF54211 475 594 8.6E-40 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_11110 896640591db7b2508ccdcdaf78e13586 694 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 688 4.5E-289 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 SUPERFAMILY SSF52540 4 278 7.03E-100 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_11110 896640591db7b2508ccdcdaf78e13586 694 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site ambt_11110 896640591db7b2508ccdcdaf78e13586 694 Gene3D G3DSA:2.40.30.10 291 412 1.0E-41 T 13-10-2018 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 Gene3D G3DSA:3.30.70.870 429 479 9.6E-20 T 13-10-2018 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 SUPERFAMILY SSF54980 400 477 1.8E-20 T 13-10-2018 IPR035647 EF-G domain III/V-like ambt_11110 896640591db7b2508ccdcdaf78e13586 694 SUPERFAMILY SSF54980 599 690 9.71E-29 T 13-10-2018 IPR035647 EF-G domain III/V-like ambt_11110 896640591db7b2508ccdcdaf78e13586 694 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.7E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.7E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.7E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.7E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 Pfam PF03764 Elongation factor G, domain IV 475 593 2.7E-43 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 SUPERFAMILY SSF50447 261 398 3.98E-31 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_11110 896640591db7b2508ccdcdaf78e13586 694 Gene3D G3DSA:3.40.50.300 2 290 4.1E-101 T 13-10-2018 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 174 1.9E-24 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 SMART SM00889 476 594 6.7E-61 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ambt_11110 896640591db7b2508ccdcdaf78e13586 694 SMART SM00838 596 683 3.6E-46 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like ambt_12430 990ae8891d3162dad3eb9729290f24ea 266 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 11 266 39.33 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 ambt_12430 990ae8891d3162dad3eb9729290f24ea 266 Pfam PF00459 Inositol monophosphatase family 13 248 4.8E-47 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_12430 990ae8891d3162dad3eb9729290f24ea 266 Gene3D G3DSA:3.40.190.80 157 266 8.1E-33 T 13-10-2018 ambt_12430 990ae8891d3162dad3eb9729290f24ea 266 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 12 265 2.8E-87 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 ambt_12430 990ae8891d3162dad3eb9729290f24ea 266 SUPERFAMILY SSF56655 10 253 6.54E-67 T 13-10-2018 ambt_12430 990ae8891d3162dad3eb9729290f24ea 266 Gene3D G3DSA:3.30.540.10 6 156 1.1E-47 T 13-10-2018 ambt_12430 990ae8891d3162dad3eb9729290f24ea 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 88 101 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site ambt_16675 4af6c7629baaedba21f9fb45f002fc51 292 SUPERFAMILY SSF103481 190 289 4.45E-7 T 13-10-2018 ambt_16675 4af6c7629baaedba21f9fb45f002fc51 292 Pfam PF00892 EamA-like transporter family 1 132 2.4E-21 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_16675 4af6c7629baaedba21f9fb45f002fc51 292 Pfam PF00892 EamA-like transporter family 148 286 4.2E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_16675 4af6c7629baaedba21f9fb45f002fc51 292 SUPERFAMILY SSF103481 41 138 2.35E-13 T 13-10-2018 ambt_11200 089ed8eb0ac9f03302d99bf2dc8e500a 210 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 10 98 3.0E-32 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ambt_11200 089ed8eb0ac9f03302d99bf2dc8e500a 210 Gene3D G3DSA:2.40.240.10 5 98 5.2E-34 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ambt_11200 089ed8eb0ac9f03302d99bf2dc8e500a 210 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 175 2.1E-45 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ambt_11200 089ed8eb0ac9f03302d99bf2dc8e500a 210 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 192 3.4E-29 T 13-10-2018 IPR020057 Ribosomal protein L25, beta domain ambt_11200 089ed8eb0ac9f03302d99bf2dc8e500a 210 Pfam PF01386 Ribosomal L25p family 8 95 4.3E-27 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ambt_11200 089ed8eb0ac9f03302d99bf2dc8e500a 210 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 6 191 30.474 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ambt_11200 089ed8eb0ac9f03302d99bf2dc8e500a 210 Gene3D G3DSA:2.170.120.20 101 200 2.6E-26 T 13-10-2018 IPR037121 Ribosomal protein L25, C-terminal ambt_11200 089ed8eb0ac9f03302d99bf2dc8e500a 210 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 6 98 25.375 T 13-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ambt_11200 089ed8eb0ac9f03302d99bf2dc8e500a 210 SUPERFAMILY SSF50715 5 200 4.19E-56 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ambt_06615 82284b0a1bc14a9facf357f699f77d9b 504 SUPERFAMILY SSF51735 8 291 8.27E-99 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_06615 82284b0a1bc14a9facf357f699f77d9b 504 Gene3D G3DSA:1.10.1040.10 291 495 1.4E-57 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ambt_06615 82284b0a1bc14a9facf357f699f77d9b 504 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 34 198 7.2E-42 T 13-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_06615 82284b0a1bc14a9facf357f699f77d9b 504 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 226 466 4.0E-70 T 13-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 ambt_06615 82284b0a1bc14a9facf357f699f77d9b 504 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 228 240 - T 13-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ambt_06615 82284b0a1bc14a9facf357f699f77d9b 504 PRINTS PR00084 Mannitol dehydrogenase signature 257 272 2.6E-20 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ambt_06615 82284b0a1bc14a9facf357f699f77d9b 504 PRINTS PR00084 Mannitol dehydrogenase signature 228 241 2.6E-20 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ambt_06615 82284b0a1bc14a9facf357f699f77d9b 504 PRINTS PR00084 Mannitol dehydrogenase signature 189 202 2.6E-20 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ambt_06615 82284b0a1bc14a9facf357f699f77d9b 504 PRINTS PR00084 Mannitol dehydrogenase signature 35 45 2.6E-20 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ambt_06615 82284b0a1bc14a9facf357f699f77d9b 504 SUPERFAMILY SSF48179 292 484 1.39E-51 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_06615 82284b0a1bc14a9facf357f699f77d9b 504 Gene3D G3DSA:3.40.50.720 7 290 5.4E-114 T 13-10-2018 ambt_05190 d7009a3ca3f13a6bdc5e0caa9b97b97d 163 PIRSF PIRSF001467 1 163 3.3E-29 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 ambt_05190 d7009a3ca3f13a6bdc5e0caa9b97b97d 163 SUPERFAMILY SSF50891 1 161 2.05E-61 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily ambt_05190 d7009a3ca3f13a6bdc5e0caa9b97b97d 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 160 1.2E-49 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ambt_05190 d7009a3ca3f13a6bdc5e0caa9b97b97d 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 ambt_05190 d7009a3ca3f13a6bdc5e0caa9b97b97d 163 Gene3D G3DSA:2.40.100.10 1 163 4.6E-68 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily ambt_05190 d7009a3ca3f13a6bdc5e0caa9b97b97d 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.4E-14 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ambt_05190 d7009a3ca3f13a6bdc5e0caa9b97b97d 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.4E-14 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ambt_05190 d7009a3ca3f13a6bdc5e0caa9b97b97d 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.4E-14 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ambt_21435 9cec3be4b3fbc72af7e345b1c574a0a7 367 SMART SM00849 100 300 6.2E-6 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_21435 9cec3be4b3fbc72af7e345b1c574a0a7 367 SUPERFAMILY SSF56281 85 357 3.14E-39 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_21435 9cec3be4b3fbc72af7e345b1c574a0a7 367 Pfam PF12706 Beta-lactamase superfamily domain 113 323 4.3E-20 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_21435 9cec3be4b3fbc72af7e345b1c574a0a7 367 Gene3D G3DSA:3.60.15.10 84 364 7.0E-47 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_17255 492ac364a896a3ab0270f9d1cdc85648 494 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 490 1.5E-218 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 ambt_17255 492ac364a896a3ab0270f9d1cdc85648 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 8.2E-77 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 ambt_17255 492ac364a896a3ab0270f9d1cdc85648 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 448 7.1E-58 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 ambt_17255 492ac364a896a3ab0270f9d1cdc85648 494 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ambt_17255 492ac364a896a3ab0270f9d1cdc85648 494 PIRSF PIRSF000538 2 493 4.2E-169 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ambt_17255 492ac364a896a3ab0270f9d1cdc85648 494 Gene3D G3DSA:3.30.420.40 253 492 1.2E-86 T 13-10-2018 ambt_17255 492ac364a896a3ab0270f9d1cdc85648 494 SUPERFAMILY SSF53067 4 254 3.42E-92 T 13-10-2018 ambt_17255 492ac364a896a3ab0270f9d1cdc85648 494 Hamap MF_00186 Glycerol kinase [glpK]. 2 494 53.114 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 ambt_17255 492ac364a896a3ab0270f9d1cdc85648 494 SUPERFAMILY SSF53067 254 491 2.38E-78 T 13-10-2018 ambt_17255 492ac364a896a3ab0270f9d1cdc85648 494 Gene3D G3DSA:3.30.420.40 1 252 4.3E-104 T 13-10-2018 ambt_03345 4fe84fe88716b38bb30338181f2f5ebd 721 Gene3D G3DSA:2.170.130.10 49 174 1.3E-31 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_03345 4fe84fe88716b38bb30338181f2f5ebd 721 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 704 721 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site ambt_03345 4fe84fe88716b38bb30338181f2f5ebd 721 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 73 721 2.7E-92 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ambt_03345 4fe84fe88716b38bb30338181f2f5ebd 721 Pfam PF00593 TonB dependent receptor 251 720 6.9E-48 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_03345 4fe84fe88716b38bb30338181f2f5ebd 721 SUPERFAMILY SSF56935 35 721 1.21E-118 T 13-10-2018 ambt_03345 4fe84fe88716b38bb30338181f2f5ebd 721 Gene3D G3DSA:2.40.170.20 175 721 3.0E-105 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_03345 4fe84fe88716b38bb30338181f2f5ebd 721 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 165 1.8E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_10810 d21f1485a2287770cb3357d0e308348a 334 Pfam PF00962 Adenosine/AMP deaminase 10 325 1.4E-69 T 13-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 ambt_10810 d21f1485a2287770cb3357d0e308348a 334 Hamap MF_01962 Adenine deaminase. 6 318 80.661 T 13-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 ambt_10810 d21f1485a2287770cb3357d0e308348a 334 Gene3D G3DSA:3.20.20.140 2 334 1.4E-103 T 13-10-2018 ambt_10810 d21f1485a2287770cb3357d0e308348a 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 10 329 2.0E-110 T 13-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 ambt_10810 d21f1485a2287770cb3357d0e308348a 334 SUPERFAMILY SSF51556 6 326 2.4E-88 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_00450 955d4d9ee4f448c96f47f78e76314c53 400 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 399 35.758 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 ambt_00450 955d4d9ee4f448c96f47f78e76314c53 400 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 395 6.2E-172 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 ambt_00450 955d4d9ee4f448c96f47f78e76314c53 400 PIRSF PIRSF016055 1 400 3.7E-193 T 13-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 ambt_00450 955d4d9ee4f448c96f47f78e76314c53 400 Pfam PF03116 NQR2, RnfD, RnfE family 42 392 1.0E-105 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 ambt_12215 202270b7e557b7cc987d6955a6198b25 209 Pfam PF03458 UPF0126 domain 94 166 1.5E-17 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 ambt_12215 202270b7e557b7cc987d6955a6198b25 209 Pfam PF03458 UPF0126 domain 8 79 7.4E-18 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 ambt_22195 df335e16b2d0c974c680b3809531c9e3 264 SUPERFAMILY SSF52540 2 257 5.15E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_22195 df335e16b2d0c974c680b3809531c9e3 264 Gene3D G3DSA:3.40.50.300 1 261 4.6E-77 T 13-10-2018 ambt_22195 df335e16b2d0c974c680b3809531c9e3 264 PIRSF PIRSF009320 98 261 8.0E-8 T 13-10-2018 ambt_22195 df335e16b2d0c974c680b3809531c9e3 264 PIRSF PIRSF009320 2 96 1.3E-14 T 13-10-2018 ambt_22195 df335e16b2d0c974c680b3809531c9e3 264 Pfam PF13614 AAA domain 3 178 1.5E-62 T 13-10-2018 IPR025669 AAA domain ambt_03825 f2bc91431d18a7a87465ba9989aa4606 179 Pfam PF13689 Domain of unknown function (DUF4154) 31 170 2.4E-28 T 13-10-2018 IPR025293 YfiR-like ambt_09210 bfdcb86072eaeeeb24700c5be10b41ec 234 Gene3D G3DSA:3.30.1360.40 8 90 4.5E-14 T 13-10-2018 ambt_09210 bfdcb86072eaeeeb24700c5be10b41ec 234 SMART SM00796 8 212 3.3E-54 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D ambt_09210 bfdcb86072eaeeeb24700c5be10b41ec 234 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 9 208 1.9E-54 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D ambt_09210 bfdcb86072eaeeeb24700c5be10b41ec 234 SUPERFAMILY SSF50891 100 228 7.59E-38 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily ambt_09210 bfdcb86072eaeeeb24700c5be10b41ec 234 SUPERFAMILY SSF160467 10 105 3.92E-13 T 13-10-2018 ambt_09210 bfdcb86072eaeeeb24700c5be10b41ec 234 Gene3D G3DSA:2.40.100.10 99 234 7.4E-49 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily ambt_13485 73dbd83dee966f10a425ad0f0b83b971 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ambt_13485 73dbd83dee966f10a425ad0f0b83b971 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 1.6E-24 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ambt_13485 73dbd83dee966f10a425ad0f0b83b971 262 Pfam PF00460 Flagella basal body rod protein 5 35 8.1E-11 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ambt_13485 73dbd83dee966f10a425ad0f0b83b971 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 3.7E-109 T 13-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 ambt_13485 73dbd83dee966f10a425ad0f0b83b971 262 SUPERFAMILY SSF117143 93 223 2.09E-32 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ambt_13485 73dbd83dee966f10a425ad0f0b83b971 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 1.8E-39 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ambt_13485 73dbd83dee966f10a425ad0f0b83b971 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 148 244 1.4E-28 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 Pfam PF00072 Response regulator receiver domain 32 149 4.9E-5 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 Pfam PF00563 EAL domain 493 727 2.8E-66 T 13-10-2018 IPR001633 EAL domain ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 Gene3D G3DSA:3.30.70.270 319 489 3.7E-28 T 13-10-2018 ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 Gene3D G3DSA:3.40.50.2300 23 170 1.4E-13 T 13-10-2018 ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 SUPERFAMILY SSF55073 330 477 2.51E-21 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 Pfam PF11849 Domain of unknown function (DUF3369) 153 321 7.6E-53 T 13-10-2018 IPR021800 Domain of unknown function DUF3369 ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 322 473 3.7E-13 T 13-10-2018 IPR000160 GGDEF domain ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 Gene3D G3DSA:3.20.20.450 490 740 6.8E-88 T 13-10-2018 IPR035919 EAL domain superfamily ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 SUPERFAMILY SSF141868 493 739 3.4E-82 T 13-10-2018 IPR035919 EAL domain superfamily ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 Pfam PF00990 Diguanylate cyclase, GGDEF domain 325 469 1.7E-18 T 13-10-2018 IPR000160 GGDEF domain ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 SUPERFAMILY SSF52172 28 163 1.85E-11 T 13-10-2018 IPR011006 CheY-like superfamily ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 SMART SM00267 314 477 1.3E-12 T 13-10-2018 IPR000160 GGDEF domain ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 SMART SM00052 483 732 8.1E-97 T 13-10-2018 IPR001633 EAL domain ambt_00765 09b3f8dfddc7bb7d3029a29b7863da18 744 SMART SM00448 30 153 0.0099 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_21775 22c29c1c1ce213e7c7ece81221b6aec7 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 609 8.6E-258 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ambt_21775 22c29c1c1ce213e7c7ece81221b6aec7 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 609 45.122 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ambt_21775 22c29c1c1ce213e7c7ece81221b6aec7 616 Pfam PF00920 Dehydratase family 34 606 7.4E-218 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ambt_21775 22c29c1c1ce213e7c7ece81221b6aec7 616 SUPERFAMILY SSF143975 3 420 2.48E-135 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ambt_21775 22c29c1c1ce213e7c7ece81221b6aec7 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ambt_21775 22c29c1c1ce213e7c7ece81221b6aec7 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ambt_21775 22c29c1c1ce213e7c7ece81221b6aec7 616 SUPERFAMILY SSF52016 421 611 8.63E-59 T 13-10-2018 ambt_21775 22c29c1c1ce213e7c7ece81221b6aec7 616 Gene3D G3DSA:3.50.30.80 421 572 2.0E-52 T 13-10-2018 ambt_09420 e6e9f9d4ea2be98fbc2dc4a4250d8387 415 Pfam PF00171 Aldehyde dehydrogenase family 6 286 1.2E-16 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_09420 e6e9f9d4ea2be98fbc2dc4a4250d8387 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 38.467 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ambt_09420 e6e9f9d4ea2be98fbc2dc4a4250d8387 415 Gene3D G3DSA:3.40.605.10 10 411 1.6E-148 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_09420 e6e9f9d4ea2be98fbc2dc4a4250d8387 415 PIRSF PIRSF000151 1 415 1.2E-161 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ambt_09420 e6e9f9d4ea2be98fbc2dc4a4250d8387 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 13-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ambt_09420 e6e9f9d4ea2be98fbc2dc4a4250d8387 415 SUPERFAMILY SSF53720 4 414 2.23E-111 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_09420 e6e9f9d4ea2be98fbc2dc4a4250d8387 415 Gene3D G3DSA:3.40.309.10 224 372 1.6E-148 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ambt_09420 e6e9f9d4ea2be98fbc2dc4a4250d8387 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 5.2E-134 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ambt_18670 537c3c2788638e301d3a4029288b9c9a 398 Gene3D G3DSA:3.40.640.10 58 296 7.0E-134 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_18670 537c3c2788638e301d3a4029288b9c9a 398 Pfam PF00155 Aminotransferase class I and II 43 386 2.7E-74 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ambt_18670 537c3c2788638e301d3a4029288b9c9a 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.756 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 ambt_18670 537c3c2788638e301d3a4029288b9c9a 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ambt_18670 537c3c2788638e301d3a4029288b9c9a 398 Gene3D G3DSA:3.90.1150.10 38 387 7.0E-134 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_18670 537c3c2788638e301d3a4029288b9c9a 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 7 397 2.1E-213 T 13-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 ambt_18670 537c3c2788638e301d3a4029288b9c9a 398 SUPERFAMILY SSF53383 5 396 5.13E-121 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 SMART SM00052 535 783 5.5E-98 T 13-10-2018 IPR001633 EAL domain ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 Pfam PF00989 PAS fold 236 342 2.9E-7 T 13-10-2018 IPR013767 PAS fold GO:0006355 ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 Gene3D G3DSA:3.20.20.450 537 798 5.2E-90 T 13-10-2018 IPR035919 EAL domain superfamily ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 231 351 1.7E-5 T 13-10-2018 IPR000014 PAS domain ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 Gene3D G3DSA:3.30.450.20 231 346 1.9E-11 T 13-10-2018 ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 Pfam PF00990 Diguanylate cyclase, GGDEF domain 357 521 3.0E-34 T 13-10-2018 IPR000160 GGDEF domain ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 Gene3D G3DSA:3.30.70.270 351 536 3.6E-45 T 13-10-2018 ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 SMART SM00267 346 525 1.5E-40 T 13-10-2018 IPR000160 GGDEF domain ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 Pfam PF00563 EAL domain 542 778 7.3E-66 T 13-10-2018 IPR001633 EAL domain ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 SUPERFAMILY SSF141868 541 791 1.57E-82 T 13-10-2018 IPR035919 EAL domain superfamily ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 355 523 1.8E-29 T 13-10-2018 IPR000160 GGDEF domain ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 SUPERFAMILY SSF55073 362 527 1.22E-38 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_11185 7393c5f70dadd46a1d45d7f80c5a10d4 799 SUPERFAMILY SSF55785 236 345 4.54E-12 T 13-10-2018 IPR035965 PAS domain superfamily ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 SUPERFAMILY SSF53732 403 914 1.57E-74 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 Gene3D G3DSA:3.20.19.10 169 385 6.0E-33 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 Gene3D G3DSA:3.30.499.10 732 820 2.1E-9 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 Gene3D G3DSA:3.30.499.10 833 925 4.0E-18 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 Pfam PF00330 Aconitase family (aconitate hydratase) 410 894 1.8E-63 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 Pfam PF11791 Aconitate B N-terminal domain 7 163 1.2E-40 T 13-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 Gene3D G3DSA:3.30.499.10 430 567 5.4E-114 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 SUPERFAMILY SSF74778 3 167 3.79E-41 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 SUPERFAMILY SSF52016 169 394 1.51E-31 T 13-10-2018 ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 Gene3D G3DSA:1.25.40.310 3 168 4.4E-48 T 13-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 Pfam PF06434 Aconitate hydratase 2 N-terminus 177 406 1.1E-60 T 13-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ambt_14840 8814752e9acb1babd3bc4f8d825f8609 937 Gene3D G3DSA:3.40.1060.10 424 717 5.4E-114 T 13-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ambt_20940 c15f655634d87fb4cca77640f08847d5 621 SUPERFAMILY SSF52540 83 586 4.46E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20940 c15f655634d87fb4cca77640f08847d5 621 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 1 586 1.2E-202 T 13-10-2018 IPR022458 Conjugative coupling factor TraG/TraD ambt_20940 c15f655634d87fb4cca77640f08847d5 621 Gene3D G3DSA:3.40.50.300 339 591 4.2E-22 T 13-10-2018 ambt_20940 c15f655634d87fb4cca77640f08847d5 621 Gene3D G3DSA:3.40.50.300 51 258 8.4E-8 T 13-10-2018 ambt_20940 c15f655634d87fb4cca77640f08847d5 621 Pfam PF12696 TraM recognition site of TraD and TraG 441 565 3.6E-9 T 13-10-2018 IPR032689 TraD/TraG, TraM recognition site ambt_20940 c15f655634d87fb4cca77640f08847d5 621 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 1 586 2.3E-236 T 13-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 ambt_18495 8fee9c4f64abf382f5863c426693c05a 114 Gene3D G3DSA:1.20.1290.10 1 113 5.5E-35 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ambt_18495 8fee9c4f64abf382f5863c426693c05a 114 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 89 4.1E-13 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ambt_18495 8fee9c4f64abf382f5863c426693c05a 114 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 105 4.4E-21 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ambt_18495 8fee9c4f64abf382f5863c426693c05a 114 SUPERFAMILY SSF69118 5 108 2.62E-28 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ambt_04075 d61468c71289de98edf9f5ec7d7f0a13 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.9E-34 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_04075 d61468c71289de98edf9f5ec7d7f0a13 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ambt_04075 d61468c71289de98edf9f5ec7d7f0a13 90 SMART SM00411 1 90 2.5E-43 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_04075 d61468c71289de98edf9f5ec7d7f0a13 90 SUPERFAMILY SSF47729 1 90 2.06E-32 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ambt_04075 d61468c71289de98edf9f5ec7d7f0a13 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.2E-21 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_04075 d61468c71289de98edf9f5ec7d7f0a13 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.2E-21 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_04075 d61468c71289de98edf9f5ec7d7f0a13 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.2E-21 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ambt_04075 d61468c71289de98edf9f5ec7d7f0a13 90 Gene3D G3DSA:4.10.520.10 1 90 4.2E-36 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ambt_17020 ea5aff03c7997e2e3deedad309edc389 182 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ambt_17020 ea5aff03c7997e2e3deedad309edc389 182 Pfam PF00239 Resolvase, N terminal domain 3 136 1.0E-42 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ambt_17020 ea5aff03c7997e2e3deedad309edc389 182 SUPERFAMILY SSF46689 138 179 5.73E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_17020 ea5aff03c7997e2e3deedad309edc389 182 Gene3D G3DSA:3.40.50.1390 1 125 2.4E-46 T 13-10-2018 ambt_17020 ea5aff03c7997e2e3deedad309edc389 182 SUPERFAMILY SSF53041 1 135 1.44E-44 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ambt_17020 ea5aff03c7997e2e3deedad309edc389 182 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ambt_17020 ea5aff03c7997e2e3deedad309edc389 182 Pfam PF02796 Helix-turn-helix domain of resolvase 138 180 8.2E-6 T 13-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 ambt_17020 ea5aff03c7997e2e3deedad309edc389 182 SMART SM00857 2 136 2.2E-55 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ambt_10230 0090a65a369791f340cb7fccbd6c1e2d 139 Pfam PF00571 CBS domain 73 128 2.0E-9 T 13-10-2018 IPR000644 CBS domain ambt_10230 0090a65a369791f340cb7fccbd6c1e2d 139 Pfam PF00571 CBS domain 6 57 2.5E-5 T 13-10-2018 IPR000644 CBS domain ambt_10230 0090a65a369791f340cb7fccbd6c1e2d 139 SUPERFAMILY SSF54631 1 127 4.04E-29 T 13-10-2018 ambt_10230 0090a65a369791f340cb7fccbd6c1e2d 139 SMART SM00116 13 61 2.1 T 13-10-2018 IPR000644 CBS domain ambt_10230 0090a65a369791f340cb7fccbd6c1e2d 139 SMART SM00116 80 128 0.0015 T 13-10-2018 IPR000644 CBS domain ambt_10230 0090a65a369791f340cb7fccbd6c1e2d 139 Gene3D G3DSA:3.10.580.10 1 128 4.2E-26 T 13-10-2018 ambt_14775 5ebd4214952fcec22d479f79f122fb78 305 Gene3D G3DSA:1.10.443.10 120 298 6.5E-70 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_14775 5ebd4214952fcec22d479f79f122fb78 305 Gene3D G3DSA:1.10.150.130 12 108 1.9E-22 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_14775 5ebd4214952fcec22d479f79f122fb78 305 Pfam PF00589 Phage integrase family 122 291 6.8E-55 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_14775 5ebd4214952fcec22d479f79f122fb78 305 SUPERFAMILY SSF56349 23 295 8.54E-60 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_14775 5ebd4214952fcec22d479f79f122fb78 305 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 18 304 2.0E-114 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ambt_14775 5ebd4214952fcec22d479f79f122fb78 305 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 12 305 56.023 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ambt_14775 5ebd4214952fcec22d479f79f122fb78 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 96 2.1E-22 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ambt_14775 5ebd4214952fcec22d479f79f122fb78 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 14 305 54.581 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD ambt_12610 701314dd0718f2f6c29358b21f41909d 1004 Gene3D G3DSA:3.55.50.30 67 140 1.0E-15 T 13-10-2018 ambt_12610 701314dd0718f2f6c29358b21f41909d 1004 Pfam PF00593 TonB dependent receptor 476 1002 1.1E-35 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_12610 701314dd0718f2f6c29358b21f41909d 1004 Pfam PF07715 TonB-dependent Receptor Plug Domain 183 304 3.2E-18 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_12610 701314dd0718f2f6c29358b21f41909d 1004 Gene3D G3DSA:2.40.170.20 502 979 1.5E-46 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_12610 701314dd0718f2f6c29358b21f41909d 1004 SUPERFAMILY SSF56935 168 1001 3.66E-89 T 13-10-2018 ambt_12610 701314dd0718f2f6c29358b21f41909d 1004 SMART SM00965 91 142 4.9E-5 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ambt_12610 701314dd0718f2f6c29358b21f41909d 1004 Gene3D G3DSA:2.170.130.10 163 308 9.6E-28 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_16725 5aea0d791da3e73c4e6562f6eda07dbc 210 SUPERFAMILY SSF64438 20 170 3.2E-45 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic ambt_16725 5aea0d791da3e73c4e6562f6eda07dbc 210 Pfam PF03975 CheD chemotactic sensory transduction 62 166 6.6E-27 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 ambt_16725 5aea0d791da3e73c4e6562f6eda07dbc 210 Gene3D G3DSA:3.30.1330.200 17 177 1.1E-46 T 13-10-2018 IPR038592 CheD-like superfamily ambt_16725 5aea0d791da3e73c4e6562f6eda07dbc 210 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 15 170 27.294 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 ambt_09365 64b0a59c92614dd8a5bcd70230d43862 219 Pfam PF06912 Protein of unknown function (DUF1275) 13 209 9.5E-31 T 13-10-2018 IPR010699 Protein of unknown function DUF1275 ambt_09145 72e2dd816ffb70d2644ca9ed2b74e62e 133 PIRSF PIRSF002096 1 131 2.6E-41 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 ambt_09145 72e2dd816ffb70d2644ca9ed2b74e62e 133 Gene3D G3DSA:1.10.287.1050 1 81 2.7E-16 T 13-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 ambt_09145 72e2dd816ffb70d2644ca9ed2b74e62e 133 Pfam PF00816 H-NS histone family 35 125 2.3E-14 T 13-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 ambt_09145 72e2dd816ffb70d2644ca9ed2b74e62e 133 SUPERFAMILY SSF81273 88 131 4.71E-9 T 13-10-2018 ambt_09145 72e2dd816ffb70d2644ca9ed2b74e62e 133 Gene3D G3DSA:4.10.430.10 88 132 6.5E-17 T 13-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 ambt_09145 72e2dd816ffb70d2644ca9ed2b74e62e 133 SUPERFAMILY SSF81273 2 58 3.34E-11 T 13-10-2018 ambt_09145 72e2dd816ffb70d2644ca9ed2b74e62e 133 SMART SM00528 84 131 4.4E-10 T 13-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 SMART SM00342 108 192 5.1E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 Gene3D G3DSA:1.10.340.30 319 426 1.2E-17 T 13-10-2018 ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 Gene3D G3DSA:3.30.310.20 203 318 4.9E-25 T 13-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 Pfam PF12833 Helix-turn-helix domain 116 193 1.5E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 Pfam PF02805 Metal binding domain of Ada 20 82 2.2E-28 T 13-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 Gene3D G3DSA:1.10.10.60 99 198 6.8E-19 T 13-10-2018 ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 Gene3D G3DSA:3.40.10.10 10 84 2.0E-28 T 13-10-2018 IPR035451 Ada-like domain superfamily ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 SUPERFAMILY SSF55945 204 297 7.69E-21 T 13-10-2018 ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 SUPERFAMILY SSF46689 146 196 3.36E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 SMART SM01009 203 318 3.6E-23 T 13-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 SUPERFAMILY SSF48150 310 466 1.92E-23 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 Pfam PF06029 AlkA N-terminal domain 204 317 7.2E-28 T 13-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 SUPERFAMILY SSF57884 15 97 6.54E-32 T 13-10-2018 IPR035451 Ada-like domain superfamily ambt_20565 24b04e0f0392b3f2553e16982e55e050 470 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 146 188 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 Gene3D G3DSA:3.90.580.10 1 101 2.6E-39 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 SMART SM00493 262 333 5.1E-20 T 13-10-2018 IPR006171 TOPRIM domain ambt_15010 9116dfce9ab9fd59882b757c49373719 593 Gene3D G3DSA:1.20.50.20 371 428 8.9E-9 T 13-10-2018 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 Hamap MF_00974 DNA primase [dnaG]. 4 591 29.125 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 SUPERFAMILY SSF57783 5 100 1.12E-37 T 13-10-2018 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 Pfam PF10410 DnaB-helicase binding domain of primase 372 423 4.5E-7 T 13-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 255 3.2E-44 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal ambt_15010 9116dfce9ab9fd59882b757c49373719 593 SUPERFAMILY SSF117023 458 590 2.35E-31 T 13-10-2018 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 TIGRFAM TIGR01391 dnaG: DNA primase 5 421 5.3E-151 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 Gene3D G3DSA:3.40.1360.10 244 370 4.1E-41 T 13-10-2018 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 Pfam PF08278 DNA primase DnaG DnaB-binding 462 586 9.3E-27 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 Gene3D G3DSA:3.90.980.10 118 243 2.0E-46 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily ambt_15010 9116dfce9ab9fd59882b757c49373719 593 SMART SM00400 36 90 2.5E-38 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 Gene3D G3DSA:1.10.860.10 445 593 2.3E-31 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ambt_15010 9116dfce9ab9fd59882b757c49373719 593 Pfam PF01807 CHC2 zinc finger 6 101 9.8E-42 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 SUPERFAMILY SSF56731 119 428 6.28E-109 T 13-10-2018 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 SMART SM00766 460 587 1.2E-26 T 13-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 PIRSF PIRSF002811 2 593 6.3E-148 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ambt_15010 9116dfce9ab9fd59882b757c49373719 593 Pfam PF13155 Toprim-like 266 351 3.0E-13 T 13-10-2018 ambt_08445 841956e6ce3670e483d2016d65edff0a 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 238 2.1E-21 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ambt_08445 841956e6ce3670e483d2016d65edff0a 272 SUPERFAMILY SSF56784 3 269 2.01E-52 T 13-10-2018 IPR036412 HAD-like superfamily ambt_08445 841956e6ce3670e483d2016d65edff0a 272 Gene3D G3DSA:3.40.50.1000 3 266 2.5E-50 T 13-10-2018 IPR023214 HAD superfamily ambt_08445 841956e6ce3670e483d2016d65edff0a 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 266 1.6E-42 T 13-10-2018 IPR000150 Cof family GO:0016787 ambt_08445 841956e6ce3670e483d2016d65edff0a 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 13-10-2018 ambt_08445 841956e6ce3670e483d2016d65edff0a 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 220 242 - T 13-10-2018 ambt_08445 841956e6ce3670e483d2016d65edff0a 272 Gene3D G3DSA:3.30.1240.10 82 197 2.5E-50 T 13-10-2018 ambt_08445 841956e6ce3670e483d2016d65edff0a 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 266 1.8E-44 T 13-10-2018 ambt_03975 df0b9c9d668917dd62f7e42647168396 426 Gene3D G3DSA:3.40.50.800 327 424 1.7E-23 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily ambt_03975 df0b9c9d668917dd62f7e42647168396 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 426 33.386 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ambt_03975 df0b9c9d668917dd62f7e42647168396 426 Pfam PF13393 Histidyl-tRNA synthetase 10 312 3.5E-49 T 13-10-2018 ambt_03975 df0b9c9d668917dd62f7e42647168396 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 7.5E-158 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ambt_03975 df0b9c9d668917dd62f7e42647168396 426 SUPERFAMILY SSF52954 328 424 1.21E-23 T 13-10-2018 ambt_03975 df0b9c9d668917dd62f7e42647168396 426 SUPERFAMILY SSF55681 5 319 6.17E-104 T 13-10-2018 ambt_03975 df0b9c9d668917dd62f7e42647168396 426 PIRSF PIRSF001549 2 423 1.6E-123 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 ambt_03975 df0b9c9d668917dd62f7e42647168396 426 Gene3D G3DSA:3.30.930.10 2 322 1.2E-118 T 13-10-2018 ambt_03975 df0b9c9d668917dd62f7e42647168396 426 Pfam PF03129 Anticodon binding domain 330 421 1.0E-10 T 13-10-2018 IPR004154 Anticodon-binding ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 Gene3D G3DSA:1.20.59.20 242 324 1.8E-18 T 13-10-2018 ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 Pfam PF01171 PP-loop family 27 206 1.4E-52 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 SUPERFAMILY SSF52402 27 236 5.29E-55 T 13-10-2018 ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 316 22.273 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 27 209 2.0E-51 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 364 407 1.5E-8 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 SUPERFAMILY SSF56037 360 413 4.97E-11 T 13-10-2018 ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 Pfam PF11734 TilS substrate C-terminal domain 363 413 6.4E-12 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 SMART SM00977 362 421 3.5E-7 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 Gene3D G3DSA:3.40.50.620 17 239 3.2E-64 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 Pfam PF09179 TilS substrate binding domain 257 320 1.2E-15 T 13-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ambt_13625 b33d5add2f4cd461664bf409860ceae6 437 SUPERFAMILY SSF82829 244 324 7.32E-18 T 13-10-2018 ambt_18145 6e654ea73535c5c556cb6d240f5e7b4e 204 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 10 197 1.7E-75 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ambt_18145 6e654ea73535c5c556cb6d240f5e7b4e 204 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 6 200 42.006 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ambt_18145 6e654ea73535c5c556cb6d240f5e7b4e 204 Gene3D G3DSA:3.40.50.10990 7 177 1.2E-70 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ambt_18145 6e654ea73535c5c556cb6d240f5e7b4e 204 Pfam PF00925 GTP cyclohydrolase II 12 173 2.3E-65 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ambt_18145 6e654ea73535c5c556cb6d240f5e7b4e 204 SUPERFAMILY SSF142695 9 175 1.29E-62 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ambt_08390 16fd43e8d9b69baa144d9ff89f974d55 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 224 3.6E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_08390 16fd43e8d9b69baa144d9ff89f974d55 229 Gene3D G3DSA:3.40.50.2300 1 123 2.1E-35 T 13-10-2018 ambt_08390 16fd43e8d9b69baa144d9ff89f974d55 229 SUPERFAMILY SSF46894 133 224 5.44E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_08390 16fd43e8d9b69baa144d9ff89f974d55 229 SUPERFAMILY SSF52172 3 164 1.85E-37 T 13-10-2018 IPR011006 CheY-like superfamily ambt_08390 16fd43e8d9b69baa144d9ff89f974d55 229 Gene3D G3DSA:1.10.10.10 124 226 3.1E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_08390 16fd43e8d9b69baa144d9ff89f974d55 229 SMART SM00448 5 117 8.9E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_08390 16fd43e8d9b69baa144d9ff89f974d55 229 SMART SM00862 150 224 1.0E-12 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_08390 16fd43e8d9b69baa144d9ff89f974d55 229 Pfam PF00072 Response regulator receiver domain 7 115 8.6E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_20900 774c7c381a74de70251f9fa5d243f8a6 475 Pfam PF02321 Outer membrane efflux protein 80 265 6.4E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_20900 774c7c381a74de70251f9fa5d243f8a6 475 Pfam PF02321 Outer membrane efflux protein 291 471 4.2E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_20900 774c7c381a74de70251f9fa5d243f8a6 475 SUPERFAMILY SSF56954 14 473 1.83E-97 T 13-10-2018 ambt_20900 774c7c381a74de70251f9fa5d243f8a6 475 Gene3D G3DSA:1.20.1600.10 69 473 7.8E-109 T 13-10-2018 ambt_20900 774c7c381a74de70251f9fa5d243f8a6 475 Gene3D G3DSA:2.20.200.10 117 363 7.8E-109 T 13-10-2018 ambt_20900 774c7c381a74de70251f9fa5d243f8a6 475 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 37 473 4.5E-91 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 ambt_14935 edf6a9f87c2eba3235acd6347c4c54a3 578 SMART SM00387 463 575 9.6E-15 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_14935 edf6a9f87c2eba3235acd6347c4c54a3 578 Gene3D G3DSA:1.10.287.130 313 415 7.3E-16 T 13-10-2018 ambt_14935 edf6a9f87c2eba3235acd6347c4c54a3 578 SUPERFAMILY SSF55874 424 573 6.16E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_14935 edf6a9f87c2eba3235acd6347c4c54a3 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 552 5.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14935 edf6a9f87c2eba3235acd6347c4c54a3 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 531 5.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14935 edf6a9f87c2eba3235acd6347c4c54a3 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 517 5.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14935 edf6a9f87c2eba3235acd6347c4c54a3 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 572 5.4E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14935 edf6a9f87c2eba3235acd6347c4c54a3 578 Gene3D G3DSA:3.30.565.10 423 577 2.2E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_14935 edf6a9f87c2eba3235acd6347c4c54a3 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 467 573 7.9E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_20595 0d5e972c1deed4d1fafeb55c3a7b45fc 385 SUPERFAMILY SSF52283 11 176 1.02E-41 T 13-10-2018 ambt_20595 0d5e972c1deed4d1fafeb55c3a7b45fc 385 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 178 203 - T 13-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 ambt_20595 0d5e972c1deed4d1fafeb55c3a7b45fc 385 SMART SM01003 10 145 5.9E-44 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ambt_20595 0d5e972c1deed4d1fafeb55c3a7b45fc 385 SUPERFAMILY SSF51735 145 322 1.75E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_20595 0d5e972c1deed4d1fafeb55c3a7b45fc 385 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 16 145 3.4E-35 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ambt_20595 0d5e972c1deed4d1fafeb55c3a7b45fc 385 Gene3D G3DSA:3.40.50.720 16 371 2.0E-125 T 13-10-2018 ambt_20595 0d5e972c1deed4d1fafeb55c3a7b45fc 385 SMART SM01002 154 318 7.8E-72 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ambt_20595 0d5e972c1deed4d1fafeb55c3a7b45fc 385 Gene3D G3DSA:3.40.50.720 145 325 2.0E-125 T 13-10-2018 ambt_20595 0d5e972c1deed4d1fafeb55c3a7b45fc 385 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 150 375 6.6E-63 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ambt_10995 a859ebf736e7a90b800b33901f334f4f 360 SUPERFAMILY SSF52151 33 325 1.83E-13 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ambt_18525 1fc447ea721ba92a6382cad9c941d024 930 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_18525 1fc447ea721ba92a6382cad9c941d024 930 Gene3D G3DSA:3.40.50.300 268 576 1.3E-62 T 13-10-2018 ambt_18525 1fc447ea721ba92a6382cad9c941d024 930 SUPERFAMILY SSF52540 4 231 6.8E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_18525 1fc447ea721ba92a6382cad9c941d024 930 Pfam PF00005 ABC transporter 285 433 1.2E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_18525 1fc447ea721ba92a6382cad9c941d024 930 Pfam PF12698 ABC-2 family transporter protein 588 922 1.4E-38 T 13-10-2018 ambt_18525 1fc447ea721ba92a6382cad9c941d024 930 SMART SM00382 294 489 2.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_18525 1fc447ea721ba92a6382cad9c941d024 930 SMART SM00382 29 217 2.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_18525 1fc447ea721ba92a6382cad9c941d024 930 SUPERFAMILY SSF52540 264 496 1.05E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_18525 1fc447ea721ba92a6382cad9c941d024 930 Pfam PF00005 ABC transporter 22 167 3.6E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_18525 1fc447ea721ba92a6382cad9c941d024 930 Gene3D G3DSA:3.40.50.300 1 248 9.0E-60 T 13-10-2018 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 SUPERFAMILY SSF82866 326 506 8.5E-29 T 13-10-2018 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 SUPERFAMILY SSF82714 728 799 1.57E-9 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 SUPERFAMILY SSF82693 51 143 3.66E-15 T 13-10-2018 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 SUPERFAMILY SSF82866 821 1044 3.4E-33 T 13-10-2018 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 Gene3D G3DSA:3.30.2090.10 729 824 4.9E-212 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 Gene3D G3DSA:1.20.1640.10 21 523 4.9E-212 T 13-10-2018 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 Gene3D G3DSA:3.30.70.1320 148 340 4.9E-212 T 13-10-2018 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 Gene3D G3DSA:3.30.70.1440 681 879 4.9E-212 T 13-10-2018 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 Gene3D G3DSA:1.20.1640.10 524 1035 4.9E-212 T 13-10-2018 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 Gene3D G3DSA:3.30.2090.10 195 287 4.9E-212 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 PRINTS PR00702 Acriflavin resistance protein family signature 49 67 2.8E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 2.8E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 2.8E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 2.8E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 PRINTS PR00702 Acriflavin resistance protein family signature 21 45 2.8E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 PRINTS PR00702 Acriflavin resistance protein family signature 454 477 2.8E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 PRINTS PR00702 Acriflavin resistance protein family signature 561 578 2.8E-28 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 Gene3D G3DSA:3.30.70.1430 51 832 4.9E-212 T 13-10-2018 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 Gene3D G3DSA:3.30.70.1430 578 680 4.9E-212 T 13-10-2018 ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 SUPERFAMILY SSF82714 200 280 5.75E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_16285 415094cda14dd8375df1f38e5e8b4523 1048 Pfam PF00873 AcrB/AcrD/AcrF family 16 1036 1.4E-135 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_17475 56375df19794596815aa5bea6c785c42 416 Gene3D G3DSA:2.40.37.10 16 409 5.2E-146 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ambt_17475 56375df19794596815aa5bea6c785c42 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 370 2.9E-25 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ambt_17475 56375df19794596815aa5bea6c785c42 416 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 413 40.576 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_17475 56375df19794596815aa5bea6c785c42 416 SUPERFAMILY SSF51419 26 283 3.34E-81 T 13-10-2018 IPR029066 PLP-binding barrel ambt_17475 56375df19794596815aa5bea6c785c42 416 Gene3D G3DSA:3.20.20.10 34 276 5.2E-146 T 13-10-2018 IPR029066 PLP-binding barrel ambt_17475 56375df19794596815aa5bea6c785c42 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 281 1.0E-73 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ambt_17475 56375df19794596815aa5bea6c785c42 416 SUPERFAMILY SSF50621 255 413 6.28E-51 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ambt_17475 56375df19794596815aa5bea6c785c42 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 3.8E-27 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_17475 56375df19794596815aa5bea6c785c42 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 3.8E-27 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_17475 56375df19794596815aa5bea6c785c42 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 3.8E-27 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_17475 56375df19794596815aa5bea6c785c42 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 271 290 3.8E-27 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_17475 56375df19794596815aa5bea6c785c42 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 3.8E-27 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_17475 56375df19794596815aa5bea6c785c42 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 1.8E-27 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_17475 56375df19794596815aa5bea6c785c42 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 1.8E-27 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_17475 56375df19794596815aa5bea6c785c42 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 1.8E-27 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_17475 56375df19794596815aa5bea6c785c42 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 299 317 1.8E-27 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_17475 56375df19794596815aa5bea6c785c42 416 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ambt_17475 56375df19794596815aa5bea6c785c42 416 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 225 241 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ambt_17475 56375df19794596815aa5bea6c785c42 416 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 412 5.0E-159 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_11025 ea6aad66c4957df4e3e6c5db84e2a2ac 111 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 1 108 4.7E-29 T 13-10-2018 IPR006504 Transcriptional regulator Spx/MgsR ambt_11025 ea6aad66c4957df4e3e6c5db84e2a2ac 111 Pfam PF03960 ArsC family 6 109 7.5E-18 T 13-10-2018 IPR006660 Arsenate reductase-like ambt_11025 ea6aad66c4957df4e3e6c5db84e2a2ac 111 Gene3D G3DSA:3.40.30.10 1 111 2.5E-39 T 13-10-2018 ambt_11025 ea6aad66c4957df4e3e6c5db84e2a2ac 111 SUPERFAMILY SSF52833 1 110 8.67E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_07080 ecb83deee1be761caca68dcce4b29bd9 236 TIGRFAM TIGR03306 altF1_A: alternate F1F0 ATPase, F0 subunit A 3 218 3.2E-112 T 13-10-2018 IPR017692 Alternate ATP synthase, F0complex, subunit A ambt_07080 ecb83deee1be761caca68dcce4b29bd9 236 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 21 216 2.2E-37 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07080 ecb83deee1be761caca68dcce4b29bd9 236 Gene3D G3DSA:1.20.120.220 73 220 1.2E-32 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07080 ecb83deee1be761caca68dcce4b29bd9 236 PRINTS PR00123 ATP synthase A subunit signature 81 97 1.5E-16 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07080 ecb83deee1be761caca68dcce4b29bd9 236 PRINTS PR00123 ATP synthase A subunit signature 201 216 1.5E-16 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07080 ecb83deee1be761caca68dcce4b29bd9 236 PRINTS PR00123 ATP synthase A subunit signature 157 179 1.5E-16 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07080 ecb83deee1be761caca68dcce4b29bd9 236 Pfam PF00119 ATP synthase A chain 23 214 2.6E-48 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07080 ecb83deee1be761caca68dcce4b29bd9 236 SUPERFAMILY SSF81336 75 214 2.09E-36 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07080 ecb83deee1be761caca68dcce4b29bd9 236 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 221 13.915 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07080 ecb83deee1be761caca68dcce4b29bd9 236 ProSitePatterns PS00449 ATP synthase a subunit signature. 160 169 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_02300 b992e50734f25b1326e0fccb21505ecb 186 SUPERFAMILY SSF55846 7 175 7.85E-62 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ambt_02300 b992e50734f25b1326e0fccb21505ecb 186 Gene3D G3DSA:3.40.80.10 2 180 1.2E-54 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ambt_02300 b992e50734f25b1326e0fccb21505ecb 186 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 163 2.2E-24 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ambt_02300 b992e50734f25b1326e0fccb21505ecb 186 SMART SM00644 12 163 5.5E-46 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ambt_05660 e21e0bc2d701f3a3240fba4eb3c19c5e 346 Gene3D G3DSA:1.10.287.470 80 116 2.2E-9 T 13-10-2018 ambt_05660 e21e0bc2d701f3a3240fba4eb3c19c5e 346 Pfam PF00529 HlyD membrane-fusion protein of T1SS 79 335 4.3E-8 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_05660 e21e0bc2d701f3a3240fba4eb3c19c5e 346 Gene3D G3DSA:2.40.30.170 228 345 3.6E-33 T 13-10-2018 ambt_05660 e21e0bc2d701f3a3240fba4eb3c19c5e 346 SUPERFAMILY SSF111369 118 178 2.75E-6 T 13-10-2018 ambt_05660 e21e0bc2d701f3a3240fba4eb3c19c5e 346 SUPERFAMILY SSF111369 182 285 5.75E-15 T 13-10-2018 ambt_05660 e21e0bc2d701f3a3240fba4eb3c19c5e 346 SUPERFAMILY SSF111369 48 115 5.89E-6 T 13-10-2018 ambt_05660 e21e0bc2d701f3a3240fba4eb3c19c5e 346 Gene3D G3DSA:1.10.287.470 117 180 3.6E-6 T 13-10-2018 ambt_05660 e21e0bc2d701f3a3240fba4eb3c19c5e 346 Gene3D G3DSA:2.40.50.100 48 79 2.2E-9 T 13-10-2018 ambt_05660 e21e0bc2d701f3a3240fba4eb3c19c5e 346 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 160 291 9.8E-17 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_20260 fcb254aa01d8e25fcfb2059eecb4e132 636 Pfam PF05960 Bacterial protein of unknown function (DUF885) 80 628 1.3E-166 T 13-10-2018 IPR010281 Protein of unknown function DUF885 ambt_11695 ee9b498645d8b53e21f3607fc7bd1bb5 427 SMART SM00387 323 427 9.1E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_11695 ee9b498645d8b53e21f3607fc7bd1bb5 427 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 426 6.6E-12 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_11695 ee9b498645d8b53e21f3607fc7bd1bb5 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 6.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_11695 ee9b498645d8b53e21f3607fc7bd1bb5 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 6.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_11695 ee9b498645d8b53e21f3607fc7bd1bb5 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 6.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_11695 ee9b498645d8b53e21f3607fc7bd1bb5 427 Gene3D G3DSA:1.10.287.130 181 278 2.3E-5 T 13-10-2018 ambt_11695 ee9b498645d8b53e21f3607fc7bd1bb5 427 SUPERFAMILY SSF55874 287 427 8.41E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_11695 ee9b498645d8b53e21f3607fc7bd1bb5 427 Gene3D G3DSA:3.30.565.10 284 427 2.3E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01405 0abbef317c067b5014bb7725245276a7 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 350 3.2E-77 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 ambt_01405 0abbef317c067b5014bb7725245276a7 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 349 1.1E-122 T 13-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 ambt_22100 fad27c3971d9be55100491610d41aab8 333 SUPERFAMILY SSF47413 2 59 4.93E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_22100 fad27c3971d9be55100491610d41aab8 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_22100 fad27c3971d9be55100491610d41aab8 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_22100 fad27c3971d9be55100491610d41aab8 333 SUPERFAMILY SSF53822 61 329 8.25E-79 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_22100 fad27c3971d9be55100491610d41aab8 333 Gene3D G3DSA:3.40.50.2300 62 305 7.8E-74 T 13-10-2018 ambt_22100 fad27c3971d9be55100491610d41aab8 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 ambt_22100 fad27c3971d9be55100491610d41aab8 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.0E-18 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_22100 fad27c3971d9be55100491610d41aab8 333 Pfam PF13377 Periplasmic binding protein-like domain 168 328 2.8E-31 T 13-10-2018 ambt_22100 fad27c3971d9be55100491610d41aab8 333 Gene3D G3DSA:3.40.50.2300 160 289 7.8E-74 T 13-10-2018 ambt_22100 fad27c3971d9be55100491610d41aab8 333 Gene3D G3DSA:1.10.260.40 1 57 1.0E-21 T 13-10-2018 ambt_22100 fad27c3971d9be55100491610d41aab8 333 SMART SM00354 1 71 3.7E-28 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_07505 11cafb39a125ea11477275946027ec4c 219 SUPERFAMILY SSF51735 2 219 9.21E-66 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_07505 11cafb39a125ea11477275946027ec4c 219 Gene3D G3DSA:3.40.50.720 1 219 7.1E-58 T 13-10-2018 ambt_07505 11cafb39a125ea11477275946027ec4c 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 4.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_07505 11cafb39a125ea11477275946027ec4c 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 4.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_07505 11cafb39a125ea11477275946027ec4c 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 4.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_07505 11cafb39a125ea11477275946027ec4c 219 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.7E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_07505 11cafb39a125ea11477275946027ec4c 219 Pfam PF00106 short chain dehydrogenase 2 181 5.8E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_07665 0075d73e07cd97b8b5f9d7d1d1200474 584 Gene3D G3DSA:3.20.20.80 59 475 2.8E-84 T 13-10-2018 ambt_07665 0075d73e07cd97b8b5f9d7d1d1200474 584 SUPERFAMILY SSF51445 62 482 1.02E-66 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_07665 0075d73e07cd97b8b5f9d7d1d1200474 584 SMART SM00642 70 473 5.5E-22 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_07665 0075d73e07cd97b8b5f9d7d1d1200474 584 SUPERFAMILY SSF51011 494 564 2.94E-5 T 13-10-2018 ambt_07665 0075d73e07cd97b8b5f9d7d1d1200474 584 Pfam PF00128 Alpha amylase, catalytic domain 114 436 8.0E-43 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_09560 6f545867b101eef7b264bf4facab85b2 394 SUPERFAMILY SSF56601 14 284 6.68E-83 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ambt_09560 6f545867b101eef7b264bf4facab85b2 394 SUPERFAMILY SSF69189 284 376 1.65E-23 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ambt_09560 6f545867b101eef7b264bf4facab85b2 394 Gene3D G3DSA:3.40.710.10 21 282 1.6E-92 T 13-10-2018 ambt_09560 6f545867b101eef7b264bf4facab85b2 394 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 374 2.3E-21 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ambt_09560 6f545867b101eef7b264bf4facab85b2 394 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 264 7.9E-88 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 ambt_09560 6f545867b101eef7b264bf4facab85b2 394 SMART SM00936 284 374 1.3E-31 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ambt_09560 6f545867b101eef7b264bf4facab85b2 394 Gene3D G3DSA:2.60.410.10 284 374 1.1E-25 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ambt_09560 6f545867b101eef7b264bf4facab85b2 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 1.5E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ambt_09560 6f545867b101eef7b264bf4facab85b2 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 1.5E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ambt_09560 6f545867b101eef7b264bf4facab85b2 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 67 78 1.5E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ambt_06520 36be5aa54f9f22f4a40bf8ae2dea4d66 212 Gene3D G3DSA:3.40.30.10 1 208 2.8E-70 T 13-10-2018 ambt_06520 36be5aa54f9f22f4a40bf8ae2dea4d66 212 Pfam PF01323 DSBA-like thioredoxin domain 5 205 2.6E-40 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 ambt_06520 36be5aa54f9f22f4a40bf8ae2dea4d66 212 SUPERFAMILY SSF52833 3 208 2.24E-49 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_20670 bfa04a7863f75c1830f56349f46e887a 556 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 266 553 3.5E-127 T 13-10-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type ambt_20670 bfa04a7863f75c1830f56349f46e887a 556 Pfam PF02653 Branched-chain amino acid transport system / permease component 268 539 7.7E-51 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ambt_14480 2968892bf0350f292589b84f6373c894 399 SMART SM00342 299 386 1.7E-8 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_14480 2968892bf0350f292589b84f6373c894 399 Gene3D G3DSA:1.10.10.60 281 392 3.4E-19 T 13-10-2018 ambt_14480 2968892bf0350f292589b84f6373c894 399 Pfam PF12833 Helix-turn-helix domain 305 388 3.2E-13 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_14480 2968892bf0350f292589b84f6373c894 399 SUPERFAMILY SSF46689 337 389 3.81E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_12330 fc9043c5204ce2aefc4e4127e46a83f6 170 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 12 159 7.6E-27 T 13-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 ambt_12330 fc9043c5204ce2aefc4e4127e46a83f6 170 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 12 78 6.4E-7 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ambt_12330 fc9043c5204ce2aefc4e4127e46a83f6 170 Gene3D G3DSA:3.40.50.1240 11 169 9.3E-30 T 13-10-2018 IPR029033 Histidine phosphatase superfamily ambt_12330 fc9043c5204ce2aefc4e4127e46a83f6 170 SMART SM00855 11 132 3.3E-4 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ambt_12330 fc9043c5204ce2aefc4e4127e46a83f6 170 SUPERFAMILY SSF53254 12 165 1.3E-18 T 13-10-2018 IPR029033 Histidine phosphatase superfamily ambt_21255 9227a77b948282e7ae7f5a1cb7082385 407 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 37 384 2.5E-16 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ambt_21255 9227a77b948282e7ae7f5a1cb7082385 407 SUPERFAMILY SSF50621 269 403 5.02E-32 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ambt_21255 9227a77b948282e7ae7f5a1cb7082385 407 Gene3D G3DSA:2.40.37.10 34 406 4.9E-95 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ambt_21255 9227a77b948282e7ae7f5a1cb7082385 407 Gene3D G3DSA:3.20.20.10 41 292 4.9E-95 T 13-10-2018 IPR029066 PLP-binding barrel ambt_21255 9227a77b948282e7ae7f5a1cb7082385 407 TIGRFAM TIGR03099 dCO2ase_PEP1: pyridoxal-dependent decarboxylase, exosortase A system-associated 13 407 7.6E-163 T 13-10-2018 IPR017530 Pyridoxal-dependent decarboxylase, exosortase system type 1 associated ambt_21255 9227a77b948282e7ae7f5a1cb7082385 407 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 43 290 4.1E-38 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ambt_21255 9227a77b948282e7ae7f5a1cb7082385 407 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 7.5E-7 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_21255 9227a77b948282e7ae7f5a1cb7082385 407 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 7.5E-7 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_21255 9227a77b948282e7ae7f5a1cb7082385 407 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 280 299 7.5E-7 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ambt_21255 9227a77b948282e7ae7f5a1cb7082385 407 SUPERFAMILY SSF51419 33 292 9.49E-61 T 13-10-2018 IPR029066 PLP-binding barrel ambt_06105 a6d417889d3512ea47c3d65ca8e55be0 402 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ambt_06105 a6d417889d3512ea47c3d65ca8e55be0 402 SUPERFAMILY SSF53383 1 398 4.81E-96 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_06105 a6d417889d3512ea47c3d65ca8e55be0 402 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 93 113 1.9E-11 T 13-10-2018 ambt_06105 a6d417889d3512ea47c3d65ca8e55be0 402 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 162 186 1.9E-11 T 13-10-2018 ambt_06105 a6d417889d3512ea47c3d65ca8e55be0 402 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 237 261 1.9E-11 T 13-10-2018 ambt_06105 a6d417889d3512ea47c3d65ca8e55be0 402 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 115 136 1.9E-11 T 13-10-2018 ambt_06105 a6d417889d3512ea47c3d65ca8e55be0 402 Pfam PF00155 Aminotransferase class I and II 32 388 1.7E-55 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ambt_06105 a6d417889d3512ea47c3d65ca8e55be0 402 Gene3D G3DSA:3.40.640.10 3 400 4.7E-110 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_21200 db5334e5606a671818616caa36f99211 248 ProDom PD004647 DEGRADATION HYDROLASE GLYCOSIDASE XYLAN A XYLANASE PRECURSOR SIGNAL REPEAT 14- 64 247 1.0E-4 T 13-10-2018 ambt_21200 db5334e5606a671818616caa36f99211 248 Pfam PF06452 Carbohydrate family 9 binding domain-like 32 248 7.1E-47 T 13-10-2018 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6717|MetaCyc: PWY-6784 ambt_21200 db5334e5606a671818616caa36f99211 248 SUPERFAMILY SSF49344 23 247 1.33E-31 T 13-10-2018 ambt_21200 db5334e5606a671818616caa36f99211 248 Gene3D G3DSA:2.60.40.1190 23 247 1.1E-35 T 13-10-2018 ambt_03270 bde6007bdbb0c32535f53208cb6f033a 367 Gene3D G3DSA:3.30.70.360 171 280 2.4E-99 T 13-10-2018 ambt_03270 bde6007bdbb0c32535f53208cb6f033a 367 PIRSF PIRSF037238 3 364 1.1E-93 T 13-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase ambt_03270 bde6007bdbb0c32535f53208cb6f033a 367 Pfam PF07687 Peptidase dimerisation domain 168 270 7.7E-16 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain ambt_03270 bde6007bdbb0c32535f53208cb6f033a 367 SUPERFAMILY SSF53187 10 363 1.15E-42 T 13-10-2018 ambt_03270 bde6007bdbb0c32535f53208cb6f033a 367 Pfam PF01546 Peptidase family M20/M25/M40 69 360 1.1E-20 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 ambt_03270 bde6007bdbb0c32535f53208cb6f033a 367 Gene3D G3DSA:3.40.630.10 10 352 2.4E-99 T 13-10-2018 ambt_03270 bde6007bdbb0c32535f53208cb6f033a 367 SUPERFAMILY SSF55031 171 275 4.06E-20 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ambt_03270 bde6007bdbb0c32535f53208cb6f033a 367 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 68 77 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ambt_12160 97b84ea1e43721ede1931c0f22244be2 450 Gene3D G3DSA:3.30.565.10 302 450 7.8E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_12160 97b84ea1e43721ede1931c0f22244be2 450 SUPERFAMILY SSF47384 215 290 5.3E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_12160 97b84ea1e43721ede1931c0f22244be2 450 Gene3D G3DSA:1.10.287.130 172 291 2.7E-14 T 13-10-2018 ambt_12160 97b84ea1e43721ede1931c0f22244be2 450 SMART SM00387 337 449 3.5E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_12160 97b84ea1e43721ede1931c0f22244be2 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 291 9.3E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_12160 97b84ea1e43721ede1931c0f22244be2 450 SUPERFAMILY SSF55874 300 446 4.71E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_12160 97b84ea1e43721ede1931c0f22244be2 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 447 2.0E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_12160 97b84ea1e43721ede1931c0f22244be2 450 SMART SM00388 228 296 2.1E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_12160 97b84ea1e43721ede1931c0f22244be2 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 6.0E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_12160 97b84ea1e43721ede1931c0f22244be2 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 6.0E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_12160 97b84ea1e43721ede1931c0f22244be2 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 6.0E-5 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 40.653 T 13-10-2018 IPR011897 Translation elongation factor P-like, YeiP ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 Gene3D G3DSA:2.40.50.140 67 129 1.3E-13 T 13-10-2018 ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 Gene3D G3DSA:2.40.50.140 131 188 1.4E-23 T 13-10-2018 ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 SUPERFAMILY SSF50249 132 188 4.45E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 SMART SM00841 132 187 2.5E-31 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 SUPERFAMILY SSF50104 1 65 6.02E-13 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 Gene3D G3DSA:2.30.30.30 1 64 7.3E-12 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 PIRSF PIRSF005901 1 188 1.1E-61 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 SUPERFAMILY SSF50249 69 129 3.77E-10 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 2.5E-16 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 7.9E-14 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 4.1E-22 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ambt_20230 82589edc0f54c5f2db026fd02b7f56b4 188 SMART SM01185 69 124 2.1E-13 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ambt_05925 fc41eb44f825d89520ca68a2353a7899 232 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 98 202 8.0E-12 T 13-10-2018 ambt_05925 fc41eb44f825d89520ca68a2353a7899 232 Pfam PF12917 HD containing hydrolase-like enzyme 29 205 1.1E-10 T 13-10-2018 IPR027366 HD containing hydrolase-like enzyme ambt_05925 fc41eb44f825d89520ca68a2353a7899 232 SUPERFAMILY SSF109604 22 189 1.49E-24 T 13-10-2018 ambt_05925 fc41eb44f825d89520ca68a2353a7899 232 Gene3D G3DSA:1.10.3210.10 17 217 3.8E-61 T 13-10-2018 ambt_07040 877a37b46976e1a8d9c5bc58c3f56f44 159 SMART SM00347 24 124 1.1E-19 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_07040 877a37b46976e1a8d9c5bc58c3f56f44 159 Pfam PF01047 MarR family 31 89 6.6E-15 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_07040 877a37b46976e1a8d9c5bc58c3f56f44 159 SUPERFAMILY SSF46785 3 139 3.52E-31 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_07040 877a37b46976e1a8d9c5bc58c3f56f44 159 Gene3D G3DSA:1.10.10.10 1 142 2.2E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_07040 877a37b46976e1a8d9c5bc58c3f56f44 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 4.0E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_07040 877a37b46976e1a8d9c5bc58c3f56f44 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 4.0E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_07040 877a37b46976e1a8d9c5bc58c3f56f44 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 4.0E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_07040 877a37b46976e1a8d9c5bc58c3f56f44 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 4.0E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_18545 637d308649f8705ecae4bd531e4d7144 293 SUPERFAMILY SSF53850 87 289 1.01E-34 T 13-10-2018 ambt_18545 637d308649f8705ecae4bd531e4d7144 293 SUPERFAMILY SSF46785 2 111 2.6E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_18545 637d308649f8705ecae4bd531e4d7144 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.5E-13 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_18545 637d308649f8705ecae4bd531e4d7144 293 Gene3D G3DSA:3.40.190.290 90 285 1.6E-33 T 13-10-2018 ambt_18545 637d308649f8705ecae4bd531e4d7144 293 Gene3D G3DSA:1.10.10.10 1 89 3.6E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_18545 637d308649f8705ecae4bd531e4d7144 293 Pfam PF03466 LysR substrate binding domain 86 285 2.4E-33 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_16010 2a0a94cce9b88cb1b1aa7226e94e33bd 141 SMART SM00450 40 138 1.0E-20 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_16010 2a0a94cce9b88cb1b1aa7226e94e33bd 141 Pfam PF00581 Rhodanese-like domain 45 135 5.2E-19 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_16010 2a0a94cce9b88cb1b1aa7226e94e33bd 141 Gene3D G3DSA:3.40.250.10 25 141 5.3E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_16010 2a0a94cce9b88cb1b1aa7226e94e33bd 141 SUPERFAMILY SSF52821 17 139 1.44E-29 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_20905 d34c691cfe0f661af39b936262d39155 372 Gene3D G3DSA:2.40.50.100 55 201 1.0E-69 T 13-10-2018 ambt_20905 d34c691cfe0f661af39b936262d39155 372 Gene3D G3DSA:2.40.30.170 40 276 1.0E-69 T 13-10-2018 ambt_20905 d34c691cfe0f661af39b936262d39155 372 SUPERFAMILY SSF111369 46 275 1.44E-21 T 13-10-2018 ambt_20905 d34c691cfe0f661af39b936262d39155 372 Gene3D G3DSA:2.40.420.20 32 358 1.0E-69 T 13-10-2018 ambt_20905 d34c691cfe0f661af39b936262d39155 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 31 361 2.3E-67 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_20905 d34c691cfe0f661af39b936262d39155 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 269 2.3E-15 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_20905 d34c691cfe0f661af39b936262d39155 372 Gene3D G3DSA:1.10.287.470 89 162 1.0E-69 T 13-10-2018 ambt_04365 5d0b9a73617894478c8c6c697865178b 366 SUPERFAMILY SSF142695 205 365 5.49E-43 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ambt_04365 5d0b9a73617894478c8c6c697865178b 366 SUPERFAMILY SSF55821 2 201 3.89E-88 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ambt_04365 5d0b9a73617894478c8c6c697865178b 366 Pfam PF00925 GTP cyclohydrolase II 208 364 4.7E-34 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ambt_04365 5d0b9a73617894478c8c6c697865178b 366 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 1.2E-86 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_04365 5d0b9a73617894478c8c6c697865178b 366 PIRSF PIRSF001259 1 365 1.5E-128 T 13-10-2018 ambt_04365 5d0b9a73617894478c8c6c697865178b 366 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 199 2.1E-78 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_04365 5d0b9a73617894478c8c6c697865178b 366 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 39.188 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_04365 5d0b9a73617894478c8c6c697865178b 366 Gene3D G3DSA:3.90.870.10 1 206 1.6E-90 T 13-10-2018 ambt_15450 c5fa2b21037af5a61ad9126ac154c4d0 476 SUPERFAMILY SSF111369 150 376 2.62E-18 T 13-10-2018 ambt_15450 c5fa2b21037af5a61ad9126ac154c4d0 476 Pfam PF13437 HlyD family secretion protein 276 376 1.1E-7 T 13-10-2018 ambt_15450 c5fa2b21037af5a61ad9126ac154c4d0 476 Gene3D G3DSA:2.40.50.100 159 306 1.6E-34 T 13-10-2018 ambt_15450 c5fa2b21037af5a61ad9126ac154c4d0 476 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 135 424 1.8E-33 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_15450 c5fa2b21037af5a61ad9126ac154c4d0 476 Gene3D G3DSA:2.40.30.170 151 398 1.6E-34 T 13-10-2018 ambt_15450 c5fa2b21037af5a61ad9126ac154c4d0 476 Gene3D G3DSA:2.40.420.20 399 421 1.6E-34 T 13-10-2018 ambt_15450 c5fa2b21037af5a61ad9126ac154c4d0 476 Gene3D G3DSA:1.10.287.470 196 272 1.6E-34 T 13-10-2018 ambt_10435 bd518338ed8ce21821c1f51bb093c8fd 156 PIRSF PIRSF006181 1 156 1.1E-50 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ambt_10435 bd518338ed8ce21821c1f51bb093c8fd 156 Gene3D G3DSA:3.90.960.10 1 156 7.1E-52 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ambt_10435 bd518338ed8ce21821c1f51bb093c8fd 156 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 154 1.7E-51 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ambt_10435 bd518338ed8ce21821c1f51bb093c8fd 156 SUPERFAMILY SSF55826 2 153 3.92E-39 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ambt_10435 bd518338ed8ce21821c1f51bb093c8fd 156 Pfam PF04073 Aminoacyl-tRNA editing domain 32 144 5.9E-22 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ambt_14190 c41664b2cea320dd1e57f1daa360956c 365 SUPERFAMILY SSF52151 17 230 3.92E-36 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ambt_14190 c41664b2cea320dd1e57f1daa360956c 365 Gene3D G3DSA:3.40.1090.10 92 272 2.1E-8 T 13-10-2018 ambt_14190 c41664b2cea320dd1e57f1daa360956c 365 Gene3D G3DSA:3.40.1090.10 12 91 2.5E-12 T 13-10-2018 ambt_14190 c41664b2cea320dd1e57f1daa360956c 365 Pfam PF01734 Patatin-like phospholipase 24 214 4.9E-13 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ambt_03545 524a040aa4ab796ecb81fe5c64001ffb 355 SUPERFAMILY SSF52540 5 264 1.31E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_03545 524a040aa4ab796ecb81fe5c64001ffb 355 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 268 8.5E-109 T 13-10-2018 IPR017466 ATPase, secretion system, PEP-CTERM, predicted ambt_03545 524a040aa4ab796ecb81fe5c64001ffb 355 Gene3D G3DSA:3.40.50.300 27 184 7.6E-12 T 13-10-2018 ambt_03545 524a040aa4ab796ecb81fe5c64001ffb 355 SMART SM00382 42 204 2.9E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_03545 524a040aa4ab796ecb81fe5c64001ffb 355 Pfam PF13401 AAA domain 42 170 1.5E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_15470 37a7bc0c5f6a77449ea9ba269c757334 572 TIGRFAM TIGR03545 TIGR03545: TIGR03545 family protein 14 524 9.4E-98 T 13-10-2018 IPR019934 Conserved hypothetical protein CHP03545 ambt_16100 01cdb121e3d6c68616746319c4ce29fd 436 SUPERFAMILY SSF55729 291 412 8.58E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_16100 01cdb121e3d6c68616746319c4ce29fd 436 SUPERFAMILY SSF53633 4 288 4.19E-67 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_16100 01cdb121e3d6c68616746319c4ce29fd 436 Pfam PF00696 Amino acid kinase family 25 247 3.5E-31 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ambt_16100 01cdb121e3d6c68616746319c4ce29fd 436 PIRSF PIRSF000423 1 436 3.8E-180 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 ambt_16100 01cdb121e3d6c68616746319c4ce29fd 436 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 434 1.3E-174 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 ambt_16100 01cdb121e3d6c68616746319c4ce29fd 436 Pfam PF00583 Acetyltransferase (GNAT) family 323 396 3.2E-8 T 13-10-2018 IPR000182 GNAT domain ambt_16100 01cdb121e3d6c68616746319c4ce29fd 436 Gene3D G3DSA:3.40.1160.10 8 287 6.2E-89 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_16100 01cdb121e3d6c68616746319c4ce29fd 436 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 436 197.986 T 13-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 ambt_16100 01cdb121e3d6c68616746319c4ce29fd 436 Gene3D G3DSA:3.40.630.30 288 436 1.9E-37 T 13-10-2018 ambt_11305 6574ee93ea6b3047527eeb52f47b82a4 397 Gene3D G3DSA:3.40.50.2000 215 378 2.2E-35 T 13-10-2018 ambt_11305 6574ee93ea6b3047527eeb52f47b82a4 397 Pfam PF13439 Glycosyltransferase Family 4 113 204 6.3E-7 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ambt_11305 6574ee93ea6b3047527eeb52f47b82a4 397 Gene3D G3DSA:3.40.50.2000 84 214 2.9E-12 T 13-10-2018 ambt_11305 6574ee93ea6b3047527eeb52f47b82a4 397 Pfam PF00534 Glycosyl transferases group 1 218 376 1.4E-30 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_11305 6574ee93ea6b3047527eeb52f47b82a4 397 SUPERFAMILY SSF53756 101 394 2.06E-60 T 13-10-2018 ambt_05525 d41a9fa9383e1f26fb5b2d523777472f 469 Pfam PF01979 Amidohydrolase family 76 441 4.1E-56 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ambt_05525 d41a9fa9383e1f26fb5b2d523777472f 469 Gene3D G3DSA:3.20.20.140 80 394 1.9E-117 T 13-10-2018 ambt_05525 d41a9fa9383e1f26fb5b2d523777472f 469 Gene3D G3DSA:2.30.40.10 43 442 1.9E-117 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_05525 d41a9fa9383e1f26fb5b2d523777472f 469 SUPERFAMILY SSF51338 25 468 5.28E-19 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_05525 d41a9fa9383e1f26fb5b2d523777472f 469 SUPERFAMILY SSF51556 79 393 9.98E-92 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.0E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 Hamap MF_01454 GTPase Obg [obg]. 2 333 47.674 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 Pfam PF01018 GTP1/OBG 4 157 6.2E-56 T 13-10-2018 IPR006169 GTP1/OBG domain ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 SUPERFAMILY SSF52540 152 336 7.62E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 SUPERFAMILY SSF82051 2 157 8.5E-54 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 Gene3D G3DSA:3.40.50.300 159 335 9.2E-53 T 13-10-2018 ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 Gene3D G3DSA:2.70.210.12 1 158 1.8E-57 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.5E-146 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 PIRSF PIRSF002401 1 372 7.9E-139 T 13-10-2018 IPR035101 GTP-binding protein, Obg-type ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 9.6E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 9.6E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 9.6E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_15530 3a8e2b65997ac510d2d407a2f359e79c 398 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 9.6E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_18365 83ad0e31d17ba33224668c0ec395ccaf 424 Pfam PF07687 Peptidase dimerisation domain 212 312 2.0E-6 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain ambt_18365 83ad0e31d17ba33224668c0ec395ccaf 424 SUPERFAMILY SSF53187 4 402 4.29E-91 T 13-10-2018 ambt_18365 83ad0e31d17ba33224668c0ec395ccaf 424 Gene3D G3DSA:3.30.70.360 212 325 4.6E-143 T 13-10-2018 ambt_18365 83ad0e31d17ba33224668c0ec395ccaf 424 SUPERFAMILY SSF55031 212 327 5.41E-28 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ambt_18365 83ad0e31d17ba33224668c0ec395ccaf 424 Pfam PF01546 Peptidase family M20/M25/M40 80 401 6.9E-35 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 ambt_18365 83ad0e31d17ba33224668c0ec395ccaf 424 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 9 402 5.1E-129 T 13-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ambt_18365 83ad0e31d17ba33224668c0ec395ccaf 424 PIRSF PIRSF001235 3 409 1.2E-127 T 13-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ambt_18365 83ad0e31d17ba33224668c0ec395ccaf 424 Gene3D G3DSA:3.40.630.10 16 399 4.6E-143 T 13-10-2018 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 SUPERFAMILY SSF47323 655 930 1.78E-72 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 Gene3D G3DSA:3.90.740.10 195 412 9.6E-240 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 Pfam PF06827 Zinc finger found in FPG and IleRS 899 927 1.0E-6 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 844 1.9E-289 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 930 21.258 T 13-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 Gene3D G3DSA:3.40.50.620 25 632 9.6E-240 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 Gene3D G3DSA:1.10.730.20 643 930 6.7E-88 T 13-10-2018 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 643 3.1E-212 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 405 420 2.7E-33 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 530 543 2.7E-33 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 2.7E-33 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 564 573 2.7E-33 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 2.7E-33 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 SUPERFAMILY SSF52374 4 651 2.23E-139 T 13-10-2018 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 Pfam PF08264 Anticodon-binding domain of tRNA 687 842 2.7E-27 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ambt_04140 c486b6c7038f0907ee4345d3082bd8e2 939 SUPERFAMILY SSF50677 204 407 2.83E-55 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ambt_17930 f5174bee59026a526b459c9ccb269720 246 Gene3D G3DSA:2.60.120.10 1 246 2.6E-71 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_17930 f5174bee59026a526b459c9ccb269720 246 Pfam PF07883 Cupin domain 2 69 1.4E-21 T 13-10-2018 IPR013096 Cupin 2, conserved barrel ambt_17930 f5174bee59026a526b459c9ccb269720 246 SUPERFAMILY SSF51182 1 246 7.99E-59 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_11835 c85bfedc49a3c9451c640c0a9fcb72d7 372 TIGRFAM TIGR00433 bioB: biotin synthase 26 321 2.9E-125 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ambt_11835 c85bfedc49a3c9451c640c0a9fcb72d7 372 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 231 321 2.5E-20 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ambt_11835 c85bfedc49a3c9451c640c0a9fcb72d7 372 Gene3D G3DSA:3.20.20.70 15 326 2.5E-131 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_11835 c85bfedc49a3c9451c640c0a9fcb72d7 372 SMART SM00876 231 323 2.8E-47 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ambt_11835 c85bfedc49a3c9451c640c0a9fcb72d7 372 PIRSF PIRSF001619 3 330 2.7E-137 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ambt_11835 c85bfedc49a3c9451c640c0a9fcb72d7 372 SMART SM00729 54 266 1.5E-38 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ambt_11835 c85bfedc49a3c9451c640c0a9fcb72d7 372 Pfam PF04055 Radical SAM superfamily 61 212 5.0E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_11835 c85bfedc49a3c9451c640c0a9fcb72d7 372 SUPERFAMILY SSF102114 16 321 1.27E-93 T 13-10-2018 ambt_11835 c85bfedc49a3c9451c640c0a9fcb72d7 372 Hamap MF_01694 Biotin synthase [bioB]. 16 324 42.379 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ambt_18505 c925cca7af0684793df79b89e29fbec0 301 Gene3D G3DSA:3.40.190.10 94 295 1.6E-44 T 13-10-2018 ambt_18505 c925cca7af0684793df79b89e29fbec0 301 SUPERFAMILY SSF46785 9 90 4.35E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_18505 c925cca7af0684793df79b89e29fbec0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 3.0E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_18505 c925cca7af0684793df79b89e29fbec0 301 Gene3D G3DSA:1.10.10.10 2 92 5.2E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_18505 c925cca7af0684793df79b89e29fbec0 301 SUPERFAMILY SSF53850 94 299 5.25E-31 T 13-10-2018 ambt_18505 c925cca7af0684793df79b89e29fbec0 301 Pfam PF03466 LysR substrate binding domain 99 298 9.3E-15 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_18505 c925cca7af0684793df79b89e29fbec0 301 Gene3D G3DSA:3.40.190.10 175 271 1.6E-44 T 13-10-2018 ambt_18305 a2340714d9b4cf56c45ea24fe83edcb7 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 9.9E-51 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 ambt_18305 a2340714d9b4cf56c45ea24fe83edcb7 128 SUPERFAMILY SSF55298 1 127 1.04E-44 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ambt_18305 a2340714d9b4cf56c45ea24fe83edcb7 128 Gene3D G3DSA:3.30.1330.40 1 126 3.0E-49 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ambt_18305 a2340714d9b4cf56c45ea24fe83edcb7 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 ambt_18305 a2340714d9b4cf56c45ea24fe83edcb7 128 Pfam PF01042 Endoribonuclease L-PSP 9 124 2.3E-41 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 ambt_22125 92364fbd7e989f6a0317c635d021d14e 193 SMART SM01144 1 188 2.7E-34 T 13-10-2018 IPR005636 DTW ambt_22125 92364fbd7e989f6a0317c635d021d14e 193 Pfam PF03942 DTW domain 3 165 3.4E-36 T 13-10-2018 IPR005636 DTW ambt_04880 1a2ace06e416af202d1ff1acd8cc94fa 288 SUPERFAMILY SSF52096 12 277 6.26E-73 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_04880 1a2ace06e416af202d1ff1acd8cc94fa 288 Gene3D G3DSA:3.90.226.10 1 221 2.0E-62 T 13-10-2018 ambt_04880 1a2ace06e416af202d1ff1acd8cc94fa 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 119 139 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ambt_04880 1a2ace06e416af202d1ff1acd8cc94fa 288 Gene3D G3DSA:1.10.12.10 222 279 2.8E-20 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ambt_04880 1a2ace06e416af202d1ff1acd8cc94fa 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 22 275 2.3E-45 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ambt_14700 4c90dd9be3d90d34d2b620aae06fa301 329 Gene3D G3DSA:3.55.50.30 255 329 2.2E-9 T 13-10-2018 ambt_14700 4c90dd9be3d90d34d2b620aae06fa301 329 Pfam PF04773 FecR protein 114 204 4.8E-21 T 13-10-2018 IPR006860 FecR protein ambt_14700 4c90dd9be3d90d34d2b620aae06fa301 329 PIRSF PIRSF018266 1 329 3.1E-72 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component ambt_14700 4c90dd9be3d90d34d2b620aae06fa301 329 Gene3D G3DSA:2.60.120.1440 93 252 4.0E-28 T 13-10-2018 ambt_14700 4c90dd9be3d90d34d2b620aae06fa301 329 Pfam PF16220 Domain of unknown function (DUF4880) 13 51 3.2E-7 T 13-10-2018 IPR032623 FecR, N-terminal ambt_14700 4c90dd9be3d90d34d2b620aae06fa301 329 Pfam PF16344 Domain of unknown function (DUF4974) 229 324 1.3E-10 T 13-10-2018 IPR032508 Protein FecR, C-terminal ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 306 1.5E-23 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 SMART SM00662 22 232 3.4E-105 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 Gene3D G3DSA:3.30.1360.10 16 226 7.0E-83 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 28 226 4.8E-23 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 SUPERFAMILY SSF56553 52 176 3.4E-42 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 23 314 1.1E-111 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 Gene3D G3DSA:2.170.120.12 52 175 7.0E-83 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 Gene3D G3DSA:1.10.150.20 242 327 2.2E-38 T 13-10-2018 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 4 315 35.046 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 326 2.0E-35 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 SUPERFAMILY SSF47789 249 324 4.19E-25 T 13-10-2018 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 154 4.2E-24 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19045 cadca8ab69f289b6929ebe753ceaf55f 328 SUPERFAMILY SSF55257 6 231 8.34E-31 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_14570 403b7eb6f6fb85c9cde8489b0a94ca48 266 Pfam PF00005 ABC transporter 21 168 5.7E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_14570 403b7eb6f6fb85c9cde8489b0a94ca48 266 SUPERFAMILY SSF52540 4 235 3.47E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14570 403b7eb6f6fb85c9cde8489b0a94ca48 266 SMART SM00382 29 224 4.7E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_14570 403b7eb6f6fb85c9cde8489b0a94ca48 266 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_14570 403b7eb6f6fb85c9cde8489b0a94ca48 266 Gene3D G3DSA:3.40.50.300 1 249 2.3E-63 T 13-10-2018 ambt_08275 19078b8a84e1378fcdce34a8c94522fa 307 Pfam PF00582 Universal stress protein family 4 144 1.0E-16 T 13-10-2018 IPR006016 UspA ambt_08275 19078b8a84e1378fcdce34a8c94522fa 307 Pfam PF00582 Universal stress protein family 217 297 1.3E-10 T 13-10-2018 IPR006016 UspA ambt_08275 19078b8a84e1378fcdce34a8c94522fa 307 PRINTS PR01438 Universal stress protein signature 275 297 1.4E-7 T 13-10-2018 IPR006015 Universal stress protein A ambt_08275 19078b8a84e1378fcdce34a8c94522fa 307 PRINTS PR01438 Universal stress protein signature 4 22 1.4E-7 T 13-10-2018 IPR006015 Universal stress protein A ambt_08275 19078b8a84e1378fcdce34a8c94522fa 307 PRINTS PR01438 Universal stress protein signature 257 269 1.4E-7 T 13-10-2018 IPR006015 Universal stress protein A ambt_08275 19078b8a84e1378fcdce34a8c94522fa 307 Gene3D G3DSA:3.40.50.12370 1 307 9.3E-106 T 13-10-2018 ambt_08275 19078b8a84e1378fcdce34a8c94522fa 307 SUPERFAMILY SSF52402 154 304 1.26E-17 T 13-10-2018 ambt_08275 19078b8a84e1378fcdce34a8c94522fa 307 SUPERFAMILY SSF52402 4 155 6.11E-25 T 13-10-2018 ambt_04640 941009f4c048328575c1f48449b442c1 205 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 118 202 2.8E-15 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 ambt_04640 941009f4c048328575c1f48449b442c1 205 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 9 205 35.87 T 13-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 ambt_04640 941009f4c048328575c1f48449b442c1 205 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 117 200 3.6E-29 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ambt_04640 941009f4c048328575c1f48449b442c1 205 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 57 106 1.0E-16 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ambt_04640 941009f4c048328575c1f48449b442c1 205 SUPERFAMILY SSF141734 10 121 6.02E-42 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 ambt_04640 941009f4c048328575c1f48449b442c1 205 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 34 107 1.0E-28 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ambt_04640 941009f4c048328575c1f48449b442c1 205 SUPERFAMILY SSF101386 116 204 7.1E-24 T 13-10-2018 ambt_04640 941009f4c048328575c1f48449b442c1 205 Gene3D G3DSA:1.10.287.1080 114 205 3.6E-28 T 13-10-2018 ambt_04640 941009f4c048328575c1f48449b442c1 205 Gene3D G3DSA:3.10.20.400 3 98 9.6E-32 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 ambt_04640 941009f4c048328575c1f48449b442c1 205 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 114 200 18.775 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ambt_14675 b308159ec3ac34643c47f5cf76c6b356 420 Pfam PF00033 Cytochrome b/b6/petB 24 211 2.3E-65 T 13-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ambt_14675 b308159ec3ac34643c47f5cf76c6b356 420 Gene3D G3DSA:1.20.810.10 1 420 2.3E-143 T 13-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 ambt_14675 b308159ec3ac34643c47f5cf76c6b356 420 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 296 397 1.7E-39 T 13-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ambt_14675 b308159ec3ac34643c47f5cf76c6b356 420 SUPERFAMILY SSF81342 6 297 9.89E-88 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ambt_14675 b308159ec3ac34643c47f5cf76c6b356 420 SUPERFAMILY SSF81648 298 413 5.01E-32 T 13-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ambt_14675 b308159ec3ac34643c47f5cf76c6b356 420 PIRSF PIRSF038885 1 420 7.0E-150 T 13-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 Gene3D G3DSA:3.40.50.300 90 285 2.7E-122 T 13-10-2018 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 SUPERFAMILY SSF47446 329 431 3.27E-38 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 Pfam PF02978 Signal peptide binding domain 329 427 1.1E-34 T 13-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 Gene3D G3DSA:1.10.260.30 328 450 3.0E-45 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 SMART SM00962 100 296 2.4E-114 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 SMART SM00963 1 86 1.0E-33 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 SMART SM00382 99 247 1.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.5E-20 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 Gene3D G3DSA:1.20.120.140 4 305 2.7E-122 T 13-10-2018 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 SUPERFAMILY SSF52540 42 353 2.92E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.202 T 13-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.8E-74 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ambt_12310 f67fab21fbd6b5fde188df5d2e3bdbd0 476 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.4E-176 T 13-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 Pfam PF00873 AcrB/AcrD/AcrF family 7 1004 6.3E-138 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 Gene3D G3DSA:3.30.70.1430 43 799 8.0E-224 T 13-10-2018 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 SUPERFAMILY SSF82866 789 1009 8.76E-42 T 13-10-2018 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 SUPERFAMILY SSF82714 707 790 9.42E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 Gene3D G3DSA:3.30.70.1430 555 654 8.0E-224 T 13-10-2018 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 Gene3D G3DSA:3.30.2090.10 182 271 8.0E-224 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 SUPERFAMILY SSF82866 294 491 5.49E-35 T 13-10-2018 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 Gene3D G3DSA:3.30.70.1320 139 329 8.0E-224 T 13-10-2018 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 SUPERFAMILY SSF82693 554 604 1.23E-5 T 13-10-2018 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 Gene3D G3DSA:1.20.1640.10 16 504 8.0E-224 T 13-10-2018 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 2.0E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 2.0E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 2.0E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 2.0E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 2.0E-22 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 SUPERFAMILY SSF82693 43 138 3.01E-14 T 13-10-2018 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 Gene3D G3DSA:3.30.2090.10 706 791 8.0E-224 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 Gene3D G3DSA:1.20.1640.10 505 1002 8.0E-224 T 13-10-2018 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 SUPERFAMILY SSF82714 188 269 1.96E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 SUPERFAMILY SSF82693 140 327 1.94E-15 T 13-10-2018 ambt_17655 30e0575ac599b47d73e5e739c21c2f52 1013 Gene3D G3DSA:3.30.70.1440 655 850 8.0E-224 T 13-10-2018 ambt_19740 2a1b419aeb2b3a83b979c644bf226996 354 Gene3D G3DSA:3.75.10.10 3 334 1.8E-93 T 13-10-2018 ambt_19740 2a1b419aeb2b3a83b979c644bf226996 354 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 8 332 2.3E-91 T 13-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 ambt_19740 2a1b419aeb2b3a83b979c644bf226996 354 SUPERFAMILY SSF55909 3 332 2.68E-93 T 13-10-2018 ambt_21625 fecd598d89f58695db714af4eef6d589 790 Gene3D G3DSA:1.10.150.310 497 628 4.0E-49 T 13-10-2018 ambt_21625 fecd598d89f58695db714af4eef6d589 790 Pfam PF00575 S1 RNA binding domain 648 718 6.0E-20 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_21625 fecd598d89f58695db714af4eef6d589 790 Pfam PF09371 Tex-like protein N-terminal domain 6 190 2.5E-66 T 13-10-2018 IPR018974 Tex-like protein, N-terminal ambt_21625 fecd598d89f58695db714af4eef6d589 790 SUPERFAMILY SSF158832 2 318 2.75E-116 T 13-10-2018 ambt_21625 fecd598d89f58695db714af4eef6d589 790 Gene3D G3DSA:2.40.50.140 629 724 1.4E-28 T 13-10-2018 ambt_21625 fecd598d89f58695db714af4eef6d589 790 Pfam PF12836 Helix-hairpin-helix motif 489 553 5.0E-27 T 13-10-2018 ambt_21625 fecd598d89f58695db714af4eef6d589 790 SUPERFAMILY SSF53098 319 467 8.34E-48 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_21625 fecd598d89f58695db714af4eef6d589 790 Gene3D G3DSA:1.10.10.650 1 106 1.6E-39 T 13-10-2018 IPR023319 Tex-like protein, HTH domain superfamily ambt_21625 fecd598d89f58695db714af4eef6d589 790 SUPERFAMILY SSF50249 634 718 2.69E-23 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_21625 fecd598d89f58695db714af4eef6d589 790 Gene3D G3DSA:3.30.420.140 322 449 8.0E-153 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 ambt_21625 fecd598d89f58695db714af4eef6d589 790 Pfam PF16921 Tex protein YqgF-like domain 323 449 5.1E-52 T 13-10-2018 IPR032639 Tex protein, YqgF-like domain ambt_21625 fecd598d89f58695db714af4eef6d589 790 Gene3D G3DSA:1.10.3500.10 109 496 8.0E-153 T 13-10-2018 IPR023323 Tex-like domain superfamily ambt_21625 fecd598d89f58695db714af4eef6d589 790 SMART SM00732 323 422 1.3E-34 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 ambt_21625 fecd598d89f58695db714af4eef6d589 790 SUPERFAMILY SSF47781 558 630 1.09E-19 T 13-10-2018 IPR010994 RuvA domain 2-like ambt_21625 fecd598d89f58695db714af4eef6d589 790 SMART SM00316 647 718 5.2E-23 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_21625 fecd598d89f58695db714af4eef6d589 790 SUPERFAMILY SSF47781 468 554 1.89E-25 T 13-10-2018 IPR010994 RuvA domain 2-like ambt_09715 1e4b4b31b5c020dcec5f2797d000ccf0 140 Pfam PF16108 Domain of unknown function (DUF4826) 12 137 1.0E-55 T 13-10-2018 IPR032251 Protein of unknown function DUF4826 ambt_12845 f47b4dad76bfbcf7fb249dd73a212f65 164 SUPERFAMILY SSF103481 44 149 3.92E-10 T 13-10-2018 ambt_12845 f47b4dad76bfbcf7fb249dd73a212f65 164 Pfam PF00892 EamA-like transporter family 13 144 4.0E-14 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_05835 8e2e651c1171c5273ca863a8d458d2b3 215 Pfam PF01081 KDPG and KHG aldolase 13 204 4.9E-80 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ambt_05835 8e2e651c1171c5273ca863a8d458d2b3 215 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 41 50 - T 13-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ambt_05835 8e2e651c1171c5273ca863a8d458d2b3 215 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 129 142 - T 13-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ambt_05835 8e2e651c1171c5273ca863a8d458d2b3 215 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 12 210 1.7E-80 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ambt_05835 8e2e651c1171c5273ca863a8d458d2b3 215 Gene3D G3DSA:3.20.20.70 2 213 9.3E-75 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_05835 8e2e651c1171c5273ca863a8d458d2b3 215 SUPERFAMILY SSF51569 6 210 1.39E-70 T 13-10-2018 ambt_18570 98042e575a403a28a440ece66a39866a 1098 SUPERFAMILY SSF56024 15 148 1.26E-6 T 13-10-2018 ambt_18570 98042e575a403a28a440ece66a39866a 1098 Gene3D G3DSA:3.40.50.300 200 378 1.7E-44 T 13-10-2018 ambt_18570 98042e575a403a28a440ece66a39866a 1098 SUPERFAMILY SSF51306 825 947 2.96E-8 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ambt_18570 98042e575a403a28a440ece66a39866a 1098 Pfam PF00271 Helicase conserved C-terminal domain 439 535 1.1E-10 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_18570 98042e575a403a28a440ece66a39866a 1098 Gene3D G3DSA:3.30.870.10 8 188 4.7E-25 T 13-10-2018 ambt_18570 98042e575a403a28a440ece66a39866a 1098 Pfam PF13091 PLD-like domain 25 149 7.9E-11 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ambt_18570 98042e575a403a28a440ece66a39866a 1098 SMART SM00487 211 397 3.2E-21 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_18570 98042e575a403a28a440ece66a39866a 1098 SMART SM00490 457 537 1.1E-13 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_18570 98042e575a403a28a440ece66a39866a 1098 Gene3D G3DSA:3.40.50.300 381 564 1.3E-36 T 13-10-2018 ambt_18570 98042e575a403a28a440ece66a39866a 1098 SUPERFAMILY SSF52540 260 550 1.24E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_18570 98042e575a403a28a440ece66a39866a 1098 Pfam PF04851 Type III restriction enzyme, res subunit 215 362 5.8E-33 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ambt_18570 98042e575a403a28a440ece66a39866a 1098 Pfam PF11907 Domain of unknown function (DUF3427) 962 1095 6.7E-22 T 13-10-2018 IPR021835 Protein of unknown function DUF3427 ambt_18570 98042e575a403a28a440ece66a39866a 1098 Gene3D G3DSA:2.10.109.10 832 959 5.5E-9 T 13-10-2018 ambt_06115 bf5850d776501c632f7021217d3166d1 929 SUPERFAMILY SSF48452 42 156 2.53E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_06115 bf5850d776501c632f7021217d3166d1 929 SUPERFAMILY SSF52172 806 924 3.56E-34 T 13-10-2018 IPR011006 CheY-like superfamily ambt_06115 bf5850d776501c632f7021217d3166d1 929 Gene3D G3DSA:3.30.565.10 482 648 5.0E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_06115 bf5850d776501c632f7021217d3166d1 929 SUPERFAMILY SSF47384 404 484 7.65E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_06115 bf5850d776501c632f7021217d3166d1 929 Gene3D G3DSA:3.40.50.2300 788 926 1.4E-36 T 13-10-2018 ambt_06115 bf5850d776501c632f7021217d3166d1 929 Gene3D G3DSA:1.25.40.10 41 219 3.9E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_06115 bf5850d776501c632f7021217d3166d1 929 SMART SM00387 530 645 2.4E-39 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_06115 bf5850d776501c632f7021217d3166d1 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 584 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_06115 bf5850d776501c632f7021217d3166d1 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 642 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_06115 bf5850d776501c632f7021217d3166d1 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 588 598 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_06115 bf5850d776501c632f7021217d3166d1 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 623 1.6E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_06115 bf5850d776501c632f7021217d3166d1 929 SMART SM00448 808 921 6.2E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_06115 bf5850d776501c632f7021217d3166d1 929 SMART SM00448 663 781 2.2E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_06115 bf5850d776501c632f7021217d3166d1 929 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 643 6.9E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_06115 bf5850d776501c632f7021217d3166d1 929 SUPERFAMILY SSF52172 661 787 2.13E-23 T 13-10-2018 IPR011006 CheY-like superfamily ambt_06115 bf5850d776501c632f7021217d3166d1 929 Pfam PF00512 His Kinase A (phospho-acceptor) domain 418 483 2.5E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_06115 bf5850d776501c632f7021217d3166d1 929 Pfam PF00072 Response regulator receiver domain 810 919 3.6E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_06115 bf5850d776501c632f7021217d3166d1 929 Pfam PF00072 Response regulator receiver domain 665 779 2.7E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_06115 bf5850d776501c632f7021217d3166d1 929 SMART SM00388 418 483 1.4E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_06115 bf5850d776501c632f7021217d3166d1 929 Gene3D G3DSA:1.25.40.10 224 371 2.7E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_06115 bf5850d776501c632f7021217d3166d1 929 SUPERFAMILY SSF55874 472 641 1.57E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_06115 bf5850d776501c632f7021217d3166d1 929 SUPERFAMILY SSF48452 223 337 4.07E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_06115 bf5850d776501c632f7021217d3166d1 929 Gene3D G3DSA:3.40.50.2300 658 787 9.8E-23 T 13-10-2018 ambt_06115 bf5850d776501c632f7021217d3166d1 929 Gene3D G3DSA:1.10.287.130 398 481 9.7E-24 T 13-10-2018 ambt_14370 9708d1c3319768e459ba8f082294598e 168 SUPERFAMILY SSF55021 3 68 1.88E-10 T 13-10-2018 ambt_14370 9708d1c3319768e459ba8f082294598e 168 SUPERFAMILY SSF55021 84 164 1.87E-11 T 13-10-2018 ambt_14370 9708d1c3319768e459ba8f082294598e 168 Pfam PF13740 ACT domain 3 66 5.3E-9 T 13-10-2018 ambt_14370 9708d1c3319768e459ba8f082294598e 168 PIRSF PIRSF028103 1 168 1.9E-37 T 13-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 ambt_14370 9708d1c3319768e459ba8f082294598e 168 Gene3D G3DSA:3.30.70.260 81 168 2.8E-19 T 13-10-2018 ambt_14370 9708d1c3319768e459ba8f082294598e 168 Gene3D G3DSA:3.30.70.260 1 76 1.2E-15 T 13-10-2018 ambt_10780 f6b9dc4c799305d2180a42e0645e5fec 805 Gene3D G3DSA:2.170.130.10 51 171 3.6E-15 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_10780 f6b9dc4c799305d2180a42e0645e5fec 805 ProSitePatterns PS00018 EF-hand calcium-binding domain. 293 305 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_10780 f6b9dc4c799305d2180a42e0645e5fec 805 SUPERFAMILY SSF56935 34 805 1.25E-75 T 13-10-2018 ambt_10780 f6b9dc4c799305d2180a42e0645e5fec 805 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 164 1.7E-10 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_12285 1533bb30a0c25b84abf53b0550f5f583 139 Gene3D G3DSA:1.10.3680.10 1 121 2.4E-6 T 13-10-2018 IPR029024 TerB-like ambt_12285 1533bb30a0c25b84abf53b0550f5f583 139 SUPERFAMILY SSF158682 5 116 1.31E-11 T 13-10-2018 IPR029024 TerB-like ambt_12285 1533bb30a0c25b84abf53b0550f5f583 139 Pfam PF05099 Tellurite resistance protein TerB 6 111 2.0E-6 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal ambt_00145 705a3df01ad0126c686f15673cf5e0f8 143 SUPERFAMILY SSF46458 21 141 1.42E-33 T 13-10-2018 IPR009050 Globin-like superfamily ambt_00145 705a3df01ad0126c686f15673cf5e0f8 143 Pfam PF01152 Bacterial-like globin 23 140 4.0E-31 T 13-10-2018 IPR001486 Truncated hemoglobin GO:0019825 ambt_00145 705a3df01ad0126c686f15673cf5e0f8 143 Gene3D G3DSA:1.10.490.10 16 143 7.7E-40 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 SMART SM00954 235 345 1.1E-60 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 Pfam PF04607 Region found in RelA / SpoT proteins 235 344 2.5E-35 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 Gene3D G3DSA:3.10.20.30 381 456 3.3E-29 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 SUPERFAMILY SSF109604 4 188 6.91E-75 T 13-10-2018 ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 SUPERFAMILY SSF81301 181 392 1.05E-59 T 13-10-2018 ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 Pfam PF13291 ACT domain 619 696 4.9E-16 T 13-10-2018 IPR002912 ACT domain ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 SUPERFAMILY SSF55021 622 698 4.2E-9 T 13-10-2018 ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 Gene3D G3DSA:3.30.70.260 620 702 9.2E-14 T 13-10-2018 ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 SUPERFAMILY SSF81271 375 448 2.01E-19 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 695 2.9E-255 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 Pfam PF13328 HD domain 26 175 7.0E-54 T 13-10-2018 IPR003607 HD/PDEase domain ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 Gene3D G3DSA:1.10.3210.10 3 190 8.6E-81 T 13-10-2018 ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 SMART SM00471 41 153 1.4E-9 T 13-10-2018 IPR003607 HD/PDEase domain ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 Pfam PF02824 TGS domain 388 447 2.1E-19 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 ambt_18310 700b69b6858eb206c9a7575f4de3998e 702 Gene3D G3DSA:3.30.460.10 193 325 3.2E-46 T 13-10-2018 ambt_13795 80096e24d4498097d25a1958d64cadad 283 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 283 143.343 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ambt_13795 80096e24d4498097d25a1958d64cadad 283 Gene3D G3DSA:3.30.1130.10 25 143 1.4E-41 T 13-10-2018 ambt_13795 80096e24d4498097d25a1958d64cadad 283 Pfam PF14489 QueF-like protein 197 271 5.5E-27 T 13-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ambt_13795 80096e24d4498097d25a1958d64cadad 283 TIGRFAM TIGR03138 QueF: queuine synthase 15 283 2.0E-121 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ambt_13795 80096e24d4498097d25a1958d64cadad 283 SUPERFAMILY SSF55620 188 267 1.04E-7 T 13-10-2018 ambt_13795 80096e24d4498097d25a1958d64cadad 283 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 25 135 1.8E-45 T 13-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ambt_13795 80096e24d4498097d25a1958d64cadad 283 Gene3D G3DSA:3.30.1130.10 148 283 1.3E-57 T 13-10-2018 ambt_13795 80096e24d4498097d25a1958d64cadad 283 PIRSF PIRSF004750 10 283 6.2E-120 T 13-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ambt_03810 d595d3d9d21e12bbcf783764676acea8 615 Pfam PF07549 SecD/SecF GG Motif 116 140 9.0E-7 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ambt_03810 d595d3d9d21e12bbcf783764676acea8 615 Pfam PF02355 Protein export membrane protein 432 601 2.4E-20 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ambt_03810 d595d3d9d21e12bbcf783764676acea8 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 600 1.7E-150 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ambt_03810 d595d3d9d21e12bbcf783764676acea8 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 1.8E-31 T 13-10-2018 IPR027398 SecD export protein N-terminal TM domain ambt_03810 d595d3d9d21e12bbcf783764676acea8 615 SUPERFAMILY SSF82866 409 604 3.4E-45 T 13-10-2018 ambt_03810 d595d3d9d21e12bbcf783764676acea8 615 Gene3D G3DSA:3.30.70.3400 215 435 8.9E-51 T 13-10-2018 ambt_03810 d595d3d9d21e12bbcf783764676acea8 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 344 593 4.1E-83 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ambt_03810 d595d3d9d21e12bbcf783764676acea8 615 Gene3D G3DSA:3.30.1360.200 277 430 8.9E-51 T 13-10-2018 ambt_03810 d595d3d9d21e12bbcf783764676acea8 615 Gene3D G3DSA:1.20.1640.10 454 600 6.3E-8 T 13-10-2018 ambt_03810 d595d3d9d21e12bbcf783764676acea8 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 614 47.205 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ambt_19120 094062fffbfc63513c16978aa1d13f3e 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.163 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ambt_19120 094062fffbfc63513c16978aa1d13f3e 122 SMART SM01374 1 122 1.2E-85 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ambt_19120 094062fffbfc63513c16978aa1d13f3e 122 Gene3D G3DSA:2.40.150.20 1 122 5.9E-54 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 ambt_19120 094062fffbfc63513c16978aa1d13f3e 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19120 094062fffbfc63513c16978aa1d13f3e 122 SUPERFAMILY SSF50193 1 122 2.88E-51 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 ambt_19120 094062fffbfc63513c16978aa1d13f3e 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.9E-59 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 ambt_19120 094062fffbfc63513c16978aa1d13f3e 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.1E-54 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ambt_12785 4a0fe181acd57d93af376f6900040c4a 206 Gene3D G3DSA:1.10.3210.10 27 185 8.6E-19 T 13-10-2018 ambt_12785 4a0fe181acd57d93af376f6900040c4a 206 SUPERFAMILY SSF109604 2 130 1.4E-27 T 13-10-2018 ambt_12785 4a0fe181acd57d93af376f6900040c4a 206 Pfam PF01966 HD domain 53 123 1.3E-6 T 13-10-2018 IPR006674 HD domain ambt_10045 d9ead336f933133230d2da961c0189b3 257 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 122 217 7.5E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_10045 d9ead336f933133230d2da961c0189b3 257 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 36 230 5.4E-47 T 13-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 ambt_10045 d9ead336f933133230d2da961c0189b3 257 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 123 222 5.2E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_10045 d9ead336f933133230d2da961c0189b3 257 Gene3D G3DSA:3.40.50.1000 38 249 1.0E-65 T 13-10-2018 IPR023214 HAD superfamily ambt_10045 d9ead336f933133230d2da961c0189b3 257 SUPERFAMILY SSF56784 34 249 1.25E-41 T 13-10-2018 IPR036412 HAD-like superfamily ambt_10045 d9ead336f933133230d2da961c0189b3 257 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 214 227 1.1E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_10045 d9ead336f933133230d2da961c0189b3 257 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 187 207 1.1E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_10045 d9ead336f933133230d2da961c0189b3 257 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 151 1.1E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_10045 d9ead336f933133230d2da961c0189b3 257 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 169 185 1.1E-11 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_10045 d9ead336f933133230d2da961c0189b3 257 Pfam PF13419 Haloacid dehalogenase-like hydrolase 123 223 5.6E-14 T 13-10-2018 ambt_10045 d9ead336f933133230d2da961c0189b3 257 Gene3D G3DSA:1.10.150.240 49 123 1.0E-65 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 352 3.3E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 SMART SM00387 235 354 2.0E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 315 333 2.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 351 2.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 300 2.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 SUPERFAMILY SSF55785 9 106 4.01E-11 T 13-10-2018 IPR035965 PAS domain superfamily ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 Gene3D G3DSA:3.30.450.20 5 115 1.3E-21 T 13-10-2018 ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 SMART SM00091 6 74 3.0E-6 T 13-10-2018 IPR000014 PAS domain ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 119 1.6E-5 T 13-10-2018 IPR000014 PAS domain ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 Gene3D G3DSA:3.30.565.10 196 353 2.7E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 Pfam PF00989 PAS fold 8 105 1.9E-9 T 13-10-2018 IPR013767 PAS fold GO:0006355 ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 Pfam PF00512 His Kinase A (phospho-acceptor) domain 134 189 1.2E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 SUPERFAMILY SSF55874 200 352 1.7E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 Gene3D G3DSA:1.10.287.130 135 189 4.8E-15 T 13-10-2018 ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 SUPERFAMILY SSF47384 132 188 2.94E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_01475 0fa7380284c554a6dd5fe3c0be6634e1 361 SMART SM00388 132 196 2.4E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.839 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 Gene3D G3DSA:3.40.50.10860 8 276 3.4E-108 T 13-10-2018 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 1.5E-68 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 SUPERFAMILY SSF51735 123 280 2.61E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 3.4E-39 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 SUPERFAMILY SSF53223 1 122 7.39E-40 T 13-10-2018 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.3E-84 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.3E-84 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.3E-84 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.3E-84 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 2.3E-84 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 2.3E-84 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.3E-84 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ambt_04050 7012c502420d6b1ec2ad1b9de1212c67 284 Gene3D G3DSA:3.40.50.720 6 259 3.4E-108 T 13-10-2018 ambt_02830 367b4709bd7019d2ee67ee36b45d9539 354 Gene3D G3DSA:2.40.50.100 45 233 5.1E-37 T 13-10-2018 ambt_02830 367b4709bd7019d2ee67ee36b45d9539 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 142 272 5.6E-8 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_02830 367b4709bd7019d2ee67ee36b45d9539 354 Gene3D G3DSA:1.10.287.470 77 199 5.1E-37 T 13-10-2018 ambt_02830 367b4709bd7019d2ee67ee36b45d9539 354 Pfam PF13533 Biotin-lipoyl like 43 88 1.2E-15 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ambt_02830 367b4709bd7019d2ee67ee36b45d9539 354 SUPERFAMILY SSF111369 43 103 2.48E-10 T 13-10-2018 ambt_02830 367b4709bd7019d2ee67ee36b45d9539 354 SUPERFAMILY SSF111369 107 246 4.18E-8 T 13-10-2018 ambt_02830 367b4709bd7019d2ee67ee36b45d9539 354 Gene3D G3DSA:2.40.30.170 234 310 5.1E-37 T 13-10-2018 ambt_21475 97c515a5ac5b3e4ae1ff10c3b8f31111 564 PIRSF PIRSF006281 17 564 1.3E-163 T 13-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD ambt_21475 97c515a5ac5b3e4ae1ff10c3b8f31111 564 Gene3D G3DSA:2.60.40.10 437 564 4.3E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_21475 97c515a5ac5b3e4ae1ff10c3b8f31111 564 SUPERFAMILY SSF81296 437 563 4.06E-16 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_21475 97c515a5ac5b3e4ae1ff10c3b8f31111 564 Gene3D G3DSA:2.70.98.10 64 436 5.8E-148 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 ambt_21475 97c515a5ac5b3e4ae1ff10c3b8f31111 564 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 66 561 5.7E-177 T 13-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 ambt_21475 97c515a5ac5b3e4ae1ff10c3b8f31111 564 SUPERFAMILY SSF74650 67 434 2.67E-132 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SUPERFAMILY SSF49373 471 545 1.14E-9 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 Gene3D G3DSA:2.60.40.10 466 552 4.4E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 Gene3D G3DSA:2.60.40.10 363 451 1.7E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 Gene3D G3DSA:2.60.40.10 555 650 1.5E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 Gene3D G3DSA:2.60.40.10 261 362 8.3E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 Gene3D G3DSA:2.60.40.10 158 257 2.8E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 Gene3D G3DSA:2.60.40.10 44 149 3.5E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SUPERFAMILY SSF49373 380 450 8.24E-12 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SUPERFAMILY SSF49373 65 146 7.26E-7 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SUPERFAMILY SSF49373 178 254 3.66E-8 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SUPERFAMILY SSF49373 270 361 9.22E-8 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SUPERFAMILY SSF49373 564 648 5.23E-10 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 Pfam PF02369 Bacterial Ig-like domain (group 1) 377 447 1.4E-7 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 Pfam PF02369 Bacterial Ig-like domain (group 1) 570 647 1.7E-10 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SMART SM00634 367 452 0.01 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SMART SM00634 50 146 0.024 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SMART SM00634 157 255 0.016 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SMART SM00634 456 543 0.46 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SMART SM00634 269 361 0.093 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ambt_10130 4e527bb8b39e04a52ca1a3b4fb718a0f 845 SMART SM00634 556 649 1.2E-5 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ambt_08820 95c7802ba641dcbbffb88acca2f18690 741 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 166 2.0E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_08820 95c7802ba641dcbbffb88acca2f18690 741 Gene3D G3DSA:2.170.130.10 54 176 2.4E-23 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_08820 95c7802ba641dcbbffb88acca2f18690 741 SUPERFAMILY SSF56935 38 741 3.87E-118 T 13-10-2018 ambt_08820 95c7802ba641dcbbffb88acca2f18690 741 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 73 741 3.7E-85 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ambt_08820 95c7802ba641dcbbffb88acca2f18690 741 Gene3D G3DSA:2.40.170.20 178 741 2.8E-112 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_08820 95c7802ba641dcbbffb88acca2f18690 741 Pfam PF00593 TonB dependent receptor 239 740 1.2E-51 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_10495 a8755ce6b186d94e65273f6becfbc6c1 309 Gene3D G3DSA:3.90.550.10 2 183 3.6E-28 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_10495 a8755ce6b186d94e65273f6becfbc6c1 309 Pfam PF00535 Glycosyl transferase family 2 6 165 1.2E-29 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_10495 a8755ce6b186d94e65273f6becfbc6c1 309 SUPERFAMILY SSF53448 3 252 4.78E-32 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 Pfam PF12137 RNA polymerase recycling family C-terminal 587 940 4.2E-119 T 13-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 Gene3D G3DSA:2.30.30.930 59 117 2.9E-20 T 13-10-2018 ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 SMART SM00487 153 346 4.7E-18 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 SMART SM00490 499 583 1.6E-13 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 Pfam PF00271 Helicase conserved C-terminal domain 476 583 4.8E-13 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 Gene3D G3DSA:3.40.50.10810 153 425 1.6E-92 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 SUPERFAMILY SSF52540 156 377 5.9E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 Pfam PF00176 SNF2 family N-terminal domain 132 353 9.0E-17 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 Gene3D G3DSA:3.30.360.80 695 767 9.4E-24 T 13-10-2018 ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 5 941 27.55 T 13-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 Gene3D G3DSA:3.40.50.300 426 615 1.4E-38 T 13-10-2018 ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 SUPERFAMILY SSF52540 277 625 2.88E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15350 cc6c762fdbfd887a4d3cc24b46d78452 942 Gene3D G3DSA:2.30.30.140 5 57 2.4E-21 T 13-10-2018 ambt_21550 7f97d71c3cde00d6d73f666e5f7e3649 369 SUPERFAMILY SSF53335 6 354 1.34E-60 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_21550 7f97d71c3cde00d6d73f666e5f7e3649 369 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 53 65 - T 13-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 ambt_21550 7f97d71c3cde00d6d73f666e5f7e3649 369 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 353 8.2E-41 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ambt_21550 7f97d71c3cde00d6d73f666e5f7e3649 369 Gene3D G3DSA:3.40.50.150 1 195 4.4E-36 T 13-10-2018 ambt_21550 7f97d71c3cde00d6d73f666e5f7e3649 369 Gene3D G3DSA:3.90.120.10 205 346 5.9E-6 T 13-10-2018 ambt_21550 7f97d71c3cde00d6d73f666e5f7e3649 369 Pfam PF00145 C-5 cytosine-specific DNA methylase 9 354 9.2E-45 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ambt_04300 576c17e5d822d3855b86576e8fd0f894 212 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 9 212 38.107 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ambt_04300 576c17e5d822d3855b86576e8fd0f894 212 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 13-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ambt_04300 576c17e5d822d3855b86576e8fd0f894 212 PIRSF PIRSF000190 1 212 2.8E-80 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ambt_04300 576c17e5d822d3855b86576e8fd0f894 212 SUPERFAMILY SSF50475 15 212 2.14E-62 T 13-10-2018 ambt_04300 576c17e5d822d3855b86576e8fd0f894 212 Gene3D G3DSA:2.30.110.10 1 212 4.5E-77 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ambt_04300 576c17e5d822d3855b86576e8fd0f894 212 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 32 115 1.8E-19 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ambt_04300 576c17e5d822d3855b86576e8fd0f894 212 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 212 1.8E-85 T 13-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ambt_04300 576c17e5d822d3855b86576e8fd0f894 212 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 212 2.7E-20 T 13-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ambt_12045 70abe9e807837bb0d40b1118e8d1d911 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 5.0E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_12045 70abe9e807837bb0d40b1118e8d1d911 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 5.0E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_12045 70abe9e807837bb0d40b1118e8d1d911 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 5.0E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_12045 70abe9e807837bb0d40b1118e8d1d911 256 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 5.0E-20 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_12045 70abe9e807837bb0d40b1118e8d1d911 256 Pfam PF00557 Metallopeptidase family M24 13 242 3.6E-52 T 13-10-2018 IPR000994 Peptidase M24 ambt_12045 70abe9e807837bb0d40b1118e8d1d911 256 Gene3D G3DSA:3.90.230.10 3 256 4.9E-102 T 13-10-2018 ambt_12045 70abe9e807837bb0d40b1118e8d1d911 256 SUPERFAMILY SSF55920 4 254 3.66E-87 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like ambt_12045 70abe9e807837bb0d40b1118e8d1d911 256 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 37.92 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_12045 70abe9e807837bb0d40b1118e8d1d911 256 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 250 3.6E-90 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_12045 70abe9e807837bb0d40b1118e8d1d911 256 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_14330 121310c737542f9f2261c29cc97b501e 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 175 1.5E-30 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_14330 121310c737542f9f2261c29cc97b501e 176 Gene3D G3DSA:1.10.1740.10 3 114 8.4E-28 T 13-10-2018 ambt_14330 121310c737542f9f2261c29cc97b501e 176 Pfam PF04542 Sigma-70 region 2 24 90 2.7E-15 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_14330 121310c737542f9f2261c29cc97b501e 176 Gene3D G3DSA:1.10.10.10 115 176 3.4E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_14330 121310c737542f9f2261c29cc97b501e 176 SUPERFAMILY SSF88659 111 174 2.83E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_14330 121310c737542f9f2261c29cc97b501e 176 SUPERFAMILY SSF88946 5 101 2.16E-24 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_14330 121310c737542f9f2261c29cc97b501e 176 Pfam PF08281 Sigma-70, region 4 119 171 5.1E-14 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_13460 70c575892cc696a464cae1874d08fb94 407 Gene3D G3DSA:1.20.1330.10 37 215 2.5E-31 T 13-10-2018 ambt_13460 70c575892cc696a464cae1874d08fb94 407 Gene3D G3DSA:1.20.1330.10 227 383 1.4E-9 T 13-10-2018 ambt_13460 70c575892cc696a464cae1874d08fb94 407 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 5.7E-26 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ambt_13460 70c575892cc696a464cae1874d08fb94 407 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 407 5.8E-81 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 ambt_13460 70c575892cc696a464cae1874d08fb94 407 Pfam PF00700 Bacterial flagellin C-terminal helical region 327 407 2.5E-8 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ambt_13460 70c575892cc696a464cae1874d08fb94 407 SUPERFAMILY SSF64518 1 407 6.15E-74 T 13-10-2018 ambt_01590 0b99e348de47f7564bb5397f71183e05 148 Gene3D G3DSA:3.30.530.20 2 145 2.8E-30 T 13-10-2018 IPR023393 START-like domain superfamily ambt_01590 0b99e348de47f7564bb5397f71183e05 148 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 12 141 3.5E-21 T 13-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ambt_01590 0b99e348de47f7564bb5397f71183e05 148 SUPERFAMILY SSF55961 2 143 4.34E-29 T 13-10-2018 ambt_19470 24a1d77546e40dd0c68aeafad5279f3e 382 PRINTS PR00481 Cytosol aminopeptidase signature 163 184 2.1E-46 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_19470 24a1d77546e40dd0c68aeafad5279f3e 382 PRINTS PR00481 Cytosol aminopeptidase signature 222 242 2.1E-46 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_19470 24a1d77546e40dd0c68aeafad5279f3e 382 PRINTS PR00481 Cytosol aminopeptidase signature 250 265 2.1E-46 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_19470 24a1d77546e40dd0c68aeafad5279f3e 382 PRINTS PR00481 Cytosol aminopeptidase signature 141 158 2.1E-46 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_19470 24a1d77546e40dd0c68aeafad5279f3e 382 PRINTS PR00481 Cytosol aminopeptidase signature 200 221 2.1E-46 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_19470 24a1d77546e40dd0c68aeafad5279f3e 382 Gene3D G3DSA:3.40.630.10 46 381 8.9E-103 T 13-10-2018 ambt_19470 24a1d77546e40dd0c68aeafad5279f3e 382 Pfam PF12404 Peptidase 2 33 9.4E-8 T 13-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 ambt_19470 24a1d77546e40dd0c68aeafad5279f3e 382 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 60 374 2.2E-97 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ambt_19470 24a1d77546e40dd0c68aeafad5279f3e 382 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 226 233 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ambt_19470 24a1d77546e40dd0c68aeafad5279f3e 382 SUPERFAMILY SSF53187 56 380 3.45E-96 T 13-10-2018 ambt_05560 b45afa15c02048db2f6fb0371e8e8396 237 Gene3D G3DSA:3.40.50.2300 1 124 4.5E-37 T 13-10-2018 ambt_05560 b45afa15c02048db2f6fb0371e8e8396 237 SUPERFAMILY SSF46894 138 230 2.44E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_05560 b45afa15c02048db2f6fb0371e8e8396 237 Gene3D G3DSA:1.10.10.10 125 234 1.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_05560 b45afa15c02048db2f6fb0371e8e8396 237 SUPERFAMILY SSF52172 3 130 1.57E-39 T 13-10-2018 IPR011006 CheY-like superfamily ambt_05560 b45afa15c02048db2f6fb0371e8e8396 237 SMART SM00448 6 117 1.1E-41 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05560 b45afa15c02048db2f6fb0371e8e8396 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 230 4.0E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_05560 b45afa15c02048db2f6fb0371e8e8396 237 SMART SM00862 155 230 9.0E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_05560 b45afa15c02048db2f6fb0371e8e8396 237 Pfam PF00072 Response regulator receiver domain 8 117 2.8E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12560 fd84758ff0aab66c572bbaad107e82f5 315 SUPERFAMILY SSF53474 6 190 3.25E-28 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_12560 fd84758ff0aab66c572bbaad107e82f5 315 SUPERFAMILY SSF48452 228 298 1.14E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12560 fd84758ff0aab66c572bbaad107e82f5 315 Gene3D G3DSA:3.40.50.1820 1 222 1.3E-38 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_12560 fd84758ff0aab66c572bbaad107e82f5 315 Gene3D G3DSA:1.25.40.10 223 315 5.6E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12560 fd84758ff0aab66c572bbaad107e82f5 315 Pfam PF00756 Putative esterase 4 125 5.2E-16 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 ambt_12560 fd84758ff0aab66c572bbaad107e82f5 315 Pfam PF14559 Tetratricopeptide repeat 239 289 6.4E-7 T 13-10-2018 ambt_12560 fd84758ff0aab66c572bbaad107e82f5 315 SMART SM00028 261 294 3.5E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12560 fd84758ff0aab66c572bbaad107e82f5 315 SMART SM00028 227 260 130.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_19335 6cc692a97f9e80bad62d4b1b20948c74 305 SUPERFAMILY SSF56059 129 303 1.14E-20 T 13-10-2018 ambt_19335 6cc692a97f9e80bad62d4b1b20948c74 305 Pfam PF08443 RimK-like ATP-grasp domain 139 302 2.6E-5 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 ambt_19335 6cc692a97f9e80bad62d4b1b20948c74 305 Gene3D G3DSA:3.30.470.20 202 305 9.3E-14 T 13-10-2018 ambt_04080 2fb49a1ccb4d2df4bed1b1abb2566e4b 630 Gene3D G3DSA:1.10.4030.30 42 228 4.2E-18 T 13-10-2018 ambt_04080 2fb49a1ccb4d2df4bed1b1abb2566e4b 630 Gene3D G3DSA:3.10.50.40 269 368 1.9E-35 T 13-10-2018 ambt_04080 2fb49a1ccb4d2df4bed1b1abb2566e4b 630 Gene3D G3DSA:3.10.50.40 229 239 4.2E-18 T 13-10-2018 ambt_04080 2fb49a1ccb4d2df4bed1b1abb2566e4b 630 SUPERFAMILY SSF109998 41 242 1.57E-34 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily ambt_04080 2fb49a1ccb4d2df4bed1b1abb2566e4b 630 Gene3D G3DSA:1.10.4030.30 241 379 1.9E-35 T 13-10-2018 ambt_04080 2fb49a1ccb4d2df4bed1b1abb2566e4b 630 SUPERFAMILY SSF54534 266 369 6.34E-28 T 13-10-2018 ambt_04080 2fb49a1ccb4d2df4bed1b1abb2566e4b 630 Pfam PF13624 SurA N-terminal domain 1 165 1.2E-46 T 13-10-2018 ambt_04080 2fb49a1ccb4d2df4bed1b1abb2566e4b 630 Pfam PF13616 PPIC-type PPIASE domain 267 366 4.2E-29 T 13-10-2018 ambt_15220 9995f0841368c176c82ef89f9530c9e2 408 Gene3D G3DSA:3.40.50.150 218 408 6.3E-46 T 13-10-2018 ambt_15220 9995f0841368c176c82ef89f9530c9e2 408 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 407 46.12 T 13-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 ambt_15220 9995f0841368c176c82ef89f9530c9e2 408 SUPERFAMILY SSF53335 231 378 2.84E-24 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_15220 9995f0841368c176c82ef89f9530c9e2 408 Gene3D G3DSA:3.40.50.150 8 208 1.1E-52 T 13-10-2018 ambt_15220 9995f0841368c176c82ef89f9530c9e2 408 PIRSF PIRSF037565 1 408 4.5E-133 T 13-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 ambt_15220 9995f0841368c176c82ef89f9530c9e2 408 Pfam PF05175 Methyltransferase small domain 231 403 5.8E-46 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ambt_19240 d9c68678a5467ed53126d6a6c585387b 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 13-10-2018 IPR019844 Cold-shock conserved site ambt_19240 d9c68678a5467ed53126d6a6c585387b 69 SMART SM00357 5 69 9.7E-31 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 ambt_19240 d9c68678a5467ed53126d6a6c585387b 69 PIRSF PIRSF002599 1 69 1.5E-25 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 ambt_19240 d9c68678a5467ed53126d6a6c585387b 69 PRINTS PR00050 Cold shock protein signature 42 60 6.3E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_19240 d9c68678a5467ed53126d6a6c585387b 69 PRINTS PR00050 Cold shock protein signature 27 36 6.3E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_19240 d9c68678a5467ed53126d6a6c585387b 69 PRINTS PR00050 Cold shock protein signature 6 21 6.3E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_19240 d9c68678a5467ed53126d6a6c585387b 69 Gene3D G3DSA:2.40.50.140 1 68 5.4E-31 T 13-10-2018 ambt_19240 d9c68678a5467ed53126d6a6c585387b 69 Pfam PF00313 'Cold-shock' DNA-binding domain 4 68 4.1E-30 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_19240 d9c68678a5467ed53126d6a6c585387b 69 SUPERFAMILY SSF50249 3 68 2.03E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_07640 dea8bc44fa8b2a5069168927c2eff16f 136 Pfam PF00588 SpoU rRNA Methylase family 22 106 2.4E-11 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ambt_07640 dea8bc44fa8b2a5069168927c2eff16f 136 SUPERFAMILY SSF75217 8 111 3.77E-18 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases ambt_07640 dea8bc44fa8b2a5069168927c2eff16f 136 Gene3D G3DSA:3.40.1280.10 8 116 1.0E-12 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ambt_14985 00bcf2580f6364cce43e22b0984b21e3 200 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.684 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ambt_14985 00bcf2580f6364cce43e22b0984b21e3 200 SMART SM01207 10 185 3.1E-78 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ambt_14985 00bcf2580f6364cce43e22b0984b21e3 200 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 9.9E-49 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ambt_14985 00bcf2580f6364cce43e22b0984b21e3 200 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 4 195 1.3E-66 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ambt_16515 ae449e54dbd109f5a8397fd6cfb22984 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 2.9E-39 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 ambt_16515 ae449e54dbd109f5a8397fd6cfb22984 110 Gene3D G3DSA:3.90.470.10 1 110 7.3E-46 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 ambt_16515 ae449e54dbd109f5a8397fd6cfb22984 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.3E-49 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_16515 ae449e54dbd109f5a8397fd6cfb22984 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16515 ae449e54dbd109f5a8397fd6cfb22984 110 SUPERFAMILY SSF54843 1 109 1.19E-43 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 ambt_16515 ae449e54dbd109f5a8397fd6cfb22984 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.947 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_04200 a2d77c6345dcc4d674ad0a1d137c375f 171 Gene3D G3DSA:3.30.700.10 9 161 6.0E-9 T 13-10-2018 ambt_04200 a2d77c6345dcc4d674ad0a1d137c375f 171 SUPERFAMILY SSF54523 9 129 5.96E-11 T 13-10-2018 ambt_04200 a2d77c6345dcc4d674ad0a1d137c375f 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.2E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_12765 49eaf9c1e0af26d8d962f87392791930 185 Gene3D G3DSA:1.10.1740.10 12 118 4.3E-13 T 13-10-2018 ambt_12765 49eaf9c1e0af26d8d962f87392791930 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 175 1.8E-23 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_12765 49eaf9c1e0af26d8d962f87392791930 185 Gene3D G3DSA:1.10.10.10 119 180 1.0E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_12765 49eaf9c1e0af26d8d962f87392791930 185 SUPERFAMILY SSF88659 117 175 1.42E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_12765 49eaf9c1e0af26d8d962f87392791930 185 Pfam PF08281 Sigma-70, region 4 126 173 5.8E-15 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_12765 49eaf9c1e0af26d8d962f87392791930 185 SUPERFAMILY SSF88946 14 102 5.1E-17 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_12765 49eaf9c1e0af26d8d962f87392791930 185 Pfam PF04542 Sigma-70 region 2 38 95 4.8E-7 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_07345 b27c75e03ff96878eea23a110b762f41 121 Pfam PF12487 Protein of unknown function (DUF3703) 6 112 7.5E-40 T 13-10-2018 IPR022172 Protein of unknown function DUF3703 ambt_13865 b9477160506a62c289357d8df7ee20dc 224 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_13865 b9477160506a62c289357d8df7ee20dc 224 Gene3D G3DSA:3.40.50.300 1 223 2.0E-37 T 13-10-2018 ambt_13865 b9477160506a62c289357d8df7ee20dc 224 Pfam PF00005 ABC transporter 22 152 3.5E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_13865 b9477160506a62c289357d8df7ee20dc 224 SUPERFAMILY SSF52540 2 209 2.82E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13865 b9477160506a62c289357d8df7ee20dc 224 SMART SM00382 30 214 3.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 Pfam PF00364 Biotin-requiring enzyme 624 688 6.8E-14 T 13-10-2018 IPR000089 Biotin/lipoyl attachment ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.3E-45 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 SUPERFAMILY SSF51246 331 473 1.57E-35 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 SUPERFAMILY SSF52440 1 113 3.88E-50 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 SUPERFAMILY SSF51230 617 689 4.19E-20 T 13-10-2018 IPR011053 Single hybrid motif ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 6.7E-74 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 Pfam PF02785 Biotin carboxylase C-terminal domain 336 466 1.0E-32 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 Gene3D G3DSA:2.40.50.100 626 690 2.7E-20 T 13-10-2018 ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 SMART SM00878 336 466 3.7E-46 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 SUPERFAMILY SSF56059 83 348 1.27E-68 T 13-10-2018 ambt_10295 f2c59c49e7104405323741ea3f8bdf0c 696 Gene3D G3DSA:3.30.470.130 1 474 2.2E-195 T 13-10-2018 ambt_21210 620b8ef847ec04fb9ae5f3d4d6c9ab30 301 PRINTS PR00478 Phosphoribulokinase family signature 126 144 7.2E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 ambt_21210 620b8ef847ec04fb9ae5f3d4d6c9ab30 301 PRINTS PR00478 Phosphoribulokinase family signature 182 205 7.2E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 ambt_21210 620b8ef847ec04fb9ae5f3d4d6c9ab30 301 PRINTS PR00478 Phosphoribulokinase family signature 12 29 7.2E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 ambt_21210 620b8ef847ec04fb9ae5f3d4d6c9ab30 301 PRINTS PR00478 Phosphoribulokinase family signature 164 181 7.2E-27 T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 ambt_21210 620b8ef847ec04fb9ae5f3d4d6c9ab30 301 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 1.0E-69 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 ambt_21210 620b8ef847ec04fb9ae5f3d4d6c9ab30 301 Gene3D G3DSA:3.40.50.300 1 290 1.2E-112 T 13-10-2018 ambt_21210 620b8ef847ec04fb9ae5f3d4d6c9ab30 301 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 13-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 ambt_21210 620b8ef847ec04fb9ae5f3d4d6c9ab30 301 SUPERFAMILY SSF52540 4 286 6.57E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_06840 421fe38b4c3af9424ae62532f2ed7a49 222 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_06840 421fe38b4c3af9424ae62532f2ed7a49 222 Gene3D G3DSA:3.40.50.300 1 221 1.8E-52 T 13-10-2018 ambt_06840 421fe38b4c3af9424ae62532f2ed7a49 222 SMART SM00382 26 221 1.2E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_06840 421fe38b4c3af9424ae62532f2ed7a49 222 Pfam PF00005 ABC transporter 18 173 3.7E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_06840 421fe38b4c3af9424ae62532f2ed7a49 222 SUPERFAMILY SSF52540 4 212 3.92E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_08025 33c6d6cb8044c76361dee0b34c6b064e 679 SMART SM00245 329 535 2.5E-61 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ambt_08025 33c6d6cb8044c76361dee0b34c6b064e 679 SMART SM00228 248 325 1.2E-12 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_08025 33c6d6cb8044c76361dee0b34c6b064e 679 Pfam PF03572 Peptidase family S41 365 532 2.1E-51 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ambt_08025 33c6d6cb8044c76361dee0b34c6b064e 679 Gene3D G3DSA:2.30.42.10 237 324 2.2E-15 T 13-10-2018 ambt_08025 33c6d6cb8044c76361dee0b34c6b064e 679 Gene3D G3DSA:3.90.226.10 328 553 1.2E-57 T 13-10-2018 ambt_08025 33c6d6cb8044c76361dee0b34c6b064e 679 SUPERFAMILY SSF52096 168 552 1.36E-68 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_08025 33c6d6cb8044c76361dee0b34c6b064e 679 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 322 8.3E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_08025 33c6d6cb8044c76361dee0b34c6b064e 679 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 202 555 1.1E-103 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 ambt_08025 33c6d6cb8044c76361dee0b34c6b064e 679 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 539 671 1.9E-37 T 13-10-2018 IPR020992 Tail specific protease, C-terminal ambt_08025 33c6d6cb8044c76361dee0b34c6b064e 679 SUPERFAMILY SSF50156 238 323 1.41E-12 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 ambt_13095 aa2fdfe9ceace9a210b176ba9ce9e384 149 Gene3D G3DSA:1.10.10.10 56 99 1.1E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_13095 aa2fdfe9ceace9a210b176ba9ce9e384 149 Gene3D G3DSA:1.10.10.10 101 147 5.3E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_13095 aa2fdfe9ceace9a210b176ba9ce9e384 149 Hamap MF_01114 Regulatory protein RecX [recX]. 1 149 11.789 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 ambt_13095 aa2fdfe9ceace9a210b176ba9ce9e384 149 Pfam PF02631 RecX family 31 147 3.5E-23 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 ambt_13095 aa2fdfe9ceace9a210b176ba9ce9e384 149 Gene3D G3DSA:1.10.10.10 9 54 8.9E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_16035 ed9de1d8b1f36770c47411dac50da89b 321 Gene3D G3DSA:3.40.50.1820 23 321 1.1E-46 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_16035 ed9de1d8b1f36770c47411dac50da89b 321 Pfam PF12146 Serine aminopeptidase, S33 49 305 1.2E-52 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 ambt_16035 ed9de1d8b1f36770c47411dac50da89b 321 SUPERFAMILY SSF53474 24 320 9.36E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 613 2.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 632 2.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 588 2.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 574 2.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 Gene3D G3DSA:3.30.565.10 478 637 1.8E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 Pfam PF13426 PAS domain 157 258 1.1E-11 T 13-10-2018 IPR000014 PAS domain ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 524 633 7.9E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 Pfam PF00512 His Kinase A (phospho-acceptor) domain 412 476 1.0E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SUPERFAMILY SSF47384 396 478 1.16E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SMART SM00388 412 477 1.5E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 Pfam PF08448 PAS fold 279 393 1.8E-8 T 13-10-2018 IPR013656 PAS fold-4 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 Gene3D G3DSA:1.10.287.130 395 475 3.5E-24 T 13-10-2018 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SUPERFAMILY SSF55785 158 257 7.68E-18 T 13-10-2018 IPR035965 PAS domain superfamily ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SMART SM00448 800 912 5.9E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 Pfam PF00072 Response regulator receiver domain 803 912 1.4E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SUPERFAMILY SSF55874 466 637 6.42E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SUPERFAMILY SSF55785 256 387 3.49E-18 T 13-10-2018 IPR035965 PAS domain superfamily ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SMART SM00387 524 635 3.9E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SUPERFAMILY SSF52172 799 941 1.71E-30 T 13-10-2018 IPR011006 CheY-like superfamily ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 272 399 2.6E-13 T 13-10-2018 IPR000014 PAS domain ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 267 4.4E-9 T 13-10-2018 IPR000014 PAS domain ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 Gene3D G3DSA:3.40.50.2300 791 928 3.1E-29 T 13-10-2018 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 Gene3D G3DSA:3.30.450.20 269 394 2.8E-18 T 13-10-2018 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 Gene3D G3DSA:3.30.450.20 150 268 5.3E-20 T 13-10-2018 ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SMART SM00086 350 392 0.089 T 13-10-2018 IPR001610 PAC motif ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SMART SM00086 218 260 7.6 T 13-10-2018 IPR001610 PAC motif ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SMART SM00091 272 339 1.3E-5 T 13-10-2018 IPR000014 PAS domain ambt_14860 85a57861531205ad94cc2542f5d4b35e 1107 SMART SM00091 142 213 1.2 T 13-10-2018 IPR000014 PAS domain ambt_16705 79a3f0af724f19a1ffc6d65dd35f2568 294 Hamap MF_00188 Protease HtpX [htpX]. 1 290 26.529 T 13-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 ambt_16705 79a3f0af724f19a1ffc6d65dd35f2568 294 Gene3D G3DSA:3.30.2010.10 68 161 4.4E-35 T 13-10-2018 ambt_16705 79a3f0af724f19a1ffc6d65dd35f2568 294 Pfam PF01435 Peptidase family M48 79 290 1.3E-42 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ambt_12970 12ad3881cd7a0c49a87e993011f301f3 981 Pfam PF13620 Carboxypeptidase regulatory-like domain 36 111 1.3E-18 T 13-10-2018 ambt_12970 12ad3881cd7a0c49a87e993011f301f3 981 Gene3D G3DSA:2.60.40.1120 32 113 4.1E-13 T 13-10-2018 ambt_12970 12ad3881cd7a0c49a87e993011f301f3 981 SUPERFAMILY SSF56935 115 981 2.12E-63 T 13-10-2018 ambt_12970 12ad3881cd7a0c49a87e993011f301f3 981 Gene3D G3DSA:2.170.130.10 118 235 1.4E-5 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_12970 12ad3881cd7a0c49a87e993011f301f3 981 Pfam PF00593 TonB dependent receptor 335 980 2.9E-9 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_12970 12ad3881cd7a0c49a87e993011f301f3 981 SUPERFAMILY SSF49452 26 111 1.86E-12 T 13-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 ambt_12970 12ad3881cd7a0c49a87e993011f301f3 981 Pfam PF07715 TonB-dependent Receptor Plug Domain 142 232 8.4E-6 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_07190 dc5b46c6a82c45dc7b76365d1c4b6045 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 311 1.2E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_07190 dc5b46c6a82c45dc7b76365d1c4b6045 465 SMART SM00304 191 244 1.4E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_07190 dc5b46c6a82c45dc7b76365d1c4b6045 465 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 11 462 9.6E-132 T 13-10-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 ambt_07190 dc5b46c6a82c45dc7b76365d1c4b6045 465 SMART SM00388 245 311 6.1E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_07190 dc5b46c6a82c45dc7b76365d1c4b6045 465 Gene3D G3DSA:3.30.565.10 316 465 2.2E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_07190 dc5b46c6a82c45dc7b76365d1c4b6045 465 Gene3D G3DSA:1.10.287.130 195 311 2.1E-25 T 13-10-2018 ambt_07190 dc5b46c6a82c45dc7b76365d1c4b6045 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 461 1.2E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_07190 dc5b46c6a82c45dc7b76365d1c4b6045 465 SUPERFAMILY SSF47384 228 311 6.08E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_07190 dc5b46c6a82c45dc7b76365d1c4b6045 465 SMART SM00387 355 465 1.1E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_07190 dc5b46c6a82c45dc7b76365d1c4b6045 465 SUPERFAMILY SSF158472 194 241 1.96E-5 T 13-10-2018 ambt_07190 dc5b46c6a82c45dc7b76365d1c4b6045 465 SUPERFAMILY SSF55874 300 462 1.09E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_18730 ca3ad05849c010883c28f779591d37ab 132 Pfam PF01467 Cytidylyltransferase-like 6 124 8.8E-20 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ambt_18730 ca3ad05849c010883c28f779591d37ab 132 SUPERFAMILY SSF52374 2 127 1.13E-31 T 13-10-2018 ambt_18730 ca3ad05849c010883c28f779591d37ab 132 Gene3D G3DSA:3.40.50.620 1 129 3.9E-39 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_18730 ca3ad05849c010883c28f779591d37ab 132 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 67 1.1E-17 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ambt_03260 aee1d3ae9acce72f77ac88a87f4d8ff1 498 SUPERFAMILY SSF56059 86 261 1.64E-31 T 13-10-2018 ambt_03260 aee1d3ae9acce72f77ac88a87f4d8ff1 498 Pfam PF08443 RimK-like ATP-grasp domain 101 243 8.7E-13 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 ambt_03260 aee1d3ae9acce72f77ac88a87f4d8ff1 498 Gene3D G3DSA:3.30.470.20 179 275 3.0E-16 T 13-10-2018 ambt_03260 aee1d3ae9acce72f77ac88a87f4d8ff1 498 Gene3D G3DSA:3.30.1490.20 96 175 4.2E-6 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ambt_21220 d6fab0674a8754904600fca68d8c9e33 95 Pfam PF01527 Transposase 3 71 3.0E-16 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ambt_21220 d6fab0674a8754904600fca68d8c9e33 95 Gene3D G3DSA:1.10.10.60 6 82 9.2E-13 T 13-10-2018 ambt_21220 d6fab0674a8754904600fca68d8c9e33 95 SUPERFAMILY SSF46689 2 85 4.66E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_03815 59a096ff1539b0c7f081fab4f3632180 313 Gene3D G3DSA:1.20.1640.10 96 296 4.5E-13 T 13-10-2018 ambt_03815 59a096ff1539b0c7f081fab4f3632180 313 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 27.981 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ambt_03815 59a096ff1539b0c7f081fab4f3632180 313 SUPERFAMILY SSF82866 72 290 2.22E-41 T 13-10-2018 ambt_03815 59a096ff1539b0c7f081fab4f3632180 313 Pfam PF02355 Protein export membrane protein 110 290 3.1E-67 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ambt_03815 59a096ff1539b0c7f081fab4f3632180 313 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 105 280 3.7E-54 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ambt_03815 59a096ff1539b0c7f081fab4f3632180 313 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 3.0E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ambt_03815 59a096ff1539b0c7f081fab4f3632180 313 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 3.0E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ambt_03815 59a096ff1539b0c7f081fab4f3632180 313 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 3.0E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ambt_03815 59a096ff1539b0c7f081fab4f3632180 313 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 3.0E-32 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ambt_03815 59a096ff1539b0c7f081fab4f3632180 313 Pfam PF07549 SecD/SecF GG Motif 32 58 3.1E-9 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ambt_03815 59a096ff1539b0c7f081fab4f3632180 313 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 283 5.4E-85 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ambt_12710 3b815c7c1565c9ad3e3a6c172ab2ae85 418 Gene3D G3DSA:2.40.30.170 67 345 2.1E-37 T 13-10-2018 ambt_12710 3b815c7c1565c9ad3e3a6c172ab2ae85 418 Pfam PF13437 HlyD family secretion protein 238 325 2.2E-10 T 13-10-2018 ambt_12710 3b815c7c1565c9ad3e3a6c172ab2ae85 418 Gene3D G3DSA:2.40.420.20 63 403 2.1E-37 T 13-10-2018 ambt_12710 3b815c7c1565c9ad3e3a6c172ab2ae85 418 Gene3D G3DSA:2.40.50.100 78 272 2.1E-37 T 13-10-2018 ambt_12710 3b815c7c1565c9ad3e3a6c172ab2ae85 418 Gene3D G3DSA:1.10.287.470 111 238 2.1E-37 T 13-10-2018 ambt_16615 46dcb2dfbf9be59c11377b283857e0b4 312 SUPERFAMILY SSF51658 61 298 2.63E-54 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily ambt_16615 46dcb2dfbf9be59c11377b283857e0b4 312 Pfam PF01261 Xylose isomerase-like TIM barrel 127 257 5.8E-19 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ambt_16615 46dcb2dfbf9be59c11377b283857e0b4 312 Gene3D G3DSA:3.20.20.150 56 305 8.3E-46 T 13-10-2018 ambt_06815 b4e6992c4dded3f287d962890de53738 791 Gene3D G3DSA:2.40.170.20 184 791 8.2E-60 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_06815 b4e6992c4dded3f287d962890de53738 791 Pfam PF07715 TonB-dependent Receptor Plug Domain 73 170 7.4E-10 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_06815 b4e6992c4dded3f287d962890de53738 791 Gene3D G3DSA:2.170.130.10 68 182 1.1E-14 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_06815 b4e6992c4dded3f287d962890de53738 791 SUPERFAMILY SSF56935 40 791 6.26E-85 T 13-10-2018 ambt_06815 b4e6992c4dded3f287d962890de53738 791 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 774 791 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site ambt_14785 1a557dedbb74b5aec970f1e4daaf3c2f 744 Pfam PF04453 Organic solvent tolerance protein 293 653 6.2E-90 T 13-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 ambt_14785 1a557dedbb74b5aec970f1e4daaf3c2f 744 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 2 722 19.738 T 13-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 ambt_14785 1a557dedbb74b5aec970f1e4daaf3c2f 744 Pfam PF03968 OstA-like protein 53 182 3.0E-11 T 13-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal ambt_10030 a5a77c5486fc5777e9f39b14afe69508 1100 Gene3D G3DSA:3.40.1260.20 400 508 2.8E-37 T 13-10-2018 ambt_10030 a5a77c5486fc5777e9f39b14afe69508 1100 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 8.0E-169 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 ambt_10030 a5a77c5486fc5777e9f39b14afe69508 1100 SUPERFAMILY SSF50249 40 124 9.72E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_10030 a5a77c5486fc5777e9f39b14afe69508 1100 Gene3D G3DSA:2.40.50.140 32 125 8.1E-31 T 13-10-2018 ambt_10030 a5a77c5486fc5777e9f39b14afe69508 1100 Pfam PF00575 S1 RNA binding domain 36 118 2.8E-14 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_10030 a5a77c5486fc5777e9f39b14afe69508 1100 SMART SM00316 37 119 1.5E-9 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_10030 a5a77c5486fc5777e9f39b14afe69508 1100 Pfam PF10150 Ribonuclease E/G family 121 390 5.1E-95 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 ambt_10030 a5a77c5486fc5777e9f39b14afe69508 1100 Hamap MF_00970 Ribonuclease E [rne]. 1 1034 34.534 T 13-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 ambt_13070 6c970a900a9ed84bc846c4eba7f713ae 116 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 38 113 2.5E-15 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 ambt_13070 6c970a900a9ed84bc846c4eba7f713ae 116 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 10 116 23.108 T 13-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 ambt_13070 6c970a900a9ed84bc846c4eba7f713ae 116 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 42 111 6.3E-17 T 13-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 ambt_08340 bf6a9413f699cedd3dbfc19bb5344976 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_08340 bf6a9413f699cedd3dbfc19bb5344976 214 SMART SM00421 146 203 2.3E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_08340 bf6a9413f699cedd3dbfc19bb5344976 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 8.3E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_08340 bf6a9413f699cedd3dbfc19bb5344976 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 8.3E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_08340 bf6a9413f699cedd3dbfc19bb5344976 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 8.3E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_08340 bf6a9413f699cedd3dbfc19bb5344976 214 SMART SM00448 2 115 9.3E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_08340 bf6a9413f699cedd3dbfc19bb5344976 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 2.6E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_08340 bf6a9413f699cedd3dbfc19bb5344976 214 SUPERFAMILY SSF52172 2 131 4.7E-33 T 13-10-2018 IPR011006 CheY-like superfamily ambt_08340 bf6a9413f699cedd3dbfc19bb5344976 214 Gene3D G3DSA:3.40.50.12740 2 209 3.5E-57 T 13-10-2018 ambt_08340 bf6a9413f699cedd3dbfc19bb5344976 214 SUPERFAMILY SSF46894 142 210 7.14E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_08340 bf6a9413f699cedd3dbfc19bb5344976 214 Pfam PF00072 Response regulator receiver domain 4 115 6.4E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 SUPERFAMILY SSF53187 180 494 3.77E-122 T 13-10-2018 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 496 39.85 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 3.8E-33 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 348 355 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 Gene3D G3DSA:3.40.630.10 181 496 2.4E-136 T 13-10-2018 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 487 9.1E-123 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 Gene3D G3DSA:3.40.220.10 1 159 1.9E-57 T 13-10-2018 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 PRINTS PR00481 Cytosol aminopeptidase signature 263 280 1.5E-54 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 PRINTS PR00481 Cytosol aminopeptidase signature 322 343 1.5E-54 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 PRINTS PR00481 Cytosol aminopeptidase signature 372 387 1.5E-54 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 PRINTS PR00481 Cytosol aminopeptidase signature 344 364 1.5E-54 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 PRINTS PR00481 Cytosol aminopeptidase signature 285 306 1.5E-54 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_01415 b9834de8a1bdac15e4926c52dc95e4e8 501 SUPERFAMILY SSF52949 2 183 7.65E-50 T 13-10-2018 ambt_00865 61e78338291bd39e70aeed95f314b511 866 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 174 1.1E-18 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_00865 61e78338291bd39e70aeed95f314b511 866 Pfam PF00593 TonB dependent receptor 361 858 1.1E-35 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_00865 61e78338291bd39e70aeed95f314b511 866 SUPERFAMILY SSF56935 42 858 4.76E-97 T 13-10-2018 ambt_00865 61e78338291bd39e70aeed95f314b511 866 Gene3D G3DSA:2.170.130.10 37 178 1.9E-28 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Gene3D G3DSA:1.10.40.90 374 416 1.9E-21 T 13-10-2018 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 7.8E-29 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Gene3D G3DSA:2.40.50.100 948 1022 9.0E-27 T 13-10-2018 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Gene3D G3DSA:1.10.1790.20 1121 1299 4.1E-63 T 13-10-2018 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Gene3D G3DSA:2.40.50.100 1137 1200 4.1E-63 T 13-10-2018 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Gene3D G3DSA:1.10.150.390 1301 1362 9.9E-29 T 13-10-2018 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 8.0E-27 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 383 1.7E-7 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1361 18.946 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 6.3E-88 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 SUPERFAMILY SSF64484 16 1353 0.0 T 13-10-2018 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 SMART SM00663 235 514 1.6E-182 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Gene3D G3DSA:1.10.274.100 490 640 1.2E-39 T 13-10-2018 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1301 5.3E-77 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 20 1024 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Gene3D G3DSA:2.40.50.100 1023 1112 2.2E-10 T 13-10-2018 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Gene3D G3DSA:1.10.132.30 641 790 1.6E-66 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_19630 cc0a911a56aef9bcc4e175ef32d2f42d 1388 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.3E-19 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ambt_01290 434845f270eef7dd6c2d2c80182ab34d 229 Gene3D G3DSA:2.40.10.10 131 214 2.0E-7 T 13-10-2018 ambt_01290 434845f270eef7dd6c2d2c80182ab34d 229 SUPERFAMILY SSF50494 120 202 1.38E-8 T 13-10-2018 IPR009003 Peptidase S1, PA clan ambt_10615 27a15a08c9d894ced505680d667b9fbf 439 Pfam PF04932 O-Antigen ligase 208 361 1.8E-10 T 13-10-2018 IPR007016 O-antigen ligase-related ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 SMART SM00919 269 529 2.4E-126 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 Gene3D G3DSA:3.40.50.720 267 562 8.1E-106 T 13-10-2018 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 PIRSF PIRSF000106 2 561 2.0E-226 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 PRINTS PR00072 Malic enzyme signature 265 281 3.4E-73 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 PRINTS PR00072 Malic enzyme signature 296 312 3.4E-73 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 PRINTS PR00072 Malic enzyme signature 406 422 3.4E-73 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 PRINTS PR00072 Malic enzyme signature 85 109 3.4E-73 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 PRINTS PR00072 Malic enzyme signature 145 174 3.4E-73 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 PRINTS PR00072 Malic enzyme signature 181 203 3.4E-73 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 PRINTS PR00072 Malic enzyme signature 240 258 3.4E-73 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 Gene3D G3DSA:3.40.50.10380 13 266 2.4E-114 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 SMART SM01274 79 259 4.5E-106 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 SUPERFAMILY SSF53223 5 268 1.37E-109 T 13-10-2018 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 SUPERFAMILY SSF51735 269 560 2.56E-94 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 Pfam PF00390 Malic enzyme, N-terminal domain 79 259 1.1E-77 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 ProSitePatterns PS00331 Malic enzymes signature. 265 281 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 ambt_16140 5d0a8626dabe68d953b8b740670d37ec 563 Pfam PF03949 Malic enzyme, NAD binding domain 269 528 1.4E-99 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ambt_14695 c2ed5819e1cbeae0f50efc3a6743fe8b 1041 Gene3D G3DSA:2.170.130.10 125 272 2.2E-26 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_14695 c2ed5819e1cbeae0f50efc3a6743fe8b 1041 Pfam PF00593 TonB dependent receptor 492 1038 1.1E-33 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_14695 c2ed5819e1cbeae0f50efc3a6743fe8b 1041 SMART SM00965 51 102 5.8E-8 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ambt_14695 c2ed5819e1cbeae0f50efc3a6743fe8b 1041 SUPERFAMILY SSF56935 130 1041 5.13E-85 T 13-10-2018 ambt_14695 c2ed5819e1cbeae0f50efc3a6743fe8b 1041 Gene3D G3DSA:3.55.50.30 26 100 2.7E-15 T 13-10-2018 ambt_14695 c2ed5819e1cbeae0f50efc3a6743fe8b 1041 Pfam PF07715 TonB-dependent Receptor Plug Domain 148 268 2.1E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_14695 c2ed5819e1cbeae0f50efc3a6743fe8b 1041 Pfam PF07660 Secretin and TonB N terminus short domain 51 101 8.2E-8 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ambt_19340 cc1bffa41ba266179faf41b61ca54fa4 442 Pfam PF07724 AAA domain (Cdc48 subfamily) 172 328 9.2E-42 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_19340 cc1bffa41ba266179faf41b61ca54fa4 442 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 100 1.8E-6 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_19340 cc1bffa41ba266179faf41b61ca54fa4 442 SMART SM01086 334 430 2.3E-17 T 13-10-2018 IPR019489 Clp ATPase, C-terminal ambt_19340 cc1bffa41ba266179faf41b61ca54fa4 442 SMART SM00382 49 331 3.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_19340 cc1bffa41ba266179faf41b61ca54fa4 442 SUPERFAMILY SSF52540 3 440 3.09E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19340 cc1bffa41ba266179faf41b61ca54fa4 442 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 442 43.058 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 ambt_19340 cc1bffa41ba266179faf41b61ca54fa4 442 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 442 1.1E-216 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 ambt_19340 cc1bffa41ba266179faf41b61ca54fa4 442 Gene3D G3DSA:1.10.8.60 334 439 5.7E-39 T 13-10-2018 ambt_13570 55a6701ea1f1cefa8a92beb1e6a32d7c 718 Pfam PF00005 ABC transporter 498 647 7.9E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_13570 55a6701ea1f1cefa8a92beb1e6a32d7c 718 SMART SM00382 507 693 5.5E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13570 55a6701ea1f1cefa8a92beb1e6a32d7c 718 Pfam PF03412 Peptidase C39 family 21 135 8.0E-7 T 13-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 ambt_13570 55a6701ea1f1cefa8a92beb1e6a32d7c 718 Pfam PF00664 ABC transporter transmembrane region 170 433 2.0E-19 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ambt_13570 55a6701ea1f1cefa8a92beb1e6a32d7c 718 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 19 707 3.4E-252 T 13-10-2018 IPR017750 ATPase, type I secretion system ambt_13570 55a6701ea1f1cefa8a92beb1e6a32d7c 718 Gene3D G3DSA:3.40.50.300 466 715 2.4E-78 T 13-10-2018 ambt_13570 55a6701ea1f1cefa8a92beb1e6a32d7c 718 Gene3D G3DSA:1.20.1560.10 155 465 6.1E-48 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_13570 55a6701ea1f1cefa8a92beb1e6a32d7c 718 SUPERFAMILY SSF52540 474 705 4.53E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13570 55a6701ea1f1cefa8a92beb1e6a32d7c 718 SUPERFAMILY SSF90123 154 464 7.59E-46 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_13570 55a6701ea1f1cefa8a92beb1e6a32d7c 718 Gene3D G3DSA:3.90.70.10 16 136 2.5E-30 T 13-10-2018 ambt_06940 47603ac82e028dd045939d0a76e37806 556 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 83 106 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ambt_06940 47603ac82e028dd045939d0a76e37806 556 PIRSF PIRSF000137 1 538 6.7E-150 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ambt_06940 47603ac82e028dd045939d0a76e37806 556 Pfam PF05199 GMC oxidoreductase 388 524 2.2E-39 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 ambt_06940 47603ac82e028dd045939d0a76e37806 556 Gene3D G3DSA:3.30.410.40 152 471 3.4E-180 T 13-10-2018 ambt_06940 47603ac82e028dd045939d0a76e37806 556 Gene3D G3DSA:3.50.50.60 6 528 3.4E-180 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_06940 47603ac82e028dd045939d0a76e37806 556 Gene3D G3DSA:1.10.1220.110 98 151 3.4E-180 T 13-10-2018 ambt_06940 47603ac82e028dd045939d0a76e37806 556 Pfam PF00732 GMC oxidoreductase 6 297 8.4E-97 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ambt_06940 47603ac82e028dd045939d0a76e37806 556 SUPERFAMILY SSF51905 2 532 2.22E-88 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_06940 47603ac82e028dd045939d0a76e37806 556 TIGRFAM TIGR01810 betA: choline dehydrogenase 7 534 3.4E-241 T 13-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 ambt_06940 47603ac82e028dd045939d0a76e37806 556 SUPERFAMILY SSF54373 292 474 1.57E-61 T 13-10-2018 ambt_06940 47603ac82e028dd045939d0a76e37806 556 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 256 270 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ambt_06940 47603ac82e028dd045939d0a76e37806 556 Gene3D G3DSA:4.10.450.10 39 198 3.4E-180 T 13-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 ambt_12235 e639ed9f185477514985d30dfc9e0698 253 Gene3D G3DSA:3.40.1280.10 2 164 1.5E-67 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ambt_12235 e639ed9f185477514985d30dfc9e0698 253 Gene3D G3DSA:1.10.1270.20 165 253 8.7E-34 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ambt_12235 e639ed9f185477514985d30dfc9e0698 253 PIRSF PIRSF000386 6 252 5.4E-100 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ambt_12235 e639ed9f185477514985d30dfc9e0698 253 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 27 225 1.5E-65 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ambt_12235 e639ed9f185477514985d30dfc9e0698 253 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 6 238 2.3E-100 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ambt_12235 e639ed9f185477514985d30dfc9e0698 253 SUPERFAMILY SSF75217 6 249 4.06E-101 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases ambt_12235 e639ed9f185477514985d30dfc9e0698 253 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 253 113.222 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ambt_16015 d0aa7149c46f5d4fcbcdf00864aae609 86 PRINTS PR00160 Glutaredoxin signature 61 74 1.8E-16 T 13-10-2018 IPR014025 Glutaredoxin subgroup ambt_16015 d0aa7149c46f5d4fcbcdf00864aae609 86 PRINTS PR00160 Glutaredoxin signature 4 22 1.8E-16 T 13-10-2018 IPR014025 Glutaredoxin subgroup ambt_16015 d0aa7149c46f5d4fcbcdf00864aae609 86 PRINTS PR00160 Glutaredoxin signature 47 60 1.8E-16 T 13-10-2018 IPR014025 Glutaredoxin subgroup ambt_16015 d0aa7149c46f5d4fcbcdf00864aae609 86 Pfam PF00462 Glutaredoxin 4 64 3.6E-21 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ambt_16015 d0aa7149c46f5d4fcbcdf00864aae609 86 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 5.5E-36 T 13-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 ambt_16015 d0aa7149c46f5d4fcbcdf00864aae609 86 SUPERFAMILY SSF52833 3 84 1.28E-28 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_16015 d0aa7149c46f5d4fcbcdf00864aae609 86 Gene3D G3DSA:3.40.30.10 1 84 9.7E-28 T 13-10-2018 ambt_16015 d0aa7149c46f5d4fcbcdf00864aae609 86 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 13-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 ambt_03370 55980efed4974373d0ffeeba93ba66b7 198 SUPERFAMILY SSF88659 146 192 2.12E-6 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_03370 55980efed4974373d0ffeeba93ba66b7 198 Pfam PF07638 ECF sigma factor 12 194 8.2E-12 T 13-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like ambt_03370 55980efed4974373d0ffeeba93ba66b7 198 Gene3D G3DSA:1.10.10.10 137 197 1.2E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 2 448 3.7E-210 T 13-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 448 1.8E-32 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PIRSF PIRSF000350 1 448 5.2E-86 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 Gene3D G3DSA:3.50.50.60 4 317 7.7E-118 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 SUPERFAMILY SSF51905 1 358 1.87E-60 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 1.6E-66 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 SUPERFAMILY SSF55424 335 448 2.23E-33 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.3E-66 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 3.3E-66 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 3.3E-66 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 3.3E-66 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 3.3E-66 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 3.3E-66 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 3.3E-66 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 3.3E-66 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 3.3E-66 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 Gene3D G3DSA:3.50.50.60 143 260 7.7E-118 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 Gene3D G3DSA:3.30.390.30 337 449 2.2E-45 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 1.1E-28 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 1.1E-28 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 1.1E-28 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.1E-28 T 13-10-2018 ambt_19290 8ee850a26b5b58d495936aa56882ca43 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.1E-28 T 13-10-2018 ambt_19785 2e7a8a5f479d5187f9ac751b6c71a25a 316 PIRSF PIRSF037505 244 315 3.7E-4 T 13-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 ambt_19785 2e7a8a5f479d5187f9ac751b6c71a25a 316 PIRSF PIRSF037505 12 197 4.6E-9 T 13-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 ambt_19785 2e7a8a5f479d5187f9ac751b6c71a25a 316 Pfam PF02574 Homocysteine S-methyltransferase 23 306 3.8E-58 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ambt_19785 2e7a8a5f479d5187f9ac751b6c71a25a 316 Gene3D G3DSA:3.20.20.330 9 306 5.2E-68 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ambt_19785 2e7a8a5f479d5187f9ac751b6c71a25a 316 SUPERFAMILY SSF82282 18 311 7.46E-76 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ambt_00575 94a5c20168b727d3930373c93d0162bd 706 Pfam PF00535 Glycosyl transferase family 2 113 301 1.4E-34 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_00575 94a5c20168b727d3930373c93d0162bd 706 Gene3D G3DSA:3.90.550.10 102 341 5.5E-84 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_00575 94a5c20168b727d3930373c93d0162bd 706 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 8 684 4.5E-238 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 ambt_00575 94a5c20168b727d3930373c93d0162bd 706 Pfam PF03552 Cellulose synthase 303 431 4.8E-8 T 13-10-2018 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 ambt_00575 94a5c20168b727d3930373c93d0162bd 706 SUPERFAMILY SSF53448 112 413 2.81E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_00575 94a5c20168b727d3930373c93d0162bd 706 PRINTS PR01439 Cellulose synthase subunit A signature 450 469 9.6E-18 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 ambt_00575 94a5c20168b727d3930373c93d0162bd 706 PRINTS PR01439 Cellulose synthase subunit A signature 35 55 9.6E-18 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 ambt_00575 94a5c20168b727d3930373c93d0162bd 706 PRINTS PR01439 Cellulose synthase subunit A signature 119 138 9.6E-18 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 ambt_00575 94a5c20168b727d3930373c93d0162bd 706 PRINTS PR01439 Cellulose synthase subunit A signature 381 407 9.6E-18 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 ambt_00575 94a5c20168b727d3930373c93d0162bd 706 PRINTS PR01439 Cellulose synthase subunit A signature 410 429 9.6E-18 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 ambt_00575 94a5c20168b727d3930373c93d0162bd 706 PRINTS PR01439 Cellulose synthase subunit A signature 522 543 9.6E-18 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 ambt_14545 dc2fd63e070ab53f246eb1fbdc70c094 85 PIRSF PIRSF003113 1 85 2.3E-21 T 13-10-2018 IPR002634 BolA protein ambt_14545 dc2fd63e070ab53f246eb1fbdc70c094 85 SUPERFAMILY SSF82657 2 80 3.66E-26 T 13-10-2018 IPR036065 BolA-like superfamily ambt_14545 dc2fd63e070ab53f246eb1fbdc70c094 85 Gene3D G3DSA:3.30.300.90 1 84 2.8E-29 T 13-10-2018 ambt_14545 dc2fd63e070ab53f246eb1fbdc70c094 85 Pfam PF01722 BolA-like protein 15 71 1.7E-12 T 13-10-2018 IPR002634 BolA protein ambt_02190 a4f88b6a7105140b2132169ad84f9e6f 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.301 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_02190 a4f88b6a7105140b2132169ad84f9e6f 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.4E-6 T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_02190 a4f88b6a7105140b2132169ad84f9e6f 360 Pfam PF00953 Glycosyl transferase family 4 99 283 1.2E-35 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ambt_02190 a4f88b6a7105140b2132169ad84f9e6f 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 360 4.8E-145 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_02190 a4f88b6a7105140b2132169ad84f9e6f 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_02190 a4f88b6a7105140b2132169ad84f9e6f 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_16880 c0eafe29ccc36662dcfaeadf4048777f 137 Pfam PF10980 Protein of unknown function (DUF2787) 16 132 2.8E-39 T 13-10-2018 IPR021248 Protein of unknown function DUF2787 ambt_16880 c0eafe29ccc36662dcfaeadf4048777f 137 Gene3D G3DSA:3.10.450.430 1 136 1.4E-45 T 13-10-2018 ambt_08580 e135e61e3732a73cc13ae5a674c9d249 581 Gene3D G3DSA:2.60.120.260 358 547 8.6E-8 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_08580 e135e61e3732a73cc13ae5a674c9d249 581 Pfam PF14240 YHYH protein 87 186 1.7E-19 T 13-10-2018 IPR025924 YHYH domain ambt_17610 e37e286ac8fa836495251538b4d60123 154 Pfam PF08808 RES domain 5 142 3.1E-25 T 13-10-2018 IPR014914 RES domain ambt_17610 e37e286ac8fa836495251538b4d60123 154 SMART SM00953 18 141 2.2E-25 T 13-10-2018 IPR014914 RES domain ambt_08620 72ce422acfb9bf0b95f29a31da945a48 469 SUPERFAMILY SSF48452 353 453 3.04E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_08620 72ce422acfb9bf0b95f29a31da945a48 469 Pfam PF00144 Beta-lactamase 51 328 9.0E-44 T 13-10-2018 IPR001466 Beta-lactamase-related ambt_08620 72ce422acfb9bf0b95f29a31da945a48 469 Gene3D G3DSA:3.40.710.10 38 334 1.1E-61 T 13-10-2018 ambt_08620 72ce422acfb9bf0b95f29a31da945a48 469 SUPERFAMILY SSF56601 36 336 9.01E-60 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ambt_08620 72ce422acfb9bf0b95f29a31da945a48 469 Gene3D G3DSA:1.25.40.10 335 465 1.5E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12475 cf4ba272a6ee9fe11a92819018db0b48 227 SUPERFAMILY SSF102114 30 200 5.1E-6 T 13-10-2018 ambt_12475 cf4ba272a6ee9fe11a92819018db0b48 227 Pfam PF13394 4Fe-4S single cluster domain 28 132 6.8E-14 T 13-10-2018 ambt_12475 cf4ba272a6ee9fe11a92819018db0b48 227 PIRSF PIRSF000370 5 227 1.9E-62 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ambt_12475 cf4ba272a6ee9fe11a92819018db0b48 227 Pfam PF04055 Radical SAM superfamily 30 127 8.3E-8 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_12475 cf4ba272a6ee9fe11a92819018db0b48 227 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 13 227 8.7E-111 T 13-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ambt_12475 cf4ba272a6ee9fe11a92819018db0b48 227 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 7 227 35.373 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ambt_12475 cf4ba272a6ee9fe11a92819018db0b48 227 Gene3D G3DSA:3.20.20.70 6 227 1.1E-52 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_13985 2231d7bbcf2f27c46fa60bb5c4d2252c 985 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 158 1.3E-10 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_13985 2231d7bbcf2f27c46fa60bb5c4d2252c 985 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 38 985 2.0E-156 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor ambt_13985 2231d7bbcf2f27c46fa60bb5c4d2252c 985 Gene3D G3DSA:2.170.130.10 40 162 1.3E-13 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_13985 2231d7bbcf2f27c46fa60bb5c4d2252c 985 Pfam PF00593 TonB dependent receptor 469 984 2.1E-35 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_13985 2231d7bbcf2f27c46fa60bb5c4d2252c 985 SUPERFAMILY SSF56935 29 985 6.57E-82 T 13-10-2018 ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 3.5E-68 T 13-10-2018 ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 9.5E-50 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.5E-50 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.5E-50 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 9.5E-50 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 9.5E-50 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 9.5E-50 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 244 1.5E-101 T 13-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 Gene3D G3DSA:3.40.50.720 1 246 1.3E-86 T 13-10-2018 ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 SUPERFAMILY SSF51735 5 245 2.06E-85 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 189 7.8E-5 T 13-10-2018 ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.8E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.8E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09985 71817b1ff0aa0b5cc49de20597b63af4 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.8E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04760 0abc6d1cc41a00f53fc067639a515bc1 550 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 542 3.5E-17 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ambt_04760 0abc6d1cc41a00f53fc067639a515bc1 550 Pfam PF00501 AMP-binding enzyme 29 459 1.7E-111 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ambt_04760 0abc6d1cc41a00f53fc067639a515bc1 550 Gene3D G3DSA:3.40.50.12780 12 455 8.1E-119 T 13-10-2018 ambt_04760 0abc6d1cc41a00f53fc067639a515bc1 550 Gene3D G3DSA:3.30.300.310 456 550 1.2E-28 T 13-10-2018 ambt_04760 0abc6d1cc41a00f53fc067639a515bc1 550 ProSitePatterns PS00455 Putative AMP-binding domain signature. 210 221 - T 13-10-2018 IPR020845 AMP-binding, conserved site ambt_04760 0abc6d1cc41a00f53fc067639a515bc1 550 SUPERFAMILY SSF56801 21 550 5.23E-149 T 13-10-2018 ambt_17250 b184fc3fe91ed2cacda0b0f1fa4e2a5f 252 SUPERFAMILY SSF100950 73 233 1.71E-26 T 13-10-2018 IPR037171 NagB/RpiA transferase-like ambt_17250 b184fc3fe91ed2cacda0b0f1fa4e2a5f 252 SMART SM00420 6 58 1.9E-20 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ambt_17250 b184fc3fe91ed2cacda0b0f1fa4e2a5f 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.1E-10 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ambt_17250 b184fc3fe91ed2cacda0b0f1fa4e2a5f 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.1E-10 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ambt_17250 b184fc3fe91ed2cacda0b0f1fa4e2a5f 252 SMART SM01134 72 233 3.6E-65 T 13-10-2018 ambt_17250 b184fc3fe91ed2cacda0b0f1fa4e2a5f 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ambt_17250 b184fc3fe91ed2cacda0b0f1fa4e2a5f 252 Gene3D G3DSA:3.30.750.70 69 131 2.2E-8 T 13-10-2018 ambt_17250 b184fc3fe91ed2cacda0b0f1fa4e2a5f 252 SUPERFAMILY SSF46785 3 73 7.81E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_17250 b184fc3fe91ed2cacda0b0f1fa4e2a5f 252 Gene3D G3DSA:1.10.10.10 1 55 1.9E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_17250 b184fc3fe91ed2cacda0b0f1fa4e2a5f 252 Pfam PF00455 DeoR C terminal sensor domain 74 232 1.5E-49 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain ambt_17250 b184fc3fe91ed2cacda0b0f1fa4e2a5f 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 4.4E-20 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ambt_03945 21a90e2014ffa4cf8c15fff7c174f25a 136 Pfam PF02657 Fe-S metabolism associated domain 11 130 2.6E-44 T 13-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like ambt_03945 21a90e2014ffa4cf8c15fff7c174f25a 136 SUPERFAMILY SSF82649 4 134 8.89E-44 T 13-10-2018 ambt_03945 21a90e2014ffa4cf8c15fff7c174f25a 136 Gene3D G3DSA:3.90.1010.10 1 135 2.4E-47 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1034 0.0 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 Gene3D G3DSA:1.20.1640.10 16 517 1.4E-287 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 SUPERFAMILY SSF82866 299 506 1.7E-35 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 SUPERFAMILY SSF82866 813 1034 4.71E-52 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 Gene3D G3DSA:3.30.2090.10 726 814 1.4E-287 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 SUPERFAMILY SSF82693 567 667 1.52E-8 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 SUPERFAMILY SSF82714 725 809 9.81E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 SUPERFAMILY SSF82693 151 333 2.04E-17 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 Gene3D G3DSA:3.30.70.1320 135 333 1.4E-287 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 Gene3D G3DSA:1.20.1640.10 518 1027 1.4E-287 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 Pfam PF00873 AcrB/AcrD/AcrF family 5 1031 0.0 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 Gene3D G3DSA:3.30.70.1430 570 674 1.4E-287 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 Gene3D G3DSA:3.30.2090.10 189 280 1.4E-287 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 Gene3D G3DSA:3.30.70.1440 675 872 1.4E-287 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 Gene3D G3DSA:3.30.70.1430 42 822 1.4E-287 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.6E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 SUPERFAMILY SSF82693 42 127 1.78E-20 T 13-10-2018 ambt_07370 2276ff3db7ece3e45e9efaceb616a4e4 1035 SUPERFAMILY SSF82714 192 274 2.62E-17 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_15380 562c8f1a9cf66d66be1d7a5b26873bc6 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 154 310 1.2E-49 T 13-10-2018 IPR000160 GGDEF domain ambt_15380 562c8f1a9cf66d66be1d7a5b26873bc6 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 150 313 2.7E-57 T 13-10-2018 IPR000160 GGDEF domain ambt_15380 562c8f1a9cf66d66be1d7a5b26873bc6 319 SUPERFAMILY SSF55073 158 313 9.42E-51 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_15380 562c8f1a9cf66d66be1d7a5b26873bc6 319 Gene3D G3DSA:3.30.70.270 146 316 1.4E-59 T 13-10-2018 ambt_15380 562c8f1a9cf66d66be1d7a5b26873bc6 319 SUPERFAMILY SSF55785 14 128 4.36E-9 T 13-10-2018 IPR035965 PAS domain superfamily ambt_15380 562c8f1a9cf66d66be1d7a5b26873bc6 319 Gene3D G3DSA:3.30.450.20 3 138 3.4E-31 T 13-10-2018 ambt_15380 562c8f1a9cf66d66be1d7a5b26873bc6 319 SMART SM00267 142 314 4.6E-67 T 13-10-2018 IPR000160 GGDEF domain ambt_15380 562c8f1a9cf66d66be1d7a5b26873bc6 319 Pfam PF08448 PAS fold 15 135 2.5E-5 T 13-10-2018 IPR013656 PAS fold-4 ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 PIRSF PIRSF005925 309 432 5.2E-12 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 PIRSF PIRSF005925 17 317 4.0E-43 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 PIRSF PIRSF005925 426 876 1.3E-118 T 13-10-2018 IPR012226 Diguanylate cyclase/phosphodiesterase ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 Gene3D G3DSA:3.30.450.40 158 311 8.6E-24 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 Pfam PF13185 GAF domain 161 302 9.0E-16 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SMART SM00091 24 90 8.6E-6 T 13-10-2018 IPR000014 PAS domain ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SMART SM00091 311 377 4.2E-8 T 13-10-2018 IPR000014 PAS domain ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 432 595 8.5E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 Pfam PF00563 EAL domain 614 848 7.3E-69 T 13-10-2018 IPR001633 EAL domain ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SUPERFAMILY SSF55073 441 598 4.71E-49 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 Gene3D G3DSA:3.30.70.270 435 611 5.5E-58 T 13-10-2018 ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SUPERFAMILY SSF55785 319 422 8.55E-31 T 13-10-2018 IPR035965 PAS domain superfamily ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 Gene3D G3DSA:3.30.450.20 17 142 4.4E-15 T 13-10-2018 ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SUPERFAMILY SSF55785 20 135 8.9E-17 T 13-10-2018 IPR035965 PAS domain superfamily ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SUPERFAMILY SSF55781 125 302 6.76E-26 T 13-10-2018 ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 Pfam PF08448 PAS fold 31 139 5.3E-9 T 13-10-2018 IPR013656 PAS fold-4 ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 Gene3D G3DSA:3.30.450.20 312 434 3.1E-35 T 13-10-2018 ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 Pfam PF00990 Diguanylate cyclase, GGDEF domain 436 593 7.5E-49 T 13-10-2018 IPR000160 GGDEF domain ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SMART SM00086 383 425 9.6E-6 T 13-10-2018 IPR001610 PAC motif ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SMART SM00086 96 137 12.0 T 13-10-2018 IPR001610 PAC motif ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 Pfam PF13426 PAS domain 322 424 6.2E-19 T 13-10-2018 IPR000014 PAS domain ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SMART SM00052 607 853 2.6E-96 T 13-10-2018 IPR001633 EAL domain ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SMART SM00065 142 311 1.5E-8 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SUPERFAMILY SSF141868 613 863 5.1E-83 T 13-10-2018 IPR035919 EAL domain superfamily ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 Gene3D G3DSA:3.20.20.450 612 861 4.9E-89 T 13-10-2018 IPR035919 EAL domain superfamily ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 308 432 9.3E-21 T 13-10-2018 IPR000014 PAS domain ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 141 9.6E-13 T 13-10-2018 IPR000014 PAS domain ambt_10315 2f21a76a25fe62b9bd5a382303b0b506 877 SMART SM00267 425 597 1.7E-59 T 13-10-2018 IPR000160 GGDEF domain ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 SUPERFAMILY SSF51735 9 252 2.68E-85 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 Gene3D G3DSA:3.40.50.720 1 252 3.7E-82 T 13-10-2018 ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 8.4E-67 T 13-10-2018 ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 4.2E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.2E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09085 9e43e923b1ce7ec228156a8f98b62a8b 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.2E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_20275 57fec45ee255ca7b3b48e8bacca682df 276 Gene3D G3DSA:3.40.50.1000 37 276 1.1E-52 T 13-10-2018 IPR023214 HAD superfamily ambt_20275 57fec45ee255ca7b3b48e8bacca682df 276 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 49 276 8.3E-36 T 13-10-2018 IPR005519 Acid phosphatase, class B-like ambt_20275 57fec45ee255ca7b3b48e8bacca682df 276 SUPERFAMILY SSF56784 83 276 5.51E-24 T 13-10-2018 IPR036412 HAD-like superfamily ambt_01465 68b6c002b43cb819a4fc06b33257c1b7 379 Gene3D G3DSA:1.10.3210.10 188 376 4.8E-43 T 13-10-2018 ambt_01465 68b6c002b43cb819a4fc06b33257c1b7 379 SUPERFAMILY SSF47226 13 120 4.32E-19 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_01465 68b6c002b43cb819a4fc06b33257c1b7 379 Pfam PF01627 Hpt domain 14 105 1.3E-7 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_01465 68b6c002b43cb819a4fc06b33257c1b7 379 SUPERFAMILY SSF109604 193 369 7.22E-19 T 13-10-2018 ambt_01465 68b6c002b43cb819a4fc06b33257c1b7 379 SMART SM00073 10 107 2.9E-11 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_01465 68b6c002b43cb819a4fc06b33257c1b7 379 Pfam PF13487 HD domain 260 321 1.1E-14 T 13-10-2018 ambt_01465 68b6c002b43cb819a4fc06b33257c1b7 379 Gene3D G3DSA:1.20.120.160 7 149 9.1E-24 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_21240 1ff820a31381f006bae7f567c336ba1c 283 SUPERFAMILY SSF90123 9 282 1.7E-15 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_21240 1ff820a31381f006bae7f567c336ba1c 283 Pfam PF13748 ABC transporter transmembrane region 8 231 1.1E-52 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ambt_21240 1ff820a31381f006bae7f567c336ba1c 283 Gene3D G3DSA:1.20.1560.10 7 283 1.5E-9 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_10610 9b8aa6dd22681e32ad020263e901f82a 189 Gene3D G3DSA:2.160.10.10 79 185 6.6E-22 T 13-10-2018 ambt_10610 9b8aa6dd22681e32ad020263e901f82a 189 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 126 160 8.0E-8 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_10610 9b8aa6dd22681e32ad020263e901f82a 189 SUPERFAMILY SSF51161 74 180 5.41E-25 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_17110 30e70b5f94de1101806bd0df8ea14eec 181 Gene3D G3DSA:1.10.60.30 34 109 2.2E-19 T 13-10-2018 ambt_17110 30e70b5f94de1101806bd0df8ea14eec 181 PIRSF PIRSF016183 5 181 3.1E-56 T 13-10-2018 IPR006839 Ribosome-associated, YjgA ambt_17110 30e70b5f94de1101806bd0df8ea14eec 181 Gene3D G3DSA:1.10.60.30 110 181 3.8E-25 T 13-10-2018 ambt_17110 30e70b5f94de1101806bd0df8ea14eec 181 SUPERFAMILY SSF158710 34 177 2.62E-44 T 13-10-2018 IPR023153 PSPTO4464-like domain superfamily ambt_17110 30e70b5f94de1101806bd0df8ea14eec 181 Pfam PF04751 Protein of unknown function (DUF615) 24 175 1.1E-50 T 13-10-2018 IPR006839 Ribosome-associated, YjgA ambt_01610 edeb2251f2ef95ded5d9590b58a1ed17 691 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 269 4.2E-10 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_01610 edeb2251f2ef95ded5d9590b58a1ed17 691 Gene3D G3DSA:3.40.190.10 48 268 7.4E-12 T 13-10-2018 ambt_01610 edeb2251f2ef95ded5d9590b58a1ed17 691 SUPERFAMILY SSF53850 311 625 4.5E-49 T 13-10-2018 ambt_01610 edeb2251f2ef95ded5d9590b58a1ed17 691 SUPERFAMILY SSF53850 37 268 5.53E-22 T 13-10-2018 ambt_01610 edeb2251f2ef95ded5d9590b58a1ed17 691 Gene3D G3DSA:3.40.190.10 311 647 1.4E-98 T 13-10-2018 ambt_01610 edeb2251f2ef95ded5d9590b58a1ed17 691 Gene3D G3DSA:3.40.190.10 120 228 7.4E-12 T 13-10-2018 ambt_01610 edeb2251f2ef95ded5d9590b58a1ed17 691 Gene3D G3DSA:3.40.190.10 395 676 1.4E-98 T 13-10-2018 ambt_01610 edeb2251f2ef95ded5d9590b58a1ed17 691 Pfam PF01547 Bacterial extracellular solute-binding protein 329 583 8.3E-25 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein ambt_09465 948b9430a86e11c8a063c50552b2eeee 764 Gene3D G3DSA:1.20.1480.50 248 342 2.5E-8 T 13-10-2018 ambt_09465 948b9430a86e11c8a063c50552b2eeee 764 SUPERFAMILY SSF55073 351 493 5.96E-15 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_09465 948b9430a86e11c8a063c50552b2eeee 764 SMART SM00052 505 752 1.1E-99 T 13-10-2018 IPR001633 EAL domain ambt_09465 948b9430a86e11c8a063c50552b2eeee 764 Gene3D G3DSA:3.20.20.450 508 761 3.9E-88 T 13-10-2018 IPR035919 EAL domain superfamily ambt_09465 948b9430a86e11c8a063c50552b2eeee 764 SUPERFAMILY SSF141868 518 759 3.14E-79 T 13-10-2018 IPR035919 EAL domain superfamily ambt_09465 948b9430a86e11c8a063c50552b2eeee 764 Pfam PF00563 EAL domain 512 747 5.5E-68 T 13-10-2018 IPR001633 EAL domain ambt_09465 948b9430a86e11c8a063c50552b2eeee 764 Gene3D G3DSA:3.30.70.270 343 507 4.7E-19 T 13-10-2018 ambt_09465 948b9430a86e11c8a063c50552b2eeee 764 SMART SM00304 287 340 3.4E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_09465 948b9430a86e11c8a063c50552b2eeee 764 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 344 477 2.4E-13 T 13-10-2018 IPR000160 GGDEF domain ambt_09465 948b9430a86e11c8a063c50552b2eeee 764 SMART SM00267 335 494 1.5E-7 T 13-10-2018 IPR000160 GGDEF domain ambt_09465 948b9430a86e11c8a063c50552b2eeee 764 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 485 6.2E-13 T 13-10-2018 IPR000160 GGDEF domain ambt_10760 8fc9cf9522a6df32cd08970665c52040 121 Pfam PF02311 AraC-like ligand binding domain 46 92 1.3E-4 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 ambt_10760 8fc9cf9522a6df32cd08970665c52040 121 Gene3D G3DSA:2.60.120.10 35 118 4.5E-6 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_10760 8fc9cf9522a6df32cd08970665c52040 121 SUPERFAMILY SSF51182 20 91 6.68E-8 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_08740 c3f6bd12e5014b6391f271339700bc85 284 Pfam PF10987 Protein of unknown function (DUF2806) 63 270 8.0E-60 T 13-10-2018 IPR021254 Protein of unknown function DUF2806 ambt_21735 bac7f5b6b712944fdf0e4975875b2e66 195 SUPERFAMILY SSF110111 52 174 1.7E-42 T 13-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21735 bac7f5b6b712944fdf0e4975875b2e66 195 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 171 2.6E-49 T 13-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21735 bac7f5b6b712944fdf0e4975875b2e66 195 PIRSF PIRSF005413 1 187 5.7E-64 T 13-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21735 bac7f5b6b712944fdf0e4975875b2e66 195 Gene3D G3DSA:2.60.370.10 52 185 7.8E-42 T 13-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_22130 4e78514317fbd4428d5bd468766e658e 199 Pfam PF00043 Glutathione S-transferase, C-terminal domain 108 186 4.1E-9 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_22130 4e78514317fbd4428d5bd468766e658e 199 SUPERFAMILY SSF52833 1 75 2.37E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_22130 4e78514317fbd4428d5bd468766e658e 199 Gene3D G3DSA:1.20.1050.10 81 195 3.0E-35 T 13-10-2018 ambt_22130 4e78514317fbd4428d5bd468766e658e 199 Gene3D G3DSA:3.40.30.10 1 79 1.5E-22 T 13-10-2018 ambt_22130 4e78514317fbd4428d5bd468766e658e 199 SUPERFAMILY SSF47616 76 195 2.73E-25 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_22130 4e78514317fbd4428d5bd468766e658e 199 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 74 7.4E-13 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_07795 36bf40b52327be2a3ad15735935ecfcb 594 Gene3D G3DSA:1.10.390.60 179 455 3.6E-96 T 13-10-2018 ambt_07795 36bf40b52327be2a3ad15735935ecfcb 594 Gene3D G3DSA:2.60.40.3650 5 177 2.8E-57 T 13-10-2018 ambt_07795 36bf40b52327be2a3ad15735935ecfcb 594 SMART SM00228 492 560 4.6E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_07795 36bf40b52327be2a3ad15735935ecfcb 594 PIRSF PIRSF016493 1 593 1.4E-182 T 13-10-2018 IPR024191 Peptidase M61 ambt_07795 36bf40b52327be2a3ad15735935ecfcb 594 SUPERFAMILY SSF50156 497 569 4.47E-10 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 ambt_07795 36bf40b52327be2a3ad15735935ecfcb 594 Pfam PF05299 M61 glycyl aminopeptidase 274 390 5.5E-43 T 13-10-2018 IPR007963 Peptidase M61, catalytic domain ambt_07795 36bf40b52327be2a3ad15735935ecfcb 594 Gene3D G3DSA:2.30.42.10 492 593 7.1E-16 T 13-10-2018 ambt_07795 36bf40b52327be2a3ad15735935ecfcb 594 Pfam PF13180 PDZ domain 494 566 1.3E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_07795 36bf40b52327be2a3ad15735935ecfcb 594 SUPERFAMILY SSF55486 187 422 2.05E-10 T 13-10-2018 ambt_07755 200cc258b3deb13e40d232a23897f496 376 SUPERFAMILY SSF52096 18 349 7.01E-61 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_07755 200cc258b3deb13e40d232a23897f496 376 Gene3D G3DSA:3.90.226.10 6 376 1.6E-130 T 13-10-2018 ambt_07755 200cc258b3deb13e40d232a23897f496 376 Pfam PF16113 Enoyl-CoA hydratase/isomerase 21 362 1.7E-117 T 13-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 ambt_09840 1d0a12882093d3caaad3d075fd7a7747 339 Gene3D G3DSA:1.10.260.40 1 63 2.4E-18 T 13-10-2018 ambt_09840 1d0a12882093d3caaad3d075fd7a7747 339 SUPERFAMILY SSF53822 65 337 8.44E-58 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_09840 1d0a12882093d3caaad3d075fd7a7747 339 Pfam PF13377 Periplasmic binding protein-like domain 173 334 1.7E-28 T 13-10-2018 ambt_09840 1d0a12882093d3caaad3d075fd7a7747 339 Gene3D G3DSA:3.40.50.2300 67 326 8.0E-66 T 13-10-2018 ambt_09840 1d0a12882093d3caaad3d075fd7a7747 339 SMART SM00354 5 76 5.2E-28 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_09840 1d0a12882093d3caaad3d075fd7a7747 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 53 8.3E-15 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_09840 1d0a12882093d3caaad3d075fd7a7747 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 13-10-2018 ambt_09840 1d0a12882093d3caaad3d075fd7a7747 339 Gene3D G3DSA:3.40.50.2300 165 331 8.0E-66 T 13-10-2018 ambt_09840 1d0a12882093d3caaad3d075fd7a7747 339 SUPERFAMILY SSF47413 5 64 6.17E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_16470 384f4df29eba65c88ff554e2b3aa0c16 287 SUPERFAMILY SSF63825 59 272 4.58E-7 T 13-10-2018 ambt_12620 2136486e3865f27bd799e85a519cfa9e 186 Pfam PF04542 Sigma-70 region 2 13 73 3.7E-8 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_12620 2136486e3865f27bd799e85a519cfa9e 186 Pfam PF08281 Sigma-70, region 4 112 158 1.6E-11 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_12620 2136486e3865f27bd799e85a519cfa9e 186 SUPERFAMILY SSF88946 9 87 3.81E-10 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_12620 2136486e3865f27bd799e85a519cfa9e 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 160 2.2E-19 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_12620 2136486e3865f27bd799e85a519cfa9e 186 Gene3D G3DSA:1.10.10.10 93 167 2.2E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_12620 2136486e3865f27bd799e85a519cfa9e 186 Gene3D G3DSA:1.10.1740.10 3 85 1.0E-8 T 13-10-2018 ambt_12620 2136486e3865f27bd799e85a519cfa9e 186 SUPERFAMILY SSF88659 100 163 1.0E-11 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_13100 31103b0aad143df1b5d1fd4d9370229e 424 SUPERFAMILY SSF55729 199 364 1.09E-31 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_13100 31103b0aad143df1b5d1fd4d9370229e 424 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 11 397 6.4E-132 T 13-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition ambt_12575 2f106923211695cfdc4397698905c571 70 Gene3D G3DSA:2.40.50.140 2 69 1.1E-28 T 13-10-2018 ambt_12575 2f106923211695cfdc4397698905c571 70 SMART SM00357 6 70 5.8E-30 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 ambt_12575 2f106923211695cfdc4397698905c571 70 PIRSF PIRSF002599 1 70 2.5E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 ambt_12575 2f106923211695cfdc4397698905c571 70 PRINTS PR00050 Cold shock protein signature 7 22 3.1E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_12575 2f106923211695cfdc4397698905c571 70 PRINTS PR00050 Cold shock protein signature 28 37 3.1E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_12575 2f106923211695cfdc4397698905c571 70 PRINTS PR00050 Cold shock protein signature 43 61 3.1E-17 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_12575 2f106923211695cfdc4397698905c571 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 6.2E-29 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_12575 2f106923211695cfdc4397698905c571 70 SUPERFAMILY SSF50249 4 69 6.12E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_12575 2f106923211695cfdc4397698905c571 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 13-10-2018 IPR019844 Cold-shock conserved site ambt_12255 e8704cd0383ea438fd570fc0ac260f63 219 Gene3D G3DSA:1.10.472.60 59 186 2.5E-53 T 13-10-2018 ambt_12255 e8704cd0383ea438fd570fc0ac260f63 219 Pfam PF13743 Thioredoxin 22 198 7.8E-18 T 13-10-2018 ambt_12255 e8704cd0383ea438fd570fc0ac260f63 219 Gene3D G3DSA:3.40.30.10 23 211 2.5E-53 T 13-10-2018 ambt_12255 e8704cd0383ea438fd570fc0ac260f63 219 SUPERFAMILY SSF52833 21 197 3.48E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_11905 5589e28c70d13c299f1389acdad9ecf4 365 Pfam PF13533 Biotin-lipoyl like 47 97 5.6E-6 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ambt_11905 5589e28c70d13c299f1389acdad9ecf4 365 Gene3D G3DSA:2.40.50.100 47 192 1.8E-42 T 13-10-2018 ambt_11905 5589e28c70d13c299f1389acdad9ecf4 365 Gene3D G3DSA:2.40.30.170 36 284 1.8E-42 T 13-10-2018 ambt_11905 5589e28c70d13c299f1389acdad9ecf4 365 Gene3D G3DSA:2.40.420.20 285 348 1.8E-42 T 13-10-2018 ambt_11905 5589e28c70d13c299f1389acdad9ecf4 365 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 23 350 3.8E-37 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_11905 5589e28c70d13c299f1389acdad9ecf4 365 Gene3D G3DSA:1.10.287.470 84 158 1.8E-42 T 13-10-2018 ambt_11905 5589e28c70d13c299f1389acdad9ecf4 365 Pfam PF13437 HlyD family secretion protein 162 263 3.0E-7 T 13-10-2018 ambt_11905 5589e28c70d13c299f1389acdad9ecf4 365 SUPERFAMILY SSF111369 37 258 3.01E-21 T 13-10-2018 ambt_03340 0662da87d636bfb216baa4c09099780c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.0E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_03340 0662da87d636bfb216baa4c09099780c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.0E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_03340 0662da87d636bfb216baa4c09099780c 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.0E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_03340 0662da87d636bfb216baa4c09099780c 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 183 3.9E-4 T 13-10-2018 ambt_03340 0662da87d636bfb216baa4c09099780c 244 SUPERFAMILY SSF51735 5 243 9.57E-78 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_03340 0662da87d636bfb216baa4c09099780c 244 Gene3D G3DSA:3.40.50.720 3 244 3.5E-77 T 13-10-2018 ambt_03340 0662da87d636bfb216baa4c09099780c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_03340 0662da87d636bfb216baa4c09099780c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_03340 0662da87d636bfb216baa4c09099780c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_03340 0662da87d636bfb216baa4c09099780c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_03340 0662da87d636bfb216baa4c09099780c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_03340 0662da87d636bfb216baa4c09099780c 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.0E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_03340 0662da87d636bfb216baa4c09099780c 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 243 9.7E-61 T 13-10-2018 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 Gene3D G3DSA:3.30.565.10 306 465 1.1E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 SUPERFAMILY SSF55874 295 468 4.45E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 Gene3D G3DSA:1.10.287.130 209 301 3.7E-13 T 13-10-2018 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 SMART SM00388 241 304 1.9E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 SMART SM00448 610 721 1.0E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 SMART SM00448 479 593 7.9E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 Gene3D G3DSA:3.40.50.2300 466 608 1.6E-18 T 13-10-2018 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 SUPERFAMILY SSF52172 609 723 1.37E-31 T 13-10-2018 IPR011006 CheY-like superfamily ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 Pfam PF00072 Response regulator receiver domain 612 720 3.0E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 Pfam PF00072 Response regulator receiver domain 482 593 7.4E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 Pfam PF00512 His Kinase A (phospho-acceptor) domain 242 303 1.2E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 Gene3D G3DSA:3.40.50.12740 609 727 4.5E-31 T 13-10-2018 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 SUPERFAMILY SSF52172 478 598 4.55E-20 T 13-10-2018 IPR011006 CheY-like superfamily ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 SUPERFAMILY SSF47384 233 303 2.75E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 5.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 5.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 5.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 5.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 SMART SM00387 350 465 6.4E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_15375 b8cacbb93355ea5eaa1ba21beb202c7c 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 462 3.5E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 SUPERFAMILY SSF52540 9 277 2.04E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 528 1.7E-295 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.007 T 13-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 5.9E-10 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 SUPERFAMILY SSF50447 262 393 3.06E-29 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 513 2.0E-45 T 13-10-2018 IPR032090 Peptide chain release factor 3, C-terminal ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 Pfam PF00009 Elongation factor Tu GTP binding domain 12 277 1.4E-45 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 SUPERFAMILY SSF54980 393 468 7.19E-16 T 13-10-2018 IPR035647 EF-G domain III/V-like ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 7.2E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 7.2E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 7.2E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 7.2E-10 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 Gene3D G3DSA:3.30.70.3280 390 529 1.6E-50 T 13-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 Gene3D G3DSA:3.40.50.300 72 379 8.7E-115 T 13-10-2018 ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 168 1.1E-17 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_12815 3236ee4c2e4b4ff976a6bb5cf4e819a7 529 Gene3D G3DSA:3.40.50.300 110 275 8.7E-115 T 13-10-2018 ambt_10350 37fb6c8835a07d5c922515702b5125c9 271 SUPERFAMILY SSF54637 132 269 6.65E-23 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_10350 37fb6c8835a07d5c922515702b5125c9 271 SUPERFAMILY SSF54637 2 116 3.28E-26 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_10350 37fb6c8835a07d5c922515702b5125c9 271 Pfam PF13622 Thioesterase-like superfamily 28 268 2.0E-47 T 13-10-2018 ambt_10350 37fb6c8835a07d5c922515702b5125c9 271 Gene3D G3DSA:3.10.129.90 10 270 1.4E-71 T 13-10-2018 ambt_09720 a70538ae1c63ed872c38deb024680813 1028 SUPERFAMILY SSF56176 11 283 1.84E-51 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ambt_09720 a70538ae1c63ed872c38deb024680813 1028 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 667 678 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ambt_09720 a70538ae1c63ed872c38deb024680813 1028 Gene3D G3DSA:3.30.465.40 15 208 4.8E-45 T 13-10-2018 ambt_09720 a70538ae1c63ed872c38deb024680813 1028 Pfam PF02913 FAD linked oxidases, C-terminal domain 285 541 1.7E-57 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ambt_09720 a70538ae1c63ed872c38deb024680813 1028 Pfam PF01565 FAD binding domain 53 191 3.0E-37 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ambt_09720 a70538ae1c63ed872c38deb024680813 1028 Pfam PF13183 4Fe-4S dicluster domain 578 681 7.3E-11 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ambt_09720 a70538ae1c63ed872c38deb024680813 1028 Gene3D G3DSA:3.30.70.2740 421 502 4.4E-6 T 13-10-2018 ambt_09720 a70538ae1c63ed872c38deb024680813 1028 SUPERFAMILY SSF55103 286 545 4.09E-48 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ambt_09720 a70538ae1c63ed872c38deb024680813 1028 SUPERFAMILY SSF46548 575 685 3.66E-6 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ambt_04780 e91c328b169465daaafc52d7e81359ff 220 Gene3D G3DSA:3.90.850.10 1 220 3.1E-65 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_04780 e91c328b169465daaafc52d7e81359ff 220 SUPERFAMILY SSF56529 11 218 4.84E-61 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_04780 e91c328b169465daaafc52d7e81359ff 220 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 214 4.2E-47 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ambt_03445 ca94c765f1ef7b9345b214a8700cce16 78 Pfam PF13744 Helix-turn-helix domain 6 62 2.7E-7 T 13-10-2018 IPR039554 HigA2-like, helix-turn-helix domain ambt_03445 ca94c765f1ef7b9345b214a8700cce16 78 SUPERFAMILY SSF47413 5 67 1.69E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_03445 ca94c765f1ef7b9345b214a8700cce16 78 Gene3D G3DSA:1.10.260.40 1 63 4.1E-8 T 13-10-2018 ambt_22060 8ef5bd868e03846c6516204ab0dec1d3 147 Gene3D G3DSA:3.30.530.20 1 115 8.8E-15 T 13-10-2018 IPR023393 START-like domain superfamily ambt_22060 8ef5bd868e03846c6516204ab0dec1d3 147 SUPERFAMILY SSF55961 1 140 1.04E-15 T 13-10-2018 ambt_22060 8ef5bd868e03846c6516204ab0dec1d3 147 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 114 1.9E-9 T 13-10-2018 IPR019587 Polyketide cyclase/dehydrase ambt_00675 f7413ed441296f077629ef47cc7dc8d3 304 SMART SM00563 88 230 6.6E-21 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_00675 f7413ed441296f077629ef47cc7dc8d3 304 SUPERFAMILY SSF69593 20 289 1.06E-33 T 13-10-2018 ambt_00675 f7413ed441296f077629ef47cc7dc8d3 304 Pfam PF01553 Acyltransferase 75 227 1.3E-16 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_11560 b786bc1899af0cea27e5af13c916a81e 291 Hamap MF_00361 NAD kinase [nadK]. 4 286 33.119 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ambt_11560 b786bc1899af0cea27e5af13c916a81e 291 Gene3D G3DSA:2.60.200.30 126 263 9.5E-93 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ambt_11560 b786bc1899af0cea27e5af13c916a81e 291 Gene3D G3DSA:3.40.50.10330 23 286 9.5E-93 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ambt_11560 b786bc1899af0cea27e5af13c916a81e 291 SUPERFAMILY SSF111331 5 288 1.44E-88 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ambt_11560 b786bc1899af0cea27e5af13c916a81e 291 Pfam PF01513 ATP-NAD kinase 6 270 2.4E-67 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ambt_20180 cc5b4486603516be01c015fbd4c17a5e 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 374 2.4E-156 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ambt_20180 cc5b4486603516be01c015fbd4c17a5e 378 PIRSF PIRSF000267 2 377 1.7E-122 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ambt_20180 cc5b4486603516be01c015fbd4c17a5e 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 3.9E-103 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ambt_22150 e52427de268f810bff31358b75ef528a 461 Gene3D G3DSA:3.40.50.300 77 345 1.4E-110 T 13-10-2018 ambt_22150 e52427de268f810bff31358b75ef528a 461 Gene3D G3DSA:1.10.1140.10 346 461 3.7E-59 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_22150 e52427de268f810bff31358b75ef528a 461 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 2.9E-255 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ambt_22150 e52427de268f810bff31358b75ef528a 461 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 461 56.087 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ambt_22150 e52427de268f810bff31358b75ef528a 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 334 343 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_22150 e52427de268f810bff31358b75ef528a 461 SMART SM00382 143 328 0.0026 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_22150 e52427de268f810bff31358b75ef528a 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 343 8.9E-63 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_22150 e52427de268f810bff31358b75ef528a 461 Gene3D G3DSA:2.40.10.170 2 76 4.0E-26 T 13-10-2018 ambt_22150 e52427de268f810bff31358b75ef528a 461 SUPERFAMILY SSF50615 1 76 2.07E-22 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_22150 e52427de268f810bff31358b75ef528a 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 1.2E-16 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_22150 e52427de268f810bff31358b75ef528a 461 SUPERFAMILY SSF47917 346 460 5.49E-54 T 13-10-2018 ambt_22150 e52427de268f810bff31358b75ef528a 461 SUPERFAMILY SSF52540 79 349 6.77E-89 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_03320 e8796331f8733496a112cff4b4ef79c4 698 SUPERFAMILY SSF56935 50 698 8.06E-101 T 13-10-2018 ambt_03320 e8796331f8733496a112cff4b4ef79c4 698 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 180 8.3E-14 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_03320 e8796331f8733496a112cff4b4ef79c4 698 Pfam PF00593 TonB dependent receptor 244 697 1.2E-33 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_03320 e8796331f8733496a112cff4b4ef79c4 698 Gene3D G3DSA:2.40.170.20 61 698 7.0E-102 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_19085 949f19aec487a6c5abe587c9d22a40ec 166 Gene3D G3DSA:3.30.230.10 74 166 1.5E-37 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_19085 949f19aec487a6c5abe587c9d22a40ec 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 35.03 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ambt_19085 949f19aec487a6c5abe587c9d22a40ec 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.0E-68 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ambt_19085 949f19aec487a6c5abe587c9d22a40ec 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 74 2.0E-29 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 ambt_19085 949f19aec487a6c5abe587c9d22a40ec 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 13-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site ambt_19085 949f19aec487a6c5abe587c9d22a40ec 166 Gene3D G3DSA:3.30.160.20 1 73 1.9E-32 T 13-10-2018 ambt_19085 949f19aec487a6c5abe587c9d22a40ec 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.2E-30 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 ambt_19085 949f19aec487a6c5abe587c9d22a40ec 166 SUPERFAMILY SSF54211 79 158 1.77E-27 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_19085 949f19aec487a6c5abe587c9d22a40ec 166 SUPERFAMILY SSF54768 9 76 5.34E-24 T 13-10-2018 ambt_00755 c58abbffd4ff6408c28b0a7b436c4419 248 SUPERFAMILY SSF52402 23 208 2.61E-55 T 13-10-2018 ambt_00755 c58abbffd4ff6408c28b0a7b436c4419 248 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 4.1E-50 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 ambt_00755 c58abbffd4ff6408c28b0a7b436c4419 248 Gene3D G3DSA:3.40.50.620 8 216 9.0E-65 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_00755 c58abbffd4ff6408c28b0a7b436c4419 248 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 13 243 38.451 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ambt_00755 c58abbffd4ff6408c28b0a7b436c4419 248 PIRSF PIRSF000857 3 246 5.5E-58 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ambt_00755 c58abbffd4ff6408c28b0a7b436c4419 248 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 1.3E-81 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ambt_00755 c58abbffd4ff6408c28b0a7b436c4419 248 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 1.3E-85 T 13-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 ambt_15225 87abab60fc0621f9e9e70b3c4bf8626d 207 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 58 73 5.7E-9 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ambt_15225 87abab60fc0621f9e9e70b3c4bf8626d 207 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 157 172 5.7E-9 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ambt_15225 87abab60fc0621f9e9e70b3c4bf8626d 207 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 96 5.7E-9 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ambt_15225 87abab60fc0621f9e9e70b3c4bf8626d 207 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 79 96 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 ambt_15225 87abab60fc0621f9e9e70b3c4bf8626d 207 PIRSF PIRSF001467 22 202 8.9E-22 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 ambt_15225 87abab60fc0621f9e9e70b3c4bf8626d 207 SUPERFAMILY SSF50891 43 204 3.36E-47 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily ambt_15225 87abab60fc0621f9e9e70b3c4bf8626d 207 Gene3D G3DSA:2.40.100.10 40 205 7.3E-53 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily ambt_15225 87abab60fc0621f9e9e70b3c4bf8626d 207 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 45 201 9.3E-38 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ambt_07585 963236f18691e292d7b898dfdd6f08b4 388 PIRSF PIRSF001554 1 388 7.1E-153 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ambt_07585 963236f18691e292d7b898dfdd6f08b4 388 Pfam PF08442 ATP-grasp domain 2 203 3.6E-81 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ambt_07585 963236f18691e292d7b898dfdd6f08b4 388 SUPERFAMILY SSF56059 1 238 2.55E-80 T 13-10-2018 ambt_07585 963236f18691e292d7b898dfdd6f08b4 388 Pfam PF00549 CoA-ligase 262 382 7.8E-25 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ambt_07585 963236f18691e292d7b898dfdd6f08b4 388 Gene3D G3DSA:3.40.50.261 240 388 7.2E-57 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ambt_07585 963236f18691e292d7b898dfdd6f08b4 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 13-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ambt_07585 963236f18691e292d7b898dfdd6f08b4 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.29 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ambt_07585 963236f18691e292d7b898dfdd6f08b4 388 Gene3D G3DSA:3.30.1490.20 21 104 7.0E-93 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ambt_07585 963236f18691e292d7b898dfdd6f08b4 388 SUPERFAMILY SSF52210 240 385 1.57E-54 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ambt_07585 963236f18691e292d7b898dfdd6f08b4 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.8E-173 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ambt_07585 963236f18691e292d7b898dfdd6f08b4 388 Gene3D G3DSA:3.30.470.20 1 234 7.0E-93 T 13-10-2018 ambt_05220 44d9bf35e134c99ac1f1e3ec8a40b66b 276 Pfam PF08241 Methyltransferase domain 100 151 2.9E-6 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ambt_05220 44d9bf35e134c99ac1f1e3ec8a40b66b 276 SUPERFAMILY SSF53335 104 241 8.34E-13 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_05220 44d9bf35e134c99ac1f1e3ec8a40b66b 276 Gene3D G3DSA:3.40.50.150 80 234 1.3E-11 T 13-10-2018 ambt_07480 1b4a2e40f6800c6e6c46e2094b8a950c 581 Gene3D G3DSA:3.40.50.300 327 579 5.5E-92 T 13-10-2018 ambt_07480 1b4a2e40f6800c6e6c46e2094b8a950c 581 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 579 3.0E-219 T 13-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 ambt_07480 1b4a2e40f6800c6e6c46e2094b8a950c 581 Pfam PF00664 ABC transporter transmembrane region 41 289 6.5E-51 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ambt_07480 1b4a2e40f6800c6e6c46e2094b8a950c 581 SMART SM00382 366 553 1.7E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_07480 1b4a2e40f6800c6e6c46e2094b8a950c 581 Gene3D G3DSA:1.20.1560.10 1 326 1.6E-74 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_07480 1b4a2e40f6800c6e6c46e2094b8a950c 581 SUPERFAMILY SSF52540 331 578 4.1E-91 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_07480 1b4a2e40f6800c6e6c46e2094b8a950c 581 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_07480 1b4a2e40f6800c6e6c46e2094b8a950c 581 SUPERFAMILY SSF90123 6 325 2.35E-71 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_07480 1b4a2e40f6800c6e6c46e2094b8a950c 581 Pfam PF00005 ABC transporter 357 507 9.5E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 SMART SM00388 173 242 1.9E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 SMART SM00448 423 533 7.0E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 290 398 3.4E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 Pfam PF01590 GAF domain 26 159 1.5E-9 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 SUPERFAMILY SSF52172 422 538 1.02E-30 T 13-10-2018 IPR011006 CheY-like superfamily ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 SMART SM00387 289 399 1.2E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 Gene3D G3DSA:1.10.287.130 160 243 8.9E-21 T 13-10-2018 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 SMART SM00065 26 168 7.1E-9 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 Pfam PF00512 His Kinase A (phospho-acceptor) domain 174 242 1.2E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 Gene3D G3DSA:3.40.50.2300 421 539 6.8E-31 T 13-10-2018 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 SUPERFAMILY SSF47384 158 244 1.51E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 SUPERFAMILY SSF55874 231 397 9.04E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 340 1.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 1.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 354 1.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 396 1.8E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 SUPERFAMILY SSF55781 26 169 3.19E-27 T 13-10-2018 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 Gene3D G3DSA:3.30.450.40 12 159 1.5E-15 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 Pfam PF00072 Response regulator receiver domain 425 533 4.0E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_02400 48b2cfe3d531efb3d95d6ef60b0289f2 539 Gene3D G3DSA:3.30.565.10 244 402 1.5E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 SMART SM00448 1030 1142 1.4E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 Pfam PF12833 Helix-turn-helix domain 1205 1279 3.5E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1235 1276 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 SMART SM00388 792 856 7.8E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 Pfam PF00512 His Kinase A (phospho-acceptor) domain 793 853 2.6E-7 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 903 1007 2.5E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 Gene3D G3DSA:3.40.50.2300 1016 1157 5.9E-31 T 13-10-2018 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 Pfam PF00072 Response regulator receiver domain 1032 1142 7.8E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 SUPERFAMILY SSF52172 1027 1155 9.25E-31 T 13-10-2018 IPR011006 CheY-like superfamily ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 Gene3D G3DSA:2.130.10.10 48 187 1.5E-9 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 PRINTS PR00344 Bacterial sensor protein C-terminal signature 936 950 9.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 PRINTS PR00344 Bacterial sensor protein C-terminal signature 993 1006 9.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 PRINTS PR00344 Bacterial sensor protein C-terminal signature 969 987 9.7E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 SMART SM00387 899 1009 1.9E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 SUPERFAMILY SSF47384 782 854 3.73E-8 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 SUPERFAMILY SSF50998 44 581 7.06E-6 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 SMART SM00342 1198 1280 2.0E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 Gene3D G3DSA:1.10.10.60 1184 1281 9.9E-19 T 13-10-2018 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 Gene3D G3DSA:2.60.40.10 612 740 3.3E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 Gene3D G3DSA:3.30.565.10 860 1015 1.9E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 SUPERFAMILY SSF55874 879 1007 7.07E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 Gene3D G3DSA:1.10.287.130 781 855 2.5E-9 T 13-10-2018 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 Gene3D G3DSA:2.130.10.10 341 581 3.6E-7 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_16660 44254394dfb924e30de1d4bb57432f8d 1293 SUPERFAMILY SSF46689 1235 1282 2.51E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 SUPERFAMILY SSF48256 8 373 7.33E-125 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 Gene3D G3DSA:1.10.580.10 30 353 7.4E-121 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 Pfam PF00285 Citrate synthase, C-terminal domain 9 355 9.2E-116 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 PIRSF PIRSF001369 1 374 1.4E-117 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 Gene3D G3DSA:1.10.230.10 222 320 7.4E-121 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 PRINTS PR00143 Citrate synthase signature 249 269 5.4E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 PRINTS PR00143 Citrate synthase signature 124 137 5.4E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 PRINTS PR00143 Citrate synthase signature 174 189 5.4E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 PRINTS PR00143 Citrate synthase signature 306 322 5.4E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 PRINTS PR00143 Citrate synthase signature 326 340 5.4E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 PRINTS PR00143 Citrate synthase signature 196 224 5.4E-36 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 ambt_01725 ce124a3bd0937abc60d2713aa551df69 374 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 9 373 3.6E-155 T 13-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 ambt_06630 398b331c44a59b9dc322cf6a98882e94 151 Gene3D G3DSA:3.10.129.10 4 146 9.0E-34 T 13-10-2018 ambt_06630 398b331c44a59b9dc322cf6a98882e94 151 Pfam PF01575 MaoC like domain 9 114 6.8E-24 T 13-10-2018 IPR002539 MaoC-like dehydratase domain ambt_06630 398b331c44a59b9dc322cf6a98882e94 151 SUPERFAMILY SSF54637 6 146 1.55E-31 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_09855 c53a8eead047a35017217b101a1e6a9f 175 Gene3D G3DSA:3.10.20.30 1 75 3.5E-28 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_09855 c53a8eead047a35017217b101a1e6a9f 175 SUPERFAMILY SSF47741 72 152 2.49E-31 T 13-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily ambt_09855 c53a8eead047a35017217b101a1e6a9f 175 Pfam PF01799 [2Fe-2S] binding domain 72 144 2.1E-28 T 13-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ambt_09855 c53a8eead047a35017217b101a1e6a9f 175 Gene3D G3DSA:1.10.150.120 76 156 7.1E-27 T 13-10-2018 ambt_09855 c53a8eead047a35017217b101a1e6a9f 175 SUPERFAMILY SSF54292 2 77 1.57E-25 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ambt_09855 c53a8eead047a35017217b101a1e6a9f 175 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ambt_09855 c53a8eead047a35017217b101a1e6a9f 175 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 51 3.0E-7 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ambt_09490 9be3b76c307227810df798d76bc76c80 645 Gene3D G3DSA:3.40.50.300 143 321 2.6E-70 T 13-10-2018 ambt_09490 9be3b76c307227810df798d76bc76c80 645 SUPERFAMILY SSF140990 403 604 1.57E-72 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 ambt_09490 9be3b76c307227810df798d76bc76c80 645 Gene3D G3DSA:2.40.50.920 24 101 1.5E-20 T 13-10-2018 ambt_09490 9be3b76c307227810df798d76bc76c80 645 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 101 594 3.4E-242 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 ambt_09490 9be3b76c307227810df798d76bc76c80 645 SUPERFAMILY SSF52540 145 392 5.63E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_09490 9be3b76c307227810df798d76bc76c80 645 Gene3D G3DSA:1.10.8.60 323 397 2.8E-28 T 13-10-2018 ambt_09490 9be3b76c307227810df798d76bc76c80 645 Gene3D G3DSA:1.20.58.760 398 601 1.5E-71 T 13-10-2018 ambt_09490 9be3b76c307227810df798d76bc76c80 645 Pfam PF06480 FtsH Extracellular 5 94 3.8E-11 T 13-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 ambt_09490 9be3b76c307227810df798d76bc76c80 645 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 ambt_09490 9be3b76c307227810df798d76bc76c80 645 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 608 37.226 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 ambt_09490 9be3b76c307227810df798d76bc76c80 645 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 8.8E-46 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_09490 9be3b76c307227810df798d76bc76c80 645 SMART SM00382 185 324 2.1E-26 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_09490 9be3b76c307227810df798d76bc76c80 645 Pfam PF01434 Peptidase family M41 383 592 4.5E-79 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 ambt_11250 ac0f8dd88c08a531603ed7eeac573566 191 Gene3D G3DSA:2.160.10.10 18 191 9.5E-25 T 13-10-2018 ambt_11250 ac0f8dd88c08a531603ed7eeac573566 191 PIRSF PIRSF000441 29 191 5.3E-42 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ambt_11250 ac0f8dd88c08a531603ed7eeac573566 191 SUPERFAMILY SSF51161 64 188 3.47E-31 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_11250 ac0f8dd88c08a531603ed7eeac573566 191 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 145 173 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ambt_11250 ac0f8dd88c08a531603ed7eeac573566 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 137 170 1.0E-6 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_07945 9237c8c3d5d849e4c0bc3480629dc49f 510 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 211 494 2.7E-108 T 13-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 ambt_07945 9237c8c3d5d849e4c0bc3480629dc49f 510 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 164 2.5E-17 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_07945 9237c8c3d5d849e4c0bc3480629dc49f 510 Gene3D G3DSA:3.60.120.10 11 500 1.6E-151 T 13-10-2018 IPR005801 ADC synthase GO:0009058 ambt_07945 9237c8c3d5d849e4c0bc3480629dc49f 510 PRINTS PR00095 Anthranilate synthase component I signature 433 447 4.2E-12 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_07945 9237c8c3d5d849e4c0bc3480629dc49f 510 PRINTS PR00095 Anthranilate synthase component I signature 339 352 4.2E-12 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_07945 9237c8c3d5d849e4c0bc3480629dc49f 510 PRINTS PR00095 Anthranilate synthase component I signature 448 462 4.2E-12 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_07945 9237c8c3d5d849e4c0bc3480629dc49f 510 PRINTS PR00095 Anthranilate synthase component I signature 353 366 4.2E-12 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_07945 9237c8c3d5d849e4c0bc3480629dc49f 510 Pfam PF00425 chorismate binding enzyme 238 491 6.0E-95 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ambt_07945 9237c8c3d5d849e4c0bc3480629dc49f 510 SUPERFAMILY SSF56322 24 499 1.7E-127 T 13-10-2018 IPR005801 ADC synthase GO:0009058 ambt_12070 ecea08226357c3d0c3af0f7946e064ff 351 SUPERFAMILY SSF142754 29 340 1.7E-108 T 13-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ambt_12070 ecea08226357c3d0c3af0f7946e064ff 351 Pfam PF02445 Quinolinate synthetase A protein 32 339 4.4E-103 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ambt_12070 ecea08226357c3d0c3af0f7946e064ff 351 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 67.6 T 13-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ambt_12070 ecea08226357c3d0c3af0f7946e064ff 351 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 28 342 6.4E-115 T 13-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ambt_12070 ecea08226357c3d0c3af0f7946e064ff 351 Gene3D G3DSA:3.40.50.10800 31 322 5.2E-96 T 13-10-2018 ambt_12070 ecea08226357c3d0c3af0f7946e064ff 351 Gene3D G3DSA:3.40.50.10800 200 295 5.2E-96 T 13-10-2018 ambt_12070 ecea08226357c3d0c3af0f7946e064ff 351 Gene3D G3DSA:3.40.50.10800 115 339 5.2E-96 T 13-10-2018 ambt_17415 ed2cebf0eeebb8dfff96e7bdebc0b4d3 144 Gene3D G3DSA:3.10.129.10 12 140 2.6E-34 T 13-10-2018 ambt_17415 ed2cebf0eeebb8dfff96e7bdebc0b4d3 144 Pfam PF13279 Thioesterase-like superfamily 18 132 3.8E-14 T 13-10-2018 ambt_17415 ed2cebf0eeebb8dfff96e7bdebc0b4d3 144 SUPERFAMILY SSF54637 13 137 7.01E-36 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_01900 f2aa3e121f26de2008238568b5cc3379 337 PIRSF PIRSF005508 1 337 1.4E-127 T 13-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ambt_01900 f2aa3e121f26de2008238568b5cc3379 337 Pfam PF01758 Sodium Bile acid symporter family 47 241 3.7E-49 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ambt_01900 f2aa3e121f26de2008238568b5cc3379 337 Gene3D G3DSA:1.20.1530.20 2 331 1.9E-32 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily ambt_01900 f2aa3e121f26de2008238568b5cc3379 337 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 329 5.4E-129 T 13-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 ambt_19040 32b3b0b7b5adb02c562094b678ed4e8e 133 Gene3D G3DSA:3.90.1030.10 1 117 1.4E-47 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19040 32b3b0b7b5adb02c562094b678ed4e8e 133 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19040 32b3b0b7b5adb02c562094b678ed4e8e 133 SUPERFAMILY SSF64263 1 119 3.79E-51 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19040 32b3b0b7b5adb02c562094b678ed4e8e 133 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.3E-48 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19040 32b3b0b7b5adb02c562094b678ed4e8e 133 Pfam PF01196 Ribosomal protein L17 20 116 6.2E-34 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19040 32b3b0b7b5adb02c562094b678ed4e8e 133 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.504 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_10270 554db90fba47d4a576e6b5edb4390300 391 SUPERFAMILY SSF53901 6 268 4.51E-75 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_10270 554db90fba47d4a576e6b5edb4390300 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 389 3.3E-127 T 13-10-2018 IPR002155 Thiolase GO:0016747 ambt_10270 554db90fba47d4a576e6b5edb4390300 391 Pfam PF00108 Thiolase, N-terminal domain 6 261 1.6E-85 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ambt_10270 554db90fba47d4a576e6b5edb4390300 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 ambt_10270 554db90fba47d4a576e6b5edb4390300 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ambt_10270 554db90fba47d4a576e6b5edb4390300 391 Gene3D G3DSA:3.40.47.10 8 274 1.3E-138 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_10270 554db90fba47d4a576e6b5edb4390300 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 2.6E-44 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ambt_10270 554db90fba47d4a576e6b5edb4390300 391 PIRSF PIRSF000429 1 391 1.6E-110 T 13-10-2018 IPR002155 Thiolase GO:0016747 ambt_10270 554db90fba47d4a576e6b5edb4390300 391 Gene3D G3DSA:3.40.47.10 126 387 1.3E-138 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_10270 554db90fba47d4a576e6b5edb4390300 391 SUPERFAMILY SSF53901 270 390 5.6E-39 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_12995 f9e5c9bcad8da3e08e69572734263f2d 219 Gene3D G3DSA:1.20.1050.10 90 217 3.2E-49 T 13-10-2018 ambt_12995 f9e5c9bcad8da3e08e69572734263f2d 219 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 216 3.4E-86 T 13-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 ambt_12995 f9e5c9bcad8da3e08e69572734263f2d 219 SUPERFAMILY SSF52833 2 90 1.79E-23 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_12995 f9e5c9bcad8da3e08e69572734263f2d 219 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 85 1.9E-17 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_12995 f9e5c9bcad8da3e08e69572734263f2d 219 Pfam PF14497 Glutathione S-transferase, C-terminal domain 128 209 2.1E-5 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_12995 f9e5c9bcad8da3e08e69572734263f2d 219 Gene3D G3DSA:3.40.30.10 5 84 3.7E-27 T 13-10-2018 ambt_12995 f9e5c9bcad8da3e08e69572734263f2d 219 SUPERFAMILY SSF47616 88 214 8.63E-29 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_16225 08fc423e09096e2e1f76272200d686bc 335 Pfam PF00579 tRNA synthetases class I (W and Y) 4 286 1.4E-79 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_16225 08fc423e09096e2e1f76272200d686bc 335 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 4 332 41.146 T 13-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 ambt_16225 08fc423e09096e2e1f76272200d686bc 335 Gene3D G3DSA:3.40.50.620 7 330 3.5E-140 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_16225 08fc423e09096e2e1f76272200d686bc 335 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 22 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_16225 08fc423e09096e2e1f76272200d686bc 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 196 206 6.1E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ambt_16225 08fc423e09096e2e1f76272200d686bc 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 6.1E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ambt_16225 08fc423e09096e2e1f76272200d686bc 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 143 164 6.1E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ambt_16225 08fc423e09096e2e1f76272200d686bc 335 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 17 33 6.1E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ambt_16225 08fc423e09096e2e1f76272200d686bc 335 SUPERFAMILY SSF52374 6 331 2.81E-98 T 13-10-2018 ambt_16225 08fc423e09096e2e1f76272200d686bc 335 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 331 9.4E-114 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ambt_16225 08fc423e09096e2e1f76272200d686bc 335 Gene3D G3DSA:1.10.240.10 187 299 3.5E-140 T 13-10-2018 ambt_08570 c3680cb41995ee7e83393e993d93c1b1 234 Gene3D G3DSA:2.60.40.2130 14 178 6.6E-13 T 13-10-2018 IPR038678 Spondin, N-terminal domain superfamily Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 ambt_08570 c3680cb41995ee7e83393e993d93c1b1 234 Pfam PF06468 Spondin_N 37 155 9.1E-11 T 13-10-2018 IPR009465 Spondin, N-terminal Reactome: R-HSA-5083635|Reactome: R-HSA-5173214 ambt_07235 c630d99ea2319cd88723e7f9e796ccb1 160 Gene3D G3DSA:3.10.450.50 36 159 2.2E-33 T 13-10-2018 ambt_07235 c630d99ea2319cd88723e7f9e796ccb1 160 SUPERFAMILY SSF54427 46 159 5.18E-23 T 13-10-2018 IPR032710 NTF2-like domain superfamily ambt_07235 c630d99ea2319cd88723e7f9e796ccb1 160 Pfam PF13474 SnoaL-like domain 48 159 7.5E-9 T 13-10-2018 IPR037401 SnoaL-like domain ambt_12240 a3b34b3a904eedba1a56b34d297a05ba 173 SUPERFAMILY SSF50447 6 91 9.53E-22 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_12240 a3b34b3a904eedba1a56b34d297a05ba 173 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 173 2.4E-48 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ambt_12240 a3b34b3a904eedba1a56b34d297a05ba 173 SUPERFAMILY SSF50346 98 173 1.84E-19 T 13-10-2018 IPR011033 PRC-barrel-like superfamily ambt_12240 a3b34b3a904eedba1a56b34d297a05ba 173 Gene3D G3DSA:2.30.30.240 92 173 1.6E-27 T 13-10-2018 ambt_12240 a3b34b3a904eedba1a56b34d297a05ba 173 Pfam PF01782 RimM N-terminal domain 9 87 7.6E-25 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 ambt_12240 a3b34b3a904eedba1a56b34d297a05ba 173 Gene3D G3DSA:2.40.30.60 1 91 4.6E-30 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 ambt_12240 a3b34b3a904eedba1a56b34d297a05ba 173 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 173 23.077 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ambt_12240 a3b34b3a904eedba1a56b34d297a05ba 173 Pfam PF05239 PRC-barrel domain 95 168 2.4E-12 T 13-10-2018 IPR027275 PRC-barrel domain ambt_07700 844911a07715037b16716b08c579c233 212 SUPERFAMILY SSF46689 3 72 2.41E-18 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_07700 844911a07715037b16716b08c579c233 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 7.5E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_07700 844911a07715037b16716b08c579c233 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 2.9E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_07700 844911a07715037b16716b08c579c233 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 2.9E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_07700 844911a07715037b16716b08c579c233 212 SUPERFAMILY SSF48498 82 206 2.13E-37 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ambt_07700 844911a07715037b16716b08c579c233 212 Gene3D G3DSA:1.10.357.10 1 209 6.8E-59 T 13-10-2018 ambt_07700 844911a07715037b16716b08c579c233 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ambt_09485 69712628faabd6306a03f1eec86ccd90 274 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 14 269 4.1E-105 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 ambt_09485 69712628faabd6306a03f1eec86ccd90 274 SUPERFAMILY SSF51717 5 271 1.31E-105 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_09485 69712628faabd6306a03f1eec86ccd90 274 Pfam PF00809 Pterin binding enzyme 16 255 4.1E-89 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_09485 69712628faabd6306a03f1eec86ccd90 274 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 49 62 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_09485 69712628faabd6306a03f1eec86ccd90 274 Gene3D G3DSA:3.20.20.20 2 273 6.4E-112 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_09485 69712628faabd6306a03f1eec86ccd90 274 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 15 30 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_21145 616c97c4aeac065f6eb552c4eee4a651 303 Gene3D G3DSA:3.40.190.10 164 266 8.4E-65 T 13-10-2018 ambt_21145 616c97c4aeac065f6eb552c4eee4a651 303 Gene3D G3DSA:3.40.190.10 93 293 8.4E-65 T 13-10-2018 ambt_21145 616c97c4aeac065f6eb552c4eee4a651 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 8.1E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_21145 616c97c4aeac065f6eb552c4eee4a651 303 Gene3D G3DSA:1.10.10.10 4 91 8.6E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_21145 616c97c4aeac065f6eb552c4eee4a651 303 SUPERFAMILY SSF46785 5 113 1.61E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_21145 616c97c4aeac065f6eb552c4eee4a651 303 Pfam PF03466 LysR substrate binding domain 90 295 1.4E-42 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_21145 616c97c4aeac065f6eb552c4eee4a651 303 SUPERFAMILY SSF53850 93 298 1.72E-42 T 13-10-2018 ambt_13600 42101fb7dc0fccdfed73f532879a62c7 455 Gene3D G3DSA:1.10.530.10 280 453 1.1E-30 T 13-10-2018 ambt_13600 42101fb7dc0fccdfed73f532879a62c7 455 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 263 3.0E-22 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_13600 42101fb7dc0fccdfed73f532879a62c7 455 Gene3D G3DSA:3.40.190.10 127 220 9.4E-52 T 13-10-2018 ambt_13600 42101fb7dc0fccdfed73f532879a62c7 455 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 305 333 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 ambt_13600 42101fb7dc0fccdfed73f532879a62c7 455 SUPERFAMILY SSF53850 43 263 2.13E-28 T 13-10-2018 ambt_13600 42101fb7dc0fccdfed73f532879a62c7 455 SUPERFAMILY SSF53955 241 417 1.18E-31 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily ambt_13600 42101fb7dc0fccdfed73f532879a62c7 455 Pfam PF01464 Transglycosylase SLT domain 294 390 6.3E-18 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 ambt_13600 42101fb7dc0fccdfed73f532879a62c7 455 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 455 44.563 T 13-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 ambt_13600 42101fb7dc0fccdfed73f532879a62c7 455 SMART SM00062 42 264 2.2E-17 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_13600 42101fb7dc0fccdfed73f532879a62c7 455 Gene3D G3DSA:3.40.190.10 39 259 9.4E-52 T 13-10-2018 ambt_13475 ba120591efa35a217f0be69e82ee7bf1 370 Pfam PF02119 Flagellar P-ring protein 23 369 2.1E-135 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ambt_13475 ba120591efa35a217f0be69e82ee7bf1 370 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 370 38.297 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ambt_13475 ba120591efa35a217f0be69e82ee7bf1 370 PRINTS PR01010 Flagellar P-ring protein signature 81 100 1.2E-74 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ambt_13475 ba120591efa35a217f0be69e82ee7bf1 370 PRINTS PR01010 Flagellar P-ring protein signature 161 179 1.2E-74 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ambt_13475 ba120591efa35a217f0be69e82ee7bf1 370 PRINTS PR01010 Flagellar P-ring protein signature 38 53 1.2E-74 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ambt_13475 ba120591efa35a217f0be69e82ee7bf1 370 PRINTS PR01010 Flagellar P-ring protein signature 120 138 1.2E-74 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ambt_13475 ba120591efa35a217f0be69e82ee7bf1 370 PRINTS PR01010 Flagellar P-ring protein signature 103 120 1.2E-74 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ambt_13475 ba120591efa35a217f0be69e82ee7bf1 370 PRINTS PR01010 Flagellar P-ring protein signature 187 205 1.2E-74 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ambt_13475 ba120591efa35a217f0be69e82ee7bf1 370 PRINTS PR01010 Flagellar P-ring protein signature 55 70 1.2E-74 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ambt_13475 ba120591efa35a217f0be69e82ee7bf1 370 PRINTS PR01010 Flagellar P-ring protein signature 23 38 1.2E-74 T 13-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ambt_14160 41778d053463fdfda17fabd28644efa8 785 Pfam PF00271 Helicase conserved C-terminal domain 638 744 1.3E-6 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_14160 41778d053463fdfda17fabd28644efa8 785 SUPERFAMILY SSF52540 438 750 1.25E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14160 41778d053463fdfda17fabd28644efa8 785 Gene3D G3DSA:3.40.50.300 598 785 6.0E-32 T 13-10-2018 ambt_14160 41778d053463fdfda17fabd28644efa8 785 SMART SM00487 419 596 3.6E-17 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_14160 41778d053463fdfda17fabd28644efa8 785 Gene3D G3DSA:3.40.50.300 413 588 1.1E-35 T 13-10-2018 ambt_14160 41778d053463fdfda17fabd28644efa8 785 Pfam PF04851 Type III restriction enzyme, res subunit 422 565 1.1E-21 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ambt_15700 ea553c7d0fae89753f8f50244d1c9b30 161 SUPERFAMILY SSF55729 17 160 1.1E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_15700 ea553c7d0fae89753f8f50244d1c9b30 161 Pfam PF00583 Acetyltransferase (GNAT) family 53 141 3.0E-15 T 13-10-2018 IPR000182 GNAT domain ambt_15700 ea553c7d0fae89753f8f50244d1c9b30 161 Gene3D G3DSA:3.40.630.30 11 153 2.8E-24 T 13-10-2018 ambt_05115 75d2242778211ea488a28895b2d6a1fc 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.3E-13 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_05115 75d2242778211ea488a28895b2d6a1fc 310 SUPERFAMILY SSF46785 3 111 2.79E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_05115 75d2242778211ea488a28895b2d6a1fc 310 Gene3D G3DSA:1.10.10.10 1 88 3.0E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_05115 75d2242778211ea488a28895b2d6a1fc 310 Pfam PF03466 LysR substrate binding domain 88 292 1.6E-35 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_05115 75d2242778211ea488a28895b2d6a1fc 310 Gene3D G3DSA:3.40.190.290 90 291 4.7E-51 T 13-10-2018 ambt_05115 75d2242778211ea488a28895b2d6a1fc 310 SUPERFAMILY SSF53850 86 293 5.92E-39 T 13-10-2018 ambt_01895 42204c5e8a678ec015ae30903de8f92a 128 Pfam PF00072 Response regulator receiver domain 5 113 3.0E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01895 42204c5e8a678ec015ae30903de8f92a 128 Gene3D G3DSA:3.40.50.2300 1 119 1.2E-25 T 13-10-2018 ambt_01895 42204c5e8a678ec015ae30903de8f92a 128 SUPERFAMILY SSF52172 3 118 8.68E-28 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01895 42204c5e8a678ec015ae30903de8f92a 128 SMART SM00448 3 115 2.4E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_09305 03446de4b2737578d83dfd7755425539 300 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 79 156 1.3E-13 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09305 03446de4b2737578d83dfd7755425539 300 Gene3D G3DSA:1.10.760.10 177 300 3.8E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_09305 03446de4b2737578d83dfd7755425539 300 SUPERFAMILY SSF46626 21 173 2.36E-15 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_09305 03446de4b2737578d83dfd7755425539 300 SUPERFAMILY SSF46626 211 298 1.24E-11 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_09305 03446de4b2737578d83dfd7755425539 300 Gene3D G3DSA:1.10.760.10 76 173 3.7E-14 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_20620 4974307f7d76af85b69d059e9583c449 203 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 6 199 6.0E-104 T 13-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 ambt_20620 4974307f7d76af85b69d059e9583c449 203 PIRSF PIRSF005624 1 202 1.4E-48 T 13-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 ambt_20620 4974307f7d76af85b69d059e9583c449 203 Gene3D G3DSA:3.40.50.300 5 202 1.4E-49 T 13-10-2018 ambt_20620 4974307f7d76af85b69d059e9583c449 203 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 178 5.4E-39 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ambt_20620 4974307f7d76af85b69d059e9583c449 203 Hamap MF_01389 Urease accessory protein UreG [ureG]. 4 202 46.593 T 13-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 ambt_20620 4974307f7d76af85b69d059e9583c449 203 SUPERFAMILY SSF52540 3 197 1.92E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.09 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.6E-69 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 Gene3D G3DSA:2.40.50.140 1 124 1.3E-62 T 13-10-2018 ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 SUPERFAMILY SSF50249 3 123 1.88E-50 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 PIRSF PIRSF002133 1 124 1.2E-53 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.9E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.9E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.9E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.9E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.9E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.9E-60 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19625 30bddbba1922f3d215805633a7e6ff86 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 5.5E-42 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_07060 eef2dccb30bfd24c24a668afadb19e8b 305 TIGRFAM TIGR03323 alt_F1F0_F1_gam: alternate F1F0 ATPase, F1 subunit gamma 8 295 8.0E-123 T 13-10-2018 IPR017709 Alternate ATP synthase, F1 complex, subunit gamma ambt_07060 eef2dccb30bfd24c24a668afadb19e8b 305 SUPERFAMILY SSF52943 8 295 2.62E-51 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07060 eef2dccb30bfd24c24a668afadb19e8b 305 Gene3D G3DSA:1.10.287.80 8 291 3.9E-58 T 13-10-2018 ambt_07060 eef2dccb30bfd24c24a668afadb19e8b 305 Pfam PF00231 ATP synthase 8 295 4.8E-58 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07060 eef2dccb30bfd24c24a668afadb19e8b 305 Gene3D G3DSA:3.40.1380.10 62 210 3.9E-58 T 13-10-2018 ambt_07060 eef2dccb30bfd24c24a668afadb19e8b 305 PRINTS PR00126 ATP synthase gamma subunit signature 273 294 9.0E-17 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07060 eef2dccb30bfd24c24a668afadb19e8b 305 PRINTS PR00126 ATP synthase gamma subunit signature 79 98 9.0E-17 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07060 eef2dccb30bfd24c24a668afadb19e8b 305 PRINTS PR00126 ATP synthase gamma subunit signature 242 261 9.0E-17 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_09815 3c4ad2c27478add2c485897614b2918f 163 Pfam PF01202 Shikimate kinase 9 117 2.5E-12 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ambt_09815 3c4ad2c27478add2c485897614b2918f 163 Gene3D G3DSA:3.40.50.300 1 163 6.8E-54 T 13-10-2018 ambt_09815 3c4ad2c27478add2c485897614b2918f 163 SUPERFAMILY SSF52540 1 160 2.26E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_09815 3c4ad2c27478add2c485897614b2918f 163 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 3 156 5.0E-45 T 13-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 PRINTS PR00959 Mevalonate kinase family signature 24 48 1.6E-44 T 13-10-2018 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 PRINTS PR00959 Mevalonate kinase family signature 326 343 1.6E-44 T 13-10-2018 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 PRINTS PR00959 Mevalonate kinase family signature 117 139 1.6E-44 T 13-10-2018 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 PRINTS PR00959 Mevalonate kinase family signature 160 179 1.6E-44 T 13-10-2018 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 Pfam PF00288 GHMP kinases N terminal domain 113 179 1.1E-14 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 Gene3D G3DSA:3.30.70.890 200 355 1.1E-125 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 119 130 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 Pfam PF08544 GHMP kinases C terminal 278 358 2.5E-9 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 PIRSF PIRSF000530 2 379 8.6E-116 T 13-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 13-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 TIGRFAM TIGR00131 gal_kin: galactokinase 7 377 1.3E-128 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 Hamap MF_00246 Galactokinase [galK]. 24 379 41.924 T 13-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 SUPERFAMILY SSF55060 203 378 1.22E-48 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 Gene3D G3DSA:3.30.230.10 21 199 1.1E-125 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 Pfam PF10509 Galactokinase galactose-binding signature 9 57 1.9E-23 T 13-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 SUPERFAMILY SSF54211 6 200 1.9E-63 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 PRINTS PR00473 Galactokinase signature 110 128 3.1E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 PRINTS PR00473 Galactokinase signature 261 275 3.1E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 PRINTS PR00473 Galactokinase signature 26 44 3.1E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ambt_17370 debe81391ad7af6e7ce052e5462b4bcb 379 PRINTS PR00473 Galactokinase signature 90 101 3.1E-29 T 13-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ambt_12950 695a65b402e15c8c9d6605dcaa58b093 333 SUPERFAMILY SSF51197 175 295 1.43E-8 T 13-10-2018 ambt_12950 695a65b402e15c8c9d6605dcaa58b093 333 Gene3D G3DSA:2.60.120.330 110 310 5.9E-30 T 13-10-2018 IPR027443 Isopenicillin N synthase-like ambt_12950 695a65b402e15c8c9d6605dcaa58b093 333 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 170 297 2.4E-24 T 13-10-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 ambt_07980 7b46d4f2580bd57be7447dd48189eeb0 283 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 280 7.6E-57 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 ambt_07980 7b46d4f2580bd57be7447dd48189eeb0 283 Gene3D G3DSA:3.40.50.150 1 283 1.1E-93 T 13-10-2018 ambt_07980 7b46d4f2580bd57be7447dd48189eeb0 283 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 270 37.878 T 13-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 ambt_07980 7b46d4f2580bd57be7447dd48189eeb0 283 SUPERFAMILY SSF53335 9 277 4.82E-75 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_22235 8597f653d838f655d3de7ca760d63f73 550 Pfam PF02096 60Kd inner membrane protein 363 541 2.8E-57 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR01900 YidC translocation/secretion protein signature 348 364 5.5E-23 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR01900 YidC translocation/secretion protein signature 497 521 5.5E-23 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR01900 YidC translocation/secretion protein signature 477 492 5.5E-23 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR00701 60kDa inner membrane protein signature 260 275 7.8E-90 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR00701 60kDa inner membrane protein signature 471 493 7.8E-90 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR00701 60kDa inner membrane protein signature 85 106 7.8E-90 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR00701 60kDa inner membrane protein signature 2 23 7.8E-90 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR00701 60kDa inner membrane protein signature 508 531 7.8E-90 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR00701 60kDa inner membrane protein signature 227 245 7.8E-90 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR00701 60kDa inner membrane protein signature 173 193 7.8E-90 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR00701 60kDa inner membrane protein signature 424 447 7.8E-90 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 PRINTS PR00701 60kDa inner membrane protein signature 333 353 7.8E-90 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 Pfam PF14849 YidC periplasmic domain 80 351 2.0E-81 T 13-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain ambt_22235 8597f653d838f655d3de7ca760d63f73 550 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 361 6.6E-114 T 13-10-2018 IPR028053 Membrane insertase YidC, N-terminal ambt_22235 8597f653d838f655d3de7ca760d63f73 550 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 362 540 6.2E-67 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_22235 8597f653d838f655d3de7ca760d63f73 550 Gene3D G3DSA:2.70.98.90 75 342 2.4E-92 T 13-10-2018 IPR038221 YidC, periplasmic domain superfamily ambt_22235 8597f653d838f655d3de7ca760d63f73 550 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 544 24.417 T 13-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 ambt_11460 b3e9058e743bdc0648e0cf1e883277c7 662 SUPERFAMILY SSF58104 350 659 2.62E-57 T 13-10-2018 ambt_11460 b3e9058e743bdc0648e0cf1e883277c7 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 623 4.4E-34 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_11460 b3e9058e743bdc0648e0cf1e883277c7 662 Pfam PF08376 Nitrate and nitrite sensing 57 282 1.6E-20 T 13-10-2018 IPR013587 Nitrate/nitrite sensing protein ambt_11460 b3e9058e743bdc0648e0cf1e883277c7 662 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 152 177 8.9E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_11460 b3e9058e743bdc0648e0cf1e883277c7 662 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 524 553 8.9E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_11460 b3e9058e743bdc0648e0cf1e883277c7 662 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 495 522 8.9E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_11460 b3e9058e743bdc0648e0cf1e883277c7 662 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 8.9E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_11460 b3e9058e743bdc0648e0cf1e883277c7 662 SMART SM00304 329 382 2.3E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_11460 b3e9058e743bdc0648e0cf1e883277c7 662 Gene3D G3DSA:1.10.287.950 329 660 1.8E-57 T 13-10-2018 ambt_11460 b3e9058e743bdc0648e0cf1e883277c7 662 SMART SM00283 397 658 2.0E-34 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_21335 71d818fdd21bac46fe337aa24f18eb2f 50 SUPERFAMILY SSF56935 6 50 3.71E-6 T 13-10-2018 ambt_21335 71d818fdd21bac46fe337aa24f18eb2f 50 Gene3D G3DSA:2.40.170.20 2 50 1.5E-5 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_02205 9358b470347ea4865e21213b14edf3cd 362 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 3 352 1.5E-101 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_02205 9358b470347ea4865e21213b14edf3cd 362 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 142 9.3E-44 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_02205 9358b470347ea4865e21213b14edf3cd 362 Gene3D G3DSA:3.40.50.2000 186 341 4.2E-48 T 13-10-2018 ambt_02205 9358b470347ea4865e21213b14edf3cd 362 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 190 343 1.6E-38 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 ambt_02205 9358b470347ea4865e21213b14edf3cd 362 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 358 35.001 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_02205 9358b470347ea4865e21213b14edf3cd 362 Gene3D G3DSA:3.40.50.2000 1 185 1.3E-64 T 13-10-2018 ambt_02205 9358b470347ea4865e21213b14edf3cd 362 SUPERFAMILY SSF53756 3 358 1.65E-114 T 13-10-2018 ambt_17045 8b2b2b3116ddad1af70f691d767cf749 77 Pfam PF13986 Domain of unknown function (DUF4224) 4 48 7.0E-19 T 13-10-2018 IPR025319 Domain of unknown function DUF4224 ambt_08270 be16a1d9d314da71f7d24e817a98e050 226 Gene3D G3DSA:1.10.10.10 136 216 1.9E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_08270 be16a1d9d314da71f7d24e817a98e050 226 SMART SM00419 158 206 1.3E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ambt_08270 be16a1d9d314da71f7d24e817a98e050 226 SUPERFAMILY SSF51206 4 132 1.7E-26 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like ambt_08270 be16a1d9d314da71f7d24e817a98e050 226 SMART SM00100 1 122 1.7E-13 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain ambt_08270 be16a1d9d314da71f7d24e817a98e050 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 164 180 7.6E-13 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ambt_08270 be16a1d9d314da71f7d24e817a98e050 226 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 180 195 7.6E-13 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ambt_08270 be16a1d9d314da71f7d24e817a98e050 226 Pfam PF00027 Cyclic nucleotide-binding domain 22 103 1.2E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain ambt_08270 be16a1d9d314da71f7d24e817a98e050 226 SUPERFAMILY SSF46785 136 212 9.91E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_08270 be16a1d9d314da71f7d24e817a98e050 226 Pfam PF13545 Crp-like helix-turn-helix domain 139 210 1.9E-16 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ambt_08270 be16a1d9d314da71f7d24e817a98e050 226 Gene3D G3DSA:2.60.120.10 14 135 5.5E-43 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_08270 be16a1d9d314da71f7d24e817a98e050 226 ProSitePatterns PS00042 Crp-type HTH domain signature. 166 189 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 2.2E-181 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.2E-33 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 SMART SM01209 103 296 4.7E-137 T 13-10-2018 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 Gene3D G3DSA:3.40.50.20 2 95 4.5E-35 T 13-10-2018 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 331 421 3.9E-30 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 SMART SM01210 330 423 9.9E-56 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 Gene3D G3DSA:3.90.600.10 330 435 5.7E-36 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 SUPERFAMILY SSF51246 329 424 4.29E-34 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 Gene3D G3DSA:3.30.1490.20 121 190 1.1E-28 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 8.0E-84 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.594 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 SUPERFAMILY SSF52440 1 103 2.88E-35 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 Gene3D G3DSA:3.30.470.20 191 329 1.0E-58 T 13-10-2018 ambt_21195 0fdcaba6f32734379edb6180d2fca706 437 SUPERFAMILY SSF56059 104 324 7.6E-65 T 13-10-2018 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 530 3.1E-57 T 13-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 Gene3D G3DSA:3.40.50.620 28 247 3.5E-100 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.1E-264 T 13-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 SUPERFAMILY SSF50715 340 548 2.51E-73 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 5.8E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 5.8E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 5.8E-8 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 9.5E-115 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 Gene3D G3DSA:2.40.240.10 340 547 1.6E-75 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 Gene3D G3DSA:2.40.240.10 348 466 1.6E-75 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 SUPERFAMILY SSF52374 29 346 5.07E-95 T 13-10-2018 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 51.177 T 13-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 Gene3D G3DSA:1.10.1160.10 261 339 1.4E-34 T 13-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 ambt_07675 cdc6c521c4a7760d8ab2b2e28cd336b3 555 Gene3D G3DSA:3.90.800.10 101 209 3.5E-100 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF08309 LVIVD repeat 489 527 5.4E-5 T 13-10-2018 IPR013211 LVIVD ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF08309 LVIVD repeat 448 487 1.9E-5 T 13-10-2018 IPR013211 LVIVD ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF08309 LVIVD repeat 405 446 4.4E-4 T 13-10-2018 IPR013211 LVIVD ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 SUPERFAMILY SSF75011 393 601 1.83E-11 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Gene3D G3DSA:2.60.40.1080 300 395 2.6E-7 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Gene3D G3DSA:2.60.40.1080 106 193 3.6E-11 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 1627 1727 5.5E-8 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 1414 1515 3.4E-15 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 1947 2042 2.4E-8 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 1305 1406 4.4E-11 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 868 971 5.0E-13 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 2161 2267 2.2E-18 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 2273 2375 6.7E-12 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 1740 1841 2.6E-10 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 1520 1621 4.2E-16 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 976 1081 4.2E-16 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 1088 1187 4.6E-14 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 1193 1299 2.2E-18 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 2382 2486 2.8E-13 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 1850 1940 1.3E-6 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Pfam PF13205 Bacterial Ig-like domain 2054 2155 5.5E-11 T 13-10-2018 IPR032812 SbsA, Ig-like domain ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 ProSitePatterns PS00018 EF-hand calcium-binding domain. 823 835 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Gene3D G3DSA:2.60.40.10 708 803 1.2E-16 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Gene3D G3DSA:2.60.40.1220 1101 1187 8.6E-9 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Gene3D G3DSA:2.60.40.1220 1537 1621 9.4E-8 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Gene3D G3DSA:2.60.40.1220 2290 2375 2.3E-6 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Gene3D G3DSA:2.60.40.1220 877 970 5.3E-6 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Gene3D G3DSA:2.60.40.1220 988 1081 5.3E-10 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Gene3D G3DSA:2.60.40.1220 1322 1408 1.2E-6 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Gene3D G3DSA:2.60.40.1220 2171 2268 1.1E-8 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 Gene3D G3DSA:2.60.40.1220 1203 1300 1.1E-8 T 13-10-2018 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 SUPERFAMILY SSF103647 194 303 8.76E-5 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 ambt_03890 1b440c0fb9f57151033a23706fe03da7 2489 SUPERFAMILY SSF49373 131 190 1.57E-8 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 Gene3D G3DSA:3.30.2090.10 179 270 2.6E-250 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 SUPERFAMILY SSF82866 292 500 6.54E-36 T 13-10-2018 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 SUPERFAMILY SSF82714 719 804 6.15E-19 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 SUPERFAMILY SSF82693 46 125 3.14E-19 T 13-10-2018 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 Gene3D G3DSA:3.30.70.1430 563 665 2.6E-250 T 13-10-2018 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 Gene3D G3DSA:1.20.1640.10 12 511 2.6E-250 T 13-10-2018 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 Gene3D G3DSA:3.30.2090.10 717 805 2.6E-250 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 Gene3D G3DSA:3.30.70.1430 42 813 2.6E-250 T 13-10-2018 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 Gene3D G3DSA:1.20.1640.10 512 1038 2.6E-250 T 13-10-2018 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 SUPERFAMILY SSF82693 135 326 5.75E-21 T 13-10-2018 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 SUPERFAMILY SSF82714 183 264 9.29E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 7.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 7.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 PRINTS PR00702 Acriflavin resistance protein family signature 548 565 7.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 7.0E-25 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1047 0.0 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 Gene3D G3DSA:3.30.70.1440 666 863 2.6E-250 T 13-10-2018 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 SUPERFAMILY SSF82866 803 1046 2.88E-44 T 13-10-2018 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 Pfam PF00873 AcrB/AcrD/AcrF family 5 1041 7.1E-225 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_02145 848069e34dc0fc56dff1d1b7d90c5479 1050 Gene3D G3DSA:3.30.70.1320 133 328 2.6E-250 T 13-10-2018 ambt_15965 9b72a73fdf7be6e4c81a5e123da80169 181 SMART SM00479 7 180 1.6E-21 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_15965 9b72a73fdf7be6e4c81a5e123da80169 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 41.921 T 13-10-2018 IPR022894 Oligoribonuclease GO:0000175 ambt_15965 9b72a73fdf7be6e4c81a5e123da80169 181 SUPERFAMILY SSF53098 4 179 2.83E-48 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_15965 9b72a73fdf7be6e4c81a5e123da80169 181 Gene3D G3DSA:3.30.420.10 1 181 1.5E-72 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_15965 9b72a73fdf7be6e4c81a5e123da80169 181 Pfam PF00929 Exonuclease 9 170 4.1E-34 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_08525 bee6bb196e40b33b68bc7aa02d56234b 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 2.3E-152 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ambt_08525 bee6bb196e40b33b68bc7aa02d56234b 361 SUPERFAMILY SSF53383 1 358 1.48E-111 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_08525 bee6bb196e40b33b68bc7aa02d56234b 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 188 207 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ambt_08525 bee6bb196e40b33b68bc7aa02d56234b 361 Pfam PF00266 Aminotransferase class-V 4 349 4.6E-56 T 13-10-2018 IPR000192 Aminotransferase class V domain ambt_08525 bee6bb196e40b33b68bc7aa02d56234b 361 Gene3D G3DSA:3.40.640.10 17 258 3.1E-85 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_08525 bee6bb196e40b33b68bc7aa02d56234b 361 Gene3D G3DSA:3.90.1150.10 259 361 4.2E-41 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_08525 bee6bb196e40b33b68bc7aa02d56234b 361 PIRSF PIRSF000525 1 361 6.8E-147 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ambt_08525 bee6bb196e40b33b68bc7aa02d56234b 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 49.968 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ambt_11590 c4e3e693cbd54d2d8195ead15de6a957 138 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 2 114 5.2E-33 T 13-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 ambt_11590 c4e3e693cbd54d2d8195ead15de6a957 138 Gene3D G3DSA:3.40.30.10 1 138 1.0E-46 T 13-10-2018 ambt_11590 c4e3e693cbd54d2d8195ead15de6a957 138 SUPERFAMILY SSF52833 1 131 1.98E-32 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_11590 c4e3e693cbd54d2d8195ead15de6a957 138 Pfam PF03960 ArsC family 55 112 2.3E-13 T 13-10-2018 IPR006660 Arsenate reductase-like ambt_18540 b2d368159de1bc8cb5ed0b1e9f883650 499 Gene3D G3DSA:3.40.309.10 249 451 8.1E-146 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ambt_18540 b2d368159de1bc8cb5ed0b1e9f883650 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 482 4.4E-195 T 13-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 ambt_18540 b2d368159de1bc8cb5ed0b1e9f883650 499 Pfam PF00171 Aldehyde dehydrogenase family 17 478 2.0E-137 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_18540 b2d368159de1bc8cb5ed0b1e9f883650 499 Gene3D G3DSA:3.40.605.10 23 459 8.1E-146 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_18540 b2d368159de1bc8cb5ed0b1e9f883650 499 SUPERFAMILY SSF53720 2 483 1.96E-143 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_01055 26b48d494021eae857a6751e7fafacdd 384 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 50 359 3.0E-9 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 ambt_01055 26b48d494021eae857a6751e7fafacdd 384 SUPERFAMILY SSF56935 36 384 4.94E-34 T 13-10-2018 ambt_01055 26b48d494021eae857a6751e7fafacdd 384 Gene3D G3DSA:2.40.170.10 33 384 8.0E-29 T 13-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 ambt_01055 26b48d494021eae857a6751e7fafacdd 384 Pfam PF02264 LamB porin 36 384 9.7E-33 T 13-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 ambt_21235 26a986cfad0724cd6adf7d5b49b1ee0b 190 SUPERFAMILY SSF46689 6 71 4.19E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_21235 26a986cfad0724cd6adf7d5b49b1ee0b 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 60 1.5E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_21235 26a986cfad0724cd6adf7d5b49b1ee0b 190 Gene3D G3DSA:1.10.357.10 2 189 4.0E-41 T 13-10-2018 ambt_19805 4439592600c99e977309d2f764326388 313 SUPERFAMILY SSF53474 30 292 8.34E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_19805 4439592600c99e977309d2f764326388 313 Pfam PF00561 alpha/beta hydrolase fold 34 138 1.6E-13 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_19805 4439592600c99e977309d2f764326388 313 Gene3D G3DSA:3.40.50.1820 26 313 2.9E-82 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_09100 4f05a5007d67464676ab6f989b413fea 329 SUPERFAMILY SSF46689 276 326 1.61E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_09100 4f05a5007d67464676ab6f989b413fea 329 SUPERFAMILY SSF46689 226 274 2.37E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_09100 4f05a5007d67464676ab6f989b413fea 329 Pfam PF12833 Helix-turn-helix domain 247 324 1.3E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_09100 4f05a5007d67464676ab6f989b413fea 329 SMART SM00342 240 323 2.3E-24 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_09100 4f05a5007d67464676ab6f989b413fea 329 Gene3D G3DSA:3.40.50.880 1 212 6.6E-47 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_09100 4f05a5007d67464676ab6f989b413fea 329 SUPERFAMILY SSF52317 8 204 7.73E-34 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_09100 4f05a5007d67464676ab6f989b413fea 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 292 307 5.7E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ambt_09100 4f05a5007d67464676ab6f989b413fea 329 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 323 5.7E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ambt_09100 4f05a5007d67464676ab6f989b413fea 329 Gene3D G3DSA:1.10.10.60 221 327 9.7E-29 T 13-10-2018 ambt_09100 4f05a5007d67464676ab6f989b413fea 329 Pfam PF01965 DJ-1/PfpI family 46 170 2.7E-11 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ambt_21380 8fe800940777e9b186161381668bc217 680 PRINTS PR01032 Gene IV protein signature 540 568 1.4E-17 T 13-10-2018 ambt_21380 8fe800940777e9b186161381668bc217 680 PRINTS PR01032 Gene IV protein signature 432 455 1.4E-17 T 13-10-2018 ambt_21380 8fe800940777e9b186161381668bc217 680 PRINTS PR01032 Gene IV protein signature 473 496 1.4E-17 T 13-10-2018 ambt_21380 8fe800940777e9b186161381668bc217 680 PRINTS PR01032 Gene IV protein signature 593 615 1.4E-17 T 13-10-2018 ambt_21380 8fe800940777e9b186161381668bc217 680 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 558 591 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 ambt_21380 8fe800940777e9b186161381668bc217 680 Pfam PF00263 Bacterial type II and III secretion system protein 452 613 1.3E-52 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 ambt_21380 8fe800940777e9b186161381668bc217 680 PRINTS PR00811 Bacterial general secretion pathway protein D signature 483 493 1.4E-36 T 13-10-2018 IPR001775 GspD/PilQ family ambt_21380 8fe800940777e9b186161381668bc217 680 PRINTS PR00811 Bacterial general secretion pathway protein D signature 448 472 1.4E-36 T 13-10-2018 IPR001775 GspD/PilQ family ambt_21380 8fe800940777e9b186161381668bc217 680 PRINTS PR00811 Bacterial general secretion pathway protein D signature 600 614 1.4E-36 T 13-10-2018 IPR001775 GspD/PilQ family ambt_21380 8fe800940777e9b186161381668bc217 680 PRINTS PR00811 Bacterial general secretion pathway protein D signature 577 595 1.4E-36 T 13-10-2018 IPR001775 GspD/PilQ family ambt_21380 8fe800940777e9b186161381668bc217 680 PRINTS PR00811 Bacterial general secretion pathway protein D signature 348 358 1.4E-36 T 13-10-2018 IPR001775 GspD/PilQ family ambt_21380 8fe800940777e9b186161381668bc217 680 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 34 622 1.1E-160 T 13-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 ambt_21380 8fe800940777e9b186161381668bc217 680 Pfam PF03958 Bacterial type II/III secretion system short domain 129 190 5.3E-9 T 13-10-2018 IPR005644 NolW-like ambt_21380 8fe800940777e9b186161381668bc217 680 Pfam PF03958 Bacterial type II/III secretion system short domain 269 348 2.2E-16 T 13-10-2018 IPR005644 NolW-like ambt_21380 8fe800940777e9b186161381668bc217 680 Pfam PF03958 Bacterial type II/III secretion system short domain 194 262 2.9E-13 T 13-10-2018 IPR005644 NolW-like ambt_21380 8fe800940777e9b186161381668bc217 680 Gene3D G3DSA:3.30.1370.120 262 350 4.8E-17 T 13-10-2018 IPR038591 NolW-like superfamily ambt_21380 8fe800940777e9b186161381668bc217 680 Gene3D G3DSA:3.30.1370.120 25 189 1.4E-51 T 13-10-2018 IPR038591 NolW-like superfamily ambt_21380 8fe800940777e9b186161381668bc217 680 Gene3D G3DSA:3.30.1370.120 192 261 2.5E-19 T 13-10-2018 IPR038591 NolW-like superfamily ambt_12055 465e69270434317a2720ccac147948b8 98 SUPERFAMILY SSF55073 3 96 4.08E-22 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_12055 465e69270434317a2720ccac147948b8 98 Gene3D G3DSA:3.30.70.270 1 97 3.8E-26 T 13-10-2018 ambt_12055 465e69270434317a2720ccac147948b8 98 SMART SM00267 1 97 7.6E-4 T 13-10-2018 IPR000160 GGDEF domain ambt_12055 465e69270434317a2720ccac147948b8 98 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 96 5.3E-26 T 13-10-2018 IPR000160 GGDEF domain ambt_12055 465e69270434317a2720ccac147948b8 98 Pfam PF00990 Diguanylate cyclase, GGDEF domain 3 93 3.1E-20 T 13-10-2018 IPR000160 GGDEF domain ambt_08925 0daa370f99038a1da41de1670f91a2f2 820 Gene3D G3DSA:2.40.110.10 237 360 2.1E-97 T 13-10-2018 ambt_08925 0daa370f99038a1da41de1670f91a2f2 820 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 136 233 1.1E-15 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ambt_08925 0daa370f99038a1da41de1670f91a2f2 820 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 507 6.6E-12 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ambt_08925 0daa370f99038a1da41de1670f91a2f2 820 SUPERFAMILY SSF47203 361 516 1.03E-23 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ambt_08925 0daa370f99038a1da41de1670f91a2f2 820 Gene3D G3DSA:1.20.140.10 361 506 2.1E-97 T 13-10-2018 ambt_08925 0daa370f99038a1da41de1670f91a2f2 820 SUPERFAMILY SSF56645 121 356 9.69E-45 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ambt_08925 0daa370f99038a1da41de1670f91a2f2 820 Pfam PF09317 Domain of unknown function (DUF1974) 515 797 1.0E-109 T 13-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 ambt_08925 0daa370f99038a1da41de1670f91a2f2 820 Gene3D G3DSA:1.10.540.10 123 236 2.1E-97 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ambt_02055 8eacfd7935fd2841540ff90d6f848e3e 144 Pfam PF03652 Holliday junction resolvase 8 139 8.9E-42 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ambt_02055 8eacfd7935fd2841540ff90d6f848e3e 144 SUPERFAMILY SSF53098 8 140 3.49E-42 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_02055 8eacfd7935fd2841540ff90d6f848e3e 144 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 7 142 25.146 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ambt_02055 8eacfd7935fd2841540ff90d6f848e3e 144 Gene3D G3DSA:3.30.420.140 5 142 2.7E-44 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 ambt_02055 8eacfd7935fd2841540ff90d6f848e3e 144 SMART SM00732 7 107 1.1E-39 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 ambt_02055 8eacfd7935fd2841540ff90d6f848e3e 144 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 10 139 7.4E-53 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ambt_19325 e0e457f56cd585407836189ec99e98f3 103 ProSitePatterns PS00622 LuxR-type HTH domain signature. 52 79 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_19325 e0e457f56cd585407836189ec99e98f3 103 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 52 68 2.7E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_19325 e0e457f56cd585407836189ec99e98f3 103 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 38 52 2.7E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_19325 e0e457f56cd585407836189ec99e98f3 103 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 68 80 2.7E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_19325 e0e457f56cd585407836189ec99e98f3 103 SUPERFAMILY SSF46894 29 94 7.82E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_19325 e0e457f56cd585407836189ec99e98f3 103 Gene3D G3DSA:1.10.10.10 3 99 7.7E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_19325 e0e457f56cd585407836189ec99e98f3 103 SMART SM00421 35 92 6.7E-22 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_19325 e0e457f56cd585407836189ec99e98f3 103 Pfam PF00196 Bacterial regulatory proteins, luxR family 36 90 7.9E-23 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_20545 72ab0db363ed613b6e5e0765261eca31 452 Gene3D G3DSA:2.160.10.10 225 452 6.4E-66 T 13-10-2018 ambt_20545 72ab0db363ed613b6e5e0765261eca31 452 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 297 5.1E-9 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_20545 72ab0db363ed613b6e5e0765261eca31 452 Pfam PF12804 MobA-like NTP transferase domain 5 125 1.6E-21 T 13-10-2018 IPR025877 MobA-like NTP transferase ambt_20545 72ab0db363ed613b6e5e0765261eca31 452 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ambt_20545 72ab0db363ed613b6e5e0765261eca31 452 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 4.9E-190 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 ambt_20545 72ab0db363ed613b6e5e0765261eca31 452 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 41.721 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 ambt_20545 72ab0db363ed613b6e5e0765261eca31 452 SUPERFAMILY SSF53448 2 249 8.94E-61 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_20545 72ab0db363ed613b6e5e0765261eca31 452 Gene3D G3DSA:3.90.550.10 2 224 8.7E-66 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_20545 72ab0db363ed613b6e5e0765261eca31 452 SUPERFAMILY SSF51161 216 451 5.22E-52 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_20545 72ab0db363ed613b6e5e0765261eca31 452 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 392 425 1.9E-10 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_19520 7dc5b08bf75ae151864347848e1dae6f 239 Pfam PF00563 EAL domain 4 232 5.8E-44 T 13-10-2018 IPR001633 EAL domain ambt_19520 7dc5b08bf75ae151864347848e1dae6f 239 Gene3D G3DSA:3.20.20.450 3 238 9.8E-48 T 13-10-2018 IPR035919 EAL domain superfamily ambt_19520 7dc5b08bf75ae151864347848e1dae6f 239 SMART SM00052 1 237 1.0E-12 T 13-10-2018 IPR001633 EAL domain ambt_19520 7dc5b08bf75ae151864347848e1dae6f 239 SUPERFAMILY SSF141868 9 235 3.66E-46 T 13-10-2018 IPR035919 EAL domain superfamily ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 Pfam PF13328 HD domain 45 183 5.1E-36 T 13-10-2018 IPR003607 HD/PDEase domain ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 Pfam PF13291 ACT domain 648 724 1.4E-18 T 13-10-2018 IPR002912 ACT domain ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 SUPERFAMILY SSF81301 188 400 1.39E-63 T 13-10-2018 ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 SMART SM00954 243 353 3.0E-63 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 Gene3D G3DSA:3.30.460.10 201 333 6.5E-48 T 13-10-2018 ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 50 724 3.6E-182 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 Gene3D G3DSA:1.10.3210.10 45 199 2.4E-38 T 13-10-2018 ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 Gene3D G3DSA:3.30.70.260 648 726 3.9E-16 T 13-10-2018 ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 SUPERFAMILY SSF109604 45 199 4.08E-41 T 13-10-2018 ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 SUPERFAMILY SSF81271 389 455 5.89E-22 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 Pfam PF04607 Region found in RelA / SpoT proteins 243 352 2.1E-36 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 Pfam PF02824 TGS domain 396 455 7.3E-20 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 Gene3D G3DSA:3.10.20.30 390 464 7.3E-32 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_14735 8a38fbf8b9a0e8d7e8ccf394d00ce37b 727 SUPERFAMILY SSF55021 652 724 5.73E-11 T 13-10-2018 ambt_17645 4ad9c0cd19e1a975f25a265d7f466ce2 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 80 1.0E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_17645 4ad9c0cd19e1a975f25a265d7f466ce2 222 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 166 213 6.3E-5 T 13-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type ambt_17645 4ad9c0cd19e1a975f25a265d7f466ce2 222 SUPERFAMILY SSF46689 29 105 4.19E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_17645 4ad9c0cd19e1a975f25a265d7f466ce2 222 Gene3D G3DSA:1.10.357.10 18 218 6.6E-47 T 13-10-2018 ambt_17645 4ad9c0cd19e1a975f25a265d7f466ce2 222 SUPERFAMILY SSF48498 101 213 3.71E-8 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ambt_17645 4ad9c0cd19e1a975f25a265d7f466ce2 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 47 7.0E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_17645 4ad9c0cd19e1a975f25a265d7f466ce2 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 55 78 7.0E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_08800 d8542ce8ff534a9569aa99dc84443c75 395 Pfam PF00043 Glutathione S-transferase, C-terminal domain 180 242 1.9E-5 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_08800 d8542ce8ff534a9569aa99dc84443c75 395 Gene3D G3DSA:3.40.30.10 3 79 3.1E-6 T 13-10-2018 ambt_08800 d8542ce8ff534a9569aa99dc84443c75 395 SUPERFAMILY SSF47616 157 242 8.63E-9 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_08800 d8542ce8ff534a9569aa99dc84443c75 395 SUPERFAMILY SSF52833 3 112 3.39E-11 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_08800 d8542ce8ff534a9569aa99dc84443c75 395 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 1.9E-9 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_08800 d8542ce8ff534a9569aa99dc84443c75 395 Gene3D G3DSA:1.20.1050.10 99 241 7.8E-12 T 13-10-2018 ambt_17575 5af21387df9778e416f286a07c42d13e 173 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 17 160 1.7E-27 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ambt_17575 5af21387df9778e416f286a07c42d13e 173 Gene3D G3DSA:2.40.50.140 13 125 3.4E-23 T 13-10-2018 ambt_17575 5af21387df9778e416f286a07c42d13e 173 SUPERFAMILY SSF50249 17 164 1.82E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_17575 5af21387df9778e416f286a07c42d13e 173 Pfam PF00436 Single-strand binding protein family 17 106 3.5E-18 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 SUPERFAMILY SSF82866 657 845 4.32E-38 T 13-10-2018 ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 Gene3D G3DSA:3.30.70.3400 165 349 5.5E-56 T 13-10-2018 ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 PRINTS PR01755 Bacterial translocase SecF protein signature 748 766 8.4E-25 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 PRINTS PR01755 Bacterial translocase SecF protein signature 780 795 8.4E-25 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 PRINTS PR01755 Bacterial translocase SecF protein signature 700 714 8.4E-25 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 PRINTS PR01755 Bacterial translocase SecF protein signature 571 586 8.4E-25 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 Gene3D G3DSA:1.20.1640.10 675 863 8.0E-19 T 13-10-2018 ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 279 509 1.3E-75 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 Pfam PF02355 Protein export membrane protein 656 841 7.7E-51 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 Pfam PF02355 Protein export membrane protein 350 515 5.4E-18 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 544 843 24.34 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 Gene3D G3DSA:1.20.1640.10 350 529 1.5E-17 T 13-10-2018 ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 Gene3D G3DSA:3.30.1360.200 221 347 5.5E-56 T 13-10-2018 ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 SUPERFAMILY SSF82866 265 522 2.09E-41 T 13-10-2018 ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 516 2.3E-131 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 Pfam PF07549 SecD/SecF GG Motif 567 588 1.8E-6 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 Pfam PF07549 SecD/SecF GG Motif 44 64 3.3E-5 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 531 40.851 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ambt_14460 c1264f1a72fc96c6caa65eb69900be48 866 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 572 831 2.2E-59 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ambt_14020 d532ff3e0d9cc823d3d64055962570da 407 SUPERFAMILY SSF109604 153 311 4.57E-22 T 13-10-2018 ambt_14020 d532ff3e0d9cc823d3d64055962570da 407 Gene3D G3DSA:1.10.3210.10 4 323 8.2E-60 T 13-10-2018 ambt_14020 d532ff3e0d9cc823d3d64055962570da 407 Pfam PF11871 Domain of unknown function (DUF3391) 2 128 5.5E-16 T 13-10-2018 IPR021812 Protein of unknown function DUF3391 ambt_14020 d532ff3e0d9cc823d3d64055962570da 407 Pfam PF13487 HD domain 214 275 2.7E-14 T 13-10-2018 ambt_08485 9d515b8a79d94124b4210f7f935a0d58 231 Gene3D G3DSA:3.20.20.70 1 230 4.1E-83 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_08485 9d515b8a79d94124b4210f7f935a0d58 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 13-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_08485 9d515b8a79d94124b4210f7f935a0d58 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 8.2E-51 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_08485 9d515b8a79d94124b4210f7f935a0d58 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 1.3E-59 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_08485 9d515b8a79d94124b4210f7f935a0d58 231 SMART SM00934 5 226 1.9E-96 T 13-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_08485 9d515b8a79d94124b4210f7f935a0d58 231 SUPERFAMILY SSF51366 2 229 1.07E-74 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ambt_08485 9d515b8a79d94124b4210f7f935a0d58 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 38.94 T 13-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_12230 0faf10237a9e94d5ac0e0b4356e0d92d 119 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_12230 0faf10237a9e94d5ac0e0b4356e0d92d 119 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 31.427 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12230 0faf10237a9e94d5ac0e0b4356e0d92d 119 Gene3D G3DSA:2.30.30.790 2 119 3.0E-14 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12230 0faf10237a9e94d5ac0e0b4356e0d92d 119 PRINTS PR00061 Ribosomal protein L19 signature 8 37 4.5E-41 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12230 0faf10237a9e94d5ac0e0b4356e0d92d 119 PRINTS PR00061 Ribosomal protein L19 signature 38 67 4.5E-41 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12230 0faf10237a9e94d5ac0e0b4356e0d92d 119 PRINTS PR00061 Ribosomal protein L19 signature 92 117 4.5E-41 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12230 0faf10237a9e94d5ac0e0b4356e0d92d 119 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 7 117 4.0E-51 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12230 0faf10237a9e94d5ac0e0b4356e0d92d 119 PIRSF PIRSF002191 1 119 1.3E-50 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12230 0faf10237a9e94d5ac0e0b4356e0d92d 119 Pfam PF01245 Ribosomal protein L19 8 117 5.1E-50 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12230 0faf10237a9e94d5ac0e0b4356e0d92d 119 SUPERFAMILY SSF50104 6 118 1.5E-46 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily ambt_02135 930da74f09c87569906ec6fa0c3c0bac 477 Gene3D G3DSA:1.20.1600.10 40 444 2.6E-38 T 13-10-2018 ambt_02135 930da74f09c87569906ec6fa0c3c0bac 477 Pfam PF02321 Outer membrane efflux protein 269 443 1.4E-15 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_02135 930da74f09c87569906ec6fa0c3c0bac 477 Pfam PF02321 Outer membrane efflux protein 46 228 5.3E-10 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_02135 930da74f09c87569906ec6fa0c3c0bac 477 SUPERFAMILY SSF56954 23 443 9.81E-41 T 13-10-2018 ambt_19190 c0f7ad5624444463b42e09b59a2bb1ce 324 Gene3D G3DSA:3.40.190.10 102 200 7.4E-11 T 13-10-2018 ambt_19190 c0f7ad5624444463b42e09b59a2bb1ce 324 Gene3D G3DSA:3.40.190.10 28 237 7.4E-11 T 13-10-2018 ambt_19190 c0f7ad5624444463b42e09b59a2bb1ce 324 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 237 8.5E-8 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_19190 c0f7ad5624444463b42e09b59a2bb1ce 324 SUPERFAMILY SSF53850 25 237 3.58E-15 T 13-10-2018 ambt_13130 e91feecb5c6838121417a7d0bbace610 314 Gene3D G3DSA:3.40.190.10 99 298 1.8E-55 T 13-10-2018 ambt_13130 e91feecb5c6838121417a7d0bbace610 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 5.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_13130 e91feecb5c6838121417a7d0bbace610 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 5.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_13130 e91feecb5c6838121417a7d0bbace610 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 5.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_13130 e91feecb5c6838121417a7d0bbace610 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.2E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_13130 e91feecb5c6838121417a7d0bbace610 314 SUPERFAMILY SSF53850 99 304 9.5E-41 T 13-10-2018 ambt_13130 e91feecb5c6838121417a7d0bbace610 314 SUPERFAMILY SSF46785 7 118 1.23E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_13130 e91feecb5c6838121417a7d0bbace610 314 Pfam PF03466 LysR substrate binding domain 99 298 8.9E-44 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_13130 e91feecb5c6838121417a7d0bbace610 314 Gene3D G3DSA:3.40.190.10 168 269 1.8E-55 T 13-10-2018 ambt_13130 e91feecb5c6838121417a7d0bbace610 314 Gene3D G3DSA:1.10.10.10 4 91 1.9E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_05650 703767f846864ad70fc8e52e65723e27 136 SUPERFAMILY SSF53850 18 132 1.71E-13 T 13-10-2018 ambt_05650 703767f846864ad70fc8e52e65723e27 136 Gene3D G3DSA:3.40.190.10 19 135 6.8E-10 T 13-10-2018 ambt_06095 09528e8b7de854ccf984abaa04032b60 621 Gene3D G3DSA:1.10.640.10 96 621 5.6E-159 T 13-10-2018 IPR037120 Haem peroxidase domain superfamily, animal type ambt_06095 09528e8b7de854ccf984abaa04032b60 621 PRINTS PR00457 Animal haem peroxidase signature 134 145 1.4E-30 T 13-10-2018 IPR019791 Haem peroxidase, animal type ambt_06095 09528e8b7de854ccf984abaa04032b60 621 PRINTS PR00457 Animal haem peroxidase signature 400 410 1.4E-30 T 13-10-2018 IPR019791 Haem peroxidase, animal type ambt_06095 09528e8b7de854ccf984abaa04032b60 621 PRINTS PR00457 Animal haem peroxidase signature 523 543 1.4E-30 T 13-10-2018 IPR019791 Haem peroxidase, animal type ambt_06095 09528e8b7de854ccf984abaa04032b60 621 PRINTS PR00457 Animal haem peroxidase signature 307 325 1.4E-30 T 13-10-2018 IPR019791 Haem peroxidase, animal type ambt_06095 09528e8b7de854ccf984abaa04032b60 621 PRINTS PR00457 Animal haem peroxidase signature 325 345 1.4E-30 T 13-10-2018 IPR019791 Haem peroxidase, animal type ambt_06095 09528e8b7de854ccf984abaa04032b60 621 PRINTS PR00457 Animal haem peroxidase signature 350 376 1.4E-30 T 13-10-2018 IPR019791 Haem peroxidase, animal type ambt_06095 09528e8b7de854ccf984abaa04032b60 621 PRINTS PR00457 Animal haem peroxidase signature 180 195 1.4E-30 T 13-10-2018 IPR019791 Haem peroxidase, animal type ambt_06095 09528e8b7de854ccf984abaa04032b60 621 SUPERFAMILY SSF48113 109 620 5.42E-143 T 13-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 ambt_06095 09528e8b7de854ccf984abaa04032b60 621 Pfam PF03098 Animal haem peroxidase 111 618 5.0E-151 T 13-10-2018 IPR019791 Haem peroxidase, animal type ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 SUPERFAMILY SSF54534 88 241 4.32E-38 T 13-10-2018 ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 Gene3D G3DSA:3.10.50.40 150 246 1.7E-100 T 13-10-2018 ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 PIRSF PIRSF003095 1 434 2.9E-129 T 13-10-2018 IPR005215 Trigger factor GO:0015031 ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 SUPERFAMILY SSF102735 1 131 3.79E-41 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 155 237 2.0E-15 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 TIGRFAM TIGR00115 tig: trigger factor 11 414 5.0E-144 T 13-10-2018 IPR005215 Trigger factor GO:0015031 ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 Gene3D G3DSA:1.10.3120.10 116 419 1.7E-100 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 SUPERFAMILY SSF109998 248 431 2.45E-46 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 Hamap MF_00303 Trigger factor [tig]. 1 420 22.027 T 13-10-2018 IPR005215 Trigger factor GO:0015031 ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 415 1.2E-38 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 141 8.8E-42 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 ambt_04055 e0ffffb68f2229ff78aff612dc41aadd 434 Gene3D G3DSA:3.30.70.1050 1 115 7.2E-41 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 ambt_21780 09c1cfe8eb8990d1aaba57cc4e52cc10 310 Gene3D G3DSA:3.20.10.10 139 289 2.8E-94 T 13-10-2018 ambt_21780 09c1cfe8eb8990d1aaba57cc4e52cc10 310 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 308 3.4E-132 T 13-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 ambt_21780 09c1cfe8eb8990d1aaba57cc4e52cc10 310 Pfam PF01063 Amino-transferase class IV 36 269 7.6E-43 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ambt_21780 09c1cfe8eb8990d1aaba57cc4e52cc10 310 ProSitePatterns PS00770 Aminotransferases class-IV signature. 195 224 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 ambt_21780 09c1cfe8eb8990d1aaba57cc4e52cc10 310 Gene3D G3DSA:3.30.470.10 10 128 2.8E-94 T 13-10-2018 ambt_21780 09c1cfe8eb8990d1aaba57cc4e52cc10 310 SUPERFAMILY SSF56752 7 305 2.35E-95 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ambt_02605 ed08c28379d7d78077bc8c6b648e9634 414 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ambt_02605 ed08c28379d7d78077bc8c6b648e9634 414 SMART SM00490 257 338 1.6E-27 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_02605 ed08c28379d7d78077bc8c6b648e9634 414 SMART SM00487 20 221 1.4E-58 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_02605 ed08c28379d7d78077bc8c6b648e9634 414 Pfam PF00271 Helicase conserved C-terminal domain 230 337 5.3E-25 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_02605 ed08c28379d7d78077bc8c6b648e9634 414 Gene3D G3DSA:3.40.50.300 213 390 1.3E-46 T 13-10-2018 ambt_02605 ed08c28379d7d78077bc8c6b648e9634 414 SUPERFAMILY SSF52540 74 359 1.67E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02605 ed08c28379d7d78077bc8c6b648e9634 414 Pfam PF00270 DEAD/DEAH box helicase 26 195 5.2E-51 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_02605 ed08c28379d7d78077bc8c6b648e9634 414 Gene3D G3DSA:3.40.50.300 1 209 5.4E-76 T 13-10-2018 ambt_21460 ab7188a529add3924bcc29ae19979aa1 282 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 36.949 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 ambt_21460 ab7188a529add3924bcc29ae19979aa1 282 Gene3D G3DSA:3.40.190.80 159 265 6.3E-22 T 13-10-2018 ambt_21460 ab7188a529add3924bcc29ae19979aa1 282 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 7.5E-14 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_21460 ab7188a529add3924bcc29ae19979aa1 282 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 7.5E-14 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_21460 ab7188a529add3924bcc29ae19979aa1 282 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 7.5E-14 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_21460 ab7188a529add3924bcc29ae19979aa1 282 PRINTS PR00377 Inositol monophosphatase superfamily signature 217 241 7.5E-14 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_21460 ab7188a529add3924bcc29ae19979aa1 282 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 7.5E-14 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_21460 ab7188a529add3924bcc29ae19979aa1 282 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 14 260 5.4E-87 T 13-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 ambt_21460 ab7188a529add3924bcc29ae19979aa1 282 SUPERFAMILY SSF56655 8 271 9.82E-74 T 13-10-2018 ambt_21460 ab7188a529add3924bcc29ae19979aa1 282 Gene3D G3DSA:3.30.540.10 7 158 4.5E-46 T 13-10-2018 ambt_21460 ab7188a529add3924bcc29ae19979aa1 282 Pfam PF00459 Inositol monophosphatase family 8 253 4.2E-48 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ambt_01330 198e9550dcfa168e3871e5cf70be88c7 1046 SUPERFAMILY SSF50939 35 410 3.33E-63 T 13-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 ambt_01330 198e9550dcfa168e3871e5cf70be88c7 1046 Gene3D G3DSA:2.130.10.10 37 264 8.2E-42 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_01330 198e9550dcfa168e3871e5cf70be88c7 1046 Gene3D G3DSA:2.130.10.10 489 705 3.8E-39 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_01330 198e9550dcfa168e3871e5cf70be88c7 1046 Gene3D G3DSA:2.130.10.10 265 432 6.0E-21 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_01330 198e9550dcfa168e3871e5cf70be88c7 1046 SUPERFAMILY SSF110296 310 707 1.15E-53 T 13-10-2018 ambt_12510 7c8169cbef5eb5c8b35523e3c5118175 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 5.5E-87 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 ambt_12510 7c8169cbef5eb5c8b35523e3c5118175 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 190 8.0E-60 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 ambt_12510 7c8169cbef5eb5c8b35523e3c5118175 193 PIRSF PIRSF006102 1 193 6.4E-60 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 ambt_12510 7c8169cbef5eb5c8b35523e3c5118175 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 25.928 T 13-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 ambt_08000 3b41d4b9ccdb86bbb34276685e7bb3b1 373 Pfam PF00266 Aminotransferase class-V 28 339 3.2E-37 T 13-10-2018 IPR000192 Aminotransferase class V domain ambt_08000 3b41d4b9ccdb86bbb34276685e7bb3b1 373 PIRSF PIRSF000524 5 373 3.1E-111 T 13-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 ambt_08000 3b41d4b9ccdb86bbb34276685e7bb3b1 373 Gene3D G3DSA:3.40.640.10 23 271 3.1E-143 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_08000 3b41d4b9ccdb86bbb34276685e7bb3b1 373 SUPERFAMILY SSF53383 11 373 1.3E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_08000 3b41d4b9ccdb86bbb34276685e7bb3b1 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 190 210 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ambt_08000 3b41d4b9ccdb86bbb34276685e7bb3b1 373 Gene3D G3DSA:3.90.1150.10 10 369 3.1E-143 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_07195 93aa70bc504e92a5eadf663e81b29254 227 Gene3D G3DSA:1.10.10.10 123 227 3.9E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_07195 93aa70bc504e92a5eadf663e81b29254 227 SMART SM00862 145 220 5.2E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_07195 93aa70bc504e92a5eadf663e81b29254 227 Pfam PF00072 Response regulator receiver domain 3 113 6.2E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_07195 93aa70bc504e92a5eadf663e81b29254 227 Gene3D G3DSA:3.40.50.2300 1 121 6.7E-39 T 13-10-2018 ambt_07195 93aa70bc504e92a5eadf663e81b29254 227 SMART SM00448 1 112 6.6E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_07195 93aa70bc504e92a5eadf663e81b29254 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 5.6E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_07195 93aa70bc504e92a5eadf663e81b29254 227 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 220 5.7E-103 T 13-10-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 ambt_07195 93aa70bc504e92a5eadf663e81b29254 227 SUPERFAMILY SSF52172 1 118 4.84E-38 T 13-10-2018 IPR011006 CheY-like superfamily ambt_07195 93aa70bc504e92a5eadf663e81b29254 227 SUPERFAMILY SSF46894 118 221 9.92E-30 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_21025 92a7c55af67f43d54195c12f5d0557fb 632 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 232 433 4.6E-15 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 ambt_21025 92a7c55af67f43d54195c12f5d0557fb 632 SUPERFAMILY SSF52833 513 629 5.47E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_21025 92a7c55af67f43d54195c12f5d0557fb 632 Pfam PF13899 Thioredoxin-like 520 604 1.3E-11 T 13-10-2018 ambt_21025 92a7c55af67f43d54195c12f5d0557fb 632 Gene3D G3DSA:3.40.30.10 505 631 9.9E-29 T 13-10-2018 ambt_21025 92a7c55af67f43d54195c12f5d0557fb 632 Gene3D G3DSA:2.60.40.1250 53 186 2.0E-42 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily ambt_21025 92a7c55af67f43d54195c12f5d0557fb 632 Pfam PF11412 Disulphide bond corrector protein DsbC 59 169 7.9E-32 T 13-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ambt_21025 92a7c55af67f43d54195c12f5d0557fb 632 SUPERFAMILY SSF74863 58 172 4.18E-38 T 13-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily ambt_21025 92a7c55af67f43d54195c12f5d0557fb 632 ProSitePatterns PS00194 Thioredoxin family active site. 540 558 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ambt_21025 92a7c55af67f43d54195c12f5d0557fb 632 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 632 34.222 T 13-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 ambt_13390 7fe99a672c12121c3330afc76d13c4c8 255 Gene3D G3DSA:2.60.120.620 1 244 1.1E-41 T 13-10-2018 ambt_13390 7fe99a672c12121c3330afc76d13c4c8 255 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 14 192 1.4E-19 T 13-10-2018 IPR008775 Phytanoyl-CoA dioxygenase ambt_13390 7fe99a672c12121c3330afc76d13c4c8 255 SUPERFAMILY SSF51197 8 239 3.23E-42 T 13-10-2018 ambt_02405 bd020dda011ab8526a03637c50f3317f 313 Gene3D G3DSA:3.90.245.10 1 312 2.2E-104 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like ambt_02405 bd020dda011ab8526a03637c50f3317f 313 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 303 2.9E-80 T 13-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ambt_02405 bd020dda011ab8526a03637c50f3317f 313 SUPERFAMILY SSF53590 1 311 2.49E-91 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like ambt_06310 4d21241332edf60e470bbd1be9123fca 93 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 89 8.8E-12 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ambt_06310 4d21241332edf60e470bbd1be9123fca 93 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 89 5.9E-14 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ambt_06310 4d21241332edf60e470bbd1be9123fca 93 Gene3D G3DSA:3.30.2310.20 1 90 4.0E-16 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ambt_16835 37eb2e7f89340f9ed5b85a3cbd642f12 133 Pfam PF00717 Peptidase S24-like 46 94 2.8E-8 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ambt_16835 37eb2e7f89340f9ed5b85a3cbd642f12 133 Gene3D G3DSA:2.10.109.10 14 127 6.3E-31 T 13-10-2018 ambt_16835 37eb2e7f89340f9ed5b85a3cbd642f12 133 SUPERFAMILY SSF51306 3 124 5.93E-21 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ambt_17995 6741ef5d656a353a44a2fd4c1073196a 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 4.6E-13 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_17995 6741ef5d656a353a44a2fd4c1073196a 308 Gene3D G3DSA:3.40.190.10 99 286 1.0E-41 T 13-10-2018 ambt_17995 6741ef5d656a353a44a2fd4c1073196a 308 SUPERFAMILY SSF53850 96 301 1.33E-34 T 13-10-2018 ambt_17995 6741ef5d656a353a44a2fd4c1073196a 308 Pfam PF03466 LysR substrate binding domain 94 300 5.2E-33 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_17995 6741ef5d656a353a44a2fd4c1073196a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_17995 6741ef5d656a353a44a2fd4c1073196a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_17995 6741ef5d656a353a44a2fd4c1073196a 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_17995 6741ef5d656a353a44a2fd4c1073196a 308 SUPERFAMILY SSF46785 5 117 1.48E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_17995 6741ef5d656a353a44a2fd4c1073196a 308 Gene3D G3DSA:1.10.10.10 6 94 6.3E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_17995 6741ef5d656a353a44a2fd4c1073196a 308 Gene3D G3DSA:3.40.190.10 172 274 1.0E-41 T 13-10-2018 ambt_06635 fbc0e5c4e5c61b023d2a788efb1bf116 372 SUPERFAMILY SSF82689 252 348 1.96E-17 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ambt_06635 fbc0e5c4e5c61b023d2a788efb1bf116 372 SUPERFAMILY SSF50182 178 243 1.37E-15 T 13-10-2018 IPR010920 LSM domain superfamily ambt_06635 fbc0e5c4e5c61b023d2a788efb1bf116 372 Pfam PF00924 Mechanosensitive ion channel 135 338 8.8E-42 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ambt_06635 fbc0e5c4e5c61b023d2a788efb1bf116 372 Gene3D G3DSA:3.30.70.100 247 343 3.7E-15 T 13-10-2018 ambt_06635 fbc0e5c4e5c61b023d2a788efb1bf116 372 Gene3D G3DSA:2.30.30.60 193 243 4.6E-11 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ambt_06635 fbc0e5c4e5c61b023d2a788efb1bf116 372 SUPERFAMILY SSF82861 98 176 1.44E-10 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 SMART SM00387 257 375 2.6E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_05950 b06d535ee6dff425094f9080ee189bef 661 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 373 9.4E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_05950 b06d535ee6dff425094f9080ee189bef 661 SUPERFAMILY SSF55874 199 371 8.64E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_05950 b06d535ee6dff425094f9080ee189bef 661 Gene3D G3DSA:3.40.50.2300 393 527 5.1E-31 T 13-10-2018 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 Gene3D G3DSA:3.40.50.2300 534 661 6.2E-25 T 13-10-2018 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 Gene3D G3DSA:3.40.50.2300 1 137 3.2E-21 T 13-10-2018 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 Pfam PF00512 His Kinase A (phospho-acceptor) domain 146 208 1.7E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 SUPERFAMILY SSF52172 5 139 2.99E-22 T 13-10-2018 IPR011006 CheY-like superfamily ambt_05950 b06d535ee6dff425094f9080ee189bef 661 SUPERFAMILY SSF52172 551 660 3.7E-25 T 13-10-2018 IPR011006 CheY-like superfamily ambt_05950 b06d535ee6dff425094f9080ee189bef 661 Pfam PF00072 Response regulator receiver domain 7 109 4.8E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 Pfam PF00072 Response regulator receiver domain 405 519 3.9E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 Pfam PF00072 Response regulator receiver domain 553 660 7.7E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 SUPERFAMILY SSF47384 136 210 2.94E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 SMART SM00388 145 210 8.0E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 SUPERFAMILY SSF52172 404 523 3.13E-28 T 13-10-2018 IPR011006 CheY-like superfamily ambt_05950 b06d535ee6dff425094f9080ee189bef 661 SMART SM00448 5 120 3.0E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 SMART SM00448 551 660 2.6E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 SMART SM00448 403 519 2.9E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 Gene3D G3DSA:3.30.565.10 212 374 2.2E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_05950 b06d535ee6dff425094f9080ee189bef 661 Gene3D G3DSA:1.10.287.130 138 211 1.2E-21 T 13-10-2018 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 353 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 314 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 328 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05950 b06d535ee6dff425094f9080ee189bef 661 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 372 1.1E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 Pfam PF14450 Cell division protein FtsA 207 374 1.5E-24 T 13-10-2018 ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 Gene3D G3DSA:3.30.420.40 197 352 2.2E-119 T 13-10-2018 ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 SUPERFAMILY SSF53067 198 377 2.0E-48 T 13-10-2018 ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 5.3E-153 T 13-10-2018 IPR020823 Cell division protein FtsA ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 Gene3D G3DSA:3.30.420.40 13 372 2.2E-119 T 13-10-2018 ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 409 29.812 T 13-10-2018 IPR020823 Cell division protein FtsA ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 PIRSF PIRSF003101 1 409 3.5E-153 T 13-10-2018 IPR020823 Cell division protein FtsA ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 SMART SM00842 10 196 4.6E-99 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 Gene3D G3DSA:3.30.1490.110 87 169 2.2E-119 T 13-10-2018 ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 8.4E-32 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 SUPERFAMILY SSF53067 8 221 1.04E-56 T 13-10-2018 ambt_02225 40e2cfa1bd18ad2e2c04385ed1f23710 409 Gene3D G3DSA:3.90.640.10 235 300 2.2E-119 T 13-10-2018 ambt_02185 2f3082d08e9945d094f5f1ffd4731bbc 471 SUPERFAMILY SSF53623 101 310 3.66E-52 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_02185 2f3082d08e9945d094f5f1ffd4731bbc 471 Gene3D G3DSA:3.40.1190.10 81 313 3.9E-71 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_02185 2f3082d08e9945d094f5f1ffd4731bbc 471 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 453 1.6E-131 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_02185 2f3082d08e9945d094f5f1ffd4731bbc 471 Pfam PF02875 Mur ligase family, glutamate ligase domain 315 382 2.9E-11 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ambt_02185 2f3082d08e9945d094f5f1ffd4731bbc 471 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 455 32.561 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_02185 2f3082d08e9945d094f5f1ffd4731bbc 471 SUPERFAMILY SSF63418 1 94 4.97E-24 T 13-10-2018 IPR035911 MurE/MurF, N-terminal ambt_02185 2f3082d08e9945d094f5f1ffd4731bbc 471 Pfam PF01225 Mur ligase family, catalytic domain 24 78 7.9E-10 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ambt_02185 2f3082d08e9945d094f5f1ffd4731bbc 471 Pfam PF08245 Mur ligase middle domain 105 294 1.2E-46 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ambt_02185 2f3082d08e9945d094f5f1ffd4731bbc 471 Gene3D G3DSA:3.40.1390.10 1 80 4.8E-24 T 13-10-2018 ambt_02185 2f3082d08e9945d094f5f1ffd4731bbc 471 Gene3D G3DSA:3.90.190.20 314 458 8.3E-40 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_02185 2f3082d08e9945d094f5f1ffd4731bbc 471 SUPERFAMILY SSF53244 315 454 1.71E-32 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_06055 d252bd6a25748b0b0d7278978ff24632 1205 SUPERFAMILY SSF52540 2 342 1.49E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_06055 d252bd6a25748b0b0d7278978ff24632 1205 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 965 2.3E-216 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 ambt_06055 d252bd6a25748b0b0d7278978ff24632 1205 SUPERFAMILY SSF52540 361 800 3.98E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_06055 d252bd6a25748b0b0d7278978ff24632 1205 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1107 17.324 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 ambt_06055 d252bd6a25748b0b0d7278978ff24632 1205 Gene3D G3DSA:1.10.10.160 80 197 1.6E-83 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily ambt_06055 d252bd6a25748b0b0d7278978ff24632 1205 PIRSF PIRSF000980 1 1096 1.8E-237 T 13-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 ambt_06055 d252bd6a25748b0b0d7278978ff24632 1205 SUPERFAMILY SSF52980 845 1083 4.02E-13 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ambt_06055 d252bd6a25748b0b0d7278978ff24632 1205 Gene3D G3DSA:1.10.486.10 456 666 1.2E-144 T 13-10-2018 ambt_06055 d252bd6a25748b0b0d7278978ff24632 1205 Gene3D G3DSA:3.40.50.10930 4 307 1.6E-83 T 13-10-2018 ambt_06055 d252bd6a25748b0b0d7278978ff24632 1205 Gene3D G3DSA:3.40.50.300 332 795 1.2E-144 T 13-10-2018 ambt_06055 d252bd6a25748b0b0d7278978ff24632 1205 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 794 5.3E-238 T 13-10-2018 ambt_19450 ca7c54f92c0ed769d31720f87d98bb4b 218 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 152 158 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ambt_19450 ca7c54f92c0ed769d31720f87d98bb4b 218 Pfam PF03602 Conserved hypothetical protein 95 36 215 3.0E-56 T 13-10-2018 ambt_19450 ca7c54f92c0ed769d31720f87d98bb4b 218 SUPERFAMILY SSF53335 36 213 2.09E-49 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_19450 ca7c54f92c0ed769d31720f87d98bb4b 218 Gene3D G3DSA:3.40.50.150 24 217 1.2E-56 T 13-10-2018 ambt_19450 ca7c54f92c0ed769d31720f87d98bb4b 218 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 33 213 6.2E-58 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 ambt_19450 ca7c54f92c0ed769d31720f87d98bb4b 218 PIRSF PIRSF004553 35 217 2.2E-49 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 ambt_17640 656995f8a7281072fe8612d7bc56976d 123 Pfam PF09722 Protein of unknown function (DUF2384) 70 121 4.8E-9 T 13-10-2018 IPR024467 Domain of unknown function DUF2384 ambt_01650 46ccafa61084f6d376e4fa12720675f4 319 SUPERFAMILY SSF53807 77 318 2.2E-44 T 13-10-2018 ambt_01650 46ccafa61084f6d376e4fa12720675f4 319 Gene3D G3DSA:3.40.50.1980 195 319 2.9E-21 T 13-10-2018 ambt_01650 46ccafa61084f6d376e4fa12720675f4 319 Gene3D G3DSA:3.40.50.1980 75 194 8.0E-32 T 13-10-2018 ambt_01650 46ccafa61084f6d376e4fa12720675f4 319 Pfam PF01497 Periplasmic binding protein 78 271 4.1E-21 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain ambt_14875 f7f5cfabf052e6ca141a6a53f18ecb15 441 SMART SM00028 381 414 54.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_14875 f7f5cfabf052e6ca141a6a53f18ecb15 441 SMART SM00028 169 202 120.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_14875 f7f5cfabf052e6ca141a6a53f18ecb15 441 SMART SM00028 345 378 300.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_14875 f7f5cfabf052e6ca141a6a53f18ecb15 441 SMART SM00028 133 166 77.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_14875 f7f5cfabf052e6ca141a6a53f18ecb15 441 SMART SM00028 95 128 0.13 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_14875 f7f5cfabf052e6ca141a6a53f18ecb15 441 Gene3D G3DSA:1.25.40.10 37 161 3.2E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_14875 f7f5cfabf052e6ca141a6a53f18ecb15 441 SUPERFAMILY SSF48452 93 199 3.26E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_14875 f7f5cfabf052e6ca141a6a53f18ecb15 441 Gene3D G3DSA:1.25.40.10 172 272 4.7E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_14875 f7f5cfabf052e6ca141a6a53f18ecb15 441 Pfam PF13432 Tetratricopeptide repeat 350 408 1.7E-4 T 13-10-2018 ambt_14875 f7f5cfabf052e6ca141a6a53f18ecb15 441 SUPERFAMILY SSF81901 176 417 2.28E-10 T 13-10-2018 ambt_14875 f7f5cfabf052e6ca141a6a53f18ecb15 441 Gene3D G3DSA:1.25.40.10 282 431 7.7E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_19595 919ac2729991f1f346be50fb77da4063 522 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 32 440 9.1E-62 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_19595 919ac2729991f1f346be50fb77da4063 522 Pfam PF00474 Sodium:solute symporter family 32 438 3.1E-40 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_19595 919ac2729991f1f346be50fb77da4063 522 Gene3D G3DSA:1.20.1730.10 11 521 4.0E-100 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 Pfam PF00391 PEP-utilising enzyme, mobile domain 341 412 4.2E-20 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 Gene3D G3DSA:1.10.274.10 206 330 2.7E-56 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 Gene3D G3DSA:3.50.30.10 189 419 2.7E-56 T 13-10-2018 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 Pfam PF05524 PEP-utilising enzyme, N-terminal 189 310 5.0E-21 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 Gene3D G3DSA:3.30.450.40 8 174 4.1E-49 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 637 652 5.7E-23 T 13-10-2018 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 480 499 5.7E-23 T 13-10-2018 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 654 669 5.7E-23 T 13-10-2018 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 690 702 5.7E-23 T 13-10-2018 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 SUPERFAMILY SSF55781 10 168 6.76E-32 T 13-10-2018 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 SMART SM00065 26 173 1.9E-23 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 187 754 8.8E-131 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 SUPERFAMILY SSF47831 217 325 3.4E-25 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 637 655 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 446 730 3.6E-92 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 Gene3D G3DSA:3.20.20.60 420 764 1.4E-101 T 13-10-2018 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 SUPERFAMILY SSF52009 292 418 1.44E-27 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 SUPERFAMILY SSF51621 445 731 9.68E-95 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ambt_15405 5a3f0b2cb0fb915a4154762df869dd03 772 Pfam PF01590 GAF domain 27 163 2.3E-19 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_09595 a7e679add07723807b780cfa98a8f848 183 SUPERFAMILY SSF55469 1 181 1.44E-35 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ambt_09595 a7e679add07723807b780cfa98a8f848 183 PIRSF PIRSF000232 1 183 7.5E-57 T 13-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like ambt_09595 a7e679add07723807b780cfa98a8f848 183 Pfam PF00881 Nitroreductase family 9 161 2.8E-19 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ambt_09595 a7e679add07723807b780cfa98a8f848 183 Gene3D G3DSA:3.40.109.10 1 182 2.5E-36 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ambt_09060 e0f6d01c8d6c8fb3587e93779c6152c8 417 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 410 3.2E-100 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ambt_09060 e0f6d01c8d6c8fb3587e93779c6152c8 417 Gene3D G3DSA:3.90.1150.10 280 417 9.7E-41 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_09060 e0f6d01c8d6c8fb3587e93779c6152c8 417 Gene3D G3DSA:3.40.640.10 5 276 7.7E-65 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_09060 e0f6d01c8d6c8fb3587e93779c6152c8 417 SUPERFAMILY SSF53383 38 411 2.66E-88 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_09060 e0f6d01c8d6c8fb3587e93779c6152c8 417 PIRSF PIRSF001434 1 413 3.1E-112 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ambt_11945 676422a2897eae57a96a13153d93c3b9 278 SUPERFAMILY SSF53850 63 267 4.71E-45 T 13-10-2018 ambt_11945 676422a2897eae57a96a13153d93c3b9 278 Gene3D G3DSA:1.10.10.10 15 57 1.2E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_11945 676422a2897eae57a96a13153d93c3b9 278 Gene3D G3DSA:3.40.190.290 64 263 3.0E-63 T 13-10-2018 ambt_11945 676422a2897eae57a96a13153d93c3b9 278 Pfam PF03466 LysR substrate binding domain 60 262 4.6E-42 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_20135 5c30879d393831fdcb3bfa1c319c204a 258 SUPERFAMILY SSF49354 32 158 1.83E-7 T 13-10-2018 IPR008962 PapD-like superfamily ambt_20135 5c30879d393831fdcb3bfa1c319c204a 258 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 32 156 5.8E-5 T 13-10-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 SMART SM01116 77 149 3.6E-49 T 13-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 PIRSF PIRSF001263 1 149 7.9E-50 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 SUPERFAMILY SSF55234 82 149 8.89E-30 T 13-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 Gene3D G3DSA:1.10.260.40 2 82 4.1E-29 T 13-10-2018 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 Hamap MF_00535 Cyanate hydratase [cynS]. 1 149 79.486 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 SUPERFAMILY SSF47413 2 79 3.66E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 Gene3D G3DSA:3.30.1160.10 83 149 6.9E-34 T 13-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 PRINTS PR01693 Cyanase signature 134 144 2.8E-27 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 PRINTS PR01693 Cyanase signature 16 31 2.8E-27 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 PRINTS PR01693 Cyanase signature 103 119 2.8E-27 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 PRINTS PR01693 Cyanase signature 36 53 2.8E-27 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 PRINTS PR01693 Cyanase signature 85 99 2.8E-27 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 TIGRFAM TIGR00673 cynS: cyanase 4 149 3.1E-53 T 13-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 ambt_11105 7e907edaf81a62e79c4332b43c6c2eb3 149 Pfam PF02560 Cyanate lyase C-terminal domain 81 147 6.3E-35 T 13-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 ambt_04345 2552e50248a73e0e46b5a95546f164b4 418 Gene3D G3DSA:3.90.1150.10 10 395 1.0E-184 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_04345 2552e50248a73e0e46b5a95546f164b4 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ambt_04345 2552e50248a73e0e46b5a95546f164b4 418 Pfam PF00464 Serine hydroxymethyltransferase 9 387 1.2E-182 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ambt_04345 2552e50248a73e0e46b5a95546f164b4 418 SUPERFAMILY SSF53383 6 417 1.79E-180 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_04345 2552e50248a73e0e46b5a95546f164b4 418 PIRSF PIRSF000412 1 418 7.0E-168 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ambt_04345 2552e50248a73e0e46b5a95546f164b4 418 Gene3D G3DSA:3.40.640.10 37 290 1.0E-184 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_04345 2552e50248a73e0e46b5a95546f164b4 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 418 52.508 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ambt_11965 c9bf0819611b2ecc44d88915dfb7f925 374 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 147 357 7.8E-58 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ambt_11965 c9bf0819611b2ecc44d88915dfb7f925 374 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 371 33.465 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ambt_11965 c9bf0819611b2ecc44d88915dfb7f925 374 SUPERFAMILY SSF55347 137 358 2.09E-78 T 13-10-2018 ambt_11965 c9bf0819611b2ecc44d88915dfb7f925 374 PIRSF PIRSF000148 3 374 3.6E-67 T 13-10-2018 ambt_11965 c9bf0819611b2ecc44d88915dfb7f925 374 Gene3D G3DSA:3.40.50.720 6 360 5.8E-143 T 13-10-2018 ambt_11965 c9bf0819611b2ecc44d88915dfb7f925 374 Gene3D G3DSA:3.30.360.10 138 354 5.8E-143 T 13-10-2018 ambt_11965 c9bf0819611b2ecc44d88915dfb7f925 374 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 123 3.6E-25 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ambt_11965 c9bf0819611b2ecc44d88915dfb7f925 374 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 265 279 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ambt_11965 c9bf0819611b2ecc44d88915dfb7f925 374 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 5 370 4.9E-192 T 13-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ambt_11965 c9bf0819611b2ecc44d88915dfb7f925 374 SUPERFAMILY SSF51735 4 150 1.88E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_11965 c9bf0819611b2ecc44d88915dfb7f925 374 SMART SM00859 5 125 6.7E-28 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ambt_00300 e7dd8f53aeede4f93a33b361c4c5ca84 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 2.5E-84 T 13-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 ambt_00300 e7dd8f53aeede4f93a33b361c4c5ca84 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.149 T 13-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK ambt_00300 e7dd8f53aeede4f93a33b361c4c5ca84 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 4.7E-67 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 ambt_00300 e7dd8f53aeede4f93a33b361c4c5ca84 301 Gene3D G3DSA:3.30.1490.20 115 181 8.7E-27 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ambt_00300 e7dd8f53aeede4f93a33b361c4c5ca84 301 Gene3D G3DSA:3.30.470.80 182 299 3.1E-43 T 13-10-2018 ambt_00300 e7dd8f53aeede4f93a33b361c4c5ca84 301 Gene3D G3DSA:3.40.50.20 1 114 1.1E-39 T 13-10-2018 ambt_00300 e7dd8f53aeede4f93a33b361c4c5ca84 301 SUPERFAMILY SSF56059 98 288 9.72E-50 T 13-10-2018 ambt_02540 df2df0f8bfa3c8588333a22c13ae17b5 55 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 54 21.267 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 ambt_02540 df2df0f8bfa3c8588333a22c13ae17b5 55 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.9E-14 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 ambt_02540 df2df0f8bfa3c8588333a22c13ae17b5 55 PIRSF PIRSF036466 1 55 1.3E-22 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 Gene3D G3DSA:3.40.50.1700 420 657 4.7E-63 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 70 394 2.1E-83 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 Gene3D G3DSA:3.20.20.300 55 418 7.2E-135 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 SUPERFAMILY SSF52279 435 656 1.31E-39 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 SUPERFAMILY SSF51445 54 434 2.11E-108 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 PRINTS PR00133 Glycosyl hydrolase family 3 signature 316 334 4.7E-20 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 PRINTS PR00133 Glycosyl hydrolase family 3 signature 206 222 4.7E-20 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 PRINTS PR00133 Glycosyl hydrolase family 3 signature 160 179 4.7E-20 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 PRINTS PR00133 Glycosyl hydrolase family 3 signature 246 262 4.7E-20 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 PRINTS PR00133 Glycosyl hydrolase family 3 signature 136 152 4.7E-20 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 435 654 2.5E-30 T 13-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ambt_20070 5f3a3c74b18719ccfcc98819edec618b 857 Gene3D G3DSA:2.60.120.430 678 857 1.2E-14 T 13-10-2018 ambt_11080 9fe7ab4ac72f3bb6f240d06e6d4ea91c 303 PIRSF PIRSF002849 1 300 1.2E-114 T 13-10-2018 ambt_11080 9fe7ab4ac72f3bb6f240d06e6d4ea91c 303 Gene3D G3DSA:1.10.8.300 194 299 4.5E-25 T 13-10-2018 ambt_11080 9fe7ab4ac72f3bb6f240d06e6d4ea91c 303 Gene3D G3DSA:3.40.50.300 16 182 5.9E-42 T 13-10-2018 ambt_11080 9fe7ab4ac72f3bb6f240d06e6d4ea91c 303 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 35 165 3.9E-60 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 ambt_11080 9fe7ab4ac72f3bb6f240d06e6d4ea91c 303 SUPERFAMILY SSF52540 10 277 3.43E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_17135 8d22680e5fa0ac5a597b119476669a7e 488 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 425 1.3E-162 T 13-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 ambt_17135 8d22680e5fa0ac5a597b119476669a7e 488 SUPERFAMILY SSF50249 39 127 8.0E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_17135 8d22680e5fa0ac5a597b119476669a7e 488 Gene3D G3DSA:3.40.1260.20 402 487 1.4E-5 T 13-10-2018 ambt_17135 8d22680e5fa0ac5a597b119476669a7e 488 Gene3D G3DSA:2.40.50.140 30 127 8.7E-31 T 13-10-2018 ambt_17135 8d22680e5fa0ac5a597b119476669a7e 488 SMART SM00316 37 122 1.5E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_17135 8d22680e5fa0ac5a597b119476669a7e 488 Pfam PF00575 S1 RNA binding domain 38 109 9.3E-5 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_17135 8d22680e5fa0ac5a597b119476669a7e 488 Pfam PF10150 Ribonuclease E/G family 124 392 1.1E-99 T 13-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 ambt_08125 2b07ed7fdf4f243b934d0a67702ee35d 512 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 5 227 8.2E-84 T 13-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein ambt_08125 2b07ed7fdf4f243b934d0a67702ee35d 512 Gene3D G3DSA:3.40.50.620 6 229 3.5E-124 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_08125 2b07ed7fdf4f243b934d0a67702ee35d 512 SUPERFAMILY SSF48173 229 491 1.96E-61 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 ambt_08125 2b07ed7fdf4f243b934d0a67702ee35d 512 Gene3D G3DSA:1.25.40.80 132 318 3.5E-124 T 13-10-2018 ambt_08125 2b07ed7fdf4f243b934d0a67702ee35d 512 Gene3D G3DSA:1.10.10.1710 443 512 4.2E-25 T 13-10-2018 ambt_08125 2b07ed7fdf4f243b934d0a67702ee35d 512 Gene3D G3DSA:1.10.579.10 322 442 1.3E-53 T 13-10-2018 ambt_03415 6483db2eaba9674284689e7d667facac 334 SUPERFAMILY SSF52540 9 241 5.6E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_03415 6483db2eaba9674284689e7d667facac 334 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 272 1.1E-100 T 13-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis ambt_03415 6483db2eaba9674284689e7d667facac 334 Gene3D G3DSA:1.10.1580.10 175 275 8.0E-23 T 13-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily ambt_03415 6483db2eaba9674284689e7d667facac 334 Gene3D G3DSA:3.40.50.300 3 171 5.5E-41 T 13-10-2018 ambt_03415 6483db2eaba9674284689e7d667facac 334 PIRSF PIRSF006230 1 277 2.1E-98 T 13-10-2018 IPR016478 GTPase, MTG1 ambt_03415 6483db2eaba9674284689e7d667facac 334 PIRSF PIRSF006230 279 334 1400.0 T 13-10-2018 IPR016478 GTPase, MTG1 ambt_03415 6483db2eaba9674284689e7d667facac 334 Pfam PF01926 50S ribosome-binding GTPase 117 175 4.0E-13 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_19665 e06bd391d71309d6c7ee173050259616 182 PRINTS PR00338 Transcription termination factor NUSG signature 158 174 9.9E-20 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ambt_19665 e06bd391d71309d6c7ee173050259616 182 PRINTS PR00338 Transcription termination factor NUSG signature 62 74 9.9E-20 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ambt_19665 e06bd391d71309d6c7ee173050259616 182 PRINTS PR00338 Transcription termination factor NUSG signature 140 155 9.9E-20 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ambt_19665 e06bd391d71309d6c7ee173050259616 182 Gene3D G3DSA:3.30.70.940 2 122 3.7E-45 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ambt_19665 e06bd391d71309d6c7ee173050259616 182 SUPERFAMILY SSF50104 126 181 9.03E-19 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily ambt_19665 e06bd391d71309d6c7ee173050259616 182 Pfam PF02357 Transcription termination factor nusG 8 113 5.7E-25 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ambt_19665 e06bd391d71309d6c7ee173050259616 182 Pfam PF00467 KOW motif 131 161 1.9E-9 T 13-10-2018 IPR005824 KOW ambt_19665 e06bd391d71309d6c7ee173050259616 182 SMART SM00738 7 116 4.4E-46 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ambt_19665 e06bd391d71309d6c7ee173050259616 182 SMART SM00739 128 155 2.4E-7 T 13-10-2018 IPR005824 KOW ambt_19665 e06bd391d71309d6c7ee173050259616 182 Gene3D G3DSA:2.30.30.30 123 181 1.6E-25 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 ambt_19665 e06bd391d71309d6c7ee173050259616 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 165 174 - T 13-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site ambt_19665 e06bd391d71309d6c7ee173050259616 182 SUPERFAMILY SSF82679 7 118 1.96E-37 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ambt_19665 e06bd391d71309d6c7ee173050259616 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 10 181 2.8E-67 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ambt_19665 e06bd391d71309d6c7ee173050259616 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 7 182 24.095 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ambt_02995 52286913ed0328cb6120992b4f778fbb 257 Gene3D G3DSA:3.40.50.720 3 256 3.6E-63 T 13-10-2018 ambt_02995 52286913ed0328cb6120992b4f778fbb 257 SUPERFAMILY SSF51735 6 254 4.08E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_02995 52286913ed0328cb6120992b4f778fbb 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.5E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02995 52286913ed0328cb6120992b4f778fbb 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.5E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02995 52286913ed0328cb6120992b4f778fbb 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.5E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02995 52286913ed0328cb6120992b4f778fbb 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.5E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02995 52286913ed0328cb6120992b4f778fbb 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.5E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02995 52286913ed0328cb6120992b4f778fbb 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 3.5E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02995 52286913ed0328cb6120992b4f778fbb 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.5E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02995 52286913ed0328cb6120992b4f778fbb 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02995 52286913ed0328cb6120992b4f778fbb 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.5E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02995 52286913ed0328cb6120992b4f778fbb 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 5.2E-47 T 13-10-2018 ambt_02280 d146000f206ac6a9c1e87a46a758cedf 402 Gene3D G3DSA:1.20.81.30 56 170 5.8E-28 T 13-10-2018 ambt_02280 d146000f206ac6a9c1e87a46a758cedf 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 64 76 4.4E-18 T 13-10-2018 IPR003004 GspF/PilC family ambt_02280 d146000f206ac6a9c1e87a46a758cedf 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 4.4E-18 T 13-10-2018 IPR003004 GspF/PilC family ambt_02280 d146000f206ac6a9c1e87a46a758cedf 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 4.4E-18 T 13-10-2018 IPR003004 GspF/PilC family ambt_02280 d146000f206ac6a9c1e87a46a758cedf 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 4.4E-18 T 13-10-2018 IPR003004 GspF/PilC family ambt_02280 d146000f206ac6a9c1e87a46a758cedf 402 Pfam PF00482 Type II secretion system (T2SS), protein F 272 394 2.8E-29 T 13-10-2018 IPR018076 Type II secretion system F domain ambt_02280 d146000f206ac6a9c1e87a46a758cedf 402 Pfam PF00482 Type II secretion system (T2SS), protein F 68 191 3.9E-30 T 13-10-2018 IPR018076 Type II secretion system F domain ambt_02280 d146000f206ac6a9c1e87a46a758cedf 402 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 163 191 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 ambt_02280 d146000f206ac6a9c1e87a46a758cedf 402 Gene3D G3DSA:1.20.81.30 255 364 1.2E-28 T 13-10-2018 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 51.696 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 PIRSF PIRSF000770 5 284 4.1E-32 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 9.6E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 PRINTS PR00046 Major sigma-70 factor signature 79 92 9.6E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 PRINTS PR00046 Major sigma-70 factor signature 233 245 9.6E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 9.6E-18 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 79 92 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 Gene3D G3DSA:1.20.140.160 131 283 7.2E-15 T 13-10-2018 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 Pfam PF04542 Sigma-70 region 2 55 124 1.4E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 Gene3D G3DSA:1.10.601.10 6 124 2.1E-29 T 13-10-2018 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 16 283 3.0E-125 T 13-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 281 8.4E-33 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 SUPERFAMILY SSF88659 195 282 2.62E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 Pfam PF04545 Sigma-70, region 4 229 279 7.9E-14 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 SUPERFAMILY SSF88946 14 124 3.92E-40 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_19420 7980eaa51f963960aa4f9b25b219cd61 284 Pfam PF00140 Sigma-70 factor, region 1.2 21 47 3.4E-5 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_03515 7fa1123aace9f28d3e14aa805a63a539 308 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 308 9.0E-104 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 ambt_03515 7fa1123aace9f28d3e14aa805a63a539 308 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 7 308 42.726 T 13-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 ambt_03515 7fa1123aace9f28d3e14aa805a63a539 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 298 3.6E-69 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ambt_03515 7fa1123aace9f28d3e14aa805a63a539 308 PIRSF PIRSF026649 5 306 5.6E-78 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 SMART SM00052 695 942 1.5E-64 T 13-10-2018 IPR001633 EAL domain ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 SUPERFAMILY SSF55073 529 685 1.1E-41 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 Gene3D G3DSA:3.20.20.450 684 944 4.9E-71 T 13-10-2018 IPR035919 EAL domain superfamily ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 Pfam PF13426 PAS domain 415 512 4.6E-8 T 13-10-2018 IPR000014 PAS domain ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 SMART SM00267 513 683 5.2E-46 T 13-10-2018 IPR000160 GGDEF domain ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 520 681 7.2E-36 T 13-10-2018 IPR000160 GGDEF domain ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 Gene3D G3DSA:3.30.70.270 513 683 3.2E-48 T 13-10-2018 ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 Pfam PF07696 7TMR-DISM extracellular 2 71 171 5.3E-5 T 13-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 Pfam PF00990 Diguanylate cyclase, GGDEF domain 524 679 4.8E-35 T 13-10-2018 IPR000160 GGDEF domain ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 Pfam PF00563 EAL domain 701 937 9.6E-59 T 13-10-2018 IPR001633 EAL domain ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 SUPERFAMILY SSF141868 701 944 1.96E-65 T 13-10-2018 IPR035919 EAL domain superfamily ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 Gene3D G3DSA:3.30.450.20 399 511 3.0E-14 T 13-10-2018 ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 398 517 3.0E-10 T 13-10-2018 IPR000014 PAS domain ambt_18140 8f7ffeefd211b3c1ecdd7281c940f745 946 SUPERFAMILY SSF55785 411 521 3.84E-12 T 13-10-2018 IPR035965 PAS domain superfamily ambt_14820 4d02dc68a52f91d40e8dfa54c03d99e7 454 SUPERFAMILY SSF55021 381 453 2.44E-13 T 13-10-2018 ambt_14820 4d02dc68a52f91d40e8dfa54c03d99e7 454 Gene3D G3DSA:3.40.1160.10 7 296 6.3E-96 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_14820 4d02dc68a52f91d40e8dfa54c03d99e7 454 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 4 454 3.7E-126 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ambt_14820 4d02dc68a52f91d40e8dfa54c03d99e7 454 Pfam PF00696 Amino acid kinase family 5 284 3.7E-49 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ambt_14820 4d02dc68a52f91d40e8dfa54c03d99e7 454 SUPERFAMILY SSF53633 6 299 1.09E-71 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_14820 4d02dc68a52f91d40e8dfa54c03d99e7 454 Gene3D G3DSA:3.30.70.260 310 452 9.1E-44 T 13-10-2018 ambt_14820 4d02dc68a52f91d40e8dfa54c03d99e7 454 SUPERFAMILY SSF55021 302 368 6.41E-13 T 13-10-2018 ambt_14820 4d02dc68a52f91d40e8dfa54c03d99e7 454 PIRSF PIRSF000726 3 454 1.9E-125 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ambt_14820 4d02dc68a52f91d40e8dfa54c03d99e7 454 Gene3D G3DSA:1.20.120.1320 43 136 6.3E-96 T 13-10-2018 ambt_14820 4d02dc68a52f91d40e8dfa54c03d99e7 454 Gene3D G3DSA:3.30.70.260 316 388 9.1E-44 T 13-10-2018 ambt_14820 4d02dc68a52f91d40e8dfa54c03d99e7 454 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ambt_16125 02388f99fff27ecc48a8b387e055fd33 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 3.1E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_16125 02388f99fff27ecc48a8b387e055fd33 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 3.1E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_16125 02388f99fff27ecc48a8b387e055fd33 196 SUPERFAMILY SSF48498 77 168 1.08E-14 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ambt_16125 02388f99fff27ecc48a8b387e055fd33 196 SUPERFAMILY SSF46689 3 67 2.1E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_16125 02388f99fff27ecc48a8b387e055fd33 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 4.1E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_16125 02388f99fff27ecc48a8b387e055fd33 196 Gene3D G3DSA:1.10.357.10 1 187 1.5E-34 T 13-10-2018 ambt_16125 02388f99fff27ecc48a8b387e055fd33 196 Pfam PF13305 WHG domain 85 159 5.3E-9 T 13-10-2018 IPR025996 WHG domain ambt_00330 cbb985144454c1af682829ae34c35e21 227 SUPERFAMILY SSF53098 22 198 3.29E-26 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_00330 cbb985144454c1af682829ae34c35e21 227 SMART SM00479 29 202 2.5E-8 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_00330 cbb985144454c1af682829ae34c35e21 227 Gene3D G3DSA:3.30.420.10 22 200 1.3E-27 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_00330 cbb985144454c1af682829ae34c35e21 227 Pfam PF00929 Exonuclease 33 190 7.0E-14 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_20660 6e3619638f8fcc634251fd0afd8cb8f5 275 Pfam PF00005 ABC transporter 46 201 9.2E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_20660 6e3619638f8fcc634251fd0afd8cb8f5 275 Gene3D G3DSA:3.40.50.300 27 271 1.0E-52 T 13-10-2018 ambt_20660 6e3619638f8fcc634251fd0afd8cb8f5 275 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 30 271 3.1E-114 T 13-10-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD ambt_20660 6e3619638f8fcc634251fd0afd8cb8f5 275 SUPERFAMILY SSF52540 30 272 4.33E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20660 6e3619638f8fcc634251fd0afd8cb8f5 275 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 249 270 3.8E-8 T 13-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ambt_02410 d5afe856ed6c89d13c4d513c5d3c0bfb 298 Gene3D G3DSA:3.40.1190.20 1 298 1.7E-79 T 13-10-2018 IPR029056 Ribokinase-like ambt_02410 d5afe856ed6c89d13c4d513c5d3c0bfb 298 SUPERFAMILY SSF53613 1 293 4.37E-66 T 13-10-2018 IPR029056 Ribokinase-like ambt_02410 d5afe856ed6c89d13c4d513c5d3c0bfb 298 Pfam PF00294 pfkB family carbohydrate kinase 6 285 2.6E-45 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB ambt_02410 d5afe856ed6c89d13c4d513c5d3c0bfb 298 Hamap MF_01987 Ribokinase [rbsK]. 1 292 20.631 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 ambt_02410 d5afe856ed6c89d13c4d513c5d3c0bfb 298 PRINTS PR00990 Ribokinase signature 32 51 1.2E-26 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ambt_02410 d5afe856ed6c89d13c4d513c5d3c0bfb 298 PRINTS PR00990 Ribokinase signature 168 183 1.2E-26 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ambt_02410 d5afe856ed6c89d13c4d513c5d3c0bfb 298 PRINTS PR00990 Ribokinase signature 101 114 1.2E-26 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ambt_02410 d5afe856ed6c89d13c4d513c5d3c0bfb 298 PRINTS PR00990 Ribokinase signature 5 26 1.2E-26 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ambt_02410 d5afe856ed6c89d13c4d513c5d3c0bfb 298 PRINTS PR00990 Ribokinase signature 208 219 1.2E-26 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ambt_04040 5cf7e003ac2c0b436b9ee48e91ba2c3d 240 Pfam PF01980 Uncharacterised protein family UPF0066 23 144 5.5E-37 T 13-10-2018 IPR023370 YaeB-like, N-terminal domain ambt_04040 5cf7e003ac2c0b436b9ee48e91ba2c3d 240 SUPERFAMILY SSF118196 6 235 1.11E-68 T 13-10-2018 IPR036413 YaeB-like superfamily ambt_04040 5cf7e003ac2c0b436b9ee48e91ba2c3d 240 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 5 149 1.8E-40 T 13-10-2018 IPR023370 YaeB-like, N-terminal domain ambt_04040 5cf7e003ac2c0b436b9ee48e91ba2c3d 240 ProSitePatterns PS01318 TsaA-like domain signature. 88 99 - T 13-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site ambt_04040 5cf7e003ac2c0b436b9ee48e91ba2c3d 240 Gene3D G3DSA:3.30.2310.10 157 236 9.3E-13 T 13-10-2018 ambt_04040 5cf7e003ac2c0b436b9ee48e91ba2c3d 240 Gene3D G3DSA:2.40.30.70 8 156 4.2E-45 T 13-10-2018 IPR036414 YaeB, N-terminal domain superfamily ambt_01960 00a3cdc2a4fd5e4cbbc06277b54d6344 428 Pfam PF14821 Threonine synthase N terminus 8 78 1.5E-10 T 13-10-2018 IPR029144 Threonine synthase, N-terminal ambt_01960 00a3cdc2a4fd5e4cbbc06277b54d6344 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ambt_01960 00a3cdc2a4fd5e4cbbc06277b54d6344 428 Gene3D G3DSA:3.40.50.1100 83 392 2.4E-133 T 13-10-2018 ambt_01960 00a3cdc2a4fd5e4cbbc06277b54d6344 428 TIGRFAM TIGR00260 thrC: threonine synthase 64 390 3.7E-108 T 13-10-2018 IPR004450 Threonine synthase-like ambt_01960 00a3cdc2a4fd5e4cbbc06277b54d6344 428 Gene3D G3DSA:3.40.50.1100 101 399 2.4E-133 T 13-10-2018 ambt_01960 00a3cdc2a4fd5e4cbbc06277b54d6344 428 Gene3D G3DSA:3.90.1380.10 1 79 3.1E-23 T 13-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily ambt_01960 00a3cdc2a4fd5e4cbbc06277b54d6344 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 89 367 1.0E-24 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ambt_01960 00a3cdc2a4fd5e4cbbc06277b54d6344 428 SUPERFAMILY SSF53686 4 426 6.29E-124 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ambt_09300 1437573991bc3fe9cd02a9708f8263e4 137 Gene3D G3DSA:1.10.760.10 9 137 3.5E-19 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_09300 1437573991bc3fe9cd02a9708f8263e4 137 SUPERFAMILY SSF46626 27 135 6.72E-15 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_09300 1437573991bc3fe9cd02a9708f8263e4 137 Pfam PF00034 Cytochrome c 50 134 1.1E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_10695 7ffcb1a5f701ffbd1f0cb26807824e1e 186 SUPERFAMILY SSF54364 19 92 5.49E-29 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ambt_10695 7ffcb1a5f701ffbd1f0cb26807824e1e 186 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 97 182 2.5E-37 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 ambt_10695 7ffcb1a5f701ffbd1f0cb26807824e1e 186 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 11 185 30.528 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ambt_10695 7ffcb1a5f701ffbd1f0cb26807824e1e 186 Gene3D G3DSA:3.10.20.80 16 89 1.2E-31 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ambt_10695 7ffcb1a5f701ffbd1f0cb26807824e1e 186 SUPERFAMILY SSF55200 97 185 6.54E-35 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 ambt_10695 7ffcb1a5f701ffbd1f0cb26807824e1e 186 ProSitePatterns PS00938 Initiation factor 3 signature. 72 85 - T 13-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 ambt_10695 7ffcb1a5f701ffbd1f0cb26807824e1e 186 Gene3D G3DSA:3.30.110.10 90 186 1.4E-39 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 ambt_10695 7ffcb1a5f701ffbd1f0cb26807824e1e 186 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 21 90 1.9E-30 T 13-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ambt_10695 7ffcb1a5f701ffbd1f0cb26807824e1e 186 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 21 185 2.0E-72 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ambt_16635 0b779e9279723d1111f24c68354c84b8 335 SUPERFAMILY SSF47413 1 59 1.31E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_16635 0b779e9279723d1111f24c68354c84b8 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.1E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_16635 0b779e9279723d1111f24c68354c84b8 335 SMART SM00354 1 71 4.7E-24 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_16635 0b779e9279723d1111f24c68354c84b8 335 Pfam PF13377 Periplasmic binding protein-like domain 168 329 6.4E-45 T 13-10-2018 ambt_16635 0b779e9279723d1111f24c68354c84b8 335 Gene3D G3DSA:3.40.50.2300 64 308 1.1E-79 T 13-10-2018 ambt_16635 0b779e9279723d1111f24c68354c84b8 335 Gene3D G3DSA:1.10.260.40 1 58 1.0E-19 T 13-10-2018 ambt_16635 0b779e9279723d1111f24c68354c84b8 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 ambt_16635 0b779e9279723d1111f24c68354c84b8 335 Gene3D G3DSA:3.40.50.2300 160 289 1.1E-79 T 13-10-2018 ambt_16635 0b779e9279723d1111f24c68354c84b8 335 SUPERFAMILY SSF53822 63 331 2.36E-81 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_03615 0e9f4b10a7bb40029a4902922ca9014e 651 Pfam PF01757 Acyltransferase family 10 331 1.1E-29 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ambt_20040 91f71797f66e6976fbc11fa1d298a3de 272 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_20040 91f71797f66e6976fbc11fa1d298a3de 272 SUPERFAMILY SSF52540 11 247 3.59E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20040 91f71797f66e6976fbc11fa1d298a3de 272 Gene3D G3DSA:3.40.50.300 7 271 3.3E-54 T 13-10-2018 ambt_20040 91f71797f66e6976fbc11fa1d298a3de 272 SMART SM00382 40 235 2.6E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_20040 91f71797f66e6976fbc11fa1d298a3de 272 Pfam PF00005 ABC transporter 32 186 2.6E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_19055 c34f7139daf0823d260aea76578b3260 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 5.4E-55 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19055 c34f7139daf0823d260aea76578b3260 130 SUPERFAMILY SSF53137 18 130 3.6E-47 T 13-10-2018 ambt_19055 c34f7139daf0823d260aea76578b3260 130 Pfam PF00411 Ribosomal protein S11 20 129 1.2E-50 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ambt_19055 c34f7139daf0823d260aea76578b3260 130 Gene3D G3DSA:3.30.420.80 1 130 4.6E-56 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 ambt_19055 c34f7139daf0823d260aea76578b3260 130 PIRSF PIRSF002131 1 130 4.8E-53 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ambt_19055 c34f7139daf0823d260aea76578b3260 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.758 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ambt_19055 c34f7139daf0823d260aea76578b3260 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site ambt_02885 73ec815782dd4531b08b381ccae13c3d 186 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 22.957 T 13-10-2018 IPR022929 Putative manganese efflux pump MntP ambt_02885 73ec815782dd4531b08b381ccae13c3d 186 Pfam PF02659 Putative manganese efflux pump 32 180 2.7E-46 T 13-10-2018 IPR003810 Putative manganese efflux pump ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 PRINTS PR00481 Cytosol aminopeptidase signature 385 406 1.9E-46 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 PRINTS PR00481 Cytosol aminopeptidase signature 407 427 1.9E-46 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 PRINTS PR00481 Cytosol aminopeptidase signature 348 369 1.9E-46 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 PRINTS PR00481 Cytosol aminopeptidase signature 326 343 1.9E-46 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 PRINTS PR00481 Cytosol aminopeptidase signature 435 450 1.9E-46 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 SUPERFAMILY SSF53187 236 558 1.61E-106 T 13-10-2018 ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 Gene3D G3DSA:3.40.220.10 7 180 4.7E-8 T 13-10-2018 ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 242 551 4.3E-107 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 411 418 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 Gene3D G3DSA:3.40.630.10 237 559 1.7E-119 T 13-10-2018 ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 36 134 4.3E-6 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ambt_01170 86bdc36f838ea30cbb76ffda0677f4cc 564 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 4 559 30.912 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 ambt_20990 229207f7e3dc85cf6659961f9b9de5d7 614 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 5 176 7.5E-17 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ambt_20990 229207f7e3dc85cf6659961f9b9de5d7 614 Gene3D G3DSA:1.10.10.2830 90 195 8.4E-18 T 13-10-2018 ambt_20990 229207f7e3dc85cf6659961f9b9de5d7 614 Pfam PF02195 ParB-like nuclease domain 4 99 6.0E-11 T 13-10-2018 IPR003115 ParB/Sulfiredoxin ambt_20990 229207f7e3dc85cf6659961f9b9de5d7 614 SMART SM00470 3 100 5.3E-7 T 13-10-2018 IPR003115 ParB/Sulfiredoxin ambt_20990 229207f7e3dc85cf6659961f9b9de5d7 614 SUPERFAMILY SSF109709 92 194 2.88E-21 T 13-10-2018 ambt_20990 229207f7e3dc85cf6659961f9b9de5d7 614 Gene3D G3DSA:3.90.1530.30 18 89 7.6E-9 T 13-10-2018 ambt_20990 229207f7e3dc85cf6659961f9b9de5d7 614 SUPERFAMILY SSF110849 3 102 1.31E-12 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily ambt_21875 398552fec991073c780d205c2adc607d 448 SUPERFAMILY SSF56112 105 319 2.81E-10 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_21875 398552fec991073c780d205c2adc607d 448 Pfam PF03109 ABC1 family 121 228 7.2E-22 T 13-10-2018 IPR004147 UbiB domain ambt_04635 cc55bbf5ad8e19d0724a2cc40404adad 149 Pfam PF00583 Acetyltransferase (GNAT) family 42 131 1.3E-10 T 13-10-2018 IPR000182 GNAT domain ambt_04635 cc55bbf5ad8e19d0724a2cc40404adad 149 SUPERFAMILY SSF55729 1 142 1.13E-22 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_04635 cc55bbf5ad8e19d0724a2cc40404adad 149 Gene3D G3DSA:3.40.630.30 1 149 2.0E-20 T 13-10-2018 ambt_14685 0d879ff5a1dd981a258fdcb1fed642ed 506 SUPERFAMILY SSF55031 239 343 3.93E-21 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ambt_14685 0d879ff5a1dd981a258fdcb1fed642ed 506 Pfam PF01546 Peptidase family M20/M25/M40 126 334 4.6E-10 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 ambt_14685 0d879ff5a1dd981a258fdcb1fed642ed 506 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 59 436 3.0E-65 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 ambt_14685 0d879ff5a1dd981a258fdcb1fed642ed 506 Pfam PF07687 Peptidase dimerisation domain 237 328 2.8E-9 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain ambt_14685 0d879ff5a1dd981a258fdcb1fed642ed 506 SUPERFAMILY SSF53187 53 471 1.15E-48 T 13-10-2018 ambt_14685 0d879ff5a1dd981a258fdcb1fed642ed 506 PIRSF PIRSF037227 41 506 7.9E-144 T 13-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B ambt_01525 84e0ffe6b6669b26b8f8fadb9de95e65 537 Gene3D G3DSA:1.10.3080.10 1 404 1.2E-77 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 ambt_01525 84e0ffe6b6669b26b8f8fadb9de95e65 537 Pfam PF00654 Voltage gated chloride channel 51 386 3.1E-68 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ambt_01525 84e0ffe6b6669b26b8f8fadb9de95e65 537 SUPERFAMILY SSF81340 2 407 5.75E-80 T 13-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 ambt_01525 84e0ffe6b6669b26b8f8fadb9de95e65 537 PRINTS PR00762 Chloride channel signature 337 353 8.6E-14 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ambt_01525 84e0ffe6b6669b26b8f8fadb9de95e65 537 PRINTS PR00762 Chloride channel signature 142 161 8.6E-14 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ambt_01525 84e0ffe6b6669b26b8f8fadb9de95e65 537 PRINTS PR00762 Chloride channel signature 91 110 8.6E-14 T 13-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 Gene3D G3DSA:3.40.50.300 118 300 4.8E-61 T 13-10-2018 ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 SUPERFAMILY SSF52540 129 367 8.36E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 SUPERFAMILY SSF55785 6 113 4.19E-5 T 13-10-2018 IPR035965 PAS domain superfamily ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 Pfam PF02954 Bacterial regulatory protein, Fis family 382 421 2.0E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 SUPERFAMILY SSF46689 338 425 6.27E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 Gene3D G3DSA:1.10.8.60 301 371 7.0E-19 T 13-10-2018 ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 SMART SM00382 149 292 9.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 153 166 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 Gene3D G3DSA:1.10.10.60 379 429 5.8E-10 T 13-10-2018 ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 337 346 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 Pfam PF00158 Sigma-54 interaction domain 129 295 1.1E-63 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ambt_20200 9ef20a0afcfe6e7f673c797905f30a7a 429 Pfam PF08448 PAS fold 11 114 6.0E-6 T 13-10-2018 IPR013656 PAS fold-4 ambt_12800 e14ecd8438857bb11c70589f4d4584c5 193 Pfam PF03358 NADPH-dependent FMN reductase 2 154 8.0E-38 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ambt_12800 e14ecd8438857bb11c70589f4d4584c5 193 Gene3D G3DSA:3.40.50.360 1 192 1.0E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_12800 e14ecd8438857bb11c70589f4d4584c5 193 SUPERFAMILY SSF52218 3 180 2.73E-45 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_05510 8349e73aee238455c606e031060ceebd 355 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 130 144 - T 13-10-2018 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 ambt_05510 8349e73aee238455c606e031060ceebd 355 SUPERFAMILY SSF56281 121 353 1.49E-19 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_05510 8349e73aee238455c606e031060ceebd 355 Pfam PF02112 cAMP phosphodiesterases class-II 52 350 3.0E-49 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 ambt_05510 8349e73aee238455c606e031060ceebd 355 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 126 144 4.6E-23 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 ambt_05510 8349e73aee238455c606e031060ceebd 355 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 261 272 4.6E-23 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 ambt_05510 8349e73aee238455c606e031060ceebd 355 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 280 293 4.6E-23 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 ambt_05510 8349e73aee238455c606e031060ceebd 355 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 153 174 4.6E-23 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 ambt_05510 8349e73aee238455c606e031060ceebd 355 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 306 317 4.6E-23 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 ambt_05510 8349e73aee238455c606e031060ceebd 355 PIRSF PIRSF000962 13 355 1.8E-86 T 13-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 ambt_05510 8349e73aee238455c606e031060ceebd 355 Gene3D G3DSA:3.60.15.10 53 354 5.0E-18 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_10830 c73da13297fd019dd82a20cb55f013d3 219 SUPERFAMILY SSF48498 83 205 3.56E-34 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ambt_10830 c73da13297fd019dd82a20cb55f013d3 219 Gene3D G3DSA:1.10.10.60 14 65 1.6E-18 T 13-10-2018 ambt_10830 c73da13297fd019dd82a20cb55f013d3 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 4.3E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_10830 c73da13297fd019dd82a20cb55f013d3 219 SUPERFAMILY SSF46689 13 86 7.18E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_10830 c73da13297fd019dd82a20cb55f013d3 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 4.0E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_10830 c73da13297fd019dd82a20cb55f013d3 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 4.0E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_10830 c73da13297fd019dd82a20cb55f013d3 219 Gene3D G3DSA:1.10.357.10 66 206 4.4E-43 T 13-10-2018 ambt_10830 c73da13297fd019dd82a20cb55f013d3 219 Pfam PF08362 YcdC-like protein, C-terminal region 66 206 1.1E-46 T 13-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 ambt_15020 c362bc62e6032ffad175466d0b3663c1 539 SMART SM00304 208 262 1.2E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_15020 c362bc62e6032ffad175466d0b3663c1 539 Gene3D G3DSA:1.10.287.950 208 539 5.5E-71 T 13-10-2018 ambt_15020 c362bc62e6032ffad175466d0b3663c1 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 7.2E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_15020 c362bc62e6032ffad175466d0b3663c1 539 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 305 334 7.2E-7 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_15020 c362bc62e6032ffad175466d0b3663c1 539 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 504 7.4E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_15020 c362bc62e6032ffad175466d0b3663c1 539 SUPERFAMILY SSF58104 230 539 1.96E-79 T 13-10-2018 ambt_15020 c362bc62e6032ffad175466d0b3663c1 539 SMART SM00283 277 538 2.0E-77 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_08695 bfe6c1518ddd081044b5afebff12ac5f 312 SUPERFAMILY SSF56672 26 296 4.23E-8 T 13-10-2018 ambt_08695 bfe6c1518ddd081044b5afebff12ac5f 312 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 34 238 6.6E-22 T 13-10-2018 IPR000477 Reverse transcriptase domain ambt_08695 bfe6c1518ddd081044b5afebff12ac5f 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 91 109 3.0E-25 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 ambt_08695 bfe6c1518ddd081044b5afebff12ac5f 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 179 190 3.0E-25 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 ambt_08695 bfe6c1518ddd081044b5afebff12ac5f 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 44 56 3.0E-25 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 ambt_08695 bfe6c1518ddd081044b5afebff12ac5f 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 75 89 3.0E-25 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 ambt_08695 bfe6c1518ddd081044b5afebff12ac5f 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 234 240 3.0E-25 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 ambt_08695 bfe6c1518ddd081044b5afebff12ac5f 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 29 42 3.0E-25 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 ambt_08695 bfe6c1518ddd081044b5afebff12ac5f 312 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 146 159 3.0E-25 T 13-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 ambt_18175 2ebeac3f5d0c2a8d5a22a9895bb5ad6c 613 Gene3D G3DSA:3.40.1080.20 285 433 6.4E-62 T 13-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily ambt_18175 2ebeac3f5d0c2a8d5a22a9895bb5ad6c 613 Pfam PF13302 Acetyltransferase (GNAT) domain 456 593 2.9E-7 T 13-10-2018 IPR000182 GNAT domain ambt_18175 2ebeac3f5d0c2a8d5a22a9895bb5ad6c 613 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 15 183 1.2E-17 T 13-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 ambt_18175 2ebeac3f5d0c2a8d5a22a9895bb5ad6c 613 Gene3D G3DSA:3.40.630.30 450 611 1.2E-26 T 13-10-2018 ambt_18175 2ebeac3f5d0c2a8d5a22a9895bb5ad6c 613 SUPERFAMILY SSF55729 402 594 2.48E-17 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_18175 2ebeac3f5d0c2a8d5a22a9895bb5ad6c 613 SUPERFAMILY SSF100950 184 434 1.42E-66 T 13-10-2018 IPR037171 NagB/RpiA transferase-like ambt_18175 2ebeac3f5d0c2a8d5a22a9895bb5ad6c 613 Gene3D G3DSA:3.30.750.70 181 284 1.4E-40 T 13-10-2018 ambt_18175 2ebeac3f5d0c2a8d5a22a9895bb5ad6c 613 Gene3D G3DSA:3.40.1080.10 7 179 1.4E-56 T 13-10-2018 ambt_18175 2ebeac3f5d0c2a8d5a22a9895bb5ad6c 613 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 267 419 2.4E-65 T 13-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain ambt_18175 2ebeac3f5d0c2a8d5a22a9895bb5ad6c 613 SUPERFAMILY SSF100950 13 217 5.68E-35 T 13-10-2018 IPR037171 NagB/RpiA transferase-like ambt_06925 72ac0a323755d035ec5c40214f4c657d 391 Pfam PF08281 Sigma-70, region 4 124 175 9.8E-13 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_06925 72ac0a323755d035ec5c40214f4c657d 391 SUPERFAMILY SSF88946 8 93 3.22E-18 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_06925 72ac0a323755d035ec5c40214f4c657d 391 Gene3D G3DSA:1.10.10.10 116 180 8.1E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_06925 72ac0a323755d035ec5c40214f4c657d 391 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 177 3.4E-24 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_06925 72ac0a323755d035ec5c40214f4c657d 391 Gene3D G3DSA:1.10.1740.10 6 113 7.5E-18 T 13-10-2018 ambt_06925 72ac0a323755d035ec5c40214f4c657d 391 SUPERFAMILY SSF88659 115 177 5.61E-11 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_06925 72ac0a323755d035ec5c40214f4c657d 391 Pfam PF04542 Sigma-70 region 2 23 88 1.2E-7 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_12705 b7800a3bfbbb8d28f5bef5acec9f90c4 244 SUPERFAMILY SSF52540 1 221 2.0E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12705 b7800a3bfbbb8d28f5bef5acec9f90c4 244 Gene3D G3DSA:3.40.50.300 1 237 7.7E-67 T 13-10-2018 ambt_12705 b7800a3bfbbb8d28f5bef5acec9f90c4 244 SMART SM00382 30 217 1.3E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_12705 b7800a3bfbbb8d28f5bef5acec9f90c4 244 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_12705 b7800a3bfbbb8d28f5bef5acec9f90c4 244 Pfam PF00005 ABC transporter 21 169 1.5E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_07150 e9c7aa0aef80c995165dca9b7942db1c 135 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 8 132 1.5E-45 T 13-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 ambt_07150 e9c7aa0aef80c995165dca9b7942db1c 135 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 105 1.5E-16 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ambt_07150 e9c7aa0aef80c995165dca9b7942db1c 135 SUPERFAMILY SSF53927 6 133 2.3E-44 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ambt_07150 e9c7aa0aef80c995165dca9b7942db1c 135 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 96 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ambt_07150 e9c7aa0aef80c995165dca9b7942db1c 135 Gene3D G3DSA:3.40.140.10 1 135 2.2E-51 T 13-10-2018 ambt_16765 4fe74cfcc498082deafb7c52a0e055fd 229 Pfam PF00072 Response regulator receiver domain 6 114 6.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_16765 4fe74cfcc498082deafb7c52a0e055fd 229 Gene3D G3DSA:1.10.10.10 128 229 2.6E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_16765 4fe74cfcc498082deafb7c52a0e055fd 229 Gene3D G3DSA:3.40.50.2300 1 124 2.8E-33 T 13-10-2018 ambt_16765 4fe74cfcc498082deafb7c52a0e055fd 229 SUPERFAMILY SSF52172 1 182 1.17E-35 T 13-10-2018 IPR011006 CheY-like superfamily ambt_16765 4fe74cfcc498082deafb7c52a0e055fd 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 6.0E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_16765 4fe74cfcc498082deafb7c52a0e055fd 229 SMART SM00862 152 228 5.7E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_16765 4fe74cfcc498082deafb7c52a0e055fd 229 SMART SM00448 4 114 3.9E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_13530 6d14f1eee680a37e85f3fcbbf783289c 110 SUPERFAMILY SSF101498 16 102 2.48E-16 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily ambt_13530 6d14f1eee680a37e85f3fcbbf783289c 110 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 102 1.9E-19 T 13-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 ambt_13530 6d14f1eee680a37e85f3fcbbf783289c 110 Pfam PF04316 Anti-sigma-28 factor, FlgM 48 100 2.8E-15 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal ambt_00320 118dab108ae34b1d61bc709fad63035a 568 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 8 559 1.8E-262 T 13-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily ambt_00320 118dab108ae34b1d61bc709fad63035a 568 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 472 492 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site ambt_00320 118dab108ae34b1d61bc709fad63035a 568 Gene3D G3DSA:1.20.1730.10 9 336 4.0E-40 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily ambt_00320 118dab108ae34b1d61bc709fad63035a 568 Gene3D G3DSA:1.20.1730.10 348 558 2.2E-26 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily ambt_00320 118dab108ae34b1d61bc709fad63035a 568 Pfam PF00474 Sodium:solute symporter family 375 490 2.7E-15 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_00320 118dab108ae34b1d61bc709fad63035a 568 Pfam PF00474 Sodium:solute symporter family 33 303 2.0E-36 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_18830 5ed7d2472b7f556555927f3c555d55dd 241 Gene3D G3DSA:3.40.50.300 84 216 3.8E-5 T 13-10-2018 ambt_18830 5ed7d2472b7f556555927f3c555d55dd 241 SUPERFAMILY SSF52540 83 206 5.31E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_03100 c09fe8fef11a4c92e892693c647e4b02 399 SUPERFAMILY SSF55073 239 391 4.0E-44 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_03100 c09fe8fef11a4c92e892693c647e4b02 399 Gene3D G3DSA:1.25.40.10 2 144 1.5E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03100 c09fe8fef11a4c92e892693c647e4b02 399 SMART SM00267 223 390 1.1E-57 T 13-10-2018 IPR000160 GGDEF domain ambt_03100 c09fe8fef11a4c92e892693c647e4b02 399 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 231 388 5.2E-49 T 13-10-2018 IPR000160 GGDEF domain ambt_03100 c09fe8fef11a4c92e892693c647e4b02 399 Gene3D G3DSA:3.30.70.270 222 391 7.1E-53 T 13-10-2018 ambt_03100 c09fe8fef11a4c92e892693c647e4b02 399 SUPERFAMILY SSF48452 3 151 2.28E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03100 c09fe8fef11a4c92e892693c647e4b02 399 Pfam PF00990 Diguanylate cyclase, GGDEF domain 234 386 3.4E-42 T 13-10-2018 IPR000160 GGDEF domain ambt_01060 bc993c6d119aeda66af39258c07c412a 163 Pfam PF09351 Domain of unknown function (DUF1993) 15 150 5.4E-24 T 13-10-2018 IPR018531 Protein of unknown function DUF1993 ambt_01060 bc993c6d119aeda66af39258c07c412a 163 SUPERFAMILY SSF109854 7 157 2.11E-26 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ambt_01060 bc993c6d119aeda66af39258c07c412a 163 Gene3D G3DSA:1.20.120.450 1 163 4.6E-36 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ambt_16150 cc8df249d19c10de09fb3c6255190e35 355 SMART SM00842 12 179 0.0015 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 ambt_16150 cc8df249d19c10de09fb3c6255190e35 355 SUPERFAMILY SSF53067 188 346 2.05E-12 T 13-10-2018 ambt_16150 cc8df249d19c10de09fb3c6255190e35 355 Pfam PF11104 Type IV pilus assembly protein PilM; 14 350 2.8E-103 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM ambt_16150 cc8df249d19c10de09fb3c6255190e35 355 Gene3D G3DSA:3.30.420.40 187 314 1.4E-69 T 13-10-2018 ambt_16150 cc8df249d19c10de09fb3c6255190e35 355 Gene3D G3DSA:3.30.1490.300 88 147 1.4E-69 T 13-10-2018 ambt_16150 cc8df249d19c10de09fb3c6255190e35 355 SUPERFAMILY SSF53067 12 178 2.22E-8 T 13-10-2018 ambt_16150 cc8df249d19c10de09fb3c6255190e35 355 PIRSF PIRSF019169 1 351 3.8E-100 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM ambt_16150 cc8df249d19c10de09fb3c6255190e35 355 Gene3D G3DSA:3.30.420.40 13 348 1.4E-69 T 13-10-2018 ambt_16150 cc8df249d19c10de09fb3c6255190e35 355 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 350 9.2E-75 T 13-10-2018 IPR005883 Type IV pilus assembly protein PilM ambt_12175 7d9f6cfe104240300af1b485970e000e 146 Pfam PF05099 Tellurite resistance protein TerB 10 139 6.9E-38 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal ambt_12175 7d9f6cfe104240300af1b485970e000e 146 Gene3D G3DSA:1.10.3680.10 10 142 1.4E-25 T 13-10-2018 IPR029024 TerB-like ambt_12175 7d9f6cfe104240300af1b485970e000e 146 SUPERFAMILY SSF158682 14 142 1.44E-26 T 13-10-2018 IPR029024 TerB-like ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 Gene3D G3DSA:3.40.50.720 4 253 2.1E-76 T 13-10-2018 ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 SUPERFAMILY SSF51735 5 253 1.9E-71 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.0E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.0E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.0E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.0E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.0E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.0E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06565 459a55510f8eda1377e878d7d3833cbd 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 5.2E-60 T 13-10-2018 ambt_05270 babba68d021564666c1622b207c255b4 87 SUPERFAMILY SSF47413 4 76 5.07E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_05270 babba68d021564666c1622b207c255b4 87 Pfam PF12844 Helix-turn-helix domain 10 68 6.8E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_05270 babba68d021564666c1622b207c255b4 87 SMART SM00530 11 70 2.2E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_05270 babba68d021564666c1622b207c255b4 87 Gene3D G3DSA:1.10.260.40 8 86 1.7E-21 T 13-10-2018 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 SMART SM00387 354 469 1.1E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 SMART SM00073 791 884 0.0055 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 Gene3D G3DSA:3.40.50.2300 600 738 8.1E-26 T 13-10-2018 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 SUPERFAMILY SSF52172 609 738 1.32E-24 T 13-10-2018 IPR011006 CheY-like superfamily ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 Gene3D G3DSA:1.10.287.130 218 305 8.4E-20 T 13-10-2018 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 SMART SM00388 243 307 1.0E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 SMART SM00448 611 727 5.0E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 Gene3D G3DSA:1.20.120.160 767 889 3.0E-13 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 5.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 5.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 5.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 5.8E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 Gene3D G3DSA:3.30.565.10 308 471 8.5E-46 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 Pfam PF00072 Response regulator receiver domain 613 726 2.2E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 SUPERFAMILY SSF55874 296 469 1.44E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 306 6.4E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 SUPERFAMILY SSF47226 772 887 3.27E-16 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 468 3.5E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 Pfam PF01627 Hpt domain 800 876 2.2E-8 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_17335 40781a7f7ea760f54e07622eeb1e32f4 891 SUPERFAMILY SSF47384 228 307 3.34E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_16175 167f068355569cccf00499dc389ad396 171 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 28.764 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ambt_16175 167f068355569cccf00499dc389ad396 171 PRINTS PR01100 Shikimate kinase family signature 77 86 3.4E-27 T 13-10-2018 ambt_16175 167f068355569cccf00499dc389ad396 171 PRINTS PR01100 Shikimate kinase family signature 7 22 3.4E-27 T 13-10-2018 ambt_16175 167f068355569cccf00499dc389ad396 171 PRINTS PR01100 Shikimate kinase family signature 31 44 3.4E-27 T 13-10-2018 ambt_16175 167f068355569cccf00499dc389ad396 171 PRINTS PR01100 Shikimate kinase family signature 59 67 3.4E-27 T 13-10-2018 ambt_16175 167f068355569cccf00499dc389ad396 171 PRINTS PR01100 Shikimate kinase family signature 98 115 3.4E-27 T 13-10-2018 ambt_16175 167f068355569cccf00499dc389ad396 171 Gene3D G3DSA:3.40.50.300 1 170 4.4E-56 T 13-10-2018 ambt_16175 167f068355569cccf00499dc389ad396 171 Pfam PF01202 Shikimate kinase 13 169 3.8E-55 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ambt_16175 167f068355569cccf00499dc389ad396 171 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 13-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ambt_16175 167f068355569cccf00499dc389ad396 171 SUPERFAMILY SSF52540 4 168 2.02E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_17245 2fa74e7799872506633d4825d7883a5d 508 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 16 33 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ambt_17245 2fa74e7799872506633d4825d7883a5d 508 SUPERFAMILY SSF54373 232 325 9.29E-8 T 13-10-2018 ambt_17245 2fa74e7799872506633d4825d7883a5d 508 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 387 480 5.1E-10 T 13-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ambt_17245 2fa74e7799872506633d4825d7883a5d 508 Pfam PF01266 FAD dependent oxidoreductase 12 335 2.8E-52 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ambt_17245 2fa74e7799872506633d4825d7883a5d 508 Gene3D G3DSA:3.30.9.10 89 326 4.6E-134 T 13-10-2018 ambt_17245 2fa74e7799872506633d4825d7883a5d 508 SUPERFAMILY SSF51905 9 327 1.43E-34 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_17245 2fa74e7799872506633d4825d7883a5d 508 Gene3D G3DSA:3.50.50.60 12 372 4.6E-134 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_17245 2fa74e7799872506633d4825d7883a5d 508 Gene3D G3DSA:1.10.8.870 397 466 6.0E-23 T 13-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ambt_17245 2fa74e7799872506633d4825d7883a5d 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 319 325 5.7E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ambt_17245 2fa74e7799872506633d4825d7883a5d 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 353 365 5.7E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ambt_17245 2fa74e7799872506633d4825d7883a5d 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 11 23 5.7E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ambt_17245 2fa74e7799872506633d4825d7883a5d 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 85 97 5.7E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ambt_17245 2fa74e7799872506633d4825d7883a5d 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 52 5.7E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ambt_17245 2fa74e7799872506633d4825d7883a5d 508 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 24 34 5.7E-28 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ambt_08345 24557e01bee4ad81a0e141fa9fa6a249 241 Gene3D G3DSA:2.60.120.10 8 238 4.9E-80 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_08345 24557e01bee4ad81a0e141fa9fa6a249 241 SUPERFAMILY SSF51182 1 239 5.48E-64 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_08345 24557e01bee4ad81a0e141fa9fa6a249 241 Pfam PF02678 Pirin 15 119 9.0E-33 T 13-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 ambt_08345 24557e01bee4ad81a0e141fa9fa6a249 241 Gene3D G3DSA:2.60.120.10 11 135 4.9E-80 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_08345 24557e01bee4ad81a0e141fa9fa6a249 241 PIRSF PIRSF006232 1 236 1.8E-48 T 13-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 ambt_06370 7da4a3a72fdbb54c0df6b4d21b2e15f5 175 SUPERFAMILY SSF52540 2 105 2.41E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_06370 7da4a3a72fdbb54c0df6b4d21b2e15f5 175 Gene3D G3DSA:3.40.50.300 1 140 9.8E-13 T 13-10-2018 ambt_05890 e7d73a721432cd5fc2a4e585ea6e94af 552 PRINTS PR00175 Sodium/alanine symporter signature 515 535 5.3E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_05890 e7d73a721432cd5fc2a4e585ea6e94af 552 PRINTS PR00175 Sodium/alanine symporter signature 93 115 5.3E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_05890 e7d73a721432cd5fc2a4e585ea6e94af 552 PRINTS PR00175 Sodium/alanine symporter signature 184 202 5.3E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_05890 e7d73a721432cd5fc2a4e585ea6e94af 552 PRINTS PR00175 Sodium/alanine symporter signature 456 478 5.3E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_05890 e7d73a721432cd5fc2a4e585ea6e94af 552 PRINTS PR00175 Sodium/alanine symporter signature 212 231 5.3E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_05890 e7d73a721432cd5fc2a4e585ea6e94af 552 PRINTS PR00175 Sodium/alanine symporter signature 307 325 5.3E-52 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_05890 e7d73a721432cd5fc2a4e585ea6e94af 552 Pfam PF01235 Sodium:alanine symporter family 56 552 2.9E-142 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_05890 e7d73a721432cd5fc2a4e585ea6e94af 552 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_05890 e7d73a721432cd5fc2a4e585ea6e94af 552 TIGRFAM TIGR00835 agcS: amino acid carrier protein 21 546 1.8E-179 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_07020 62d77040d8dc017b55fcdeedce8fdd63 467 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 37 362 4.9E-49 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ambt_07020 62d77040d8dc017b55fcdeedce8fdd63 467 Gene3D G3DSA:3.20.20.70 26 376 2.6E-109 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_07020 62d77040d8dc017b55fcdeedce8fdd63 467 SUPERFAMILY SSF51395 24 376 1.95E-98 T 13-10-2018 ambt_20645 941832959580220a3be645a00d9d9f1f 100 Pfam PF00547 Urease, gamma subunit 1 99 2.5E-46 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20645 941832959580220a3be645a00d9d9f1f 100 PIRSF PIRSF001223 1 100 6.3E-49 T 13-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20645 941832959580220a3be645a00d9d9f1f 100 Gene3D G3DSA:3.30.280.10 1 100 3.2E-47 T 13-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20645 941832959580220a3be645a00d9d9f1f 100 SUPERFAMILY SSF54111 1 99 6.41E-45 T 13-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20645 941832959580220a3be645a00d9d9f1f 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.56 T 13-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20645 941832959580220a3be645a00d9d9f1f 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.5E-49 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20645 941832959580220a3be645a00d9d9f1f 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 9.0E-39 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_18470 6d6909516408b2c4971be0fcd6a3d558 374 Gene3D G3DSA:3.20.20.70 9 369 1.4E-98 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_18470 6d6909516408b2c4971be0fcd6a3d558 374 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 364 3.2E-24 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ambt_18470 6d6909516408b2c4971be0fcd6a3d558 374 SUPERFAMILY SSF102114 36 367 1.06E-46 T 13-10-2018 ambt_18470 6d6909516408b2c4971be0fcd6a3d558 374 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 9 372 8.0E-151 T 13-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 ambt_18470 6d6909516408b2c4971be0fcd6a3d558 374 Pfam PF04055 Radical SAM superfamily 82 227 3.1E-9 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_18470 6d6909516408b2c4971be0fcd6a3d558 374 SMART SM00876 256 365 9.4E-26 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ambt_19690 8abc0123fe5ea776641940bff72f11e8 686 Pfam PF01431 Peptidase family M13 482 683 7.1E-74 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ambt_19690 8abc0123fe5ea776641940bff72f11e8 686 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 474 486 1.9E-22 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ambt_19690 8abc0123fe5ea776641940bff72f11e8 686 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 513 529 1.9E-22 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ambt_19690 8abc0123fe5ea776641940bff72f11e8 686 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 492 504 1.9E-22 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ambt_19690 8abc0123fe5ea776641940bff72f11e8 686 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 584 595 1.9E-22 T 13-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ambt_19690 8abc0123fe5ea776641940bff72f11e8 686 Gene3D G3DSA:3.40.390.10 48 686 8.4E-239 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 ambt_19690 8abc0123fe5ea776641940bff72f11e8 686 SUPERFAMILY SSF55486 41 686 2.2E-207 T 13-10-2018 ambt_19690 8abc0123fe5ea776641940bff72f11e8 686 Gene3D G3DSA:1.10.1380.10 79 469 8.4E-239 T 13-10-2018 ambt_19690 8abc0123fe5ea776641940bff72f11e8 686 Pfam PF05649 Peptidase family M13 53 430 8.6E-100 T 13-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 ambt_05490 abe8ee414fe5bb6fb379d4ac3a46f6ef 644 Pfam PF17201 Cache 3/Cache 2 fusion domain 38 246 4.8E-49 T 13-10-2018 IPR033462 Cache 3/Cache 2 fusion domain ambt_05490 abe8ee414fe5bb6fb379d4ac3a46f6ef 644 SMART SM00283 382 643 1.5E-42 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_05490 abe8ee414fe5bb6fb379d4ac3a46f6ef 644 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 441 608 1.2E-35 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_05490 abe8ee414fe5bb6fb379d4ac3a46f6ef 644 Gene3D G3DSA:1.10.287.950 313 644 4.0E-64 T 13-10-2018 ambt_05490 abe8ee414fe5bb6fb379d4ac3a46f6ef 644 SUPERFAMILY SSF103190 111 207 1.96E-12 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ambt_05490 abe8ee414fe5bb6fb379d4ac3a46f6ef 644 SUPERFAMILY SSF58104 335 644 2.22E-62 T 13-10-2018 ambt_05490 abe8ee414fe5bb6fb379d4ac3a46f6ef 644 SMART SM00304 313 367 3.6E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_01580 8ab02b3e77123747168dafd1297cbb0b 190 Gene3D G3DSA:1.20.1050.10 77 180 8.0E-7 T 13-10-2018 ambt_01580 8ab02b3e77123747168dafd1297cbb0b 190 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 72 8.4E-11 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_01580 8ab02b3e77123747168dafd1297cbb0b 190 Gene3D G3DSA:3.40.30.10 1 76 5.3E-16 T 13-10-2018 ambt_01580 8ab02b3e77123747168dafd1297cbb0b 190 SUPERFAMILY SSF47616 81 180 7.58E-8 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_01580 8ab02b3e77123747168dafd1297cbb0b 190 SUPERFAMILY SSF52833 1 78 2.82E-15 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_07735 ccfe745b08679e1fde57eb1aa77ca2c9 160 PRINTS PR01011 Glutathione peroxidase family signature 56 72 1.3E-20 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ambt_07735 ccfe745b08679e1fde57eb1aa77ca2c9 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 1.3E-20 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ambt_07735 ccfe745b08679e1fde57eb1aa77ca2c9 160 PRINTS PR01011 Glutathione peroxidase family signature 21 38 1.3E-20 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ambt_07735 ccfe745b08679e1fde57eb1aa77ca2c9 160 Pfam PF00255 Glutathione peroxidase 3 110 6.1E-41 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ambt_07735 ccfe745b08679e1fde57eb1aa77ca2c9 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 13-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 ambt_07735 ccfe745b08679e1fde57eb1aa77ca2c9 160 PIRSF PIRSF000303 1 160 2.1E-63 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ambt_07735 ccfe745b08679e1fde57eb1aa77ca2c9 160 SUPERFAMILY SSF52833 1 159 3.74E-61 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_07735 ccfe745b08679e1fde57eb1aa77ca2c9 160 Gene3D G3DSA:3.40.30.10 1 160 1.6E-70 T 13-10-2018 ambt_02565 ee32dd49dda96dac2188b0b91b5011fc 148 Pfam PF11215 Protein of unknown function (DUF3010) 1 135 8.5E-54 T 13-10-2018 IPR021378 Protein of unknown function DUF3010 ambt_13660 c2d48dc2ba39b2c19c2d1617669ae164 171 Gene3D G3DSA:3.30.910.20 25 168 6.9E-37 T 13-10-2018 IPR024930 Skp domain superfamily ambt_13660 c2d48dc2ba39b2c19c2d1617669ae164 171 SMART SM00935 14 168 2.9E-37 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 ambt_13660 c2d48dc2ba39b2c19c2d1617669ae164 171 PIRSF PIRSF002094 1 171 6.1E-44 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 ambt_13660 c2d48dc2ba39b2c19c2d1617669ae164 171 SUPERFAMILY SSF111384 25 167 8.63E-29 T 13-10-2018 ambt_13660 c2d48dc2ba39b2c19c2d1617669ae164 171 Pfam PF03938 Outer membrane protein (OmpH-like) 13 166 5.2E-26 T 13-10-2018 IPR005632 Chaperone protein Skp GO:0051082 ambt_04755 40a543d73638cef48082d69d300a9e4b 279 Gene3D G3DSA:3.40.50.1820 4 272 1.4E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_04755 40a543d73638cef48082d69d300a9e4b 279 Pfam PF00561 alpha/beta hydrolase fold 24 264 5.7E-20 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_04755 40a543d73638cef48082d69d300a9e4b 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 7.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_04755 40a543d73638cef48082d69d300a9e4b 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 107 120 7.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_04755 40a543d73638cef48082d69d300a9e4b 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 7.4E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_04755 40a543d73638cef48082d69d300a9e4b 279 SUPERFAMILY SSF53474 7 278 2.97E-43 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_01985 af317909bb76bd1e9c1cf786569bb4dc 258 Pfam PF03883 Peroxide stress protein YaaA 1 243 2.6E-94 T 13-10-2018 IPR005583 Peroxide stress protein YaaA ambt_01985 af317909bb76bd1e9c1cf786569bb4dc 258 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.683 T 13-10-2018 IPR005583 Peroxide stress protein YaaA ambt_01095 482ca2f912aed357b8fbbf67222c5c69 209 SUPERFAMILY SSF52172 1 127 1.14E-25 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01095 482ca2f912aed357b8fbbf67222c5c69 209 SMART SM00448 1 114 5.5E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01095 482ca2f912aed357b8fbbf67222c5c69 209 SMART SM00421 144 200 0.0023 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01095 482ca2f912aed357b8fbbf67222c5c69 209 SUPERFAMILY SSF46894 139 191 8.84E-11 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_01095 482ca2f912aed357b8fbbf67222c5c69 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 191 2.8E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01095 482ca2f912aed357b8fbbf67222c5c69 209 Gene3D G3DSA:3.40.50.12740 1 205 7.3E-42 T 13-10-2018 ambt_01095 482ca2f912aed357b8fbbf67222c5c69 209 Pfam PF00072 Response regulator receiver domain 3 115 5.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01095 482ca2f912aed357b8fbbf67222c5c69 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 5.9E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01095 482ca2f912aed357b8fbbf67222c5c69 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 5.9E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01095 482ca2f912aed357b8fbbf67222c5c69 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 5.9E-7 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01455 9890dbee35c59c5f3ca870ae114b9a0c 132 PIRSF PIRSF018193 1 132 2.2E-44 T 13-10-2018 IPR016716 Regulator of ribonuclease activity B ambt_01455 9890dbee35c59c5f3ca870ae114b9a0c 132 SUPERFAMILY SSF89946 5 124 5.49E-36 T 13-10-2018 IPR036701 RraB-like superfamily ambt_01455 9890dbee35c59c5f3ca870ae114b9a0c 132 Pfam PF06877 Regulator of ribonuclease activity B 13 113 4.3E-29 T 13-10-2018 IPR009671 Regulator of ribonuclease activity B domain ambt_01455 9890dbee35c59c5f3ca870ae114b9a0c 132 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 5 117 28.59 T 13-10-2018 IPR016716 Regulator of ribonuclease activity B ambt_01455 9890dbee35c59c5f3ca870ae114b9a0c 132 Gene3D G3DSA:3.30.70.970 1 127 2.0E-45 T 13-10-2018 IPR036701 RraB-like superfamily ambt_13595 6d27d9819164be17082a9b22bf347043 1299 Gene3D G3DSA:3.40.50.880 986 1299 3.8E-134 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_13595 6d27d9819164be17082a9b22bf347043 1299 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1297 0.0 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_13595 6d27d9819164be17082a9b22bf347043 1299 SUPERFAMILY SSF82697 1 152 2.14E-46 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_13595 6d27d9819164be17082a9b22bf347043 1299 Gene3D G3DSA:3.90.650.10 422 606 1.5E-54 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ambt_13595 6d27d9819164be17082a9b22bf347043 1299 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1045 1298 5.1E-106 T 13-10-2018 ambt_13595 6d27d9819164be17082a9b22bf347043 1299 Gene3D G3DSA:1.10.8.750 153 213 2.2E-25 T 13-10-2018 ambt_13595 6d27d9819164be17082a9b22bf347043 1299 SUPERFAMILY SSF55326 621 816 1.33E-65 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ambt_13595 6d27d9819164be17082a9b22bf347043 1299 SUPERFAMILY SSF52317 1041 1298 6.67E-93 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_13595 6d27d9819164be17082a9b22bf347043 1299 Pfam PF02769 AIR synthase related protein, C-terminal domain 838 967 4.1E-12 T 13-10-2018 IPR010918 PurM-like, C-terminal domain ambt_13595 6d27d9819164be17082a9b22bf347043 1299 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 588 1.0E-27 T 13-10-2018 IPR010918 PurM-like, C-terminal domain ambt_13595 6d27d9819164be17082a9b22bf347043 1299 SMART SM01211 1045 1298 1.1E-150 T 13-10-2018 ambt_13595 6d27d9819164be17082a9b22bf347043 1299 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1299 21.044 T 13-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ambt_13595 6d27d9819164be17082a9b22bf347043 1299 SUPERFAMILY SSF109736 156 220 1.83E-20 T 13-10-2018 ambt_13595 6d27d9819164be17082a9b22bf347043 1299 SUPERFAMILY SSF55326 221 428 1.08E-63 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ambt_13595 6d27d9819164be17082a9b22bf347043 1299 Gene3D G3DSA:3.30.1330.10 614 807 1.1E-22 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ambt_13595 6d27d9819164be17082a9b22bf347043 1299 Gene3D G3DSA:3.90.650.10 808 985 6.3E-27 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ambt_13595 6d27d9819164be17082a9b22bf347043 1299 SUPERFAMILY SSF56042 823 1039 1.44E-46 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ambt_13595 6d27d9819164be17082a9b22bf347043 1299 SUPERFAMILY SSF56042 431 615 5.08E-53 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ambt_13595 6d27d9819164be17082a9b22bf347043 1299 Gene3D G3DSA:3.30.1330.10 214 421 1.7E-40 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 SUPERFAMILY SSF55785 149 257 2.62E-13 T 13-10-2018 IPR035965 PAS domain superfamily ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 Pfam PF08447 PAS fold 165 249 1.1E-13 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 Pfam PF08447 PAS fold 34 120 5.1E-7 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 SMART SM00086 84 126 1.9E-7 T 13-10-2018 IPR001610 PAC motif ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 SMART SM00086 213 255 0.016 T 13-10-2018 IPR001610 PAC motif ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 133 4.2E-20 T 13-10-2018 IPR000014 PAS domain ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 Gene3D G3DSA:3.30.450.20 3 146 1.6E-19 T 13-10-2018 ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 SUPERFAMILY SSF55073 278 453 1.18E-36 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 269 378 8.0E-32 T 13-10-2018 IPR000160 GGDEF domain ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 SUPERFAMILY SSF55785 17 128 2.79E-16 T 13-10-2018 IPR035965 PAS domain superfamily ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 SMART SM00267 262 455 1.7E-29 T 13-10-2018 IPR000160 GGDEF domain ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 Gene3D G3DSA:3.30.450.20 149 259 1.3E-16 T 13-10-2018 ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 375 4.9E-30 T 13-10-2018 IPR000160 GGDEF domain ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 SMART SM00091 11 77 5.4 T 13-10-2018 IPR000014 PAS domain ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 SMART SM00091 138 209 0.44 T 13-10-2018 IPR000014 PAS domain ambt_10870 f7c3d6a3c23b095a349cf5482dff8e9f 457 Gene3D G3DSA:3.30.70.270 260 457 7.5E-44 T 13-10-2018 ambt_07125 b430eba7046780101092129740effba3 397 SUPERFAMILY SSF103473 10 396 7.85E-49 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_07125 b430eba7046780101092129740effba3 397 Gene3D G3DSA:1.20.1250.20 8 394 5.0E-49 T 13-10-2018 ambt_07125 b430eba7046780101092129740effba3 397 Pfam PF07690 Major Facilitator Superfamily 15 351 1.3E-36 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_07125 b430eba7046780101092129740effba3 397 PRINTS PR01035 Tetracycline resistance protein signature 47 66 3.2E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ambt_07125 b430eba7046780101092129740effba3 397 PRINTS PR01035 Tetracycline resistance protein signature 17 33 3.2E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ambt_07125 b430eba7046780101092129740effba3 397 PRINTS PR01035 Tetracycline resistance protein signature 345 368 3.2E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ambt_07125 b430eba7046780101092129740effba3 397 PRINTS PR01035 Tetracycline resistance protein signature 258 278 3.2E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ambt_08010 616a8763e5e2e23bd0179440d858e0a1 153 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 13-10-2018 IPR000614 Free Met sulfoxide reductase conserved site ambt_08010 616a8763e5e2e23bd0179440d858e0a1 153 Pfam PF13185 GAF domain 38 135 5.3E-10 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_08010 616a8763e5e2e23bd0179440d858e0a1 153 SUPERFAMILY SSF55781 2 146 2.23E-42 T 13-10-2018 ambt_08010 616a8763e5e2e23bd0179440d858e0a1 153 SMART SM00065 22 151 0.0071 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_08010 616a8763e5e2e23bd0179440d858e0a1 153 Gene3D G3DSA:3.30.450.40 1 153 1.2E-65 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_16780 3d424dd54da8c66840d604b42685399c 688 Pfam PF00593 TonB dependent receptor 221 686 2.5E-34 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_16780 3d424dd54da8c66840d604b42685399c 688 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 147 5.5E-18 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_16780 3d424dd54da8c66840d604b42685399c 688 Gene3D G3DSA:2.170.130.10 47 153 7.2E-39 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_16780 3d424dd54da8c66840d604b42685399c 688 Gene3D G3DSA:2.40.170.20 155 688 1.6E-94 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_16780 3d424dd54da8c66840d604b42685399c 688 SUPERFAMILY SSF56935 41 688 4.68E-94 T 13-10-2018 ambt_14140 abcd6b46fd1047d6e72f5e6ab3daf6cb 116 Pfam PF05717 IS66 Orf2 like protein 9 103 7.4E-37 T 13-10-2018 IPR008878 Transposase IS66, Orf2 ambt_10095 abcd6b46fd1047d6e72f5e6ab3daf6cb 116 Pfam PF05717 IS66 Orf2 like protein 9 103 7.4E-37 T 13-10-2018 IPR008878 Transposase IS66, Orf2 ambt_10560 abcd6b46fd1047d6e72f5e6ab3daf6cb 116 Pfam PF05717 IS66 Orf2 like protein 9 103 7.4E-37 T 13-10-2018 IPR008878 Transposase IS66, Orf2 ambt_00275 381bcee9c22de96211518883b9540815 649 Pfam PF00501 AMP-binding enzyme 84 522 6.3E-95 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ambt_00275 381bcee9c22de96211518883b9540815 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.3E-23 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ambt_00275 381bcee9c22de96211518883b9540815 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.004 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 ambt_00275 381bcee9c22de96211518883b9540815 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 13-10-2018 IPR020845 AMP-binding, conserved site ambt_00275 381bcee9c22de96211518883b9540815 649 SUPERFAMILY SSF56801 12 643 5.76E-187 T 13-10-2018 ambt_00275 381bcee9c22de96211518883b9540815 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 22 643 0.0 T 13-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 ambt_00275 381bcee9c22de96211518883b9540815 649 Gene3D G3DSA:3.30.300.30 518 648 5.3E-30 T 13-10-2018 ambt_00275 381bcee9c22de96211518883b9540815 649 Gene3D G3DSA:3.40.50.12780 50 515 2.2E-109 T 13-10-2018 ambt_00275 381bcee9c22de96211518883b9540815 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.8E-21 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 ambt_11900 9cd2b442a88ce35a7aee3dc7ccd99bb5 369 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 197 359 6.1E-48 T 13-10-2018 IPR000160 GGDEF domain ambt_11900 9cd2b442a88ce35a7aee3dc7ccd99bb5 369 SUPERFAMILY SSF55073 205 360 3.92E-46 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_11900 9cd2b442a88ce35a7aee3dc7ccd99bb5 369 Pfam PF00990 Diguanylate cyclase, GGDEF domain 200 356 1.1E-46 T 13-10-2018 IPR000160 GGDEF domain ambt_11900 9cd2b442a88ce35a7aee3dc7ccd99bb5 369 Gene3D G3DSA:3.30.70.270 193 367 8.9E-57 T 13-10-2018 ambt_11900 9cd2b442a88ce35a7aee3dc7ccd99bb5 369 SMART SM00267 189 360 1.7E-58 T 13-10-2018 IPR000160 GGDEF domain ambt_14755 1d2fd609dd95edc814a2535b4fb8e376 236 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 149 1.4E-27 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ambt_14755 1d2fd609dd95edc814a2535b4fb8e376 236 SUPERFAMILY SSF57863 87 150 6.28E-8 T 13-10-2018 IPR037278 ARFGAP/RecO-like zinc finger ambt_14755 1d2fd609dd95edc814a2535b4fb8e376 236 Gene3D G3DSA:2.40.50.140 3 77 2.5E-29 T 13-10-2018 ambt_14755 1d2fd609dd95edc814a2535b4fb8e376 236 Pfam PF11967 Recombination protein O N terminal 6 77 1.1E-22 T 13-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal ambt_14755 1d2fd609dd95edc814a2535b4fb8e376 236 SUPERFAMILY SSF50249 5 76 1.64E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_14755 1d2fd609dd95edc814a2535b4fb8e376 236 Pfam PF02565 Recombination protein O C terminal 85 230 5.3E-15 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ambt_14755 1d2fd609dd95edc814a2535b4fb8e376 236 Gene3D G3DSA:1.20.1440.120 80 236 1.0E-40 T 13-10-2018 ambt_14755 1d2fd609dd95edc814a2535b4fb8e376 236 Hamap MF_00201 DNA repair protein RecO [recO]. 2 235 18.793 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ambt_08935 e187229833067ce27fe8c1b4df059293 211 Gene3D G3DSA:3.40.50.12740 2 210 1.2E-44 T 13-10-2018 ambt_08935 e187229833067ce27fe8c1b4df059293 211 Pfam PF00072 Response regulator receiver domain 4 116 2.2E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_08935 e187229833067ce27fe8c1b4df059293 211 SUPERFAMILY SSF46894 141 208 2.72E-17 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_08935 e187229833067ce27fe8c1b4df059293 211 SMART SM00421 148 205 1.4E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_08935 e187229833067ce27fe8c1b4df059293 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.0E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_08935 e187229833067ce27fe8c1b4df059293 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.0E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_08935 e187229833067ce27fe8c1b4df059293 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.0E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_08935 e187229833067ce27fe8c1b4df059293 211 SUPERFAMILY SSF52172 1 129 4.98E-23 T 13-10-2018 IPR011006 CheY-like superfamily ambt_08935 e187229833067ce27fe8c1b4df059293 211 SMART SM00448 2 116 1.2E-13 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_08935 e187229833067ce27fe8c1b4df059293 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 204 5.7E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_08935 e187229833067ce27fe8c1b4df059293 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_03950 a8357bf208737b79cd94a6e916c0ca5b 143 SUPERFAMILY SSF54919 1 140 1.27E-60 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ambt_03950 a8357bf208737b79cd94a6e916c0ca5b 143 Gene3D G3DSA:3.30.70.141 1 143 2.3E-59 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ambt_03950 a8357bf208737b79cd94a6e916c0ca5b 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 6.6E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ambt_03950 a8357bf208737b79cd94a6e916c0ca5b 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 6.6E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ambt_03950 a8357bf208737b79cd94a6e916c0ca5b 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 6.6E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ambt_03950 a8357bf208737b79cd94a6e916c0ca5b 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 6.6E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ambt_03950 a8357bf208737b79cd94a6e916c0ca5b 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 6.6E-41 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ambt_03950 a8357bf208737b79cd94a6e916c0ca5b 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 13-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_03950 a8357bf208737b79cd94a6e916c0ca5b 143 SMART SM00562 3 140 3.1E-88 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ambt_03950 a8357bf208737b79cd94a6e916c0ca5b 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 7.1E-58 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ambt_03950 a8357bf208737b79cd94a6e916c0ca5b 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.52 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ambt_05755 8565b44a2b0a3cbb223a4b26a3dd5c16 469 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 462 2.8E-17 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_05755 8565b44a2b0a3cbb223a4b26a3dd5c16 469 SMART SM00387 352 464 5.6E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_05755 8565b44a2b0a3cbb223a4b26a3dd5c16 469 Gene3D G3DSA:3.30.565.10 306 466 1.5E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_05755 8565b44a2b0a3cbb223a4b26a3dd5c16 469 Gene3D G3DSA:1.10.287.130 188 302 1.8E-19 T 13-10-2018 ambt_05755 8565b44a2b0a3cbb223a4b26a3dd5c16 469 SMART SM00388 243 307 3.5E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_05755 8565b44a2b0a3cbb223a4b26a3dd5c16 469 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 304 3.8E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_05755 8565b44a2b0a3cbb223a4b26a3dd5c16 469 SUPERFAMILY SSF55874 296 464 2.36E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_05755 8565b44a2b0a3cbb223a4b26a3dd5c16 469 SUPERFAMILY SSF47384 228 305 5.3E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_05755 8565b44a2b0a3cbb223a4b26a3dd5c16 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 417 3.0E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05755 8565b44a2b0a3cbb223a4b26a3dd5c16 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 442 3.0E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05755 8565b44a2b0a3cbb223a4b26a3dd5c16 469 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 3.0E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_15975 dfad7453a8143dd506962938957b450b 312 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 285 44.668 T 13-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 ambt_15975 dfad7453a8143dd506962938957b450b 312 Pfam PF02666 Phosphatidylserine decarboxylase 63 280 6.9E-62 T 13-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 ambt_15975 dfad7453a8143dd506962938957b450b 312 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 283 2.7E-79 T 13-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 ambt_03910 605b316546e834043793802df9d142a1 392 Pfam PF00266 Aminotransferase class-V 7 370 4.5E-83 T 13-10-2018 IPR000192 Aminotransferase class V domain ambt_03910 605b316546e834043793802df9d142a1 392 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 199 218 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ambt_03910 605b316546e834043793802df9d142a1 392 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 3 392 47.764 T 13-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 ambt_03910 605b316546e834043793802df9d142a1 392 PIRSF PIRSF005572 4 386 9.5E-133 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ambt_03910 605b316546e834043793802df9d142a1 392 Gene3D G3DSA:3.40.640.10 18 264 8.7E-158 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_03910 605b316546e834043793802df9d142a1 392 Gene3D G3DSA:3.90.1150.10 7 378 8.7E-158 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_03910 605b316546e834043793802df9d142a1 392 SUPERFAMILY SSF53383 6 380 4.65E-107 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_18160 ed780a8f9e823fa85345f3ab627e149f 493 SUPERFAMILY SSF58104 211 493 6.93E-56 T 13-10-2018 ambt_18160 ed780a8f9e823fa85345f3ab627e149f 493 SMART SM00283 231 492 6.6E-47 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_18160 ed780a8f9e823fa85345f3ab627e149f 493 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 298 459 3.9E-38 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_18160 ed780a8f9e823fa85345f3ab627e149f 493 Gene3D G3DSA:1.10.287.950 171 493 2.2E-51 T 13-10-2018 ambt_21830 51e09c346fcc73a4f4713693857a0057 187 Gene3D G3DSA:1.10.10.10 110 182 8.9E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_21830 51e09c346fcc73a4f4713693857a0057 187 Gene3D G3DSA:1.10.1740.10 10 109 8.7E-13 T 13-10-2018 ambt_21830 51e09c346fcc73a4f4713693857a0057 187 SUPERFAMILY SSF88659 110 178 4.36E-9 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_21830 51e09c346fcc73a4f4713693857a0057 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 180 1.2E-22 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_21830 51e09c346fcc73a4f4713693857a0057 187 SUPERFAMILY SSF88946 26 105 1.6E-14 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_21830 51e09c346fcc73a4f4713693857a0057 187 Pfam PF08281 Sigma-70, region 4 135 178 4.3E-8 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_21830 51e09c346fcc73a4f4713693857a0057 187 Pfam PF04542 Sigma-70 region 2 31 95 8.7E-12 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_07475 b5b7a8fee6355e801200d9128a8fe576 851 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 280 462 1.0E-20 T 13-10-2018 IPR004477 ComEC/Rec2-related protein ambt_07475 b5b7a8fee6355e801200d9128a8fe576 851 Pfam PF00753 Metallo-beta-lactamase superfamily 568 644 3.7E-5 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_07475 b5b7a8fee6355e801200d9128a8fe576 851 SMART SM00849 570 749 6.5E-4 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_07475 b5b7a8fee6355e801200d9128a8fe576 851 Pfam PF03772 Competence protein 259 537 6.9E-43 T 13-10-2018 IPR004477 ComEC/Rec2-related protein ambt_07475 b5b7a8fee6355e801200d9128a8fe576 851 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 181 709 4.7E-75 T 13-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 ambt_07475 b5b7a8fee6355e801200d9128a8fe576 851 Pfam PF13567 Domain of unknown function (DUF4131) 37 224 1.9E-9 T 13-10-2018 IPR025405 Domain of unknown function DUF4131 ambt_07475 b5b7a8fee6355e801200d9128a8fe576 851 SUPERFAMILY SSF56281 561 815 3.36E-32 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_07475 b5b7a8fee6355e801200d9128a8fe576 851 Gene3D G3DSA:3.60.15.10 562 814 3.7E-41 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_21610 33e9c9e77e930c8284b7146d8a9ee29b 449 Gene3D G3DSA:1.10.443.10 208 448 2.6E-22 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_21610 33e9c9e77e930c8284b7146d8a9ee29b 449 Pfam PF00589 Phage integrase family 231 435 1.2E-14 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_21610 33e9c9e77e930c8284b7146d8a9ee29b 449 SUPERFAMILY SSF56349 200 443 1.68E-23 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_11100 9f5a1b8f36c1f7ee6f4a4feb4ac55101 607 Pfam PF13672 Protein phosphatase 2C 22 218 9.2E-15 T 13-10-2018 ambt_11100 9f5a1b8f36c1f7ee6f4a4feb4ac55101 607 SMART SM00332 2 265 2.7E-7 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_11100 9f5a1b8f36c1f7ee6f4a4feb4ac55101 607 Gene3D G3DSA:3.60.40.10 2 270 1.4E-36 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_11100 9f5a1b8f36c1f7ee6f4a4feb4ac55101 607 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 421 433 - T 13-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 ambt_11100 9f5a1b8f36c1f7ee6f4a4feb4ac55101 607 Pfam PF00069 Protein kinase domain 306 552 1.9E-34 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ambt_11100 9f5a1b8f36c1f7ee6f4a4feb4ac55101 607 Gene3D G3DSA:1.10.510.10 383 566 1.7E-36 T 13-10-2018 ambt_11100 9f5a1b8f36c1f7ee6f4a4feb4ac55101 607 SUPERFAMILY SSF56112 289 568 1.2E-50 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_11100 9f5a1b8f36c1f7ee6f4a4feb4ac55101 607 SUPERFAMILY SSF81606 5 268 1.11E-39 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_11100 9f5a1b8f36c1f7ee6f4a4feb4ac55101 607 Gene3D G3DSA:3.30.200.20 291 381 2.0E-8 T 13-10-2018 ambt_11100 9f5a1b8f36c1f7ee6f4a4feb4ac55101 607 SMART SM00331 25 250 3.2E-4 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_00580 16cfcc756d80808cc7af3c7dc87be9e7 757 Pfam PF03170 Bacterial cellulose synthase subunit 21 588 9.5E-66 T 13-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 ambt_00580 16cfcc756d80808cc7af3c7dc87be9e7 757 Gene3D G3DSA:2.60.120.260 23 154 3.7E-23 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_00580 16cfcc756d80808cc7af3c7dc87be9e7 757 Gene3D G3DSA:2.60.120.260 355 499 7.5E-27 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_10375 0da2d255c3c02820388cb436557aa6bf 225 SUPERFAMILY SSF48613 2 214 4.13E-11 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ambt_10375 0da2d255c3c02820388cb436557aa6bf 225 Gene3D G3DSA:1.20.910.10 1 214 4.5E-36 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 SMART SM00861 355 526 1.7E-63 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 Pfam PF02780 Transketolase, C-terminal domain 542 656 1.7E-14 T 13-10-2018 IPR033248 Transketolase, C-terminal domain ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 661 2.1E-303 T 13-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 525 9.6E-42 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 Gene3D G3DSA:3.40.50.920 539 662 2.7E-43 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 SUPERFAMILY SSF52922 534 663 4.58E-44 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 4.4E-165 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 SUPERFAMILY SSF52518 5 330 1.37E-118 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 SUPERFAMILY SSF52518 335 527 1.26E-64 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 Gene3D G3DSA:3.40.50.970 3 326 4.7E-130 T 13-10-2018 ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ambt_14400 c69a7aa9e1d04a3518333ab40786625b 664 Gene3D G3DSA:3.40.50.970 327 538 7.5E-79 T 13-10-2018 ambt_17980 55bf99932289fd5bca78f8489cdccbbc 233 Gene3D G3DSA:3.90.850.10 2 233 6.2E-79 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_17980 55bf99932289fd5bca78f8489cdccbbc 233 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 231 8.4E-51 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ambt_17980 55bf99932289fd5bca78f8489cdccbbc 233 SUPERFAMILY SSF56529 23 231 1.07E-64 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_02760 e9761400527c22caed05afab408c54fb 1134 Gene3D G3DSA:1.10.10.10 1 101 7.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_02760 e9761400527c22caed05afab408c54fb 1134 SUPERFAMILY SSF46894 4 98 4.82E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_02760 e9761400527c22caed05afab408c54fb 1134 Gene3D G3DSA:1.25.40.10 681 964 9.2E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02760 e9761400527c22caed05afab408c54fb 1134 SUPERFAMILY SSF48452 696 910 2.44E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02760 e9761400527c22caed05afab408c54fb 1134 SMART SM00862 23 98 3.7E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_02760 e9761400527c22caed05afab408c54fb 1134 Pfam PF00486 Transcriptional regulatory protein, C terminal 24 98 1.1E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_02760 e9761400527c22caed05afab408c54fb 1134 Gene3D G3DSA:3.40.50.300 140 334 1.4E-5 T 13-10-2018 ambt_02760 e9761400527c22caed05afab408c54fb 1134 SUPERFAMILY SSF52540 139 370 1.1E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_10415 d9b50e324e7201e15631c6b3a7fdeb51 171 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 169 2.6E-52 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ambt_10415 d9b50e324e7201e15631c6b3a7fdeb51 171 Gene3D G3DSA:1.20.1200.10 17 171 7.2E-50 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ambt_10415 d9b50e324e7201e15631c6b3a7fdeb51 171 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 22 169 5.0E-20 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ambt_10415 d9b50e324e7201e15631c6b3a7fdeb51 171 Pfam PF01923 Cobalamin adenosyltransferase 3 159 1.6E-51 T 13-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ambt_10415 d9b50e324e7201e15631c6b3a7fdeb51 171 SUPERFAMILY SSF89028 1 169 5.3E-51 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ambt_00345 40170aee913a04e084adc6240c1b3468 168 SUPERFAMILY SSF82153 28 163 2.75E-41 T 13-10-2018 IPR036378 FAS1 domain superfamily ambt_00345 40170aee913a04e084adc6240c1b3468 168 SMART SM00554 63 162 9.6E-31 T 13-10-2018 IPR000782 FAS1 domain ambt_00345 40170aee913a04e084adc6240c1b3468 168 Pfam PF02469 Fasciclin domain 39 161 3.9E-36 T 13-10-2018 IPR000782 FAS1 domain ambt_00345 40170aee913a04e084adc6240c1b3468 168 Gene3D G3DSA:2.30.180.10 10 162 6.3E-50 T 13-10-2018 IPR036378 FAS1 domain superfamily ambt_12580 9dd7256aee13d2a616996c703c2f8078 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ambt_12580 9dd7256aee13d2a616996c703c2f8078 128 SUPERFAMILY SSF54593 1 126 4.43E-33 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_12580 9dd7256aee13d2a616996c703c2f8078 128 Gene3D G3DSA:3.10.180.10 1 128 5.4E-46 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_12580 9dd7256aee13d2a616996c703c2f8078 128 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ambt_12580 9dd7256aee13d2a616996c703c2f8078 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.4E-22 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ambt_12580 9dd7256aee13d2a616996c703c2f8078 128 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 128 1.2E-61 T 13-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ambt_12525 baeeafacc185ba0a322d21a7390b63dd 362 Pfam PF03116 NQR2, RnfD, RnfE family 5 351 1.7E-101 T 13-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 ambt_12525 baeeafacc185ba0a322d21a7390b63dd 362 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 352 1.4E-126 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 ambt_12525 baeeafacc185ba0a322d21a7390b63dd 362 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 353 26.649 T 13-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 SUPERFAMILY SSF51621 11 873 2.83E-298 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 Gene3D G3DSA:1.20.1440.90 297 381 2.4E-20 T 13-10-2018 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 2 873 17.473 T 13-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 529 541 - T 13-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 Pfam PF00311 Phosphoenolpyruvate carboxylase 124 873 2.4E-267 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 240 255 1.4E-66 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 128 141 1.4E-66 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 701 727 1.4E-66 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 378 398 1.4E-66 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 569 598 1.4E-66 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 527 547 1.4E-66 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 181 197 1.4E-66 T 13-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ambt_00430 69c255db13d0986e9da51dea185c25eb 873 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 129 140 - T 13-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 314 383 1.6E-14 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 PIRSF PIRSF001604 37 649 3.5E-111 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 Gene3D G3DSA:2.40.50.140 308 380 1.0E-14 T 13-10-2018 ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 SUPERFAMILY SSF47781 388 558 9.64E-24 T 13-10-2018 IPR010994 RuvA domain 2-like ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 SUPERFAMILY SSF52113 573 648 1.44E-12 T 13-10-2018 IPR036420 BRCT domain superfamily ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 575 643 3.3E-10 T 13-10-2018 IPR001357 BRCT domain ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 Gene3D G3DSA:3.40.50.10190 561 649 5.3E-21 T 13-10-2018 IPR036420 BRCT domain superfamily ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 SUPERFAMILY SSF50249 309 385 1.88E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 Gene3D G3DSA:1.10.150.20 414 484 4.4E-7 T 13-10-2018 ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 SMART SM00532 37 430 2.4E-17 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 SUPERFAMILY SSF56091 41 304 1.77E-41 T 13-10-2018 ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 Gene3D G3DSA:3.30.470.90 95 307 1.2E-18 T 13-10-2018 ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 Pfam PF14520 Helix-hairpin-helix domain 429 480 5.0E-4 T 13-10-2018 ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 49 232 1.1E-14 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 ambt_07185 7015fa794af94cb92f2d80a6f286004f 649 Hamap MF_01588 DNA ligase [ligA]. 35 648 35.489 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 Pfam PF01472 PUA domain 275 348 6.2E-19 T 13-10-2018 IPR002478 PUA domain GO:0003723 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 Hamap MF_00456 Glutamate 5-kinase [proB]. 7 261 33.315 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 PRINTS PR00474 Glutamate 5-kinase family signature 114 135 5.1E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 PRINTS PR00474 Glutamate 5-kinase family signature 207 227 5.1E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 PRINTS PR00474 Glutamate 5-kinase family signature 146 173 5.1E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 PRINTS PR00474 Glutamate 5-kinase family signature 44 58 5.1E-38 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 Gene3D G3DSA:3.40.1160.10 3 263 2.6E-78 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_21855 6cfc1e1198667380feaa0884612cc012 365 TIGRFAM TIGR01027 proB: glutamate 5-kinase 7 363 7.3E-123 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 SUPERFAMILY SSF53633 7 254 1.44E-61 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_21855 6cfc1e1198667380feaa0884612cc012 365 Pfam PF00696 Amino acid kinase family 8 233 7.3E-39 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 PIRSF PIRSF000729 3 365 2.0E-126 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 SUPERFAMILY SSF88697 275 364 1.6E-22 T 13-10-2018 IPR015947 PUA-like superfamily ambt_21855 6cfc1e1198667380feaa0884612cc012 365 SMART SM00359 275 357 5.5E-17 T 13-10-2018 IPR002478 PUA domain GO:0003723 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 Gene3D G3DSA:2.30.130.10 264 365 8.6E-32 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 ambt_21855 6cfc1e1198667380feaa0884612cc012 365 ProSitePatterns PS00902 Glutamate 5-kinase signature. 205 222 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ambt_11810 2c7276c0f689260b0ba36b7c19269939 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 8.7E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ambt_11810 2c7276c0f689260b0ba36b7c19269939 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 48 64 8.7E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ambt_11810 2c7276c0f689260b0ba36b7c19269939 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 8.7E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ambt_11810 2c7276c0f689260b0ba36b7c19269939 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 82 97 8.7E-25 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ambt_11810 2c7276c0f689260b0ba36b7c19269939 155 SUPERFAMILY SSF52788 4 152 1.28E-48 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ambt_11810 2c7276c0f689260b0ba36b7c19269939 155 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 148 4.0E-41 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ambt_11810 2c7276c0f689260b0ba36b7c19269939 155 Gene3D G3DSA:3.40.50.2300 5 155 1.9E-56 T 13-10-2018 ambt_11810 2c7276c0f689260b0ba36b7c19269939 155 SMART SM00226 5 151 1.3E-50 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ambt_16160 e8a5dbef4bde578c526bf7c0f817542a 203 PIRSF PIRSF016482 5 200 3.7E-56 T 13-10-2018 IPR007445 Pilus assembly protein, PilO ambt_16160 e8a5dbef4bde578c526bf7c0f817542a 203 Gene3D G3DSA:3.30.70.60 99 198 9.4E-35 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ambt_16160 e8a5dbef4bde578c526bf7c0f817542a 203 Pfam PF04350 Pilus assembly protein, PilO 54 192 2.3E-50 T 13-10-2018 IPR007445 Pilus assembly protein, PilO ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 SUPERFAMILY SSF55073 428 533 6.28E-10 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 SMART SM00091 295 361 3.0E-9 T 13-10-2018 IPR000014 PAS domain ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 Gene3D G3DSA:3.20.20.450 603 854 3.6E-67 T 13-10-2018 IPR035919 EAL domain superfamily ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 SUPERFAMILY SSF55785 178 286 2.97E-8 T 13-10-2018 IPR035965 PAS domain superfamily ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 Gene3D G3DSA:3.30.450.20 160 229 4.7E-6 T 13-10-2018 ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 SUPERFAMILY SSF141868 606 847 4.18E-64 T 13-10-2018 IPR035919 EAL domain superfamily ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 Pfam PF00990 Diguanylate cyclase, GGDEF domain 422 534 5.9E-12 T 13-10-2018 IPR000160 GGDEF domain ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 Gene3D G3DSA:3.30.450.20 290 411 1.1E-24 T 13-10-2018 ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 SMART SM00267 411 572 0.0071 T 13-10-2018 IPR000160 GGDEF domain ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 Pfam PF00563 EAL domain 605 838 2.8E-54 T 13-10-2018 IPR001633 EAL domain ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 Gene3D G3DSA:2.10.70.100 234 285 4.5E-5 T 13-10-2018 ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 Pfam PF13426 PAS domain 307 409 1.1E-11 T 13-10-2018 IPR000014 PAS domain ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 Pfam PF13426 PAS domain 214 282 0.083 T 13-10-2018 IPR000014 PAS domain ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 SMART SM00052 599 843 2.7E-62 T 13-10-2018 IPR001633 EAL domain ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 Gene3D G3DSA:3.30.70.270 412 579 1.2E-14 T 13-10-2018 ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 295 415 9.1E-17 T 13-10-2018 IPR000014 PAS domain ambt_11500 c763a0cb6d7af08e1d3cc053eaf27705 856 SUPERFAMILY SSF55785 280 409 1.5E-19 T 13-10-2018 IPR035965 PAS domain superfamily ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 16 335 5.2E-58 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 187 205 6.3E-27 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 18 37 6.3E-27 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 287 6.3E-27 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 6.3E-27 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 300 322 6.3E-27 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 315 322 6.1E-50 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 187 212 6.1E-50 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 160 6.1E-50 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 286 6.1E-50 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 351 372 6.1E-50 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 441 461 6.1E-50 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 431 6.1E-50 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 17 39 6.1E-50 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 50 65 6.1E-50 T 13-10-2018 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 SUPERFAMILY SSF55424 354 472 7.73E-30 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 355 466 5.5E-30 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 PIRSF PIRSF000350 1 472 6.1E-73 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 Gene3D G3DSA:3.30.390.30 354 473 3.6E-32 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 11 475 62.984 T 13-10-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 Gene3D G3DSA:3.50.50.60 16 341 9.6E-96 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 Gene3D G3DSA:3.50.50.60 167 285 9.6E-96 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_00780 814a8914a6acd8bb92e73811eafc6e53 475 SUPERFAMILY SSF51905 13 332 1.53E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_15830 65eb7e48c36c2a1480c998227555880f 157 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 13-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 ambt_15830 65eb7e48c36c2a1480c998227555880f 157 Gene3D G3DSA:1.20.1260.10 1 157 3.2E-59 T 13-10-2018 IPR012347 Ferritin-like ambt_15830 65eb7e48c36c2a1480c998227555880f 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 1.1E-12 T 13-10-2018 IPR002177 DNA-binding protein Dps ambt_15830 65eb7e48c36c2a1480c998227555880f 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 1.1E-12 T 13-10-2018 IPR002177 DNA-binding protein Dps ambt_15830 65eb7e48c36c2a1480c998227555880f 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 1.1E-12 T 13-10-2018 IPR002177 DNA-binding protein Dps ambt_15830 65eb7e48c36c2a1480c998227555880f 157 Pfam PF00210 Ferritin-like domain 18 157 2.9E-32 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ambt_15830 65eb7e48c36c2a1480c998227555880f 157 PIRSF PIRSF005900 1 157 2.0E-52 T 13-10-2018 IPR002177 DNA-binding protein Dps ambt_15830 65eb7e48c36c2a1480c998227555880f 157 SUPERFAMILY SSF47240 4 156 2.75E-48 T 13-10-2018 IPR009078 Ferritin-like superfamily ambt_15830 65eb7e48c36c2a1480c998227555880f 157 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 13-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 ambt_09970 b6c72be08d2bbf94257313300dc47d64 316 Pfam PF01063 Amino-transferase class IV 32 277 1.1E-40 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ambt_09970 b6c72be08d2bbf94257313300dc47d64 316 Gene3D G3DSA:3.20.10.10 136 291 2.2E-37 T 13-10-2018 ambt_09970 b6c72be08d2bbf94257313300dc47d64 316 SUPERFAMILY SSF56752 20 281 1.57E-51 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ambt_09970 b6c72be08d2bbf94257313300dc47d64 316 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 16 277 9.0E-71 T 13-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 ambt_09970 b6c72be08d2bbf94257313300dc47d64 316 Gene3D G3DSA:3.30.470.10 10 126 3.6E-20 T 13-10-2018 ambt_11550 968ff73c984d81ebf65235d068dffa6a 352 Gene3D G3DSA:3.40.50.1820 24 176 3.0E-12 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_11550 968ff73c984d81ebf65235d068dffa6a 352 SUPERFAMILY SSF53474 35 335 3.0E-76 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_11550 968ff73c984d81ebf65235d068dffa6a 352 Pfam PF10503 Esterase PHB depolymerase 250 331 1.9E-6 T 13-10-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 ambt_11550 968ff73c984d81ebf65235d068dffa6a 352 Gene3D G3DSA:3.40.50.1820 219 337 8.1E-9 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_03740 e1ef137553d2f68cc443b6b6cc75eb26 302 TIGRFAM TIGR03814 Gln_ase: glutaminase A 5 302 1.6E-124 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ambt_03740 e1ef137553d2f68cc443b6b6cc75eb26 302 Gene3D G3DSA:3.40.710.10 1 302 1.1E-107 T 13-10-2018 ambt_03740 e1ef137553d2f68cc443b6b6cc75eb26 302 Pfam PF04960 Glutaminase 19 302 2.2E-109 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ambt_03740 e1ef137553d2f68cc443b6b6cc75eb26 302 Hamap MF_00313 Glutaminase [glsA]. 1 302 44.505 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 ambt_03740 e1ef137553d2f68cc443b6b6cc75eb26 302 SUPERFAMILY SSF56601 3 302 4.46E-110 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ambt_12190 5430af1c2edeb4b10bc7e1838ca91fa8 110 SUPERFAMILY SSF55159 8 106 1.09E-21 T 13-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 ambt_12190 5430af1c2edeb4b10bc7e1838ca91fa8 110 PIRSF PIRSF037511 1 110 2.1E-32 T 13-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 ambt_12190 5430af1c2edeb4b10bc7e1838ca91fa8 110 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 9 110 2.1E-35 T 13-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 ambt_12190 5430af1c2edeb4b10bc7e1838ca91fa8 110 Pfam PF01253 Translation initiation factor SUI1 34 103 1.1E-15 T 13-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 ambt_12190 5430af1c2edeb4b10bc7e1838ca91fa8 110 Gene3D G3DSA:3.30.780.10 30 110 2.1E-29 T 13-10-2018 ambt_09500 170cc7fd9a36acf9c37e4f136854baaf 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 1.0E-35 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 ambt_09500 170cc7fd9a36acf9c37e4f136854baaf 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 6.7E-21 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 ambt_09500 170cc7fd9a36acf9c37e4f136854baaf 97 SUPERFAMILY SSF75471 1 95 6.28E-30 T 13-10-2018 IPR035920 YhbY-like superfamily ambt_09500 170cc7fd9a36acf9c37e4f136854baaf 97 Gene3D G3DSA:3.30.110.60 1 97 3.7E-36 T 13-10-2018 IPR035920 YhbY-like superfamily ambt_09500 170cc7fd9a36acf9c37e4f136854baaf 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 96 5.0E-37 T 13-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 ambt_09500 170cc7fd9a36acf9c37e4f136854baaf 97 SMART SM01103 3 86 1.4E-40 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 ambt_11030 45e242c821edf47aaca23c99f3893c27 377 Gene3D G3DSA:3.40.630.10 10 363 4.4E-125 T 13-10-2018 ambt_11030 45e242c821edf47aaca23c99f3893c27 377 Pfam PF01546 Peptidase family M20/M25/M40 64 373 3.3E-42 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 ambt_11030 45e242c821edf47aaca23c99f3893c27 377 SUPERFAMILY SSF53187 3 376 8.75E-61 T 13-10-2018 ambt_11030 45e242c821edf47aaca23c99f3893c27 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 51.006 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 ambt_11030 45e242c821edf47aaca23c99f3893c27 377 Gene3D G3DSA:3.30.70.360 181 294 4.4E-125 T 13-10-2018 ambt_11030 45e242c821edf47aaca23c99f3893c27 377 Pfam PF07687 Peptidase dimerisation domain 177 284 3.8E-24 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain ambt_11030 45e242c821edf47aaca23c99f3893c27 377 SUPERFAMILY SSF55031 181 291 5.38E-31 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ambt_11030 45e242c821edf47aaca23c99f3893c27 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 3.7E-168 T 13-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 ambt_21655 b99d85cfc7550e748b2c1892ad1d01e0 192 SUPERFAMILY SSF89360 1 97 2.75E-23 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ambt_21655 b99d85cfc7550e748b2c1892ad1d01e0 192 Gene3D G3DSA:3.30.300.130 101 189 6.9E-18 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ambt_21655 b99d85cfc7550e748b2c1892ad1d01e0 192 SUPERFAMILY SSF117916 95 184 1.46E-21 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ambt_21655 b99d85cfc7550e748b2c1892ad1d01e0 192 Gene3D G3DSA:2.60.300.12 1 98 7.8E-16 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ambt_21655 b99d85cfc7550e748b2c1892ad1d01e0 192 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 192 3.5E-98 T 13-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 ambt_21655 b99d85cfc7550e748b2c1892ad1d01e0 192 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 180 3.0E-24 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ambt_21655 b99d85cfc7550e748b2c1892ad1d01e0 192 Pfam PF01106 NifU-like domain 111 172 4.5E-17 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ambt_21655 b99d85cfc7550e748b2c1892ad1d01e0 192 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 192 44.641 T 13-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 ambt_21655 b99d85cfc7550e748b2c1892ad1d01e0 192 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 98 8.1E-12 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 ambt_21640 80f88fb356ace374c7a630e06d8894f7 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 85 98 1.4E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_21640 80f88fb356ace374c7a630e06d8894f7 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 1.4E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_21640 80f88fb356ace374c7a630e06d8894f7 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.4E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_21640 80f88fb356ace374c7a630e06d8894f7 273 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 17 263 9.3E-73 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 ambt_21640 80f88fb356ace374c7a630e06d8894f7 273 SUPERFAMILY SSF53474 9 263 2.96E-44 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_21640 80f88fb356ace374c7a630e06d8894f7 273 Pfam PF12697 Alpha/beta hydrolase family 21 258 7.1E-20 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_21640 80f88fb356ace374c7a630e06d8894f7 273 Gene3D G3DSA:3.40.50.1820 7 266 3.7E-59 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_21640 80f88fb356ace374c7a630e06d8894f7 273 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 10 265 39.363 T 13-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 ambt_04740 d0f7fa2632458771546685e3ebca3b3b 242 Gene3D G3DSA:3.30.420.40 3 233 5.3E-67 T 13-10-2018 ambt_04740 d0f7fa2632458771546685e3ebca3b3b 242 Gene3D G3DSA:3.30.420.40 94 199 5.3E-67 T 13-10-2018 ambt_04740 d0f7fa2632458771546685e3ebca3b3b 242 Pfam PF00814 Glycoprotease family 28 185 6.2E-28 T 13-10-2018 IPR000905 Gcp-like domain ambt_04740 d0f7fa2632458771546685e3ebca3b3b 242 SUPERFAMILY SSF53067 1 102 4.06E-28 T 13-10-2018 ambt_04740 d0f7fa2632458771546685e3ebca3b3b 242 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 230 9.6E-60 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 ambt_04740 d0f7fa2632458771546685e3ebca3b3b 242 SUPERFAMILY SSF53067 115 228 3.11E-18 T 13-10-2018 ambt_00060 d58aa1eff031dd2cc60272d4f2ab4f93 205 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 195 27.033 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 ambt_00060 d58aa1eff031dd2cc60272d4f2ab4f93 205 Gene3D G3DSA:3.40.50.300 2 201 1.2E-54 T 13-10-2018 ambt_00060 d58aa1eff031dd2cc60272d4f2ab4f93 205 Pfam PF01926 50S ribosome-binding GTPase 26 144 9.4E-20 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_00060 d58aa1eff031dd2cc60272d4f2ab4f93 205 SUPERFAMILY SSF52540 14 196 3.65E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00060 d58aa1eff031dd2cc60272d4f2ab4f93 205 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 191 2.4E-71 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 ambt_07635 ae97489970c26fa3cd7455e6ae765ca3 288 Gene3D G3DSA:3.40.1090.10 87 226 3.1E-12 T 13-10-2018 ambt_07635 ae97489970c26fa3cd7455e6ae765ca3 288 Gene3D G3DSA:3.40.1090.10 1 83 2.6E-9 T 13-10-2018 ambt_07635 ae97489970c26fa3cd7455e6ae765ca3 288 SUPERFAMILY SSF52151 2 275 2.46E-39 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ambt_07635 ae97489970c26fa3cd7455e6ae765ca3 288 Pfam PF01734 Patatin-like phospholipase 125 169 4.1E-6 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ambt_07635 ae97489970c26fa3cd7455e6ae765ca3 288 Pfam PF01734 Patatin-like phospholipase 5 69 5.4E-7 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ambt_01575 07b21fa967a6cc55986d50792ae8610e 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 35.803 T 13-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 ambt_01575 07b21fa967a6cc55986d50792ae8610e 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.3E-20 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 ambt_01575 07b21fa967a6cc55986d50792ae8610e 114 Gene3D G3DSA:2.60.300.12 8 114 6.2E-33 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ambt_01575 07b21fa967a6cc55986d50792ae8610e 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 114 4.5E-38 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 ambt_01575 07b21fa967a6cc55986d50792ae8610e 114 SUPERFAMILY SSF89360 7 100 1.83E-30 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ambt_01575 07b21fa967a6cc55986d50792ae8610e 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 ambt_02820 6537fb3251f75325d8d3838daf0cc27b 903 Gene3D G3DSA:3.40.50.300 43 500 3.7E-171 T 13-10-2018 ambt_02820 6537fb3251f75325d8d3838daf0cc27b 903 Gene3D G3DSA:1.10.8.280 187 311 3.7E-171 T 13-10-2018 ambt_02820 6537fb3251f75325d8d3838daf0cc27b 903 Gene3D G3DSA:1.20.1580.10 693 732 2.7E-107 T 13-10-2018 ambt_02820 6537fb3251f75325d8d3838daf0cc27b 903 ProSitePatterns PS00211 ABC transporters family signature. 794 808 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_02820 6537fb3251f75325d8d3838daf0cc27b 903 Gene3D G3DSA:1.20.1580.10 129 399 3.7E-171 T 13-10-2018 ambt_02820 6537fb3251f75325d8d3838daf0cc27b 903 Gene3D G3DSA:3.40.50.300 639 899 2.7E-107 T 13-10-2018 ambt_02820 6537fb3251f75325d8d3838daf0cc27b 903 SUPERFAMILY SSF52540 529 878 8.63E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02820 6537fb3251f75325d8d3838daf0cc27b 903 Gene3D G3DSA:3.40.50.300 510 616 1.0E-11 T 13-10-2018 ambt_02820 6537fb3251f75325d8d3838daf0cc27b 903 SUPERFAMILY SSF52540 43 490 2.12E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02820 6537fb3251f75325d8d3838daf0cc27b 903 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_13945 6ade213317b4a4ec0e6ce06373fa5bc4 103 SUPERFAMILY SSF160544 6 84 2.35E-19 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ambt_13945 6ade213317b4a4ec0e6ce06373fa5bc4 103 Gene3D G3DSA:3.40.1690.10 5 88 3.3E-21 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ambt_13945 6ade213317b4a4ec0e6ce06373fa5bc4 103 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 80 1.2E-15 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ambt_19300 4b89b23690e2020518a36805439cad68 1111 Gene3D G3DSA:2.120.10.30 47 223 2.3E-32 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_19300 4b89b23690e2020518a36805439cad68 1111 Gene3D G3DSA:2.120.10.30 224 345 7.4E-8 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_19300 4b89b23690e2020518a36805439cad68 1111 Pfam PF01979 Amidohydrolase family 957 1063 1.8E-12 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ambt_19300 4b89b23690e2020518a36805439cad68 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 455 484 0.016 T 13-10-2018 IPR011659 WD40-like Beta Propeller ambt_19300 4b89b23690e2020518a36805439cad68 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 263 279 0.092 T 13-10-2018 IPR011659 WD40-like Beta Propeller ambt_19300 4b89b23690e2020518a36805439cad68 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 95 128 1.7E-6 T 13-10-2018 IPR011659 WD40-like Beta Propeller ambt_19300 4b89b23690e2020518a36805439cad68 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 201 218 0.045 T 13-10-2018 IPR011659 WD40-like Beta Propeller ambt_19300 4b89b23690e2020518a36805439cad68 1111 Pfam PF07676 WD40-like Beta Propeller Repeat 418 434 0.082 T 13-10-2018 IPR011659 WD40-like Beta Propeller ambt_19300 4b89b23690e2020518a36805439cad68 1111 SUPERFAMILY SSF82171 147 580 5.1E-44 T 13-10-2018 ambt_19300 4b89b23690e2020518a36805439cad68 1111 Gene3D G3DSA:3.30.110.90 735 800 7.6E-22 T 13-10-2018 ambt_19300 4b89b23690e2020518a36805439cad68 1111 Gene3D G3DSA:2.30.40.10 1040 1062 1.2E-17 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_19300 4b89b23690e2020518a36805439cad68 1111 Gene3D G3DSA:3.40.50.10910 801 813 7.6E-22 T 13-10-2018 ambt_19300 4b89b23690e2020518a36805439cad68 1111 Gene3D G3DSA:2.30.40.10 683 732 7.6E-22 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_19300 4b89b23690e2020518a36805439cad68 1111 Gene3D G3DSA:3.20.20.140 938 1039 1.2E-17 T 13-10-2018 ambt_19300 4b89b23690e2020518a36805439cad68 1111 SUPERFAMILY SSF82171 61 163 1.88E-18 T 13-10-2018 ambt_19300 4b89b23690e2020518a36805439cad68 1111 SUPERFAMILY SSF51338 676 1064 4.32E-18 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_19300 4b89b23690e2020518a36805439cad68 1111 SUPERFAMILY SSF51556 734 1029 5.9E-38 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_19300 4b89b23690e2020518a36805439cad68 1111 Gene3D G3DSA:2.120.10.30 397 629 2.1E-24 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_19650 fe8c484c480298c1fcb9a900d41db337 231 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 5.5E-55 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein ambt_19650 fe8c484c480298c1fcb9a900d41db337 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19650 fe8c484c480298c1fcb9a900d41db337 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.284 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ambt_19650 fe8c484c480298c1fcb9a900d41db337 231 PIRSF PIRSF002155 1 227 1.8E-81 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19650 fe8c484c480298c1fcb9a900d41db337 231 SUPERFAMILY SSF56808 6 225 1.31E-81 T 13-10-2018 IPR023674 Ribosomal protein L1-like ambt_19650 fe8c484c480298c1fcb9a900d41db337 231 Gene3D G3DSA:3.30.190.20 21 225 3.0E-82 T 13-10-2018 ambt_19650 fe8c484c480298c1fcb9a900d41db337 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 2.7E-106 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ambt_19650 fe8c484c480298c1fcb9a900d41db337 231 Gene3D G3DSA:3.40.50.790 68 159 3.0E-82 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 Pfam PF06689 ClpX C4-type zinc finger 14 51 2.1E-20 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 414 9.9E-211 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 SUPERFAMILY SSF57716 14 49 7.41E-12 T 13-10-2018 ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 Gene3D G3DSA:3.40.50.300 58 317 3.9E-109 T 13-10-2018 ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 417 53.291 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 SUPERFAMILY SSF52540 63 405 2.19E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 3.2E-17 T 13-10-2018 IPR019489 Clp ATPase, C-terminal ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 SMART SM00994 13 52 1.8E-24 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 312 9.0E-50 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 SMART SM01086 319 414 2.1E-34 T 13-10-2018 IPR019489 Clp ATPase, C-terminal ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 Gene3D G3DSA:3.30.50.30 3 53 1.1E-25 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 SMART SM00382 112 419 3.6E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_04065 5a5712a54d4e39aac427bff7e38a3c89 425 Gene3D G3DSA:1.10.8.60 318 425 2.6E-41 T 13-10-2018 ambt_16045 714182daf0998bbe15bf7e71a666bbdf 246 Gene3D G3DSA:1.10.10.10 146 246 5.9E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_16045 714182daf0998bbe15bf7e71a666bbdf 246 Gene3D G3DSA:3.40.50.2300 16 145 7.4E-36 T 13-10-2018 ambt_16045 714182daf0998bbe15bf7e71a666bbdf 246 SUPERFAMILY SSF52172 19 141 3.42E-39 T 13-10-2018 IPR011006 CheY-like superfamily ambt_16045 714182daf0998bbe15bf7e71a666bbdf 246 SMART SM00448 18 129 2.6E-44 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_16045 714182daf0998bbe15bf7e71a666bbdf 246 SUPERFAMILY SSF46894 148 242 2.67E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_16045 714182daf0998bbe15bf7e71a666bbdf 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 169 242 1.5E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_16045 714182daf0998bbe15bf7e71a666bbdf 246 Pfam PF00072 Response regulator receiver domain 20 130 3.4E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_16045 714182daf0998bbe15bf7e71a666bbdf 246 SMART SM00862 167 242 3.5E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_02270 32ee12ef94f7c5da28e6eb473ecf31d5 223 Gene3D G3DSA:3.40.50.300 1 221 1.6E-71 T 13-10-2018 ambt_02270 32ee12ef94f7c5da28e6eb473ecf31d5 223 SUPERFAMILY SSF52540 22 210 1.36E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02270 32ee12ef94f7c5da28e6eb473ecf31d5 223 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 20 214 27.563 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ambt_02270 32ee12ef94f7c5da28e6eb473ecf31d5 223 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 22 204 1.1E-63 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ambt_02270 32ee12ef94f7c5da28e6eb473ecf31d5 223 Pfam PF01121 Dephospho-CoA kinase 22 197 6.9E-70 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ambt_17070 0be5a2b3b3a0b4f262af92afd7b15100 239 Gene3D G3DSA:3.40.50.150 30 239 1.1E-70 T 13-10-2018 ambt_17070 0be5a2b3b3a0b4f262af92afd7b15100 239 SUPERFAMILY SSF53335 16 237 5.39E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_17070 0be5a2b3b3a0b4f262af92afd7b15100 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 237 8.3E-68 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ambt_17070 0be5a2b3b3a0b4f262af92afd7b15100 239 Pfam PF02390 Putative methyltransferase 64 233 2.6E-61 T 13-10-2018 ambt_17070 0be5a2b3b3a0b4f262af92afd7b15100 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.632 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ambt_16720 6dfedd75da9e8b02b56e991ca6618557 348 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 340 39.0 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ambt_16720 6dfedd75da9e8b02b56e991ca6618557 348 Pfam PF00072 Response regulator receiver domain 5 107 1.9E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_16720 6dfedd75da9e8b02b56e991ca6618557 348 PIRSF PIRSF000876 1 343 1.8E-128 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ambt_16720 6dfedd75da9e8b02b56e991ca6618557 348 SUPERFAMILY SSF52172 1 107 6.83E-25 T 13-10-2018 IPR011006 CheY-like superfamily ambt_16720 6dfedd75da9e8b02b56e991ca6618557 348 Gene3D G3DSA:3.40.50.180 146 343 2.4E-73 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal ambt_16720 6dfedd75da9e8b02b56e991ca6618557 348 SUPERFAMILY SSF52738 154 340 1.44E-68 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal ambt_16720 6dfedd75da9e8b02b56e991ca6618557 348 Pfam PF01339 CheB methylesterase 157 335 7.8E-59 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ambt_16720 6dfedd75da9e8b02b56e991ca6618557 348 SMART SM00448 3 122 2.9E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_16720 6dfedd75da9e8b02b56e991ca6618557 348 Gene3D G3DSA:3.40.50.2300 2 132 1.4E-25 T 13-10-2018 ambt_12535 c987c15d6d899cd3c27a9f9e6943bcc9 230 PIRSF PIRSF006102 1 219 1.9E-77 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 ambt_12535 c987c15d6d899cd3c27a9f9e6943bcc9 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 8 208 7.3E-85 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 ambt_12535 c987c15d6d899cd3c27a9f9e6943bcc9 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 2.5E-65 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 ambt_12535 c987c15d6d899cd3c27a9f9e6943bcc9 230 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.068 T 13-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 ambt_21135 04da9101c979355ff5576a050a6ca41c 264 SUPERFAMILY SSF51735 2 260 9.29E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_21135 04da9101c979355ff5576a050a6ca41c 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.6E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_21135 04da9101c979355ff5576a050a6ca41c 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.6E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_21135 04da9101c979355ff5576a050a6ca41c 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_21135 04da9101c979355ff5576a050a6ca41c 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.2E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_21135 04da9101c979355ff5576a050a6ca41c 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.2E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_21135 04da9101c979355ff5576a050a6ca41c 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.2E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_21135 04da9101c979355ff5576a050a6ca41c 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.2E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_21135 04da9101c979355ff5576a050a6ca41c 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.2E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_21135 04da9101c979355ff5576a050a6ca41c 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.2E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_21135 04da9101c979355ff5576a050a6ca41c 264 Gene3D G3DSA:3.40.50.720 1 263 2.6E-70 T 13-10-2018 ambt_21135 04da9101c979355ff5576a050a6ca41c 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 259 5.9E-42 T 13-10-2018 ambt_12125 4821af78838a243a03e582a05f07a20b 172 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 7.4E-61 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ambt_12125 4821af78838a243a03e582a05f07a20b 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 8.2E-41 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ambt_12125 4821af78838a243a03e582a05f07a20b 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 8.2E-41 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ambt_12125 4821af78838a243a03e582a05f07a20b 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 8.2E-41 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ambt_12125 4821af78838a243a03e582a05f07a20b 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 8.2E-41 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ambt_12125 4821af78838a243a03e582a05f07a20b 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 8.2E-41 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ambt_12125 4821af78838a243a03e582a05f07a20b 172 Gene3D G3DSA:3.30.420.10 1 158 2.5E-52 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_12125 4821af78838a243a03e582a05f07a20b 172 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 8.8E-68 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ambt_12125 4821af78838a243a03e582a05f07a20b 172 SUPERFAMILY SSF53098 1 155 1.48E-54 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_12125 4821af78838a243a03e582a05f07a20b 172 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 13-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 ambt_12125 4821af78838a243a03e582a05f07a20b 172 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 47.728 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ambt_10570 1a4114d561b81f53092bc4cf118f5f19 225 SUPERFAMILY SSF52540 17 191 5.31E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_10570 1a4114d561b81f53092bc4cf118f5f19 225 Gene3D G3DSA:3.40.50.300 2 214 3.3E-10 T 13-10-2018 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 67 180 3.3E-44 T 13-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 SUPERFAMILY SSF53720 1034 1217 1.7E-13 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 SUPERFAMILY SSF81935 11 182 5.1E-60 T 13-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 Gene3D G3DSA:3.40.605.10 1018 1234 1.1E-11 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 SUPERFAMILY SSF53720 559 1005 1.44E-124 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 SUPERFAMILY SSF51730 183 526 9.81E-114 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 Gene3D G3DSA:3.40.605.10 562 1007 2.3E-142 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 Gene3D G3DSA:3.40.309.10 784 976 2.3E-142 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 PIRSF PIRSF000197 2 1261 0.0 T 13-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 Gene3D G3DSA:3.20.20.220 139 518 7.7E-135 T 13-10-2018 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 519 1005 8.0E-198 T 13-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 Pfam PF00171 Aldehyde dehydrogenase family 563 1003 7.2E-116 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 Pfam PF00171 Aldehyde dehydrogenase family 1032 1214 8.5E-8 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 809 820 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ambt_15460 eca59a763c96183cb5bffbea97675cf3 1265 Pfam PF01619 Proline dehydrogenase 191 482 3.3E-95 T 13-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 ambt_16220 ade1bc34ed7aa81c7f37b09b0a28955f 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.0E-95 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ambt_16220 ade1bc34ed7aa81c7f37b09b0a28955f 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.6E-88 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ambt_16220 ade1bc34ed7aa81c7f37b09b0a28955f 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ambt_16220 ade1bc34ed7aa81c7f37b09b0a28955f 225 SUPERFAMILY SSF51366 4 218 3.25E-73 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ambt_16220 ade1bc34ed7aa81c7f37b09b0a28955f 225 PIRSF PIRSF001461 1 225 7.0E-102 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ambt_16220 ade1bc34ed7aa81c7f37b09b0a28955f 225 Gene3D G3DSA:3.20.20.70 5 222 1.4E-82 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_16220 ade1bc34ed7aa81c7f37b09b0a28955f 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ambt_16625 11d8f72ef595a7bd68eaffcabfe9ca7f 358 SUPERFAMILY SSF51658 15 328 4.98E-65 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily ambt_16625 11d8f72ef595a7bd68eaffcabfe9ca7f 358 Pfam PF07582 AP endonuclease family 2 C terminus 286 340 8.8E-21 T 13-10-2018 IPR011418 AP endonuclease, family 2, C-terminal ambt_16625 11d8f72ef595a7bd68eaffcabfe9ca7f 358 Pfam PF01261 Xylose isomerase-like TIM barrel 36 285 2.3E-38 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ambt_16625 11d8f72ef595a7bd68eaffcabfe9ca7f 358 Gene3D G3DSA:3.20.20.150 24 332 7.4E-72 T 13-10-2018 ambt_13650 e19d4c5ccaf46501a834c180e53e5055 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 254 1.8E-98 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 ambt_13650 e19d4c5ccaf46501a834c180e53e5055 256 Gene3D G3DSA:2.160.10.10 1 186 8.5E-53 T 13-10-2018 ambt_13650 e19d4c5ccaf46501a834c180e53e5055 256 Gene3D G3DSA:1.20.1180.10 191 256 2.1E-22 T 13-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 ambt_13650 e19d4c5ccaf46501a834c180e53e5055 256 PIRSF PIRSF000456 1 256 9.2E-101 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 ambt_13650 e19d4c5ccaf46501a834c180e53e5055 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 42.118 T 13-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 ambt_13650 e19d4c5ccaf46501a834c180e53e5055 256 SUPERFAMILY SSF51161 2 256 2.36E-76 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_13650 e19d4c5ccaf46501a834c180e53e5055 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 137 8.6E-6 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_13650 e19d4c5ccaf46501a834c180e53e5055 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 46 1.9E-10 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_13650 e19d4c5ccaf46501a834c180e53e5055 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 61 93 0.0016 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_13650 e19d4c5ccaf46501a834c180e53e5055 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 2.8E-25 T 13-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 ambt_19415 d29cfa05e8b5cef6ddc402202d6a1469 302 Gene3D G3DSA:3.10.129.10 146 298 2.2E-48 T 13-10-2018 ambt_19415 d29cfa05e8b5cef6ddc402202d6a1469 302 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 6.3E-43 T 13-10-2018 IPR012660 Thioesterase, putative ambt_19415 d29cfa05e8b5cef6ddc402202d6a1469 302 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 2.4E-53 T 13-10-2018 IPR012660 Thioesterase, putative ambt_19415 d29cfa05e8b5cef6ddc402202d6a1469 302 SUPERFAMILY SSF55729 2 164 1.2E-22 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_19415 d29cfa05e8b5cef6ddc402202d6a1469 302 Pfam PF00583 Acetyltransferase (GNAT) family 20 122 2.2E-11 T 13-10-2018 IPR000182 GNAT domain ambt_19415 d29cfa05e8b5cef6ddc402202d6a1469 302 Gene3D G3DSA:3.40.630.30 3 145 6.0E-22 T 13-10-2018 ambt_19415 d29cfa05e8b5cef6ddc402202d6a1469 302 SUPERFAMILY SSF54637 153 296 3.26E-42 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_18510 57c75e07fdac96f81fc8a92f94df5afc 406 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 239 4.3E-18 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ambt_18510 57c75e07fdac96f81fc8a92f94df5afc 406 SUPERFAMILY SSF47203 250 405 4.19E-43 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ambt_18510 57c75e07fdac96f81fc8a92f94df5afc 406 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 134 8.1E-16 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ambt_18510 57c75e07fdac96f81fc8a92f94df5afc 406 SUPERFAMILY SSF56645 17 264 5.76E-62 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ambt_18510 57c75e07fdac96f81fc8a92f94df5afc 406 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 399 5.1E-32 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ambt_18510 57c75e07fdac96f81fc8a92f94df5afc 406 Gene3D G3DSA:2.40.110.10 137 251 2.5E-38 T 13-10-2018 ambt_18510 57c75e07fdac96f81fc8a92f94df5afc 406 Gene3D G3DSA:1.10.540.10 1 136 1.0E-47 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ambt_18510 57c75e07fdac96f81fc8a92f94df5afc 406 Gene3D G3DSA:1.20.140.10 252 406 1.0E-37 T 13-10-2018 ambt_03985 237148ba449266c76026d1b35459ae9f 401 SUPERFAMILY SSF50998 33 369 8.63E-73 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ambt_03985 237148ba449266c76026d1b35459ae9f 401 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 400 37.914 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB ambt_03985 237148ba449266c76026d1b35459ae9f 401 Gene3D G3DSA:2.130.10.10 19 400 1.0E-91 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_03985 237148ba449266c76026d1b35459ae9f 401 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 2 398 2.0E-117 T 13-10-2018 IPR017687 Outer membrane protein assembly factor BamB ambt_03985 237148ba449266c76026d1b35459ae9f 401 Pfam PF13360 PQQ-like domain 105 323 6.0E-45 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat ambt_03985 237148ba449266c76026d1b35459ae9f 401 SMART SM00564 118 150 0.0011 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_03985 237148ba449266c76026d1b35459ae9f 401 SMART SM00564 333 365 13.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_03985 237148ba449266c76026d1b35459ae9f 401 SMART SM00564 293 324 2.6 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_03985 237148ba449266c76026d1b35459ae9f 401 SMART SM00564 60 91 0.0059 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_03985 237148ba449266c76026d1b35459ae9f 401 SMART SM00564 255 286 0.18 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_03985 237148ba449266c76026d1b35459ae9f 401 SMART SM00564 158 190 0.095 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_09900 6d14a9d62cee30078c31f4b4c3517b83 125 Pfam PF06961 Protein of unknown function (DUF1294) 39 93 1.6E-24 T 13-10-2018 IPR010718 Protein of unknown function DUF1294 ambt_14390 a34afa792f29e4777081a583b1621576 391 Gene3D G3DSA:3.40.50.1260 165 378 1.3E-152 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 Pfam PF00162 Phosphoglycerate kinase 6 378 8.3E-144 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 388 39.243 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 Gene3D G3DSA:3.40.50.1260 8 386 1.3E-152 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 SUPERFAMILY SSF53748 4 388 3.3E-147 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 PIRSF PIRSF000724 1 391 6.3E-138 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.3E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.3E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.3E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.3E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.3E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 3.3E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 3.3E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 3.3E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_14390 a34afa792f29e4777081a583b1621576 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.3E-82 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_02250 fb138c9cbd36a17ecf486db0423839da 131 PRINTS PR00502 NUDIX hydrolase family signature 46 61 2.1E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ambt_02250 fb138c9cbd36a17ecf486db0423839da 131 PRINTS PR00502 NUDIX hydrolase family signature 32 46 2.1E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ambt_02250 fb138c9cbd36a17ecf486db0423839da 131 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 4.7E-35 T 13-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 ambt_02250 fb138c9cbd36a17ecf486db0423839da 131 SUPERFAMILY SSF55811 1 126 2.44E-33 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ambt_02250 fb138c9cbd36a17ecf486db0423839da 131 Gene3D G3DSA:3.90.79.10 1 130 9.5E-34 T 13-10-2018 ambt_02250 fb138c9cbd36a17ecf486db0423839da 131 Pfam PF00293 NUDIX domain 5 117 7.1E-17 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ambt_02250 fb138c9cbd36a17ecf486db0423839da 131 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ambt_02550 be8e97d4dd48298f5563f36969d84b8c 274 Pfam PF00248 Aldo/keto reductase family 14 258 6.9E-53 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain ambt_02550 be8e97d4dd48298f5563f36969d84b8c 274 PRINTS PR00069 Aldo-keto reductase signature 89 107 5.0E-48 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_02550 be8e97d4dd48298f5563f36969d84b8c 274 PRINTS PR00069 Aldo-keto reductase signature 122 139 5.0E-48 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_02550 be8e97d4dd48298f5563f36969d84b8c 274 PRINTS PR00069 Aldo-keto reductase signature 157 186 5.0E-48 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_02550 be8e97d4dd48298f5563f36969d84b8c 274 PRINTS PR00069 Aldo-keto reductase signature 33 57 5.0E-48 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_02550 be8e97d4dd48298f5563f36969d84b8c 274 PRINTS PR00069 Aldo-keto reductase signature 194 218 5.0E-48 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_02550 be8e97d4dd48298f5563f36969d84b8c 274 Gene3D G3DSA:3.20.20.100 3 269 7.0E-91 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_02550 be8e97d4dd48298f5563f36969d84b8c 274 SUPERFAMILY SSF51430 7 268 7.2E-83 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_02550 be8e97d4dd48298f5563f36969d84b8c 274 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 122 139 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ambt_02550 be8e97d4dd48298f5563f36969d84b8c 274 PIRSF PIRSF000097 4 273 2.7E-70 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_02550 be8e97d4dd48298f5563f36969d84b8c 274 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 37 54 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ambt_05995 4983d43069a415e291bb69ce927c8990 111 Gene3D G3DSA:1.10.10.10 13 111 2.0E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_05995 4983d43069a415e291bb69ce927c8990 111 Pfam PF01022 Bacterial regulatory protein, arsR family 33 77 6.0E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_05995 4983d43069a415e291bb69ce927c8990 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 43 1.0E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_05995 4983d43069a415e291bb69ce927c8990 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 58 1.0E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_05995 4983d43069a415e291bb69ce927c8990 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 75 90 1.0E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_05995 4983d43069a415e291bb69ce927c8990 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 1.0E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_05995 4983d43069a415e291bb69ce927c8990 111 SUPERFAMILY SSF46785 18 108 8.09E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_05995 4983d43069a415e291bb69ce927c8990 111 SMART SM00418 26 104 4.8E-24 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_05340 445bd8fff1044e093a7ec3374dcd21b9 233 SUPERFAMILY SSF46785 31 156 4.3E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_02325 7b1435af0595fba09909a82efe815a53 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 3.4E-61 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ambt_02325 7b1435af0595fba09909a82efe815a53 473 Gene3D G3DSA:3.50.50.60 8 330 3.9E-118 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_02325 7b1435af0595fba09909a82efe815a53 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 454 1.9E-150 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ambt_02325 7b1435af0595fba09909a82efe815a53 473 Gene3D G3DSA:3.50.50.60 149 269 3.9E-118 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_02325 7b1435af0595fba09909a82efe815a53 473 SUPERFAMILY SSF51905 3 336 1.94E-55 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_02325 7b1435af0595fba09909a82efe815a53 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 452 1.8E-36 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 362 4.6E-71 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 4.6E-71 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 4.6E-71 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 4.6E-71 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 406 421 4.6E-71 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 4.6E-71 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 428 448 4.6E-71 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.6E-71 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 4.6E-71 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PIRSF PIRSF000350 1 467 7.1E-88 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ambt_02325 7b1435af0595fba09909a82efe815a53 473 SUPERFAMILY SSF55424 343 463 1.7E-39 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 1.7E-39 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 1.7E-39 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 1.7E-39 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.7E-39 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.7E-39 T 13-10-2018 ambt_02325 7b1435af0595fba09909a82efe815a53 473 Gene3D G3DSA:3.30.390.30 345 465 1.3E-44 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ambt_02325 7b1435af0595fba09909a82efe815a53 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ambt_06880 96e67ef5bee17141c138f04ea6f326f1 272 Pfam PF11750 Protein of unknown function (DUF3307) 7 129 1.5E-24 T 13-10-2018 IPR021737 Bacteriophage phiKZ, Orf197 ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 282 437 5.1E-37 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 Gene3D G3DSA:1.10.287.950 255 442 7.8E-43 T 13-10-2018 ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 Gene3D G3DSA:3.30.450.20 32 133 6.4E-8 T 13-10-2018 ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 Gene3D G3DSA:3.30.450.20 134 254 8.4E-20 T 13-10-2018 ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 155 267 1.8E-13 T 13-10-2018 IPR000014 PAS domain ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 Pfam PF08447 PAS fold 171 256 9.2E-11 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 SMART SM00283 252 439 3.7E-15 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 Pfam PF13426 PAS domain 38 134 2.8E-5 T 13-10-2018 IPR000014 PAS domain ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 SUPERFAMILY SSF58104 165 439 1.31E-54 T 13-10-2018 ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 SUPERFAMILY SSF55785 32 132 1.01E-8 T 13-10-2018 IPR035965 PAS domain superfamily ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 SMART SM00091 20 89 120.0 T 13-10-2018 IPR000014 PAS domain ambt_15150 6b7df1c6bd6ab3f967597d042f35681e 442 SMART SM00091 146 216 0.015 T 13-10-2018 IPR000014 PAS domain ambt_09975 31a85e5882011d1f94f219528ef4769a 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 3.0E-37 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal ambt_09975 31a85e5882011d1f94f219528ef4769a 412 PIRSF PIRSF000447 1 412 2.3E-193 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 ambt_09975 31a85e5882011d1f94f219528ef4769a 412 SUPERFAMILY SSF53901 3 252 1.99E-80 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_09975 31a85e5882011d1f94f219528ef4769a 412 Gene3D G3DSA:3.40.47.10 1 255 1.0E-94 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_09975 31a85e5882011d1f94f219528ef4769a 412 SMART SM00825 Beta-ketoacyl synthase 6 412 7.2E-15 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ambt_09975 31a85e5882011d1f94f219528ef4769a 412 SUPERFAMILY SSF53901 214 411 1.71E-70 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_09975 31a85e5882011d1f94f219528ef4769a 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 1.8E-198 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 ambt_09975 31a85e5882011d1f94f219528ef4769a 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site ambt_09975 31a85e5882011d1f94f219528ef4769a 412 Gene3D G3DSA:3.40.47.10 257 401 5.8E-53 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_09975 31a85e5882011d1f94f219528ef4769a 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 5.7E-64 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal ambt_09130 150a38c04efd8e52327a417b8aded38c 308 Gene3D G3DSA:3.40.50.1220 183 308 1.9E-58 T 13-10-2018 ambt_09130 150a38c04efd8e52327a417b8aded38c 308 Pfam PF01012 Electron transfer flavoprotein domain 3 169 1.9E-37 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ambt_09130 150a38c04efd8e52327a417b8aded38c 308 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 252 278 - T 13-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 ambt_09130 150a38c04efd8e52327a417b8aded38c 308 SMART SM00893 3 181 3.2E-52 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ambt_09130 150a38c04efd8e52327a417b8aded38c 308 SUPERFAMILY SSF52402 3 183 6.49E-57 T 13-10-2018 ambt_09130 150a38c04efd8e52327a417b8aded38c 308 Gene3D G3DSA:3.40.50.620 2 182 5.1E-58 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_09130 150a38c04efd8e52327a417b8aded38c 308 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 1.6E-36 T 13-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 ambt_09130 150a38c04efd8e52327a417b8aded38c 308 PIRSF PIRSF000089 1 308 5.4E-109 T 13-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 ambt_09130 150a38c04efd8e52327a417b8aded38c 308 SUPERFAMILY SSF52467 188 307 1.96E-48 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ambt_03165 6da724cd8e4fe5d5b805ce735c42e808 780 Pfam PF00593 TonB dependent receptor 299 778 8.1E-41 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_03165 6da724cd8e4fe5d5b805ce735c42e808 780 Gene3D G3DSA:2.170.130.10 31 160 4.3E-6 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_03165 6da724cd8e4fe5d5b805ce735c42e808 780 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 159 2.8E-6 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_03165 6da724cd8e4fe5d5b805ce735c42e808 780 SUPERFAMILY SSF56935 33 780 2.44E-78 T 13-10-2018 ambt_14605 e575a19f875005c4315fee0040a2315e 494 Gene3D G3DSA:1.10.10.1330 130 268 2.6E-22 T 13-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily ambt_14605 e575a19f875005c4315fee0040a2315e 494 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 472 479 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ambt_14605 e575a19f875005c4315fee0040a2315e 494 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 7.2E-17 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ambt_14605 e575a19f875005c4315fee0040a2315e 494 PRINTS PR00045 Sigma-54 factor signature 409 420 1.3E-29 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ambt_14605 e575a19f875005c4315fee0040a2315e 494 PRINTS PR00045 Sigma-54 factor signature 467 485 1.3E-29 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ambt_14605 e575a19f875005c4315fee0040a2315e 494 PRINTS PR00045 Sigma-54 factor signature 203 220 1.3E-29 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ambt_14605 e575a19f875005c4315fee0040a2315e 494 PRINTS PR00045 Sigma-54 factor signature 393 405 1.3E-29 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ambt_14605 e575a19f875005c4315fee0040a2315e 494 Pfam PF04552 Sigma-54, DNA binding domain 334 491 2.1E-71 T 13-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding ambt_14605 e575a19f875005c4315fee0040a2315e 494 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 491 1.4E-157 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ambt_14605 e575a19f875005c4315fee0040a2315e 494 Gene3D G3DSA:1.10.10.60 434 491 3.0E-24 T 13-10-2018 ambt_14605 e575a19f875005c4315fee0040a2315e 494 Pfam PF04963 Sigma-54 factor, core binding domain 128 320 1.7E-58 T 13-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 ambt_14605 e575a19f875005c4315fee0040a2315e 494 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 381 400 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ambt_14605 e575a19f875005c4315fee0040a2315e 494 PIRSF PIRSF000774 1 494 1.4E-152 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ambt_13635 32325bc8c4ed194ec2b4ff581fc73990 1139 SUPERFAMILY SSF89550 5 247 3.53E-10 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ambt_13635 32325bc8c4ed194ec2b4ff581fc73990 1139 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 1 1010 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_13635 32325bc8c4ed194ec2b4ff581fc73990 1139 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 275 715 5.0E-178 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_13635 32325bc8c4ed194ec2b4ff581fc73990 1139 Gene3D G3DSA:1.10.10.1600 417 494 1.0E-33 T 13-10-2018 ambt_13635 32325bc8c4ed194ec2b4ff581fc73990 1139 Pfam PF14579 Helix-hairpin-helix motif 788 877 1.5E-25 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_13635 32325bc8c4ed194ec2b4ff581fc73990 1139 Pfam PF02811 PHP domain 1 155 1.6E-35 T 13-10-2018 IPR004013 PHP domain GO:0003824 ambt_13635 32325bc8c4ed194ec2b4ff581fc73990 1139 Gene3D G3DSA:1.10.150.870 758 866 4.0E-5 T 13-10-2018 ambt_13635 32325bc8c4ed194ec2b4ff581fc73990 1139 Gene3D G3DSA:2.40.50.140 967 1053 2.1E-6 T 13-10-2018 ambt_13635 32325bc8c4ed194ec2b4ff581fc73990 1139 Gene3D G3DSA:3.20.20.140 1 254 1.7E-80 T 13-10-2018 ambt_13635 32325bc8c4ed194ec2b4ff581fc73990 1139 SMART SM00481 1 58 7.0E-9 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal ambt_00440 7299926bf47ddedc1bdfdcd083a46e0d 392 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 3.9E-38 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ambt_00440 7299926bf47ddedc1bdfdcd083a46e0d 392 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 5.7E-109 T 13-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ambt_00440 7299926bf47ddedc1bdfdcd083a46e0d 392 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 8.9E-26 T 13-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ambt_00440 7299926bf47ddedc1bdfdcd083a46e0d 392 Gene3D G3DSA:3.40.50.720 1 392 1.7E-171 T 13-10-2018 ambt_00440 7299926bf47ddedc1bdfdcd083a46e0d 392 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 53.391 T 13-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ambt_07790 3584772daa9ffdd31efffaf950a42672 295 Pfam PF01551 Peptidase family M23 192 286 3.1E-26 T 13-10-2018 IPR016047 Peptidase M23 ambt_07790 3584772daa9ffdd31efffaf950a42672 295 SUPERFAMILY SSF51261 86 288 4.71E-46 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_07790 3584772daa9ffdd31efffaf950a42672 295 Gene3D G3DSA:2.70.70.10 139 292 7.7E-40 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_02065 7e2de0268cddffb6816f2225bb8f7f45 317 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 150.837 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ambt_02065 7e2de0268cddffb6816f2225bb8f7f45 317 SUPERFAMILY SSF52440 5 123 2.62E-40 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ambt_02065 7e2de0268cddffb6816f2225bb8f7f45 317 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 296 1.1E-71 T 13-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ambt_02065 7e2de0268cddffb6816f2225bb8f7f45 317 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 5 121 1.5E-41 T 13-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ambt_02065 7e2de0268cddffb6816f2225bb8f7f45 317 Gene3D G3DSA:3.40.50.20 8 115 2.8E-112 T 13-10-2018 ambt_02065 7e2de0268cddffb6816f2225bb8f7f45 317 TIGRFAM TIGR01380 glut_syn: glutathione synthase 5 313 2.0E-125 T 13-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ambt_02065 7e2de0268cddffb6816f2225bb8f7f45 317 SUPERFAMILY SSF56059 124 314 1.01E-52 T 13-10-2018 ambt_02065 7e2de0268cddffb6816f2225bb8f7f45 317 Gene3D G3DSA:3.30.470.20 116 295 2.8E-112 T 13-10-2018 ambt_02065 7e2de0268cddffb6816f2225bb8f7f45 317 Gene3D G3DSA:3.30.1490.20 138 202 2.8E-112 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ambt_00965 a29d1fdefec5a0b9226829f29a3b061d 780 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 338 354 9.4E-10 T 13-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ambt_00965 a29d1fdefec5a0b9226829f29a3b061d 780 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 438 454 9.4E-10 T 13-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ambt_00965 a29d1fdefec5a0b9226829f29a3b061d 780 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 359 370 9.4E-10 T 13-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ambt_00965 a29d1fdefec5a0b9226829f29a3b061d 780 Gene3D G3DSA:2.60.200.20 668 779 3.3E-18 T 13-10-2018 ambt_00965 a29d1fdefec5a0b9226829f29a3b061d 780 Gene3D G3DSA:1.10.390.10 352 527 1.5E-38 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily ambt_00965 a29d1fdefec5a0b9226829f29a3b061d 780 SUPERFAMILY SSF49879 679 779 3.25E-20 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ambt_00965 a29d1fdefec5a0b9226829f29a3b061d 780 Gene3D G3DSA:3.10.170.10 235 350 2.3E-12 T 13-10-2018 ambt_00965 a29d1fdefec5a0b9226829f29a3b061d 780 Pfam PF00498 FHA domain 705 770 1.5E-13 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_00965 a29d1fdefec5a0b9226829f29a3b061d 780 SUPERFAMILY SSF55486 250 527 2.2E-39 T 13-10-2018 ambt_00965 a29d1fdefec5a0b9226829f29a3b061d 780 SMART SM00240 703 754 5.1E-12 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_00965 a29d1fdefec5a0b9226829f29a3b061d 780 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 350 527 2.1E-35 T 13-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Pfam PF14882 Phage-integrase repeat unit 385 415 1.2E-9 T 13-10-2018 IPR028229 Phage-integrase repeat unit ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Pfam PF14882 Phage-integrase repeat unit 327 378 3.7E-18 T 13-10-2018 IPR028229 Phage-integrase repeat unit ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Pfam PF14882 Phage-integrase repeat unit 86 135 8.7E-18 T 13-10-2018 IPR028229 Phage-integrase repeat unit ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Pfam PF14882 Phage-integrase repeat unit 27 78 2.9E-19 T 13-10-2018 IPR028229 Phage-integrase repeat unit ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Pfam PF14882 Phage-integrase repeat unit 440 483 1.9E-4 T 13-10-2018 IPR028229 Phage-integrase repeat unit ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Pfam PF14882 Phage-integrase repeat unit 217 266 1.3E-12 T 13-10-2018 IPR028229 Phage-integrase repeat unit ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Pfam PF14882 Phage-integrase repeat unit 277 307 1.1E-6 T 13-10-2018 IPR028229 Phage-integrase repeat unit ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Pfam PF14882 Phage-integrase repeat unit 504 535 6.4E-5 T 13-10-2018 IPR028229 Phage-integrase repeat unit ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Pfam PF14882 Phage-integrase repeat unit 142 176 4.4E-9 T 13-10-2018 IPR028229 Phage-integrase repeat unit ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Pfam PF13009 Putative phage integrase 541 853 1.2E-95 T 13-10-2018 IPR024965 Putative phage integrase ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Pfam PF00589 Phage integrase family 935 985 2.0E-5 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 SUPERFAMILY SSF56349 936 984 4.12E-6 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_21605 a5256693eb8832ed5c13c57d6d4827d3 1343 Gene3D G3DSA:1.10.443.10 780 1007 1.0E-5 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_13615 7a89caac21191878bf5cfe9f93274dbe 655 Pfam PF02080 TrkA-C domain 584 651 8.6E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ambt_13615 7a89caac21191878bf5cfe9f93274dbe 655 SUPERFAMILY SSF116726 577 649 9.02E-11 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_13615 7a89caac21191878bf5cfe9f93274dbe 655 Pfam PF00999 Sodium/hydrogen exchanger family 9 373 3.7E-63 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ambt_13615 7a89caac21191878bf5cfe9f93274dbe 655 Gene3D G3DSA:1.20.1530.20 3 387 9.0E-82 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily ambt_13615 7a89caac21191878bf5cfe9f93274dbe 655 SUPERFAMILY SSF51735 403 546 8.4E-29 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_13615 7a89caac21191878bf5cfe9f93274dbe 655 Pfam PF02254 TrkA-N domain 407 520 7.1E-21 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ambt_13615 7a89caac21191878bf5cfe9f93274dbe 655 Gene3D G3DSA:3.40.50.720 401 562 3.2E-31 T 13-10-2018 ambt_13615 7a89caac21191878bf5cfe9f93274dbe 655 Gene3D G3DSA:3.30.70.1450 580 653 1.6E-9 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_21375 55e1e27b0a221bf51554bfb91cda13ae 312 Pfam PF11356 Type II secretion system protein C 28 169 8.5E-42 T 13-10-2018 IPR024961 Type II secretion system protein C, N-terminal ambt_21375 55e1e27b0a221bf51554bfb91cda13ae 312 Gene3D G3DSA:2.30.30.830 103 170 6.4E-27 T 13-10-2018 ambt_21375 55e1e27b0a221bf51554bfb91cda13ae 312 SUPERFAMILY SSF50156 215 305 1.45E-16 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 ambt_21375 55e1e27b0a221bf51554bfb91cda13ae 312 Gene3D G3DSA:2.30.42.10 204 305 6.7E-23 T 13-10-2018 ambt_21375 55e1e27b0a221bf51554bfb91cda13ae 312 Pfam PF13180 PDZ domain 251 302 9.7E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_21375 55e1e27b0a221bf51554bfb91cda13ae 312 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 26 305 2.0E-57 T 13-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 ambt_10140 d26c1976e2e0884eca88f758d2ea0f9e 408 Pfam PF02687 FtsX-like permease family 298 403 1.5E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ambt_10140 d26c1976e2e0884eca88f758d2ea0f9e 408 Pfam PF12704 MacB-like periplasmic core domain 29 190 3.3E-8 T 13-10-2018 IPR025857 MacB-like periplasmic core domain ambt_10140 d26c1976e2e0884eca88f758d2ea0f9e 408 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 407 4.8E-118 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 ambt_21260 302e1521a91d1e71b439905ad93880b6 544 Pfam PF13193 AMP-binding enzyme C-terminal domain 452 529 1.1E-15 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ambt_21260 302e1521a91d1e71b439905ad93880b6 544 SUPERFAMILY SSF56801 4 541 2.88E-131 T 13-10-2018 ambt_21260 302e1521a91d1e71b439905ad93880b6 544 TIGRFAM TIGR03098 ligase_PEP_1: acyl-CoA ligase (AMP-forming), exosortase A-associated 9 537 2.9E-202 T 13-10-2018 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated ambt_21260 302e1521a91d1e71b439905ad93880b6 544 Pfam PF00501 AMP-binding enzyme 15 443 5.9E-86 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ambt_21260 302e1521a91d1e71b439905ad93880b6 544 Gene3D G3DSA:3.30.300.30 437 541 8.6E-24 T 13-10-2018 ambt_21260 302e1521a91d1e71b439905ad93880b6 544 Gene3D G3DSA:3.40.50.12780 4 436 1.4E-95 T 13-10-2018 ambt_21260 302e1521a91d1e71b439905ad93880b6 544 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 13-10-2018 IPR020845 AMP-binding, conserved site ambt_08870 b2e0ae26f4648384e65be7ee7eb461b9 163 Gene3D G3DSA:3.40.30.10 28 158 3.3E-23 T 13-10-2018 ambt_08870 b2e0ae26f4648384e65be7ee7eb461b9 163 Pfam PF00578 AhpC/TSA family 35 140 1.1E-9 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ambt_08870 b2e0ae26f4648384e65be7ee7eb461b9 163 SUPERFAMILY SSF52833 33 156 8.27E-24 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_08870 b2e0ae26f4648384e65be7ee7eb461b9 163 ProSitePatterns PS00194 Thioredoxin family active site. 52 70 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ambt_14235 df372c4bb9a6057d47c0a7b73b1cebe2 340 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 8 257 3.6E-12 T 13-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 ambt_14235 df372c4bb9a6057d47c0a7b73b1cebe2 340 SUPERFAMILY SSF53067 148 333 5.65E-27 T 13-10-2018 ambt_14235 df372c4bb9a6057d47c0a7b73b1cebe2 340 SUPERFAMILY SSF53067 4 61 1.3E-11 T 13-10-2018 ambt_05505 d11fa4ff6cb59579d4f3ae4e715bdda2 379 SUPERFAMILY SSF51905 116 367 5.18E-16 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_05505 d11fa4ff6cb59579d4f3ae4e715bdda2 379 Gene3D G3DSA:3.40.50.720 120 307 4.3E-38 T 13-10-2018 ambt_05505 d11fa4ff6cb59579d4f3ae4e715bdda2 379 Pfam PF01266 FAD dependent oxidoreductase 119 376 1.3E-15 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ambt_05505 d11fa4ff6cb59579d4f3ae4e715bdda2 379 Gene3D G3DSA:3.30.9.10 202 377 4.3E-38 T 13-10-2018 ambt_05505 d11fa4ff6cb59579d4f3ae4e715bdda2 379 Gene3D G3DSA:3.40.50.720 54 119 2.9E-8 T 13-10-2018 ambt_19700 98c131d5db6320b50ae8c3e1ebb234b6 460 SUPERFAMILY SSF52540 74 358 1.45E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19700 98c131d5db6320b50ae8c3e1ebb234b6 460 Pfam PF03880 DbpA RNA binding domain 390 458 8.3E-22 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain ambt_19700 98c131d5db6320b50ae8c3e1ebb234b6 460 SMART SM00487 23 221 4.5E-58 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_19700 98c131d5db6320b50ae8c3e1ebb234b6 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ambt_19700 98c131d5db6320b50ae8c3e1ebb234b6 460 Gene3D G3DSA:3.30.70.330 388 460 2.9E-20 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ambt_19700 98c131d5db6320b50ae8c3e1ebb234b6 460 Gene3D G3DSA:3.40.50.300 1 217 2.4E-69 T 13-10-2018 ambt_19700 98c131d5db6320b50ae8c3e1ebb234b6 460 SMART SM00490 257 338 1.3E-24 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_19700 98c131d5db6320b50ae8c3e1ebb234b6 460 Pfam PF00271 Helicase conserved C-terminal domain 231 338 6.4E-26 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_19700 98c131d5db6320b50ae8c3e1ebb234b6 460 Pfam PF00270 DEAD/DEAH box helicase 29 194 1.1E-46 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_19700 98c131d5db6320b50ae8c3e1ebb234b6 460 Gene3D G3DSA:3.40.50.300 218 369 1.1E-41 T 13-10-2018 ambt_00355 5dbb2fd9ebe9d278a0140ff39ec67be4 279 Gene3D G3DSA:2.60.120.330 1 279 1.8E-92 T 13-10-2018 IPR027443 Isopenicillin N synthase-like ambt_00355 5dbb2fd9ebe9d278a0140ff39ec67be4 279 SUPERFAMILY SSF51197 8 276 1.58E-60 T 13-10-2018 ambt_00355 5dbb2fd9ebe9d278a0140ff39ec67be4 279 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 14 94 5.6E-10 T 13-10-2018 IPR026992 Non-haem dioxygenase N-terminal domain ambt_00355 5dbb2fd9ebe9d278a0140ff39ec67be4 279 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 152 253 2.4E-15 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ambt_05080 b10e3ef850b280df4995d1f9d6b23eaa 162 Pfam PF02674 Colicin V production protein 4 141 8.4E-33 T 13-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 ambt_16170 82d06629349485f3f62a16e7a2ba5d6b 586 SMART SM00965 199 247 1.4E-7 T 13-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ambt_16170 82d06629349485f3f62a16e7a2ba5d6b 586 Pfam PF00263 Bacterial type II and III secretion system protein 424 582 5.9E-47 T 13-10-2018 IPR004846 Type II/III secretion system GO:0009306 ambt_16170 82d06629349485f3f62a16e7a2ba5d6b 586 PRINTS PR00811 Bacterial general secretion pathway protein D signature 547 565 7.4E-19 T 13-10-2018 IPR001775 GspD/PilQ family ambt_16170 82d06629349485f3f62a16e7a2ba5d6b 586 PRINTS PR00811 Bacterial general secretion pathway protein D signature 570 584 7.4E-19 T 13-10-2018 IPR001775 GspD/PilQ family ambt_16170 82d06629349485f3f62a16e7a2ba5d6b 586 PRINTS PR00811 Bacterial general secretion pathway protein D signature 337 347 7.4E-19 T 13-10-2018 IPR001775 GspD/PilQ family ambt_16170 82d06629349485f3f62a16e7a2ba5d6b 586 PRINTS PR00811 Bacterial general secretion pathway protein D signature 420 444 7.4E-19 T 13-10-2018 IPR001775 GspD/PilQ family ambt_16170 82d06629349485f3f62a16e7a2ba5d6b 586 Gene3D G3DSA:3.55.50.30 148 271 3.3E-41 T 13-10-2018 ambt_16170 82d06629349485f3f62a16e7a2ba5d6b 586 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 528 561 - T 13-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 ambt_16170 82d06629349485f3f62a16e7a2ba5d6b 586 Pfam PF03958 Bacterial type II/III secretion system short domain 275 337 2.1E-12 T 13-10-2018 IPR005644 NolW-like ambt_16170 82d06629349485f3f62a16e7a2ba5d6b 586 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 174 582 3.9E-154 T 13-10-2018 IPR013355 Type IV pilus secretin PilQ ambt_16170 82d06629349485f3f62a16e7a2ba5d6b 586 Gene3D G3DSA:3.30.1370.120 272 333 2.0E-9 T 13-10-2018 IPR038591 NolW-like superfamily ambt_03730 9d3dcd29a53c08aafbe06383188dc7e3 317 Pfam PF00072 Response regulator receiver domain 187 304 2.4E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_03730 9d3dcd29a53c08aafbe06383188dc7e3 317 PIRSF PIRSF002867 2 313 4.6E-99 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV ambt_03730 9d3dcd29a53c08aafbe06383188dc7e3 317 SMART SM00448 185 306 4.1E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_03730 9d3dcd29a53c08aafbe06383188dc7e3 317 SMART SM00260 18 159 1.1E-15 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_03730 9d3dcd29a53c08aafbe06383188dc7e3 317 Pfam PF01584 CheW-like domain 22 161 5.9E-31 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_03730 9d3dcd29a53c08aafbe06383188dc7e3 317 Gene3D G3DSA:2.30.30.40 24 153 1.1E-24 T 13-10-2018 ambt_03730 9d3dcd29a53c08aafbe06383188dc7e3 317 SUPERFAMILY SSF52172 181 313 3.42E-22 T 13-10-2018 IPR011006 CheY-like superfamily ambt_03730 9d3dcd29a53c08aafbe06383188dc7e3 317 Gene3D G3DSA:3.40.50.2300 180 313 5.5E-22 T 13-10-2018 ambt_03730 9d3dcd29a53c08aafbe06383188dc7e3 317 SUPERFAMILY SSF50341 17 162 2.35E-30 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ambt_03730 9d3dcd29a53c08aafbe06383188dc7e3 317 Gene3D G3DSA:2.40.50.180 40 159 1.1E-24 T 13-10-2018 ambt_07840 acf43380d25762d4c024fdd69317bca7 176 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 34 169 3.7E-6 T 13-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) ambt_17175 2c1cf0f1f3ac8c7369275f632850ee3f 185 SUPERFAMILY SSF54523 17 81 1.8E-8 T 13-10-2018 ambt_17175 2c1cf0f1f3ac8c7369275f632850ee3f 185 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_17175 2c1cf0f1f3ac8c7369275f632850ee3f 185 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 36 5.4E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_17175 2c1cf0f1f3ac8c7369275f632850ee3f 185 Gene3D G3DSA:3.30.700.10 17 164 1.9E-8 T 13-10-2018 ambt_17175 2c1cf0f1f3ac8c7369275f632850ee3f 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 36 1.2E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_01890 970c2617fd5adecaf148e54bf30d4758 576 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 2 568 39.696 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 ambt_01890 970c2617fd5adecaf148e54bf30d4758 576 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 10 563 4.7E-222 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 ambt_01890 970c2617fd5adecaf148e54bf30d4758 576 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 10 567 0.0 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 ambt_01890 970c2617fd5adecaf148e54bf30d4758 576 PIRSF PIRSF000719 1 572 9.0E-201 T 13-10-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 ambt_18840 e4759abd44d224c9075f2bfb2312b5bf 348 SUPERFAMILY SSF111369 69 167 4.32E-8 T 13-10-2018 ambt_18840 e4759abd44d224c9075f2bfb2312b5bf 348 Pfam PF13533 Biotin-lipoyl like 68 102 6.5E-8 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ambt_18840 e4759abd44d224c9075f2bfb2312b5bf 348 Gene3D G3DSA:1.10.287.470 100 186 2.2E-27 T 13-10-2018 ambt_18840 e4759abd44d224c9075f2bfb2312b5bf 348 Gene3D G3DSA:2.40.50.100 66 223 2.2E-27 T 13-10-2018 ambt_18840 e4759abd44d224c9075f2bfb2312b5bf 348 Gene3D G3DSA:2.40.30.170 224 300 2.2E-27 T 13-10-2018 ambt_22115 aacc4d416b4c8806badf59acf684dd3d 397 SUPERFAMILY SSF109604 147 315 6.04E-33 T 13-10-2018 ambt_22115 aacc4d416b4c8806badf59acf684dd3d 397 Pfam PF01966 HD domain 155 275 5.3E-18 T 13-10-2018 IPR006674 HD domain ambt_22115 aacc4d416b4c8806badf59acf684dd3d 397 TIGRFAM TIGR00277 HDIG: HDIG domain 154 244 2.1E-9 T 13-10-2018 IPR006675 HDIG domain ambt_22115 aacc4d416b4c8806badf59acf684dd3d 397 Pfam PF11871 Domain of unknown function (DUF3391) 2 119 1.6E-16 T 13-10-2018 IPR021812 Protein of unknown function DUF3391 ambt_22115 aacc4d416b4c8806badf59acf684dd3d 397 SMART SM00471 150 285 5.3E-9 T 13-10-2018 IPR003607 HD/PDEase domain ambt_22115 aacc4d416b4c8806badf59acf684dd3d 397 Gene3D G3DSA:1.10.3210.10 3 316 5.2E-69 T 13-10-2018 ambt_06665 61ed6dc646aab7e7af5ea4a3e3421ad3 101 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 100 22.831 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 ambt_06665 61ed6dc646aab7e7af5ea4a3e3421ad3 101 Gene3D G3DSA:3.30.1360.20 2 100 2.2E-33 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 ambt_06665 61ed6dc646aab7e7af5ea4a3e3421ad3 101 SUPERFAMILY SSF55248 3 99 6.15E-31 T 13-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 ambt_06665 61ed6dc646aab7e7af5ea4a3e3421ad3 101 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 5 98 2.4E-30 T 13-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 ambt_05125 e67a6b0adeab1ba27b8ab4552403e773 746 Pfam PF07940 Heparinase II/III-like protein 396 653 2.6E-30 T 13-10-2018 IPR012480 Heparinase II/III-like GO:0016829 ambt_05125 e67a6b0adeab1ba27b8ab4552403e773 746 Gene3D G3DSA:2.70.98.70 390 745 7.6E-102 T 13-10-2018 ambt_05125 e67a6b0adeab1ba27b8ab4552403e773 746 Pfam PF05426 Alginate lyase 93 322 1.1E-18 T 13-10-2018 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 ambt_05125 e67a6b0adeab1ba27b8ab4552403e773 746 Gene3D G3DSA:1.50.10.100 27 387 1.1E-113 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 ambt_05125 e67a6b0adeab1ba27b8ab4552403e773 746 SUPERFAMILY SSF48230 68 348 7.6E-51 T 13-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 ambt_05120 3fd96e376af5916064ebbd7fec74250b 341 SUPERFAMILY SSF50129 16 144 3.04E-32 T 13-10-2018 IPR011032 GroES-like superfamily ambt_05120 3fd96e376af5916064ebbd7fec74250b 341 SUPERFAMILY SSF51735 117 287 2.65E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_05120 3fd96e376af5916064ebbd7fec74250b 341 SMART SM00829 16 338 7.8E-10 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ambt_05120 3fd96e376af5916064ebbd7fec74250b 341 Gene3D G3DSA:3.90.180.10 25 337 3.6E-99 T 13-10-2018 ambt_05120 3fd96e376af5916064ebbd7fec74250b 341 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 341 6.4E-152 T 13-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 ambt_05120 3fd96e376af5916064ebbd7fec74250b 341 Gene3D G3DSA:3.40.50.720 128 279 3.6E-99 T 13-10-2018 ambt_05120 3fd96e376af5916064ebbd7fec74250b 341 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 154 175 - T 13-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 ambt_05120 3fd96e376af5916064ebbd7fec74250b 341 Pfam PF13602 Zinc-binding dehydrogenase 198 338 5.3E-19 T 13-10-2018 ambt_05120 3fd96e376af5916064ebbd7fec74250b 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 1.2E-9 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ambt_19020 cfa46d9ad4d9d332080e3fcfaadd821d 402 SUPERFAMILY SSF53448 13 142 4.5E-5 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_19020 cfa46d9ad4d9d332080e3fcfaadd821d 402 Pfam PF13704 Glycosyl transferase family 2 21 120 1.9E-14 T 13-10-2018 ambt_00890 389958ddaf1a573fa5a68b1f65d211ba 619 Gene3D G3DSA:3.40.50.720 406 568 4.3E-34 T 13-10-2018 ambt_00890 389958ddaf1a573fa5a68b1f65d211ba 619 Pfam PF00999 Sodium/hydrogen exchanger family 7 380 1.0E-64 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ambt_00890 389958ddaf1a573fa5a68b1f65d211ba 619 SUPERFAMILY SSF51735 408 534 1.31E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_00890 389958ddaf1a573fa5a68b1f65d211ba 619 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 10 291 2.2E-80 T 13-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 ambt_00890 389958ddaf1a573fa5a68b1f65d211ba 619 Gene3D G3DSA:1.20.1530.20 1 393 2.4E-85 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily ambt_00890 389958ddaf1a573fa5a68b1f65d211ba 619 Pfam PF02254 TrkA-N domain 410 518 2.1E-22 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ambt_21035 4f8a83ea96ca41e31f340f1b3473c16d 146 SUPERFAMILY SSF52304 1 143 8.63E-63 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ambt_21035 4f8a83ea96ca41e31f340f1b3473c16d 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 71.533 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ambt_21035 4f8a83ea96ca41e31f340f1b3473c16d 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 16 146 5.0E-41 T 13-10-2018 ambt_21035 4f8a83ea96ca41e31f340f1b3473c16d 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 6 23 - T 13-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ambt_21035 4f8a83ea96ca41e31f340f1b3473c16d 146 PIRSF PIRSF001399 1 145 1.8E-61 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ambt_21035 4f8a83ea96ca41e31f340f1b3473c16d 146 Gene3D G3DSA:3.40.50.9100 1 145 3.5E-66 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ambt_21035 4f8a83ea96ca41e31f340f1b3473c16d 146 Pfam PF01220 Dehydroquinase class II 2 138 2.7E-62 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ambt_21035 4f8a83ea96ca41e31f340f1b3473c16d 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 140 4.4E-63 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ambt_15690 0b56021bf28bbd2f2acce01ab58a38fa 219 Pfam PF03358 NADPH-dependent FMN reductase 1 151 1.6E-25 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ambt_15690 0b56021bf28bbd2f2acce01ab58a38fa 219 Gene3D G3DSA:3.40.50.360 1 216 1.7E-40 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_15690 0b56021bf28bbd2f2acce01ab58a38fa 219 SUPERFAMILY SSF52218 1 189 1.84E-33 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_02810 dbbc9be73c98c967fcccb8780b46f2fd 669 Pfam PF16124 RecQ zinc-binding 530 576 2.9E-6 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain ambt_02810 dbbc9be73c98c967fcccb8780b46f2fd 669 Pfam PF00270 DEAD/DEAH box helicase 21 181 8.9E-17 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_02810 dbbc9be73c98c967fcccb8780b46f2fd 669 Pfam PF00271 Helicase conserved C-terminal domain 217 323 8.8E-18 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_02810 dbbc9be73c98c967fcccb8780b46f2fd 669 Gene3D G3DSA:3.40.50.300 1 200 9.8E-64 T 13-10-2018 ambt_02810 dbbc9be73c98c967fcccb8780b46f2fd 669 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 346 1.7E-111 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 ambt_02810 dbbc9be73c98c967fcccb8780b46f2fd 669 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 133 142 - T 13-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site ambt_02810 dbbc9be73c98c967fcccb8780b46f2fd 669 SMART SM00490 243 324 1.1E-25 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_02810 dbbc9be73c98c967fcccb8780b46f2fd 669 Gene3D G3DSA:3.40.50.300 202 380 1.6E-44 T 13-10-2018 ambt_02810 dbbc9be73c98c967fcccb8780b46f2fd 669 SMART SM00487 14 210 2.3E-22 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_02810 dbbc9be73c98c967fcccb8780b46f2fd 669 Gene3D G3DSA:1.10.10.10 520 667 1.9E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_02810 dbbc9be73c98c967fcccb8780b46f2fd 669 SUPERFAMILY SSF52540 25 336 2.13E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 Gene3D G3DSA:1.20.58.180 215 295 1.9E-34 T 13-10-2018 ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 299 9.2E-169 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 Gene3D G3DSA:3.30.930.10 1 214 2.3E-110 T 13-10-2018 ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 290 1.9E-150 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 SUPERFAMILY SSF55681 8 290 2.84E-135 T 13-10-2018 ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 291 60.763 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 251 267 2.0E-68 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 2.0E-68 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 2.0E-68 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 2.0E-68 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 2.0E-68 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_00035 a1d47de7a0cf5787eadf2745fd1eac86 301 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 2.0E-68 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ambt_12625 af3e0ecc2b2c6994647e51f8767d31e8 853 Pfam PF00593 TonB dependent receptor 384 846 3.0E-36 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_12625 af3e0ecc2b2c6994647e51f8767d31e8 853 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 183 9.8E-21 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_12625 af3e0ecc2b2c6994647e51f8767d31e8 853 Gene3D G3DSA:2.170.130.10 42 187 2.0E-30 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_12625 af3e0ecc2b2c6994647e51f8767d31e8 853 Gene3D G3DSA:2.40.170.20 387 832 1.1E-50 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_12625 af3e0ecc2b2c6994647e51f8767d31e8 853 SUPERFAMILY SSF56935 45 845 2.59E-101 T 13-10-2018 ambt_01840 e05354e03cc68a628d2d9c92278f720c 310 PIRSF PIRSF005917 26 306 1.9E-100 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ambt_01840 e05354e03cc68a628d2d9c92278f720c 310 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 33 253 36.665 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ambt_01840 e05354e03cc68a628d2d9c92278f720c 310 Gene3D G3DSA:3.40.1010.10 25 140 6.8E-45 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ambt_01840 e05354e03cc68a628d2d9c92278f720c 310 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 111 122 - T 13-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 ambt_01840 e05354e03cc68a628d2d9c92278f720c 310 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 33 230 2.1E-27 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ambt_01840 e05354e03cc68a628d2d9c92278f720c 310 Gene3D G3DSA:3.30.950.10 141 258 1.5E-38 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ambt_01840 e05354e03cc68a628d2d9c92278f720c 310 SUPERFAMILY SSF53790 33 251 2.75E-80 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ambt_01840 e05354e03cc68a628d2d9c92278f720c 310 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 34 301 6.7E-87 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ambt_09755 18e9d0b714d39cae3ae852ac7b35d820 418 SUPERFAMILY SSF56300 134 383 4.43E-29 T 13-10-2018 ambt_09755 18e9d0b714d39cae3ae852ac7b35d820 418 Gene3D G3DSA:3.60.21.10 83 418 1.3E-76 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like ambt_15030 ecfcfb5dad23460f6235c91b6f52bce2 134 Gene3D G3DSA:3.40.190.10 18 133 5.6E-12 T 13-10-2018 ambt_15030 ecfcfb5dad23460f6235c91b6f52bce2 134 SUPERFAMILY SSF53850 14 132 1.52E-16 T 13-10-2018 ambt_04875 4abb4f14e134c58b4f80d449075383c0 202 Pfam PF13305 WHG domain 91 178 1.3E-13 T 13-10-2018 IPR025996 WHG domain ambt_04875 4abb4f14e134c58b4f80d449075383c0 202 SUPERFAMILY SSF48498 89 197 4.79E-20 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ambt_04875 4abb4f14e134c58b4f80d449075383c0 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.2E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_04875 4abb4f14e134c58b4f80d449075383c0 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.2E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_04875 4abb4f14e134c58b4f80d449075383c0 202 Gene3D G3DSA:1.10.357.10 2 201 3.9E-53 T 13-10-2018 ambt_04875 4abb4f14e134c58b4f80d449075383c0 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 5.8E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_04875 4abb4f14e134c58b4f80d449075383c0 202 SUPERFAMILY SSF46689 7 77 4.94E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_15890 25cd042003e8dcf5fba13eab574fee28 635 Pfam PF07696 7TMR-DISM extracellular 2 47 184 1.2E-24 T 13-10-2018 IPR011622 7TM-DISM receptor, extracellular domain, type 2 ambt_15890 25cd042003e8dcf5fba13eab574fee28 635 Gene3D G3DSA:3.30.70.270 454 629 3.0E-55 T 13-10-2018 ambt_15890 25cd042003e8dcf5fba13eab574fee28 635 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 464 629 4.8E-48 T 13-10-2018 IPR000160 GGDEF domain ambt_15890 25cd042003e8dcf5fba13eab574fee28 635 SMART SM00267 457 631 9.7E-64 T 13-10-2018 IPR000160 GGDEF domain ambt_15890 25cd042003e8dcf5fba13eab574fee28 635 Pfam PF07695 7TM diverse intracellular signalling 196 397 5.1E-38 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 ambt_15890 25cd042003e8dcf5fba13eab574fee28 635 SUPERFAMILY SSF55073 473 630 7.45E-45 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_15890 25cd042003e8dcf5fba13eab574fee28 635 Pfam PF00990 Diguanylate cyclase, GGDEF domain 469 627 4.9E-45 T 13-10-2018 IPR000160 GGDEF domain ambt_15890 25cd042003e8dcf5fba13eab574fee28 635 Gene3D G3DSA:2.60.40.2380 39 191 3.8E-19 T 13-10-2018 ambt_08475 db21bea79cd394d3806686284f326586 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 4.4E-20 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ambt_08475 db21bea79cd394d3806686284f326586 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 4.4E-20 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ambt_08475 db21bea79cd394d3806686284f326586 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 4.4E-20 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ambt_08475 db21bea79cd394d3806686284f326586 161 Gene3D G3DSA:1.10.10.10 3 60 2.4E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_08475 db21bea79cd394d3806686284f326586 161 SUPERFAMILY SSF46785 8 68 1.15E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_08475 db21bea79cd394d3806686284f326586 161 Pfam PF01037 Lrp/AsnC ligand binding domain 75 149 1.3E-20 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ambt_08475 db21bea79cd394d3806686284f326586 161 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 56 1.7E-20 T 13-10-2018 ambt_08475 db21bea79cd394d3806686284f326586 161 Gene3D G3DSA:3.30.70.920 61 155 2.7E-24 T 13-10-2018 ambt_08475 db21bea79cd394d3806686284f326586 161 ProSitePatterns PS00519 AsnC-type HTH domain signature. 27 53 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ambt_08475 db21bea79cd394d3806686284f326586 161 SUPERFAMILY SSF54909 71 157 1.19E-20 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel ambt_08475 db21bea79cd394d3806686284f326586 161 SMART SM00344 9 118 4.8E-48 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ambt_00455 5f65c67e4ee6aee73accdd989220b863 254 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 6 248 4.2E-78 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 ambt_00455 5f65c67e4ee6aee73accdd989220b863 254 PIRSF PIRSF009437 1 253 7.7E-86 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 ambt_00455 5f65c67e4ee6aee73accdd989220b863 254 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 251 34.556 T 13-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 ambt_00455 5f65c67e4ee6aee73accdd989220b863 254 SMART SM00900 145 241 1.4E-26 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 ambt_00455 5f65c67e4ee6aee73accdd989220b863 254 Pfam PF04205 FMN-binding domain 145 238 7.1E-13 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 SUPERFAMILY SSF55785 19 122 2.62E-13 T 13-10-2018 IPR035965 PAS domain superfamily ambt_15280 987b9b411907e8f66694f9564c9628f3 500 SUPERFAMILY SSF55781 341 498 1.18E-22 T 13-10-2018 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 Pfam PF00360 Phytochrome region 355 498 4.5E-18 T 13-10-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 Gene3D G3DSA:3.30.450.40 22 474 9.1E-115 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_15280 987b9b411907e8f66694f9564c9628f3 500 Gene3D G3DSA:3.30.450.20 26 250 9.1E-115 T 13-10-2018 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 PRINTS PR01033 Phytochrome signature 247 268 9.7E-8 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 PRINTS PR01033 Phytochrome signature 461 479 9.7E-8 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 PRINTS PR01033 Phytochrome signature 164 183 9.7E-8 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 PRINTS PR01033 Phytochrome signature 430 449 9.7E-8 T 13-10-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 Pfam PF01590 GAF domain 156 301 1.5E-12 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 SUPERFAMILY SSF55781 130 307 1.96E-41 T 13-10-2018 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 Pfam PF08446 PAS fold 22 123 1.5E-8 T 13-10-2018 IPR013654 PAS fold-2 GO:0006355 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 Gene3D G3DSA:3.30.450.270 319 493 9.1E-115 T 13-10-2018 ambt_15280 987b9b411907e8f66694f9564c9628f3 500 SMART SM00065 149 319 0.0046 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 Pfam PF13932 GidA associated domain 401 616 2.4E-73 T 13-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.841 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 4.7E-281 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 Pfam PF01134 Glucose inhibited division protein A 8 399 1.7E-167 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 SUPERFAMILY SSF51905 7 261 1.9E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 SMART SM01228 546 617 1.7E-41 T 13-10-2018 ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 Gene3D G3DSA:1.10.10.1800 459 550 1.1E-27 T 13-10-2018 ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 Gene3D G3DSA:3.50.50.60 1 219 5.7E-91 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 Gene3D G3DSA:3.50.50.60 304 458 2.0E-56 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.1E-6 T 13-10-2018 ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 523 538 2.1E-6 T 13-10-2018 ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 ambt_22205 4d94d42627b376b5c4b3ab5e2c00853b 633 Gene3D G3DSA:1.10.150.570 570 622 6.1E-23 T 13-10-2018 ambt_01715 043ce945d9cf889af5a18d5807227a6b 393 Gene3D G3DSA:3.10.310.10 12 386 7.0E-148 T 13-10-2018 ambt_01715 043ce945d9cf889af5a18d5807227a6b 393 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 6 391 1.8E-218 T 13-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 ambt_01715 043ce945d9cf889af5a18d5807227a6b 393 Pfam PF04303 PrpF protein 7 389 3.1E-165 T 13-10-2018 IPR007400 PrpF protein ambt_01715 043ce945d9cf889af5a18d5807227a6b 393 SUPERFAMILY SSF54506 187 390 1.15E-75 T 13-10-2018 ambt_01715 043ce945d9cf889af5a18d5807227a6b 393 SUPERFAMILY SSF54506 4 183 1.1E-68 T 13-10-2018 ambt_01715 043ce945d9cf889af5a18d5807227a6b 393 Gene3D G3DSA:3.10.310.10 182 372 7.0E-148 T 13-10-2018 ambt_01205 6d6c278500304b4554cd7faec6649374 166 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 72 150 3.3E-8 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_01205 6d6c278500304b4554cd7faec6649374 166 Gene3D G3DSA:1.10.760.10 58 159 6.8E-13 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_01205 6d6c278500304b4554cd7faec6649374 166 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 13 154 1.3E-37 T 13-10-2018 IPR030991 Cytochrome c-550 PedF ambt_01205 6d6c278500304b4554cd7faec6649374 166 SUPERFAMILY SSF46626 5 151 4.09E-13 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_22175 c2cb081d43588912a409c3811c7f2a80 73 PRINTS PR00124 ATP synthase C subunit signature 43 68 3.4E-9 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22175 c2cb081d43588912a409c3811c7f2a80 73 PRINTS PR00124 ATP synthase C subunit signature 5 24 3.4E-9 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22175 c2cb081d43588912a409c3811c7f2a80 73 PRINTS PR00124 ATP synthase C subunit signature 26 41 3.4E-9 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22175 c2cb081d43588912a409c3811c7f2a80 73 SUPERFAMILY SSF81333 2 70 2.62E-18 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily ambt_22175 c2cb081d43588912a409c3811c7f2a80 73 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22175 c2cb081d43588912a409c3811c7f2a80 73 Pfam PF00137 ATP synthase subunit C 4 67 1.9E-11 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 ambt_22175 c2cb081d43588912a409c3811c7f2a80 73 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 14.683 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22175 c2cb081d43588912a409c3811c7f2a80 73 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 14 70 7.7E-31 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ambt_22175 c2cb081d43588912a409c3811c7f2a80 73 Gene3D G3DSA:1.20.20.10 1 72 4.4E-29 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_14425 16b89f5e75e41177bd1bf09ba52a5c92 382 Gene3D G3DSA:1.20.1090.10 181 379 1.1E-32 T 13-10-2018 ambt_14425 16b89f5e75e41177bd1bf09ba52a5c92 382 Gene3D G3DSA:3.40.50.1970 1 180 8.7E-50 T 13-10-2018 ambt_14425 16b89f5e75e41177bd1bf09ba52a5c92 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 169 197 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 ambt_14425 16b89f5e75e41177bd1bf09ba52a5c92 382 SUPERFAMILY SSF56796 3 354 1.44E-95 T 13-10-2018 ambt_14425 16b89f5e75e41177bd1bf09ba52a5c92 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 353 4.0E-81 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ambt_12920 9e8941b293b7a23220a00fafe6b561a6 132 Gene3D G3DSA:3.30.420.270 60 128 1.4E-11 T 13-10-2018 ambt_12920 9e8941b293b7a23220a00fafe6b561a6 132 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 130 9.3E-31 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 Gene3D G3DSA:1.10.8.60 305 373 2.6E-22 T 13-10-2018 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 345 354 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 Pfam PF00158 Sigma-54 interaction domain 134 299 5.5E-62 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 8.6E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 8.6E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 SUPERFAMILY SSF52540 134 365 1.15E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 SMART SM00382 154 296 1.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 158 171 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 Pfam PF00072 Response regulator receiver domain 4 112 1.6E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 Pfam PF02954 Bacterial regulatory protein, Fis family 396 436 5.8E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 SUPERFAMILY SSF52172 2 178 5.83E-28 T 13-10-2018 IPR011006 CheY-like superfamily ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 SMART SM00448 2 113 2.6E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 Gene3D G3DSA:3.40.50.300 119 304 1.5E-58 T 13-10-2018 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 Gene3D G3DSA:3.40.50.2300 3 116 4.2E-20 T 13-10-2018 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 Gene3D G3DSA:1.10.10.60 374 438 3.8E-15 T 13-10-2018 ambt_05970 12a2c68461202c1cc7b1ca739de4bb50 443 SUPERFAMILY SSF46689 343 437 2.15E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 Gene3D G3DSA:1.10.3370.10 11 425 3.0E-160 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 Pfam PF00344 SecY translocase 74 413 1.1E-116 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 SUPERFAMILY SSF103491 14 420 2.09E-133 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 ProSitePatterns PS00755 Protein secY signature 1. 74 93 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 ProSitePatterns PS00756 Protein secY signature 2. 169 186 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 18 425 1.1E-136 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 Hamap MF_01465 Protein translocase subunit SecY [secY]. 8 429 29.443 T 13-10-2018 IPR026593 Protein translocase subunit SecY ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 PIRSF PIRSF004557 10 437 2.2E-126 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 268 287 6.5E-98 T 13-10-2018 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 176 199 6.5E-98 T 13-10-2018 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 311 333 6.5E-98 T 13-10-2018 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 21 39 6.5E-98 T 13-10-2018 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 6.5E-98 T 13-10-2018 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 150 175 6.5E-98 T 13-10-2018 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 6.5E-98 T 13-10-2018 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 114 137 6.5E-98 T 13-10-2018 ambt_19070 79fea11c8dc9c612b185c162ea13ea61 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 366 384 6.5E-98 T 13-10-2018 ambt_10360 e708625c7113bdbf8d8d62f98ab011a3 459 Gene3D G3DSA:3.40.50.2000 215 398 1.7E-10 T 13-10-2018 ambt_10360 e708625c7113bdbf8d8d62f98ab011a3 459 SUPERFAMILY SSF53756 20 401 9.42E-18 T 13-10-2018 ambt_10360 e708625c7113bdbf8d8d62f98ab011a3 459 Pfam PF13692 Glycosyl transferases group 1 223 336 3.2E-16 T 13-10-2018 ambt_19985 55369d9ea0573a9d4410e264ed6d6382 132 SUPERFAMILY SSF54995 1 103 1.12E-36 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19985 55369d9ea0573a9d4410e264ed6d6382 132 Pfam PF01250 Ribosomal protein S6 3 91 7.7E-26 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19985 55369d9ea0573a9d4410e264ed6d6382 132 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 4.0E-34 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19985 55369d9ea0573a9d4410e264ed6d6382 132 Gene3D G3DSA:3.30.70.60 1 92 1.8E-31 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ambt_19985 55369d9ea0573a9d4410e264ed6d6382 132 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.734 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 ambt_09980 785d9fb90db95d599e2b4b5c2b9231a1 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 23.024 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ambt_09980 785d9fb90db95d599e2b4b5c2b9231a1 79 SUPERFAMILY SSF47336 2 76 9.03E-24 T 13-10-2018 IPR036736 ACP-like superfamily ambt_09980 785d9fb90db95d599e2b4b5c2b9231a1 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site ambt_09980 785d9fb90db95d599e2b4b5c2b9231a1 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.4E-16 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain ambt_09980 785d9fb90db95d599e2b4b5c2b9231a1 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 9.3E-37 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ambt_09980 785d9fb90db95d599e2b4b5c2b9231a1 79 Gene3D G3DSA:1.10.1200.10 1 75 7.1E-30 T 13-10-2018 IPR036736 ACP-like superfamily ambt_04710 0234e61ff0d7463185c72da7849ff9b9 293 Pfam PF01963 TraB family 30 290 2.5E-62 T 13-10-2018 IPR002816 Pheromone shutdown, TraB ambt_01880 8232c2745dc22da74f3fb4d1e7f7e77e 483 SUPERFAMILY SSF47384 253 326 1.02E-10 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_01880 8232c2745dc22da74f3fb4d1e7f7e77e 483 SMART SM00387 372 483 2.5E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_01880 8232c2745dc22da74f3fb4d1e7f7e77e 483 Gene3D G3DSA:3.30.565.10 327 483 4.2E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01880 8232c2745dc22da74f3fb4d1e7f7e77e 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 423 9.8E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01880 8232c2745dc22da74f3fb4d1e7f7e77e 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 460 9.8E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_01880 8232c2745dc22da74f3fb4d1e7f7e77e 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 372 482 4.7E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_01880 8232c2745dc22da74f3fb4d1e7f7e77e 483 SMART SM00304 215 269 1.6E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_01880 8232c2745dc22da74f3fb4d1e7f7e77e 483 SUPERFAMILY SSF55874 317 483 1.7E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01880 8232c2745dc22da74f3fb4d1e7f7e77e 483 SMART SM00388 270 328 2.7E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_01880 8232c2745dc22da74f3fb4d1e7f7e77e 483 Gene3D G3DSA:1.10.287.130 219 326 2.0E-16 T 13-10-2018 ambt_02110 c292d18e305cb65152cf67f2a6c6b800 106 Gene3D G3DSA:2.170.150.70 2 103 2.0E-6 T 13-10-2018 ambt_02110 c292d18e305cb65152cf67f2a6c6b800 106 SUPERFAMILY SSF51316 1 82 2.3E-7 T 13-10-2018 IPR011057 Mss4-like superfamily ambt_09265 7cdc84b7ae4df8fd97421ec934638c42 837 Pfam PF01370 NAD dependent epimerase/dehydratase family 23 249 4.0E-21 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ambt_09265 7cdc84b7ae4df8fd97421ec934638c42 837 Pfam PF07884 Vitamin K epoxide reductase family 533 666 2.8E-18 T 13-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 ambt_09265 7cdc84b7ae4df8fd97421ec934638c42 837 Gene3D G3DSA:1.20.1440.130 523 675 1.4E-12 T 13-10-2018 IPR038354 VKOR domain superfamily Reactome: R-HSA-6806664 ambt_09265 7cdc84b7ae4df8fd97421ec934638c42 837 SUPERFAMILY SSF51735 20 365 2.45E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_09265 7cdc84b7ae4df8fd97421ec934638c42 837 Gene3D G3DSA:3.40.50.720 5 361 1.1E-41 T 13-10-2018 ambt_19155 7cfd8baf6aceb4d75b62aeea3b7c9128 777 Gene3D G3DSA:2.40.170.20 39 407 3.1E-41 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_19155 7cfd8baf6aceb4d75b62aeea3b7c9128 777 Gene3D G3DSA:2.40.170.20 470 777 3.5E-52 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_19155 7cfd8baf6aceb4d75b62aeea3b7c9128 777 SUPERFAMILY SSF56935 27 777 9.03E-93 T 13-10-2018 ambt_19155 7cfd8baf6aceb4d75b62aeea3b7c9128 777 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 154 1.9E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_19155 7cfd8baf6aceb4d75b62aeea3b7c9128 777 Pfam PF00593 TonB dependent receptor 454 767 1.0E-28 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_08970 36b726b803431938684d04d2d813161e 411 Pfam PF00994 Probable molybdopterin binding domain 179 315 1.4E-22 T 13-10-2018 IPR001453 MoaB/Mog domain ambt_08970 36b726b803431938684d04d2d813161e 411 SUPERFAMILY SSF53218 177 320 4.19E-41 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily ambt_08970 36b726b803431938684d04d2d813161e 411 Gene3D G3DSA:3.90.105.10 25 173 1.2E-134 T 13-10-2018 ambt_08970 36b726b803431938684d04d2d813161e 411 Gene3D G3DSA:2.170.190.11 49 140 1.2E-134 T 13-10-2018 ambt_08970 36b726b803431938684d04d2d813161e 411 SUPERFAMILY SSF63882 5 174 6.15E-48 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_08970 36b726b803431938684d04d2d813161e 411 SMART SM00852 179 316 2.5E-41 T 13-10-2018 IPR001453 MoaB/Mog domain ambt_08970 36b726b803431938684d04d2d813161e 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 176 311 8.7E-30 T 13-10-2018 IPR001453 MoaB/Mog domain ambt_08970 36b726b803431938684d04d2d813161e 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 7 166 1.6E-41 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_08970 36b726b803431938684d04d2d813161e 411 Gene3D G3DSA:2.40.340.10 327 396 1.2E-134 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_08970 36b726b803431938684d04d2d813161e 411 SUPERFAMILY SSF63867 326 403 7.72E-20 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_08970 36b726b803431938684d04d2d813161e 411 Gene3D G3DSA:3.40.980.10 174 326 1.2E-134 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily ambt_08970 36b726b803431938684d04d2d813161e 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 252 285 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 ambt_08970 36b726b803431938684d04d2d813161e 411 Pfam PF03454 MoeA C-terminal region (domain IV) 331 402 5.9E-15 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ambt_09555 44f15f406ab2523a6d39fde84fdc8d05 306 SUPERFAMILY SSF110997 233 300 4.05E-11 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ambt_09555 44f15f406ab2523a6d39fde84fdc8d05 306 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 11 170 24.463 T 13-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 ambt_09555 44f15f406ab2523a6d39fde84fdc8d05 306 Gene3D G3DSA:2.40.40.10 77 171 3.8E-37 T 13-10-2018 IPR036908 RlpA-like domain superfamily ambt_09555 44f15f406ab2523a6d39fde84fdc8d05 306 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 80 283 1.9E-48 T 13-10-2018 IPR012997 Rare lipoprotein A ambt_09555 44f15f406ab2523a6d39fde84fdc8d05 306 SUPERFAMILY SSF50685 74 169 1.52E-10 T 13-10-2018 IPR036908 RlpA-like domain superfamily ambt_09555 44f15f406ab2523a6d39fde84fdc8d05 306 Pfam PF05036 Sporulation related domain 232 299 2.1E-9 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 ambt_09555 44f15f406ab2523a6d39fde84fdc8d05 306 Pfam PF03330 Lytic transglycolase 78 167 1.5E-26 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain ambt_09555 44f15f406ab2523a6d39fde84fdc8d05 306 Gene3D G3DSA:3.30.70.1070 233 303 4.1E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ambt_04110 eb57586a9c73df0dbbefce63936fdffb 294 Gene3D G3DSA:3.40.50.720 9 291 9.2E-68 T 13-10-2018 ambt_04110 eb57586a9c73df0dbbefce63936fdffb 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 4.1E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04110 eb57586a9c73df0dbbefce63936fdffb 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 101 112 4.1E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04110 eb57586a9c73df0dbbefce63936fdffb 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 4.1E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04110 eb57586a9c73df0dbbefce63936fdffb 294 SUPERFAMILY SSF51735 15 282 2.21E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_04110 eb57586a9c73df0dbbefce63936fdffb 294 Pfam PF00106 short chain dehydrogenase 20 218 5.9E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04110 eb57586a9c73df0dbbefce63936fdffb 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 3.1E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04110 eb57586a9c73df0dbbefce63936fdffb 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 3.1E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04110 eb57586a9c73df0dbbefce63936fdffb 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 3.1E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04110 eb57586a9c73df0dbbefce63936fdffb 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 3.1E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04110 eb57586a9c73df0dbbefce63936fdffb 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 3.1E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_07705 b37e72a41f23689b0a9fc78fa94d99f0 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 111 5.4E-18 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ambt_07705 b37e72a41f23689b0a9fc78fa94d99f0 137 SUPERFAMILY SSF51316 1 132 1.26E-39 T 13-10-2018 IPR011057 Mss4-like superfamily ambt_07705 b37e72a41f23689b0a9fc78fa94d99f0 137 Gene3D G3DSA:2.170.150.70 3 118 6.3E-20 T 13-10-2018 ambt_05810 6caf8dfad844334f835edb82f3a314c3 283 Gene3D G3DSA:1.10.10.10 1 79 2.0E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_05810 6caf8dfad844334f835edb82f3a314c3 283 SUPERFAMILY SSF46689 1 80 2.87E-22 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_05810 6caf8dfad844334f835edb82f3a314c3 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 3.3E-30 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 ambt_05810 6caf8dfad844334f835edb82f3a314c3 283 SUPERFAMILY SSF53697 91 277 7.08E-40 T 13-10-2018 ambt_05810 6caf8dfad844334f835edb82f3a314c3 283 Pfam PF01380 SIS domain 124 252 8.9E-24 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ambt_05810 6caf8dfad844334f835edb82f3a314c3 283 Gene3D G3DSA:3.40.50.10490 93 274 4.6E-40 T 13-10-2018 ambt_09545 52cae61adce5620d2f481b3cbffe94f4 629 Gene3D G3DSA:3.30.1390.30 86 161 2.8E-48 T 13-10-2018 ambt_09545 52cae61adce5620d2f481b3cbffe94f4 629 Gene3D G3DSA:3.90.1310.10 65 250 2.8E-48 T 13-10-2018 ambt_09545 52cae61adce5620d2f481b3cbffe94f4 629 Gene3D G3DSA:3.40.710.10 254 621 7.5E-91 T 13-10-2018 ambt_09545 52cae61adce5620d2f481b3cbffe94f4 629 SUPERFAMILY SSF56601 255 616 1.07E-93 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ambt_09545 52cae61adce5620d2f481b3cbffe94f4 629 SUPERFAMILY SSF56519 58 253 1.57E-49 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ambt_09545 52cae61adce5620d2f481b3cbffe94f4 629 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 612 1.5E-70 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ambt_09545 52cae61adce5620d2f481b3cbffe94f4 629 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 619 50.837 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ambt_09545 52cae61adce5620d2f481b3cbffe94f4 629 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 616 2.1E-230 T 13-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ambt_09545 52cae61adce5620d2f481b3cbffe94f4 629 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 240 1.7E-41 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ambt_07535 1820ccc0d4b005b21b410dfc85a91317 322 Gene3D G3DSA:1.20.1050.10 172 321 5.6E-70 T 13-10-2018 ambt_07535 1820ccc0d4b005b21b410dfc85a91317 322 SUPERFAMILY SSF47616 174 318 4.18E-37 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_07535 1820ccc0d4b005b21b410dfc85a91317 322 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 151 2.9E-21 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_07535 1820ccc0d4b005b21b410dfc85a91317 322 PIRSF PIRSF015753 5 317 4.1E-135 T 13-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 ambt_07535 1820ccc0d4b005b21b410dfc85a91317 322 Gene3D G3DSA:3.40.30.130 8 171 2.0E-61 T 13-10-2018 ambt_07535 1820ccc0d4b005b21b410dfc85a91317 322 SUPERFAMILY SSF52833 34 154 1.19E-12 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_07535 1820ccc0d4b005b21b410dfc85a91317 322 Pfam PF13410 Glutathione S-transferase, C-terminal domain 198 268 6.0E-14 T 13-10-2018 ambt_16680 f29b2a2f37cf62804cdd06645fbd4094 501 Gene3D G3DSA:1.50.10.10 11 501 5.0E-168 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 ambt_16680 f29b2a2f37cf62804cdd06645fbd4094 501 ProSitePatterns PS00928 Trehalase signature 2. 416 425 - T 13-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_16680 f29b2a2f37cf62804cdd06645fbd4094 501 SUPERFAMILY SSF48208 9 498 1.17E-141 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 ambt_16680 f29b2a2f37cf62804cdd06645fbd4094 501 ProSitePatterns PS00927 Trehalase signature 1. 120 133 - T 13-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_16680 f29b2a2f37cf62804cdd06645fbd4094 501 PRINTS PR00744 Glycosyl hydrolase family 37 signature 162 180 2.6E-36 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_16680 f29b2a2f37cf62804cdd06645fbd4094 501 PRINTS PR00744 Glycosyl hydrolase family 37 signature 345 361 2.6E-36 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_16680 f29b2a2f37cf62804cdd06645fbd4094 501 PRINTS PR00744 Glycosyl hydrolase family 37 signature 409 425 2.6E-36 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_16680 f29b2a2f37cf62804cdd06645fbd4094 501 PRINTS PR00744 Glycosyl hydrolase family 37 signature 274 291 2.6E-36 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_16680 f29b2a2f37cf62804cdd06645fbd4094 501 PRINTS PR00744 Glycosyl hydrolase family 37 signature 241 258 2.6E-36 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_16680 f29b2a2f37cf62804cdd06645fbd4094 501 PRINTS PR00744 Glycosyl hydrolase family 37 signature 486 499 2.6E-36 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_16680 f29b2a2f37cf62804cdd06645fbd4094 501 Pfam PF01204 Trehalase 29 498 9.0E-132 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_14360 19d77c703046fc092eb5251f05e5205b 524 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 258 518 2.3E-74 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 ambt_14360 19d77c703046fc092eb5251f05e5205b 524 Gene3D G3DSA:1.10.3720.10 267 521 9.3E-31 T 13-10-2018 IPR035906 MetI-like superfamily ambt_14360 19d77c703046fc092eb5251f05e5205b 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 294 519 3.7E-16 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ambt_14360 19d77c703046fc092eb5251f05e5205b 524 SUPERFAMILY SSF161098 252 509 1.28E-36 T 13-10-2018 IPR035906 MetI-like superfamily ambt_18725 ee3058878867c8968b415fbe9fc46816 358 Gene3D G3DSA:3.40.50.12580 158 271 4.4E-11 T 13-10-2018 ambt_18725 ee3058878867c8968b415fbe9fc46816 358 Gene3D G3DSA:3.40.50.11820 138 157 4.4E-11 T 13-10-2018 ambt_18725 ee3058878867c8968b415fbe9fc46816 358 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 136 355 5.5E-14 T 13-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 ambt_18725 ee3058878867c8968b415fbe9fc46816 358 SUPERFAMILY SSF53756 123 355 3.24E-11 T 13-10-2018 ambt_06495 563fb9c83a2578655225e99ce67dd43d 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 218 7.2E-65 T 13-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 ambt_06495 563fb9c83a2578655225e99ce67dd43d 230 Gene3D G3DSA:1.10.3720.10 1 221 4.1E-48 T 13-10-2018 IPR035906 MetI-like superfamily ambt_06495 563fb9c83a2578655225e99ce67dd43d 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 215 7.9E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ambt_06495 563fb9c83a2578655225e99ce67dd43d 230 SUPERFAMILY SSF161098 7 217 1.96E-43 T 13-10-2018 IPR035906 MetI-like superfamily ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 590 4.6E-34 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 590 1.3E-237 T 13-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 Gene3D G3DSA:1.20.58.100 431 549 2.0E-36 T 13-10-2018 ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 SUPERFAMILY SSF46977 454 590 8.9E-44 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 PIRSF PIRSF000171 1 582 2.6E-50 T 13-10-2018 ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 Gene3D G3DSA:4.10.80.40 550 590 4.6E-23 T 13-10-2018 ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 Gene3D G3DSA:3.90.700.10 246 350 5.4E-171 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 Pfam PF00890 FAD binding domain 9 405 3.5E-119 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 SUPERFAMILY SSF51905 4 436 1.63E-75 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 SUPERFAMILY SSF56425 236 356 5.83E-42 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 Gene3D G3DSA:3.50.50.60 9 416 5.4E-171 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_07565 7a784b2c119ebc9afadcd09a2923f32a 590 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 590 2.5E-272 T 13-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07365 023819200317e38ccdfc05a481b68883 315 SUPERFAMILY SSF51230 84 157 7.33E-11 T 13-10-2018 IPR011053 Single hybrid motif ambt_07365 023819200317e38ccdfc05a481b68883 315 Gene3D G3DSA:2.40.30.170 161 236 2.5E-31 T 13-10-2018 ambt_07365 023819200317e38ccdfc05a481b68883 315 Gene3D G3DSA:2.40.30.170 76 89 1.6E-11 T 13-10-2018 ambt_07365 023819200317e38ccdfc05a481b68883 315 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 128 207 1.7E-11 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_07365 023819200317e38ccdfc05a481b68883 315 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 76 127 1.5E-8 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_07365 023819200317e38ccdfc05a481b68883 315 Gene3D G3DSA:2.40.420.20 237 295 2.5E-31 T 13-10-2018 ambt_07365 023819200317e38ccdfc05a481b68883 315 Gene3D G3DSA:2.40.420.20 65 75 1.6E-11 T 13-10-2018 ambt_07365 023819200317e38ccdfc05a481b68883 315 Gene3D G3DSA:2.40.50.100 90 123 1.6E-11 T 13-10-2018 ambt_07365 023819200317e38ccdfc05a481b68883 315 Gene3D G3DSA:2.40.50.100 129 160 2.5E-31 T 13-10-2018 ambt_07875 e930bbdb83da9a1a0fffed7259912b13 305 SUPERFAMILY SSF53474 35 292 3.27E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_07875 e930bbdb83da9a1a0fffed7259912b13 305 Gene3D G3DSA:3.40.50.1820 34 295 7.4E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_07875 e930bbdb83da9a1a0fffed7259912b13 305 PIRSF PIRSF016521 29 291 2.9E-37 T 13-10-2018 IPR016662 Acyl-CoA thioesterase, long chain GO:0006637|GO:0016790 ambt_07875 e930bbdb83da9a1a0fffed7259912b13 305 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 119 275 3.5E-30 T 13-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 Gene3D G3DSA:2.102.10.10 36 164 2.9E-146 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 Gene3D G3DSA:3.90.380.10 22 419 2.9E-146 T 13-10-2018 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 SUPERFAMILY SSF55961 156 437 1.49E-62 T 13-10-2018 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 SUPERFAMILY SSF50022 18 154 1.57E-41 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 81 104 - T 13-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 Pfam PF00355 Rieske [2Fe-2S] domain 38 122 2.5E-18 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 23 48 1.1E-51 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 179 201 1.1E-51 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 95 115 1.1E-51 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 139 165 1.1E-51 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 53 68 1.1E-51 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 74 94 1.1E-51 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_17895 aed8e2fc943527a04ab7345bb755ccce 448 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 163 423 1.2E-33 T 13-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 ambt_13515 67d99e4b9260128115c13a692684fa36 236 SMART SM00138 4 233 8.5E-66 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_13515 67d99e4b9260128115c13a692684fa36 236 Gene3D G3DSA:3.40.50.150 35 235 1.3E-58 T 13-10-2018 ambt_13515 67d99e4b9260128115c13a692684fa36 236 Pfam PF01739 CheR methyltransferase, SAM binding domain 36 229 2.4E-62 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ambt_13515 67d99e4b9260128115c13a692684fa36 236 PRINTS PR00996 Glutamate methyltransferase family signature 192 215 1.4E-37 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_13515 67d99e4b9260128115c13a692684fa36 236 PRINTS PR00996 Glutamate methyltransferase family signature 66 86 1.4E-37 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_13515 67d99e4b9260128115c13a692684fa36 236 PRINTS PR00996 Glutamate methyltransferase family signature 104 120 1.4E-37 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_13515 67d99e4b9260128115c13a692684fa36 236 PRINTS PR00996 Glutamate methyltransferase family signature 173 187 1.4E-37 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_13515 67d99e4b9260128115c13a692684fa36 236 PRINTS PR00996 Glutamate methyltransferase family signature 29 41 1.4E-37 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_13515 67d99e4b9260128115c13a692684fa36 236 SUPERFAMILY SSF53335 36 229 6.13E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_10600 77af76024855d574a0b6b4bf525dac70 297 SUPERFAMILY SSF52540 9 238 1.44E-18 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_10600 77af76024855d574a0b6b4bf525dac70 297 Pfam PF13469 Sulfotransferase family 11 221 7.3E-10 T 13-10-2018 ambt_10600 77af76024855d574a0b6b4bf525dac70 297 Gene3D G3DSA:3.40.50.300 1 271 8.4E-17 T 13-10-2018 ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 Gene3D G3DSA:3.30.70.270 438 618 5.1E-61 T 13-10-2018 ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 SUPERFAMILY SSF55073 448 607 3.77E-48 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 SUPERFAMILY SSF55781 233 410 2.18E-20 T 13-10-2018 ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 Pfam PF00563 EAL domain 621 854 3.0E-59 T 13-10-2018 IPR001633 EAL domain ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 SMART SM00267 432 605 8.2E-63 T 13-10-2018 IPR000160 GGDEF domain ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 SMART SM00065 249 401 2.9E-7 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 SMART SM00065 51 202 0.0023 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 SMART SM00052 615 861 2.9E-59 T 13-10-2018 IPR001633 EAL domain ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 Pfam PF13185 GAF domain 52 190 7.3E-11 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 Pfam PF13185 GAF domain 254 392 2.0E-14 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 441 605 2.4E-41 T 13-10-2018 IPR000160 GGDEF domain ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 Gene3D G3DSA:3.30.450.40 224 405 8.7E-19 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 Gene3D G3DSA:3.30.450.40 25 206 1.1E-18 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 SUPERFAMILY SSF55781 35 212 4.36E-19 T 13-10-2018 ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 SUPERFAMILY SSF141868 620 857 1.31E-61 T 13-10-2018 IPR035919 EAL domain superfamily ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 Gene3D G3DSA:3.20.20.450 619 865 2.1E-65 T 13-10-2018 IPR035919 EAL domain superfamily ambt_18625 fc004e0ab31b32748acc90d6811fb09f 866 Pfam PF00990 Diguanylate cyclase, GGDEF domain 443 600 2.7E-48 T 13-10-2018 IPR000160 GGDEF domain ambt_12840 25d1be764d604380861905a0a4706bf1 77 Pfam PF03466 LysR substrate binding domain 2 75 2.5E-11 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_12840 25d1be764d604380861905a0a4706bf1 77 SUPERFAMILY SSF53850 2 75 1.79E-10 T 13-10-2018 ambt_12840 25d1be764d604380861905a0a4706bf1 77 Gene3D G3DSA:3.40.190.10 47 71 1.3E-15 T 13-10-2018 ambt_12840 25d1be764d604380861905a0a4706bf1 77 Gene3D G3DSA:3.40.190.10 3 46 1.3E-15 T 13-10-2018 ambt_05720 d402625357c193966ee776146078492b 687 SMART SM00388 196 259 2.5E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_05720 d402625357c193966ee776146078492b 687 SUPERFAMILY SSF52172 566 685 2.85E-37 T 13-10-2018 IPR011006 CheY-like superfamily ambt_05720 d402625357c193966ee776146078492b 687 SUPERFAMILY SSF47384 188 260 7.46E-19 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_05720 d402625357c193966ee776146078492b 687 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 306 419 2.2E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_05720 d402625357c193966ee776146078492b 687 Pfam PF00072 Response regulator receiver domain 439 543 4.7E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05720 d402625357c193966ee776146078492b 687 Pfam PF00072 Response regulator receiver domain 570 680 3.2E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05720 d402625357c193966ee776146078492b 687 SUPERFAMILY SSF52172 435 552 1.85E-15 T 13-10-2018 IPR011006 CheY-like superfamily ambt_05720 d402625357c193966ee776146078492b 687 SMART SM00387 306 421 9.2E-37 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_05720 d402625357c193966ee776146078492b 687 Gene3D G3DSA:3.40.50.2300 431 556 4.3E-14 T 13-10-2018 ambt_05720 d402625357c193966ee776146078492b 687 Gene3D G3DSA:3.30.565.10 258 423 2.2E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_05720 d402625357c193966ee776146078492b 687 SMART SM00448 568 680 5.1E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05720 d402625357c193966ee776146078492b 687 SMART SM00448 435 547 4.5E-6 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05720 d402625357c193966ee776146078492b 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 399 4.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05720 d402625357c193966ee776146078492b 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 374 4.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05720 d402625357c193966ee776146078492b 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 418 4.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05720 d402625357c193966ee776146078492b 687 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 360 4.7E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05720 d402625357c193966ee776146078492b 687 Gene3D G3DSA:3.40.50.12740 567 687 6.5E-41 T 13-10-2018 ambt_05720 d402625357c193966ee776146078492b 687 Gene3D G3DSA:1.10.287.130 163 257 7.2E-24 T 13-10-2018 ambt_05720 d402625357c193966ee776146078492b 687 SUPERFAMILY SSF55874 248 419 4.85E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_05720 d402625357c193966ee776146078492b 687 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 5 70 4.7E-11 T 13-10-2018 IPR029095 NarX-like, N-terminal ambt_05720 d402625357c193966ee776146078492b 687 Pfam PF00512 His Kinase A (phospho-acceptor) domain 196 259 1.7E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_06135 5d7952be0dca6153b25585a550c58568 154 Gene3D G3DSA:3.10.450.50 3 154 4.1E-15 T 13-10-2018 ambt_06135 5d7952be0dca6153b25585a550c58568 154 PIRSF PIRSF028288 1 154 9.4E-46 T 13-10-2018 IPR016878 Uncharacterised conserved protein UCP028288 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 Gene3D G3DSA:1.10.390.10 348 502 3.4E-50 T 13-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 SUPERFAMILY SSF48371 502 635 9.21E-37 T 13-10-2018 IPR016024 Armadillo-type fold ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 SUPERFAMILY SSF55486 256 495 2.78E-68 T 13-10-2018 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 Gene3D G3DSA:1.10.1740.60 251 347 9.8E-43 T 13-10-2018 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 Pfam PF01433 Peptidase family M1 domain 260 471 1.0E-52 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 335 350 2.6E-17 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 234 249 2.6E-17 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 308 318 2.6E-17 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 354 366 2.6E-17 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 189 204 2.6E-17 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 Gene3D G3DSA:2.60.40.1730 68 250 1.1E-62 T 13-10-2018 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 Gene3D G3DSA:1.25.40.320 503 641 1.7E-47 T 13-10-2018 IPR038502 Peptidase M1 LTA-4 hydrolase/aminopeptidase, C-terminal domain superfamily ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 531 634 5.6E-25 T 13-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 SUPERFAMILY SSF63737 58 251 7.59E-45 T 13-10-2018 ambt_14275 ca7b27abc0a7a58a91b93e74fe693321 643 SMART SM01263 503 642 6.6E-46 T 13-10-2018 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 ambt_13800 a344a82bd9bdce11013df9de8a05d98c 517 SUPERFAMILY SSF55073 359 513 2.67E-45 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_13800 a344a82bd9bdce11013df9de8a05d98c 517 Pfam PF00990 Diguanylate cyclase, GGDEF domain 355 510 3.7E-45 T 13-10-2018 IPR000160 GGDEF domain ambt_13800 a344a82bd9bdce11013df9de8a05d98c 517 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 353 512 1.5E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_13800 a344a82bd9bdce11013df9de8a05d98c 517 SMART SM00267 344 514 3.0E-50 T 13-10-2018 IPR000160 GGDEF domain ambt_13800 a344a82bd9bdce11013df9de8a05d98c 517 Gene3D G3DSA:3.30.70.270 350 516 5.1E-54 T 13-10-2018 ambt_13170 f1df9fc778b7a0d2c3461e99fa867c6e 163 Pfam PF01584 CheW-like domain 19 155 4.4E-42 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_13170 f1df9fc778b7a0d2c3461e99fa867c6e 163 SMART SM00260 15 152 9.8E-51 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_13170 f1df9fc778b7a0d2c3461e99fa867c6e 163 SUPERFAMILY SSF50341 12 158 6.02E-44 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ambt_13170 f1df9fc778b7a0d2c3461e99fa867c6e 163 Gene3D G3DSA:2.30.30.40 21 146 4.2E-43 T 13-10-2018 ambt_13170 f1df9fc778b7a0d2c3461e99fa867c6e 163 Gene3D G3DSA:2.40.50.180 38 147 4.2E-43 T 13-10-2018 ambt_00555 394288baa421010aeab1ee50f6a0b692 206 Gene3D G3DSA:3.40.50.720 1 205 3.0E-52 T 13-10-2018 ambt_00555 394288baa421010aeab1ee50f6a0b692 206 Pfam PF13460 NAD(P)H-binding 8 126 1.4E-10 T 13-10-2018 IPR016040 NAD(P)-binding domain ambt_00555 394288baa421010aeab1ee50f6a0b692 206 SUPERFAMILY SSF51735 1 201 1.65E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_10000 bf79889dd8395368c934bd15def6c5ef 341 Gene3D G3DSA:3.40.718.10 2 340 1.9E-125 T 13-10-2018 ambt_10000 bf79889dd8395368c934bd15def6c5ef 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 341 134.892 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 ambt_10000 bf79889dd8395368c934bd15def6c5ef 341 Pfam PF02504 Fatty acid synthesis protein 5 325 5.0E-104 T 13-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 ambt_10000 bf79889dd8395368c934bd15def6c5ef 341 SUPERFAMILY SSF53659 4 337 1.07E-105 T 13-10-2018 ambt_10000 bf79889dd8395368c934bd15def6c5ef 341 PIRSF PIRSF002465 2 340 2.9E-123 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 ambt_10000 bf79889dd8395368c934bd15def6c5ef 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 5 336 2.4E-110 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 ambt_15105 d3692cf2701eda5cedd27a886a46a3d9 323 Pfam PF01636 Phosphotransferase enzyme family 34 252 6.2E-41 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase ambt_15105 d3692cf2701eda5cedd27a886a46a3d9 323 Hamap MF_01497 Stress response kinase A [srkA]. 2 315 47.187 T 13-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 ambt_15105 d3692cf2701eda5cedd27a886a46a3d9 323 SUPERFAMILY SSF56112 5 320 8.47E-89 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_15105 d3692cf2701eda5cedd27a886a46a3d9 323 Gene3D G3DSA:1.20.1270.170 147 304 8.6E-126 T 13-10-2018 ambt_15105 d3692cf2701eda5cedd27a886a46a3d9 323 Gene3D G3DSA:1.10.510.10 58 255 8.6E-126 T 13-10-2018 ambt_15105 d3692cf2701eda5cedd27a886a46a3d9 323 Gene3D G3DSA:3.30.200.70 11 106 8.6E-126 T 13-10-2018 ambt_17985 a812e2fbebf0c2d5f1bec14d4c32602f 343 Pfam PF07883 Cupin domain 96 164 4.4E-21 T 13-10-2018 IPR013096 Cupin 2, conserved barrel ambt_17985 a812e2fbebf0c2d5f1bec14d4c32602f 343 SUPERFAMILY SSF51182 7 343 2.52E-89 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_17985 a812e2fbebf0c2d5f1bec14d4c32602f 343 Gene3D G3DSA:2.60.120.10 9 343 5.3E-99 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.0E-73 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 Gene3D G3DSA:3.90.930.12 83 177 1.0E-41 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 5.9E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.9E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 5.9E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 Gene3D G3DSA:3.90.930.12 1 82 2.4E-24 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 Pfam PF00347 Ribosomal protein L6 91 164 4.6E-22 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 Pfam PF00347 Ribosomal protein L6 14 82 2.1E-15 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 PIRSF PIRSF002162 1 177 2.1E-44 T 13-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 13-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 SUPERFAMILY SSF56053 83 177 9.55E-39 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 SUPERFAMILY SSF56053 1 82 2.16E-19 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19095 6de253e9d48ff298b9523b1b25d75d79 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.806 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.8E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 3.8E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.8E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 3.8E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 3.8E-21 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 SUPERFAMILY SSF46609 1 84 1.96E-36 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 1.3E-35 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 1.3E-34 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 SUPERFAMILY SSF54719 84 192 6.42E-40 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 Gene3D G3DSA:2.40.500.20 83 193 4.4E-40 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 Gene3D G3DSA:1.10.287.990 20 82 6.0E-27 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_12635 f13998fa53e5aa356b983c6c1040b92f 193 PIRSF PIRSF000349 1 193 5.2E-82 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ambt_00955 f37e4e1440b39b2f10b0ada501096e7e 457 Pfam PF00271 Helicase conserved C-terminal domain 230 338 5.4E-28 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_00955 f37e4e1440b39b2f10b0ada501096e7e 457 Gene3D G3DSA:3.40.50.300 212 391 1.5E-49 T 13-10-2018 ambt_00955 f37e4e1440b39b2f10b0ada501096e7e 457 SMART SM00487 20 221 3.3E-62 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_00955 f37e4e1440b39b2f10b0ada501096e7e 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ambt_00955 f37e4e1440b39b2f10b0ada501096e7e 457 SUPERFAMILY SSF52540 74 358 5.78E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00955 f37e4e1440b39b2f10b0ada501096e7e 457 SMART SM00490 257 338 3.1E-32 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_00955 f37e4e1440b39b2f10b0ada501096e7e 457 Gene3D G3DSA:3.40.50.300 1 209 9.0E-78 T 13-10-2018 ambt_00955 f37e4e1440b39b2f10b0ada501096e7e 457 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 453 49.903 T 13-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 ambt_00955 f37e4e1440b39b2f10b0ada501096e7e 457 Pfam PF00270 DEAD/DEAH box helicase 26 194 4.3E-50 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_14625 9e7e0012d1368213067545b6958c9d65 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 3 83 1.7E-26 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like ambt_14625 9e7e0012d1368213067545b6958c9d65 90 Pfam PF00381 PTS HPr component phosphorylation site 4 83 1.3E-27 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like ambt_14625 9e7e0012d1368213067545b6958c9d65 90 Gene3D G3DSA:3.30.1340.10 2 89 6.8E-30 T 13-10-2018 IPR035895 HPr-like superfamily ambt_14625 9e7e0012d1368213067545b6958c9d65 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 40 55 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site ambt_14625 9e7e0012d1368213067545b6958c9d65 90 PRINTS PR00107 Phosphocarrier protein signature 39 54 1.7E-12 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like ambt_14625 9e7e0012d1368213067545b6958c9d65 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.7E-12 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like ambt_14625 9e7e0012d1368213067545b6958c9d65 90 PRINTS PR00107 Phosphocarrier protein signature 54 71 1.7E-12 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like ambt_14625 9e7e0012d1368213067545b6958c9d65 90 SUPERFAMILY SSF55594 4 89 3.01E-28 T 13-10-2018 IPR035895 HPr-like superfamily ambt_14625 9e7e0012d1368213067545b6958c9d65 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ambt_06695 110ae5cfa38162e9e2b2c0b8c83e7306 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 4.0E-21 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ambt_06695 110ae5cfa38162e9e2b2c0b8c83e7306 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 113 23.523 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ambt_06695 110ae5cfa38162e9e2b2c0b8c83e7306 133 Pfam PF02033 Ribosome-binding factor A 7 112 2.9E-27 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ambt_06695 110ae5cfa38162e9e2b2c0b8c83e7306 133 Gene3D G3DSA:3.30.300.20 1 108 1.7E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta ambt_06695 110ae5cfa38162e9e2b2c0b8c83e7306 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 1.4E-31 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ambt_06695 110ae5cfa38162e9e2b2c0b8c83e7306 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 13-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 ambt_06695 110ae5cfa38162e9e2b2c0b8c83e7306 133 SUPERFAMILY SSF89919 3 115 1.28E-28 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily ambt_08460 86e855f07cd5f336b8b7ae1777c7a133 444 SUPERFAMILY SSF52540 12 240 4.81E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_08460 86e855f07cd5f336b8b7ae1777c7a133 444 SMART SM00382 48 164 1.7E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_08460 86e855f07cd5f336b8b7ae1777c7a133 444 Gene3D G3DSA:1.20.272.10 236 339 4.3E-42 T 13-10-2018 ambt_08460 86e855f07cd5f336b8b7ae1777c7a133 444 Gene3D G3DSA:1.10.8.60 164 235 2.4E-14 T 13-10-2018 ambt_08460 86e855f07cd5f336b8b7ae1777c7a133 444 Gene3D G3DSA:1.10.3710.10 340 441 4.5E-34 T 13-10-2018 ambt_08460 86e855f07cd5f336b8b7ae1777c7a133 444 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 52 158 9.9E-17 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_08460 86e855f07cd5f336b8b7ae1777c7a133 444 Pfam PF12002 MgsA AAA+ ATPase C terminal 262 427 8.2E-63 T 13-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal ambt_08460 86e855f07cd5f336b8b7ae1777c7a133 444 SUPERFAMILY SSF48019 246 427 1.59E-69 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ambt_08460 86e855f07cd5f336b8b7ae1777c7a133 444 Pfam PF16193 AAA C-terminal domain 187 261 4.4E-23 T 13-10-2018 IPR032423 AAA C-terminal domain ambt_08460 86e855f07cd5f336b8b7ae1777c7a133 444 Gene3D G3DSA:3.40.50.300 6 163 1.5E-45 T 13-10-2018 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 6.0E-42 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 1.2E-37 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 SUPERFAMILY SSF55979 1 118 7.12E-30 T 13-10-2018 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 5.0E-113 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 Gene3D G3DSA:3.10.150.10 1 123 1.4E-42 T 13-10-2018 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 SMART SM00480 17 362 1.7E-154 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 SUPERFAMILY SSF55979 125 244 2.66E-28 T 13-10-2018 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 SUPERFAMILY SSF55979 245 366 7.01E-39 T 13-10-2018 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 Gene3D G3DSA:3.10.150.10 125 247 1.1E-35 T 13-10-2018 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 PIRSF PIRSF000804 1 366 2.5E-121 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 Gene3D G3DSA:3.10.150.10 248 366 1.1E-41 T 13-10-2018 ambt_00010 adae9fc7c9915df6515abfa9ef605475 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 7.8E-35 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 ambt_10025 2ba87ed2622f29d4ec687b9e49d981d5 314 SUPERFAMILY SSF55174 20 71 1.32E-7 T 13-10-2018 ambt_10025 2ba87ed2622f29d4ec687b9e49d981d5 314 SUPERFAMILY SSF55120 94 313 4.16E-65 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_10025 2ba87ed2622f29d4ec687b9e49d981d5 314 Pfam PF00849 RNA pseudouridylate synthase 102 249 2.6E-32 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_10025 2ba87ed2622f29d4ec687b9e49d981d5 314 Pfam PF01479 S4 domain 21 67 8.6E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_10025 2ba87ed2622f29d4ec687b9e49d981d5 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_10025 2ba87ed2622f29d4ec687b9e49d981d5 314 Gene3D G3DSA:3.10.290.10 6 73 1.3E-14 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ambt_10025 2ba87ed2622f29d4ec687b9e49d981d5 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 313 7.0E-90 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_10025 2ba87ed2622f29d4ec687b9e49d981d5 314 SMART SM00363 21 83 1.8E-5 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_10025 2ba87ed2622f29d4ec687b9e49d981d5 314 Gene3D G3DSA:3.30.2350.10 93 314 1.8E-82 T 13-10-2018 ambt_17605 9a3404a3bac46e53ce7b467bd6549ac4 145 Pfam PF09722 Protein of unknown function (DUF2384) 91 142 4.8E-15 T 13-10-2018 IPR024467 Domain of unknown function DUF2384 ambt_17605 9a3404a3bac46e53ce7b467bd6549ac4 145 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 15 145 3.1E-40 T 13-10-2018 IPR011979 Conserved hypothetical protein CHP02293 ambt_18850 39f98f62639927d47ecde95f08b27617 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 4.3E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_18850 39f98f62639927d47ecde95f08b27617 304 Gene3D G3DSA:1.10.10.10 3 94 2.4E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_18850 39f98f62639927d47ecde95f08b27617 304 SUPERFAMILY SSF46785 2 84 1.05E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_18850 39f98f62639927d47ecde95f08b27617 304 Gene3D G3DSA:3.40.190.290 95 292 8.0E-9 T 13-10-2018 ambt_18850 39f98f62639927d47ecde95f08b27617 304 SUPERFAMILY SSF53850 94 276 6.27E-19 T 13-10-2018 ambt_20270 b9765ddc02b517fd718a38c12b4a7f76 129 Gene3D G3DSA:3.10.450.50 2 129 9.0E-22 T 13-10-2018 ambt_20270 b9765ddc02b517fd718a38c12b4a7f76 129 Pfam PF14534 Domain of unknown function (DUF4440) 4 114 1.4E-6 T 13-10-2018 IPR027843 Domain of unknown function DUF4440 ambt_20270 b9765ddc02b517fd718a38c12b4a7f76 129 SUPERFAMILY SSF54427 3 125 5.14E-14 T 13-10-2018 IPR032710 NTF2-like domain superfamily ambt_21850 4b3070ada1622116c219bab551cf3278 157 SUPERFAMILY SSF54637 8 140 5.1E-34 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_21850 4b3070ada1622116c219bab551cf3278 157 Pfam PF13279 Thioesterase-like superfamily 20 134 1.2E-14 T 13-10-2018 ambt_21850 4b3070ada1622116c219bab551cf3278 157 Gene3D G3DSA:3.10.129.10 2 142 2.2E-41 T 13-10-2018 ambt_17470 e5da3b3fb9d17c4ecdc164b2732d3464 73 Pfam PF13627 Prokaryotic lipoprotein-attachment site 18 40 5.7E-9 T 13-10-2018 IPR032831 Prokaryotic lipoprotein-attachment site ambt_08075 89e9e459aa79f6dd1c94b6b30b0393c0 355 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 23 355 4.5E-134 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ambt_08075 89e9e459aa79f6dd1c94b6b30b0393c0 355 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 99 118 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ambt_08075 89e9e459aa79f6dd1c94b6b30b0393c0 355 Gene3D G3DSA:3.20.20.70 21 355 9.7E-135 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_08075 89e9e459aa79f6dd1c94b6b30b0393c0 355 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 311 331 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ambt_08075 89e9e459aa79f6dd1c94b6b30b0393c0 355 PIRSF PIRSF000164 26 355 1.1E-100 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 ambt_08075 89e9e459aa79f6dd1c94b6b30b0393c0 355 Pfam PF01180 Dihydroorotate dehydrogenase 66 355 3.0E-92 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 ambt_08075 89e9e459aa79f6dd1c94b6b30b0393c0 355 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 21 355 48.488 T 13-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ambt_08075 89e9e459aa79f6dd1c94b6b30b0393c0 355 SUPERFAMILY SSF51395 23 355 7.33E-103 T 13-10-2018 ambt_12980 0d6de37318efca325e73a796187745ab 95 Pfam PF10719 Late competence development protein ComFB 8 83 2.3E-20 T 13-10-2018 IPR019657 Late competence development protein ComFB ambt_16555 d4ce23d82f09b2c4e56034dacdbaf95e 163 SUPERFAMILY SSF81901 41 101 3.14E-11 T 13-10-2018 ambt_16555 d4ce23d82f09b2c4e56034dacdbaf95e 163 SMART SM00671 66 101 9.0E-4 T 13-10-2018 IPR006597 Sel1-like repeat ambt_16555 d4ce23d82f09b2c4e56034dacdbaf95e 163 Gene3D G3DSA:1.25.40.10 36 145 3.2E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_16120 4fdc26997547f822e47134e2ae11c7f4 473 SUPERFAMILY SSF51905 8 225 6.6E-15 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_16120 4fdc26997547f822e47134e2ae11c7f4 473 Gene3D G3DSA:3.50.50.60 2 148 9.6E-8 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_15310 471ed20a21e02ae4632bfee58a09fca3 208 Pfam PF00293 NUDIX domain 54 177 3.5E-11 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ambt_15310 471ed20a21e02ae4632bfee58a09fca3 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 11 194 8.3E-57 T 13-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 ambt_15310 471ed20a21e02ae4632bfee58a09fca3 208 SUPERFAMILY SSF55811 9 202 4.46E-42 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ambt_15310 471ed20a21e02ae4632bfee58a09fca3 208 Gene3D G3DSA:3.90.79.10 2 206 4.3E-57 T 13-10-2018 ambt_15310 471ed20a21e02ae4632bfee58a09fca3 208 ProSitePatterns PS00893 Nudix box signature. 94 115 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 SMART SM00865 217 336 1.6E-7 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 10 181 2.7E-29 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 6 354 23.798 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 SMART SM00864 10 215 2.1E-47 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 ProSitePatterns PS00227 Tubulin subunits alpha, beta, and gamma signature. 116 122 - T 13-10-2018 IPR017975 Tubulin, conserved site GO:0005525|GO:0005874|GO:0007017 Reactome: R-HSA-380320 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 SUPERFAMILY SSF52490 10 215 2.09E-43 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 Pfam PF12327 FtsZ family, C-terminal domain 232 327 7.2E-11 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal ambt_12030 ced09eecdb8b0981928891ca778c9660 371 PRINTS PR00423 Cell division protein FtsZ signature 222 243 1.8E-18 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 PRINTS PR00423 Cell division protein FtsZ signature 108 128 1.8E-18 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 PRINTS PR00423 Cell division protein FtsZ signature 136 157 1.8E-18 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 PRINTS PR00423 Cell division protein FtsZ signature 199 221 1.8E-18 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 Gene3D G3DSA:3.40.50.1440 7 328 7.1E-76 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ambt_12030 ced09eecdb8b0981928891ca778c9660 371 SUPERFAMILY SSF55307 217 331 1.56E-19 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 ambt_21065 11421c37ef350d984a468851603a515a 710 Gene3D G3DSA:3.40.1350.10 474 535 1.6E-6 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 ambt_21065 11421c37ef350d984a468851603a515a 710 Pfam PF00929 Exonuclease 544 698 1.5E-37 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_21065 11421c37ef350d984a468851603a515a 710 SUPERFAMILY SSF53098 540 704 2.45E-55 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_21065 11421c37ef350d984a468851603a515a 710 SMART SM00479 542 707 1.0E-50 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_21065 11421c37ef350d984a468851603a515a 710 Pfam PF08774 VRR-NUC domain 468 535 1.1E-10 T 13-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 ambt_21065 11421c37ef350d984a468851603a515a 710 SMART SM00990 449 535 2.2E-13 T 13-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 ambt_21065 11421c37ef350d984a468851603a515a 710 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 542 707 1.1E-34 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_21065 11421c37ef350d984a468851603a515a 710 Gene3D G3DSA:3.30.420.10 536 706 1.1E-48 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_03905 91bee88a904919610b18db7fdfd7c9d3 161 SUPERFAMILY SSF46785 2 133 2.47E-35 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_03905 91bee88a904919610b18db7fdfd7c9d3 161 Pfam PF02082 Transcriptional regulator 1 83 1.4E-27 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type ambt_03905 91bee88a904919610b18db7fdfd7c9d3 161 Gene3D G3DSA:1.10.10.10 1 145 2.9E-54 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_03905 91bee88a904919610b18db7fdfd7c9d3 161 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 1.7E-65 T 13-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 ambt_03905 91bee88a904919610b18db7fdfd7c9d3 161 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.6E-45 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type ambt_09685 e185b29dc425ec47ab86689df970d97d 208 Gene3D G3DSA:1.10.3890.10 4 208 9.5E-74 T 13-10-2018 IPR035932 HflD-like superfamily ambt_09685 e185b29dc425ec47ab86689df970d97d 208 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 196 3.0E-59 T 13-10-2018 ambt_09685 e185b29dc425ec47ab86689df970d97d 208 Pfam PF04356 Protein of unknown function (DUF489) 8 197 9.3E-75 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD ambt_09685 e185b29dc425ec47ab86689df970d97d 208 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 205 33.565 T 13-10-2018 IPR007451 High frequency lysogenization protein HflD ambt_09685 e185b29dc425ec47ab86689df970d97d 208 SUPERFAMILY SSF101322 6 205 4.32E-71 T 13-10-2018 IPR035932 HflD-like superfamily ambt_20695 27bff562546e109245885fb6f21f941b 416 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 273 390 4.3E-28 T 13-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ambt_20695 27bff562546e109245885fb6f21f941b 416 SUPERFAMILY SSF52540 12 330 5.31E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20695 27bff562546e109245885fb6f21f941b 416 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 23 227 3.5E-56 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ambt_20695 27bff562546e109245885fb6f21f941b 416 Gene3D G3DSA:3.40.50.300 19 246 1.8E-71 T 13-10-2018 ambt_20695 27bff562546e109245885fb6f21f941b 416 SMART SM00833 273 390 9.2E-51 T 13-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 Gene3D G3DSA:2.40.30.10 25 118 7.8E-25 T 13-10-2018 ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 PRINTS PR00410 Phenol hydroxylase reductase family signature 112 121 2.8E-17 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 PRINTS PR00410 Phenol hydroxylase reductase family signature 153 162 2.8E-17 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 PRINTS PR00410 Phenol hydroxylase reductase family signature 128 147 2.8E-17 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 PRINTS PR00410 Phenol hydroxylase reductase family signature 53 65 2.8E-17 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 PRINTS PR00410 Phenol hydroxylase reductase family signature 69 76 2.8E-17 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 PRINTS PR00410 Phenol hydroxylase reductase family signature 218 226 2.8E-17 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 Pfam PF00175 Oxidoreductase NAD-binding domain 130 232 2.0E-17 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 SUPERFAMILY SSF63380 25 118 9.5E-24 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 Gene3D G3DSA:3.40.50.80 119 254 5.5E-29 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 Pfam PF00970 Oxidoreductase FAD-binding domain 29 116 1.9E-13 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ambt_18035 d3845dc45ed51b48103cf90e5af0112b 255 SUPERFAMILY SSF52343 123 251 1.57E-34 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ambt_10290 509298eca0f14017311951b24022a3dd 264 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 8.8E-52 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ambt_10290 509298eca0f14017311951b24022a3dd 264 Gene3D G3DSA:1.10.12.10 204 264 5.2E-23 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ambt_10290 509298eca0f14017311951b24022a3dd 264 SUPERFAMILY SSF52096 3 261 3.85E-72 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_10290 509298eca0f14017311951b24022a3dd 264 Gene3D G3DSA:3.90.226.10 2 203 2.1E-60 T 13-10-2018 ambt_15345 9eb932c47cec23b83966da120b0fc0cc 428 SUPERFAMILY SSF52540 217 406 2.39E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15345 9eb932c47cec23b83966da120b0fc0cc 428 Gene3D G3DSA:3.40.50.300 216 426 8.7E-65 T 13-10-2018 ambt_15345 9eb932c47cec23b83966da120b0fc0cc 428 Pfam PF13638 PIN domain 1 120 2.9E-20 T 13-10-2018 IPR002716 PIN domain ambt_15345 9eb932c47cec23b83966da120b0fc0cc 428 SUPERFAMILY SSF88723 2 122 9.22E-6 T 13-10-2018 IPR029060 PIN-like domain superfamily ambt_15345 9eb932c47cec23b83966da120b0fc0cc 428 Pfam PF02562 PhoH-like protein 218 422 3.0E-53 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 ambt_15345 9eb932c47cec23b83966da120b0fc0cc 428 Gene3D G3DSA:3.40.50.1010 1 125 1.3E-15 T 13-10-2018 ambt_03110 c779e2046bcf72ae95df7c1219557625 182 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 166 1.5E-20 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ambt_03110 c779e2046bcf72ae95df7c1219557625 182 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ambt_03110 c779e2046bcf72ae95df7c1219557625 182 Gene3D G3DSA:3.10.180.10 2 175 1.7E-61 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_03110 c779e2046bcf72ae95df7c1219557625 182 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 9 174 3.0E-51 T 13-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ambt_03110 c779e2046bcf72ae95df7c1219557625 182 SUPERFAMILY SSF54593 23 168 1.25E-33 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_11805 bfd37e6645fcdfe0ac20868f7bca3f0b 322 Gene3D G3DSA:1.10.3470.10 4 321 1.3E-77 T 13-10-2018 IPR037294 ABC transporter, BtuC-like ambt_11805 bfd37e6645fcdfe0ac20868f7bca3f0b 322 Pfam PF01032 FecCD transport family 30 318 1.9E-69 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ambt_11805 bfd37e6645fcdfe0ac20868f7bca3f0b 322 SUPERFAMILY SSF81345 12 318 4.45E-64 T 13-10-2018 IPR037294 ABC transporter, BtuC-like ambt_14295 51104a3520995b8b26ca39d1ca964d17 343 SUPERFAMILY SSF56935 3 341 4.4E-11 T 13-10-2018 ambt_19550 fcfc980803e273be76253dca146457c1 764 Pfam PF07715 TonB-dependent Receptor Plug Domain 76 175 1.4E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_19550 fcfc980803e273be76253dca146457c1 764 Pfam PF00593 TonB dependent receptor 248 762 4.7E-39 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_19550 fcfc980803e273be76253dca146457c1 764 Gene3D G3DSA:2.170.130.10 58 186 6.4E-35 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_19550 fcfc980803e273be76253dca146457c1 764 SUPERFAMILY SSF56935 74 764 5.63E-108 T 13-10-2018 ambt_19550 fcfc980803e273be76253dca146457c1 764 Gene3D G3DSA:2.40.170.20 190 764 7.8E-103 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_08220 c276f78a43db380d67afcd50bdd67867 155 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 4.2E-48 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08220 c276f78a43db380d67afcd50bdd67867 155 SUPERFAMILY SSF47240 1 155 4.79E-45 T 13-10-2018 IPR009078 Ferritin-like superfamily ambt_08220 c276f78a43db380d67afcd50bdd67867 155 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08220 c276f78a43db380d67afcd50bdd67867 155 PRINTS PR00601 Bacterioferritin signature 23 43 2.1E-47 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08220 c276f78a43db380d67afcd50bdd67867 155 PRINTS PR00601 Bacterioferritin signature 44 64 2.1E-47 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08220 c276f78a43db380d67afcd50bdd67867 155 PRINTS PR00601 Bacterioferritin signature 65 85 2.1E-47 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08220 c276f78a43db380d67afcd50bdd67867 155 PRINTS PR00601 Bacterioferritin signature 107 127 2.1E-47 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08220 c276f78a43db380d67afcd50bdd67867 155 PRINTS PR00601 Bacterioferritin signature 129 150 2.1E-47 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08220 c276f78a43db380d67afcd50bdd67867 155 PRINTS PR00601 Bacterioferritin signature 3 22 2.1E-47 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08220 c276f78a43db380d67afcd50bdd67867 155 PRINTS PR00601 Bacterioferritin signature 86 106 2.1E-47 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08220 c276f78a43db380d67afcd50bdd67867 155 PIRSF PIRSF002560 1 155 1.8E-59 T 13-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ambt_08220 c276f78a43db380d67afcd50bdd67867 155 Gene3D G3DSA:1.20.1260.10 1 155 1.1E-58 T 13-10-2018 IPR012347 Ferritin-like ambt_08220 c276f78a43db380d67afcd50bdd67867 155 Pfam PF00210 Ferritin-like domain 8 144 1.0E-35 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ambt_04450 c07de64ed04ce72a1c1e8d345b672c13 242 Gene3D G3DSA:2.60.120.10 130 221 8.5E-21 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_04450 c07de64ed04ce72a1c1e8d345b672c13 242 SUPERFAMILY SSF51182 138 228 1.51E-13 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_04450 c07de64ed04ce72a1c1e8d345b672c13 242 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 5 238 8.9E-49 T 13-10-2018 IPR012807 Anti-sigma factor ChrR, putative ambt_04450 c07de64ed04ce72a1c1e8d345b672c13 242 Pfam PF12973 ChrR Cupin-like domain 136 216 4.0E-12 T 13-10-2018 IPR025979 ChrR-like cupin domain ambt_04450 c07de64ed04ce72a1c1e8d345b672c13 242 Gene3D G3DSA:1.10.10.1320 1 128 1.6E-15 T 13-10-2018 ambt_09825 de4949f10eefdec18e637d88d614aa21 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_09825 de4949f10eefdec18e637d88d614aa21 246 SUPERFAMILY SSF51735 1 245 3.17E-70 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_09825 de4949f10eefdec18e637d88d614aa21 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 9.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09825 de4949f10eefdec18e637d88d614aa21 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 9.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09825 de4949f10eefdec18e637d88d614aa21 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 9.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09825 de4949f10eefdec18e637d88d614aa21 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 4 243 1.0E-56 T 13-10-2018 ambt_09825 de4949f10eefdec18e637d88d614aa21 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.2E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09825 de4949f10eefdec18e637d88d614aa21 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.2E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09825 de4949f10eefdec18e637d88d614aa21 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.2E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09825 de4949f10eefdec18e637d88d614aa21 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 2.2E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09825 de4949f10eefdec18e637d88d614aa21 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.2E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_09825 de4949f10eefdec18e637d88d614aa21 246 Gene3D G3DSA:3.40.50.720 1 244 3.4E-71 T 13-10-2018 ambt_17285 403564a05d204b985d966c54a952ab64 159 Pfam PF07277 SapC 7 158 1.4E-30 T 13-10-2018 IPR010836 SapC ambt_21080 73bd9b3a870203ca2d7df328617b05e3 97 Pfam PF01355 High potential iron-sulfur protein 38 93 2.6E-15 T 13-10-2018 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 ambt_21080 73bd9b3a870203ca2d7df328617b05e3 97 SUPERFAMILY SSF57652 34 95 1.7E-18 T 13-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 ambt_21080 73bd9b3a870203ca2d7df328617b05e3 97 Gene3D G3DSA:4.10.490.10 32 95 5.4E-17 T 13-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 ambt_21080 73bd9b3a870203ca2d7df328617b05e3 97 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 31 7.0E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ambt_21505 789ad2f0161d2e70824954b761bd3279 645 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_21505 789ad2f0161d2e70824954b761bd3279 645 SUPERFAMILY SSF52540 2 243 7.35E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_21505 789ad2f0161d2e70824954b761bd3279 645 Gene3D G3DSA:3.40.50.300 276 539 1.2E-50 T 13-10-2018 ambt_21505 789ad2f0161d2e70824954b761bd3279 645 SUPERFAMILY SSF52540 294 513 4.77E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_21505 789ad2f0161d2e70824954b761bd3279 645 Pfam PF12848 ABC transporter 218 292 1.2E-26 T 13-10-2018 IPR032781 ABC-transporter extension domain ambt_21505 789ad2f0161d2e70824954b761bd3279 645 Gene3D G3DSA:3.40.50.300 2 275 2.9E-54 T 13-10-2018 ambt_21505 789ad2f0161d2e70824954b761bd3279 645 SMART SM00382 26 223 2.7E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_21505 789ad2f0161d2e70824954b761bd3279 645 SMART SM00382 337 503 4.4E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_21505 789ad2f0161d2e70824954b761bd3279 645 Pfam PF00005 ABC transporter 328 459 2.7E-22 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_21505 789ad2f0161d2e70824954b761bd3279 645 Pfam PF00005 ABC transporter 18 178 1.6E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_21505 789ad2f0161d2e70824954b761bd3279 645 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_09105 4e0dc5be0d11443df50859637322835b 748 Pfam PF00593 TonB dependent receptor 273 745 2.2E-39 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_09105 4e0dc5be0d11443df50859637322835b 748 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 160 1.6E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_09105 4e0dc5be0d11443df50859637322835b 748 SUPERFAMILY SSF56935 32 747 5.49E-115 T 13-10-2018 ambt_09105 4e0dc5be0d11443df50859637322835b 748 Gene3D G3DSA:2.40.170.20 42 748 9.4E-138 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_15135 157d544ed1537873449605826bdd88ed 331 SUPERFAMILY SSF161098 115 314 1.96E-23 T 13-10-2018 IPR035906 MetI-like superfamily ambt_15135 157d544ed1537873449605826bdd88ed 331 Gene3D G3DSA:1.10.3720.10 114 321 5.5E-22 T 13-10-2018 IPR035906 MetI-like superfamily ambt_15135 157d544ed1537873449605826bdd88ed 331 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 139 321 3.7E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 SUPERFAMILY SSF51735 8 244 6.05E-72 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 244 1.7E-54 T 13-10-2018 ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 Gene3D G3DSA:3.40.50.720 1 245 1.2E-73 T 13-10-2018 ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 184 7.6E-4 T 13-10-2018 ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.5E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.5E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_13360 c445cb3c94de4d6bf55ebb04271b9892 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.5E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_14045 82fc1e027fd676dd1b529c4e61559efb 200 Pfam PF01725 Ham1 family 7 193 2.9E-57 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 ambt_14045 82fc1e027fd676dd1b529c4e61559efb 200 Gene3D G3DSA:3.90.950.10 1 199 1.3E-76 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ambt_14045 82fc1e027fd676dd1b529c4e61559efb 200 Hamap MF_01405 dITP/XTP pyrophosphatase. 5 197 50.103 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 ambt_14045 82fc1e027fd676dd1b529c4e61559efb 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 6 194 1.9E-63 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 ambt_14045 82fc1e027fd676dd1b529c4e61559efb 200 SUPERFAMILY SSF52972 3 197 3.66E-72 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ambt_03005 6210e06506d3846ba004a7574ae60e8b 443 SUPERFAMILY SSF53383 75 442 3.94E-59 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_03005 6210e06506d3846ba004a7574ae60e8b 443 Pfam PF00266 Aminotransferase class-V 113 399 2.2E-33 T 13-10-2018 IPR000192 Aminotransferase class V domain ambt_03005 6210e06506d3846ba004a7574ae60e8b 443 Gene3D G3DSA:3.40.640.10 89 341 3.0E-63 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_03005 6210e06506d3846ba004a7574ae60e8b 443 Gene3D G3DSA:3.90.1150.10 75 437 3.0E-63 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 532 45.36 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 SUPERFAMILY SSF52335 6 197 1.02E-69 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 532 2.3E-247 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 Pfam PF02142 MGS-like domain 19 132 1.3E-28 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 SMART SM00798 137 464 1.5E-217 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 463 5.3E-120 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 Gene3D G3DSA:3.40.140.20 395 532 6.9E-61 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 Gene3D G3DSA:3.40.140.20 219 372 1.0E-57 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 SUPERFAMILY SSF53927 224 532 2.11E-132 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 SMART SM00851 19 132 1.0E-56 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 PIRSF PIRSF000414 1 532 4.8E-226 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_21185 1c33e3064065f01968ea27f5fcbbbac3 532 Gene3D G3DSA:3.40.50.1380 1 201 2.1E-84 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ambt_20450 205c6ea8e63da685cfbc7e28c12ee081 160 Gene3D G3DSA:2.60.120.10 1 158 3.9E-45 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_20450 205c6ea8e63da685cfbc7e28c12ee081 160 SUPERFAMILY SSF51182 5 152 2.16E-46 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_20450 205c6ea8e63da685cfbc7e28c12ee081 160 Pfam PF06172 Cupin superfamily (DUF985) 12 145 6.0E-40 T 13-10-2018 IPR009327 Cupin domain of unknown function DUF985 ambt_15490 c814727d56266a2fb71c2b24bbe6cc2b 356 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 10 258 2.5E-59 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_15490 c814727d56266a2fb71c2b24bbe6cc2b 356 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 7 351 25.739 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_15490 c814727d56266a2fb71c2b24bbe6cc2b 356 Gene3D G3DSA:3.30.2340.10 179 311 4.4E-113 T 13-10-2018 ambt_15490 c814727d56266a2fb71c2b24bbe6cc2b 356 Gene3D G3DSA:3.30.2350.20 19 345 4.4E-113 T 13-10-2018 ambt_15490 c814727d56266a2fb71c2b24bbe6cc2b 356 SUPERFAMILY SSF55120 8 347 4.32E-89 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_15490 c814727d56266a2fb71c2b24bbe6cc2b 356 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 11 174 1.1E-38 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_15490 c814727d56266a2fb71c2b24bbe6cc2b 356 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 199 345 7.3E-22 T 13-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_15490 c814727d56266a2fb71c2b24bbe6cc2b 356 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 79 92 - T 13-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 Pfam PF02225 PA domain 486 577 1.3E-9 T 13-10-2018 IPR003137 PA domain ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 Pfam PF05922 Peptidase inhibitor I9 128 192 1.2E-8 T 13-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 Pfam PF00082 Subtilase family 220 699 5.4E-43 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 Gene3D G3DSA:3.50.30.30 455 602 5.1E-135 T 13-10-2018 ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 220 239 1.5E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 304 317 1.5E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 660 676 1.5E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 Gene3D G3DSA:2.60.40.10 1519 1609 1.8E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 Gene3D G3DSA:2.60.40.10 1442 1518 1.9E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 1604 1625 9.8E-7 T 13-10-2018 IPR020008 GlyGly-CTERM domain ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 SUPERFAMILY SSF52743 200 727 2.75E-64 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 661 671 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 Gene3D G3DSA:3.40.50.200 222 738 5.1E-135 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 SUPERFAMILY SSF52025 476 600 5.36E-5 T 13-10-2018 ambt_07960 3512e54a7858aeedb854b352712e56c3 1627 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 225 236 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site ambt_13935 50d85d868e50c540893aa5d17d04bcf9 217 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 5 205 7.5E-65 T 13-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 ambt_13935 50d85d868e50c540893aa5d17d04bcf9 217 Gene3D G3DSA:3.40.50.300 4 214 9.8E-41 T 13-10-2018 ambt_13935 50d85d868e50c540893aa5d17d04bcf9 217 SMART SM00382 28 216 4.3E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13935 50d85d868e50c540893aa5d17d04bcf9 217 Pfam PF00005 ABC transporter 20 168 1.7E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_13935 50d85d868e50c540893aa5d17d04bcf9 217 SUPERFAMILY SSF52540 8 200 1.0E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13935 50d85d868e50c540893aa5d17d04bcf9 217 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_08515 95c3c6aea52bd9c64619f6af91390e1f 223 SUPERFAMILY SSF52540 5 222 1.48E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_08515 95c3c6aea52bd9c64619f6af91390e1f 223 Pfam PF02224 Cytidylate kinase 7 220 4.8E-77 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ambt_08515 95c3c6aea52bd9c64619f6af91390e1f 223 Gene3D G3DSA:3.40.50.300 2 223 3.2E-85 T 13-10-2018 ambt_08515 95c3c6aea52bd9c64619f6af91390e1f 223 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 35.135 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ambt_08515 95c3c6aea52bd9c64619f6af91390e1f 223 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 217 1.3E-82 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ambt_03620 b5bc7fe894e45cbd975bba033102c963 323 Gene3D G3DSA:3.60.10.10 87 316 1.0E-21 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_03620 b5bc7fe894e45cbd975bba033102c963 323 SUPERFAMILY SSF56219 95 317 1.19E-26 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_03620 b5bc7fe894e45cbd975bba033102c963 323 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 98 311 6.4E-13 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ambt_02625 e8bf5d7773e935c6595b068030fc8eea 390 Pfam PF07995 Glucose / Sorbosone dehydrogenase 51 385 6.4E-120 T 13-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase ambt_02625 e8bf5d7773e935c6595b068030fc8eea 390 Gene3D G3DSA:2.120.10.30 41 389 1.6E-101 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_02625 e8bf5d7773e935c6595b068030fc8eea 390 SUPERFAMILY SSF50952 24 388 6.28E-39 T 13-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ambt_17765 593352f80bbe7fbe3b8c2feb0bac68f2 108 SUPERFAMILY SSF81901 23 90 2.49E-15 T 13-10-2018 ambt_17765 593352f80bbe7fbe3b8c2feb0bac68f2 108 SMART SM00671 52 87 2.5E-10 T 13-10-2018 IPR006597 Sel1-like repeat ambt_17765 593352f80bbe7fbe3b8c2feb0bac68f2 108 Pfam PF08238 Sel1 repeat 58 87 5.2E-7 T 13-10-2018 IPR006597 Sel1-like repeat ambt_17765 593352f80bbe7fbe3b8c2feb0bac68f2 108 Pfam PF08238 Sel1 repeat 25 51 0.06 T 13-10-2018 IPR006597 Sel1-like repeat ambt_17765 593352f80bbe7fbe3b8c2feb0bac68f2 108 Gene3D G3DSA:1.25.40.10 22 107 1.7E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_08555 6dbc0c50292e91b86299ca9622caef71 495 SUPERFAMILY SSF47384 253 336 2.55E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_08555 6dbc0c50292e91b86299ca9622caef71 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 3.4E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_08555 6dbc0c50292e91b86299ca9622caef71 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 3.4E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_08555 6dbc0c50292e91b86299ca9622caef71 495 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 3.4E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_08555 6dbc0c50292e91b86299ca9622caef71 495 SMART SM00388 267 335 9.2E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_08555 6dbc0c50292e91b86299ca9622caef71 495 Gene3D G3DSA:1.10.287.130 199 330 6.9E-17 T 13-10-2018 ambt_08555 6dbc0c50292e91b86299ca9622caef71 495 SMART SM00387 381 493 8.0E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_08555 6dbc0c50292e91b86299ca9622caef71 495 SUPERFAMILY SSF55874 324 489 8.77E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_08555 6dbc0c50292e91b86299ca9622caef71 495 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 335 3.9E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_08555 6dbc0c50292e91b86299ca9622caef71 495 Gene3D G3DSA:3.30.565.10 334 494 2.9E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_08555 6dbc0c50292e91b86299ca9622caef71 495 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 491 3.5E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_12915 f0f89b149fdd0c630bafe22273f2d786 203 Gene3D G3DSA:3.30.1150.10 105 202 1.1E-27 T 13-10-2018 ambt_12915 f0f89b149fdd0c630bafe22273f2d786 203 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 124 200 6.0E-18 T 13-10-2018 IPR006260 TonB/TolA, C-terminal ambt_12915 f0f89b149fdd0c630bafe22273f2d786 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 118 139 1.2E-15 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_12915 f0f89b149fdd0c630bafe22273f2d786 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 62 72 1.2E-15 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_12915 f0f89b149fdd0c630bafe22273f2d786 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 158 175 1.2E-15 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_12915 f0f89b149fdd0c630bafe22273f2d786 203 PRINTS PR01374 Gram-negative bacterial tonB protein signature 139 157 1.2E-15 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_12915 f0f89b149fdd0c630bafe22273f2d786 203 SUPERFAMILY SSF74653 114 193 2.75E-25 T 13-10-2018 ambt_12915 f0f89b149fdd0c630bafe22273f2d786 203 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 124 201 2.6E-18 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 ambt_13420 954bf5c2b4386f730eee17a20af25fa4 142 Gene3D G3DSA:1.20.120.340 2 128 4.2E-39 T 13-10-2018 ambt_13420 954bf5c2b4386f730eee17a20af25fa4 142 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 123 2.6E-27 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 ambt_13420 954bf5c2b4386f730eee17a20af25fa4 142 SUPERFAMILY SSF101116 7 129 9.55E-39 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 ambt_13420 954bf5c2b4386f730eee17a20af25fa4 142 Pfam PF02561 Flagellar protein FliS 7 123 8.4E-37 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 ambt_13420 954bf5c2b4386f730eee17a20af25fa4 142 PIRSF PIRSF039090 1 134 1.3E-49 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 ambt_16495 1d4ac6ac594450528b5d2d4aec38291e 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 1.4E-13 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_16495 1d4ac6ac594450528b5d2d4aec38291e 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 1.4E-13 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_16495 1d4ac6ac594450528b5d2d4aec38291e 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 1.4E-13 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_16495 1d4ac6ac594450528b5d2d4aec38291e 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 13-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16495 1d4ac6ac594450528b5d2d4aec38291e 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 81 24.922 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_16495 1d4ac6ac594450528b5d2d4aec38291e 85 Gene3D G3DSA:2.40.50.140 2 84 4.8E-37 T 13-10-2018 ambt_16495 1d4ac6ac594450528b5d2d4aec38291e 85 Pfam PF00366 Ribosomal protein S17 11 77 4.9E-34 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_16495 1d4ac6ac594450528b5d2d4aec38291e 85 SUPERFAMILY SSF50249 6 84 1.33E-33 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_16495 1d4ac6ac594450528b5d2d4aec38291e 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 77 3.3E-37 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_16495 1d4ac6ac594450528b5d2d4aec38291e 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 77 8.0E-30 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 PIRSF PIRSF001553 1 289 1.4E-134 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.408 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 SUPERFAMILY SSF51735 1 122 1.47E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 Gene3D G3DSA:3.40.50.720 1 123 6.6E-52 T 13-10-2018 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 Gene3D G3DSA:3.40.50.261 124 288 1.2E-76 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 SMART SM00881 4 100 7.0E-36 T 13-10-2018 IPR003781 CoA-binding GO:0048037 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.9E-40 T 13-10-2018 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.9E-40 T 13-10-2018 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.9E-40 T 13-10-2018 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.9E-40 T 13-10-2018 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 Pfam PF02629 CoA binding domain 6 99 1.6E-31 T 13-10-2018 IPR003781 CoA-binding GO:0048037 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 13-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 SUPERFAMILY SSF52210 123 286 1.83E-56 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 286 2.9E-146 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ambt_07590 e65ef10605ab1736cd2d551d99d7b6a8 290 Pfam PF00549 CoA-ligase 151 270 4.3E-20 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ambt_00895 50270bab7b09f32814b3319698a78c8f 192 Pfam PF13505 Outer membrane protein beta-barrel domain 12 192 1.6E-25 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel ambt_00895 50270bab7b09f32814b3319698a78c8f 192 SUPERFAMILY SSF56925 29 192 7.32E-31 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ambt_00895 50270bab7b09f32814b3319698a78c8f 192 Gene3D G3DSA:2.40.160.20 28 192 1.1E-29 T 13-10-2018 ambt_18400 13c9cfa76a9acc065b1941884390c761 318 SUPERFAMILY SSF142338 4 308 4.45E-75 T 13-10-2018 ambt_18400 13c9cfa76a9acc065b1941884390c761 318 Hamap MF_01257 2-phospho-L-lactate transferase [cofD]. 1 318 92.076 T 13-10-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 ambt_18400 13c9cfa76a9acc065b1941884390c761 318 Gene3D G3DSA:3.40.50.10680 8 289 1.8E-103 T 13-10-2018 ambt_18400 13c9cfa76a9acc065b1941884390c761 318 Gene3D G3DSA:1.10.8.240 38 125 1.8E-103 T 13-10-2018 ambt_18400 13c9cfa76a9acc065b1941884390c761 318 Pfam PF01933 Uncharacterised protein family UPF0052 4 269 3.6E-49 T 13-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 ambt_18400 13c9cfa76a9acc065b1941884390c761 318 TIGRFAM TIGR01819 F420_cofD: 2-phospho-L-lactate transferase 4 305 2.2E-83 T 13-10-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 313 8.9E-122 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 SUPERFAMILY SSF51905 2 314 3.18E-50 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 6.4E-51 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 Gene3D G3DSA:3.50.50.60 9 312 6.8E-124 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 Gene3D G3DSA:3.50.50.60 118 244 6.8E-124 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 8.0E-75 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 8.0E-75 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 8.0E-75 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 8.0E-75 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 8.0E-75 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 8.0E-75 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 8.0E-75 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 8.0E-75 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 8.0E-75 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.1E-39 T 13-10-2018 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.1E-39 T 13-10-2018 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.1E-39 T 13-10-2018 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.1E-39 T 13-10-2018 ambt_09630 508c5a62c7948eb6e0435202a5fbc121 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.1E-39 T 13-10-2018 ambt_16955 6aa62edb22b6776cfb029c214c0192e0 1093 Pfam PF00176 SNF2 family N-terminal domain 262 418 2.6E-13 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 ambt_16955 6aa62edb22b6776cfb029c214c0192e0 1093 Pfam PF00271 Helicase conserved C-terminal domain 715 841 2.7E-14 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_16955 6aa62edb22b6776cfb029c214c0192e0 1093 SUPERFAMILY SSF52540 269 855 1.77E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_16955 6aa62edb22b6776cfb029c214c0192e0 1093 SMART SM00490 736 841 5.3E-9 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_16955 6aa62edb22b6776cfb029c214c0192e0 1093 SMART SM00487 250 435 7.6E-10 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_16955 6aa62edb22b6776cfb029c214c0192e0 1093 Gene3D G3DSA:3.40.50.10810 252 509 1.5E-24 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily ambt_16955 6aa62edb22b6776cfb029c214c0192e0 1093 Gene3D G3DSA:3.40.50.300 661 872 3.8E-31 T 13-10-2018 ambt_14380 4289b30ac040f0f04fbe7803029c5b58 514 Gene3D G3DSA:3.30.420.150 128 308 5.7E-89 T 13-10-2018 ambt_14380 4289b30ac040f0f04fbe7803029c5b58 514 Gene3D G3DSA:3.30.420.40 25 316 5.7E-89 T 13-10-2018 ambt_14380 4289b30ac040f0f04fbe7803029c5b58 514 SUPERFAMILY SSF53067 148 324 3.89E-46 T 13-10-2018 ambt_14380 4289b30ac040f0f04fbe7803029c5b58 514 SUPERFAMILY SSF109604 326 512 6.73E-47 T 13-10-2018 ambt_14380 4289b30ac040f0f04fbe7803029c5b58 514 Pfam PF02541 Ppx/GppA phosphatase family 37 320 1.4E-81 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 ambt_14380 4289b30ac040f0f04fbe7803029c5b58 514 Gene3D G3DSA:1.10.3210.10 323 514 4.4E-61 T 13-10-2018 ambt_14380 4289b30ac040f0f04fbe7803029c5b58 514 PIRSF PIRSF001267 14 514 4.2E-185 T 13-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 ambt_14380 4289b30ac040f0f04fbe7803029c5b58 514 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 24 319 1.0E-97 T 13-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 ambt_14380 4289b30ac040f0f04fbe7803029c5b58 514 SUPERFAMILY SSF53067 24 143 1.65E-36 T 13-10-2018 ambt_21040 82a86c03bde2dee1cbe511a75997bfda 154 Pfam PF00364 Biotin-requiring enzyme 80 153 2.1E-24 T 13-10-2018 IPR000089 Biotin/lipoyl attachment ambt_21040 82a86c03bde2dee1cbe511a75997bfda 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 3.2E-16 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ambt_21040 82a86c03bde2dee1cbe511a75997bfda 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 3.2E-16 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ambt_21040 82a86c03bde2dee1cbe511a75997bfda 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 3.2E-16 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ambt_21040 82a86c03bde2dee1cbe511a75997bfda 154 SUPERFAMILY SSF51230 78 154 4.19E-25 T 13-10-2018 IPR011053 Single hybrid motif ambt_21040 82a86c03bde2dee1cbe511a75997bfda 154 Gene3D G3DSA:2.40.50.100 76 154 7.6E-30 T 13-10-2018 ambt_21040 82a86c03bde2dee1cbe511a75997bfda 154 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 13-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ambt_21040 82a86c03bde2dee1cbe511a75997bfda 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 1.4E-57 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ambt_04350 c8b3e388a319ffcebd498b747c9d884e 149 Pfam PF03477 ATP cone domain 50 136 1.5E-17 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 ambt_04350 c8b3e388a319ffcebd498b747c9d884e 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 86.227 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ambt_04350 c8b3e388a319ffcebd498b747c9d884e 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.0E-69 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ambt_20875 200d96facf8d7e615872e51b72a96a61 252 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 179 195 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ambt_20875 200d96facf8d7e615872e51b72a96a61 252 SUPERFAMILY SSF51556 1 239 1.44E-44 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_20875 200d96facf8d7e615872e51b72a96a61 252 Pfam PF01026 TatD related DNase 1 240 6.6E-41 T 13-10-2018 IPR001130 TatD family GO:0016788 ambt_20875 200d96facf8d7e615872e51b72a96a61 252 Gene3D G3DSA:3.20.20.140 1 251 9.5E-68 T 13-10-2018 ambt_20875 200d96facf8d7e615872e51b72a96a61 252 PIRSF PIRSF005902 1 245 3.3E-39 T 13-10-2018 IPR001130 TatD family GO:0016788 ambt_16740 27d5deec84c4464f931abaed65b93721 167 Pfam PF01584 CheW-like domain 17 153 4.0E-36 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_16740 27d5deec84c4464f931abaed65b93721 167 Gene3D G3DSA:2.40.50.180 36 145 2.7E-38 T 13-10-2018 ambt_16740 27d5deec84c4464f931abaed65b93721 167 SUPERFAMILY SSF50341 14 155 7.85E-38 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ambt_16740 27d5deec84c4464f931abaed65b93721 167 SMART SM00260 13 150 2.9E-37 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ambt_16740 27d5deec84c4464f931abaed65b93721 167 Gene3D G3DSA:2.30.30.40 20 144 2.7E-38 T 13-10-2018 ambt_11975 6751706d964ea616cc3cd93c56a6c1e3 281 PIRSF PIRSF028200 1 281 1.5E-66 T 13-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 ambt_08710 345102cb12bdc55ead9d38747530c5ae 304 Pfam PF03466 LysR substrate binding domain 94 298 3.3E-15 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_08710 345102cb12bdc55ead9d38747530c5ae 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 4.0E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_08710 345102cb12bdc55ead9d38747530c5ae 304 Gene3D G3DSA:1.10.10.10 5 92 5.4E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_08710 345102cb12bdc55ead9d38747530c5ae 304 SUPERFAMILY SSF53850 93 299 5.27E-19 T 13-10-2018 ambt_08710 345102cb12bdc55ead9d38747530c5ae 304 SUPERFAMILY SSF46785 5 89 1.72E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_08710 345102cb12bdc55ead9d38747530c5ae 304 Gene3D G3DSA:3.40.190.290 94 299 1.6E-35 T 13-10-2018 ambt_03600 32eaaf004498af9f4fa77ce9a7c73426 342 Gene3D G3DSA:3.90.550.10 1 256 2.4E-59 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_03600 32eaaf004498af9f4fa77ce9a7c73426 342 SUPERFAMILY SSF53448 8 224 1.31E-53 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_03600 32eaaf004498af9f4fa77ce9a7c73426 342 Pfam PF00535 Glycosyl transferase family 2 10 138 8.2E-31 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_11215 7f8ee15f2e16d07214f4fcdd78da5d9c 297 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 50 233 6.9E-34 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ambt_11215 7f8ee15f2e16d07214f4fcdd78da5d9c 297 Gene3D G3DSA:2.40.100.10 5 236 2.7E-37 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily ambt_11215 7f8ee15f2e16d07214f4fcdd78da5d9c 297 SUPERFAMILY SSF50891 49 221 8.77E-35 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily ambt_06625 452fc3551d0fba4bde4f7537027b58fe 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.6E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06625 452fc3551d0fba4bde4f7537027b58fe 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.6E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06625 452fc3551d0fba4bde4f7537027b58fe 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.6E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06625 452fc3551d0fba4bde4f7537027b58fe 300 SUPERFAMILY SSF53850 90 293 1.71E-44 T 13-10-2018 ambt_06625 452fc3551d0fba4bde4f7537027b58fe 300 Gene3D G3DSA:3.40.190.10 171 265 1.1E-55 T 13-10-2018 ambt_06625 452fc3551d0fba4bde4f7537027b58fe 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.3E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06625 452fc3551d0fba4bde4f7537027b58fe 300 Pfam PF03466 LysR substrate binding domain 105 292 6.4E-17 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_06625 452fc3551d0fba4bde4f7537027b58fe 300 SUPERFAMILY SSF46785 2 85 1.09E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_06625 452fc3551d0fba4bde4f7537027b58fe 300 Gene3D G3DSA:3.40.190.10 90 290 1.1E-55 T 13-10-2018 ambt_06625 452fc3551d0fba4bde4f7537027b58fe 300 Gene3D G3DSA:1.10.10.10 1 89 1.9E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_08940 a9b30fcfe7ce7923f61dffb29987c9b5 242 PIRSF PIRSF006325 1 242 8.6E-103 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 ambt_08940 a9b30fcfe7ce7923f61dffb29987c9b5 242 Gene3D G3DSA:3.40.50.150 18 242 1.7E-58 T 13-10-2018 ambt_08940 a9b30fcfe7ce7923f61dffb29987c9b5 242 SUPERFAMILY SSF53335 19 242 4.3E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_08940 a9b30fcfe7ce7923f61dffb29987c9b5 242 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 40.16 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 ambt_08940 a9b30fcfe7ce7923f61dffb29987c9b5 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 5 242 2.9E-97 T 13-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 ambt_08940 a9b30fcfe7ce7923f61dffb29987c9b5 242 Pfam PF13649 Methyltransferase domain 60 158 3.1E-13 T 13-10-2018 ambt_13730 2bdc6ebe6f39f451f6b58f6587159379 265 SUPERFAMILY SSF55120 24 260 7.04E-58 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_13730 2bdc6ebe6f39f451f6b58f6587159379 265 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 76 90 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_13730 2bdc6ebe6f39f451f6b58f6587159379 265 Gene3D G3DSA:3.30.2350.10 20 249 1.0E-54 T 13-10-2018 ambt_13730 2bdc6ebe6f39f451f6b58f6587159379 265 Pfam PF00849 RNA pseudouridylate synthase 36 194 2.0E-30 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_13620 639c3ab8ac6f27d356ae8a32e38fbb9c 299 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 297 5.1E-42 T 13-10-2018 IPR000160 GGDEF domain ambt_13620 639c3ab8ac6f27d356ae8a32e38fbb9c 299 SMART SM00267 131 299 1.7E-48 T 13-10-2018 IPR000160 GGDEF domain ambt_13620 639c3ab8ac6f27d356ae8a32e38fbb9c 299 SUPERFAMILY SSF55073 147 297 2.67E-41 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_13620 639c3ab8ac6f27d356ae8a32e38fbb9c 299 Pfam PF00990 Diguanylate cyclase, GGDEF domain 144 295 5.7E-39 T 13-10-2018 IPR000160 GGDEF domain ambt_13620 639c3ab8ac6f27d356ae8a32e38fbb9c 299 Gene3D G3DSA:3.30.70.270 126 298 4.7E-47 T 13-10-2018 ambt_12795 13da5b4f4467cf697e13b53ed824d8bf 302 Gene3D G3DSA:1.10.10.10 5 85 1.2E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_12795 13da5b4f4467cf697e13b53ed824d8bf 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 9.7E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_12795 13da5b4f4467cf697e13b53ed824d8bf 302 SUPERFAMILY SSF46785 7 84 2.63E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_12795 13da5b4f4467cf697e13b53ed824d8bf 302 Gene3D G3DSA:3.40.190.10 107 281 3.3E-31 T 13-10-2018 ambt_12795 13da5b4f4467cf697e13b53ed824d8bf 302 Gene3D G3DSA:3.40.190.10 166 270 3.3E-31 T 13-10-2018 ambt_12795 13da5b4f4467cf697e13b53ed824d8bf 302 Pfam PF03466 LysR substrate binding domain 98 275 5.4E-18 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_12795 13da5b4f4467cf697e13b53ed824d8bf 302 SUPERFAMILY SSF53850 95 287 1.03E-23 T 13-10-2018 ambt_12795 13da5b4f4467cf697e13b53ed824d8bf 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 7.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_12795 13da5b4f4467cf697e13b53ed824d8bf 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 7.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_12795 13da5b4f4467cf697e13b53ed824d8bf 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 7.2E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_21130 cd43e7878bf6d3d94a56aade4cc0a005 316 Pfam PF00248 Aldo/keto reductase family 17 313 2.6E-68 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain ambt_21130 cd43e7878bf6d3d94a56aade4cc0a005 316 SUPERFAMILY SSF51430 4 314 5.37E-87 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_21130 cd43e7878bf6d3d94a56aade4cc0a005 316 Gene3D G3DSA:3.20.20.100 3 316 9.5E-96 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_05905 c84c4f4316d361779622eb86698d670b 994 Pfam PF03993 Domain of Unknown Function (DUF349) 721 765 5.1E-7 T 13-10-2018 IPR007139 Protein of unknown function DUF349 ambt_05905 c84c4f4316d361779622eb86698d670b 994 Pfam PF03993 Domain of Unknown Function (DUF349) 624 696 9.0E-10 T 13-10-2018 IPR007139 Protein of unknown function DUF349 ambt_12050 56bf9006b4944f3706e7c2e696dbed36 118 Gene3D G3DSA:3.20.160.10 1 117 3.3E-45 T 13-10-2018 IPR038604 Type III effector HopJ superfamily ambt_12050 56bf9006b4944f3706e7c2e696dbed36 118 Pfam PF08888 HopJ type III effector protein 8 114 1.3E-44 T 13-10-2018 IPR014984 HopJ type III effector protein ambt_15535 513ce958a13689d326f2a7f6299c064e 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 7.0E-17 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15535 513ce958a13689d326f2a7f6299c064e 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.7E-36 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15535 513ce958a13689d326f2a7f6299c064e 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.7E-36 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15535 513ce958a13689d326f2a7f6299c064e 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.7E-36 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15535 513ce958a13689d326f2a7f6299c064e 85 Gene3D G3DSA:2.40.50.100 21 85 1.1E-29 T 13-10-2018 ambt_15535 513ce958a13689d326f2a7f6299c064e 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_15535 513ce958a13689d326f2a7f6299c064e 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 3.5E-41 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15535 513ce958a13689d326f2a7f6299c064e 85 Pfam PF01016 Ribosomal L27 protein 2 82 4.4E-38 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15535 513ce958a13689d326f2a7f6299c064e 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.533 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15535 513ce958a13689d326f2a7f6299c064e 85 SUPERFAMILY SSF110324 2 82 2.96E-33 T 13-10-2018 ambt_21215 232ddf61a6ffd035ece978673b4fb7df 77 Pfam PF13276 HTH-like domain 27 73 1.9E-9 T 13-10-2018 IPR025948 HTH-like domain ambt_00730 e48f30cd053d676b563cf9ebf9221379 330 PIRSF PIRSF029693 3 330 4.3E-143 T 13-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 ambt_00730 e48f30cd053d676b563cf9ebf9221379 330 Pfam PF10095 Uncharacterized protein conserved in bacteria (DUF2333) 8 330 2.3E-149 T 13-10-2018 IPR016936 Uncharacterised conserved protein UCP029693 ambt_14170 04ae78763fd40238264f25a5529f710a 85 Gene3D G3DSA:1.10.8.1250 12 84 4.7E-10 T 13-10-2018 IPR038296 Antitoxin ParD superfamily ambt_14170 04ae78763fd40238264f25a5529f710a 85 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 65 1.2E-6 T 13-10-2018 IPR022789 Antitoxin ParD ambt_14170 04ae78763fd40238264f25a5529f710a 85 SUPERFAMILY SSF47598 2 44 3.22E-7 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 ambt_14285 d831b243a80451002521ebf3ff9e516d 174 Pfam PF01047 MarR family 65 122 2.1E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_14285 d831b243a80451002521ebf3ff9e516d 174 SMART SM00347 58 157 1.4E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_14285 d831b243a80451002521ebf3ff9e516d 174 SUPERFAMILY SSF46785 36 167 2.51E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_14285 d831b243a80451002521ebf3ff9e516d 174 Gene3D G3DSA:1.10.10.10 31 169 1.8E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_11330 823a84cf75f15aa418c09064405d5694 736 Gene3D G3DSA:3.40.50.300 466 734 1.1E-62 T 13-10-2018 ambt_11330 823a84cf75f15aa418c09064405d5694 736 Pfam PF13614 AAA domain 553 690 9.0E-9 T 13-10-2018 IPR025669 AAA domain ambt_11330 823a84cf75f15aa418c09064405d5694 736 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 523 729 4.3E-41 T 13-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 ambt_11330 823a84cf75f15aa418c09064405d5694 736 SUPERFAMILY SSF52540 542 729 2.27E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_11330 823a84cf75f15aa418c09064405d5694 736 Pfam PF02706 Chain length determinant protein 18 109 3.0E-10 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 ambt_07140 81b0aaa113fb0ec5268a5ea36c031cce 188 SUPERFAMILY SSF88659 130 185 1.86E-10 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_07140 81b0aaa113fb0ec5268a5ea36c031cce 188 SUPERFAMILY SSF88946 19 111 3.73E-19 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_07140 81b0aaa113fb0ec5268a5ea36c031cce 188 Gene3D G3DSA:1.10.1740.10 16 127 3.0E-20 T 13-10-2018 ambt_07140 81b0aaa113fb0ec5268a5ea36c031cce 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 184 9.5E-19 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_07140 81b0aaa113fb0ec5268a5ea36c031cce 188 Pfam PF08281 Sigma-70, region 4 131 180 3.3E-7 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_07140 81b0aaa113fb0ec5268a5ea36c031cce 188 Gene3D G3DSA:1.10.10.10 129 186 1.7E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_07140 81b0aaa113fb0ec5268a5ea36c031cce 188 Pfam PF04542 Sigma-70 region 2 41 105 1.4E-9 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_04695 66e0b388db2c9795fd5355b9347e1bcc 139 Gene3D G3DSA:3.40.630.30 6 134 3.2E-28 T 13-10-2018 ambt_04695 66e0b388db2c9795fd5355b9347e1bcc 139 SUPERFAMILY SSF55729 9 125 1.17E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_04695 66e0b388db2c9795fd5355b9347e1bcc 139 Pfam PF13508 Acetyltransferase (GNAT) domain 43 124 4.2E-10 T 13-10-2018 IPR000182 GNAT domain ambt_07415 e113e63e116179af426aa51c3f88429c 419 Pfam PF00589 Phage integrase family 178 312 1.3E-6 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_07415 e113e63e116179af426aa51c3f88429c 419 Gene3D G3DSA:1.10.443.10 148 369 8.7E-15 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_07415 e113e63e116179af426aa51c3f88429c 419 Gene3D G3DSA:1.10.150.130 30 101 5.1E-6 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_07415 e113e63e116179af426aa51c3f88429c 419 SUPERFAMILY SSF56349 150 361 1.35E-16 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_15210 04217ae0f965a6c9ad1a9143647cf144 104 PIRSF PIRSF003113 1 100 2.4E-30 T 13-10-2018 IPR002634 BolA protein ambt_15210 04217ae0f965a6c9ad1a9143647cf144 104 Gene3D G3DSA:3.30.300.90 1 89 1.7E-30 T 13-10-2018 ambt_15210 04217ae0f965a6c9ad1a9143647cf144 104 SUPERFAMILY SSF82657 2 86 3.53E-26 T 13-10-2018 IPR036065 BolA-like superfamily ambt_15210 04217ae0f965a6c9ad1a9143647cf144 104 Pfam PF01722 BolA-like protein 11 84 2.6E-27 T 13-10-2018 IPR002634 BolA protein ambt_20355 bea110e2b1de03ca00f8b98b51bd7298 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ambt_20355 bea110e2b1de03ca00f8b98b51bd7298 137 Gene3D G3DSA:3.30.160.20 1 136 1.3E-37 T 13-10-2018 ambt_20355 bea110e2b1de03ca00f8b98b51bd7298 137 Pfam PF00472 RF-1 domain 8 131 1.3E-23 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ambt_20355 bea110e2b1de03ca00f8b98b51bd7298 137 SUPERFAMILY SSF75620 7 116 1.57E-12 T 13-10-2018 ambt_12205 e51f3a81901d2c261941ce89d4884314 381 SUPERFAMILY SSF48600 10 92 4.03E-22 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ambt_12205 e51f3a81901d2c261941ce89d4884314 381 Gene3D G3DSA:1.10.3660.10 252 377 2.6E-44 T 13-10-2018 ambt_12205 e51f3a81901d2c261941ce89d4884314 381 Pfam PF01817 Chorismate mutase type II 12 89 2.5E-19 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ambt_12205 e51f3a81901d2c261941ce89d4884314 381 Gene3D G3DSA:3.40.50.720 84 250 6.9E-40 T 13-10-2018 ambt_12205 e51f3a81901d2c261941ce89d4884314 381 SMART SM00830 12 92 6.2E-31 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ambt_12205 e51f3a81901d2c261941ce89d4884314 381 SUPERFAMILY SSF51735 97 242 1.34E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_12205 e51f3a81901d2c261941ce89d4884314 381 Gene3D G3DSA:1.20.59.10 3 83 1.4E-16 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ambt_12205 e51f3a81901d2c261941ce89d4884314 381 PIRSF PIRSF001499 4 377 2.0E-138 T 13-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 ambt_12205 e51f3a81901d2c261941ce89d4884314 381 Pfam PF02153 Prephenate dehydrogenase 142 327 8.5E-29 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 ambt_12205 e51f3a81901d2c261941ce89d4884314 381 SUPERFAMILY SSF48179 245 368 3.63E-37 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_12205 e51f3a81901d2c261941ce89d4884314 381 TIGRFAM TIGR01799 CM_T: chorismate mutase 10 89 7.1E-32 T 13-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 ambt_11055 6a532b44f20910acd0760b6a9e2022ed 345 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 30 335 6.6E-105 T 13-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 ambt_11055 6a532b44f20910acd0760b6a9e2022ed 345 Gene3D G3DSA:2.40.50.630 271 333 1.9E-112 T 13-10-2018 ambt_11055 6a532b44f20910acd0760b6a9e2022ed 345 SUPERFAMILY SSF53187 22 337 3.64E-76 T 13-10-2018 ambt_11055 6a532b44f20910acd0760b6a9e2022ed 345 PIRSF PIRSF017020 4 344 4.6E-136 T 13-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 ambt_11055 6a532b44f20910acd0760b6a9e2022ed 345 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 55 338 2.2E-56 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 ambt_11055 6a532b44f20910acd0760b6a9e2022ed 345 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 345 139.398 T 13-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 ambt_11055 6a532b44f20910acd0760b6a9e2022ed 345 Gene3D G3DSA:3.40.630.10 31 270 1.9E-112 T 13-10-2018 ambt_12685 6f33a6a6a87500a461d94c48ec7bdbd6 462 Gene3D G3DSA:1.10.287.130 262 320 1.4E-29 T 13-10-2018 ambt_12685 6f33a6a6a87500a461d94c48ec7bdbd6 462 SMART SM00387 355 461 1.4E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_12685 6f33a6a6a87500a461d94c48ec7bdbd6 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 2.8E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_12685 6f33a6a6a87500a461d94c48ec7bdbd6 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 2.8E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_12685 6f33a6a6a87500a461d94c48ec7bdbd6 462 SUPERFAMILY SSF47384 241 320 5.1E-5 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_12685 6f33a6a6a87500a461d94c48ec7bdbd6 462 Gene3D G3DSA:3.30.565.10 321 455 1.4E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_12685 6f33a6a6a87500a461d94c48ec7bdbd6 462 SUPERFAMILY SSF55874 337 457 1.57E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_12685 6f33a6a6a87500a461d94c48ec7bdbd6 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 460 2.8E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_18940 e51b8cb5c51f316521d7e57a713a60c3 457 Gene3D G3DSA:3.40.50.150 213 354 1.6E-6 T 13-10-2018 ambt_18940 e51b8cb5c51f316521d7e57a713a60c3 457 Gene3D G3DSA:3.40.50.150 1 156 8.2E-11 T 13-10-2018 ambt_18940 e51b8cb5c51f316521d7e57a713a60c3 457 SUPERFAMILY SSF53335 213 327 1.33E-10 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_18940 e51b8cb5c51f316521d7e57a713a60c3 457 SUPERFAMILY SSF53335 27 159 2.94E-13 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_18940 e51b8cb5c51f316521d7e57a713a60c3 457 Pfam PF08241 Methyltransferase domain 62 114 9.0E-9 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ambt_04165 9bfacc1a788c22e0843d467812781162 281 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 26 3.3E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04165 9bfacc1a788c22e0843d467812781162 281 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04165 9bfacc1a788c22e0843d467812781162 281 Pfam PF16074 Type IV Pilus-assembly protein W 152 272 6.3E-20 T 13-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 ambt_04165 9bfacc1a788c22e0843d467812781162 281 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 2.4E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_01105 4be02b867ffa3fe6560486a22a986f83 703 SMART SM00900 81 176 0.0011 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 ambt_01105 4be02b867ffa3fe6560486a22a986f83 703 Pfam PF12801 4Fe-4S binding domain 587 623 0.0015 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ambt_01105 4be02b867ffa3fe6560486a22a986f83 703 Pfam PF12801 4Fe-4S binding domain 486 532 1.3E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ambt_01105 4be02b867ffa3fe6560486a22a986f83 703 PIRSF PIRSF036354 3 702 6.9E-165 T 13-10-2018 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 ambt_01105 4be02b867ffa3fe6560486a22a986f83 703 SUPERFAMILY SSF54862 500 672 9.78E-7 T 13-10-2018 ambt_21950 7a91613c0b39625c1e5e2a6df7ed766f 418 Pfam PF13356 Arm DNA-binding domain 4 87 6.2E-16 T 13-10-2018 IPR025166 Integrase, DNA-binding domain ambt_21950 7a91613c0b39625c1e5e2a6df7ed766f 418 Pfam PF00589 Phage integrase family 223 381 3.5E-12 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_21950 7a91613c0b39625c1e5e2a6df7ed766f 418 Gene3D G3DSA:1.10.443.10 201 399 1.2E-16 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_21950 7a91613c0b39625c1e5e2a6df7ed766f 418 Gene3D G3DSA:3.30.160.390 2 88 1.9E-17 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily ambt_21950 7a91613c0b39625c1e5e2a6df7ed766f 418 SUPERFAMILY SSF56349 100 394 3.83E-48 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_21950 7a91613c0b39625c1e5e2a6df7ed766f 418 Gene3D G3DSA:1.10.150.130 93 200 8.1E-34 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_17165 3dd96ce239bf0211d0594c63c4092bad 287 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_17165 3dd96ce239bf0211d0594c63c4092bad 287 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 2.1E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_17165 3dd96ce239bf0211d0594c63c4092bad 287 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 32 9.7E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_17165 3dd96ce239bf0211d0594c63c4092bad 287 SUPERFAMILY SSF54523 13 101 5.49E-5 T 13-10-2018 ambt_11530 c169b05b023fec2f916919e013dcefb6 216 SUPERFAMILY SSF52172 3 176 2.26E-28 T 13-10-2018 IPR011006 CheY-like superfamily ambt_11530 c169b05b023fec2f916919e013dcefb6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.1E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_11530 c169b05b023fec2f916919e013dcefb6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.1E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_11530 c169b05b023fec2f916919e013dcefb6 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.1E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_11530 c169b05b023fec2f916919e013dcefb6 216 SMART SM00448 3 116 6.3E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_11530 c169b05b023fec2f916919e013dcefb6 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_11530 c169b05b023fec2f916919e013dcefb6 216 Gene3D G3DSA:1.10.10.10 152 215 5.4E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_11530 c169b05b023fec2f916919e013dcefb6 216 Gene3D G3DSA:3.40.50.2300 1 143 9.2E-28 T 13-10-2018 ambt_11530 c169b05b023fec2f916919e013dcefb6 216 Pfam PF00072 Response regulator receiver domain 5 116 1.9E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_11530 c169b05b023fec2f916919e013dcefb6 216 SMART SM00421 151 208 4.9E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_11530 c169b05b023fec2f916919e013dcefb6 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 204 1.9E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_04215 7ceb794ed615c73a552dcbe7f8e0bbf4 277 SUPERFAMILY SSF52402 3 276 5.95E-79 T 13-10-2018 ambt_04215 7ceb794ed615c73a552dcbe7f8e0bbf4 277 TIGRFAM TIGR00552 nadE: NAD+ synthetase 24 270 3.7E-69 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 ambt_04215 7ceb794ed615c73a552dcbe7f8e0bbf4 277 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 274 45.66 T 13-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 ambt_04215 7ceb794ed615c73a552dcbe7f8e0bbf4 277 Pfam PF02540 NAD synthase 22 268 2.1E-65 T 13-10-2018 IPR022310 NAD/GMP synthase ambt_04215 7ceb794ed615c73a552dcbe7f8e0bbf4 277 Gene3D G3DSA:3.40.50.620 1 276 5.4E-82 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 3.8E-121 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 8.3E-126 T 13-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 SUPERFAMILY SSF75138 229 353 4.97E-23 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 Gene3D G3DSA:3.40.50.10750 529 682 6.1E-132 T 13-10-2018 ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 PIRSF PIRSF006107 1 711 0.0 T 13-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 SUPERFAMILY SSF52540 1 240 5.84E-19 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 Gene3D G3DSA:3.40.50.10950 397 709 6.1E-132 T 13-10-2018 ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 Gene3D G3DSA:3.40.50.300 3 220 5.3E-13 T 13-10-2018 ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 SUPERFAMILY SSF53659 392 709 1.73E-92 T 13-10-2018 ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 Gene3D G3DSA:3.40.1390.20 223 363 4.4E-18 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 Pfam PF13500 AAA domain 3 230 2.7E-31 T 13-10-2018 ambt_11425 5139f1ec0497a9dff4ea89c8c13170ac 711 Pfam PF07085 DRTGG domain 233 344 5.0E-27 T 13-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ambt_16785 667bf316ea8f9453458cf8cdca54f921 57 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 1.5E-19 T 13-10-2018 IPR021677 Protein of unknown function DUF2986 ambt_11545 41352a4d571a16090fe7e9c838a0e18e 432 Gene3D G3DSA:1.10.1740.110 242 349 7.4E-106 T 13-10-2018 ambt_11545 41352a4d571a16090fe7e9c838a0e18e 432 Gene3D G3DSA:3.40.50.1820 74 416 7.4E-106 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_11545 41352a4d571a16090fe7e9c838a0e18e 432 SUPERFAMILY SSF53474 58 429 1.09E-66 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_11545 41352a4d571a16090fe7e9c838a0e18e 432 PIRSF PIRSF000443 22 432 3.9E-100 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 ambt_11545 41352a4d571a16090fe7e9c838a0e18e 432 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 55 429 21.65 T 13-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 ambt_11545 41352a4d571a16090fe7e9c838a0e18e 432 Pfam PF00561 alpha/beta hydrolase fold 170 283 9.8E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_18885 c523c7718cea78f06fb400eb1269de86 181 SUPERFAMILY SSF51182 1 178 8.9E-77 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_18885 c523c7718cea78f06fb400eb1269de86 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 3 177 6.7E-83 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ambt_18885 c523c7718cea78f06fb400eb1269de86 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 179 2.0E-69 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ambt_18885 c523c7718cea78f06fb400eb1269de86 181 Gene3D G3DSA:2.60.120.10 1 180 1.1E-73 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_18885 c523c7718cea78f06fb400eb1269de86 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 1.0E-73 T 13-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ambt_18110 31632c652eaca6736c1a93534c11060e 94 Gene3D G3DSA:3.30.2310.20 1 94 7.5E-29 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ambt_18110 31632c652eaca6736c1a93534c11060e 94 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 86 3.1E-10 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ambt_18110 31632c652eaca6736c1a93534c11060e 94 SUPERFAMILY SSF143011 1 83 2.49E-21 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ambt_18110 31632c652eaca6736c1a93534c11060e 94 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 83 5.1E-13 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 490 2.7E-186 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 185 7.8E-54 T 13-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 9.2E-119 T 13-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 175 181 - T 13-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 PIRSF PIRSF000110 1 492 3.2E-175 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 Gene3D G3DSA:3.40.50.720 12 438 3.3E-168 T 13-10-2018 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 SUPERFAMILY SSF55347 175 490 1.86E-115 T 13-10-2018 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 490 86.494 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 165 193 2.3E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 217 234 2.3E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 235 251 2.3E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 326 352 2.3E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 141 154 2.3E-49 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 SUPERFAMILY SSF51735 5 188 4.72E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_05815 38e74b5e8dd3f3c929beff8d3fb3857e 498 Gene3D G3DSA:3.30.360.10 175 476 3.3E-168 T 13-10-2018 ambt_13055 6aacda7e02dcf79a3add5882796a8d54 268 SMART SM00382 38 232 2.8E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13055 6aacda7e02dcf79a3add5882796a8d54 268 Gene3D G3DSA:3.40.50.300 3 266 1.4E-62 T 13-10-2018 ambt_13055 6aacda7e02dcf79a3add5882796a8d54 268 Pfam PF00005 ABC transporter 31 183 2.5E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_13055 6aacda7e02dcf79a3add5882796a8d54 268 SUPERFAMILY SSF52540 7 253 1.23E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00995 2b730d7defe1c2d60dbec91cd28cebd4 269 Pfam PF01618 MotA/TolQ/ExbB proton channel family 128 247 7.9E-13 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ambt_03670 a912248bd6aa011da072422f66f580fe 841 Gene3D G3DSA:1.25.40.10 1 306 1.2E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03670 a912248bd6aa011da072422f66f580fe 841 SUPERFAMILY SSF48452 357 656 4.55E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03670 a912248bd6aa011da072422f66f580fe 841 SUPERFAMILY SSF48452 610 792 1.61E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03670 a912248bd6aa011da072422f66f580fe 841 SUPERFAMILY SSF48452 115 303 1.3E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03670 a912248bd6aa011da072422f66f580fe 841 Gene3D G3DSA:1.25.40.10 729 800 5.6E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03670 a912248bd6aa011da072422f66f580fe 841 Gene3D G3DSA:1.25.40.10 598 720 5.0E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03670 a912248bd6aa011da072422f66f580fe 841 Gene3D G3DSA:1.25.40.10 323 588 3.4E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_19245 e5c0289d1ea8ef48f894623be90db336 542 Pfam PF03109 ABC1 family 114 229 1.0E-32 T 13-10-2018 IPR004147 UbiB domain ambt_19245 e5c0289d1ea8ef48f894623be90db336 542 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 538 52.313 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 ambt_19245 e5c0289d1ea8ef48f894623be90db336 542 SUPERFAMILY SSF56112 91 434 1.32E-48 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_19245 e5c0289d1ea8ef48f894623be90db336 542 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 4 443 1.2E-174 T 13-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 SMART SM00387 335 460 4.2E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 SMART SM00388 229 291 1.9E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 SUPERFAMILY SSF158472 173 224 1.57E-6 T 13-10-2018 ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 Gene3D G3DSA:1.10.287.130 177 292 9.5E-27 T 13-10-2018 ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 8.1E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 8.1E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 8.1E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 Pfam PF00672 HAMP domain 173 222 1.5E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 SUPERFAMILY SSF47384 212 289 3.92E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 457 8.2E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 290 4.3E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 Gene3D G3DSA:3.30.450.170 25 145 7.1E-37 T 13-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 SUPERFAMILY SSF55874 281 457 6.55E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 Pfam PF16750 Sensor domain of 2-component histidine kinase 37 144 8.9E-39 T 13-10-2018 IPR031930 2-component histidine kinase, sensor domain ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 SMART SM00304 173 228 1.2E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_16770 3f7aa2e2f03b2a991a19f6bf4d26ff14 464 Gene3D G3DSA:3.30.565.10 296 462 4.7E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_04525 7548f6ed60be9a040c1848fd2ded9250 1098 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 106 1.0E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_04525 7548f6ed60be9a040c1848fd2ded9250 1098 SMART SM00862 34 107 6.8E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_04525 7548f6ed60be9a040c1848fd2ded9250 1098 Gene3D G3DSA:1.10.10.10 10 127 3.3E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_04525 7548f6ed60be9a040c1848fd2ded9250 1098 Gene3D G3DSA:1.25.40.10 653 941 5.3E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04525 7548f6ed60be9a040c1848fd2ded9250 1098 SUPERFAMILY SSF52540 146 373 3.19E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04525 7548f6ed60be9a040c1848fd2ded9250 1098 SUPERFAMILY SSF46894 13 107 1.08E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_04525 7548f6ed60be9a040c1848fd2ded9250 1098 SUPERFAMILY SSF48452 727 867 2.98E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_01815 4123bd8e5ed5375a170a02e0fd6c9323 451 SUPERFAMILY SSF103473 2 432 1.02E-46 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_01815 4123bd8e5ed5375a170a02e0fd6c9323 451 Gene3D G3DSA:1.20.1720.10 1 225 1.4E-39 T 13-10-2018 ambt_01815 4123bd8e5ed5375a170a02e0fd6c9323 451 PRINTS PR01036 Tetracycline resistance protein TetB signature 376 395 3.0E-5 T 13-10-2018 ambt_01815 4123bd8e5ed5375a170a02e0fd6c9323 451 PRINTS PR01036 Tetracycline resistance protein TetB signature 85 105 3.0E-5 T 13-10-2018 ambt_01815 4123bd8e5ed5375a170a02e0fd6c9323 451 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 139 3.0E-5 T 13-10-2018 ambt_01815 4123bd8e5ed5375a170a02e0fd6c9323 451 PRINTS PR01036 Tetracycline resistance protein TetB signature 179 197 3.0E-5 T 13-10-2018 ambt_01815 4123bd8e5ed5375a170a02e0fd6c9323 451 Gene3D G3DSA:1.20.1250.20 234 436 7.1E-9 T 13-10-2018 ambt_01815 4123bd8e5ed5375a170a02e0fd6c9323 451 Pfam PF07690 Major Facilitator Superfamily 3 376 3.1E-35 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 Gene3D G3DSA:1.10.8.540 509 598 8.4E-26 T 13-10-2018 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 Pfam PF00771 FHIPEP family 31 689 6.8E-262 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 PIRSF PIRSF005419 7 699 1.4E-241 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 24 697 2.8E-259 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 Gene3D G3DSA:3.40.30.60 365 508 1.7E-50 T 13-10-2018 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 Gene3D G3DSA:1.10.490.80 600 697 1.1E-12 T 13-10-2018 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 3.5E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 3.5E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 3.5E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 3.5E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 3.5E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 3.5E-54 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ambt_13220 f7ce74679645fd9f8b47d2cf28d3057b 699 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 13-10-2018 IPR025505 FHIPEP conserved site ambt_07045 e7ed2dd6dbcc43c95e26ecb7555bf4a0 656 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 495 7.0E-162 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ambt_07045 e7ed2dd6dbcc43c95e26ecb7555bf4a0 656 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 495 3.8E-191 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ambt_07045 e7ed2dd6dbcc43c95e26ecb7555bf4a0 656 ProSitePatterns PS01303 BCCT family of transporters signature. 314 323 - T 13-10-2018 IPR018093 BCCT transporter, conserved site ambt_00960 3b055efc0387ca7c26362e428da16c17 814 Pfam PF01061 ABC-2 type transporter 515 717 2.2E-18 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ambt_00960 3b055efc0387ca7c26362e428da16c17 814 SMART SM00382 260 448 1.5E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_00960 3b055efc0387ca7c26362e428da16c17 814 SMART SM00240 153 203 1.6E-10 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_00960 3b055efc0387ca7c26362e428da16c17 814 SMART SM00240 28 78 0.0023 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_00960 3b055efc0387ca7c26362e428da16c17 814 Pfam PF00498 FHA domain 155 218 6.8E-16 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_00960 3b055efc0387ca7c26362e428da16c17 814 Pfam PF00498 FHA domain 29 93 2.0E-8 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_00960 3b055efc0387ca7c26362e428da16c17 814 SUPERFAMILY SSF49879 16 105 2.87E-15 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ambt_00960 3b055efc0387ca7c26362e428da16c17 814 Gene3D G3DSA:2.60.200.20 105 228 3.5E-22 T 13-10-2018 ambt_00960 3b055efc0387ca7c26362e428da16c17 814 Gene3D G3DSA:2.60.200.20 2 104 2.8E-12 T 13-10-2018 ambt_00960 3b055efc0387ca7c26362e428da16c17 814 ProSitePatterns PS00211 ABC transporters family signature. 373 387 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_00960 3b055efc0387ca7c26362e428da16c17 814 SUPERFAMILY SSF49879 126 225 1.89E-24 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ambt_00960 3b055efc0387ca7c26362e428da16c17 814 SUPERFAMILY SSF52540 233 464 1.11E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00960 3b055efc0387ca7c26362e428da16c17 814 Gene3D G3DSA:3.40.50.300 229 480 8.1E-61 T 13-10-2018 ambt_00960 3b055efc0387ca7c26362e428da16c17 814 Pfam PF00005 ABC transporter 251 401 3.0E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_19555 1f3740f819acd3319a549f6d497597c6 226 SMART SM00702 1 176 9.9E-10 T 13-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 ambt_19555 1f3740f819acd3319a549f6d497597c6 226 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 226 37.352 T 13-10-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 ambt_19555 1f3740f819acd3319a549f6d497597c6 226 Gene3D G3DSA:2.60.120.620 1 177 5.0E-40 T 13-10-2018 ambt_19555 1f3740f819acd3319a549f6d497597c6 226 Gene3D G3DSA:4.10.860.20 179 225 3.5E-10 T 13-10-2018 ambt_19555 1f3740f819acd3319a549f6d497597c6 226 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 83 175 1.8E-14 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 Gene3D G3DSA:1.10.220.30 101 206 1.4E-29 T 13-10-2018 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 13 344 4.0E-99 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 SUPERFAMILY SSF48029 13 129 1.83E-22 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 SUPERFAMILY SSF48029 127 338 3.14E-66 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 Pfam PF14842 FliG N-terminal domain 17 118 1.2E-29 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 Pfam PF14841 FliG middle domain 129 200 1.1E-26 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 127 150 3.8E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 261 281 3.8E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 47 73 3.8E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 208 233 3.8E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 285 311 3.8E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 239 259 3.8E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 PRINTS PR00954 Flagellar motor switch protein FliG signature 18 34 3.8E-58 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 PIRSF PIRSF003161 12 346 2.2E-115 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 Gene3D G3DSA:1.10.220.30 12 97 1.9E-19 T 13-10-2018 ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 Pfam PF01706 FliG C-terminal domain 231 337 7.1E-40 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal ambt_13285 5e90c66a12e299996d4cfb215f5916f9 346 Gene3D G3DSA:1.10.220.30 208 346 2.5E-42 T 13-10-2018 ambt_17305 9bafaf0321f2629a5d619290098d5c24 425 SUPERFAMILY SSF53474 73 335 4.23E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_17305 9bafaf0321f2629a5d619290098d5c24 425 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 40 154 3.1E-12 T 13-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 ambt_22230 186d05dafa6ad976de61607697ec34be 160 SUPERFAMILY SSF89963 88 160 6.8E-30 T 13-10-2018 IPR036183 YajQ-like superfamily ambt_22230 186d05dafa6ad976de61607697ec34be 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 27.684 T 13-10-2018 IPR007551 Protein of unknown function DUF520 ambt_22230 186d05dafa6ad976de61607697ec34be 160 Gene3D G3DSA:3.30.70.860 95 160 9.3E-30 T 13-10-2018 IPR035571 UPF0234-like, C-terminal ambt_22230 186d05dafa6ad976de61607697ec34be 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 2.6E-61 T 13-10-2018 IPR007551 Protein of unknown function DUF520 ambt_22230 186d05dafa6ad976de61607697ec34be 160 SUPERFAMILY SSF89963 2 82 1.46E-26 T 13-10-2018 IPR036183 YajQ-like superfamily ambt_22230 186d05dafa6ad976de61607697ec34be 160 Gene3D G3DSA:3.30.70.990 9 94 2.9E-24 T 13-10-2018 IPR035570 UPF0234, N-terminal ambt_17530 07de783f9a04dc507ef055a042a6f785 612 SMART SM00487 29 225 4.8E-29 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_17530 07de783f9a04dc507ef055a042a6f785 612 Pfam PF00271 Helicase conserved C-terminal domain 234 336 3.7E-21 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_17530 07de783f9a04dc507ef055a042a6f785 612 Pfam PF09382 RQC domain 412 521 2.4E-32 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 ambt_17530 07de783f9a04dc507ef055a042a6f785 612 Pfam PF16124 RecQ zinc-binding 349 410 1.6E-14 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain ambt_17530 07de783f9a04dc507ef055a042a6f785 612 SUPERFAMILY SSF46785 408 526 1.9E-37 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_17530 07de783f9a04dc507ef055a042a6f785 612 Gene3D G3DSA:1.10.150.80 529 612 1.8E-25 T 13-10-2018 ambt_17530 07de783f9a04dc507ef055a042a6f785 612 SUPERFAMILY SSF47819 534 610 3.71E-25 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 ambt_17530 07de783f9a04dc507ef055a042a6f785 612 Gene3D G3DSA:3.40.50.300 217 414 1.9E-61 T 13-10-2018 ambt_17530 07de783f9a04dc507ef055a042a6f785 612 Gene3D G3DSA:3.40.50.300 14 215 2.5E-77 T 13-10-2018 ambt_17530 07de783f9a04dc507ef055a042a6f785 612 SMART SM00341 534 612 2.3E-17 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ambt_17530 07de783f9a04dc507ef055a042a6f785 612 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 22 470 5.1E-169 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 ambt_17530 07de783f9a04dc507ef055a042a6f785 612 SMART SM00956 417 520 1.0E-43 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 ambt_17530 07de783f9a04dc507ef055a042a6f785 612 SMART SM00490 256 337 2.7E-28 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_17530 07de783f9a04dc507ef055a042a6f785 612 Pfam PF00270 DEAD/DEAH box helicase 36 192 9.9E-22 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_17530 07de783f9a04dc507ef055a042a6f785 612 SUPERFAMILY SSF52540 73 358 5.01E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_17530 07de783f9a04dc507ef055a042a6f785 612 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 22 606 1.4E-238 T 13-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 ambt_17530 07de783f9a04dc507ef055a042a6f785 612 Gene3D G3DSA:1.10.10.10 415 528 2.5E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_17530 07de783f9a04dc507ef055a042a6f785 612 Pfam PF00570 HRDC domain 539 604 1.5E-20 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ambt_00325 ac4e42d309bcb877fe0291a236b48fc9 609 Gene3D G3DSA:2.60.120.10 4 126 1.9E-8 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_00325 ac4e42d309bcb877fe0291a236b48fc9 609 SUPERFAMILY SSF54631 153 267 3.03E-28 T 13-10-2018 ambt_00325 ac4e42d309bcb877fe0291a236b48fc9 609 SUPERFAMILY SSF51206 6 116 4.68E-10 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like ambt_00325 ac4e42d309bcb877fe0291a236b48fc9 609 SMART SM00116 155 202 5.2E-7 T 13-10-2018 IPR000644 CBS domain ambt_00325 ac4e42d309bcb877fe0291a236b48fc9 609 SMART SM00116 219 268 8.7E-9 T 13-10-2018 IPR000644 CBS domain ambt_00325 ac4e42d309bcb877fe0291a236b48fc9 609 Gene3D G3DSA:3.10.580.10 127 274 1.3E-32 T 13-10-2018 ambt_00325 ac4e42d309bcb877fe0291a236b48fc9 609 Pfam PF00571 CBS domain 160 201 1.8E-8 T 13-10-2018 IPR000644 CBS domain ambt_00325 ac4e42d309bcb877fe0291a236b48fc9 609 Pfam PF00571 CBS domain 212 266 1.3E-11 T 13-10-2018 IPR000644 CBS domain ambt_00325 ac4e42d309bcb877fe0291a236b48fc9 609 Pfam PF03445 Putative nucleotidyltransferase DUF294 294 428 2.0E-35 T 13-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 ambt_00325 ac4e42d309bcb877fe0291a236b48fc9 609 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 465 600 1.4E-33 T 13-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding ambt_08315 b7a910538fe3d14fb9f9f95d8aa1f54f 274 Gene3D G3DSA:3.40.250.10 151 274 9.2E-40 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_08315 b7a910538fe3d14fb9f9f95d8aa1f54f 274 ProSitePatterns PS00683 Rhodanese C-terminal signature. 253 263 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 ambt_08315 b7a910538fe3d14fb9f9f95d8aa1f54f 274 SUPERFAMILY SSF52821 3 131 2.1E-24 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_08315 b7a910538fe3d14fb9f9f95d8aa1f54f 274 SUPERFAMILY SSF52821 161 273 3.4E-33 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_08315 b7a910538fe3d14fb9f9f95d8aa1f54f 274 Gene3D G3DSA:3.40.250.10 1 146 1.1E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_08315 b7a910538fe3d14fb9f9f95d8aa1f54f 274 Pfam PF00581 Rhodanese-like domain 41 124 9.5E-8 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_08315 b7a910538fe3d14fb9f9f95d8aa1f54f 274 Pfam PF00581 Rhodanese-like domain 156 265 1.1E-9 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_08315 b7a910538fe3d14fb9f9f95d8aa1f54f 274 SMART SM00450 5 128 2.9E-9 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_08315 b7a910538fe3d14fb9f9f95d8aa1f54f 274 SMART SM00450 150 269 2.2E-13 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_07625 5fede9cbba57a80b8d9d96417541592a 1038 Pfam PF00593 TonB dependent receptor 493 1037 3.0E-26 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_07625 5fede9cbba57a80b8d9d96417541592a 1038 Pfam PF07715 TonB-dependent Receptor Plug Domain 93 189 2.7E-11 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_07625 5fede9cbba57a80b8d9d96417541592a 1038 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 67 1037 6.3E-171 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor ambt_07625 5fede9cbba57a80b8d9d96417541592a 1038 Gene3D G3DSA:2.170.130.10 81 193 6.7E-13 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_07625 5fede9cbba57a80b8d9d96417541592a 1038 SUPERFAMILY SSF56935 64 1037 5.04E-74 T 13-10-2018 ambt_10060 b1a2ceafcf9c30880440cfc942eedd63 300 Gene3D G3DSA:1.10.10.10 3 88 3.3E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_10060 b1a2ceafcf9c30880440cfc942eedd63 300 SUPERFAMILY SSF46785 4 85 1.47E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_10060 b1a2ceafcf9c30880440cfc942eedd63 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.6E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_10060 b1a2ceafcf9c30880440cfc942eedd63 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.6E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_10060 b1a2ceafcf9c30880440cfc942eedd63 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.6E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_10060 b1a2ceafcf9c30880440cfc942eedd63 300 Pfam PF03466 LysR substrate binding domain 90 292 2.6E-36 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_10060 b1a2ceafcf9c30880440cfc942eedd63 300 SUPERFAMILY SSF53850 90 295 2.33E-39 T 13-10-2018 ambt_10060 b1a2ceafcf9c30880440cfc942eedd63 300 Gene3D G3DSA:3.40.190.290 91 291 2.3E-52 T 13-10-2018 ambt_10060 b1a2ceafcf9c30880440cfc942eedd63 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.3E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_12910 7b68df60a020ea14936f9ab844f7985d 420 Pfam PF13432 Tetratricopeptide repeat 304 359 5.3E-5 T 13-10-2018 ambt_12910 7b68df60a020ea14936f9ab844f7985d 420 SUPERFAMILY SSF81901 60 189 7.85E-8 T 13-10-2018 ambt_12910 7b68df60a020ea14936f9ab844f7985d 420 SMART SM00028 332 364 190.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12910 7b68df60a020ea14936f9ab844f7985d 420 SMART SM00028 298 331 0.4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12910 7b68df60a020ea14936f9ab844f7985d 420 SMART SM00028 158 191 0.12 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12910 7b68df60a020ea14936f9ab844f7985d 420 SUPERFAMILY SSF48452 156 360 2.72E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12910 7b68df60a020ea14936f9ab844f7985d 420 Gene3D G3DSA:1.25.40.10 79 256 3.2E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12910 7b68df60a020ea14936f9ab844f7985d 420 Gene3D G3DSA:1.25.40.10 257 397 1.3E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_18200 094937c5676448b1e0bd8823e3897dbc 238 Pfam PF07386 Protein of unknown function (DUF1499) 96 231 4.6E-29 T 13-10-2018 IPR010865 Protein of unknown function DUF1499 ambt_05665 9ebbcfc01e7092570bc51d6cf7f2f481 499 Gene3D G3DSA:1.20.1250.20 273 496 6.6E-9 T 13-10-2018 ambt_05665 9ebbcfc01e7092570bc51d6cf7f2f481 499 SUPERFAMILY SSF103473 11 479 3.01E-24 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_05665 9ebbcfc01e7092570bc51d6cf7f2f481 499 Pfam PF07690 Major Facilitator Superfamily 18 241 1.4E-13 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_05665 9ebbcfc01e7092570bc51d6cf7f2f481 499 Gene3D G3DSA:1.20.1250.20 10 196 1.5E-13 T 13-10-2018 ambt_04805 26a40894017f2c15268789f47cdb06c7 236 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 236 145.696 T 13-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 ambt_04805 26a40894017f2c15268789f47cdb06c7 236 SMART SM00345 12 71 5.8E-24 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_04805 26a40894017f2c15268789f47cdb06c7 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 6.1E-21 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_04805 26a40894017f2c15268789f47cdb06c7 236 Gene3D G3DSA:1.10.10.10 1 79 4.9E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_04805 26a40894017f2c15268789f47cdb06c7 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_04805 26a40894017f2c15268789f47cdb06c7 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_04805 26a40894017f2c15268789f47cdb06c7 236 SUPERFAMILY SSF48008 79 230 7.72E-54 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_04805 26a40894017f2c15268789f47cdb06c7 236 Gene3D G3DSA:1.20.120.530 80 235 2.1E-37 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_04805 26a40894017f2c15268789f47cdb06c7 236 Pfam PF07840 FadR C-terminal domain 72 234 7.9E-65 T 13-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 ambt_04805 26a40894017f2c15268789f47cdb06c7 236 SUPERFAMILY SSF46785 11 87 6.15E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_04805 26a40894017f2c15268789f47cdb06c7 236 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 5.3E-112 T 13-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 ambt_12480 831d817f8df3bff49611f6337f45966f 218 PIRSF PIRSF006293 1 218 6.0E-78 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ambt_12480 831d817f8df3bff49611f6337f45966f 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 202 7.7E-64 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ambt_12480 831d817f8df3bff49611f6337f45966f 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 3 215 50.336 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ambt_12480 831d817f8df3bff49611f6337f45966f 218 Pfam PF06508 Queuosine biosynthesis protein QueC 5 209 1.7E-67 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ambt_12480 831d817f8df3bff49611f6337f45966f 218 SUPERFAMILY SSF52402 3 217 1.15E-62 T 13-10-2018 ambt_12480 831d817f8df3bff49611f6337f45966f 218 Gene3D G3DSA:3.40.50.620 2 214 5.3E-73 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_00665 a7bb550ce3be1eb239e4a39c47ba41d6 428 SUPERFAMILY SSF50182 193 260 1.14E-11 T 13-10-2018 IPR010920 LSM domain superfamily ambt_00665 a7bb550ce3be1eb239e4a39c47ba41d6 428 Pfam PF00924 Mechanosensitive ion channel 154 403 6.0E-42 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ambt_15510 0a13b106e8b1755c2eabb854da178c3c 287 SUPERFAMILY SSF51261 46 282 8.89E-49 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_15510 0a13b106e8b1755c2eabb854da178c3c 287 Pfam PF01476 LysM domain 46 88 3.1E-11 T 13-10-2018 IPR018392 LysM domain ambt_15510 0a13b106e8b1755c2eabb854da178c3c 287 Gene3D G3DSA:2.70.70.10 148 283 3.7E-36 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_15510 0a13b106e8b1755c2eabb854da178c3c 287 Pfam PF01551 Peptidase family M23 185 278 1.1E-28 T 13-10-2018 IPR016047 Peptidase M23 ambt_15510 0a13b106e8b1755c2eabb854da178c3c 287 Gene3D G3DSA:3.10.350.10 44 88 2.7E-13 T 13-10-2018 IPR036779 LysM domain superfamily ambt_15510 0a13b106e8b1755c2eabb854da178c3c 287 SMART SM00257 45 89 5.6E-11 T 13-10-2018 IPR018392 LysM domain ambt_12890 632ca69a735a53a77dfb4b8e98ea3944 92 SUPERFAMILY SSF89957 1 79 6.12E-18 T 13-10-2018 IPR029756 MTH1187/YkoF-like ambt_12890 632ca69a735a53a77dfb4b8e98ea3944 92 Pfam PF07615 YKOF-related Family 5 67 1.6E-4 T 13-10-2018 IPR011522 Thiamin/hydroxymethyl pyrimidine-binding YkoF, putative ambt_12890 632ca69a735a53a77dfb4b8e98ea3944 92 Gene3D G3DSA:3.30.70.930 1 77 2.4E-11 T 13-10-2018 IPR029756 MTH1187/YkoF-like ambt_02060 179b9c6f17d0215499a5cac4d9966563 188 Pfam PF02622 Uncharacterized ACR, COG1678 16 175 1.8E-50 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 ambt_02060 179b9c6f17d0215499a5cac4d9966563 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 5 188 37.969 T 13-10-2018 IPR003774 Protein of unknown function UPF0301 ambt_02060 179b9c6f17d0215499a5cac4d9966563 188 Gene3D G3DSA:3.40.1740.10 3 188 3.1E-68 T 13-10-2018 ambt_02060 179b9c6f17d0215499a5cac4d9966563 188 SUPERFAMILY SSF143456 5 188 1.13E-66 T 13-10-2018 ambt_09175 e7523855d4e22d6b71f4a8f1dec899a0 967 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 159 7.7E-12 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_09175 e7523855d4e22d6b71f4a8f1dec899a0 967 SUPERFAMILY SSF56935 23 967 1.83E-71 T 13-10-2018 ambt_09175 e7523855d4e22d6b71f4a8f1dec899a0 967 Gene3D G3DSA:2.170.130.10 46 163 5.5E-12 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_09175 e7523855d4e22d6b71f4a8f1dec899a0 967 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 39 967 1.5E-140 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor ambt_07555 57a9f79e0a73e9208a219b21df1bc88f 124 PIRSF PIRSF000178 1 124 1.7E-29 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07555 57a9f79e0a73e9208a219b21df1bc88f 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 2 119 1.2E-29 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07555 57a9f79e0a73e9208a219b21df1bc88f 124 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 80 93 - T 13-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07555 57a9f79e0a73e9208a219b21df1bc88f 124 Gene3D G3DSA:1.20.1300.10 1 124 5.1E-40 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07555 57a9f79e0a73e9208a219b21df1bc88f 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 3 121 2.1E-40 T 13-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07555 57a9f79e0a73e9208a219b21df1bc88f 124 SUPERFAMILY SSF81343 2 122 7.03E-33 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07555 57a9f79e0a73e9208a219b21df1bc88f 124 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 13-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_05050 6f9e65dd23294e90e795821adf910638 338 SMART SM00859 6 121 3.0E-42 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ambt_05050 6f9e65dd23294e90e795821adf910638 338 Gene3D G3DSA:3.40.50.720 7 331 2.5E-145 T 13-10-2018 ambt_05050 6f9e65dd23294e90e795821adf910638 338 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 119 1.4E-30 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ambt_05050 6f9e65dd23294e90e795821adf910638 338 Gene3D G3DSA:3.30.360.10 130 317 2.5E-145 T 13-10-2018 ambt_05050 6f9e65dd23294e90e795821adf910638 338 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 1.9E-62 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ambt_05050 6f9e65dd23294e90e795821adf910638 338 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 335 1.4E-134 T 13-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ambt_05050 6f9e65dd23294e90e795821adf910638 338 PIRSF PIRSF000148 4 338 3.2E-135 T 13-10-2018 ambt_05050 6f9e65dd23294e90e795821adf910638 338 SUPERFAMILY SSF55347 131 321 1.85E-77 T 13-10-2018 ambt_05050 6f9e65dd23294e90e795821adf910638 338 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 334 37.034 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ambt_05050 6f9e65dd23294e90e795821adf910638 338 SUPERFAMILY SSF51735 5 159 1.06E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_19265 6a87888cf201edbb055054ecc33280a0 678 Gene3D G3DSA:1.10.1370.40 15 673 1.9E-259 T 13-10-2018 ambt_19265 6a87888cf201edbb055054ecc33280a0 678 SUPERFAMILY SSF55486 8 675 3.14E-201 T 13-10-2018 ambt_19265 6a87888cf201edbb055054ecc33280a0 678 Gene3D G3DSA:1.10.1370.10 140 608 1.9E-259 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ambt_19265 6a87888cf201edbb055054ecc33280a0 678 Pfam PF01432 Peptidase family M3 222 675 4.8E-153 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 ambt_07560 37b90271ea2d2e0be2f2e38339ec68ff 115 PIRSF PIRSF000169 1 115 4.2E-36 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 ambt_07560 37b90271ea2d2e0be2f2e38339ec68ff 115 Gene3D G3DSA:1.20.1300.10 1 115 1.3E-24 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07560 37b90271ea2d2e0be2f2e38339ec68ff 115 SUPERFAMILY SSF81343 5 115 5.67E-25 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07560 37b90271ea2d2e0be2f2e38339ec68ff 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 6.6E-29 T 13-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 ambt_18675 a2a9e091115ae28d89680138d35180a9 813 Gene3D G3DSA:3.20.20.450 549 803 3.3E-93 T 13-10-2018 IPR035919 EAL domain superfamily ambt_18675 a2a9e091115ae28d89680138d35180a9 813 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 371 533 4.3E-45 T 13-10-2018 IPR000160 GGDEF domain ambt_18675 a2a9e091115ae28d89680138d35180a9 813 Pfam PF00990 Diguanylate cyclase, GGDEF domain 375 529 4.7E-49 T 13-10-2018 IPR000160 GGDEF domain ambt_18675 a2a9e091115ae28d89680138d35180a9 813 SUPERFAMILY SSF55073 380 537 6.36E-47 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_18675 a2a9e091115ae28d89680138d35180a9 813 Pfam PF00563 EAL domain 552 787 2.1E-72 T 13-10-2018 IPR001633 EAL domain ambt_18675 a2a9e091115ae28d89680138d35180a9 813 SMART SM00267 364 536 2.0E-57 T 13-10-2018 IPR000160 GGDEF domain ambt_18675 a2a9e091115ae28d89680138d35180a9 813 SUPERFAMILY SSF141868 555 805 2.62E-87 T 13-10-2018 IPR035919 EAL domain superfamily ambt_18675 a2a9e091115ae28d89680138d35180a9 813 Gene3D G3DSA:3.30.70.270 369 548 1.3E-57 T 13-10-2018 ambt_18675 a2a9e091115ae28d89680138d35180a9 813 SMART SM00052 546 792 8.0E-102 T 13-10-2018 IPR001633 EAL domain ambt_18675 a2a9e091115ae28d89680138d35180a9 813 Pfam PF14827 Double sensory domain of two-component sensor kinase 37 268 2.2E-41 T 13-10-2018 IPR029150 Double Cache domain 3 ambt_05600 252f73db70040329e52362bf02cf88d8 210 SUPERFAMILY SSF53448 1 197 2.7E-19 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_05600 252f73db70040329e52362bf02cf88d8 210 Gene3D G3DSA:3.90.550.10 1 205 9.5E-30 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_05600 252f73db70040329e52362bf02cf88d8 210 Pfam PF12804 MobA-like NTP transferase domain 5 133 1.3E-22 T 13-10-2018 IPR025877 MobA-like NTP transferase ambt_07605 c55ee7e86ab1eae9197232873ecb8b9c 97 Gene3D G3DSA:1.10.10.60 8 89 1.9E-14 T 13-10-2018 ambt_07605 c55ee7e86ab1eae9197232873ecb8b9c 97 SUPERFAMILY SSF46689 3 95 5.55E-23 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_07605 c55ee7e86ab1eae9197232873ecb8b9c 97 Pfam PF01527 Transposase 1 75 3.1E-17 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ambt_14490 c55ee7e86ab1eae9197232873ecb8b9c 97 Gene3D G3DSA:1.10.10.60 8 89 1.9E-14 T 13-10-2018 ambt_14490 c55ee7e86ab1eae9197232873ecb8b9c 97 SUPERFAMILY SSF46689 3 95 5.55E-23 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_14490 c55ee7e86ab1eae9197232873ecb8b9c 97 Pfam PF01527 Transposase 1 75 3.1E-17 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ambt_01645 296e6656df01c46597c278508bcc3ac8 134 SMART SM00450 33 130 1.1E-19 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_01645 296e6656df01c46597c278508bcc3ac8 134 Gene3D G3DSA:3.40.250.10 20 133 9.0E-28 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_01645 296e6656df01c46597c278508bcc3ac8 134 SUPERFAMILY SSF52821 13 131 8.64E-30 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_01645 296e6656df01c46597c278508bcc3ac8 134 Pfam PF00581 Rhodanese-like domain 40 126 1.9E-18 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_17125 d6497da08f722034f9d5c6a625f20f9a 272 Gene3D G3DSA:3.60.110.10 1 270 3.6E-81 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ambt_17125 d6497da08f722034f9d5c6a625f20f9a 272 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 152 172 - T 13-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site ambt_17125 d6497da08f722034f9d5c6a625f20f9a 272 SUPERFAMILY SSF56317 2 264 7.59E-69 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ambt_17125 d6497da08f722034f9d5c6a625f20f9a 272 Pfam PF00795 Carbon-nitrogen hydrolase 6 257 1.2E-47 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ambt_13380 8e3f0054bbad85c54c55f700db635deb 233 Pfam PF08889 WbqC-like protein family 8 219 1.5E-84 T 13-10-2018 IPR014985 WbqC-like protein family ambt_11090 6ac894c91cdffffcd000686ec6e80651 675 SUPERFAMILY SSF54001 277 567 6.87E-47 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ambt_11090 6ac894c91cdffffcd000686ec6e80651 675 Gene3D G3DSA:3.10.620.30 333 502 9.4E-22 T 13-10-2018 ambt_11090 6ac894c91cdffffcd000686ec6e80651 675 Pfam PF11992 Domain of unknown function (DUF3488) 8 331 8.4E-74 T 13-10-2018 IPR021878 Protein of unknown function DUF3488 ambt_11090 6ac894c91cdffffcd000686ec6e80651 675 SMART SM00460 407 476 8.1E-16 T 13-10-2018 IPR002931 Transglutaminase-like ambt_11090 6ac894c91cdffffcd000686ec6e80651 675 Pfam PF01841 Transglutaminase-like superfamily 361 474 4.5E-20 T 13-10-2018 IPR002931 Transglutaminase-like ambt_06700 da7b3072ff335bbbb9fb2836b06a76e2 324 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 248 297 1.4E-4 T 13-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_06700 da7b3072ff335bbbb9fb2836b06a76e2 324 SUPERFAMILY SSF55120 9 243 6.04E-75 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_06700 da7b3072ff335bbbb9fb2836b06a76e2 324 Gene3D G3DSA:3.30.2350.10 1 245 1.4E-86 T 13-10-2018 ambt_06700 da7b3072ff335bbbb9fb2836b06a76e2 324 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 5.8E-79 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_06700 da7b3072ff335bbbb9fb2836b06a76e2 324 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 8.6E-55 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 ambt_06700 da7b3072ff335bbbb9fb2836b06a76e2 324 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 244 6.3E-19 T 13-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 ambt_06700 da7b3072ff335bbbb9fb2836b06a76e2 324 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 320 17.265 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_16080 8f40f2036e17fd67bb2b1d769766e9c3 268 Gene3D G3DSA:3.40.1160.10 2 252 5.3E-60 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_16080 8f40f2036e17fd67bb2b1d769766e9c3 268 SUPERFAMILY SSF53633 3 255 8.9E-54 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_16080 8f40f2036e17fd67bb2b1d769766e9c3 268 PIRSF PIRSF000728 1 255 1.3E-59 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ambt_16080 8f40f2036e17fd67bb2b1d769766e9c3 268 Pfam PF00696 Amino acid kinase family 6 235 4.0E-40 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ambt_16080 8f40f2036e17fd67bb2b1d769766e9c3 268 Hamap MF_00082 Acetylglutamate kinase [argB]. 3 251 38.359 T 13-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ambt_16080 8f40f2036e17fd67bb2b1d769766e9c3 268 TIGRFAM TIGR00761 argB: acetylglutamate kinase 6 231 3.5E-55 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ambt_07950 75c921d907715f938cb8ca6f7dd86f44 509 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.4E-48 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ambt_07950 75c921d907715f938cb8ca6f7dd86f44 509 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 1.1E-61 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ambt_07950 75c921d907715f938cb8ca6f7dd86f44 509 Pfam PF05683 Fumarase C-terminus 289 491 8.5E-84 T 13-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ambt_07950 75c921d907715f938cb8ca6f7dd86f44 509 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.3E-97 T 13-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ambt_07950 75c921d907715f938cb8ca6f7dd86f44 509 PIRSF PIRSF001394 1 507 1.6E-216 T 13-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 ambt_07950 75c921d907715f938cb8ca6f7dd86f44 509 Gene3D G3DSA:3.20.130.10 309 491 1.9E-60 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 ambt_07950 75c921d907715f938cb8ca6f7dd86f44 509 SUPERFAMILY SSF117457 317 490 3.01E-63 T 13-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 ambt_13770 0528da2e2b8483ca800f98a9fecb88aa 142 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 26 113 5.0E-13 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ambt_13770 0528da2e2b8483ca800f98a9fecb88aa 142 Gene3D G3DSA:2.170.150.70 4 121 1.8E-12 T 13-10-2018 ambt_13770 0528da2e2b8483ca800f98a9fecb88aa 142 SUPERFAMILY SSF51316 4 131 9.73E-30 T 13-10-2018 IPR011057 Mss4-like superfamily ambt_03640 2cff37f30095c91addd85fdd71717e05 372 Gene3D G3DSA:3.40.50.2000 185 357 3.0E-50 T 13-10-2018 ambt_03640 2cff37f30095c91addd85fdd71717e05 372 Pfam PF00534 Glycosyl transferases group 1 203 353 1.2E-27 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_03640 2cff37f30095c91addd85fdd71717e05 372 SUPERFAMILY SSF53756 22 371 9.42E-61 T 13-10-2018 ambt_03640 2cff37f30095c91addd85fdd71717e05 372 Gene3D G3DSA:3.40.50.2000 76 365 3.0E-50 T 13-10-2018 ambt_16295 aa6abcd9b675498880db81bf3efdd465 218 Gene3D G3DSA:1.10.357.10 71 207 4.9E-26 T 13-10-2018 ambt_16295 aa6abcd9b675498880db81bf3efdd465 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 5.1E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_16295 aa6abcd9b675498880db81bf3efdd465 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 5.1E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_16295 aa6abcd9b675498880db81bf3efdd465 218 SUPERFAMILY SSF46689 11 71 3.84E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_16295 aa6abcd9b675498880db81bf3efdd465 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 67 1.4E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_16295 aa6abcd9b675498880db81bf3efdd465 218 Gene3D G3DSA:1.10.10.60 3 66 2.5E-18 T 13-10-2018 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 31 425 2.4E-157 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 Gene3D G3DSA:3.40.50.1980 28 231 6.4E-116 T 13-10-2018 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 PIRSF PIRSF000099 2 429 1.1E-159 T 13-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 SUPERFAMILY SSF53720 6 431 6.08E-85 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 426 39.78 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 PRINTS PR00083 Histidinol dehydrogenase signature 229 250 4.3E-97 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 PRINTS PR00083 Histidinol dehydrogenase signature 167 193 4.3E-97 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 PRINTS PR00083 Histidinol dehydrogenase signature 360 378 4.3E-97 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 PRINTS PR00083 Histidinol dehydrogenase signature 197 222 4.3E-97 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 PRINTS PR00083 Histidinol dehydrogenase signature 132 158 4.3E-97 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 PRINTS PR00083 Histidinol dehydrogenase signature 251 270 4.3E-97 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 PRINTS PR00083 Histidinol dehydrogenase signature 319 344 4.3E-97 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 PRINTS PR00083 Histidinol dehydrogenase signature 31 55 4.3E-97 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 Gene3D G3DSA:3.40.50.1980 233 348 6.4E-116 T 13-10-2018 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 229 261 - T 13-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 ambt_04670 1e0ce2fc37baff425f17caa36b216a7f 438 Pfam PF00815 Histidinol dehydrogenase 22 426 1.0E-161 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ambt_17990 80a253e5b82bb47c6e8ff87d8554b86d 213 SUPERFAMILY SSF52833 1 89 6.23E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_17990 80a253e5b82bb47c6e8ff87d8554b86d 213 Gene3D G3DSA:3.40.30.10 1 88 2.6E-23 T 13-10-2018 ambt_17990 80a253e5b82bb47c6e8ff87d8554b86d 213 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 210 3.7E-81 T 13-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 ambt_17990 80a253e5b82bb47c6e8ff87d8554b86d 213 SUPERFAMILY SSF47616 82 211 1.67E-32 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_17990 80a253e5b82bb47c6e8ff87d8554b86d 213 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 74 5.3E-15 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_17990 80a253e5b82bb47c6e8ff87d8554b86d 213 Pfam PF14497 Glutathione S-transferase, C-terminal domain 122 200 1.7E-6 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_17990 80a253e5b82bb47c6e8ff87d8554b86d 213 Gene3D G3DSA:1.20.1050.10 89 213 6.3E-50 T 13-10-2018 ambt_14915 b173a36775e8288ea3118af632e91421 269 Gene3D G3DSA:2.60.120.620 74 267 1.7E-50 T 13-10-2018 ambt_14915 b173a36775e8288ea3118af632e91421 269 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 163 266 1.9E-16 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ambt_14915 b173a36775e8288ea3118af632e91421 269 SMART SM00702 86 266 3.4E-24 T 13-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 ambt_19500 17288ff3d036f66bf3277751023fff1f 165 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 135 3.0E-41 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ambt_19500 17288ff3d036f66bf3277751023fff1f 165 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 135 3.7E-36 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ambt_19500 17288ff3d036f66bf3277751023fff1f 165 SUPERFAMILY SSF55083 5 156 3.53E-51 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ambt_19500 17288ff3d036f66bf3277751023fff1f 165 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 91 102 - T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ambt_19500 17288ff3d036f66bf3277751023fff1f 165 Gene3D G3DSA:3.30.70.560 5 161 1.7E-55 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ambt_02545 3f1a9ea49b7e430337637a400998f467 686 Pfam PF00326 Prolyl oligopeptidase family 442 652 2.9E-40 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ambt_02545 3f1a9ea49b7e430337637a400998f467 686 SUPERFAMILY SSF53474 390 652 4.12E-62 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_02545 3f1a9ea49b7e430337637a400998f467 686 Gene3D G3DSA:3.40.50.1820 360 663 6.2E-70 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_02545 3f1a9ea49b7e430337637a400998f467 686 SUPERFAMILY SSF69304 52 265 3.14E-10 T 13-10-2018 ambt_02545 3f1a9ea49b7e430337637a400998f467 686 Gene3D G3DSA:2.120.10.30 38 267 4.1E-13 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_13115 911fa5efcd1111fc78d1bc98d6ab3ff6 804 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 147 1.1E-8 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_13115 911fa5efcd1111fc78d1bc98d6ab3ff6 804 SUPERFAMILY SSF56935 25 804 1.83E-76 T 13-10-2018 ambt_13115 911fa5efcd1111fc78d1bc98d6ab3ff6 804 Gene3D G3DSA:2.170.130.10 46 170 1.3E-12 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_13115 911fa5efcd1111fc78d1bc98d6ab3ff6 804 Pfam PF00593 TonB dependent receptor 388 802 1.5E-27 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_13115 911fa5efcd1111fc78d1bc98d6ab3ff6 804 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 787 804 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site ambt_02610 56f96e67622b8fba1f46f5e65c523185 102 Pfam PF06906 Protein of unknown function (DUF1272) 1 57 3.0E-28 T 13-10-2018 IPR010696 Protein of unknown function DUF1272 ambt_13155 46915daf990302493d9961c96be7050b 355 SUPERFAMILY SSF82282 12 354 9.29E-106 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ambt_13155 46915daf990302493d9961c96be7050b 355 Gene3D G3DSA:3.20.20.330 6 344 1.9E-128 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ambt_13155 46915daf990302493d9961c96be7050b 355 Pfam PF02574 Homocysteine S-methyltransferase 22 330 1.5E-83 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ambt_04490 143180671d6ad322a93b2c2a6f8a6c05 277 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 53 75 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ambt_04490 143180671d6ad322a93b2c2a6f8a6c05 277 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 19 179 4.4E-35 T 13-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 ambt_04490 143180671d6ad322a93b2c2a6f8a6c05 277 Gene3D G3DSA:1.20.120.1760 7 134 2.0E-16 T 13-10-2018 ambt_04490 143180671d6ad322a93b2c2a6f8a6c05 277 Pfam PF01066 CDP-alcohol phosphatidyltransferase 12 75 9.8E-16 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ambt_19160 202d6f2f1cb5c7ec7fd38375656768d1 214 SMART SM00671 76 111 6.9 T 13-10-2018 IPR006597 Sel1-like repeat ambt_19160 202d6f2f1cb5c7ec7fd38375656768d1 214 SMART SM00671 112 147 5.4E-6 T 13-10-2018 IPR006597 Sel1-like repeat ambt_19160 202d6f2f1cb5c7ec7fd38375656768d1 214 SMART SM00671 148 183 48.0 T 13-10-2018 IPR006597 Sel1-like repeat ambt_19160 202d6f2f1cb5c7ec7fd38375656768d1 214 Gene3D G3DSA:1.25.40.10 19 214 1.3E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_19160 202d6f2f1cb5c7ec7fd38375656768d1 214 SUPERFAMILY SSF81901 70 191 4.84E-19 T 13-10-2018 ambt_03750 9de427e2ec9022d34ee257f9d63ace9f 179 SUPERFAMILY SSF144091 10 178 2.88E-24 T 13-10-2018 ambt_03750 9de427e2ec9022d34ee257f9d63ace9f 179 Pfam PF01694 Rhomboid family 48 178 1.2E-19 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ambt_03750 9de427e2ec9022d34ee257f9d63ace9f 179 Gene3D G3DSA:1.20.1540.10 7 178 3.9E-12 T 13-10-2018 IPR035952 Rhomboid-like superfamily ambt_11020 f74cabaf24e9fd3c4d98642f688562a5 167 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 20 142 6.0E-26 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ambt_11020 f74cabaf24e9fd3c4d98642f688562a5 167 Gene3D G3DSA:2.70.70.10 8 166 1.7E-25 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_11020 f74cabaf24e9fd3c4d98642f688562a5 167 SUPERFAMILY SSF51261 12 164 2.62E-27 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_00090 d8723ea95e8e084321819d020b2052c6 459 Gene3D G3DSA:3.30.70.1450 367 458 3.4E-29 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 SUPERFAMILY SSF51735 233 376 1.1E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_00090 d8723ea95e8e084321819d020b2052c6 459 Gene3D G3DSA:3.30.70.1450 140 232 9.9E-21 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 SUPERFAMILY SSF116726 362 437 1.27E-8 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 Gene3D G3DSA:3.40.50.720 2 139 5.1E-49 T 13-10-2018 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 SUPERFAMILY SSF116726 147 226 4.58E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 Pfam PF02080 TrkA-C domain 391 449 1.5E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 Pfam PF02080 TrkA-C domain 156 225 1.2E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 Gene3D G3DSA:3.40.50.720 233 366 4.3E-36 T 13-10-2018 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 Pfam PF02254 TrkA-N domain 3 125 8.9E-29 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 Pfam PF02254 TrkA-N domain 235 350 2.1E-23 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.1E-31 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.1E-31 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.1E-31 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.1E-31 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.1E-31 T 13-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 ambt_00090 d8723ea95e8e084321819d020b2052c6 459 SUPERFAMILY SSF51735 1 151 1.64E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_01215 46e129b2114a6a5b96c34bff3d91745c 547 Gene3D G3DSA:3.30.70.270 327 516 8.8E-47 T 13-10-2018 ambt_01215 46e129b2114a6a5b96c34bff3d91745c 547 SMART SM00267 321 512 7.8E-40 T 13-10-2018 IPR000160 GGDEF domain ambt_01215 46e129b2114a6a5b96c34bff3d91745c 547 SUPERFAMILY SSF55073 337 510 1.33E-36 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_01215 46e129b2114a6a5b96c34bff3d91745c 547 SUPERFAMILY SSF48452 2 150 1.31E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_01215 46e129b2114a6a5b96c34bff3d91745c 547 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 329 510 1.9E-39 T 13-10-2018 IPR000160 GGDEF domain ambt_01215 46e129b2114a6a5b96c34bff3d91745c 547 Pfam PF00990 Diguanylate cyclase, GGDEF domain 333 507 2.4E-35 T 13-10-2018 IPR000160 GGDEF domain ambt_01215 46e129b2114a6a5b96c34bff3d91745c 547 Gene3D G3DSA:1.25.40.10 1 272 3.5E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_09615 d394ae0135ac8d5cd2127fdc2173491d 72 Pfam PF17283 SprT-like zinc ribbon domain 31 66 2.8E-9 T 13-10-2018 IPR035240 SprT-like, zinc ribbon domain ambt_21325 0091eddf4719cb7226bb318f1c55001b 225 Pfam PF13817 IS66 C-terminal element 164 200 2.2E-11 T 13-10-2018 IPR039552 Transposase IS66, C-terminal ambt_21325 0091eddf4719cb7226bb318f1c55001b 225 Pfam PF03050 Transposase IS66 family 3 157 1.8E-34 T 13-10-2018 IPR004291 Transposase, IS66 ambt_00975 eea4c485b6ac9e7e6f0e1728fa3bc4be 579 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 160 172 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 ambt_00975 eea4c485b6ac9e7e6f0e1728fa3bc4be 579 Gene3D G3DSA:3.30.200.20 10 119 9.4E-52 T 13-10-2018 ambt_00975 eea4c485b6ac9e7e6f0e1728fa3bc4be 579 SUPERFAMILY SSF56112 16 373 4.05E-55 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_00975 eea4c485b6ac9e7e6f0e1728fa3bc4be 579 Gene3D G3DSA:1.10.510.10 120 300 9.4E-52 T 13-10-2018 ambt_00975 eea4c485b6ac9e7e6f0e1728fa3bc4be 579 SMART SM00220 19 299 1.6E-30 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ambt_00975 eea4c485b6ac9e7e6f0e1728fa3bc4be 579 Pfam PF00069 Protein kinase domain 19 290 6.0E-40 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ambt_00975 eea4c485b6ac9e7e6f0e1728fa3bc4be 579 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 25 48 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 ambt_20690 0b048b186a8c2a59851000c3eae37dfb 297 Pfam PF00196 Bacterial regulatory proteins, luxR family 237 291 1.7E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_20690 0b048b186a8c2a59851000c3eae37dfb 297 Gene3D G3DSA:3.40.50.12740 7 162 5.1E-40 T 13-10-2018 ambt_20690 0b048b186a8c2a59851000c3eae37dfb 297 Pfam PF00072 Response regulator receiver domain 8 118 4.2E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_20690 0b048b186a8c2a59851000c3eae37dfb 297 SMART SM00448 6 117 2.3E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_20690 0b048b186a8c2a59851000c3eae37dfb 297 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 251 267 1.8E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_20690 0b048b186a8c2a59851000c3eae37dfb 297 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 267 279 1.8E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_20690 0b048b186a8c2a59851000c3eae37dfb 297 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 237 251 1.8E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_20690 0b048b186a8c2a59851000c3eae37dfb 297 SUPERFAMILY SSF52172 8 129 2.85E-39 T 13-10-2018 IPR011006 CheY-like superfamily ambt_20690 0b048b186a8c2a59851000c3eae37dfb 297 Gene3D G3DSA:1.10.10.10 231 295 2.3E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_20690 0b048b186a8c2a59851000c3eae37dfb 297 SMART SM00421 234 291 6.6E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_20690 0b048b186a8c2a59851000c3eae37dfb 297 SUPERFAMILY SSF46894 230 293 1.84E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_15970 3f135f7f57f558a3d888db6aba01352f 348 Pfam PF03193 RsgA GTPase 101 275 7.2E-56 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 ambt_15970 3f135f7f57f558a3d888db6aba01352f 348 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 332 1.5E-83 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 ambt_15970 3f135f7f57f558a3d888db6aba01352f 348 Gene3D G3DSA:1.10.40.50 275 344 7.4E-23 T 13-10-2018 ambt_15970 3f135f7f57f558a3d888db6aba01352f 348 Gene3D G3DSA:2.40.50.140 39 102 2.7E-18 T 13-10-2018 ambt_15970 3f135f7f57f558a3d888db6aba01352f 348 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 41 339 36.076 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 ambt_15970 3f135f7f57f558a3d888db6aba01352f 348 Gene3D G3DSA:3.40.50.300 103 274 3.1E-49 T 13-10-2018 ambt_15970 3f135f7f57f558a3d888db6aba01352f 348 SUPERFAMILY SSF52540 114 338 1.95E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_07720 3258531702b3f9ab16939134d109d15f 253 SUPERFAMILY SSF102705 5 252 2.22E-82 T 13-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily ambt_07720 3258531702b3f9ab16939134d109d15f 253 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 241 1.2E-63 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ambt_07720 3258531702b3f9ab16939134d109d15f 253 Gene3D G3DSA:3.40.1390.30 16 237 1.5E-84 T 13-10-2018 ambt_07720 3258531702b3f9ab16939134d109d15f 253 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 252 7.3E-71 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ambt_07720 3258531702b3f9ab16939134d109d15f 253 Gene3D G3DSA:3.40.1390.30 99 224 1.5E-84 T 13-10-2018 ambt_06225 3c728d15cc9907ff75746e300e070522 72 Pfam PF09720 Putative addiction module component 14 67 1.5E-12 T 13-10-2018 IPR013406 Conserved hypothetical protein CHP02574, addiction module ambt_16145 1fd1064143df2cee6429a029301fa4ee 892 Pfam PF00905 Penicillin binding protein transpeptidase domain 451 634 5.4E-24 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ambt_16145 1fd1064143df2cee6429a029301fa4ee 892 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 776 1.8E-158 T 13-10-2018 ambt_16145 1fd1064143df2cee6429a029301fa4ee 892 Pfam PF00912 Transglycosylase 55 229 4.4E-60 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_16145 1fd1064143df2cee6429a029301fa4ee 892 Gene3D G3DSA:3.40.710.10 243 333 3.6E-6 T 13-10-2018 ambt_16145 1fd1064143df2cee6429a029301fa4ee 892 Pfam PF17092 Penicillin-binding protein OB-like domain 317 449 2.0E-25 T 13-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_16145 1fd1064143df2cee6429a029301fa4ee 892 SUPERFAMILY SSF53955 43 254 1.69E-72 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily ambt_16145 1fd1064143df2cee6429a029301fa4ee 892 Gene3D G3DSA:1.10.3810.10 48 242 4.5E-73 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_16145 1fd1064143df2cee6429a029301fa4ee 892 SUPERFAMILY SSF56601 211 869 6.24E-108 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ambt_00040 d0d4522ad4896d5b4d1026b35cd8b86c 195 Pfam PF03352 Methyladenine glycosylase 11 185 5.9E-75 T 13-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 ambt_00040 d0d4522ad4896d5b4d1026b35cd8b86c 195 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 8 186 2.7E-71 T 13-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 ambt_00040 d0d4522ad4896d5b4d1026b35cd8b86c 195 SUPERFAMILY SSF48150 7 189 2.2E-74 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ambt_00040 d0d4522ad4896d5b4d1026b35cd8b86c 195 Gene3D G3DSA:1.10.340.30 6 191 1.7E-77 T 13-10-2018 ambt_11645 41099fca7e0d85f270918f4b639251ca 545 Pfam PF00425 chorismate binding enzyme 265 525 1.8E-84 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ambt_11645 41099fca7e0d85f270918f4b639251ca 545 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 535 9.6E-216 T 13-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_11645 41099fca7e0d85f270918f4b639251ca 545 PRINTS PR00095 Anthranilate synthase component I signature 387 400 1.1E-21 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_11645 41099fca7e0d85f270918f4b639251ca 545 PRINTS PR00095 Anthranilate synthase component I signature 482 496 1.1E-21 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_11645 41099fca7e0d85f270918f4b639251ca 545 PRINTS PR00095 Anthranilate synthase component I signature 467 481 1.1E-21 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_11645 41099fca7e0d85f270918f4b639251ca 545 PRINTS PR00095 Anthranilate synthase component I signature 373 386 1.1E-21 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_11645 41099fca7e0d85f270918f4b639251ca 545 Gene3D G3DSA:3.60.120.10 8 542 5.2E-176 T 13-10-2018 IPR005801 ADC synthase GO:0009058 ambt_11645 41099fca7e0d85f270918f4b639251ca 545 PIRSF PIRSF001373 4 544 3.3E-245 T 13-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_11645 41099fca7e0d85f270918f4b639251ca 545 SUPERFAMILY SSF56322 15 533 1.83E-147 T 13-10-2018 IPR005801 ADC synthase GO:0009058 ambt_11645 41099fca7e0d85f270918f4b639251ca 545 Pfam PF04715 Anthranilate synthase component I, N terminal region 23 200 1.2E-16 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ambt_18370 2710ee95c416bc1007eecece7614c982 499 Pfam PF00171 Aldehyde dehydrogenase family 16 479 3.5E-138 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_18370 2710ee95c416bc1007eecece7614c982 499 SUPERFAMILY SSF53720 3 485 1.26E-146 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_18370 2710ee95c416bc1007eecece7614c982 499 Gene3D G3DSA:3.40.605.10 25 460 6.7E-155 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_18370 2710ee95c416bc1007eecece7614c982 499 Gene3D G3DSA:3.40.309.10 250 452 6.7E-155 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ambt_18370 2710ee95c416bc1007eecece7614c982 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ambt_18370 2710ee95c416bc1007eecece7614c982 499 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 483 1.6E-195 T 13-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 ambt_05955 248e850c50baff0cf23caf78406da519 150 SUPERFAMILY SSF52172 6 145 1.57E-33 T 13-10-2018 IPR011006 CheY-like superfamily ambt_05955 248e850c50baff0cf23caf78406da519 150 Pfam PF00072 Response regulator receiver domain 11 133 1.9E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05955 248e850c50baff0cf23caf78406da519 150 Gene3D G3DSA:3.40.50.2300 1 150 1.5E-36 T 13-10-2018 ambt_05955 248e850c50baff0cf23caf78406da519 150 SMART SM00448 9 134 2.3E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_06550 64ee96254a0ceb0d03d6513f9c051d9e 324 Gene3D G3DSA:3.40.50.720 123 267 1.7E-101 T 13-10-2018 ambt_06550 64ee96254a0ceb0d03d6513f9c051d9e 324 SUPERFAMILY SSF51735 116 288 1.68E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_06550 64ee96254a0ceb0d03d6513f9c051d9e 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 7.2E-11 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ambt_06550 64ee96254a0ceb0d03d6513f9c051d9e 324 SMART SM00829 10 322 1.5E-38 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ambt_06550 64ee96254a0ceb0d03d6513f9c051d9e 324 Gene3D G3DSA:3.90.180.10 13 318 1.7E-101 T 13-10-2018 ambt_06550 64ee96254a0ceb0d03d6513f9c051d9e 324 SUPERFAMILY SSF50129 1 140 4.72E-41 T 13-10-2018 IPR011032 GroES-like superfamily ambt_06550 64ee96254a0ceb0d03d6513f9c051d9e 324 Pfam PF00107 Zinc-binding dehydrogenase 151 282 8.9E-33 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ambt_01460 737768dab53b579ed66538ff17c20252 241 SUPERFAMILY SSF69593 9 238 2.22E-42 T 13-10-2018 ambt_01460 737768dab53b579ed66538ff17c20252 241 Pfam PF01553 Acyltransferase 56 179 1.3E-26 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_01460 737768dab53b579ed66538ff17c20252 241 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 179 4.0E-40 T 13-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 ambt_01460 737768dab53b579ed66538ff17c20252 241 SMART SM00563 67 182 1.5E-33 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_01545 97717cb2624ea63b7e08982539f9b474 463 Gene3D G3DSA:1.10.275.10 5 137 3.4E-53 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal ambt_01545 97717cb2624ea63b7e08982539f9b474 463 Gene3D G3DSA:1.20.200.10 138 404 7.5E-94 T 13-10-2018 ambt_01545 97717cb2624ea63b7e08982539f9b474 463 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ambt_01545 97717cb2624ea63b7e08982539f9b474 463 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 5.0E-28 T 13-10-2018 IPR000362 Fumarate lyase family ambt_01545 97717cb2624ea63b7e08982539f9b474 463 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 5.0E-28 T 13-10-2018 IPR000362 Fumarate lyase family ambt_01545 97717cb2624ea63b7e08982539f9b474 463 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 5.0E-28 T 13-10-2018 IPR000362 Fumarate lyase family ambt_01545 97717cb2624ea63b7e08982539f9b474 463 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 5.0E-28 T 13-10-2018 IPR000362 Fumarate lyase family ambt_01545 97717cb2624ea63b7e08982539f9b474 463 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 2.0E-6 T 13-10-2018 ambt_01545 97717cb2624ea63b7e08982539f9b474 463 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 2.0E-6 T 13-10-2018 ambt_01545 97717cb2624ea63b7e08982539f9b474 463 PRINTS PR00145 Argininosuccinate lyase family signature 132 154 2.0E-6 T 13-10-2018 ambt_01545 97717cb2624ea63b7e08982539f9b474 463 Pfam PF00206 Lyase 12 341 1.6E-93 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal ambt_01545 97717cb2624ea63b7e08982539f9b474 463 Gene3D G3DSA:1.10.40.30 407 463 5.3E-17 T 13-10-2018 ambt_01545 97717cb2624ea63b7e08982539f9b474 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 461 72.281 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ambt_01545 97717cb2624ea63b7e08982539f9b474 463 Pfam PF10415 Fumarase C C-terminus 407 459 1.3E-17 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ambt_01545 97717cb2624ea63b7e08982539f9b474 463 SUPERFAMILY SSF48557 1 455 2.65E-133 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 ambt_12250 db826784e1dc64fd03f2087159f93a4b 436 Pfam PF07687 Peptidase dimerisation domain 213 330 3.8E-12 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain ambt_12250 db826784e1dc64fd03f2087159f93a4b 436 SUPERFAMILY SSF53187 29 430 1.51E-38 T 13-10-2018 ambt_12250 db826784e1dc64fd03f2087159f93a4b 436 Gene3D G3DSA:3.40.630.10 46 418 4.2E-95 T 13-10-2018 ambt_12250 db826784e1dc64fd03f2087159f93a4b 436 Gene3D G3DSA:3.30.70.360 216 341 4.2E-95 T 13-10-2018 ambt_12250 db826784e1dc64fd03f2087159f93a4b 436 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 106 115 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ambt_12250 db826784e1dc64fd03f2087159f93a4b 436 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ambt_12250 db826784e1dc64fd03f2087159f93a4b 436 Pfam PF01546 Peptidase family M20/M25/M40 108 418 9.9E-18 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 ambt_12250 db826784e1dc64fd03f2087159f93a4b 436 SUPERFAMILY SSF55031 216 339 3.49E-7 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ambt_13385 33f12dc18ce0be63b1bf1f340a5f136d 221 Gene3D G3DSA:3.40.50.20 1 94 3.0E-9 T 13-10-2018 ambt_13385 33f12dc18ce0be63b1bf1f340a5f136d 221 Gene3D G3DSA:2.160.10.10 95 210 1.1E-21 T 13-10-2018 ambt_13385 33f12dc18ce0be63b1bf1f340a5f136d 221 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 127 159 8.5E-6 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_13385 33f12dc18ce0be63b1bf1f340a5f136d 221 SUPERFAMILY SSF51161 3 209 6.93E-29 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_12415 e3cd566c275e9ff82352b292c6e8ad6a 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 5 497 1.2E-208 T 13-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 ambt_12415 e3cd566c275e9ff82352b292c6e8ad6a 502 Pfam PF00474 Sodium:solute symporter family 34 437 4.5E-101 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_12415 e3cd566c275e9ff82352b292c6e8ad6a 502 Gene3D G3DSA:1.20.1730.10 20 499 3.6E-94 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily ambt_12415 e3cd566c275e9ff82352b292c6e8ad6a 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 156 181 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site ambt_12415 e3cd566c275e9ff82352b292c6e8ad6a 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 34 437 1.1E-90 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_17510 94b3ade2dc07fcdcfd4ba6141d49b498 418 SMART SM00448 126 240 5.7E-7 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_17510 94b3ade2dc07fcdcfd4ba6141d49b498 418 Gene3D G3DSA:3.40.50.2300 127 256 5.7E-14 T 13-10-2018 ambt_17510 94b3ade2dc07fcdcfd4ba6141d49b498 418 Gene3D G3DSA:3.40.50.2300 2 124 2.0E-5 T 13-10-2018 ambt_17510 94b3ade2dc07fcdcfd4ba6141d49b498 418 Gene3D G3DSA:3.30.70.270 257 418 6.1E-52 T 13-10-2018 ambt_17510 94b3ade2dc07fcdcfd4ba6141d49b498 418 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 255 412 1.5E-42 T 13-10-2018 IPR000160 GGDEF domain ambt_17510 94b3ade2dc07fcdcfd4ba6141d49b498 418 SUPERFAMILY SSF52172 3 117 3.84E-7 T 13-10-2018 IPR011006 CheY-like superfamily ambt_17510 94b3ade2dc07fcdcfd4ba6141d49b498 418 Pfam PF00990 Diguanylate cyclase, GGDEF domain 257 408 2.7E-41 T 13-10-2018 IPR000160 GGDEF domain ambt_17510 94b3ade2dc07fcdcfd4ba6141d49b498 418 SMART SM00267 246 412 7.2E-50 T 13-10-2018 IPR000160 GGDEF domain ambt_17510 94b3ade2dc07fcdcfd4ba6141d49b498 418 SUPERFAMILY SSF55073 262 413 5.26E-44 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_17510 94b3ade2dc07fcdcfd4ba6141d49b498 418 SUPERFAMILY SSF52172 125 256 2.42E-14 T 13-10-2018 IPR011006 CheY-like superfamily ambt_17510 94b3ade2dc07fcdcfd4ba6141d49b498 418 Pfam PF00072 Response regulator receiver domain 128 228 3.9E-10 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_20390 ff4c628fe0d3cc4ee0185065238b35c3 192 SMART SM00867 25 190 1.7E-69 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ambt_20390 ff4c628fe0d3cc4ee0185065238b35c3 192 SUPERFAMILY SSF101874 23 192 1.57E-55 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ambt_20390 ff4c628fe0d3cc4ee0185065238b35c3 192 Gene3D G3DSA:2.40.128.110 24 192 1.0E-53 T 13-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ambt_20390 ff4c628fe0d3cc4ee0185065238b35c3 192 Pfam PF04264 YceI-like domain 33 188 1.4E-40 T 13-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ambt_02805 8dbdfd49304d6b14b98c4a07f7a4c88b 182 Pfam PF07152 YaeQ protein 1 167 1.2E-71 T 13-10-2018 IPR009822 YaeQ ambt_02805 8dbdfd49304d6b14b98c4a07f7a4c88b 182 SUPERFAMILY SSF52980 2 167 8.31E-67 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ambt_02805 8dbdfd49304d6b14b98c4a07f7a4c88b 182 PIRSF PIRSF011484 1 181 1.0E-69 T 13-10-2018 IPR009822 YaeQ ambt_02805 8dbdfd49304d6b14b98c4a07f7a4c88b 182 SMART SM01322 1 178 1.9E-101 T 13-10-2018 IPR009822 YaeQ ambt_02805 8dbdfd49304d6b14b98c4a07f7a4c88b 182 Gene3D G3DSA:3.10.640.10 1 180 7.2E-73 T 13-10-2018 IPR038590 YaeQ superfamily ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 Gene3D G3DSA:3.30.70.270 228 404 3.2E-58 T 13-10-2018 ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 Pfam PF00990 Diguanylate cyclase, GGDEF domain 233 387 1.3E-43 T 13-10-2018 IPR000160 GGDEF domain ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 SMART SM00267 222 392 5.9E-59 T 13-10-2018 IPR000160 GGDEF domain ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 SUPERFAMILY SSF158472 158 204 7.85E-5 T 13-10-2018 ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 SUPERFAMILY SSF55073 238 393 6.51E-47 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 Gene3D G3DSA:3.20.20.450 405 658 3.5E-91 T 13-10-2018 IPR035919 EAL domain superfamily ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 SUPERFAMILY SSF141868 408 658 4.18E-83 T 13-10-2018 IPR035919 EAL domain superfamily ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 230 390 1.2E-40 T 13-10-2018 IPR000160 GGDEF domain ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 Pfam PF00563 EAL domain 408 644 2.1E-72 T 13-10-2018 IPR001633 EAL domain ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 SMART SM00304 156 209 2.6E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 Pfam PF17152 Periplasmic sensor domain 31 90 7.6E-9 T 13-10-2018 IPR033417 Periplasmic sensor domain CHASE8 ambt_03830 b1a2ecb91b2358a4bc52f99e3febdb68 674 SMART SM00052 403 649 3.5E-92 T 13-10-2018 IPR001633 EAL domain ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 Gene3D G3DSA:1.10.10.10 165 240 1.3E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 Gene3D G3DSA:1.10.10.10 243 316 8.2E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 SUPERFAMILY SSF88659 165 239 4.8E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 Pfam PF00140 Sigma-70 factor, region 1.2 54 84 1.4E-9 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 Gene3D G3DSA:1.10.601.10 78 164 8.9E-46 T 13-10-2018 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 SUPERFAMILY SSF88659 222 320 5.42E-25 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 Pfam PF04539 Sigma-70 region 3 172 247 1.5E-22 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 5 326 39.355 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 Pfam PF04542 Sigma-70 region 2 93 161 2.0E-20 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 PRINTS PR00046 Major sigma-70 factor signature 264 276 9.6E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 PRINTS PR00046 Major sigma-70 factor signature 285 300 9.6E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 PRINTS PR00046 Major sigma-70 factor signature 300 311 9.6E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 PRINTS PR00046 Major sigma-70 factor signature 116 129 9.6E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 PRINTS PR00046 Major sigma-70 factor signature 140 148 9.6E-28 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 Pfam PF04545 Sigma-70, region 4 260 313 5.4E-18 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 285 311 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 89 314 2.7E-36 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 SUPERFAMILY SSF88946 54 162 7.38E-44 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 46 326 5.0E-138 T 13-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_15515 25cdb1f9b69a303457a927542ab59cf5 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 116 129 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ambt_13235 45ed9b08f59e384cd82a9570392487d9 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.2E-27 T 13-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 ambt_13235 45ed9b08f59e384cd82a9570392487d9 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.0E-24 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ambt_13235 45ed9b08f59e384cd82a9570392487d9 89 PIRSF PIRSF004669 1 89 3.4E-26 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ambt_13235 45ed9b08f59e384cd82a9570392487d9 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 5.5E-15 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ambt_13235 45ed9b08f59e384cd82a9570392487d9 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 5.5E-15 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ambt_13235 45ed9b08f59e384cd82a9570392487d9 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 5.5E-15 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ambt_00415 0d1d171f373462a21a35276a55e715d9 312 PIRSF PIRSF000102 1 301 8.2E-62 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ambt_00415 0d1d171f373462a21a35276a55e715d9 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 13-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 ambt_00415 0d1d171f373462a21a35276a55e715d9 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 6.5E-131 T 13-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 ambt_00415 0d1d171f373462a21a35276a55e715d9 312 SUPERFAMILY SSF56327 146 310 2.83E-41 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ambt_00415 0d1d171f373462a21a35276a55e715d9 312 Gene3D G3DSA:3.90.110.10 147 311 6.3E-52 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ambt_00415 0d1d171f373462a21a35276a55e715d9 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 5.8E-47 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 ambt_00415 0d1d171f373462a21a35276a55e715d9 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.2E-44 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_00415 0d1d171f373462a21a35276a55e715d9 312 SUPERFAMILY SSF51735 1 145 2.72E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_00415 0d1d171f373462a21a35276a55e715d9 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 53.64 T 13-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 ambt_00415 0d1d171f373462a21a35276a55e715d9 312 Gene3D G3DSA:3.40.50.720 1 146 5.7E-63 T 13-10-2018 ambt_06000 bcda524a934488631e5f7d294e3cecb1 247 Gene3D G3DSA:2.30.30.240 133 224 6.2E-12 T 13-10-2018 ambt_06000 bcda524a934488631e5f7d294e3cecb1 247 SUPERFAMILY SSF50346 124 234 2.75E-17 T 13-10-2018 IPR011033 PRC-barrel-like superfamily ambt_06000 bcda524a934488631e5f7d294e3cecb1 247 Gene3D G3DSA:3.90.50.10 5 113 5.0E-15 T 13-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 ambt_06000 bcda524a934488631e5f7d294e3cecb1 247 Pfam PF05239 PRC-barrel domain 149 206 3.9E-6 T 13-10-2018 IPR027275 PRC-barrel domain ambt_06000 bcda524a934488631e5f7d294e3cecb1 247 Pfam PF05239 PRC-barrel domain 7 71 2.0E-5 T 13-10-2018 IPR027275 PRC-barrel domain ambt_06000 bcda524a934488631e5f7d294e3cecb1 247 SUPERFAMILY SSF50346 3 114 1.04E-24 T 13-10-2018 IPR011033 PRC-barrel-like superfamily ambt_05705 5f10ae9ca4f449886f6c60f7722f998c 1340 SUPERFAMILY SSF56219 970 1274 3.93E-32 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_05705 5f10ae9ca4f449886f6c60f7722f998c 1340 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 973 1266 1.7E-9 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ambt_05705 5f10ae9ca4f449886f6c60f7722f998c 1340 Pfam PF00932 Lamin Tail Domain 524 630 3.7E-12 T 13-10-2018 IPR001322 Lamin tail domain ambt_05705 5f10ae9ca4f449886f6c60f7722f998c 1340 Pfam PF04231 Endonuclease I 267 482 3.5E-42 T 13-10-2018 IPR007346 Endonuclease I GO:0004518 ambt_05705 5f10ae9ca4f449886f6c60f7722f998c 1340 Gene3D G3DSA:3.60.10.10 969 1273 1.1E-36 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_05705 5f10ae9ca4f449886f6c60f7722f998c 1340 SUPERFAMILY SSF54060 263 482 5.77E-51 T 13-10-2018 ambt_05705 5f10ae9ca4f449886f6c60f7722f998c 1340 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1283 1295 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_05705 5f10ae9ca4f449886f6c60f7722f998c 1340 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1313 1325 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_05705 5f10ae9ca4f449886f6c60f7722f998c 1340 SUPERFAMILY SSF63446 1279 1332 8.24E-6 T 13-10-2018 IPR036439 Dockerin domain superfamily GO:0000272 ambt_10605 2fc5098854b499f1d9f2825a4ffd7594 368 Gene3D G3DSA:3.40.50.2000 1 185 9.7E-27 T 13-10-2018 ambt_10605 2fc5098854b499f1d9f2825a4ffd7594 368 SUPERFAMILY SSF53756 1 364 7.18E-61 T 13-10-2018 ambt_10605 2fc5098854b499f1d9f2825a4ffd7594 368 Pfam PF00534 Glycosyl transferases group 1 198 333 6.0E-23 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_10605 2fc5098854b499f1d9f2825a4ffd7594 368 Gene3D G3DSA:3.40.50.2000 191 342 1.2E-27 T 13-10-2018 ambt_10605 2fc5098854b499f1d9f2825a4ffd7594 368 Pfam PF13439 Glycosyltransferase Family 4 15 175 3.2E-18 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ambt_22070 826e68d7a823a4f94f7c44480aa0dbd8 504 SUPERFAMILY SSF51905 19 433 3.02E-29 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_22070 826e68d7a823a4f94f7c44480aa0dbd8 504 Pfam PF04820 Tryptophan halogenase 21 471 9.2E-186 T 13-10-2018 IPR006905 Flavin-dependent halogenase ambt_22070 826e68d7a823a4f94f7c44480aa0dbd8 504 Gene3D G3DSA:3.50.50.60 19 503 4.2E-183 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_22070 826e68d7a823a4f94f7c44480aa0dbd8 504 PIRSF PIRSF011396 14 504 1.7E-192 T 13-10-2018 IPR033856 Flavin-dependent tryptophan halogenase ambt_07075 08ee57a51659106fa506ebd328be7fab 92 PRINTS PR00124 ATP synthase C subunit signature 52 77 4.1E-11 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07075 08ee57a51659106fa506ebd328be7fab 92 PRINTS PR00124 ATP synthase C subunit signature 35 50 4.1E-11 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07075 08ee57a51659106fa506ebd328be7fab 92 PRINTS PR00124 ATP synthase C subunit signature 14 33 4.1E-11 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07075 08ee57a51659106fa506ebd328be7fab 92 Gene3D G3DSA:1.20.20.10 5 83 2.1E-24 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07075 08ee57a51659106fa506ebd328be7fab 92 Pfam PF00137 ATP synthase subunit C 13 75 2.5E-14 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 ambt_07075 08ee57a51659106fa506ebd328be7fab 92 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 77 13.894 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07075 08ee57a51659106fa506ebd328be7fab 92 TIGRFAM TIGR03322 alt_F1F0_F0_C: alternate F1F0 ATPase, F0 subunit C 2 87 3.5E-47 T 13-10-2018 IPR017708 Alternate ATP synthase, F0 complex, subunit C, bacterial/archaeal ambt_07075 08ee57a51659106fa506ebd328be7fab 92 SUPERFAMILY SSF81333 6 80 4.97E-18 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily ambt_19760 27fb35c23b200d903e33fb13f91eadba 365 Gene3D G3DSA:3.40.50.10890 178 308 1.0E-23 T 13-10-2018 ambt_19760 27fb35c23b200d903e33fb13f91eadba 365 Gene3D G3DSA:3.60.15.10 38 336 1.0E-23 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_19760 27fb35c23b200d903e33fb13f91eadba 365 SMART SM00849 20 196 0.008 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_19760 27fb35c23b200d903e33fb13f91eadba 365 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 17 360 1.0E-132 T 13-10-2018 IPR026360 Putative exonuclease, DNA ligase-associated ambt_19760 27fb35c23b200d903e33fb13f91eadba 365 SUPERFAMILY SSF56281 21 352 6.83E-59 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_07295 e86b26f8f63605e9a0201c6b965d4130 445 PIRSF PIRSF006060 1 444 6.9E-68 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ambt_07295 e86b26f8f63605e9a0201c6b965d4130 445 Pfam PF13520 Amino acid permease 13 402 1.7E-29 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ambt_07295 e86b26f8f63605e9a0201c6b965d4130 445 Gene3D G3DSA:1.20.1740.10 7 438 1.3E-81 T 13-10-2018 ambt_16640 19a9ae34cd4da58490d0ac9a04fa30ea 291 Gene3D G3DSA:3.20.20.150 22 287 2.8E-68 T 13-10-2018 ambt_16640 19a9ae34cd4da58490d0ac9a04fa30ea 291 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 8 25 2.9E-4 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ambt_16640 19a9ae34cd4da58490d0ac9a04fa30ea 291 SUPERFAMILY SSF51658 43 262 4.54E-39 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily ambt_16640 19a9ae34cd4da58490d0ac9a04fa30ea 291 Pfam PF01261 Xylose isomerase-like TIM barrel 67 246 6.5E-16 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 Gene3D G3DSA:1.10.1140.10 354 474 1.1E-44 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 Hamap MF_01347 ATP synthase subunit beta [atpB]. 12 469 48.638 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 17 79 1.3E-11 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 SUPERFAMILY SSF50615 11 83 1.6E-16 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 SMART SM00382 150 335 1.2E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 TIGRFAM TIGR03305 alt_F1F0_F1_bet: alternate F1F0 ATPase, F1 subunit beta 15 462 3.4E-260 T 13-10-2018 IPR017691 ATP synthase subunit beta, bacterial and archaeal GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 Gene3D G3DSA:2.40.10.170 2 83 3.0E-18 T 13-10-2018 ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 SUPERFAMILY SSF47917 355 466 1.15E-42 T 13-10-2018 ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 138 351 1.9E-64 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 SUPERFAMILY SSF52540 85 355 1.4E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 14 464 1.0E-191 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ambt_07100 7d53a9ddb7a598c29c7237410c660036 480 Gene3D G3DSA:3.40.50.300 84 353 1.3E-102 T 13-10-2018 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 SUPERFAMILY SSF53850 7 221 3.44E-85 T 13-10-2018 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 9 300 8.4E-113 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 PRINTS PR00151 Porphobilinogen deaminase signature 48 68 1.0E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 PRINTS PR00151 Porphobilinogen deaminase signature 79 98 1.0E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 PRINTS PR00151 Porphobilinogen deaminase signature 233 250 1.0E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 PRINTS PR00151 Porphobilinogen deaminase signature 146 163 1.0E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 PRINTS PR00151 Porphobilinogen deaminase signature 127 144 1.0E-50 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 8 300 39.559 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 Gene3D G3DSA:3.40.190.10 9 213 2.3E-84 T 13-10-2018 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 9 215 3.4E-80 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 234 250 - T 13-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 230 298 1.4E-19 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 PIRSF PIRSF001438 1 311 2.8E-123 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 Gene3D G3DSA:3.30.160.40 224 309 2.4E-28 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 Gene3D G3DSA:3.40.190.10 106 205 2.3E-84 T 13-10-2018 ambt_18335 6f0f19f13c46cd4e2f0117fe80af1d9c 311 SUPERFAMILY SSF54782 223 310 1.44E-26 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_06505 37cf7a0b37207fd35c58992071ca78f1 365 Gene3D G3DSA:3.80.30.20 1 271 9.6E-80 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ambt_06505 37cf7a0b37207fd35c58992071ca78f1 365 Gene3D G3DSA:1.10.10.920 272 365 1.8E-28 T 13-10-2018 ambt_06505 37cf7a0b37207fd35c58992071ca78f1 365 SMART SM00729 4 180 6.6E-13 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ambt_06505 37cf7a0b37207fd35c58992071ca78f1 365 Pfam PF04055 Radical SAM superfamily 9 133 2.7E-10 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_06505 37cf7a0b37207fd35c58992071ca78f1 365 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 4 362 1.8E-125 T 13-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 ambt_06505 37cf7a0b37207fd35c58992071ca78f1 365 SUPERFAMILY SSF102114 7 352 5.3E-93 T 13-10-2018 ambt_06505 37cf7a0b37207fd35c58992071ca78f1 365 Pfam PF06969 HemN C-terminal domain 271 338 1.5E-8 T 13-10-2018 IPR010723 HemN, C-terminal ambt_22225 228685550d61111bd9544b8bef609207 462 Gene3D G3DSA:3.40.50.300 221 390 1.1E-104 T 13-10-2018 ambt_22225 228685550d61111bd9544b8bef609207 462 Gene3D G3DSA:1.20.120.430 126 462 1.1E-104 T 13-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 ambt_22225 228685550d61111bd9544b8bef609207 462 PRINTS PR00449 Transforming protein P21 ras signature 330 343 4.7E-5 T 13-10-2018 ambt_22225 228685550d61111bd9544b8bef609207 462 PRINTS PR00449 Transforming protein P21 ras signature 362 384 4.7E-5 T 13-10-2018 ambt_22225 228685550d61111bd9544b8bef609207 462 PRINTS PR00449 Transforming protein P21 ras signature 221 242 4.7E-5 T 13-10-2018 ambt_22225 228685550d61111bd9544b8bef609207 462 SUPERFAMILY SSF52540 76 381 3.29E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_22225 228685550d61111bd9544b8bef609207 462 Pfam PF10396 GTP-binding protein TrmE N-terminus 10 124 1.1E-34 T 13-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 ambt_22225 228685550d61111bd9544b8bef609207 462 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 15 462 6.6E-105 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 ambt_22225 228685550d61111bd9544b8bef609207 462 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 379 1.2E-24 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_22225 228685550d61111bd9544b8bef609207 462 Pfam PF01926 50S ribosome-binding GTPase 222 315 4.4E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_22225 228685550d61111bd9544b8bef609207 462 Gene3D G3DSA:3.30.1360.120 2 125 9.8E-38 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ambt_22225 228685550d61111bd9544b8bef609207 462 SUPERFAMILY SSF116878 125 462 6.02E-50 T 13-10-2018 ambt_22225 228685550d61111bd9544b8bef609207 462 Pfam PF12631 MnmE helical domain 127 459 4.5E-61 T 13-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 ambt_22225 228685550d61111bd9544b8bef609207 462 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 9 462 32.517 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 ambt_18655 ae2fe5fdf2bba6286bbfad59579bac9e 292 SUPERFAMILY SSF144091 100 288 7.46E-36 T 13-10-2018 ambt_18655 ae2fe5fdf2bba6286bbfad59579bac9e 292 Pfam PF01694 Rhomboid family 138 282 4.1E-25 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ambt_18655 ae2fe5fdf2bba6286bbfad59579bac9e 292 Gene3D G3DSA:1.20.1540.10 97 283 1.9E-46 T 13-10-2018 IPR035952 Rhomboid-like superfamily ambt_18655 ae2fe5fdf2bba6286bbfad59579bac9e 292 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 5 79 1.1E-16 T 13-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 ambt_18655 ae2fe5fdf2bba6286bbfad59579bac9e 292 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 5 279 2.4E-82 T 13-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 ambt_21985 a382239470e7bcf0798ccc4a6a83d393 1080 Pfam PF00270 DEAD/DEAH box helicase 328 470 1.3E-18 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_21985 a382239470e7bcf0798ccc4a6a83d393 1080 SMART SM00490 628 711 5.5E-7 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_21985 a382239470e7bcf0798ccc4a6a83d393 1080 Gene3D G3DSA:3.40.50.300 563 740 1.0E-24 T 13-10-2018 ambt_21985 a382239470e7bcf0798ccc4a6a83d393 1080 Gene3D G3DSA:3.40.50.300 295 497 8.4E-41 T 13-10-2018 ambt_21985 a382239470e7bcf0798ccc4a6a83d393 1080 SUPERFAMILY SSF52540 330 717 4.34E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_21985 a382239470e7bcf0798ccc4a6a83d393 1080 SMART SM00487 306 489 3.6E-15 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_16365 e7c6153f378a2abd83e7484ea2c8cabb 806 Gene3D G3DSA:3.40.710.10 88 744 6.7E-246 T 13-10-2018 ambt_16365 e7c6153f378a2abd83e7484ea2c8cabb 806 SUPERFAMILY SSF53955 194 386 2.08E-65 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily ambt_16365 e7c6153f378a2abd83e7484ea2c8cabb 806 Gene3D G3DSA:3.30.2060.10 96 185 6.7E-246 T 13-10-2018 ambt_16365 e7c6153f378a2abd83e7484ea2c8cabb 806 Pfam PF14814 Bifunctional transglycosylase second domain 98 182 3.8E-21 T 13-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_16365 e7c6153f378a2abd83e7484ea2c8cabb 806 PIRSF PIRSF002799 27 806 0.0 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_16365 e7c6153f378a2abd83e7484ea2c8cabb 806 Pfam PF00912 Transglycosylase 194 364 3.8E-56 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_16365 e7c6153f378a2abd83e7484ea2c8cabb 806 Pfam PF00905 Penicillin binding protein transpeptidase domain 457 717 7.3E-20 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ambt_16365 e7c6153f378a2abd83e7484ea2c8cabb 806 Gene3D G3DSA:1.10.3810.10 186 389 6.7E-246 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_16365 e7c6153f378a2abd83e7484ea2c8cabb 806 SUPERFAMILY SSF56601 347 785 5.01E-109 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ambt_16365 e7c6153f378a2abd83e7484ea2c8cabb 806 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 54 771 1.4E-265 T 13-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_11400 1b2a666204ebe81b4dd6d2aab8f33576 477 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.1E-199 T 13-10-2018 ambt_11400 1b2a666204ebe81b4dd6d2aab8f33576 477 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.9E-150 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 ambt_11400 1b2a666204ebe81b4dd6d2aab8f33576 477 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 3.9E-30 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 ambt_11400 1b2a666204ebe81b4dd6d2aab8f33576 477 Pfam PF04055 Radical SAM superfamily 151 325 4.2E-27 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_11400 1b2a666204ebe81b4dd6d2aab8f33576 477 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ambt_11400 1b2a666204ebe81b4dd6d2aab8f33576 477 SUPERFAMILY SSF102114 129 372 3.79E-60 T 13-10-2018 ambt_11400 1b2a666204ebe81b4dd6d2aab8f33576 477 Gene3D G3DSA:3.80.30.20 145 377 2.8E-78 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ambt_11400 1b2a666204ebe81b4dd6d2aab8f33576 477 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 441 74.027 T 13-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 ambt_11400 1b2a666204ebe81b4dd6d2aab8f33576 477 Gene3D G3DSA:3.40.50.12160 3 135 5.6E-34 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily ambt_11400 1b2a666204ebe81b4dd6d2aab8f33576 477 Pfam PF01938 TRAM domain 379 440 2.4E-20 T 13-10-2018 IPR002792 TRAM domain ambt_11400 1b2a666204ebe81b4dd6d2aab8f33576 477 SMART SM00729 147 367 9.8E-56 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ambt_15040 8acabe881637ddfac3f87fc7edb82221 353 Gene3D G3DSA:2.40.50.100 66 194 7.6E-69 T 13-10-2018 ambt_15040 8acabe881637ddfac3f87fc7edb82221 353 Gene3D G3DSA:2.40.30.170 54 276 7.6E-69 T 13-10-2018 ambt_15040 8acabe881637ddfac3f87fc7edb82221 353 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 266 4.2E-33 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_15040 8acabe881637ddfac3f87fc7edb82221 353 Gene3D G3DSA:2.40.420.20 277 343 7.6E-69 T 13-10-2018 ambt_15040 8acabe881637ddfac3f87fc7edb82221 353 SUPERFAMILY SSF111369 54 272 6.67E-41 T 13-10-2018 ambt_15040 8acabe881637ddfac3f87fc7edb82221 353 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 346 3.6E-74 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_15040 8acabe881637ddfac3f87fc7edb82221 353 Gene3D G3DSA:1.10.287.470 101 160 7.6E-69 T 13-10-2018 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.8E-40 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 SUPERFAMILY SSF52490 14 205 3.92E-69 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 Pfam PF12327 FtsZ family, C-terminal domain 222 316 1.8E-35 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.7E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.7E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.7E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 PRINTS PR00423 Cell division protein FtsZ signature 212 233 2.7E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 Gene3D G3DSA:3.40.50.1440 10 317 2.5E-114 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 SMART SM00864 13 205 1.2E-111 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 370 37.615 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 SUPERFAMILY SSF55307 204 320 2.75E-40 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 327 5.1E-134 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 ambt_02230 051cf76173d31b7a732cf51a2e3f69ab 389 SMART SM00865 207 325 1.8E-53 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 ambt_20090 29b6ff2bffa6f1eb7bcd83631e2072f1 330 Gene3D G3DSA:3.60.130.10 2 326 2.7E-93 T 13-10-2018 ambt_20090 29b6ff2bffa6f1eb7bcd83631e2072f1 330 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 40 323 2.0E-33 T 13-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 ambt_20090 29b6ff2bffa6f1eb7bcd83631e2072f1 330 SUPERFAMILY SSF51197 12 326 6.41E-73 T 13-10-2018 ambt_21205 aefdb02ee3b14446dd01035f8a35ad7f 318 Gene3D G3DSA:1.10.287.70 24 256 1.4E-61 T 13-10-2018 ambt_21205 aefdb02ee3b14446dd01035f8a35ad7f 318 SUPERFAMILY SSF81324 23 253 1.57E-54 T 13-10-2018 ambt_21205 aefdb02ee3b14446dd01035f8a35ad7f 318 Pfam PF00520 Ion transport protein 25 257 5.2E-38 T 13-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 ambt_21205 aefdb02ee3b14446dd01035f8a35ad7f 318 PRINTS PR00169 Potassium channel signature 226 252 4.0E-36 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ambt_21205 aefdb02ee3b14446dd01035f8a35ad7f 318 PRINTS PR00169 Potassium channel signature 166 189 4.0E-36 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ambt_21205 aefdb02ee3b14446dd01035f8a35ad7f 318 PRINTS PR00169 Potassium channel signature 197 219 4.0E-36 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ambt_21205 aefdb02ee3b14446dd01035f8a35ad7f 318 PRINTS PR00169 Potassium channel signature 18 46 4.0E-36 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ambt_21205 aefdb02ee3b14446dd01035f8a35ad7f 318 PRINTS PR00169 Potassium channel signature 137 163 4.0E-36 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ambt_21205 aefdb02ee3b14446dd01035f8a35ad7f 318 PRINTS PR00169 Potassium channel signature 60 83 4.0E-36 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ambt_12265 0cf221cd393dcab5468a6575301946de 586 Gene3D G3DSA:1.20.1560.10 4 330 7.1E-80 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_12265 0cf221cd393dcab5468a6575301946de 586 Pfam PF00005 ABC transporter 365 513 2.7E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_12265 0cf221cd393dcab5468a6575301946de 586 SUPERFAMILY SSF52540 342 584 4.11E-89 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12265 0cf221cd393dcab5468a6575301946de 586 SUPERFAMILY SSF90123 16 324 1.57E-72 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_12265 0cf221cd393dcab5468a6575301946de 586 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_12265 0cf221cd393dcab5468a6575301946de 586 Pfam PF00664 ABC transporter transmembrane region 32 292 3.1E-54 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ambt_12265 0cf221cd393dcab5468a6575301946de 586 Gene3D G3DSA:3.40.50.300 340 585 1.8E-89 T 13-10-2018 ambt_12265 0cf221cd393dcab5468a6575301946de 586 SMART SM00382 373 559 1.7E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 871 989 1.3E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 PRINTS PR00344 Bacterial sensor protein C-terminal signature 976 989 2.4E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 970 2.4E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 PRINTS PR00344 Bacterial sensor protein C-terminal signature 919 933 2.4E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 PRINTS PR00344 Bacterial sensor protein C-terminal signature 937 947 2.4E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 Gene3D G3DSA:1.20.1730.10 43 525 6.2E-12 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 SUPERFAMILY SSF55874 817 990 1.83E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 Gene3D G3DSA:3.40.50.2300 1045 1161 1.2E-14 T 13-10-2018 ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 SMART SM00448 1043 1154 1.7E-9 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 SMART SM00387 870 992 4.5E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 Gene3D G3DSA:3.30.450.20 594 726 3.1E-10 T 13-10-2018 ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 Pfam PF12860 PAS fold 613 727 2.8E-38 T 13-10-2018 ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 SUPERFAMILY SSF47384 746 827 2.94E-9 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 SUPERFAMILY SSF55785 619 732 6.98E-6 T 13-10-2018 IPR035965 PAS domain superfamily ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 Gene3D G3DSA:3.30.565.10 825 992 3.1E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 Pfam PF00474 Sodium:solute symporter family 47 442 2.2E-7 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 SUPERFAMILY SSF52172 1042 1159 1.99E-16 T 13-10-2018 IPR011006 CheY-like superfamily ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 SMART SM00388 761 826 2.2E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_11525 1a4a94a08ea16c9a497aa7adf1357d85 1162 Gene3D G3DSA:1.10.287.130 727 824 1.5E-11 T 13-10-2018 ambt_18690 864282391806dc158a54da15244a6718 365 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 94 330 2.9E-47 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 ambt_18690 864282391806dc158a54da15244a6718 365 SUPERFAMILY SSF53756 28 365 1.33E-79 T 13-10-2018 ambt_18690 864282391806dc158a54da15244a6718 365 Gene3D G3DSA:3.40.50.2000 29 176 3.5E-22 T 13-10-2018 ambt_18690 864282391806dc158a54da15244a6718 365 Gene3D G3DSA:3.40.50.2000 184 365 9.3E-37 T 13-10-2018 ambt_08730 01c8194137792dc3550b2bb704edc201 514 Pfam PF00665 Integrase core domain 138 268 3.1E-17 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_08730 01c8194137792dc3550b2bb704edc201 514 SUPERFAMILY SSF53098 163 301 1.59E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_00235 01c8194137792dc3550b2bb704edc201 514 Pfam PF00665 Integrase core domain 138 268 3.1E-17 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_00235 01c8194137792dc3550b2bb704edc201 514 SUPERFAMILY SSF53098 163 301 1.59E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_21410 ff124a4b02f2a8135ba0ddfa576c374b 206 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_21410 ff124a4b02f2a8135ba0ddfa576c374b 206 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 1.4E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_21410 ff124a4b02f2a8135ba0ddfa576c374b 206 Pfam PF11612 Type II secretion system (T2SS), protein J 56 199 5.0E-38 T 13-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 ambt_21410 ff124a4b02f2a8135ba0ddfa576c374b 206 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 24 1.0E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_21410 ff124a4b02f2a8135ba0ddfa576c374b 206 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 4 201 3.5E-53 T 13-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 ambt_21410 ff124a4b02f2a8135ba0ddfa576c374b 206 SUPERFAMILY SSF54523 37 203 5.89E-44 T 13-10-2018 ambt_21410 ff124a4b02f2a8135ba0ddfa576c374b 206 Gene3D G3DSA:3.10.610.10 36 146 6.9E-38 T 13-10-2018 ambt_17395 7c8d5a2ba74660ce585c904294a81a8a 197 SUPERFAMILY SSF56784 7 193 2.67E-47 T 13-10-2018 IPR036412 HAD-like superfamily ambt_17395 7c8d5a2ba74660ce585c904294a81a8a 197 Gene3D G3DSA:1.10.150.240 20 90 3.2E-45 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ambt_17395 7c8d5a2ba74660ce585c904294a81a8a 197 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 135 187 3.5E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_17395 7c8d5a2ba74660ce585c904294a81a8a 197 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 187 1.1E-25 T 13-10-2018 ambt_17395 7c8d5a2ba74660ce585c904294a81a8a 197 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 7 187 2.8E-50 T 13-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase ambt_17395 7c8d5a2ba74660ce585c904294a81a8a 197 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 176 189 2.1E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_17395 7c8d5a2ba74660ce585c904294a81a8a 197 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 2.1E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_17395 7c8d5a2ba74660ce585c904294a81a8a 197 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 2.1E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_17395 7c8d5a2ba74660ce585c904294a81a8a 197 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 2.1E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_17395 7c8d5a2ba74660ce585c904294a81a8a 197 Gene3D G3DSA:3.40.50.1000 8 190 3.2E-45 T 13-10-2018 IPR023214 HAD superfamily ambt_01930 cb0747796f5792ab001fa4ee85d00b9e 379 Pfam PF07730 Histidine kinase 188 254 3.1E-14 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ambt_01930 cb0747796f5792ab001fa4ee85d00b9e 379 SUPERFAMILY SSF55874 261 376 7.39E-6 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01930 cb0747796f5792ab001fa4ee85d00b9e 379 Gene3D G3DSA:3.30.565.10 262 377 4.1E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_13765 f3e86268ff7d598b7c464f7d05c44e75 418 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 351 6.4E-11 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ambt_13765 f3e86268ff7d598b7c464f7d05c44e75 418 Gene3D G3DSA:1.10.150.20 169 227 4.1E-5 T 13-10-2018 ambt_13765 f3e86268ff7d598b7c464f7d05c44e75 418 Pfam PF13438 Domain of unknown function (DUF4113) 367 416 3.9E-19 T 13-10-2018 IPR025188 Domain of unknown function DUF4113 ambt_13765 f3e86268ff7d598b7c464f7d05c44e75 418 Gene3D G3DSA:2.30.40.20 10 73 1.2E-33 T 13-10-2018 ambt_13765 f3e86268ff7d598b7c464f7d05c44e75 418 SUPERFAMILY SSF56672 2 234 9.78E-57 T 13-10-2018 ambt_13765 f3e86268ff7d598b7c464f7d05c44e75 418 Pfam PF00817 impB/mucB/samB family 5 150 1.6E-30 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ambt_13765 f3e86268ff7d598b7c464f7d05c44e75 418 Gene3D G3DSA:3.30.70.270 4 155 1.2E-33 T 13-10-2018 ambt_17115 28c4203aa117a6a7f3b232299135b167 807 SUPERFAMILY SSF49373 400 477 8.83E-10 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ambt_17115 28c4203aa117a6a7f3b232299135b167 807 SMART SM00634 382 481 0.042 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ambt_17115 28c4203aa117a6a7f3b232299135b167 807 SMART SM00634 52 137 0.062 T 13-10-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain ambt_17115 28c4203aa117a6a7f3b232299135b167 807 SUPERFAMILY SSF49373 499 564 4.51E-5 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ambt_17115 28c4203aa117a6a7f3b232299135b167 807 SUPERFAMILY SSF49373 57 139 4.51E-13 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ambt_17115 28c4203aa117a6a7f3b232299135b167 807 Gene3D G3DSA:2.60.40.10 54 140 2.5E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_17115 28c4203aa117a6a7f3b232299135b167 807 Gene3D G3DSA:2.60.40.10 382 482 9.8E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_17115 28c4203aa117a6a7f3b232299135b167 807 Gene3D G3DSA:2.60.40.10 493 583 5.3E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_17115 28c4203aa117a6a7f3b232299135b167 807 SUPERFAMILY SSF49373 168 245 4.71E-6 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ambt_15230 33cb048899b93582363fdd08493012a0 172 SUPERFAMILY SSF55729 2 149 3.24E-31 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_15230 33cb048899b93582363fdd08493012a0 172 Gene3D G3DSA:3.40.630.30 2 154 7.9E-33 T 13-10-2018 ambt_15230 33cb048899b93582363fdd08493012a0 172 Pfam PF13302 Acetyltransferase (GNAT) domain 7 146 1.0E-20 T 13-10-2018 IPR000182 GNAT domain ambt_13230 5b4bc2d7a254037bb635082ae649ceb9 259 Pfam PF01311 Bacterial export proteins, family 1 14 244 4.8E-63 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ambt_13230 5b4bc2d7a254037bb635082ae649ceb9 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 3.5E-17 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ambt_13230 5b4bc2d7a254037bb635082ae649ceb9 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 3.5E-17 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ambt_13230 5b4bc2d7a254037bb635082ae649ceb9 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 3.5E-17 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ambt_13230 5b4bc2d7a254037bb635082ae649ceb9 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 3.5E-17 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ambt_13230 5b4bc2d7a254037bb635082ae649ceb9 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 13 255 6.8E-67 T 13-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 ambt_06835 e1f03a9128f51057dc9c8daabe73356c 598 Gene3D G3DSA:1.10.3720.10 313 575 2.0E-17 T 13-10-2018 IPR035906 MetI-like superfamily ambt_06835 e1f03a9128f51057dc9c8daabe73356c 598 SUPERFAMILY SSF161098 332 577 2.83E-20 T 13-10-2018 IPR035906 MetI-like superfamily ambt_06835 e1f03a9128f51057dc9c8daabe73356c 598 Gene3D G3DSA:1.10.3720.10 10 301 2.4E-15 T 13-10-2018 IPR035906 MetI-like superfamily ambt_06835 e1f03a9128f51057dc9c8daabe73356c 598 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 413 574 9.7E-8 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ambt_06835 e1f03a9128f51057dc9c8daabe73356c 598 SUPERFAMILY SSF161098 16 291 3.46E-16 T 13-10-2018 IPR035906 MetI-like superfamily ambt_01350 9f74d45ea58196ad3a4f3a7354795f31 75 SUPERFAMILY SSF143120 1 70 8.11E-13 T 13-10-2018 IPR036165 YefM-like superfamily ambt_01350 9f74d45ea58196ad3a4f3a7354795f31 75 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 20 51 5.6E-8 T 13-10-2018 ambt_01350 9f74d45ea58196ad3a4f3a7354795f31 75 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 20 61 4.6E-9 T 13-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ambt_12245 2de2e82f09790cc530f2b6ab133e6442 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.7E-28 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12245 2de2e82f09790cc530f2b6ab133e6442 83 SUPERFAMILY SSF54565 1 76 6.02E-28 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12245 2de2e82f09790cc530f2b6ab133e6442 83 Pfam PF00886 Ribosomal protein S16 8 68 1.1E-23 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12245 2de2e82f09790cc530f2b6ab133e6442 83 Gene3D G3DSA:3.30.1320.10 1 82 2.9E-30 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_12245 2de2e82f09790cc530f2b6ab133e6442 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.407 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_06750 1ba0b74f810948d6a94f1db675a35ab0 855 Gene3D G3DSA:3.60.10.10 459 813 7.8E-25 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_06750 1ba0b74f810948d6a94f1db675a35ab0 855 SUPERFAMILY SSF56219 444 819 7.63E-27 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_06750 1ba0b74f810948d6a94f1db675a35ab0 855 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 832 852 0.0041 T 13-10-2018 IPR020008 GlyGly-CTERM domain ambt_07600 93ee49bd9d9885cab9a1750594334105 836 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 41 835 8.0E-139 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor ambt_07600 93ee49bd9d9885cab9a1750594334105 836 SUPERFAMILY SSF56935 34 834 6.59E-58 T 13-10-2018 ambt_07600 93ee49bd9d9885cab9a1750594334105 836 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 162 2.0E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_13245 62f257a4a8d8d2fc8e6c4765723622bc 139 Pfam PF04347 Flagellar biosynthesis protein, FliO 43 124 1.7E-18 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 ambt_13245 62f257a4a8d8d2fc8e6c4765723622bc 139 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 97 1.9E-21 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 ambt_09765 b98efee739770914a9bc0834ba934618 134 SUPERFAMILY SSF46785 10 102 5.13E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_09765 b98efee739770914a9bc0834ba934618 134 Gene3D G3DSA:1.10.10.10 10 120 4.8E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_09765 b98efee739770914a9bc0834ba934618 134 Pfam PF03551 Transcriptional regulator PadR-like family 24 95 7.6E-18 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal ambt_00840 1206f4974a2302a6cd793620efe42de0 427 SUPERFAMILY SSF47384 164 204 4.32E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_00840 1206f4974a2302a6cd793620efe42de0 427 Gene3D G3DSA:3.30.450.20 1 128 7.7E-24 T 13-10-2018 ambt_00840 1206f4974a2302a6cd793620efe42de0 427 SMART SM00387 310 418 4.4E-26 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_00840 1206f4974a2302a6cd793620efe42de0 427 Gene3D G3DSA:3.30.565.10 265 417 1.6E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_00840 1206f4974a2302a6cd793620efe42de0 427 SUPERFAMILY SSF55874 259 418 3.14E-38 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_00840 1206f4974a2302a6cd793620efe42de0 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 6.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_00840 1206f4974a2302a6cd793620efe42de0 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 375 6.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_00840 1206f4974a2302a6cd793620efe42de0 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 6.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_00840 1206f4974a2302a6cd793620efe42de0 427 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 415 6.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_00840 1206f4974a2302a6cd793620efe42de0 427 Pfam PF00512 His Kinase A (phospho-acceptor) domain 170 266 4.7E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_00840 1206f4974a2302a6cd793620efe42de0 427 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 415 2.1E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 Gene3D G3DSA:1.10.760.10 273 391 1.7E-29 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 SUPERFAMILY SSF81464 38 127 2.29E-25 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 201 249 - T 13-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 47 266 1.2E-56 T 13-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 292 366 1.6E-12 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 39 118 4.6E-12 T 13-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 Gene3D G3DSA:1.10.287.90 57 128 1.8E-78 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 SUPERFAMILY SSF46626 288 381 9.31E-23 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 Gene3D G3DSA:2.60.40.420 129 265 1.8E-78 T 13-10-2018 IPR008972 Cupredoxin ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 133 253 1.7E-36 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 SUPERFAMILY SSF49503 125 324 8.82E-52 T 13-10-2018 IPR008972 Cupredoxin ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 PRINTS PR01166 Cytochrome c oxidase subunit II signature 95 107 1.7E-38 T 13-10-2018 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 PRINTS PR01166 Cytochrome c oxidase subunit II signature 200 220 1.7E-38 T 13-10-2018 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 PRINTS PR01166 Cytochrome c oxidase subunit II signature 238 255 1.7E-38 T 13-10-2018 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 PRINTS PR01166 Cytochrome c oxidase subunit II signature 107 127 1.7E-38 T 13-10-2018 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 PRINTS PR01166 Cytochrome c oxidase subunit II signature 176 197 1.7E-38 T 13-10-2018 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 PRINTS PR01166 Cytochrome c oxidase subunit II signature 220 237 1.7E-38 T 13-10-2018 ambt_21745 0366706f5b2bd1ba9ec6c6ae410e79cc 391 PRINTS PR01166 Cytochrome c oxidase subunit II signature 129 148 1.7E-38 T 13-10-2018 ambt_03155 3361d03352f570dde18f03be4d6f4c40 303 SUPERFAMILY SSF53474 73 300 1.95E-41 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_03155 3361d03352f570dde18f03be4d6f4c40 303 Gene3D G3DSA:3.40.50.1820 59 302 5.6E-59 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_03155 3361d03352f570dde18f03be4d6f4c40 303 Pfam PF01738 Dienelactone hydrolase family 100 300 2.3E-45 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 ambt_14680 0f316396f2b694725bbfd41275eb7034 210 Gene3D G3DSA:2.102.10.10 56 204 9.0E-47 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_14680 0f316396f2b694725bbfd41275eb7034 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 132 143 2.6E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ambt_14680 0f316396f2b694725bbfd41275eb7034 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 163 175 2.6E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ambt_14680 0f316396f2b694725bbfd41275eb7034 210 PRINTS PR00162 Rieske 2Fe-2S subunit signature 176 188 2.6E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ambt_14680 0f316396f2b694725bbfd41275eb7034 210 Pfam PF00355 Rieske [2Fe-2S] domain 124 189 5.0E-10 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ambt_14680 0f316396f2b694725bbfd41275eb7034 210 Gene3D G3DSA:1.20.5.510 13 53 1.7E-6 T 13-10-2018 ambt_14680 0f316396f2b694725bbfd41275eb7034 210 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 22 204 9.5E-72 T 13-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 ambt_14680 0f316396f2b694725bbfd41275eb7034 210 SUPERFAMILY SSF50022 43 202 2.46E-40 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_14680 0f316396f2b694725bbfd41275eb7034 210 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 15 53 4.1E-17 T 13-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 ambt_02815 da2ffe41ec87675bc6161ca444d059c4 318 PIRSF PIRSF035875 6 306 8.9E-67 T 13-10-2018 IPR017039 Virulence factor BrkB ambt_02815 da2ffe41ec87675bc6161ca444d059c4 318 Pfam PF03631 Virulence factor BrkB 33 285 3.8E-58 T 13-10-2018 IPR017039 Virulence factor BrkB ambt_02815 da2ffe41ec87675bc6161ca444d059c4 318 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 25 284 4.4E-30 T 13-10-2018 IPR017039 Virulence factor BrkB ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 Gene3D G3DSA:2.60.260.20 211 288 5.0E-27 T 13-10-2018 ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 PRINTS PR00625 DnaJ domain signature 61 80 1.2E-20 T 13-10-2018 IPR001623 DnaJ domain ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 PRINTS PR00625 DnaJ domain signature 41 61 1.2E-20 T 13-10-2018 IPR001623 DnaJ domain ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 PRINTS PR00625 DnaJ domain signature 25 40 1.2E-20 T 13-10-2018 IPR001623 DnaJ domain ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 PRINTS PR00625 DnaJ domain signature 7 25 1.2E-20 T 13-10-2018 IPR001623 DnaJ domain ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 Pfam PF01556 DnaJ C terminal domain 135 288 2.0E-33 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 SUPERFAMILY SSF49493 129 224 8.89E-13 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 Gene3D G3DSA:1.10.287.110 2 121 1.2E-33 T 13-10-2018 IPR036869 Chaperone J-domain superfamily ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 13-10-2018 IPR018253 DnaJ domain, conserved site ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 Pfam PF00226 DnaJ domain 5 66 2.2E-24 T 13-10-2018 IPR001623 DnaJ domain ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 SMART SM00271 4 61 3.2E-26 T 13-10-2018 IPR001623 DnaJ domain ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 SUPERFAMILY SSF49493 216 296 5.76E-17 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 Gene3D G3DSA:2.60.260.20 128 210 3.1E-15 T 13-10-2018 ambt_02780 168340f6cf82d0d355d6d52acd8da3b3 319 SUPERFAMILY SSF46565 1 112 8.5E-31 T 13-10-2018 IPR036869 Chaperone J-domain superfamily ambt_18385 a0f682290ebd5d8d1f2c4c364f5c85c7 209 Gene3D G3DSA:1.10.10.60 1 64 4.9E-21 T 13-10-2018 ambt_18385 a0f682290ebd5d8d1f2c4c364f5c85c7 209 Gene3D G3DSA:1.10.357.10 65 206 3.6E-50 T 13-10-2018 ambt_18385 a0f682290ebd5d8d1f2c4c364f5c85c7 209 SUPERFAMILY SSF46689 5 82 9.23E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_18385 a0f682290ebd5d8d1f2c4c364f5c85c7 209 SUPERFAMILY SSF48498 84 205 3.15E-39 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ambt_18385 a0f682290ebd5d8d1f2c4c364f5c85c7 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 8.2E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_18385 a0f682290ebd5d8d1f2c4c364f5c85c7 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.4E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_18385 a0f682290ebd5d8d1f2c4c364f5c85c7 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 5.4E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_18385 a0f682290ebd5d8d1f2c4c364f5c85c7 209 Pfam PF08362 YcdC-like protein, C-terminal region 65 206 1.4E-47 T 13-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 ambt_05750 6a3f0c040fefe3c46c2726353abf560b 229 SUPERFAMILY SSF52172 3 136 7.54E-36 T 13-10-2018 IPR011006 CheY-like superfamily ambt_05750 6a3f0c040fefe3c46c2726353abf560b 229 Pfam PF00072 Response regulator receiver domain 7 116 2.9E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_05750 6a3f0c040fefe3c46c2726353abf560b 229 SUPERFAMILY SSF46894 129 227 2.8E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_05750 6a3f0c040fefe3c46c2726353abf560b 229 Gene3D G3DSA:3.40.50.2300 1 131 2.1E-32 T 13-10-2018 ambt_05750 6a3f0c040fefe3c46c2726353abf560b 229 Gene3D G3DSA:1.10.10.10 132 229 8.9E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_05750 6a3f0c040fefe3c46c2726353abf560b 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 227 3.8E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_05750 6a3f0c040fefe3c46c2726353abf560b 229 SMART SM00862 153 228 4.7E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_05750 6a3f0c040fefe3c46c2726353abf560b 229 SMART SM00448 5 115 1.1E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_11050 c71878291ef827750446dae1c35b30da 133 PIRSF PIRSF000714 1 133 4.9E-49 T 13-10-2018 IPR026026 Histidine triad hydrolase, Hint-type ambt_11050 c71878291ef827750446dae1c35b30da 133 Gene3D G3DSA:3.30.428.10 1 133 4.8E-41 T 13-10-2018 IPR036265 HIT-like superfamily ambt_11050 c71878291ef827750446dae1c35b30da 133 SUPERFAMILY SSF54197 6 132 3.61E-33 T 13-10-2018 IPR036265 HIT-like superfamily ambt_11050 c71878291ef827750446dae1c35b30da 133 Pfam PF01230 HIT domain 8 98 1.7E-13 T 13-10-2018 IPR001310 Histidine triad (HIT) protein ambt_06530 0679f3bd4f50ffa0847df200b09f027d 849 SUPERFAMILY SSF56935 32 849 2.14E-95 T 13-10-2018 ambt_06530 0679f3bd4f50ffa0847df200b09f027d 849 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 157 4.6E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_06530 0679f3bd4f50ffa0847df200b09f027d 849 Pfam PF00593 TonB dependent receptor 280 846 2.4E-31 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_19480 7c348f5b97392b5c2e537c0a822efe26 233 Pfam PF03749 Sugar fermentation stimulation protein 13 224 2.7E-72 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein ambt_19480 7c348f5b97392b5c2e537c0a822efe26 233 Gene3D G3DSA:3.40.1350.60 81 233 6.2E-48 T 13-10-2018 ambt_19480 7c348f5b97392b5c2e537c0a822efe26 233 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 4 232 1.4E-64 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein ambt_19480 7c348f5b97392b5c2e537c0a822efe26 233 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 233 53.257 T 13-10-2018 IPR005224 Sugar fermentation stimulation protein ambt_19480 7c348f5b97392b5c2e537c0a822efe26 233 Gene3D G3DSA:2.40.50.580 1 80 8.2E-32 T 13-10-2018 ambt_14795 afe1a9b31b6a543b493eb9082dc2abd3 327 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 323 1.8E-124 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 ambt_14795 afe1a9b31b6a543b493eb9082dc2abd3 327 Gene3D G3DSA:3.40.718.10 2 327 2.1E-123 T 13-10-2018 ambt_14795 afe1a9b31b6a543b493eb9082dc2abd3 327 SUPERFAMILY SSF53659 4 325 1.52E-110 T 13-10-2018 ambt_14795 afe1a9b31b6a543b493eb9082dc2abd3 327 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 31 318 4.1E-105 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 ambt_14795 afe1a9b31b6a543b493eb9082dc2abd3 327 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 326 34.869 T 13-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 ambt_01940 338a845957313b326ed0c019aec3b624 382 SUPERFAMILY SSF50129 329 379 8.95E-11 T 13-10-2018 IPR011032 GroES-like superfamily ambt_01940 338a845957313b326ed0c019aec3b624 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 4.5E-227 T 13-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 ambt_01940 338a845957313b326ed0c019aec3b624 382 SUPERFAMILY SSF50129 10 196 1.25E-72 T 13-10-2018 IPR011032 GroES-like superfamily ambt_01940 338a845957313b326ed0c019aec3b624 382 Gene3D G3DSA:3.40.50.720 185 323 1.5E-151 T 13-10-2018 ambt_01940 338a845957313b326ed0c019aec3b624 382 SUPERFAMILY SSF51735 171 345 7.04E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_01940 338a845957313b326ed0c019aec3b624 382 Pfam PF00107 Zinc-binding dehydrogenase 208 328 1.2E-24 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ambt_01940 338a845957313b326ed0c019aec3b624 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ambt_01940 338a845957313b326ed0c019aec3b624 382 Gene3D G3DSA:3.90.180.10 17 375 1.5E-151 T 13-10-2018 ambt_01940 338a845957313b326ed0c019aec3b624 382 SMART SM00829 23 378 0.0038 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ambt_01940 338a845957313b326ed0c019aec3b624 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 2.8E-25 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ambt_08930 acc96cd1420fbae5884af3545e05b121 182 Gene3D G3DSA:3.40.33.10 10 152 2.2E-15 T 13-10-2018 IPR035940 CAP superfamily ambt_13255 fcbc5cad2c4be7c6d3b9c7f18c3c7d9d 352 Pfam PF02154 Flagellar motor switch protein FliM 37 229 1.4E-80 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ambt_13255 fcbc5cad2c4be7c6d3b9c7f18c3c7d9d 352 PIRSF PIRSF002888 1 328 1.5E-91 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ambt_13255 fcbc5cad2c4be7c6d3b9c7f18c3c7d9d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 8.4E-21 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ambt_13255 fcbc5cad2c4be7c6d3b9c7f18c3c7d9d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 8.4E-21 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ambt_13255 fcbc5cad2c4be7c6d3b9c7f18c3c7d9d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 8.4E-21 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ambt_13255 fcbc5cad2c4be7c6d3b9c7f18c3c7d9d 352 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 8.4E-21 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ambt_13255 fcbc5cad2c4be7c6d3b9c7f18c3c7d9d 352 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 4.2E-114 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ambt_13255 fcbc5cad2c4be7c6d3b9c7f18c3c7d9d 352 SUPERFAMILY SSF103039 4 230 5.75E-19 T 13-10-2018 IPR028976 CheC-like superfamily ambt_13255 fcbc5cad2c4be7c6d3b9c7f18c3c7d9d 352 Gene3D G3DSA:3.40.1550.10 43 230 1.1E-54 T 13-10-2018 IPR028976 CheC-like superfamily ambt_13255 fcbc5cad2c4be7c6d3b9c7f18c3c7d9d 352 SUPERFAMILY SSF101801 247 322 3.4E-13 T 13-10-2018 IPR036429 SpoA-like superfamily ambt_13255 fcbc5cad2c4be7c6d3b9c7f18c3c7d9d 352 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 1.1E-14 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) ambt_07965 fdbe65cb4ffac6f25fdf81122b46da82 395 SUPERFAMILY SSF52518 26 388 7.51E-106 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold ambt_07965 fdbe65cb4ffac6f25fdf81122b46da82 395 Pfam PF00676 Dehydrogenase E1 component 58 351 2.8E-93 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ambt_07965 fdbe65cb4ffac6f25fdf81122b46da82 395 Gene3D G3DSA:3.40.50.970 8 392 1.7E-133 T 13-10-2018 ambt_14220 aa80aabeacbef8d74aaea0fe5cd764a0 530 SMART SM00382 26 238 3.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_14220 aa80aabeacbef8d74aaea0fe5cd764a0 530 SMART SM00382 344 512 4.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_14220 aa80aabeacbef8d74aaea0fe5cd764a0 530 SUPERFAMILY SSF52540 297 522 4.52E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14220 aa80aabeacbef8d74aaea0fe5cd764a0 530 Pfam PF00005 ABC transporter 336 467 2.0E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_14220 aa80aabeacbef8d74aaea0fe5cd764a0 530 Pfam PF00005 ABC transporter 18 184 3.1E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_14220 aa80aabeacbef8d74aaea0fe5cd764a0 530 SUPERFAMILY SSF52540 4 238 3.61E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14220 aa80aabeacbef8d74aaea0fe5cd764a0 530 Gene3D G3DSA:3.40.50.300 282 530 3.6E-52 T 13-10-2018 ambt_14220 aa80aabeacbef8d74aaea0fe5cd764a0 530 Pfam PF12848 ABC transporter 224 306 5.5E-22 T 13-10-2018 IPR032781 ABC-transporter extension domain ambt_14220 aa80aabeacbef8d74aaea0fe5cd764a0 530 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_14220 aa80aabeacbef8d74aaea0fe5cd764a0 530 Gene3D G3DSA:3.40.50.300 3 281 1.2E-53 T 13-10-2018 ambt_15115 d590a73f9413973c93a46eea7f53b6e5 210 Gene3D G3DSA:3.40.30.10 23 209 7.3E-47 T 13-10-2018 ambt_15115 d590a73f9413973c93a46eea7f53b6e5 210 Pfam PF01323 DSBA-like thioredoxin domain 46 186 8.0E-18 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 ambt_15115 d590a73f9413973c93a46eea7f53b6e5 210 ProSitePatterns PS00194 Thioredoxin family active site. 46 64 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ambt_15115 d590a73f9413973c93a46eea7f53b6e5 210 PIRSF PIRSF001488 1 210 2.6E-49 T 13-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL ambt_15115 d590a73f9413973c93a46eea7f53b6e5 210 SUPERFAMILY SSF52833 27 203 8.54E-40 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_11865 2d7edc66fe0b6c327aa2c79b8925b155 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 312 6.9E-73 T 13-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 ambt_11865 2d7edc66fe0b6c327aa2c79b8925b155 322 Gene3D G3DSA:1.20.58.1130 9 205 2.6E-86 T 13-10-2018 ambt_11865 2d7edc66fe0b6c327aa2c79b8925b155 322 Gene3D G3DSA:1.20.1420.30 35 309 2.6E-86 T 13-10-2018 ambt_11865 2d7edc66fe0b6c327aa2c79b8925b155 322 Pfam PF01699 Sodium/calcium exchanger protein 174 317 1.0E-33 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 ambt_11865 2d7edc66fe0b6c327aa2c79b8925b155 322 Pfam PF01699 Sodium/calcium exchanger protein 6 144 3.0E-22 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 ambt_05105 0f00e294c95e1f2c394aa00a90fb15b7 630 Pfam PF00486 Transcriptional regulatory protein, C terminal 21 96 1.9E-18 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_05105 0f00e294c95e1f2c394aa00a90fb15b7 630 SUPERFAMILY SSF46894 3 96 1.81E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_05105 0f00e294c95e1f2c394aa00a90fb15b7 630 SMART SM00862 21 96 5.8E-17 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_05105 0f00e294c95e1f2c394aa00a90fb15b7 630 SUPERFAMILY SSF48452 328 534 7.17E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_05105 0f00e294c95e1f2c394aa00a90fb15b7 630 Gene3D G3DSA:1.25.40.10 303 421 2.8E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_05105 0f00e294c95e1f2c394aa00a90fb15b7 630 Gene3D G3DSA:1.10.10.10 1 98 9.7E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_05105 0f00e294c95e1f2c394aa00a90fb15b7 630 Gene3D G3DSA:1.25.40.10 422 619 6.7E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_10255 24cbc0bfbc9739c47384c01bbe9eade6 477 Gene3D G3DSA:3.30.420.10 1 196 2.8E-69 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_10255 24cbc0bfbc9739c47384c01bbe9eade6 477 Pfam PF08411 Exonuclease C-terminal 207 475 3.5E-86 T 13-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 ambt_10255 24cbc0bfbc9739c47384c01bbe9eade6 477 SMART SM00479 5 198 0.0062 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_10255 24cbc0bfbc9739c47384c01bbe9eade6 477 PIRSF PIRSF000977 1 477 2.5E-182 T 13-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 ambt_10255 24cbc0bfbc9739c47384c01bbe9eade6 477 SUPERFAMILY SSF53098 5 477 6.56E-116 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_10255 24cbc0bfbc9739c47384c01bbe9eade6 477 Gene3D G3DSA:1.20.1280.70 356 417 3.3E-15 T 13-10-2018 ambt_10255 24cbc0bfbc9739c47384c01bbe9eade6 477 Gene3D G3DSA:2.30.30.450 209 350 8.7E-41 T 13-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily ambt_10255 24cbc0bfbc9739c47384c01bbe9eade6 477 Pfam PF00929 Exonuclease 7 188 1.2E-21 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_07130 6569fcecd4020f8bfc68b5438e65187a 367 SUPERFAMILY SSF51395 2 351 3.42E-96 T 13-10-2018 ambt_07130 6569fcecd4020f8bfc68b5438e65187a 367 Gene3D G3DSA:3.20.20.70 5 361 1.3E-102 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_07130 6569fcecd4020f8bfc68b5438e65187a 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 352 2.3E-64 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ambt_01865 aeacf36ad3443e911019a34b17a84894 322 SUPERFAMILY SSF53686 2 316 9.65E-34 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ambt_01865 aeacf36ad3443e911019a34b17a84894 322 Gene3D G3DSA:3.40.50.1100 2 314 1.7E-44 T 13-10-2018 ambt_01865 aeacf36ad3443e911019a34b17a84894 322 Gene3D G3DSA:3.40.50.1100 16 136 1.7E-44 T 13-10-2018 ambt_01865 aeacf36ad3443e911019a34b17a84894 322 PIRSF PIRSF006278 1 321 3.0E-47 T 13-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase ambt_01865 aeacf36ad3443e911019a34b17a84894 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 2 236 6.1E-11 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 SMART SM00228 247 319 1.8E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 Gene3D G3DSA:2.30.42.10 249 334 3.4E-19 T 13-10-2018 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 Pfam PF13180 PDZ domain 259 325 1.0E-13 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 SUPERFAMILY SSF50156 230 325 3.29E-21 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 PRINTS PR00834 HtrA/DegQ protease family signature 100 120 2.3E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 PRINTS PR00834 HtrA/DegQ protease family signature 79 91 2.3E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 PRINTS PR00834 HtrA/DegQ protease family signature 140 164 2.3E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 PRINTS PR00834 HtrA/DegQ protease family signature 277 289 2.3E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 PRINTS PR00834 HtrA/DegQ protease family signature 173 190 2.3E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 PRINTS PR00834 HtrA/DegQ protease family signature 195 212 2.3E-44 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 Gene3D G3DSA:2.40.10.10 133 248 3.4E-31 T 13-10-2018 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 Pfam PF13365 Trypsin-like peptidase domain 70 202 5.0E-27 T 13-10-2018 ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 SUPERFAMILY SSF50494 35 244 4.98E-54 T 13-10-2018 IPR009003 Peptidase S1, PA clan ambt_14535 4a9544381f35fb71049d5217a0f4433b 335 Gene3D G3DSA:2.40.10.10 22 129 1.1E-27 T 13-10-2018 ambt_09180 b0223a793483626ef064e9b70d551926 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 254 271 4.6E-42 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_09180 b0223a793483626ef064e9b70d551926 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 320 337 4.6E-42 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_09180 b0223a793483626ef064e9b70d551926 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 288 305 4.6E-42 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_09180 b0223a793483626ef064e9b70d551926 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 504 517 4.6E-42 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_09180 b0223a793483626ef064e9b70d551926 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 363 379 4.6E-42 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_09180 b0223a793483626ef064e9b70d551926 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 178 196 4.6E-42 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_09180 b0223a793483626ef064e9b70d551926 524 PRINTS PR00744 Glycosyl hydrolase family 37 signature 427 443 4.6E-42 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_09180 b0223a793483626ef064e9b70d551926 524 SUPERFAMILY SSF48208 31 517 1.36E-146 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 ambt_09180 b0223a793483626ef064e9b70d551926 524 ProSitePatterns PS00928 Trehalase signature 2. 434 443 - T 13-10-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_09180 b0223a793483626ef064e9b70d551926 524 Pfam PF01204 Trehalase 44 520 1.7E-136 T 13-10-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ambt_09180 b0223a793483626ef064e9b70d551926 524 Gene3D G3DSA:1.50.10.10 27 524 1.2E-172 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 ambt_18975 b6e0de69ee9bdf730d88b2c6ccf25b40 500 Pfam PF13007 Transposase C of IS166 homeodomain 29 93 2.4E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain ambt_18975 b6e0de69ee9bdf730d88b2c6ccf25b40 500 Pfam PF03050 Transposase IS66 family 165 452 3.2E-101 T 13-10-2018 IPR004291 Transposase, IS66 ambt_18975 b6e0de69ee9bdf730d88b2c6ccf25b40 500 Pfam PF13005 zinc-finger binding domain of transposase IS66 101 145 9.4E-18 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 ambt_18975 b6e0de69ee9bdf730d88b2c6ccf25b40 500 Pfam PF13817 IS66 C-terminal element 459 495 1.6E-9 T 13-10-2018 IPR039552 Transposase IS66, C-terminal ambt_11415 c35b48391c13f32d37c591b3cdda8bd4 285 SUPERFAMILY SSF56176 203 281 2.67E-19 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ambt_11415 c35b48391c13f32d37c591b3cdda8bd4 285 SUPERFAMILY SSF54631 63 200 8.21E-34 T 13-10-2018 ambt_11415 c35b48391c13f32d37c591b3cdda8bd4 285 SMART SM00116 76 125 27.0 T 13-10-2018 IPR000644 CBS domain ambt_11415 c35b48391c13f32d37c591b3cdda8bd4 285 SMART SM00116 139 187 0.037 T 13-10-2018 IPR000644 CBS domain ambt_11415 c35b48391c13f32d37c591b3cdda8bd4 285 Pfam PF00571 CBS domain 136 187 2.2E-6 T 13-10-2018 IPR000644 CBS domain ambt_11415 c35b48391c13f32d37c591b3cdda8bd4 285 Pfam PF00571 CBS domain 67 123 6.3E-5 T 13-10-2018 IPR000644 CBS domain ambt_11415 c35b48391c13f32d37c591b3cdda8bd4 285 Pfam PF03471 Transporter associated domain 208 281 9.2E-18 T 13-10-2018 IPR005170 Transporter-associated domain ambt_11415 c35b48391c13f32d37c591b3cdda8bd4 285 SMART SM01091 205 283 1.5E-21 T 13-10-2018 IPR005170 Transporter-associated domain ambt_11415 c35b48391c13f32d37c591b3cdda8bd4 285 Gene3D G3DSA:3.30.465.10 194 281 2.4E-24 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ambt_11415 c35b48391c13f32d37c591b3cdda8bd4 285 Gene3D G3DSA:3.10.580.10 49 193 9.0E-54 T 13-10-2018 ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 Gene3D G3DSA:3.40.50.1820 40 693 8.0E-242 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 627 649 2.1E-46 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 493 517 2.1E-46 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 609 624 2.1E-46 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 551 571 2.1E-46 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 521 540 2.1E-46 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 467 485 2.1E-46 T 13-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 Pfam PF00326 Prolyl oligopeptidase family 483 696 6.2E-65 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 SUPERFAMILY SSF50993 20 425 2.62E-84 T 13-10-2018 ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 SUPERFAMILY SSF53474 434 676 1.84E-39 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 Gene3D G3DSA:2.130.10.120 91 424 8.0E-242 T 13-10-2018 ambt_04815 85a8cc3817c3e212d0acec052899d0e9 701 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 22 422 1.3E-97 T 13-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 ambt_20045 bfc10c41b3344007889ee4340bc08ad9 399 Pfam PF01032 FecCD transport family 56 389 1.6E-87 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ambt_20045 bfc10c41b3344007889ee4340bc08ad9 399 SUPERFAMILY SSF81345 39 390 1.31E-79 T 13-10-2018 IPR037294 ABC transporter, BtuC-like ambt_20045 bfc10c41b3344007889ee4340bc08ad9 399 Gene3D G3DSA:1.10.3470.10 40 397 3.4E-95 T 13-10-2018 IPR037294 ABC transporter, BtuC-like ambt_05425 ce3dad24ab6df180c0dd226ee0da85fd 346 SUPERFAMILY SSF141571 81 322 5.62E-8 T 13-10-2018 ambt_05425 ce3dad24ab6df180c0dd226ee0da85fd 346 Pfam PF00805 Pentapeptide repeats (8 copies) 293 318 1.4E-4 T 13-10-2018 IPR001646 Pentapeptide repeat ambt_02620 a8657e0fb5ba6a8310b202eb1cc789d9 336 SUPERFAMILY SSF52317 28 216 9.51E-33 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_02620 a8657e0fb5ba6a8310b202eb1cc789d9 336 Gene3D G3DSA:1.10.10.60 285 336 1.5E-12 T 13-10-2018 ambt_02620 a8657e0fb5ba6a8310b202eb1cc789d9 336 Gene3D G3DSA:1.10.10.60 227 284 1.4E-10 T 13-10-2018 ambt_02620 a8657e0fb5ba6a8310b202eb1cc789d9 336 SUPERFAMILY SSF46689 287 335 4.35E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_02620 a8657e0fb5ba6a8310b202eb1cc789d9 336 Gene3D G3DSA:3.40.50.880 25 221 1.7E-44 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_02620 a8657e0fb5ba6a8310b202eb1cc789d9 336 Pfam PF01965 DJ-1/PfpI family 28 196 1.4E-15 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ambt_02620 a8657e0fb5ba6a8310b202eb1cc789d9 336 Pfam PF12833 Helix-turn-helix domain 257 335 4.4E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_02620 a8657e0fb5ba6a8310b202eb1cc789d9 336 SMART SM00342 251 334 2.6E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_02620 a8657e0fb5ba6a8310b202eb1cc789d9 336 SUPERFAMILY SSF46689 235 285 6.27E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_10755 445fc5e2d170e42cd5b18bc7466f677c 410 Pfam PF01546 Peptidase family M20/M25/M40 78 405 3.0E-27 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 ambt_10755 445fc5e2d170e42cd5b18bc7466f677c 410 Pfam PF07687 Peptidase dimerisation domain 213 311 2.3E-5 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain ambt_10755 445fc5e2d170e42cd5b18bc7466f677c 410 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 23 405 8.2E-116 T 13-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ambt_10755 445fc5e2d170e42cd5b18bc7466f677c 410 SUPERFAMILY SSF53187 21 408 1.03E-75 T 13-10-2018 ambt_10755 445fc5e2d170e42cd5b18bc7466f677c 410 SUPERFAMILY SSF55031 214 329 1.6E-28 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ambt_10755 445fc5e2d170e42cd5b18bc7466f677c 410 Gene3D G3DSA:3.30.70.360 214 327 1.1E-134 T 13-10-2018 ambt_10755 445fc5e2d170e42cd5b18bc7466f677c 410 PIRSF PIRSF001235 6 410 9.9E-129 T 13-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ambt_10755 445fc5e2d170e42cd5b18bc7466f677c 410 Gene3D G3DSA:3.40.630.10 27 402 1.1E-134 T 13-10-2018 ambt_04415 8f975a41ac20aa3d0bb73ef1ec9a3b6f 417 SUPERFAMILY SSF53335 21 361 9.49E-91 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_04415 8f975a41ac20aa3d0bb73ef1ec9a3b6f 417 Pfam PF02353 Mycolic acid cyclopropane synthetase 133 403 2.3E-81 T 13-10-2018 ambt_04415 8f975a41ac20aa3d0bb73ef1ec9a3b6f 417 Gene3D G3DSA:3.40.50.150 140 412 4.4E-97 T 13-10-2018 ambt_04415 8f975a41ac20aa3d0bb73ef1ec9a3b6f 417 PIRSF PIRSF003085 15 417 1.6E-119 T 13-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 ambt_04550 3a40c4fe4eb7a565a6d88bd28a7df7fa 977 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 852 974 3.4E-22 T 13-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_04550 3a40c4fe4eb7a565a6d88bd28a7df7fa 977 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 4.0E-137 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 ambt_04550 3a40c4fe4eb7a565a6d88bd28a7df7fa 977 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 360 5.7E-28 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 ambt_04550 3a40c4fe4eb7a565a6d88bd28a7df7fa 977 SUPERFAMILY SSF52540 34 222 3.16E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04550 3a40c4fe4eb7a565a6d88bd28a7df7fa 977 SMART SM00382 37 178 4.9E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_04550 3a40c4fe4eb7a565a6d88bd28a7df7fa 977 Gene3D G3DSA:3.30.300.150 847 959 1.0E-19 T 13-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_04550 3a40c4fe4eb7a565a6d88bd28a7df7fa 977 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.5E-46 T 13-10-2018 ambt_04550 3a40c4fe4eb7a565a6d88bd28a7df7fa 977 Gene3D G3DSA:3.40.50.300 13 177 1.3E-103 T 13-10-2018 ambt_04550 3a40c4fe4eb7a565a6d88bd28a7df7fa 977 Gene3D G3DSA:1.10.8.60 8 240 1.3E-103 T 13-10-2018 ambt_04550 3a40c4fe4eb7a565a6d88bd28a7df7fa 977 Gene3D G3DSA:1.20.272.10 242 361 3.4E-40 T 13-10-2018 ambt_04550 3a40c4fe4eb7a565a6d88bd28a7df7fa 977 SUPERFAMILY SSF48019 244 364 1.62E-27 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ambt_05635 8cfe1a06b6a324b32db079b41e6c2861 378 SUPERFAMILY SSF55347 129 315 2.83E-18 T 13-10-2018 ambt_05635 8cfe1a06b6a324b32db079b41e6c2861 378 Gene3D G3DSA:3.30.360.10 125 375 1.5E-23 T 13-10-2018 ambt_05635 8cfe1a06b6a324b32db079b41e6c2861 378 SUPERFAMILY SSF51735 2 152 4.39E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_05635 8cfe1a06b6a324b32db079b41e6c2861 378 Gene3D G3DSA:3.40.50.720 3 124 5.4E-28 T 13-10-2018 ambt_05635 8cfe1a06b6a324b32db079b41e6c2861 378 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 118 6.7E-24 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ambt_09880 b7bed822c5131917d9de139a2d2adfbc 280 TIGRFAM TIGR04179 rhombo_lipo: rhombotail lipoprotein 21 272 5.7E-106 T 13-10-2018 IPR026443 Rhombotail lipoprotein ambt_21280 da651e04bb959833eb5340fbd9f15289 82 Pfam PF00550 Phosphopantetheine attachment site 5 75 8.7E-7 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain ambt_21280 da651e04bb959833eb5340fbd9f15289 82 SUPERFAMILY SSF47336 3 79 1.04E-10 T 13-10-2018 IPR036736 ACP-like superfamily ambt_21280 da651e04bb959833eb5340fbd9f15289 82 Gene3D G3DSA:1.10.1200.10 1 78 1.5E-15 T 13-10-2018 IPR036736 ACP-like superfamily ambt_15540 ea62dd01bf2c0713495746acf186f938 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 2.2E-44 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15540 ea62dd01bf2c0713495746acf186f938 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.0E-39 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15540 ea62dd01bf2c0713495746acf186f938 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_15540 ea62dd01bf2c0713495746acf186f938 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.961 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15540 ea62dd01bf2c0713495746acf186f938 103 SUPERFAMILY SSF141091 1 102 5.62E-39 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_02850 521a10de8355695ed206b46ccacdf66b 887 SUPERFAMILY SSF56935 75 887 4.58E-97 T 13-10-2018 ambt_02850 521a10de8355695ed206b46ccacdf66b 887 Gene3D G3DSA:2.40.170.20 388 887 2.4E-55 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_02850 521a10de8355695ed206b46ccacdf66b 887 Pfam PF07715 TonB-dependent Receptor Plug Domain 91 212 5.5E-21 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_02850 521a10de8355695ed206b46ccacdf66b 887 Pfam PF00593 TonB dependent receptor 361 886 2.0E-38 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_02850 521a10de8355695ed206b46ccacdf66b 887 Gene3D G3DSA:2.170.130.10 71 216 4.9E-34 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_11520 2138a320cd64e2aaec595f443aa7bd18 206 Gene3D G3DSA:3.90.20.20 34 139 6.1E-33 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 ambt_11520 2138a320cd64e2aaec595f443aa7bd18 206 ProSitePatterns PS01071 grpE protein signature. 151 194 - T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ambt_11520 2138a320cd64e2aaec595f443aa7bd18 206 Pfam PF01025 GrpE 34 195 1.5E-55 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ambt_11520 2138a320cd64e2aaec595f443aa7bd18 206 Hamap MF_01151 Protein GrpE [grpE]. 9 196 21.953 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ambt_11520 2138a320cd64e2aaec595f443aa7bd18 206 PRINTS PR00773 GrpE protein signature 65 81 8.3E-28 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ambt_11520 2138a320cd64e2aaec595f443aa7bd18 206 PRINTS PR00773 GrpE protein signature 148 163 8.3E-28 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ambt_11520 2138a320cd64e2aaec595f443aa7bd18 206 PRINTS PR00773 GrpE protein signature 93 108 8.3E-28 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ambt_11520 2138a320cd64e2aaec595f443aa7bd18 206 PRINTS PR00773 GrpE protein signature 175 194 8.3E-28 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ambt_11520 2138a320cd64e2aaec595f443aa7bd18 206 SUPERFAMILY SSF58014 43 140 6.8E-30 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 ambt_11520 2138a320cd64e2aaec595f443aa7bd18 206 SUPERFAMILY SSF51064 142 197 2.88E-19 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ambt_11520 2138a320cd64e2aaec595f443aa7bd18 206 Gene3D G3DSA:2.30.22.10 140 196 2.8E-25 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ambt_06805 7254a36a6f4d6e6d2a08db98f3917c7a 155 Gene3D G3DSA:3.10.590.10 1 155 6.1E-62 T 13-10-2018 ambt_06805 7254a36a6f4d6e6d2a08db98f3917c7a 155 Pfam PF01878 EVE domain 2 148 2.1E-54 T 13-10-2018 IPR002740 EVE domain ambt_06805 7254a36a6f4d6e6d2a08db98f3917c7a 155 SUPERFAMILY SSF88697 1 153 2.27E-59 T 13-10-2018 IPR015947 PUA-like superfamily ambt_20015 2e362b3e5d44a70aadc8a4d9bd4a90f2 333 Gene3D G3DSA:3.40.50.2300 60 304 2.0E-71 T 13-10-2018 ambt_20015 2e362b3e5d44a70aadc8a4d9bd4a90f2 333 Pfam PF13377 Periplasmic binding protein-like domain 169 329 5.4E-33 T 13-10-2018 ambt_20015 2e362b3e5d44a70aadc8a4d9bd4a90f2 333 SMART SM00354 1 71 1.7E-26 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_20015 2e362b3e5d44a70aadc8a4d9bd4a90f2 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.4E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_20015 2e362b3e5d44a70aadc8a4d9bd4a90f2 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.4E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_20015 2e362b3e5d44a70aadc8a4d9bd4a90f2 333 Gene3D G3DSA:3.40.50.2300 160 289 2.0E-71 T 13-10-2018 ambt_20015 2e362b3e5d44a70aadc8a4d9bd4a90f2 333 SUPERFAMILY SSF53822 61 330 5.57E-79 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_20015 2e362b3e5d44a70aadc8a4d9bd4a90f2 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.1E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_20015 2e362b3e5d44a70aadc8a4d9bd4a90f2 333 Gene3D G3DSA:1.10.260.40 1 59 1.2E-21 T 13-10-2018 ambt_20015 2e362b3e5d44a70aadc8a4d9bd4a90f2 333 SUPERFAMILY SSF47413 1 59 5.63E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_19755 585b74d85363c88ae1ba4adba89d0fc9 837 Gene3D G3DSA:3.40.50.300 14 231 7.1E-40 T 13-10-2018 ambt_19755 585b74d85363c88ae1ba4adba89d0fc9 837 Gene3D G3DSA:3.40.50.300 256 399 1.2E-24 T 13-10-2018 ambt_19755 585b74d85363c88ae1ba4adba89d0fc9 837 SMART SM00487 30 246 3.6E-26 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_19755 585b74d85363c88ae1ba4adba89d0fc9 837 PIRSF PIRSF037307 6 829 1.8E-182 T 13-10-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 ambt_19755 585b74d85363c88ae1ba4adba89d0fc9 837 Pfam PF08494 DEAD/H associated 612 795 1.3E-38 T 13-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 ambt_19755 585b74d85363c88ae1ba4adba89d0fc9 837 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 23 819 0.0 T 13-10-2018 IPR026362 DEXH box helicase, DNA ligase-associated ambt_19755 585b74d85363c88ae1ba4adba89d0fc9 837 SMART SM00490 285 370 1.9E-14 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_19755 585b74d85363c88ae1ba4adba89d0fc9 837 Pfam PF00270 DEAD/DEAH box helicase 52 212 6.0E-21 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_19755 585b74d85363c88ae1ba4adba89d0fc9 837 Pfam PF00271 Helicase conserved C-terminal domain 263 365 4.1E-17 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_19755 585b74d85363c88ae1ba4adba89d0fc9 837 SUPERFAMILY SSF52540 56 376 3.35E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_06600 24a9147d12ed4acb763c5dae41f5dd8a 318 Gene3D G3DSA:1.10.10.10 2 57 3.3E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_06600 24a9147d12ed4acb763c5dae41f5dd8a 318 Pfam PF04198 Putative sugar-binding domain 62 317 3.4E-67 T 13-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 ambt_06600 24a9147d12ed4acb763c5dae41f5dd8a 318 SUPERFAMILY SSF100950 62 317 2.09E-63 T 13-10-2018 IPR037171 NagB/RpiA transferase-like ambt_06600 24a9147d12ed4acb763c5dae41f5dd8a 318 Gene3D G3DSA:3.40.50.1360 58 317 1.2E-64 T 13-10-2018 ambt_14065 197876cb67d9f2ea10ff0426aca3d91b 608 Gene3D G3DSA:2.60.40.10 57 152 2.5E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_14065 197876cb67d9f2ea10ff0426aca3d91b 608 Pfam PF07603 Protein of unknown function (DUF1566) 449 605 3.7E-28 T 13-10-2018 IPR011460 Protein of unknown function DUF1566 ambt_14065 197876cb67d9f2ea10ff0426aca3d91b 608 SUPERFAMILY SSF49299 186 255 1.92E-5 T 13-10-2018 IPR035986 PKD domain superfamily ambt_14065 197876cb67d9f2ea10ff0426aca3d91b 608 Gene3D G3DSA:2.60.40.10 169 254 2.3E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_14065 197876cb67d9f2ea10ff0426aca3d91b 608 Gene3D G3DSA:2.60.40.10 269 371 1.7E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_14065 197876cb67d9f2ea10ff0426aca3d91b 608 Pfam PF02010 REJ domain 85 320 2.9E-5 T 13-10-2018 IPR002859 PKD/REJ-like domain ambt_07900 44857e171692e49f13ad966851f1f9e9 466 SMART SM00490 260 341 1.1E-30 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_07900 44857e171692e49f13ad966851f1f9e9 466 Gene3D G3DSA:3.40.50.300 213 425 1.9E-47 T 13-10-2018 ambt_07900 44857e171692e49f13ad966851f1f9e9 466 Pfam PF00270 DEAD/DEAH box helicase 25 190 7.9E-47 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_07900 44857e171692e49f13ad966851f1f9e9 466 Gene3D G3DSA:3.40.50.300 2 212 3.4E-67 T 13-10-2018 ambt_07900 44857e171692e49f13ad966851f1f9e9 466 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ambt_07900 44857e171692e49f13ad966851f1f9e9 466 SUPERFAMILY SSF52540 73 361 4.21E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_07900 44857e171692e49f13ad966851f1f9e9 466 SMART SM00487 20 223 1.8E-51 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_07900 44857e171692e49f13ad966851f1f9e9 466 Pfam PF00271 Helicase conserved C-terminal domain 236 341 6.5E-30 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_16755 3a9f2309e34c4f6701d6fa5ec7352d43 391 SMART SM00283 104 346 1.7E-6 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_16755 3a9f2309e34c4f6701d6fa5ec7352d43 391 Gene3D G3DSA:1.10.287.950 57 372 1.1E-38 T 13-10-2018 ambt_16755 3a9f2309e34c4f6701d6fa5ec7352d43 391 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 173 299 7.7E-27 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_16755 3a9f2309e34c4f6701d6fa5ec7352d43 391 SUPERFAMILY SSF58104 127 323 1.7E-37 T 13-10-2018 ambt_02310 31334ace7c6ae3785e4eb4b71404dec3 248 Gene3D G3DSA:1.20.120.530 94 231 2.7E-26 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_02310 31334ace7c6ae3785e4eb4b71404dec3 248 Pfam PF07729 FCD domain 96 223 4.7E-21 T 13-10-2018 IPR011711 GntR, C-terminal ambt_02310 31334ace7c6ae3785e4eb4b71404dec3 248 SMART SM00895 96 224 3.8E-18 T 13-10-2018 IPR011711 GntR, C-terminal ambt_02310 31334ace7c6ae3785e4eb4b71404dec3 248 SMART SM00345 12 71 4.4E-24 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_02310 31334ace7c6ae3785e4eb4b71404dec3 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.8E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_02310 31334ace7c6ae3785e4eb4b71404dec3 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.8E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_02310 31334ace7c6ae3785e4eb4b71404dec3 248 SUPERFAMILY SSF46785 4 74 2.11E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_02310 31334ace7c6ae3785e4eb4b71404dec3 248 SUPERFAMILY SSF48008 92 230 1.88E-22 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_02310 31334ace7c6ae3785e4eb4b71404dec3 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 7.9E-23 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_02310 31334ace7c6ae3785e4eb4b71404dec3 248 Gene3D G3DSA:1.10.10.10 1 75 2.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 SUPERFAMILY SSF52172 8 144 1.85E-18 T 13-10-2018 IPR011006 CheY-like superfamily ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 SUPERFAMILY SSF48452 167 286 8.67E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 Gene3D G3DSA:1.25.40.10 323 511 2.0E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 Gene3D G3DSA:3.40.50.2300 4 139 1.3E-17 T 13-10-2018 ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 Gene3D G3DSA:1.25.40.10 140 298 5.6E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 Pfam PF00072 Response regulator receiver domain 12 125 7.8E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 SUPERFAMILY SSF48452 360 506 4.56E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 SMART SM00028 390 423 370.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 SMART SM00028 168 201 52.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 SMART SM00028 235 268 25.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 SMART SM00028 448 481 47.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_11765 09a83247646dc79b1a5b8edc303c7f5f 541 SMART SM00448 9 125 4.7E-13 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_14730 c02cd3297a0dd88a0d5bac299636b189 318 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 35 108 6.2E-29 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ambt_14730 c02cd3297a0dd88a0d5bac299636b189 318 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 201 262 5.0E-7 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ambt_14730 c02cd3297a0dd88a0d5bac299636b189 318 SUPERFAMILY SSF101386 170 266 8.97E-23 T 13-10-2018 ambt_14730 c02cd3297a0dd88a0d5bac299636b189 318 Gene3D G3DSA:1.10.287.1080 8 135 3.1E-47 T 13-10-2018 ambt_14730 c02cd3297a0dd88a0d5bac299636b189 318 SUPERFAMILY SSF101386 11 113 2.8E-24 T 13-10-2018 ambt_14730 c02cd3297a0dd88a0d5bac299636b189 318 TIGRFAM TIGR00444 mazG: MazG family protein 18 270 1.1E-90 T 13-10-2018 IPR011551 NTP pyrophosphohydrolase MazG ambt_14730 c02cd3297a0dd88a0d5bac299636b189 318 Gene3D G3DSA:1.10.287.1080 163 315 8.1E-41 T 13-10-2018 ambt_04555 02e6382af7beb8087bb9a625dad71b6b 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 1.8E-33 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ambt_04555 02e6382af7beb8087bb9a625dad71b6b 108 PIRSF PIRSF004555 3 108 2.2E-38 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ambt_04555 02e6382af7beb8087bb9a625dad71b6b 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 1.1E-34 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ambt_04555 02e6382af7beb8087bb9a625dad71b6b 108 Gene3D G3DSA:3.30.1310.10 1 108 2.1E-45 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily ambt_04555 02e6382af7beb8087bb9a625dad71b6b 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 22.958 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ambt_04555 02e6382af7beb8087bb9a625dad71b6b 108 SUPERFAMILY SSF82607 10 102 1.96E-35 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily ambt_20850 8a4e8f30569a123a6a239b264954642d 79 Pfam PF11660 Protein of unknown function (DUF3262) 4 78 1.7E-22 T 13-10-2018 IPR021676 Protein of unknown function DUF3262 ambt_20850 8a4e8f30569a123a6a239b264954642d 79 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 5 78 3.5E-12 T 13-10-2018 IPR021676 Protein of unknown function DUF3262 ambt_13340 649a3cf2b12baafe8162d1b98b2bf984 349 Gene3D G3DSA:3.20.20.70 3 278 8.8E-94 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_13340 649a3cf2b12baafe8162d1b98b2bf984 349 SUPERFAMILY SSF51269 286 349 1.7E-15 T 13-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 ambt_13340 649a3cf2b12baafe8162d1b98b2bf984 349 Pfam PF08666 SAF domain 293 348 2.2E-7 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ambt_13340 649a3cf2b12baafe8162d1b98b2bf984 349 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 16 344 3.1E-146 T 13-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 ambt_13340 649a3cf2b12baafe8162d1b98b2bf984 349 Gene3D G3DSA:3.90.1210.10 282 349 2.1E-17 T 13-10-2018 ambt_13340 649a3cf2b12baafe8162d1b98b2bf984 349 SMART SM00858 292 349 2.2E-5 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ambt_13340 649a3cf2b12baafe8162d1b98b2bf984 349 SUPERFAMILY SSF51569 4 302 8.06E-91 T 13-10-2018 ambt_13340 649a3cf2b12baafe8162d1b98b2bf984 349 Pfam PF03102 NeuB family 37 277 5.3E-91 T 13-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 ambt_00600 23bc14f32cdb75ed164d03ff0690524e 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 134 9.8E-32 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ambt_00600 23bc14f32cdb75ed164d03ff0690524e 135 Gene3D G3DSA:3.30.420.270 62 130 2.1E-10 T 13-10-2018 ambt_05590 d3a063446a84cf22d54b9477fcf848b2 197 Gene3D G3DSA:3.30.1060.10 12 183 7.3E-49 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ambt_05590 d3a063446a84cf22d54b9477fcf848b2 197 SUPERFAMILY SSF55068 8 185 1.31E-58 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ambt_05590 d3a063446a84cf22d54b9477fcf848b2 197 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 23 172 4.8E-38 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ambt_05590 d3a063446a84cf22d54b9477fcf848b2 197 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 21 179 28.645 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ambt_05590 d3a063446a84cf22d54b9477fcf848b2 197 Pfam PF01625 Peptide methionine sulfoxide reductase 24 173 2.7E-45 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ambt_14280 209af62ecb28302f5fb4ebd32bb53ea5 142 Gene3D G3DSA:3.30.300.20 49 142 5.8E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta ambt_14280 209af62ecb28302f5fb4ebd32bb53ea5 142 Gene3D G3DSA:2.20.25.10 1 48 5.1E-20 T 13-10-2018 ambt_14280 209af62ecb28302f5fb4ebd32bb53ea5 142 SUPERFAMILY SSF82784 6 141 1.83E-40 T 13-10-2018 IPR036102 OsmC/Ohr superfamily ambt_14280 209af62ecb28302f5fb4ebd32bb53ea5 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 141 2.0E-54 T 13-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 ambt_14280 209af62ecb28302f5fb4ebd32bb53ea5 142 Pfam PF02566 OsmC-like protein 44 139 3.9E-19 T 13-10-2018 IPR003718 OsmC/Ohr family ambt_09325 1b669b1475fdb0dc03e2b95eef8e3044 220 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 13 207 18.956 T 13-10-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 ambt_09325 1b669b1475fdb0dc03e2b95eef8e3044 220 Pfam PF01794 Ferric reductase like transmembrane component 54 167 3.5E-16 T 13-10-2018 IPR013130 Ferric reductase transmembrane component-like domain ambt_18890 2dbc76dc0a03d48fce5823a0c136fd8d 292 Gene3D G3DSA:3.90.550.10 1 292 3.4E-85 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18890 2dbc76dc0a03d48fce5823a0c136fd8d 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 3 287 5.8E-149 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 ambt_18890 2dbc76dc0a03d48fce5823a0c136fd8d 292 SUPERFAMILY SSF53448 2 287 1.82E-88 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18890 2dbc76dc0a03d48fce5823a0c136fd8d 292 Pfam PF00483 Nucleotidyl transferase 3 239 2.8E-70 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ambt_03025 76dc1b38462523113ca3071492a5c4af 426 Pfam PF07690 Major Facilitator Superfamily 20 355 6.1E-39 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_03025 76dc1b38462523113ca3071492a5c4af 426 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 84 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ambt_03025 76dc1b38462523113ca3071492a5c4af 426 Gene3D G3DSA:1.20.1250.20 11 199 7.8E-33 T 13-10-2018 ambt_03025 76dc1b38462523113ca3071492a5c4af 426 Gene3D G3DSA:1.20.1250.20 206 406 4.9E-30 T 13-10-2018 ambt_03025 76dc1b38462523113ca3071492a5c4af 426 SUPERFAMILY SSF103473 9 402 9.16E-54 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_14845 058d9e43465fd01c131211950d93a564 440 Gene3D G3DSA:2.120.10.30 68 430 7.5E-79 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_14845 058d9e43465fd01c131211950d93a564 440 Pfam PF07995 Glucose / Sorbosone dehydrogenase 84 425 4.7E-89 T 13-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase ambt_14845 058d9e43465fd01c131211950d93a564 440 SUPERFAMILY SSF50952 72 422 4.45E-30 T 13-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ambt_05300 c2f9adcb3744b7e2c02880cb2c32bf36 227 Gene3D G3DSA:3.60.40.10 4 227 1.3E-14 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_05300 c2f9adcb3744b7e2c02880cb2c32bf36 227 SUPERFAMILY SSF81606 11 226 2.75E-16 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_11505 8f44803be9710908af6b1755893b3672 166 PIRSF PIRSF000027 13 166 2.4E-32 T 13-10-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 ambt_11505 8f44803be9710908af6b1755893b3672 166 SUPERFAMILY SSF47175 41 164 1.03E-31 T 13-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 ambt_11505 8f44803be9710908af6b1755893b3672 166 PRINTS PR00608 Class II cytochrome C signature 153 164 2.9E-7 T 13-10-2018 IPR015984 Cytochrome c prime, subgroup ambt_11505 8f44803be9710908af6b1755893b3672 166 PRINTS PR00608 Class II cytochrome C signature 130 153 2.9E-7 T 13-10-2018 IPR015984 Cytochrome c prime, subgroup ambt_11505 8f44803be9710908af6b1755893b3672 166 Gene3D G3DSA:1.20.120.10 38 166 7.1E-32 T 13-10-2018 ambt_11505 8f44803be9710908af6b1755893b3672 166 Pfam PF01322 Cytochrome C' 44 164 1.4E-29 T 13-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 ambt_06785 73bc47d5a6be122a0f146588fd974867 379 SUPERFAMILY SSF63829 60 368 3.6E-44 T 13-10-2018 ambt_06785 73bc47d5a6be122a0f146588fd974867 379 Gene3D G3DSA:2.120.10.30 57 376 6.6E-73 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_06785 73bc47d5a6be122a0f146588fd974867 379 Pfam PF03088 Strictosidine synthase 159 252 3.3E-23 T 13-10-2018 IPR018119 Strictosidine synthase, conserved region GO:0009058|GO:0016844 ambt_08020 6f3c351f928a600fdd2d36884562a46d 230 Pfam PF04352 ProQ/FINO family 15 122 2.2E-40 T 13-10-2018 IPR016103 ProQ/FinO domain ambt_08020 6f3c351f928a600fdd2d36884562a46d 230 SUPERFAMILY SSF48657 10 125 3.79E-35 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily ambt_08020 6f3c351f928a600fdd2d36884562a46d 230 Pfam PF17516 ProQ C-terminal domain 176 223 2.7E-22 T 13-10-2018 IPR035236 RNA chaperone ProQ, C-terminal ambt_08020 6f3c351f928a600fdd2d36884562a46d 230 Hamap MF_00749 RNA chaperone ProQ [proQ]. 9 225 26.53 T 13-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 ambt_08020 6f3c351f928a600fdd2d36884562a46d 230 Gene3D G3DSA:1.10.1710.10 3 128 9.1E-21 T 13-10-2018 IPR036442 ProQ/FinO domain superfamily ambt_08020 6f3c351f928a600fdd2d36884562a46d 230 SMART SM00945 12 126 1.5E-56 T 13-10-2018 IPR016103 ProQ/FinO domain ambt_19170 320de945527f786e01d3fcd5b5d75059 495 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 9.4E-176 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 ambt_19170 320de945527f786e01d3fcd5b5d75059 495 Gene3D G3DSA:1.20.5.570 455 493 7.0E-16 T 13-10-2018 ambt_19170 320de945527f786e01d3fcd5b5d75059 495 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 487 73.536 T 13-10-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 ambt_19170 320de945527f786e01d3fcd5b5d75059 495 Gene3D G3DSA:3.40.1670.10 337 454 1.1E-52 T 13-10-2018 ambt_19170 320de945527f786e01d3fcd5b5d75059 495 SUPERFAMILY SSF50475 3 322 5.1E-130 T 13-10-2018 ambt_19170 320de945527f786e01d3fcd5b5d75059 495 SUPERFAMILY SSF143968 323 487 6.8E-69 T 13-10-2018 ambt_19170 320de945527f786e01d3fcd5b5d75059 495 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 2.4E-180 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 ambt_11670 a1544e155c45df2aeee3bd0772854d97 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 35.757 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ambt_11670 a1544e155c45df2aeee3bd0772854d97 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ambt_11670 a1544e155c45df2aeee3bd0772854d97 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 4.4E-95 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ambt_11670 a1544e155c45df2aeee3bd0772854d97 269 SUPERFAMILY SSF51366 1 266 2.35E-85 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ambt_11670 a1544e155c45df2aeee3bd0772854d97 269 Gene3D G3DSA:3.20.20.70 1 268 1.1E-91 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_11670 a1544e155c45df2aeee3bd0772854d97 269 Pfam PF00290 Tryptophan synthase alpha chain 8 266 8.3E-88 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ambt_20460 b3b499ca0eb82a5ca6db805f17a747c3 330 Pfam PF00296 Luciferase-like monooxygenase 21 300 2.0E-37 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ambt_20460 b3b499ca0eb82a5ca6db805f17a747c3 330 SUPERFAMILY SSF51679 3 327 2.62E-85 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ambt_20460 b3b499ca0eb82a5ca6db805f17a747c3 330 Gene3D G3DSA:3.20.20.30 1 329 7.7E-95 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ambt_20460 b3b499ca0eb82a5ca6db805f17a747c3 330 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 327 1.3E-129 T 13-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 ambt_06890 ca69f9aaf741fa70f377ff98575f8f24 321 SUPERFAMILY SSF46785 1 86 4.99E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_06890 ca69f9aaf741fa70f377ff98575f8f24 321 SUPERFAMILY SSF53850 88 300 4.71E-28 T 13-10-2018 ambt_06890 ca69f9aaf741fa70f377ff98575f8f24 321 Gene3D G3DSA:3.40.190.290 90 298 8.1E-43 T 13-10-2018 ambt_06890 ca69f9aaf741fa70f377ff98575f8f24 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06890 ca69f9aaf741fa70f377ff98575f8f24 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06890 ca69f9aaf741fa70f377ff98575f8f24 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06890 ca69f9aaf741fa70f377ff98575f8f24 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06890 ca69f9aaf741fa70f377ff98575f8f24 321 Pfam PF03466 LysR substrate binding domain 87 296 2.0E-26 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_06890 ca69f9aaf741fa70f377ff98575f8f24 321 Gene3D G3DSA:1.10.10.10 1 89 1.2E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_16980 28feee78174f65fbba4ec15a73c48306 404 Pfam PF00589 Phage integrase family 173 317 1.7E-27 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_16980 28feee78174f65fbba4ec15a73c48306 404 Gene3D G3DSA:1.10.443.10 148 331 1.1E-29 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_16980 28feee78174f65fbba4ec15a73c48306 404 SUPERFAMILY SSF56349 63 324 3.83E-42 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_16940 7f492172722c4a0a4f82ff1f27b83906 1037 SUPERFAMILY SSF52540 110 278 3.6E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_16940 7f492172722c4a0a4f82ff1f27b83906 1037 Pfam PF04851 Type III restriction enzyme, res subunit 10 268 3.8E-15 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ambt_16940 7f492172722c4a0a4f82ff1f27b83906 1037 SUPERFAMILY SSF52540 108 585 3.19E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_16940 7f492172722c4a0a4f82ff1f27b83906 1037 Gene3D G3DSA:3.40.50.300 99 289 4.9E-13 T 13-10-2018 ambt_03295 39874daaff712aed67d3b600876f8027 108 Pfam PF09278 MerR, DNA binding 7 72 4.4E-14 T 13-10-2018 IPR015358 Transcription regulator MerR, DNA binding ambt_03295 39874daaff712aed67d3b600876f8027 108 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 103 9.5E-37 T 13-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 ambt_03295 39874daaff712aed67d3b600876f8027 108 SUPERFAMILY SSF46955 6 90 6.41E-18 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily ambt_03295 39874daaff712aed67d3b600876f8027 108 Gene3D G3DSA:1.10.1660.10 1 88 3.8E-14 T 13-10-2018 ambt_05020 3ad918721b6f91970a06a5f113e4534a 708 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 4 699 24.636 T 13-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 ambt_05020 3ad918721b6f91970a06a5f113e4534a 708 Gene3D G3DSA:3.30.9.10 367 611 3.0E-115 T 13-10-2018 ambt_05020 3ad918721b6f91970a06a5f113e4534a 708 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 241 6.1E-44 T 13-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 ambt_05020 3ad918721b6f91970a06a5f113e4534a 708 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 272 703 1.9E-99 T 13-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 ambt_05020 3ad918721b6f91970a06a5f113e4534a 708 SUPERFAMILY SSF51905 272 581 1.75E-20 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_05020 3ad918721b6f91970a06a5f113e4534a 708 Gene3D G3DSA:3.50.50.60 272 701 3.0E-115 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_05020 3ad918721b6f91970a06a5f113e4534a 708 Gene3D G3DSA:3.40.50.150 6 251 8.2E-98 T 13-10-2018 ambt_05020 3ad918721b6f91970a06a5f113e4534a 708 Pfam PF01266 FAD dependent oxidoreductase 272 674 6.6E-28 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ambt_05065 5c4b5e4ed2e94c8f389771c21953f82a 281 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 36.558 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_05065 5c4b5e4ed2e94c8f389771c21953f82a 281 SUPERFAMILY SSF52096 23 280 4.66E-87 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_05065 5c4b5e4ed2e94c8f389771c21953f82a 281 Pfam PF01039 Carboxyl transferase domain 56 238 3.9E-17 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ambt_05065 5c4b5e4ed2e94c8f389771c21953f82a 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 7.6E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_05065 5c4b5e4ed2e94c8f389771c21953f82a 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 7.6E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_05065 5c4b5e4ed2e94c8f389771c21953f82a 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 7.6E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_05065 5c4b5e4ed2e94c8f389771c21953f82a 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 7.6E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_05065 5c4b5e4ed2e94c8f389771c21953f82a 281 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 7.6E-37 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_05065 5c4b5e4ed2e94c8f389771c21953f82a 281 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 280 3.1E-133 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ambt_05065 5c4b5e4ed2e94c8f389771c21953f82a 281 Gene3D G3DSA:3.90.226.10 23 281 1.1E-86 T 13-10-2018 ambt_06030 e06bf347a558ddf0f3a8f555eaf43a09 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 213 30.66 T 13-10-2018 IPR007432 Protein of unknown function DUF480 ambt_06030 e06bf347a558ddf0f3a8f555eaf43a09 215 Gene3D G3DSA:1.10.10.10 95 174 9.0E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_06030 e06bf347a558ddf0f3a8f555eaf43a09 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 1.6E-58 T 13-10-2018 IPR007432 Protein of unknown function DUF480 ambt_06030 e06bf347a558ddf0f3a8f555eaf43a09 215 Gene3D G3DSA:1.10.10.10 1 89 2.5E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_06030 e06bf347a558ddf0f3a8f555eaf43a09 215 SUPERFAMILY SSF46785 2 84 1.27E-28 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_06030 e06bf347a558ddf0f3a8f555eaf43a09 215 SUPERFAMILY SSF46785 90 170 5.44E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_18325 92fd2d63532a5176e8052c70b4d332fb 218 Gene3D G3DSA:3.40.50.1820 2 218 3.2E-68 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_18325 92fd2d63532a5176e8052c70b4d332fb 218 Pfam PF02230 Phospholipase/Carboxylesterase 7 216 1.6E-58 T 13-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 ambt_18325 92fd2d63532a5176e8052c70b4d332fb 218 SUPERFAMILY SSF53474 2 217 2.55E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 Gene3D G3DSA:3.30.390.30 582 702 2.0E-36 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 Gene3D G3DSA:3.50.50.60 388 513 4.8E-101 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 Pfam PF09335 SNARE associated Golgi protein 67 183 1.4E-24 T 13-10-2018 IPR032816 SNARE associated Golgi protein ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 Gene3D G3DSA:3.50.50.60 239 566 4.8E-101 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 666 686 1.1E-55 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 260 1.1E-55 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 579 600 1.1E-55 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 285 1.1E-55 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 541 548 1.1E-55 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 500 514 1.1E-55 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 437 1.1E-55 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 381 1.1E-55 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 644 659 1.1E-55 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 583 690 1.6E-26 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 SUPERFAMILY SSF55424 579 693 1.89E-33 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 238 561 9.9E-61 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 271 281 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 526 548 1.0E-28 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 412 430 1.0E-28 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 499 515 1.0E-28 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 258 1.0E-28 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 369 387 1.0E-28 T 13-10-2018 ambt_06820 39dcd08a1b7f31705101e635b936fc16 717 SUPERFAMILY SSF51905 239 615 1.64E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_04410 fc689b5cd63d48da1a359924aaaa519f 309 Pfam PF00691 OmpA family 188 287 1.0E-13 T 13-10-2018 IPR006665 OmpA-like domain ambt_04410 fc689b5cd63d48da1a359924aaaa519f 309 Gene3D G3DSA:3.30.1330.60 146 295 2.1E-41 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_04410 fc689b5cd63d48da1a359924aaaa519f 309 SUPERFAMILY SSF103088 175 293 2.88E-25 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_04410 fc689b5cd63d48da1a359924aaaa519f 309 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 1.7E-18 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain ambt_18660 61bb34126e736b61e98c6ec3d083a197 105 SMART SM00450 5 100 1.6E-16 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_18660 61bb34126e736b61e98c6ec3d083a197 105 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 103 28.357 T 13-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 ambt_18660 61bb34126e736b61e98c6ec3d083a197 105 Gene3D G3DSA:3.40.250.10 1 100 8.5E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_18660 61bb34126e736b61e98c6ec3d083a197 105 SUPERFAMILY SSF52821 4 95 1.83E-25 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_18660 61bb34126e736b61e98c6ec3d083a197 105 Pfam PF00581 Rhodanese-like domain 17 95 5.7E-15 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_17955 de350c82a8867562d99618953a227007 503 Pfam PF02661 Fic/DOC family 389 461 2.9E-11 T 13-10-2018 IPR003812 Fido domain ambt_17955 de350c82a8867562d99618953a227007 503 Gene3D G3DSA:1.10.3290.10 263 503 2.6E-43 T 13-10-2018 IPR036597 Fido-like domain superfamily ambt_17955 de350c82a8867562d99618953a227007 503 SUPERFAMILY SSF140931 331 502 2.88E-29 T 13-10-2018 IPR036597 Fido-like domain superfamily ambt_16695 a82814f695da9a30591c5491194a7c65 753 SUPERFAMILY SSF56935 26 752 4.03E-76 T 13-10-2018 ambt_16695 a82814f695da9a30591c5491194a7c65 753 Gene3D G3DSA:2.170.130.10 38 163 2.5E-8 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_16695 a82814f695da9a30591c5491194a7c65 753 Pfam PF00593 TonB dependent receptor 256 750 2.8E-23 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_16695 a82814f695da9a30591c5491194a7c65 753 Gene3D G3DSA:2.40.170.20 178 752 4.0E-53 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_16695 a82814f695da9a30591c5491194a7c65 753 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 153 2.3E-9 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_20840 69944ca895fc551a5b411d0d67174d66 120 TIGRFAM TIGR03750 conj_TIGR03750: conjugative transfer region protein, TIGR03750 family 7 116 5.3E-28 T 13-10-2018 IPR021877 Protein of unknown function DUF3487 ambt_20840 69944ca895fc551a5b411d0d67174d66 120 Pfam PF11990 Protein of unknown function (DUF3487) 6 117 1.3E-35 T 13-10-2018 IPR021877 Protein of unknown function DUF3487 ambt_16110 9ca783a8f1915a36b21cbc7b31043175 296 Pfam PF12146 Serine aminopeptidase, S33 26 114 2.9E-10 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 ambt_16110 9ca783a8f1915a36b21cbc7b31043175 296 SUPERFAMILY SSF53474 5 284 3.05E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_16110 9ca783a8f1915a36b21cbc7b31043175 296 PIRSF PIRSF037442 1 284 1.6E-72 T 13-10-2018 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 ambt_16110 9ca783a8f1915a36b21cbc7b31043175 296 Gene3D G3DSA:3.40.50.1820 4 285 1.6E-19 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_11680 ad7cafc384e743fbded4f161f1c5a820 154 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 7 137 1.6E-26 T 13-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain ambt_11680 ad7cafc384e743fbded4f161f1c5a820 154 SUPERFAMILY SSF50475 5 128 2.32E-18 T 13-10-2018 ambt_11680 ad7cafc384e743fbded4f161f1c5a820 154 Gene3D G3DSA:2.30.110.10 2 154 4.2E-28 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ambt_02980 253c95fd543d94d60d2f9a54cf1e867d 407 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 320 385 5.0E-15 T 13-10-2018 IPR006260 TonB/TolA, C-terminal ambt_02980 253c95fd543d94d60d2f9a54cf1e867d 407 Pfam PF05569 BlaR1 peptidase M56 78 267 2.2E-36 T 13-10-2018 IPR008756 Peptidase M56 ambt_02980 253c95fd543d94d60d2f9a54cf1e867d 407 PRINTS PR01374 Gram-negative bacterial tonB protein signature 354 371 4.2E-9 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_02980 253c95fd543d94d60d2f9a54cf1e867d 407 PRINTS PR01374 Gram-negative bacterial tonB protein signature 314 335 4.2E-9 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_02980 253c95fd543d94d60d2f9a54cf1e867d 407 PRINTS PR01374 Gram-negative bacterial tonB protein signature 335 353 4.2E-9 T 13-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ambt_02980 253c95fd543d94d60d2f9a54cf1e867d 407 Gene3D G3DSA:3.30.2420.10 313 397 5.0E-22 T 13-10-2018 ambt_02980 253c95fd543d94d60d2f9a54cf1e867d 407 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 319 397 9.9E-19 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 ambt_02980 253c95fd543d94d60d2f9a54cf1e867d 407 SUPERFAMILY SSF74653 313 388 1.06E-20 T 13-10-2018 ambt_04845 26a03f1b5ab87a64c32bdc941e998ceb 402 Pfam PF04286 Protein of unknown function (DUF445) 16 94 8.0E-10 T 13-10-2018 IPR007383 Protein of unknown function DUF445 ambt_08560 7c985558f25408793431093bf1f92c64 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 3.1E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_08560 7c985558f25408793431093bf1f92c64 237 Gene3D G3DSA:1.10.10.10 133 237 6.2E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_08560 7c985558f25408793431093bf1f92c64 237 SUPERFAMILY SSF46894 135 233 3.97E-31 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_08560 7c985558f25408793431093bf1f92c64 237 Pfam PF00072 Response regulator receiver domain 5 114 3.4E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_08560 7c985558f25408793431093bf1f92c64 237 SUPERFAMILY SSF52172 4 134 1.34E-36 T 13-10-2018 IPR011006 CheY-like superfamily ambt_08560 7c985558f25408793431093bf1f92c64 237 Gene3D G3DSA:3.40.50.2300 2 132 2.1E-33 T 13-10-2018 ambt_08560 7c985558f25408793431093bf1f92c64 237 SMART SM00448 3 114 5.0E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_08560 7c985558f25408793431093bf1f92c64 237 SMART SM00862 156 232 3.4E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_02155 86137228ebeda2ab22aa6f91a7e0a5cf 255 Pfam PF07277 SapC 8 224 3.5E-66 T 13-10-2018 IPR010836 SapC ambt_08975 11660f170952c8d5c26be6b1274f8c47 454 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 424 4.0E-97 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_08975 11660f170952c8d5c26be6b1274f8c47 454 PIRSF PIRSF006603 2 453 5.5E-62 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_08975 11660f170952c8d5c26be6b1274f8c47 454 Pfam PF01554 MatE 19 178 2.0E-28 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_08975 11660f170952c8d5c26be6b1274f8c47 454 Pfam PF01554 MatE 245 406 1.0E-32 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_20570 b1fd73c6ca06509a876ec46405d00697 382 SUPERFAMILY SSF56601 39 377 2.11E-61 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ambt_20570 b1fd73c6ca06509a876ec46405d00697 382 Gene3D G3DSA:3.40.710.10 37 378 8.4E-61 T 13-10-2018 ambt_20570 b1fd73c6ca06509a876ec46405d00697 382 Pfam PF00144 Beta-lactamase 39 360 8.4E-45 T 13-10-2018 IPR001466 Beta-lactamase-related ambt_05060 8cc698591e217bb8110386f5610d6664 263 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 34.986 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_05060 8cc698591e217bb8110386f5610d6664 263 Gene3D G3DSA:3.30.70.580 1 105 4.8E-37 T 13-10-2018 ambt_05060 8cc698591e217bb8110386f5610d6664 263 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 239 6.9E-74 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_05060 8cc698591e217bb8110386f5610d6664 263 Pfam PF01416 tRNA pseudouridine synthase 143 245 1.6E-29 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_05060 8cc698591e217bb8110386f5610d6664 263 Pfam PF01416 tRNA pseudouridine synthase 9 103 1.6E-6 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_05060 8cc698591e217bb8110386f5610d6664 263 SUPERFAMILY SSF55120 2 256 1.28E-89 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_05060 8cc698591e217bb8110386f5610d6664 263 Gene3D G3DSA:3.30.70.660 106 243 6.0E-49 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 ambt_05060 8cc698591e217bb8110386f5610d6664 263 PIRSF PIRSF001430 1 254 1.9E-76 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_04090 3e23e4e796234de85a66ab241512df59 578 SUPERFAMILY SSF69593 30 252 1.7E-12 T 13-10-2018 ambt_04090 3e23e4e796234de85a66ab241512df59 578 SMART SM00563 81 198 3.9E-5 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_04090 3e23e4e796234de85a66ab241512df59 578 Pfam PF01553 Acyltransferase 70 195 2.6E-9 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_04090 3e23e4e796234de85a66ab241512df59 578 Pfam PF13444 Acetyltransferase (GNAT) domain 324 426 5.1E-22 T 13-10-2018 ambt_04090 3e23e4e796234de85a66ab241512df59 578 SUPERFAMILY SSF55729 306 452 4.24E-21 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_13500 30d91e1b6058635f1ed5d8776aec80bb 229 Pfam PF13860 FlgD Ig-like domain 118 181 1.1E-17 T 13-10-2018 IPR025965 FlgD Ig-like domain ambt_13500 30d91e1b6058635f1ed5d8776aec80bb 229 Gene3D G3DSA:2.60.40.4070 105 192 5.1E-35 T 13-10-2018 ambt_13500 30d91e1b6058635f1ed5d8776aec80bb 229 Pfam PF03963 Flagellar hook capping protein - N-terminal region 23 80 3.7E-21 T 13-10-2018 IPR005648 Flagellar hook capping protein ambt_13500 30d91e1b6058635f1ed5d8776aec80bb 229 Pfam PF13861 FlgD Tudor-like domain 88 224 5.9E-15 T 13-10-2018 IPR025963 FlgD Tudor-like domain ambt_13500 30d91e1b6058635f1ed5d8776aec80bb 229 Gene3D G3DSA:2.30.30.910 89 222 5.1E-35 T 13-10-2018 ambt_01490 75311a40fef392549d4f49910ab5499b 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 2.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_01490 75311a40fef392549d4f49910ab5499b 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 2.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_01490 75311a40fef392549d4f49910ab5499b 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 2.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_01490 75311a40fef392549d4f49910ab5499b 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 2.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_01490 75311a40fef392549d4f49910ab5499b 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 2.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_01490 75311a40fef392549d4f49910ab5499b 609 SUPERFAMILY SSF54980 306 391 1.29E-14 T 13-10-2018 IPR035647 EF-G domain III/V-like ambt_01490 75311a40fef392549d4f49910ab5499b 609 Gene3D G3DSA:3.40.50.300 5 202 2.9E-69 T 13-10-2018 ambt_01490 75311a40fef392549d4f49910ab5499b 609 SUPERFAMILY SSF52540 5 211 4.08E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_01490 75311a40fef392549d4f49910ab5499b 609 Gene3D G3DSA:2.40.50.250 487 603 2.3E-129 T 13-10-2018 ambt_01490 75311a40fef392549d4f49910ab5499b 609 Gene3D G3DSA:3.30.70.870 310 594 2.3E-129 T 13-10-2018 ambt_01490 75311a40fef392549d4f49910ab5499b 609 Pfam PF00679 Elongation factor G C-terminus 401 481 7.2E-22 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like ambt_01490 75311a40fef392549d4f49910ab5499b 609 SUPERFAMILY SSF54980 402 516 2.11E-27 T 13-10-2018 IPR035647 EF-G domain III/V-like ambt_01490 75311a40fef392549d4f49910ab5499b 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 154 1.6E-25 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_01490 75311a40fef392549d4f49910ab5499b 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 1.2E-289 T 13-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 ambt_01490 75311a40fef392549d4f49910ab5499b 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 4.8E-9 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ambt_01490 75311a40fef392549d4f49910ab5499b 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site ambt_01490 75311a40fef392549d4f49910ab5499b 609 SUPERFAMILY SSF50447 155 303 2.14E-31 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_01490 75311a40fef392549d4f49910ab5499b 609 Gene3D G3DSA:2.40.30.10 203 303 1.5E-30 T 13-10-2018 ambt_01490 75311a40fef392549d4f49910ab5499b 609 Gene3D G3DSA:3.30.70.240 393 486 2.3E-129 T 13-10-2018 ambt_01490 75311a40fef392549d4f49910ab5499b 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 2.6E-56 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ambt_07165 3d23da575b1f932079455f225f874cc1 250 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 10 227 6.2E-37 T 13-10-2018 ambt_07165 3d23da575b1f932079455f225f874cc1 250 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 4 245 27.675 T 13-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 ambt_18460 cd5fc511fb6d2ab321539c67a81c2c0f 73 Gene3D G3DSA:3.10.20.30 4 73 1.8E-15 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_18460 cd5fc511fb6d2ab321539c67a81c2c0f 73 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 73 6.5E-16 T 13-10-2018 IPR010035 ThiS, thiamine-biosynthesis ambt_18460 cd5fc511fb6d2ab321539c67a81c2c0f 73 Pfam PF02597 ThiS family 7 73 1.6E-8 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 ambt_18460 cd5fc511fb6d2ab321539c67a81c2c0f 73 SUPERFAMILY SSF54285 4 73 2.29E-11 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ambt_14715 3f114d491d31f1f5d1c7ffafeeeae133 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.731 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ambt_14715 3f114d491d31f1f5d1c7ffafeeeae133 142 SUPERFAMILY SSF52161 1 140 4.45E-61 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 ambt_14715 3f114d491d31f1f5d1c7ffafeeeae133 142 Pfam PF00572 Ribosomal protein L13 15 138 1.7E-57 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ambt_14715 3f114d491d31f1f5d1c7ffafeeeae133 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 9.2E-65 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_14715 3f114d491d31f1f5d1c7ffafeeeae133 142 PIRSF PIRSF002181 1 142 1.4E-52 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ambt_14715 3f114d491d31f1f5d1c7ffafeeeae133 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 13-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 ambt_14715 3f114d491d31f1f5d1c7ffafeeeae133 142 Gene3D G3DSA:3.90.1180.10 1 142 1.1E-64 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 ambt_18225 ef52710a7541d4458155f93581371efc 634 Gene3D G3DSA:3.30.70.270 457 633 4.6E-51 T 13-10-2018 ambt_18225 ef52710a7541d4458155f93581371efc 634 SUPERFAMILY SSF48452 40 260 8.43E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_18225 ef52710a7541d4458155f93581371efc 634 SMART SM00028 234 270 100.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_18225 ef52710a7541d4458155f93581371efc 634 SMART SM00028 311 344 11.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_18225 ef52710a7541d4458155f93581371efc 634 SMART SM00028 194 227 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_18225 ef52710a7541d4458155f93581371efc 634 Pfam PF13424 Tetratricopeptide repeat 199 259 3.0E-11 T 13-10-2018 ambt_18225 ef52710a7541d4458155f93581371efc 634 SUPERFAMILY SSF55073 473 632 1.8E-43 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_18225 ef52710a7541d4458155f93581371efc 634 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 467 633 4.5E-47 T 13-10-2018 IPR000160 GGDEF domain ambt_18225 ef52710a7541d4458155f93581371efc 634 Pfam PF00990 Diguanylate cyclase, GGDEF domain 469 629 6.5E-43 T 13-10-2018 IPR000160 GGDEF domain ambt_18225 ef52710a7541d4458155f93581371efc 634 Gene3D G3DSA:1.25.40.10 74 261 4.0E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_18225 ef52710a7541d4458155f93581371efc 634 SMART SM00267 457 633 9.3E-51 T 13-10-2018 IPR000160 GGDEF domain ambt_18225 ef52710a7541d4458155f93581371efc 634 SUPERFAMILY SSF48452 199 387 2.37E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_18225 ef52710a7541d4458155f93581371efc 634 Gene3D G3DSA:1.25.40.10 262 355 1.6E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 Gene3D G3DSA:3.30.2090.10 179 270 3.4E-237 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 Gene3D G3DSA:3.30.70.1430 552 650 3.4E-237 T 13-10-2018 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 SUPERFAMILY SSF82693 40 135 6.8E-19 T 13-10-2018 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 SUPERFAMILY SSF82866 789 1008 4.97E-45 T 13-10-2018 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 SUPERFAMILY SSF82866 293 489 2.62E-32 T 13-10-2018 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 SUPERFAMILY SSF82693 136 325 4.19E-18 T 13-10-2018 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 Pfam PF00873 AcrB/AcrD/AcrF family 3 1004 2.0E-152 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 Gene3D G3DSA:1.20.1640.10 507 1002 3.4E-237 T 13-10-2018 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 Gene3D G3DSA:3.30.70.1440 651 850 3.4E-237 T 13-10-2018 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 SUPERFAMILY SSF82714 184 266 4.32E-6 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 2.4E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 2.4E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.4E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.4E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 2.4E-24 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 Gene3D G3DSA:3.30.70.1320 136 328 3.4E-237 T 13-10-2018 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 Gene3D G3DSA:1.20.1640.10 10 506 3.4E-237 T 13-10-2018 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 Gene3D G3DSA:3.30.70.1430 40 800 3.4E-237 T 13-10-2018 ambt_11925 9288a7f807d23ba53fb7fffd70134824 1014 Gene3D G3DSA:3.30.2090.10 702 792 3.4E-237 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_08085 6e84c2e9b00cd5654d4556db9ae69330 77 SUPERFAMILY SSF52833 1 77 8.3E-12 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_08085 6e84c2e9b00cd5654d4556db9ae69330 77 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 76 3.8E-12 T 13-10-2018 IPR008554 Glutaredoxin-like ambt_08085 6e84c2e9b00cd5654d4556db9ae69330 77 Gene3D G3DSA:3.40.30.10 1 77 3.0E-17 T 13-10-2018 ambt_14815 10190fb62e1f9c9f31c5749cfce3ec79 674 Gene3D G3DSA:1.10.287.950 344 674 2.6E-74 T 13-10-2018 ambt_14815 10190fb62e1f9c9f31c5749cfce3ec79 674 Pfam PF12729 Four helix bundle sensory module for signal transduction 3 128 1.7E-8 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ambt_14815 10190fb62e1f9c9f31c5749cfce3ec79 674 SMART SM00283 412 673 7.7E-64 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_14815 10190fb62e1f9c9f31c5749cfce3ec79 674 SMART SM00304 345 397 1.6E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_14815 10190fb62e1f9c9f31c5749cfce3ec79 674 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 484 639 1.1E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_14815 10190fb62e1f9c9f31c5749cfce3ec79 674 SUPERFAMILY SSF58104 365 674 6.02E-73 T 13-10-2018 ambt_09930 94d5177dd09ec43f5d3e135b272f3fcd 607 Gene3D G3DSA:1.10.1370.30 348 602 1.7E-5 T 13-10-2018 ambt_09930 94d5177dd09ec43f5d3e135b272f3fcd 607 Pfam PF01401 Angiotensin-converting enzyme 35 607 2.7E-206 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 ambt_09930 94d5177dd09ec43f5d3e135b272f3fcd 607 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 264 285 6.4E-78 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 ambt_09930 94d5177dd09ec43f5d3e135b272f3fcd 607 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 229 256 6.4E-78 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 ambt_09930 94d5177dd09ec43f5d3e135b272f3fcd 607 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 401 421 6.4E-78 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 ambt_09930 94d5177dd09ec43f5d3e135b272f3fcd 607 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 440 465 6.4E-78 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 ambt_09930 94d5177dd09ec43f5d3e135b272f3fcd 607 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 475 502 6.4E-78 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 ambt_09930 94d5177dd09ec43f5d3e135b272f3fcd 607 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 503 531 6.4E-78 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 ambt_09930 94d5177dd09ec43f5d3e135b272f3fcd 607 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 341 366 6.4E-78 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 ambt_09930 94d5177dd09ec43f5d3e135b272f3fcd 607 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 373 389 6.4E-78 T 13-10-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 ambt_09930 94d5177dd09ec43f5d3e135b272f3fcd 607 SUPERFAMILY SSF55486 36 607 3.15E-202 T 13-10-2018 ambt_05690 aa3531538b15e3fb99ab72a517d837cd 80 Pfam PF04325 Protein of unknown function (DUF465) 29 74 1.7E-11 T 13-10-2018 IPR007420 Protein of unknown function DUF465 ambt_05690 aa3531538b15e3fb99ab72a517d837cd 80 Gene3D G3DSA:1.20.58.660 11 80 1.2E-15 T 13-10-2018 ambt_15880 27f75041a021ab99df8e6ce3d8a8d8bb 522 Gene3D G3DSA:3.30.420.40 36 324 6.3E-79 T 13-10-2018 ambt_15880 27f75041a021ab99df8e6ce3d8a8d8bb 522 SUPERFAMILY SSF53067 159 330 8.03E-42 T 13-10-2018 ambt_15880 27f75041a021ab99df8e6ce3d8a8d8bb 522 Gene3D G3DSA:3.30.420.150 139 316 6.3E-79 T 13-10-2018 ambt_15880 27f75041a021ab99df8e6ce3d8a8d8bb 522 SUPERFAMILY SSF109604 334 521 4.29E-42 T 13-10-2018 ambt_15880 27f75041a021ab99df8e6ce3d8a8d8bb 522 SUPERFAMILY SSF53067 34 153 1.57E-34 T 13-10-2018 ambt_15880 27f75041a021ab99df8e6ce3d8a8d8bb 522 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 29 522 53.694 T 13-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 ambt_15880 27f75041a021ab99df8e6ce3d8a8d8bb 522 Gene3D G3DSA:1.10.3210.10 331 522 1.0E-49 T 13-10-2018 ambt_15880 27f75041a021ab99df8e6ce3d8a8d8bb 522 PIRSF PIRSF001267 25 522 5.8E-170 T 13-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 ambt_15880 27f75041a021ab99df8e6ce3d8a8d8bb 522 Pfam PF02541 Ppx/GppA phosphatase family 48 329 2.1E-77 T 13-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 ambt_19475 0c24c2c931c01640d8600de2c97814ae 40 Pfam PF12404 Peptidase 5 38 9.1E-9 T 13-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 ambt_01850 f97f91542d3dac354e6698610afbcbe3 376 Gene3D G3DSA:3.20.20.10 19 244 3.6E-153 T 13-10-2018 IPR029066 PLP-binding barrel ambt_01850 f97f91542d3dac354e6698610afbcbe3 376 SUPERFAMILY SSF51419 19 247 3.27E-43 T 13-10-2018 IPR029066 PLP-binding barrel ambt_01850 f97f91542d3dac354e6698610afbcbe3 376 SUPERFAMILY SSF50621 212 365 6.28E-31 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ambt_01850 f97f91542d3dac354e6698610afbcbe3 376 Gene3D G3DSA:2.40.37.10 10 371 3.6E-153 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ambt_01850 f97f91542d3dac354e6698610afbcbe3 376 PIRSF PIRSF038941 2 376 1.3E-161 T 13-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 ambt_01850 f97f91542d3dac354e6698610afbcbe3 376 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 245 332 9.7E-9 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ambt_01850 f97f91542d3dac354e6698610afbcbe3 376 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 10 374 8.9E-159 T 13-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 ambt_09255 40bb69a7b7a7bdc40cf37adad44ed136 406 Gene3D G3DSA:3.40.640.10 53 294 8.6E-139 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_09255 40bb69a7b7a7bdc40cf37adad44ed136 406 Pfam PF00155 Aminotransferase class I and II 36 381 4.7E-55 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ambt_09255 40bb69a7b7a7bdc40cf37adad44ed136 406 Gene3D G3DSA:3.90.1150.10 22 398 8.6E-139 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_09255 40bb69a7b7a7bdc40cf37adad44ed136 406 SUPERFAMILY SSF53383 7 401 2.13E-91 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_12695 c6b6a0b55957cf7adc8549a1cbae8558 402 Pfam PF12704 MacB-like periplasmic core domain 25 246 1.8E-12 T 13-10-2018 IPR025857 MacB-like periplasmic core domain ambt_12695 c6b6a0b55957cf7adc8549a1cbae8558 402 Pfam PF02687 FtsX-like permease family 309 394 9.2E-11 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ambt_02260 ef61ae38cea0f2ffb96bd4d406a32d23 75 Pfam PF03884 DNA gyrase inhibitor YacG 3 52 1.5E-24 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 ambt_02260 ef61ae38cea0f2ffb96bd4d406a32d23 75 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 56 16.122 T 13-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 ambt_02260 ef61ae38cea0f2ffb96bd4d406a32d23 75 SUPERFAMILY SSF57716 2 52 7.13E-20 T 13-10-2018 ambt_02260 ef61ae38cea0f2ffb96bd4d406a32d23 75 Gene3D G3DSA:3.30.50.10 1 61 5.5E-23 T 13-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 Gene3D G3DSA:1.10.3210.10 441 571 1.6E-8 T 13-10-2018 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 SUPERFAMILY SSF81301 38 167 5.03E-16 T 13-10-2018 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 883 263.488 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 Pfam PF08335 GlnD PII-uridylyltransferase 178 316 5.1E-33 T 13-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 SUPERFAMILY SSF81593 195 313 5.81E-5 T 13-10-2018 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 Gene3D G3DSA:3.30.460.10 62 167 4.6E-6 T 13-10-2018 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 SMART SM00471 448 594 2.6E-6 T 13-10-2018 IPR003607 HD/PDEase domain ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 Pfam PF01966 HD domain 472 558 1.1E-9 T 13-10-2018 IPR006674 HD domain ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 Pfam PF01909 Nucleotidyltransferase domain 72 131 5.0E-6 T 13-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 PIRSF PIRSF006288 10 880 4.0E-281 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 SUPERFAMILY SSF55021 696 766 2.04E-8 T 13-10-2018 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 SUPERFAMILY SSF55021 802 860 2.12E-6 T 13-10-2018 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 39 872 5.5E-265 T 13-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ambt_13715 0bd6bb3724acb978163455753e5cbb98 883 SUPERFAMILY SSF109604 417 541 1.1E-14 T 13-10-2018 ambt_08180 e7be0aab22ab82b3507af9cefab586b8 367 Gene3D G3DSA:1.10.443.10 140 353 2.2E-35 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_08180 e7be0aab22ab82b3507af9cefab586b8 367 Pfam PF00589 Phage integrase family 160 351 2.8E-14 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_08180 e7be0aab22ab82b3507af9cefab586b8 367 Gene3D G3DSA:1.10.150.130 29 127 6.3E-13 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_08180 e7be0aab22ab82b3507af9cefab586b8 367 SUPERFAMILY SSF47823 40 115 9.22E-12 T 13-10-2018 ambt_08180 e7be0aab22ab82b3507af9cefab586b8 367 SUPERFAMILY SSF56349 140 359 7.95E-32 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_14945 6bada680cf255f847a9bc4f955f06610 189 Gene3D G3DSA:1.10.260.40 9 87 6.6E-17 T 13-10-2018 ambt_14945 6bada680cf255f847a9bc4f955f06610 189 SUPERFAMILY SSF51182 61 187 3.92E-17 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_14945 6bada680cf255f847a9bc4f955f06610 189 SMART SM00530 21 76 9.0E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_14945 6bada680cf255f847a9bc4f955f06610 189 Pfam PF01381 Helix-turn-helix 22 73 5.2E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_14945 6bada680cf255f847a9bc4f955f06610 189 SUPERFAMILY SSF47413 17 78 4.83E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_14945 6bada680cf255f847a9bc4f955f06610 189 Gene3D G3DSA:2.60.120.10 96 188 2.3E-24 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_10535 3d9c3cd533ad5bd84473000fdd17bcb4 847 SUPERFAMILY SSF51126 300 730 2.25E-14 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor ambt_10535 3d9c3cd533ad5bd84473000fdd17bcb4 847 SMART SM00710 344 389 850.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_10535 3d9c3cd533ad5bd84473000fdd17bcb4 847 SMART SM00710 492 513 4400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_10535 3d9c3cd533ad5bd84473000fdd17bcb4 847 SMART SM00710 550 571 1200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_10535 3d9c3cd533ad5bd84473000fdd17bcb4 847 SMART SM00710 321 343 480.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_07985 574715441fd4f8d3cc9e24a7c86d2298 631 SUPERFAMILY SSF56112 44 312 2.46E-30 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_07985 574715441fd4f8d3cc9e24a7c86d2298 631 SMART SM00220 45 330 3.8E-7 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ambt_07985 574715441fd4f8d3cc9e24a7c86d2298 631 Gene3D G3DSA:1.10.510.10 97 334 1.4E-21 T 13-10-2018 ambt_07985 574715441fd4f8d3cc9e24a7c86d2298 631 Pfam PF00069 Protein kinase domain 86 280 8.4E-12 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ambt_01675 65b35cfdd5742361e50d7947bd00782f 74 Gene3D G3DSA:1.10.260.40 6 71 3.3E-27 T 13-10-2018 ambt_01675 65b35cfdd5742361e50d7947bd00782f 74 SUPERFAMILY SSF47413 7 69 5.07E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_01675 65b35cfdd5742361e50d7947bd00782f 74 Pfam PF01381 Helix-turn-helix 21 65 3.3E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_01675 65b35cfdd5742361e50d7947bd00782f 74 SMART SM00530 10 66 1.3E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_07975 71eb73b06e927015793d2b9c7a76af91 469 Gene3D G3DSA:2.40.50.100 2 101 2.5E-23 T 13-10-2018 ambt_07975 71eb73b06e927015793d2b9c7a76af91 469 Gene3D G3DSA:3.30.559.10 220 466 3.2E-83 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ambt_07975 71eb73b06e927015793d2b9c7a76af91 469 Gene3D G3DSA:4.10.320.10 145 191 3.9E-16 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ambt_07975 71eb73b06e927015793d2b9c7a76af91 469 Pfam PF00364 Biotin-requiring enzyme 5 76 1.7E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment ambt_07975 71eb73b06e927015793d2b9c7a76af91 469 SUPERFAMILY SSF52777 234 466 3.6E-76 T 13-10-2018 ambt_07975 71eb73b06e927015793d2b9c7a76af91 469 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 239 466 4.5E-81 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ambt_07975 71eb73b06e927015793d2b9c7a76af91 469 Pfam PF02817 e3 binding domain 150 184 8.0E-15 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ambt_07975 71eb73b06e927015793d2b9c7a76af91 469 SUPERFAMILY SSF47005 148 187 6.8E-11 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ambt_07975 71eb73b06e927015793d2b9c7a76af91 469 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ambt_07975 71eb73b06e927015793d2b9c7a76af91 469 SUPERFAMILY SSF51230 2 92 8.77E-26 T 13-10-2018 IPR011053 Single hybrid motif ambt_21385 2e38dbe5176c4332ed29f7e660ec5f73 521 Gene3D G3DSA:3.30.450.90 114 246 7.5E-54 T 13-10-2018 ambt_21385 2e38dbe5176c4332ed29f7e660ec5f73 521 Gene3D G3DSA:3.30.300.160 26 113 1.5E-17 T 13-10-2018 ambt_21385 2e38dbe5176c4332ed29f7e660ec5f73 521 Pfam PF00437 Type II/IV secretion system protein 148 413 1.4E-93 T 13-10-2018 IPR001482 Type II/IV secretion system protein ambt_21385 2e38dbe5176c4332ed29f7e660ec5f73 521 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 36 518 3.0E-220 T 13-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 ambt_21385 2e38dbe5176c4332ed29f7e660ec5f73 521 Gene3D G3DSA:3.40.50.300 247 521 5.2E-122 T 13-10-2018 ambt_21385 2e38dbe5176c4332ed29f7e660ec5f73 521 SUPERFAMILY SSF52540 130 518 1.86E-105 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_21385 2e38dbe5176c4332ed29f7e660ec5f73 521 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 341 355 - T 13-10-2018 IPR001482 Type II/IV secretion system protein ambt_21385 2e38dbe5176c4332ed29f7e660ec5f73 521 SUPERFAMILY SSF160246 36 100 9.94E-14 T 13-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily ambt_21385 2e38dbe5176c4332ed29f7e660ec5f73 521 SMART SM00382 274 397 0.0032 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_15355 0b94b66cdeb196b2f19c20e0a573e51e 259 Pfam PF00849 RNA pseudouridylate synthase 24 194 1.5E-27 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_15355 0b94b66cdeb196b2f19c20e0a573e51e 259 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 62 76 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_15355 0b94b66cdeb196b2f19c20e0a573e51e 259 Gene3D G3DSA:3.30.2350.10 6 245 1.8E-67 T 13-10-2018 ambt_15355 0b94b66cdeb196b2f19c20e0a573e51e 259 SUPERFAMILY SSF55120 16 249 1.15E-60 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_14765 88a59f41f50becbfbf6382a8982dc9c3 573 Pfam PF02272 DHHA1 domain 319 448 1.1E-24 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ambt_14765 88a59f41f50becbfbf6382a8982dc9c3 573 Gene3D G3DSA:3.90.1640.30 45 323 2.6E-86 T 13-10-2018 ambt_14765 88a59f41f50becbfbf6382a8982dc9c3 573 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 569 3.5E-156 T 13-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 ambt_14765 88a59f41f50becbfbf6382a8982dc9c3 573 SUPERFAMILY SSF64182 46 457 7.33E-114 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily ambt_14765 88a59f41f50becbfbf6382a8982dc9c3 573 Pfam PF01368 DHH family 72 199 4.9E-8 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ambt_14765 88a59f41f50becbfbf6382a8982dc9c3 573 Gene3D G3DSA:3.10.310.30 325 455 4.8E-30 T 13-10-2018 ambt_10860 cafcceddba261657db31a4c43c841580 438 SUPERFAMILY SSF51338 26 83 8.24E-14 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_10860 cafcceddba261657db31a4c43c841580 438 Gene3D G3DSA:2.30.40.10 5 422 3.7E-161 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_10860 cafcceddba261657db31a4c43c841580 438 Gene3D G3DSA:3.20.20.140 69 386 3.7E-161 T 13-10-2018 ambt_10860 cafcceddba261657db31a4c43c841580 438 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 26 424 8.4E-160 T 13-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 ambt_10860 cafcceddba261657db31a4c43c841580 438 Pfam PF01979 Amidohydrolase family 66 425 3.1E-54 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ambt_10860 cafcceddba261657db31a4c43c841580 438 SUPERFAMILY SSF51556 68 371 4.81E-90 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_16600 6845e2dcc559f9c81e43a391f9f0af18 274 Gene3D G3DSA:2.60.120.560 46 274 6.1E-82 T 13-10-2018 ambt_16600 6845e2dcc559f9c81e43a391f9f0af18 274 Pfam PF06439 Domain of Unknown Function (DUF1080) 87 272 5.7E-36 T 13-10-2018 IPR010496 Domain of unknown function DUF1080 ambt_01995 4ab3a4bf7aefe63444721ac5735dff2c 45 Gene3D G3DSA:2.40.50.140 1 45 4.0E-7 T 13-10-2018 ambt_01995 4ab3a4bf7aefe63444721ac5735dff2c 45 SUPERFAMILY SSF50249 2 44 2.26E-7 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_11395 e46be48b00b51476f4a3f54dbd2ad148 414 Pfam PF01494 FAD binding domain 3 330 4.4E-27 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 ambt_11395 e46be48b00b51476f4a3f54dbd2ad148 414 Gene3D G3DSA:3.30.9.50 78 287 3.0E-96 T 13-10-2018 ambt_11395 e46be48b00b51476f4a3f54dbd2ad148 414 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 408 5.3E-105 T 13-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 ambt_11395 e46be48b00b51476f4a3f54dbd2ad148 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 313 329 9.5E-18 T 13-10-2018 ambt_11395 e46be48b00b51476f4a3f54dbd2ad148 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 9.5E-18 T 13-10-2018 ambt_11395 e46be48b00b51476f4a3f54dbd2ad148 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 171 186 9.5E-18 T 13-10-2018 ambt_11395 e46be48b00b51476f4a3f54dbd2ad148 414 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 313 9.5E-18 T 13-10-2018 ambt_11395 e46be48b00b51476f4a3f54dbd2ad148 414 Gene3D G3DSA:3.50.50.60 3 354 3.0E-96 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_11395 e46be48b00b51476f4a3f54dbd2ad148 414 SUPERFAMILY SSF51905 2 401 4.67E-50 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 SUPERFAMILY SSF51735 160 313 4.09E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 402 2.1E-132 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 SUPERFAMILY SSF69742 1 156 1.06E-46 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 SUPERFAMILY SSF69075 315 415 3.92E-21 T 13-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 Gene3D G3DSA:3.40.50.720 159 311 5.0E-43 T 13-10-2018 ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 PIRSF PIRSF000445 1 424 1.4E-147 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 Gene3D G3DSA:3.30.460.30 1 156 2.6E-55 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 29.738 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 169 304 3.6E-45 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 401 1.5E-17 T 13-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 13-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ambt_11165 55a4a85e8d96a2567ae5848a5f2a0908 424 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 4.9E-48 T 13-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ambt_00630 659713cb7cb20bb49ff7b5891a2650fb 181 Gene3D G3DSA:3.30.1060.10 1 168 1.6E-71 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ambt_00630 659713cb7cb20bb49ff7b5891a2650fb 181 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 163 37.426 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ambt_00630 659713cb7cb20bb49ff7b5891a2650fb 181 Pfam PF01625 Peptide methionine sulfoxide reductase 7 159 1.2E-65 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ambt_00630 659713cb7cb20bb49ff7b5891a2650fb 181 SUPERFAMILY SSF55068 2 169 1.22E-73 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ambt_00630 659713cb7cb20bb49ff7b5891a2650fb 181 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 158 7.1E-62 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ambt_15320 6c4ca9735e97091aa3a4a34ef4fe5eac 278 Gene3D G3DSA:1.10.287.70 122 233 4.1E-33 T 13-10-2018 ambt_15320 6c4ca9735e97091aa3a4a34ef4fe5eac 278 Gene3D G3DSA:1.20.120.350 7 121 2.5E-25 T 13-10-2018 IPR027359 Voltage-dependent channel domain superfamily ambt_15320 6c4ca9735e97091aa3a4a34ef4fe5eac 278 SUPERFAMILY SSF81324 17 232 2.2E-30 T 13-10-2018 ambt_15320 6c4ca9735e97091aa3a4a34ef4fe5eac 278 Pfam PF00520 Ion transport protein 16 234 5.1E-42 T 13-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 Gene3D G3DSA:1.25.40.80 145 312 1.2E-46 T 13-10-2018 ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 SUPERFAMILY SSF48173 216 436 2.88E-71 T 13-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 16 436 1.7E-146 T 13-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 Gene3D G3DSA:1.10.579.10 314 437 9.8E-53 T 13-10-2018 ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 Gene3D G3DSA:3.40.50.620 17 141 1.3E-21 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 PRINTS PR00147 DNA photolyase signature 339 355 2.8E-14 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 PRINTS PR00147 DNA photolyase signature 398 412 2.8E-14 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 PRINTS PR00147 DNA photolyase signature 359 377 2.8E-14 T 13-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 SUPERFAMILY SSF52425 15 189 2.88E-34 T 13-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 339 351 - T 13-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 Pfam PF00875 DNA photolyase 18 179 1.2E-23 T 13-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 ambt_08115 c9861c717c77e0f2f9c7931a9e2f1022 437 Pfam PF03441 FAD binding domain of DNA photolyase 292 436 3.5E-44 T 13-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 ambt_12210 284c4d3f4901fe6c188bdc37565b96e6 363 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 10 347 6.3E-151 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ambt_12210 284c4d3f4901fe6c188bdc37565b96e6 363 Gene3D G3DSA:3.20.20.70 3 350 4.8E-149 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_12210 284c4d3f4901fe6c188bdc37565b96e6 363 SUPERFAMILY SSF51569 9 346 1.1E-133 T 13-10-2018 ambt_12210 284c4d3f4901fe6c188bdc37565b96e6 363 PIRSF PIRSF001361 1 354 1.0E-153 T 13-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ambt_12210 284c4d3f4901fe6c188bdc37565b96e6 363 Pfam PF00793 DAHP synthetase I family 41 340 7.2E-98 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ambt_15570 3204a702433cef8595b391a53ae399af 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ambt_15570 3204a702433cef8595b391a53ae399af 387 SUPERFAMILY SSF53901 1 258 2.44E-74 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_15570 3204a702433cef8595b391a53ae399af 387 PIRSF PIRSF000429 1 387 3.0E-127 T 13-10-2018 IPR002155 Thiolase GO:0016747 ambt_15570 3204a702433cef8595b391a53ae399af 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.4E-135 T 13-10-2018 IPR002155 Thiolase GO:0016747 ambt_15570 3204a702433cef8595b391a53ae399af 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 62.026 T 13-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 ambt_15570 3204a702433cef8595b391a53ae399af 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 3.4E-208 T 13-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 ambt_15570 3204a702433cef8595b391a53ae399af 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 ambt_15570 3204a702433cef8595b391a53ae399af 387 SUPERFAMILY SSF53901 262 386 6.07E-42 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_15570 3204a702433cef8595b391a53ae399af 387 Gene3D G3DSA:3.40.47.10 4 267 5.2E-146 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_15570 3204a702433cef8595b391a53ae399af 387 Pfam PF00108 Thiolase, N-terminal domain 4 253 2.1E-77 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ambt_15570 3204a702433cef8595b391a53ae399af 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ambt_15570 3204a702433cef8595b391a53ae399af 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 1.6E-47 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ambt_15570 3204a702433cef8595b391a53ae399af 387 Gene3D G3DSA:3.40.47.10 134 381 5.2E-146 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 ambt_05185 091f9be3a656e918ac9f85e8974b655d 241 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 4 231 1.3E-94 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 ambt_05185 091f9be3a656e918ac9f85e8974b655d 241 Gene3D G3DSA:3.60.21.10 4 235 4.7E-14 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like ambt_05185 091f9be3a656e918ac9f85e8974b655d 241 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 241 116.953 T 13-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 ambt_05185 091f9be3a656e918ac9f85e8974b655d 241 SUPERFAMILY SSF56300 5 220 3.14E-28 T 13-10-2018 ambt_05185 091f9be3a656e918ac9f85e8974b655d 241 Pfam PF00149 Calcineurin-like phosphoesterase 5 199 1.2E-8 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ambt_12400 913099aeda2fbb03e39abe5497ab44ef 170 SUPERFAMILY SSF88659 96 159 1.31E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_12400 913099aeda2fbb03e39abe5497ab44ef 170 Pfam PF08281 Sigma-70, region 4 102 154 2.8E-12 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_12400 913099aeda2fbb03e39abe5497ab44ef 170 Gene3D G3DSA:1.10.1740.10 1 73 8.2E-18 T 13-10-2018 ambt_12400 913099aeda2fbb03e39abe5497ab44ef 170 SUPERFAMILY SSF88946 6 96 5.89E-20 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_12400 913099aeda2fbb03e39abe5497ab44ef 170 Gene3D G3DSA:1.10.10.10 98 164 1.1E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_12400 913099aeda2fbb03e39abe5497ab44ef 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 158 5.6E-23 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_12400 913099aeda2fbb03e39abe5497ab44ef 170 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 33 64 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_12400 913099aeda2fbb03e39abe5497ab44ef 170 Pfam PF04542 Sigma-70 region 2 11 77 2.3E-15 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 SUPERFAMILY SSF82866 794 1020 1.7E-48 T 13-10-2018 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 Gene3D G3DSA:1.20.1640.10 17 502 1.3E-256 T 13-10-2018 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 Gene3D G3DSA:3.30.70.1430 47 805 1.3E-256 T 13-10-2018 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 SUPERFAMILY SSF82714 721 794 1.44E-9 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 Gene3D G3DSA:1.20.1640.10 503 1015 1.3E-256 T 13-10-2018 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 Gene3D G3DSA:3.30.70.1440 659 858 1.3E-256 T 13-10-2018 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 Gene3D G3DSA:3.30.70.1320 140 328 1.3E-256 T 13-10-2018 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 Gene3D G3DSA:3.30.2090.10 710 797 1.3E-256 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 Pfam PF00873 AcrB/AcrD/AcrF family 11 1017 7.9E-157 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 SUPERFAMILY SSF82866 294 488 5.89E-38 T 13-10-2018 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 Gene3D G3DSA:3.30.70.1430 560 658 1.3E-256 T 13-10-2018 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 PRINTS PR00702 Acriflavin resistance protein family signature 45 63 1.9E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 1.9E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.9E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 1.9E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 PRINTS PR00702 Acriflavin resistance protein family signature 17 41 1.9E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.9E-27 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 Gene3D G3DSA:3.30.2090.10 181 271 1.3E-256 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 SUPERFAMILY SSF82693 155 326 4.19E-11 T 13-10-2018 ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 SUPERFAMILY SSF82714 186 267 7.19E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_11910 cf63ba1ee0c9bb1a2a861096c923c417 1051 SUPERFAMILY SSF82693 47 138 3.3E-15 T 13-10-2018 ambt_14420 e0de460d3e85ce7484d19a9760fe42fa 176 Pfam PF00929 Exonuclease 13 157 3.1E-4 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_14420 e0de460d3e85ce7484d19a9760fe42fa 176 Gene3D G3DSA:3.30.420.10 12 173 6.5E-13 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_14420 e0de460d3e85ce7484d19a9760fe42fa 176 SUPERFAMILY SSF53098 13 162 4.81E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_17495 1eae1c83daf35e4cc0e8ac4c25c74acf 240 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 203 5.1E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_17495 1eae1c83daf35e4cc0e8ac4c25c74acf 240 Gene3D G3DSA:3.40.50.1000 11 233 3.5E-52 T 13-10-2018 IPR023214 HAD superfamily ambt_17495 1eae1c83daf35e4cc0e8ac4c25c74acf 240 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 208 5.0E-13 T 13-10-2018 ambt_17495 1eae1c83daf35e4cc0e8ac4c25c74acf 240 SUPERFAMILY SSF56784 10 239 2.44E-34 T 13-10-2018 IPR036412 HAD-like superfamily ambt_17495 1eae1c83daf35e4cc0e8ac4c25c74acf 240 Gene3D G3DSA:1.20.120.1600 24 112 3.5E-52 T 13-10-2018 ambt_02180 d6cdb1fd49e2e49b1d5d049c39ca1760 530 SUPERFAMILY SSF53244 373 525 6.54E-50 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_02180 d6cdb1fd49e2e49b1d5d049c39ca1760 530 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 524 1.5E-146 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ambt_02180 d6cdb1fd49e2e49b1d5d049c39ca1760 530 Gene3D G3DSA:3.40.1390.10 8 107 4.2E-26 T 13-10-2018 ambt_02180 d6cdb1fd49e2e49b1d5d049c39ca1760 530 Pfam PF02875 Mur ligase family, glutamate ligase domain 373 458 5.3E-23 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ambt_02180 d6cdb1fd49e2e49b1d5d049c39ca1760 530 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 8 525 32.048 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ambt_02180 d6cdb1fd49e2e49b1d5d049c39ca1760 530 Gene3D G3DSA:3.40.1190.10 109 376 7.7E-67 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_02180 d6cdb1fd49e2e49b1d5d049c39ca1760 530 Pfam PF08245 Mur ligase middle domain 118 352 6.1E-43 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ambt_02180 d6cdb1fd49e2e49b1d5d049c39ca1760 530 SUPERFAMILY SSF63418 13 107 9.81E-20 T 13-10-2018 IPR035911 MurE/MurF, N-terminal ambt_02180 d6cdb1fd49e2e49b1d5d049c39ca1760 530 Gene3D G3DSA:3.90.190.20 383 530 8.6E-56 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_02180 d6cdb1fd49e2e49b1d5d049c39ca1760 530 Pfam PF01225 Mur ligase family, catalytic domain 26 106 6.3E-13 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ambt_02180 d6cdb1fd49e2e49b1d5d049c39ca1760 530 SUPERFAMILY SSF53623 109 372 6.98E-61 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_13845 fed14053a15e205049f5da2a3082a8c5 351 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 10 350 6.0E-108 T 13-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 ambt_13845 fed14053a15e205049f5da2a3082a8c5 351 Pfam PF00953 Glycosyl transferase family 4 75 233 1.3E-30 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ambt_13845 fed14053a15e205049f5da2a3082a8c5 351 ProSitePatterns PS01348 MraY family signature 2. 150 161 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_13845 fed14053a15e205049f5da2a3082a8c5 351 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 351 24.994 T 13-10-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819|MetaCyc: PWY-7905 ambt_02445 a9b4cc60dfeb3c93ad9b3d788772ec66 434 SUPERFAMILY SSF55920 195 422 2.62E-55 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like ambt_02445 a9b4cc60dfeb3c93ad9b3d788772ec66 434 Gene3D G3DSA:3.40.350.10 28 194 2.4E-46 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ambt_02445 a9b4cc60dfeb3c93ad9b3d788772ec66 434 Pfam PF00557 Metallopeptidase family M24 204 409 3.6E-45 T 13-10-2018 IPR000994 Peptidase M24 ambt_02445 a9b4cc60dfeb3c93ad9b3d788772ec66 434 Gene3D G3DSA:3.90.230.10 195 426 6.6E-59 T 13-10-2018 ambt_02445 a9b4cc60dfeb3c93ad9b3d788772ec66 434 SUPERFAMILY SSF53092 46 194 1.74E-25 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ambt_02445 a9b4cc60dfeb3c93ad9b3d788772ec66 434 Pfam PF01321 Creatinase/Prolidase N-terminal domain 62 195 2.2E-19 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 ambt_22160 1243c5fb67671c053e3079a110f77de9 513 SUPERFAMILY SSF50615 10 94 2.55E-25 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_22160 1243c5fb67671c053e3079a110f77de9 513 Gene3D G3DSA:1.20.150.20 383 513 1.5E-46 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22160 1243c5fb67671c053e3079a110f77de9 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_22160 1243c5fb67671c053e3079a110f77de9 513 SUPERFAMILY SSF52540 96 381 1.24E-93 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_22160 1243c5fb67671c053e3079a110f77de9 513 SUPERFAMILY SSF47917 383 511 9.94E-46 T 13-10-2018 ambt_22160 1243c5fb67671c053e3079a110f77de9 513 Gene3D G3DSA:2.40.30.20 1 93 5.3E-29 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_22160 1243c5fb67671c053e3079a110f77de9 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 8.6E-13 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_22160 1243c5fb67671c053e3079a110f77de9 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 8.3E-73 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_22160 1243c5fb67671c053e3079a110f77de9 513 Gene3D G3DSA:3.40.50.300 94 382 2.3E-130 T 13-10-2018 ambt_22160 1243c5fb67671c053e3079a110f77de9 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 2.8E-252 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22160 1243c5fb67671c053e3079a110f77de9 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.949 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22160 1243c5fb67671c053e3079a110f77de9 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.3E-44 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_01885 47de1450a31624fc8c7261c407fda40b 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 2.1E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_01885 47de1450a31624fc8c7261c407fda40b 227 SMART SM00448 1 112 5.3E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01885 47de1450a31624fc8c7261c407fda40b 227 SMART SM00862 146 221 8.5E-29 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_01885 47de1450a31624fc8c7261c407fda40b 227 Gene3D G3DSA:1.10.10.10 124 226 5.0E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_01885 47de1450a31624fc8c7261c407fda40b 227 SUPERFAMILY SSF52172 1 181 5.14E-35 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01885 47de1450a31624fc8c7261c407fda40b 227 Pfam PF00072 Response regulator receiver domain 3 113 5.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01885 47de1450a31624fc8c7261c407fda40b 227 Gene3D G3DSA:3.40.50.2300 1 120 2.8E-32 T 13-10-2018 ambt_08550 4683a0b563c48d3d4b6af3ea95732c59 90 SUPERFAMILY SSF54292 17 88 5.11E-19 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ambt_08550 4683a0b563c48d3d4b6af3ea95732c59 90 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 21 79 1.2E-11 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ambt_08550 4683a0b563c48d3d4b6af3ea95732c59 90 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ambt_08550 4683a0b563c48d3d4b6af3ea95732c59 90 Gene3D G3DSA:3.10.20.30 1 89 2.6E-17 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_05555 2bdba6c766f32e91aab44c7dd9d74b65 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 445 2.3E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_05555 2bdba6c766f32e91aab44c7dd9d74b65 447 SUPERFAMILY SSF55874 286 445 3.51E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_05555 2bdba6c766f32e91aab44c7dd9d74b65 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 1.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05555 2bdba6c766f32e91aab44c7dd9d74b65 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 1.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05555 2bdba6c766f32e91aab44c7dd9d74b65 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.2E-10 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_05555 2bdba6c766f32e91aab44c7dd9d74b65 447 Gene3D G3DSA:1.10.287.130 182 297 1.8E-21 T 13-10-2018 ambt_05555 2bdba6c766f32e91aab44c7dd9d74b65 447 Gene3D G3DSA:3.30.565.10 299 445 2.7E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_05555 2bdba6c766f32e91aab44c7dd9d74b65 447 SMART SM00388 234 296 8.1E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_05555 2bdba6c766f32e91aab44c7dd9d74b65 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 296 1.8E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_05555 2bdba6c766f32e91aab44c7dd9d74b65 447 SMART SM00387 337 447 3.7E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_05555 2bdba6c766f32e91aab44c7dd9d74b65 447 SUPERFAMILY SSF47384 219 297 7.06E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_08965 24c9f21f5443c0aac3e379a73b6153ac 584 Gene3D G3DSA:3.20.20.80 63 468 2.9E-157 T 13-10-2018 ambt_08965 24c9f21f5443c0aac3e379a73b6153ac 584 Gene3D G3DSA:2.60.40.1180 504 579 1.5E-11 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta ambt_08965 24c9f21f5443c0aac3e379a73b6153ac 584 Pfam PF00128 Alpha amylase, catalytic domain 94 348 7.0E-18 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_08965 24c9f21f5443c0aac3e379a73b6153ac 584 SUPERFAMILY SSF51445 56 542 6.38E-96 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_08965 24c9f21f5443c0aac3e379a73b6153ac 584 Gene3D G3DSA:3.90.400.10 145 218 2.9E-157 T 13-10-2018 ambt_08965 24c9f21f5443c0aac3e379a73b6153ac 584 SMART SM00642 78 491 2.1E-7 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_08965 24c9f21f5443c0aac3e379a73b6153ac 584 PIRSF PIRSF003059 7 580 4.7E-176 T 13-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related ambt_07050 f16d3a22a8528d9d666f15c60621887f 902 Gene3D G3DSA:2.40.170.20 36 236 3.0E-42 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_07050 f16d3a22a8528d9d666f15c60621887f 902 Gene3D G3DSA:2.40.170.20 806 902 1.6E-7 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_07050 f16d3a22a8528d9d666f15c60621887f 902 SUPERFAMILY SSF56935 31 901 9.89E-99 T 13-10-2018 ambt_07050 f16d3a22a8528d9d666f15c60621887f 902 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 38 - T 13-10-2018 IPR010916 TonB box, conserved site ambt_07050 f16d3a22a8528d9d666f15c60621887f 902 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 158 2.0E-12 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_07050 f16d3a22a8528d9d666f15c60621887f 902 Pfam PF00593 TonB dependent receptor 335 899 2.7E-34 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_19060 b9f6a6a61078a74fc3f51e18c4217083 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.169 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19060 b9f6a6a61078a74fc3f51e18c4217083 118 SUPERFAMILY SSF46946 2 114 1.47E-41 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ambt_19060 b9f6a6a61078a74fc3f51e18c4217083 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.0E-30 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19060 b9f6a6a61078a74fc3f51e18c4217083 118 Gene3D G3DSA:4.10.910.10 72 118 3.7E-25 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19060 b9f6a6a61078a74fc3f51e18c4217083 118 PIRSF PIRSF002134 1 118 3.4E-38 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19060 b9f6a6a61078a74fc3f51e18c4217083 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.2E-50 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19060 b9f6a6a61078a74fc3f51e18c4217083 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19060 b9f6a6a61078a74fc3f51e18c4217083 118 Gene3D G3DSA:1.10.8.50 1 71 8.6E-25 T 13-10-2018 ambt_06790 0460a39fa2c5d5a15fc6b094ce2fd0a1 167 Gene3D G3DSA:2.60.120.10 43 161 8.3E-19 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_06790 0460a39fa2c5d5a15fc6b094ce2fd0a1 167 SUPERFAMILY SSF51182 55 153 1.78E-21 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_06790 0460a39fa2c5d5a15fc6b094ce2fd0a1 167 Pfam PF07883 Cupin domain 82 149 7.6E-16 T 13-10-2018 IPR013096 Cupin 2, conserved barrel ambt_05460 6031f1ec020563e412b9a8f32b2b9804 149 Gene3D G3DSA:2.40.50.140 82 149 8.6E-6 T 13-10-2018 ambt_05460 6031f1ec020563e412b9a8f32b2b9804 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 148 1.2E-14 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain ambt_03850 d2de1af6222108103920c7bed8c23808 255 PIRSF PIRSF004808 1 240 4.7E-76 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 ambt_03850 d2de1af6222108103920c7bed8c23808 255 Gene3D G3DSA:1.10.8.590 165 244 2.6E-28 T 13-10-2018 ambt_03850 d2de1af6222108103920c7bed8c23808 255 Pfam PF00588 SpoU rRNA Methylase family 5 154 3.7E-32 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ambt_03850 d2de1af6222108103920c7bed8c23808 255 SUPERFAMILY SSF75217 4 184 3.4E-36 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases ambt_03850 d2de1af6222108103920c7bed8c23808 255 Gene3D G3DSA:3.40.1280.10 1 164 6.5E-64 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ambt_03850 d2de1af6222108103920c7bed8c23808 255 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 236 1.5E-85 T 13-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 ambt_11000 39defe84f4d988c2ebee8514b1374dde 436 Gene3D G3DSA:2.60.120.10 274 402 1.4E-62 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_11000 39defe84f4d988c2ebee8514b1374dde 436 SUPERFAMILY SSF51182 6 434 8.56E-158 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_11000 39defe84f4d988c2ebee8514b1374dde 436 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 7 432 9.9E-196 T 13-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 ambt_11000 39defe84f4d988c2ebee8514b1374dde 436 Pfam PF04209 homogentisate 1,2-dioxygenase 8 432 9.7E-197 T 13-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 ambt_14335 0a9c2941960142247f164091b9bd1fe8 302 Gene3D G3DSA:3.40.190.10 94 292 1.1E-47 T 13-10-2018 ambt_14335 0a9c2941960142247f164091b9bd1fe8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 6.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_14335 0a9c2941960142247f164091b9bd1fe8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 6.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_14335 0a9c2941960142247f164091b9bd1fe8 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 6.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_14335 0a9c2941960142247f164091b9bd1fe8 302 Gene3D G3DSA:3.40.190.10 164 263 1.1E-47 T 13-10-2018 ambt_14335 0a9c2941960142247f164091b9bd1fe8 302 SUPERFAMILY SSF46785 5 89 9.99E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_14335 0a9c2941960142247f164091b9bd1fe8 302 Gene3D G3DSA:1.10.10.10 2 88 7.1E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_14335 0a9c2941960142247f164091b9bd1fe8 302 SUPERFAMILY SSF53850 93 293 5.72E-29 T 13-10-2018 ambt_14335 0a9c2941960142247f164091b9bd1fe8 302 Pfam PF03466 LysR substrate binding domain 93 289 5.8E-29 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_14335 0a9c2941960142247f164091b9bd1fe8 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 8.9E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_22005 ce938e211d56ed18e120a90e6d27179f 796 Gene3D G3DSA:3.40.50.300 137 338 1.5E-88 T 13-10-2018 ambt_22005 ce938e211d56ed18e120a90e6d27179f 796 Pfam PF08463 EcoEI R protein C-terminal 637 793 3.3E-23 T 13-10-2018 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 ambt_22005 ce938e211d56ed18e120a90e6d27179f 796 SMART SM00487 154 356 2.6E-16 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_22005 ce938e211d56ed18e120a90e6d27179f 796 Gene3D G3DSA:3.90.1570.30 1 136 5.5E-60 T 13-10-2018 ambt_22005 ce938e211d56ed18e120a90e6d27179f 796 Pfam PF00271 Helicase conserved C-terminal domain 406 522 3.3E-6 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_22005 ce938e211d56ed18e120a90e6d27179f 796 Pfam PF04851 Type III restriction enzyme, res subunit 156 321 1.2E-35 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ambt_22005 ce938e211d56ed18e120a90e6d27179f 796 Gene3D G3DSA:3.40.50.300 339 568 4.1E-65 T 13-10-2018 ambt_22005 ce938e211d56ed18e120a90e6d27179f 796 SUPERFAMILY SSF52540 277 525 1.02E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_22005 ce938e211d56ed18e120a90e6d27179f 796 SUPERFAMILY SSF52540 147 362 1.56E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_22005 ce938e211d56ed18e120a90e6d27179f 796 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 32 116 5.7E-8 T 13-10-2018 IPR029464 Type I restriction enzyme R protein, N-terminal domain ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 SUPERFAMILY SSF82693 137 328 7.59E-23 T 13-10-2018 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 SUPERFAMILY SSF82714 716 799 3.27E-18 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 Gene3D G3DSA:3.30.2090.10 181 272 1.5E-270 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 Gene3D G3DSA:3.30.70.1430 560 662 1.5E-270 T 13-10-2018 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 SUPERFAMILY SSF82714 185 269 2.09E-15 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 0.0 T 13-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 SUPERFAMILY SSF82693 46 128 1.02E-20 T 13-10-2018 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 Gene3D G3DSA:1.20.1640.10 12 508 1.5E-270 T 13-10-2018 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 Gene3D G3DSA:1.20.1640.10 509 1030 1.5E-270 T 13-10-2018 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 Gene3D G3DSA:3.30.2090.10 714 802 1.5E-270 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 SUPERFAMILY SSF82866 800 1038 7.85E-46 T 13-10-2018 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 SUPERFAMILY SSF82866 294 499 4.97E-40 T 13-10-2018 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 7.1E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 7.1E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 7.1E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 7.1E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 7.1E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.1E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.1E-32 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 Gene3D G3DSA:3.30.70.1320 135 330 1.5E-270 T 13-10-2018 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 Gene3D G3DSA:3.30.70.1440 663 860 1.5E-270 T 13-10-2018 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 Gene3D G3DSA:3.30.70.1430 42 810 1.5E-270 T 13-10-2018 ambt_07220 258fa003a44255d3d9b5a3081d6b312e 1045 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 4.6E-240 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_19915 e94aa83dce859a68d268c2a06d168d61 157 Gene3D G3DSA:3.30.1490.190 89 148 3.5E-18 T 13-10-2018 ambt_19915 e94aa83dce859a68d268c2a06d168d61 157 SUPERFAMILY SSF46785 9 141 2.2E-33 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_19915 e94aa83dce859a68d268c2a06d168d61 157 Gene3D G3DSA:1.10.10.10 1 86 3.0E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_19915 e94aa83dce859a68d268c2a06d168d61 157 Pfam PF01475 Ferric uptake regulator family 17 135 7.9E-18 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ambt_06660 d7a801a9d6b183b0eeb03ff148724b4a 903 Pfam PF00593 TonB dependent receptor 362 900 3.0E-42 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_06660 d7a801a9d6b183b0eeb03ff148724b4a 903 SUPERFAMILY SSF56935 47 903 1.68E-89 T 13-10-2018 ambt_06660 d7a801a9d6b183b0eeb03ff148724b4a 903 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 179 6.9E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_06660 d7a801a9d6b183b0eeb03ff148724b4a 903 Gene3D G3DSA:2.170.130.10 40 184 2.5E-28 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SUPERFAMILY SSF51126 1165 1368 1.37E-9 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SUPERFAMILY SSF69318 1610 1893 3.92E-14 T 13-10-2018 ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 Pfam PF13229 Right handed beta helix region 496 647 2.9E-7 T 13-10-2018 IPR039448 Right handed beta helix domain ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 Pfam PF13229 Right handed beta helix region 1248 1346 1.2E-8 T 13-10-2018 IPR039448 Right handed beta helix domain ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 Gene3D G3DSA:2.160.20.10 215 542 1.3E-8 T 13-10-2018 IPR012334 Pectin lyase fold ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 Gene3D G3DSA:2.160.20.10 1233 1377 3.5E-12 T 13-10-2018 IPR012334 Pectin lyase fold ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 Gene3D G3DSA:2.160.20.10 543 694 3.2E-10 T 13-10-2018 IPR012334 Pectin lyase fold ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SUPERFAMILY SSF51126 956 1222 3.56E-10 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SUPERFAMILY SSF51126 252 534 2.3E-15 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 Gene3D G3DSA:2.160.20.10 975 1232 1.1E-8 T 13-10-2018 IPR012334 Pectin lyase fold ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SUPERFAMILY SSF51126 486 656 4.49E-5 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 1152 1172 3500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 579 600 620.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 1317 1339 1400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 348 369 5300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 421 441 2600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 556 578 300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 1206 1241 950.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 1294 1316 25.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 491 512 5100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 606 628 31.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 1109 1131 3700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 1179 1201 750.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 523 553 8000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 397 419 1200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 1244 1266 870.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 1267 1286 3800.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 464 484 4600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 629 651 2400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SMART SM00710 1061 1082 3900.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 SUPERFAMILY SSF103647 1390 1485 4.45E-15 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 ambt_18990 013e6e7725d798e20d10e0103c29c8a7 1907 Gene3D G3DSA:4.10.1080.10 1378 1471 1.5E-18 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 ambt_00385 8253b14804e0e9c744733bb48ce63802 227 Gene3D G3DSA:3.40.50.880 1 227 3.2E-78 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_00385 8253b14804e0e9c744733bb48ce63802 227 SUPERFAMILY SSF52317 1 226 1.97E-71 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_00385 8253b14804e0e9c744733bb48ce63802 227 Pfam PF01965 DJ-1/PfpI family 27 215 1.3E-17 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ambt_11565 2ff3254ee5307380424e867537c0c008 1437 SUPERFAMILY SSF52540 34 396 2.66E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02240 217df0579a00a9532452e32897c30264 292 Pfam PF01551 Peptidase family M23 191 285 2.8E-30 T 13-10-2018 IPR016047 Peptidase M23 ambt_02240 217df0579a00a9532452e32897c30264 292 Gene3D G3DSA:2.70.70.10 131 291 1.3E-45 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_02240 217df0579a00a9532452e32897c30264 292 SUPERFAMILY SSF51261 159 288 2.93E-52 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_14585 a11960417b3900fdcb2b4cde37a65ef6 188 PIRSF PIRSF006118 13 188 1.7E-61 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ambt_14585 a11960417b3900fdcb2b4cde37a65ef6 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 93 158 1.4E-9 T 13-10-2018 ambt_14585 a11960417b3900fdcb2b4cde37a65ef6 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 7.0E-47 T 13-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ambt_14585 a11960417b3900fdcb2b4cde37a65ef6 188 Gene3D G3DSA:3.40.50.1000 1 188 3.3E-52 T 13-10-2018 IPR023214 HAD superfamily ambt_14585 a11960417b3900fdcb2b4cde37a65ef6 188 SUPERFAMILY SSF56784 23 180 1.39E-38 T 13-10-2018 IPR036412 HAD-like superfamily ambt_16475 f8fae6d1f67ffd75aae4b42a74d6a242 594 Gene3D G3DSA:3.40.50.720 393 510 3.1E-9 T 13-10-2018 ambt_16475 f8fae6d1f67ffd75aae4b42a74d6a242 594 Gene3D G3DSA:1.20.1530.20 1 388 4.8E-14 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily ambt_16475 f8fae6d1f67ffd75aae4b42a74d6a242 594 Pfam PF00999 Sodium/hydrogen exchanger family 4 378 2.7E-31 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ambt_16475 f8fae6d1f67ffd75aae4b42a74d6a242 594 Pfam PF02254 TrkA-N domain 395 495 1.1E-6 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ambt_16475 f8fae6d1f67ffd75aae4b42a74d6a242 594 SUPERFAMILY SSF51735 395 497 1.67E-8 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_15415 2ee5ddeba09ef6131dc666414cb2b3a6 224 Gene3D G3DSA:3.40.600.10 3 223 3.9E-49 T 13-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 ambt_15415 2ee5ddeba09ef6131dc666414cb2b3a6 224 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 8 221 1.3E-86 T 13-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 ambt_15415 2ee5ddeba09ef6131dc666414cb2b3a6 224 Pfam PF02976 DNA mismatch repair enzyme MutH 56 154 2.3E-30 T 13-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 ambt_15415 2ee5ddeba09ef6131dc666414cb2b3a6 224 SMART SM00927 56 154 9.6E-51 T 13-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 ambt_15415 2ee5ddeba09ef6131dc666414cb2b3a6 224 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 224 125.798 T 13-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 ambt_15415 2ee5ddeba09ef6131dc666414cb2b3a6 224 SUPERFAMILY SSF52980 7 223 2.52E-66 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ambt_21175 afe470259ad58d636028612017af542b 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 9.7E-135 T 13-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 ambt_21175 afe470259ad58d636028612017af542b 332 SUPERFAMILY SSF51395 10 319 2.53E-92 T 13-10-2018 ambt_21175 afe470259ad58d636028612017af542b 332 Gene3D G3DSA:1.10.1200.80 252 327 1.5E-8 T 13-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 ambt_21175 afe470259ad58d636028612017af542b 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ambt_21175 afe470259ad58d636028612017af542b 332 PIRSF PIRSF006621 1 327 8.0E-109 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ambt_21175 afe470259ad58d636028612017af542b 332 Pfam PF01207 Dihydrouridine synthase (Dus) 13 317 3.8E-115 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ambt_21175 afe470259ad58d636028612017af542b 332 Gene3D G3DSA:3.20.20.70 6 249 6.3E-81 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_21175 afe470259ad58d636028612017af542b 332 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.284 T 13-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 ambt_08840 13462be037686ed7310116608e311f6e 367 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 2 361 39.621 T 13-10-2018 IPR014524 Outer membrane protein assembly factor BamC ambt_08840 13462be037686ed7310116608e311f6e 367 Gene3D G3DSA:3.30.310.170 242 366 4.5E-37 T 13-10-2018 ambt_08840 13462be037686ed7310116608e311f6e 367 Pfam PF06804 NlpB/DapX lipoprotein 33 360 1.3E-100 T 13-10-2018 IPR010653 NlpB/DapX lipoprotein ambt_19200 a345c97d3976b1802c8f316014d5b8a8 185 Gene3D G3DSA:1.10.10.10 6 85 2.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_19200 a345c97d3976b1802c8f316014d5b8a8 185 SUPERFAMILY SSF46785 6 145 5.17E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_19200 a345c97d3976b1802c8f316014d5b8a8 185 Pfam PF12802 MarR family 22 72 5.7E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ambt_19200 a345c97d3976b1802c8f316014d5b8a8 185 PIRSF PIRSF006707 1 176 5.8E-47 T 13-10-2018 IPR026282 DNA-binding protein, MJ1563 type ambt_00260 6bc1637a120625185afb3375adc619b8 350 PRINTS PR00069 Aldo-keto reductase signature 114 132 2.1E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_00260 6bc1637a120625185afb3375adc619b8 350 PRINTS PR00069 Aldo-keto reductase signature 168 185 2.1E-5 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ambt_00260 6bc1637a120625185afb3375adc619b8 350 SUPERFAMILY SSF51430 1 347 1.05E-90 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_00260 6bc1637a120625185afb3375adc619b8 350 Gene3D G3DSA:3.20.20.100 1 348 3.5E-105 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_00260 6bc1637a120625185afb3375adc619b8 350 Pfam PF00248 Aldo/keto reductase family 16 342 6.8E-63 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain ambt_21015 e9d2c96bad9a0a01eb027d7320abc1c2 96 SMART SM00883 2 95 1.9E-49 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ambt_21015 e9d2c96bad9a0a01eb027d7320abc1c2 96 PRINTS PR00297 10kDa chaperonin signature 60 72 8.1E-29 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ambt_21015 e9d2c96bad9a0a01eb027d7320abc1c2 96 PRINTS PR00297 10kDa chaperonin signature 3 18 8.1E-29 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ambt_21015 e9d2c96bad9a0a01eb027d7320abc1c2 96 PRINTS PR00297 10kDa chaperonin signature 25 46 8.1E-29 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ambt_21015 e9d2c96bad9a0a01eb027d7320abc1c2 96 PRINTS PR00297 10kDa chaperonin signature 82 95 8.1E-29 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ambt_21015 e9d2c96bad9a0a01eb027d7320abc1c2 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.466 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ambt_21015 e9d2c96bad9a0a01eb027d7320abc1c2 96 SUPERFAMILY SSF50129 1 96 1.88E-30 T 13-10-2018 IPR011032 GroES-like superfamily ambt_21015 e9d2c96bad9a0a01eb027d7320abc1c2 96 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 4.5E-30 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ambt_21015 e9d2c96bad9a0a01eb027d7320abc1c2 96 Gene3D G3DSA:2.30.33.40 1 96 3.5E-36 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 ambt_21015 e9d2c96bad9a0a01eb027d7320abc1c2 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 ambt_01305 397bef25595e481708f96d625bb5ab8c 360 Pfam PF03747 ADP-ribosylglycohydrolase 13 333 6.2E-40 T 13-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 ambt_01305 397bef25595e481708f96d625bb5ab8c 360 SUPERFAMILY SSF101478 7 334 4.97E-19 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily ambt_01305 397bef25595e481708f96d625bb5ab8c 360 Gene3D G3DSA:1.10.4080.10 88 358 1.3E-10 T 13-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily ambt_11685 d6e90d1ccdc1b1a8503d5729afba3f42 91 Pfam PF13670 Peptidase propeptide and YPEB domain 9 83 4.9E-9 T 13-10-2018 IPR025711 PepSY domain ambt_14955 3fe80aeb487de5c14aae2112b348d0dc 278 Gene3D G3DSA:1.10.3210.10 1 274 1.7E-54 T 13-10-2018 ambt_14955 3fe80aeb487de5c14aae2112b348d0dc 278 Pfam PF08668 HDOD domain 22 211 3.8E-34 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD ambt_14955 3fe80aeb487de5c14aae2112b348d0dc 278 SUPERFAMILY SSF109604 11 249 4.27E-46 T 13-10-2018 ambt_15455 2bf1144058ba532f58dbf67ebca99470 457 Gene3D G3DSA:2.20.200.10 104 343 1.9E-83 T 13-10-2018 ambt_15455 2bf1144058ba532f58dbf67ebca99470 457 SUPERFAMILY SSF56954 10 454 1.27E-74 T 13-10-2018 ambt_15455 2bf1144058ba532f58dbf67ebca99470 457 Gene3D G3DSA:1.20.1600.10 67 453 1.9E-83 T 13-10-2018 ambt_15455 2bf1144058ba532f58dbf67ebca99470 457 Pfam PF02321 Outer membrane efflux protein 67 245 6.3E-21 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_15455 2bf1144058ba532f58dbf67ebca99470 457 Pfam PF02321 Outer membrane efflux protein 270 452 7.8E-15 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 Pfam PF01556 DnaJ C terminal domain 121 333 1.2E-45 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 SMART SM00271 4 62 9.0E-29 T 13-10-2018 IPR001623 DnaJ domain ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 SUPERFAMILY SSF49493 114 267 5.62E-21 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 13-10-2018 IPR018253 DnaJ domain, conserved site ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 SUPERFAMILY SSF57938 134 210 5.49E-23 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 PRINTS PR00625 DnaJ domain signature 7 25 3.6E-30 T 13-10-2018 IPR001623 DnaJ domain ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 PRINTS PR00625 DnaJ domain signature 42 62 3.6E-30 T 13-10-2018 IPR001623 DnaJ domain ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 PRINTS PR00625 DnaJ domain signature 25 40 3.6E-30 T 13-10-2018 IPR001623 DnaJ domain ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 PRINTS PR00625 DnaJ domain signature 62 81 3.6E-30 T 13-10-2018 IPR001623 DnaJ domain ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 Gene3D G3DSA:1.10.287.110 1 113 9.6E-36 T 13-10-2018 IPR036869 Chaperone J-domain superfamily ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 42.05 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 Pfam PF00226 DnaJ domain 5 67 1.3E-26 T 13-10-2018 IPR001623 DnaJ domain ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 Gene3D G3DSA:2.60.260.20 255 363 1.1E-28 T 13-10-2018 ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 SUPERFAMILY SSF46565 1 106 7.46E-36 T 13-10-2018 IPR036869 Chaperone J-domain superfamily ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 Pfam PF00684 DnaJ central domain 147 207 1.5E-15 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 SUPERFAMILY SSF49493 259 344 4.84E-22 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 350 1.7E-139 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ambt_11510 9f50013c23f5a6b440a838c5997a7d76 378 Gene3D G3DSA:2.10.230.10 139 209 3.4E-25 T 13-10-2018 ambt_03795 454891840c9892d7d778d2c614c15a4d 354 Gene3D G3DSA:3.40.1780.10 14 351 3.6E-118 T 13-10-2018 ambt_03795 454891840c9892d7d778d2c614c15a4d 354 Pfam PF02547 Queuosine biosynthesis protein 3 351 6.2E-134 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ambt_03795 454891840c9892d7d778d2c614c15a4d 354 SUPERFAMILY SSF111337 1 351 1.83E-136 T 13-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ambt_03795 454891840c9892d7d778d2c614c15a4d 354 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 352 47.194 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ambt_03795 454891840c9892d7d778d2c614c15a4d 354 Gene3D G3DSA:2.40.10.240 64 161 3.6E-118 T 13-10-2018 ambt_03795 454891840c9892d7d778d2c614c15a4d 354 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 351 2.2E-150 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 Gene3D G3DSA:1.10.287.130 23 90 1.9E-16 T 13-10-2018 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 SUPERFAMILY SSF47384 32 91 5.3E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 Gene3D G3DSA:3.30.565.10 91 255 3.1E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 SUPERFAMILY SSF55874 79 250 3.27E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 Pfam PF01627 Hpt domain 631 698 6.4E-8 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 Gene3D G3DSA:1.20.120.160 608 716 8.0E-17 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 Gene3D G3DSA:3.40.50.2300 393 535 2.4E-37 T 13-10-2018 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 Pfam PF00072 Response regulator receiver domain 414 525 4.7E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 Pfam PF00512 His Kinase A (phospho-acceptor) domain 33 90 7.2E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 SUPERFAMILY SSF47226 599 715 5.1E-18 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 SMART SM00387 137 253 3.9E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 SUPERFAMILY SSF52172 410 537 1.57E-32 T 13-10-2018 IPR011006 CheY-like superfamily ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 SMART SM00448 412 533 4.1E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 138 250 6.9E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 SMART SM00388 26 90 9.5E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 196 206 1.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 178 192 1.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 237 250 1.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_10235 3de4a0c780af1f8d6c7714383374fffc 717 PRINTS PR00344 Bacterial sensor protein C-terminal signature 213 231 1.8E-13 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_21070 daac8f2496af59ceea8e3a3ad841cfcd 49 Pfam PF14255 Cysteine-rich CPXCG 3 39 5.2E-8 T 13-10-2018 IPR025990 Cysteine-rich CPXCG protein ambt_13060 7551dac6138e5e671c8fe5580d237a6f 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 8.4E-159 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 ambt_13060 7551dac6138e5e671c8fe5580d237a6f 376 PIRSF PIRSF015658 1 376 1.6E-175 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 ambt_13060 7551dac6138e5e671c8fe5580d237a6f 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 7.2E-170 T 13-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 SMART SM00846 3 150 3.9E-98 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 3.5E-70 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 SUPERFAMILY SSF55347 149 312 2.34E-78 T 13-10-2018 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 1.6E-139 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 Gene3D G3DSA:3.30.360.10 149 314 4.8E-156 T 13-10-2018 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.0E-47 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.0E-47 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.0E-47 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 2.0E-47 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 2.0E-47 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 Gene3D G3DSA:3.40.50.720 4 326 4.8E-156 T 13-10-2018 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 PIRSF PIRSF000149 1 331 9.5E-134 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 SUPERFAMILY SSF51735 3 166 1.66E-68 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.1E-41 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_05845 22ef60a7fc8b241ad2f17ad515d43d2a 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_16485 0e26e045c2f16f46484b844ffe886788 344 Gene3D G3DSA:3.40.50.2000 9 168 4.4E-35 T 13-10-2018 ambt_16485 0e26e045c2f16f46484b844ffe886788 344 Gene3D G3DSA:3.40.50.2000 173 344 1.9E-35 T 13-10-2018 ambt_16485 0e26e045c2f16f46484b844ffe886788 344 SUPERFAMILY SSF53756 9 344 7.22E-75 T 13-10-2018 ambt_16485 0e26e045c2f16f46484b844ffe886788 344 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 86 321 3.1E-38 T 13-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 ambt_21060 97380114f802afa4b79ae5d203b9b0e0 142 Pfam PF10985 Protein of unknown function (DUF2805) 64 134 6.5E-33 T 13-10-2018 IPR019882 Conserved hypothetical protein CHP03643 ambt_21060 97380114f802afa4b79ae5d203b9b0e0 142 TIGRFAM TIGR03643 TIGR03643: TIGR03643 family protein 63 131 4.9E-33 T 13-10-2018 IPR019882 Conserved hypothetical protein CHP03643 ambt_16540 df58f2d2bbdffb6fc69d39b917af741c 212 SUPERFAMILY SSF50447 2 211 2.74E-80 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ambt_16540 df58f2d2bbdffb6fc69d39b917af741c 212 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 40.276 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_16540 df58f2d2bbdffb6fc69d39b917af741c 212 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 3.7E-90 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_16540 df58f2d2bbdffb6fc69d39b917af741c 212 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site ambt_16540 df58f2d2bbdffb6fc69d39b917af741c 212 Gene3D G3DSA:2.40.50.620 33 99 6.5E-16 T 13-10-2018 ambt_16540 df58f2d2bbdffb6fc69d39b917af741c 212 Gene3D G3DSA:2.40.30.10 133 212 1.7E-17 T 13-10-2018 ambt_16540 df58f2d2bbdffb6fc69d39b917af741c 212 Pfam PF00297 Ribosomal protein L3 67 184 9.3E-15 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_00770 799848317ce901c7ed1c07ac932c549a 192 Gene3D G3DSA:3.40.470.10 3 192 3.2E-59 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ambt_00770 799848317ce901c7ed1c07ac932c549a 192 SMART SM00986 32 184 5.4E-25 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ambt_00770 799848317ce901c7ed1c07ac932c549a 192 SUPERFAMILY SSF52141 9 187 1.93E-47 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ambt_00770 799848317ce901c7ed1c07ac932c549a 192 Pfam PF03167 Uracil DNA glycosylase superfamily 37 178 2.1E-25 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ambt_00770 799848317ce901c7ed1c07ac932c549a 192 SMART SM00987 32 184 5.4E-25 T 13-10-2018 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 Pfam PF13365 Trypsin-like peptidase domain 92 227 1.4E-32 T 13-10-2018 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 Gene3D G3DSA:2.30.42.10 365 455 2.4E-23 T 13-10-2018 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 Gene3D G3DSA:2.40.10.120 39 260 1.3E-87 T 13-10-2018 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 SUPERFAMILY SSF50156 224 349 3.02E-25 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 374 442 5.3E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.0E-57 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 PRINTS PR00834 HtrA/DegQ protease family signature 163 187 1.0E-57 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 PRINTS PR00834 HtrA/DegQ protease family signature 306 318 1.0E-57 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 PRINTS PR00834 HtrA/DegQ protease family signature 198 215 1.0E-57 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.0E-57 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 1.0E-57 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 Pfam PF13180 PDZ domain 288 357 7.6E-16 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 452 1.9E-155 T 13-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 SUPERFAMILY SSF50494 40 257 5.58E-67 T 13-10-2018 IPR009003 Peptidase S1, PA clan ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 SUPERFAMILY SSF50156 386 453 8.15E-14 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 Gene3D G3DSA:2.30.42.10 261 364 8.5E-26 T 13-10-2018 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 SMART SM00228 373 446 4.8E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_14530 219bc15c1b364886c61a55ac1d9195ba 455 SMART SM00228 266 348 5.3E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_07205 a05de7f3857fa67e68c385d590988dc1 174 Pfam PF04214 Protein of unknown function, DUF 79 141 1.6E-21 T 13-10-2018 IPR007332 Protein of unknown function DUF411 ambt_09525 31058c7cf6784ebcd5f8adb52d8151a6 321 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 1 306 5.2E-75 T 13-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 ambt_09525 31058c7cf6784ebcd5f8adb52d8151a6 321 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 193 308 1.2E-15 T 13-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_09525 31058c7cf6784ebcd5f8adb52d8151a6 321 SUPERFAMILY SSF52540 2 188 3.51E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_09525 31058c7cf6784ebcd5f8adb52d8151a6 321 Gene3D G3DSA:1.20.272.10 192 314 2.0E-31 T 13-10-2018 ambt_09525 31058c7cf6784ebcd5f8adb52d8151a6 321 Gene3D G3DSA:1.10.8.60 121 191 5.0E-23 T 13-10-2018 ambt_09525 31058c7cf6784ebcd5f8adb52d8151a6 321 Pfam PF06144 DNA polymerase III, delta subunit 2 168 5.0E-29 T 13-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 ambt_09525 31058c7cf6784ebcd5f8adb52d8151a6 321 SUPERFAMILY SSF48019 190 308 3.1E-26 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ambt_09525 31058c7cf6784ebcd5f8adb52d8151a6 321 Gene3D G3DSA:3.40.50.300 1 118 3.5E-39 T 13-10-2018 ambt_12680 c0897d36ebed907e86cc847e0c80e735 41 Pfam PF11346 Protein of unknown function (DUF3149) 4 38 4.4E-6 T 13-10-2018 IPR021494 Protein of unknown function DUF3149 ambt_02390 0e43abe262cb92f2a7422a63d3228369 218 Gene3D G3DSA:3.30.70.260 125 196 1.5E-77 T 13-10-2018 ambt_02390 0e43abe262cb92f2a7422a63d3228369 218 Gene3D G3DSA:3.40.50.1360 7 206 1.5E-77 T 13-10-2018 ambt_02390 0e43abe262cb92f2a7422a63d3228369 218 SUPERFAMILY SSF75445 127 198 1.7E-24 T 13-10-2018 ambt_02390 0e43abe262cb92f2a7422a63d3228369 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 4.1E-58 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 ambt_02390 0e43abe262cb92f2a7422a63d3228369 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 2.3E-70 T 13-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 ambt_02390 0e43abe262cb92f2a7422a63d3228369 218 SUPERFAMILY SSF100950 1 146 1.13E-44 T 13-10-2018 IPR037171 NagB/RpiA transferase-like ambt_02390 0e43abe262cb92f2a7422a63d3228369 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.695 T 13-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 ambt_17520 88a363f34e3c1f1fdbb54dd70ed33b0f 445 Pfam PF03448 MgtE intracellular N domain 34 132 4.1E-17 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain ambt_17520 88a363f34e3c1f1fdbb54dd70ed33b0f 445 Gene3D G3DSA:1.10.357.20 271 444 3.4E-48 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain ambt_17520 88a363f34e3c1f1fdbb54dd70ed33b0f 445 Gene3D G3DSA:1.25.60.10 3 129 1.3E-7 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily ambt_17520 88a363f34e3c1f1fdbb54dd70ed33b0f 445 SUPERFAMILY SSF54631 134 270 4.45E-11 T 13-10-2018 ambt_17520 88a363f34e3c1f1fdbb54dd70ed33b0f 445 Pfam PF01769 Divalent cation transporter 316 437 4.9E-26 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 ambt_17520 88a363f34e3c1f1fdbb54dd70ed33b0f 445 Gene3D G3DSA:3.10.580.10 130 255 1.0E-33 T 13-10-2018 ambt_17520 88a363f34e3c1f1fdbb54dd70ed33b0f 445 SUPERFAMILY SSF161093 273 444 7.45E-49 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 ambt_17520 88a363f34e3c1f1fdbb54dd70ed33b0f 445 SUPERFAMILY SSF158791 20 131 3.53E-16 T 13-10-2018 ambt_17520 88a363f34e3c1f1fdbb54dd70ed33b0f 445 SMART SM00924 31 134 3.2E-18 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain ambt_02675 1c2987e54de2d876870f6c04ced17874 224 SUPERFAMILY SSF55469 18 223 9.42E-43 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ambt_02675 1c2987e54de2d876870f6c04ced17874 224 Gene3D G3DSA:3.40.109.10 10 223 3.4E-53 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ambt_02675 1c2987e54de2d876870f6c04ced17874 224 Pfam PF00881 Nitroreductase family 32 200 6.7E-22 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ambt_14340 01ff691bfa14aac89e71aace75af15ee 332 Pfam PF00582 Universal stress protein family 179 311 3.4E-12 T 13-10-2018 IPR006016 UspA ambt_14340 01ff691bfa14aac89e71aace75af15ee 332 Pfam PF00582 Universal stress protein family 5 142 9.2E-10 T 13-10-2018 IPR006016 UspA ambt_14340 01ff691bfa14aac89e71aace75af15ee 332 SUPERFAMILY SSF52402 150 321 1.84E-19 T 13-10-2018 ambt_14340 01ff691bfa14aac89e71aace75af15ee 332 Gene3D G3DSA:3.40.50.12370 1 329 5.4E-83 T 13-10-2018 ambt_14340 01ff691bfa14aac89e71aace75af15ee 332 SUPERFAMILY SSF52402 5 142 6.95E-15 T 13-10-2018 ambt_17910 a05f30582a24e8778ceca1c07e4ff8f6 331 SUPERFAMILY SSF51569 15 315 5.13E-49 T 13-10-2018 ambt_17910 a05f30582a24e8778ceca1c07e4ff8f6 331 Gene3D G3DSA:3.20.20.70 15 318 1.3E-45 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_17910 a05f30582a24e8778ceca1c07e4ff8f6 331 PIRSF PIRSF001365 13 326 4.3E-52 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_17910 a05f30582a24e8778ceca1c07e4ff8f6 331 Pfam PF00701 Dihydrodipicolinate synthetase family 34 305 1.2E-22 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_17910 a05f30582a24e8778ceca1c07e4ff8f6 331 SMART SM01130 14 319 4.3E-25 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_17910 a05f30582a24e8778ceca1c07e4ff8f6 331 PRINTS PR00146 Dihydrodipicolinate synthase signature 91 109 8.8E-7 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_17910 a05f30582a24e8778ceca1c07e4ff8f6 331 PRINTS PR00146 Dihydrodipicolinate synthase signature 55 76 8.8E-7 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_22095 8572c8e5ed35f121d4827b9afe7f6d4c 510 Gene3D G3DSA:1.20.1250.20 283 499 2.7E-10 T 13-10-2018 ambt_22095 8572c8e5ed35f121d4827b9afe7f6d4c 510 Gene3D G3DSA:1.20.1250.20 9 207 6.0E-12 T 13-10-2018 ambt_22095 8572c8e5ed35f121d4827b9afe7f6d4c 510 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 61 85 - T 13-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 ambt_22095 8572c8e5ed35f121d4827b9afe7f6d4c 510 Pfam PF13347 MFS/sugar transport protein 251 492 4.2E-40 T 13-10-2018 ambt_22095 8572c8e5ed35f121d4827b9afe7f6d4c 510 Pfam PF13347 MFS/sugar transport protein 12 243 1.7E-59 T 13-10-2018 ambt_22095 8572c8e5ed35f121d4827b9afe7f6d4c 510 SUPERFAMILY SSF103473 14 492 3.27E-30 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_11130 c90575959465117813e685d27378d881 297 SUPERFAMILY SSF53850 92 295 3.62E-33 T 13-10-2018 ambt_11130 c90575959465117813e685d27378d881 297 Gene3D G3DSA:3.40.190.10 163 261 3.6E-59 T 13-10-2018 ambt_11130 c90575959465117813e685d27378d881 297 Gene3D G3DSA:3.40.190.10 103 288 3.6E-59 T 13-10-2018 ambt_11130 c90575959465117813e685d27378d881 297 Pfam PF03466 LysR substrate binding domain 90 289 4.1E-34 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_11130 c90575959465117813e685d27378d881 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.4E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_11130 c90575959465117813e685d27378d881 297 Gene3D G3DSA:1.10.10.10 7 95 7.9E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_11130 c90575959465117813e685d27378d881 297 SUPERFAMILY SSF46785 2 85 5.02E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_11130 c90575959465117813e685d27378d881 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.9E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_11130 c90575959465117813e685d27378d881 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.9E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_11130 c90575959465117813e685d27378d881 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.9E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_04445 fe16b865c65ccbfb14fccb79cd0a6ee9 203 Pfam PF08281 Sigma-70, region 4 143 195 3.4E-13 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_04445 fe16b865c65ccbfb14fccb79cd0a6ee9 203 Gene3D G3DSA:1.10.10.10 136 203 1.5E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_04445 fe16b865c65ccbfb14fccb79cd0a6ee9 203 SUPERFAMILY SSF88946 26 122 1.65E-21 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_04445 fe16b865c65ccbfb14fccb79cd0a6ee9 203 Gene3D G3DSA:1.10.1740.10 24 106 5.3E-23 T 13-10-2018 ambt_04445 fe16b865c65ccbfb14fccb79cd0a6ee9 203 SUPERFAMILY SSF88659 146 200 2.06E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_04445 fe16b865c65ccbfb14fccb79cd0a6ee9 203 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 198 3.0E-25 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_04445 fe16b865c65ccbfb14fccb79cd0a6ee9 203 Pfam PF04542 Sigma-70 region 2 43 109 7.8E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_13490 6a5fc77ef3cab42e9f86a6d4f49a2089 247 SUPERFAMILY SSF117143 77 205 3.27E-20 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ambt_13490 6a5fc77ef3cab42e9f86a6d4f49a2089 247 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 243 2.5E-24 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ambt_13490 6a5fc77ef3cab42e9f86a6d4f49a2089 247 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 3.7E-33 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ambt_19110 0808d7f15ebbfe27168542380b739f3d 179 Gene3D G3DSA:3.30.1440.10 1 179 1.3E-79 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19110 0808d7f15ebbfe27168542380b739f3d 179 PIRSF PIRSF002161 1 179 2.9E-65 T 13-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19110 0808d7f15ebbfe27168542380b739f3d 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.343 T 13-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19110 0808d7f15ebbfe27168542380b739f3d 179 SUPERFAMILY SSF55282 4 179 6.12E-78 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19110 0808d7f15ebbfe27168542380b739f3d 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 13-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19110 0808d7f15ebbfe27168542380b739f3d 179 Pfam PF00281 Ribosomal protein L5 24 80 1.3E-26 T 13-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19110 0808d7f15ebbfe27168542380b739f3d 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.9E-41 T 13-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_01965 ff221d48ec805a93767e59f92eb6056a 219 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 54 63 - T 13-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ambt_01965 ff221d48ec805a93767e59f92eb6056a 219 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 3 210 4.9E-86 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ambt_01965 ff221d48ec805a93767e59f92eb6056a 219 Pfam PF03167 Uracil DNA glycosylase superfamily 51 206 2.3E-26 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ambt_01965 ff221d48ec805a93767e59f92eb6056a 219 SMART SM00986 46 207 1.6E-41 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ambt_01965 ff221d48ec805a93767e59f92eb6056a 219 SMART SM00987 46 207 1.6E-41 T 13-10-2018 ambt_01965 ff221d48ec805a93767e59f92eb6056a 219 SUPERFAMILY SSF52141 3 218 4.36E-93 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ambt_01965 ff221d48ec805a93767e59f92eb6056a 219 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 1 218 39.516 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ambt_01965 ff221d48ec805a93767e59f92eb6056a 219 Gene3D G3DSA:3.40.470.10 1 219 1.1E-102 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ambt_21030 2d918a4e63572523f2de5618c17e49b4 276 Pfam PF01551 Peptidase family M23 160 257 5.5E-21 T 13-10-2018 IPR016047 Peptidase M23 ambt_21030 2d918a4e63572523f2de5618c17e49b4 276 SUPERFAMILY SSF51261 135 258 1.41E-26 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_21030 2d918a4e63572523f2de5618c17e49b4 276 Gene3D G3DSA:2.70.70.10 130 274 3.8E-32 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_19600 996da13db1a7b5ae88c2db8953696cdc 369 Pfam PF07859 alpha/beta hydrolase fold 141 338 1.8E-37 T 13-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 ambt_19600 996da13db1a7b5ae88c2db8953696cdc 369 SUPERFAMILY SSF53474 75 360 8.76E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_19600 996da13db1a7b5ae88c2db8953696cdc 369 Gene3D G3DSA:3.40.50.1820 48 362 2.1E-81 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_03960 82e699073c608f40304ec4457d3a3843 342 SUPERFAMILY SSF54106 290 334 4.84E-8 T 13-10-2018 ambt_03960 82e699073c608f40304ec4457d3a3843 342 SUPERFAMILY SSF48452 26 213 7.59E-24 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03960 82e699073c608f40304ec4457d3a3843 342 Pfam PF01476 LysM domain 292 334 2.7E-8 T 13-10-2018 IPR018392 LysM domain ambt_03960 82e699073c608f40304ec4457d3a3843 342 Gene3D G3DSA:1.25.40.10 29 248 2.3E-43 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03960 82e699073c608f40304ec4457d3a3843 342 SMART SM00257 291 335 1.2E-6 T 13-10-2018 IPR018392 LysM domain ambt_03960 82e699073c608f40304ec4457d3a3843 342 Gene3D G3DSA:3.10.350.10 275 340 1.4E-10 T 13-10-2018 IPR036779 LysM domain superfamily ambt_03960 82e699073c608f40304ec4457d3a3843 342 SMART SM00028 34 67 3.9E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_03960 82e699073c608f40304ec4457d3a3843 342 SMART SM00028 68 101 9.5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_03960 82e699073c608f40304ec4457d3a3843 342 SMART SM00028 102 135 350.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_03960 82e699073c608f40304ec4457d3a3843 342 SMART SM00028 138 171 3.2E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_03960 82e699073c608f40304ec4457d3a3843 342 Pfam PF13181 Tetratricopeptide repeat 35 65 8.0E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_03960 82e699073c608f40304ec4457d3a3843 342 Pfam PF13424 Tetratricopeptide repeat 104 167 2.2E-9 T 13-10-2018 ambt_03960 82e699073c608f40304ec4457d3a3843 342 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 5 237 2.8E-68 T 13-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW ambt_10665 d8e9fcb7839aa4b6098e6cc6b0bab1d7 182 Gene3D G3DSA:3.10.560.10 28 180 3.5E-20 T 13-10-2018 ambt_10665 d8e9fcb7839aa4b6098e6cc6b0bab1d7 182 Pfam PF10531 SLBB domain 110 161 1.1E-10 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_10665 d8e9fcb7839aa4b6098e6cc6b0bab1d7 182 Pfam PF02563 Polysaccharide biosynthesis/export protein 31 103 1.0E-17 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 ambt_10665 d8e9fcb7839aa4b6098e6cc6b0bab1d7 182 Gene3D G3DSA:3.30.1950.10 36 107 3.5E-20 T 13-10-2018 ambt_13560 43da3225c5fd654fd4a39fae51efb91c 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 134 186 2.7E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_13560 43da3225c5fd654fd4a39fae51efb91c 199 SMART SM00421 132 189 2.7E-17 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_13560 43da3225c5fd654fd4a39fae51efb91c 199 SUPERFAMILY SSF46894 128 188 1.6E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_13560 43da3225c5fd654fd4a39fae51efb91c 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 135 149 5.9E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_13560 43da3225c5fd654fd4a39fae51efb91c 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 165 5.9E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_13560 43da3225c5fd654fd4a39fae51efb91c 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 177 5.9E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_13560 43da3225c5fd654fd4a39fae51efb91c 199 Gene3D G3DSA:3.40.50.12740 48 190 3.6E-22 T 13-10-2018 ambt_13560 43da3225c5fd654fd4a39fae51efb91c 199 ProSitePatterns PS00622 LuxR-type HTH domain signature. 149 176 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 Gene3D G3DSA:3.30.365.10 44 177 4.4E-21 T 13-10-2018 ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 PIRSF PIRSF036389 1 751 1.8E-231 T 13-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 Gene3D G3DSA:3.30.365.10 350 441 2.6E-48 T 13-10-2018 ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 SUPERFAMILY SSF56003 322 745 1.86E-111 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 319 600 3.3E-31 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 46 192 2.4E-14 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 616 699 1.8E-15 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 Gene3D G3DSA:3.30.365.10 326 546 2.6E-48 T 13-10-2018 ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 SUPERFAMILY SSF56003 21 242 1.26E-34 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 Gene3D G3DSA:3.30.365.10 604 749 3.2E-37 T 13-10-2018 ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 Gene3D G3DSA:3.90.1170.50 179 292 8.9E-10 T 13-10-2018 ambt_09860 1cc42ce0b773e052c8038c964d94df4d 751 SMART SM01008 209 298 2.2E-18 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ambt_03560 2e0cc02e0d70281150102020d3e3d3ed 522 SUPERFAMILY SSF57997 174 303 5.82E-5 T 13-10-2018 ambt_03560 2e0cc02e0d70281150102020d3e3d3ed 522 Pfam PF02706 Chain length determinant protein 9 96 1.7E-6 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 ambt_03560 2e0cc02e0d70281150102020d3e3d3ed 522 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 10 511 4.8E-153 T 13-10-2018 IPR014345 PEP-CTERM locus polysaccharide chain length determinant ambt_07570 79a35c52712522f078aef47519ca7182 236 SUPERFAMILY SSF46548 105 233 3.84E-41 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ambt_07570 79a35c52712522f078aef47519ca7182 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 7.2E-10 T 13-10-2018 ambt_07570 79a35c52712522f078aef47519ca7182 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ambt_07570 79a35c52712522f078aef47519ca7182 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 2.1E-31 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_07570 79a35c52712522f078aef47519ca7182 236 Gene3D G3DSA:1.10.1060.10 105 236 2.0E-59 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ambt_07570 79a35c52712522f078aef47519ca7182 236 Gene3D G3DSA:3.10.20.30 1 104 1.1E-35 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_07570 79a35c52712522f078aef47519ca7182 236 SUPERFAMILY SSF54292 1 104 6.69E-30 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ambt_07570 79a35c52712522f078aef47519ca7182 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 228 2.6E-89 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ambt_02090 13d2fef64d1dc4044fa7984a120eaee6 603 SUPERFAMILY SSF50969 163 601 4.32E-8 T 13-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like ambt_02090 13d2fef64d1dc4044fa7984a120eaee6 603 Gene3D G3DSA:2.130.10.10 51 324 2.6E-6 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_14225 3a3c3917190ad20cc775a52a94e6c538 567 SUPERFAMILY SSF52151 4 274 8.11E-18 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ambt_14225 3a3c3917190ad20cc775a52a94e6c538 567 Gene3D G3DSA:3.40.1090.10 2 131 5.4E-6 T 13-10-2018 ambt_14225 3a3c3917190ad20cc775a52a94e6c538 567 Pfam PF01734 Patatin-like phospholipase 8 266 7.2E-16 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ambt_00475 c2c2c182db3a8449582dba871b026bf7 343 SUPERFAMILY SSF143631 31 339 3.92E-98 T 13-10-2018 IPR003374 ApbE-like superfamily ambt_00475 c2c2c182db3a8449582dba871b026bf7 343 PIRSF PIRSF006268 3 339 2.8E-93 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 ambt_00475 c2c2c182db3a8449582dba871b026bf7 343 Gene3D G3DSA:3.10.520.20 20 343 3.5E-112 T 13-10-2018 ambt_00475 c2c2c182db3a8449582dba871b026bf7 343 Pfam PF02424 ApbE family 38 317 1.7E-85 T 13-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 ambt_03580 f00852b74b51e47845532731fe8e5c98 358 SUPERFAMILY SSF55729 172 328 7.42E-11 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_03580 f00852b74b51e47845532731fe8e5c98 358 Pfam PF13480 Acetyltransferase (GNAT) domain 173 317 8.1E-15 T 13-10-2018 IPR038740 BioF2-like, acetyltransferase domain KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 ambt_08400 35217085fd486521e00196829d6757eb 354 Pfam PF01965 DJ-1/PfpI family 75 189 2.3E-9 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ambt_08400 35217085fd486521e00196829d6757eb 354 SUPERFAMILY SSF52317 56 277 2.29E-54 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_08400 35217085fd486521e00196829d6757eb 354 Gene3D G3DSA:3.40.50.880 29 280 5.0E-60 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_18245 58fac50a9eb8ce41cc4224b63e23a158 276 SUPERFAMILY SSF82861 21 106 1.83E-16 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ambt_18245 58fac50a9eb8ce41cc4224b63e23a158 276 Pfam PF00924 Mechanosensitive ion channel 66 262 3.1E-51 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ambt_18245 58fac50a9eb8ce41cc4224b63e23a158 276 Gene3D G3DSA:2.30.30.60 123 172 7.4E-20 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ambt_18245 58fac50a9eb8ce41cc4224b63e23a158 276 SUPERFAMILY SSF50182 108 173 3.27E-18 T 13-10-2018 IPR010920 LSM domain superfamily ambt_18245 58fac50a9eb8ce41cc4224b63e23a158 276 Gene3D G3DSA:3.30.70.100 174 266 1.6E-23 T 13-10-2018 ambt_18245 58fac50a9eb8ce41cc4224b63e23a158 276 SUPERFAMILY SSF82689 175 273 1.44E-28 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ambt_19490 141192dc8e8159409f66f2f9f918f249 362 Gene3D G3DSA:3.40.50.620 12 85 1.0E-52 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_19490 141192dc8e8159409f66f2f9f918f249 362 Gene3D G3DSA:3.40.50.620 231 279 1.6E-18 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_19490 141192dc8e8159409f66f2f9f918f249 362 SUPERFAMILY SSF52374 11 315 5.91E-67 T 13-10-2018 ambt_19490 141192dc8e8159409f66f2f9f918f249 362 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 214 327 3.7E-13 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ambt_19490 141192dc8e8159409f66f2f9f918f249 362 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 14 167 5.2E-25 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ambt_19490 141192dc8e8159409f66f2f9f918f249 362 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 11 322 1.8E-88 T 13-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 ambt_19490 141192dc8e8159409f66f2f9f918f249 362 Gene3D G3DSA:3.90.800.10 207 230 1.6E-18 T 13-10-2018 ambt_19490 141192dc8e8159409f66f2f9f918f249 362 Gene3D G3DSA:3.40.50.620 86 168 1.0E-52 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_19490 141192dc8e8159409f66f2f9f918f249 362 PRINTS PR00987 Glutamyl-tRNA synthetase signature 14 26 1.3E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_19490 141192dc8e8159409f66f2f9f918f249 362 PRINTS PR00987 Glutamyl-tRNA synthetase signature 43 56 1.3E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_19490 141192dc8e8159409f66f2f9f918f249 362 PRINTS PR00987 Glutamyl-tRNA synthetase signature 245 253 1.3E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_19490 141192dc8e8159409f66f2f9f918f249 362 PRINTS PR00987 Glutamyl-tRNA synthetase signature 28 39 1.3E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_19490 141192dc8e8159409f66f2f9f918f249 362 PRINTS PR00987 Glutamyl-tRNA synthetase signature 229 239 1.3E-13 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ambt_19670 f9736f753d6f7791c0b3d1dee53cdc9d 125 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 69 97 - T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ambt_19670 f9736f753d6f7791c0b3d1dee53cdc9d 125 Hamap MF_00422 Protein translocase subunit SecE [secE]. 64 119 12.973 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ambt_19670 f9736f753d6f7791c0b3d1dee53cdc9d 125 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 121 4.5E-17 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ambt_19670 f9736f753d6f7791c0b3d1dee53cdc9d 125 Gene3D G3DSA:1.20.5.1030 64 121 5.6E-16 T 13-10-2018 IPR038379 SecE superfamily ambt_19670 f9736f753d6f7791c0b3d1dee53cdc9d 125 PRINTS PR01650 Bacterial translocase SecE signature 42 63 3.7E-30 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ambt_19670 f9736f753d6f7791c0b3d1dee53cdc9d 125 PRINTS PR01650 Bacterial translocase SecE signature 107 123 3.7E-30 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ambt_19670 f9736f753d6f7791c0b3d1dee53cdc9d 125 PRINTS PR01650 Bacterial translocase SecE signature 87 107 3.7E-30 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ambt_19670 f9736f753d6f7791c0b3d1dee53cdc9d 125 PRINTS PR01650 Bacterial translocase SecE signature 63 83 3.7E-30 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ambt_19670 f9736f753d6f7791c0b3d1dee53cdc9d 125 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 68 119 4.2E-19 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ambt_20860 804e9aeda226cbdf3e183a72cbb7bfd0 620 Gene3D G3DSA:3.40.50.300 13 130 1.1E-7 T 13-10-2018 ambt_20860 804e9aeda226cbdf3e183a72cbb7bfd0 620 SUPERFAMILY SSF52540 7 306 1.69E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20860 804e9aeda226cbdf3e183a72cbb7bfd0 620 Pfam PF07693 KAP family P-loop domain 16 388 7.6E-67 T 13-10-2018 IPR011646 KAP family P-loop domain ambt_02470 1e411fa6c7d25de821470f475a625c7a 965 Pfam PF02347 Glycine cleavage system P-protein 465 739 3.9E-8 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ambt_02470 1e411fa6c7d25de821470f475a625c7a 965 Pfam PF02347 Glycine cleavage system P-protein 19 441 8.5E-181 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ambt_02470 1e411fa6c7d25de821470f475a625c7a 965 SUPERFAMILY SSF53383 20 442 1.85E-96 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_02470 1e411fa6c7d25de821470f475a625c7a 965 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 956 0.0 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ambt_02470 1e411fa6c7d25de821470f475a625c7a 965 Gene3D G3DSA:3.90.1150.10 770 908 9.3E-41 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_02470 1e411fa6c7d25de821470f475a625c7a 965 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 962 25.271 T 13-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ambt_02470 1e411fa6c7d25de821470f475a625c7a 965 SUPERFAMILY SSF53383 484 957 4.69E-96 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_02470 1e411fa6c7d25de821470f475a625c7a 965 Gene3D G3DSA:3.40.640.10 529 758 3.3E-60 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_02470 1e411fa6c7d25de821470f475a625c7a 965 Gene3D G3DSA:3.40.640.10 98 357 2.6E-103 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_16340 b340b1ce7e3dba33f490bafea30dfee9 292 Pfam PF00892 EamA-like transporter family 4 130 7.9E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_16340 b340b1ce7e3dba33f490bafea30dfee9 292 Pfam PF00892 EamA-like transporter family 144 274 5.5E-7 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_16340 b340b1ce7e3dba33f490bafea30dfee9 292 SUPERFAMILY SSF103481 36 133 9.55E-7 T 13-10-2018 ambt_02570 00151038b8bcd2108d76cd9a9a476576 211 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 185 209 0.0037 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain ambt_20435 6f5e5d5edac4f6b69ff5d797730b8d35 362 SMART SM00267 177 353 6.2E-48 T 13-10-2018 IPR000160 GGDEF domain ambt_20435 6f5e5d5edac4f6b69ff5d797730b8d35 362 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 185 351 1.8E-42 T 13-10-2018 IPR000160 GGDEF domain ambt_20435 6f5e5d5edac4f6b69ff5d797730b8d35 362 Pfam PF00990 Diguanylate cyclase, GGDEF domain 190 348 1.2E-39 T 13-10-2018 IPR000160 GGDEF domain ambt_20435 6f5e5d5edac4f6b69ff5d797730b8d35 362 Gene3D G3DSA:3.30.70.270 175 351 3.9E-49 T 13-10-2018 ambt_20435 6f5e5d5edac4f6b69ff5d797730b8d35 362 SUPERFAMILY SSF55073 193 351 2.12E-40 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_03970 557d0e2f94ac28dbe541c12e26ca56f7 372 PIRSF PIRSF004640 1 364 3.8E-147 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ambt_03970 557d0e2f94ac28dbe541c12e26ca56f7 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 4.9E-129 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ambt_03970 557d0e2f94ac28dbe541c12e26ca56f7 372 SUPERFAMILY SSF51604 40 139 5.3E-8 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ambt_03970 557d0e2f94ac28dbe541c12e26ca56f7 372 Pfam PF04551 GcpE protein 13 354 6.4E-134 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ambt_03970 557d0e2f94ac28dbe541c12e26ca56f7 372 Gene3D G3DSA:3.20.20.20 1 261 3.8E-107 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ambt_03970 557d0e2f94ac28dbe541c12e26ca56f7 372 SUPERFAMILY SSF56014 265 354 1.74E-13 T 13-10-2018 ambt_03970 557d0e2f94ac28dbe541c12e26ca56f7 372 Gene3D G3DSA:3.30.413.10 262 362 1.2E-24 T 13-10-2018 ambt_03970 557d0e2f94ac28dbe541c12e26ca56f7 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.135 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ambt_00160 ba9623bc4a382309b2f5ffd5deb0bc3f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.6E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_00160 ba9623bc4a382309b2f5ffd5deb0bc3f 299 SUPERFAMILY SSF53850 89 293 1.19E-44 T 13-10-2018 ambt_00160 ba9623bc4a382309b2f5ffd5deb0bc3f 299 Gene3D G3DSA:3.40.190.290 90 288 2.2E-65 T 13-10-2018 ambt_00160 ba9623bc4a382309b2f5ffd5deb0bc3f 299 SUPERFAMILY SSF46785 1 111 1.97E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_00160 ba9623bc4a382309b2f5ffd5deb0bc3f 299 Gene3D G3DSA:1.10.10.10 2 88 6.8E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_00160 ba9623bc4a382309b2f5ffd5deb0bc3f 299 Pfam PF03466 LysR substrate binding domain 88 288 9.9E-40 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_08150 9b1e130c0e82c9ad92bbef59e4ee517f 112 Pfam PF13936 Helix-turn-helix domain 2 45 2.4E-10 T 13-10-2018 IPR025246 Transposase IS30-like HTH domain ambt_20955 607317d065d662cfc56c6413434b2aa7 272 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 43 245 1.4E-47 T 13-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 ambt_20955 607317d065d662cfc56c6413434b2aa7 272 SUPERFAMILY SSF52833 157 235 7.27E-6 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_20955 607317d065d662cfc56c6413434b2aa7 272 Pfam PF00578 AhpC/TSA family 159 237 4.5E-5 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 SUPERFAMILY SSF55073 299 455 8.63E-39 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 SMART SM00267 283 457 2.4E-46 T 13-10-2018 IPR000160 GGDEF domain ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 SMART SM00091 130 205 1.3 T 13-10-2018 IPR000014 PAS domain ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 SMART SM00091 6 72 3.1 T 13-10-2018 IPR000014 PAS domain ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 134 256 4.7E-16 T 13-10-2018 IPR000014 PAS domain ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 Pfam PF13426 PAS domain 158 249 7.2E-19 T 13-10-2018 IPR000014 PAS domain ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 Gene3D G3DSA:3.30.70.270 293 464 2.5E-46 T 13-10-2018 ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 Gene3D G3DSA:3.30.450.20 131 292 5.5E-35 T 13-10-2018 ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 Pfam PF08448 PAS fold 14 126 2.0E-6 T 13-10-2018 IPR013656 PAS fold-4 ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 290 455 1.2E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 Pfam PF00990 Diguanylate cyclase, GGDEF domain 294 453 6.8E-40 T 13-10-2018 IPR000160 GGDEF domain ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 SMART SM00086 209 251 0.003 T 13-10-2018 IPR001610 PAC motif ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 SUPERFAMILY SSF55785 11 126 4.01E-8 T 13-10-2018 IPR035965 PAS domain superfamily ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 Gene3D G3DSA:3.30.450.20 2 130 1.9E-8 T 13-10-2018 ambt_01445 c4fdffd2f80a63696197fc95488929e9 468 SUPERFAMILY SSF55785 156 248 5.76E-21 T 13-10-2018 IPR035965 PAS domain superfamily ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 Gene3D G3DSA:3.40.50.11060 17 138 4.9E-39 T 13-10-2018 ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 SUPERFAMILY SSF52540 197 370 3.08E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 4.6E-28 T 13-10-2018 IPR032305 GTP-binding protein, middle domain ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 360 6.0E-157 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 PIRSF PIRSF006809 3 421 4.1E-150 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.276 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 3.9E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 Gene3D G3DSA:3.40.50.300 197 369 3.6E-38 T 13-10-2018 ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.7E-31 T 13-10-2018 IPR025121 GTPase HflX, N-terminal ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 SUPERFAMILY SSF54980 365 421 4.1E-15 T 13-10-2018 IPR035647 EF-G domain III/V-like ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 2.2E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 2.2E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_19855 a4942b8164012ef729ad90ce18a30ba0 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 2.2E-10 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 ambt_10145 87476ff62ef2f86a63347ede1409f936 231 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_10145 87476ff62ef2f86a63347ede1409f936 231 SUPERFAMILY SSF52540 5 228 2.47E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_10145 87476ff62ef2f86a63347ede1409f936 231 Pfam PF00005 ABC transporter 24 172 1.3E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_10145 87476ff62ef2f86a63347ede1409f936 231 Gene3D G3DSA:3.40.50.300 1 231 8.6E-71 T 13-10-2018 ambt_10145 87476ff62ef2f86a63347ede1409f936 231 SMART SM00382 33 221 1.1E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_10145 87476ff62ef2f86a63347ede1409f936 231 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 1.3E-100 T 13-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 ambt_09675 a685a6741e4c57d3f52a2f4cfc9af5ea 180 Gene3D G3DSA:3.30.70.1560 71 170 1.2E-39 T 13-10-2018 ambt_09675 a685a6741e4c57d3f52a2f4cfc9af5ea 180 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 42 56 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ambt_09675 a685a6741e4c57d3f52a2f4cfc9af5ea 180 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 11 177 5.9E-57 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ambt_09675 a685a6741e4c57d3f52a2f4cfc9af5ea 180 SUPERFAMILY SSF55120 6 176 2.4E-41 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_09675 a685a6741e4c57d3f52a2f4cfc9af5ea 180 Gene3D G3DSA:3.30.70.580 1 70 4.5E-28 T 13-10-2018 ambt_09675 a685a6741e4c57d3f52a2f4cfc9af5ea 180 Pfam PF00849 RNA pseudouridylate synthase 7 151 2.0E-16 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_16620 58a777b4c4d6f025d1da591298af5f77 404 Gene3D G3DSA:1.20.1250.20 3 195 1.2E-16 T 13-10-2018 ambt_16620 58a777b4c4d6f025d1da591298af5f77 404 Gene3D G3DSA:1.20.1250.20 203 404 3.9E-32 T 13-10-2018 ambt_16620 58a777b4c4d6f025d1da591298af5f77 404 SUPERFAMILY SSF103473 4 398 3.4E-38 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_16620 58a777b4c4d6f025d1da591298af5f77 404 Pfam PF03825 Nucleoside H+ symporter 2 398 4.7E-122 T 13-10-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 ambt_19405 0163509686e5822da43dd550f4aa4a74 324 Gene3D G3DSA:3.40.50.1820 1 317 3.1E-83 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_19405 0163509686e5822da43dd550f4aa4a74 324 PIRSF PIRSF006431 1 320 3.0E-108 T 13-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 ambt_19405 0163509686e5822da43dd550f4aa4a74 324 SUPERFAMILY SSF53474 11 300 9.54E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_19405 0163509686e5822da43dd550f4aa4a74 324 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 316 1.8E-98 T 13-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 ambt_19405 0163509686e5822da43dd550f4aa4a74 324 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.6E-12 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ambt_19405 0163509686e5822da43dd550f4aa4a74 324 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.6E-12 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ambt_19405 0163509686e5822da43dd550f4aa4a74 324 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.6E-12 T 13-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ambt_19405 0163509686e5822da43dd550f4aa4a74 324 Pfam PF00561 alpha/beta hydrolase fold 36 299 6.7E-25 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_15245 b25eb43162b3b1d5760bd660c849813c 322 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 319 4.3E-40 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_15245 b25eb43162b3b1d5760bd660c849813c 322 Gene3D G3DSA:3.30.930.10 1 322 9.0E-101 T 13-10-2018 ambt_15245 b25eb43162b3b1d5760bd660c849813c 322 PRINTS PR00982 Lysyl-tRNA synthetase signature 96 113 6.5E-5 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ambt_15245 b25eb43162b3b1d5760bd660c849813c 322 PRINTS PR00982 Lysyl-tRNA synthetase signature 28 38 6.5E-5 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ambt_15245 b25eb43162b3b1d5760bd660c849813c 322 SUPERFAMILY SSF55681 11 319 2.11E-74 T 13-10-2018 ambt_15245 b25eb43162b3b1d5760bd660c849813c 322 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 317 2.8E-119 T 13-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 Gene3D G3DSA:1.10.8.60 313 380 5.3E-26 T 13-10-2018 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 Gene3D G3DSA:3.40.50.300 127 312 3.5E-63 T 13-10-2018 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 409 426 7.0E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 446 7.0E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 SUPERFAMILY SSF52540 143 383 2.08E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 SUPERFAMILY SSF46689 355 445 8.96E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 Pfam PF02954 Bacterial regulatory protein, Fis family 402 443 4.7E-15 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 Gene3D G3DSA:3.40.50.2300 1 120 8.2E-26 T 13-10-2018 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 SMART SM00448 1 113 4.2E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 Gene3D G3DSA:1.10.10.60 381 449 1.1E-14 T 13-10-2018 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 Pfam PF00072 Response regulator receiver domain 1 113 1.1E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 SUPERFAMILY SSF52172 1 186 1.02E-30 T 13-10-2018 IPR011006 CheY-like superfamily ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 Pfam PF00158 Sigma-54 interaction domain 144 307 8.8E-63 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ambt_02660 3102e5f980bd820fb365cd772b1dee36 453 SMART SM00382 162 305 3.5E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_09390 c812af8110963d848e5e9ae09cf02ae5 476 SUPERFAMILY SSF52540 4 206 5.75E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_09390 c812af8110963d848e5e9ae09cf02ae5 476 Pfam PF00005 ABC transporter 274 426 7.3E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_09390 c812af8110963d848e5e9ae09cf02ae5 476 SUPERFAMILY SSF52540 248 473 1.78E-37 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_09390 c812af8110963d848e5e9ae09cf02ae5 476 Gene3D G3DSA:3.40.50.300 244 475 8.8E-43 T 13-10-2018 ambt_09390 c812af8110963d848e5e9ae09cf02ae5 476 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_09390 c812af8110963d848e5e9ae09cf02ae5 476 Pfam PF00005 ABC transporter 22 163 1.6E-13 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_09390 c812af8110963d848e5e9ae09cf02ae5 476 SMART SM00382 28 209 3.9E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_09390 c812af8110963d848e5e9ae09cf02ae5 476 SMART SM00382 282 472 0.022 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_09390 c812af8110963d848e5e9ae09cf02ae5 476 Gene3D G3DSA:3.40.50.300 2 230 1.4E-24 T 13-10-2018 ambt_15895 294e3c39468ea7027b4a7c58017bc75b 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ambt_15895 294e3c39468ea7027b4a7c58017bc75b 259 PIRSF PIRSF005902 1 259 9.5E-69 T 13-10-2018 IPR001130 TatD family GO:0016788 ambt_15895 294e3c39468ea7027b4a7c58017bc75b 259 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ambt_15895 294e3c39468ea7027b4a7c58017bc75b 259 Gene3D G3DSA:3.20.20.140 2 259 5.0E-82 T 13-10-2018 ambt_15895 294e3c39468ea7027b4a7c58017bc75b 259 SUPERFAMILY SSF51556 3 256 2.12E-76 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_15895 294e3c39468ea7027b4a7c58017bc75b 259 Pfam PF01026 TatD related DNase 4 255 1.2E-62 T 13-10-2018 IPR001130 TatD family GO:0016788 ambt_10215 5dc0372bc379673f6314681911015c08 901 Pfam PF13620 Carboxypeptidase regulatory-like domain 33 108 5.4E-13 T 13-10-2018 ambt_10215 5dc0372bc379673f6314681911015c08 901 Gene3D G3DSA:2.40.170.20 260 900 1.3E-53 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_10215 5dc0372bc379673f6314681911015c08 901 SUPERFAMILY SSF49452 26 107 9.22E-14 T 13-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 ambt_10215 5dc0372bc379673f6314681911015c08 901 Pfam PF07715 TonB-dependent Receptor Plug Domain 140 237 2.4E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_10215 5dc0372bc379673f6314681911015c08 901 Gene3D G3DSA:2.60.40.1120 32 109 5.1E-10 T 13-10-2018 ambt_10215 5dc0372bc379673f6314681911015c08 901 Gene3D G3DSA:2.170.130.10 111 242 2.0E-14 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_10215 5dc0372bc379673f6314681911015c08 901 Pfam PF00593 TonB dependent receptor 399 898 1.9E-40 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_10215 5dc0372bc379673f6314681911015c08 901 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 114 899 1.1E-167 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor ambt_10215 5dc0372bc379673f6314681911015c08 901 SUPERFAMILY SSF56935 113 899 1.67E-101 T 13-10-2018 ambt_15825 5941b05c984207750c3bdbace7b41e53 377 SUPERFAMILY SSF50952 33 376 7.59E-51 T 13-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ambt_15825 5941b05c984207750c3bdbace7b41e53 377 Pfam PF07995 Glucose / Sorbosone dehydrogenase 48 371 4.4E-132 T 13-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase ambt_15825 5941b05c984207750c3bdbace7b41e53 377 Gene3D G3DSA:2.120.10.30 32 376 2.0E-118 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_21005 bddec080516ed53c37509540af1a23e8 409 Pfam PF00589 Phage integrase family 244 375 2.2E-20 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_21005 bddec080516ed53c37509540af1a23e8 409 Gene3D G3DSA:1.10.443.10 220 394 2.4E-17 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_21005 bddec080516ed53c37509540af1a23e8 409 SUPERFAMILY SSF56349 101 386 1.62E-49 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_21005 bddec080516ed53c37509540af1a23e8 409 Gene3D G3DSA:1.10.150.130 100 209 6.2E-18 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_21005 bddec080516ed53c37509540af1a23e8 409 Pfam PF13356 Arm DNA-binding domain 3 89 4.3E-17 T 13-10-2018 IPR025166 Integrase, DNA-binding domain ambt_21005 bddec080516ed53c37509540af1a23e8 409 Gene3D G3DSA:3.30.160.390 1 99 1.1E-30 T 13-10-2018 IPR038488 Integrase, DNA-binding domain superfamily ambt_17440 fba15d462903170690b4c2e2f6aef3f5 460 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 452 1.7E-222 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 ambt_17440 fba15d462903170690b4c2e2f6aef3f5 460 Gene3D G3DSA:3.90.190.20 312 453 6.1E-27 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_17440 fba15d462903170690b4c2e2f6aef3f5 460 Pfam PF08245 Mur ligase middle domain 108 289 5.0E-22 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ambt_17440 fba15d462903170690b4c2e2f6aef3f5 460 Gene3D G3DSA:3.40.50.720 1 90 1.4E-33 T 13-10-2018 ambt_17440 fba15d462903170690b4c2e2f6aef3f5 460 Pfam PF01225 Mur ligase family, catalytic domain 2 95 1.7E-14 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ambt_17440 fba15d462903170690b4c2e2f6aef3f5 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 309 363 3.9E-8 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ambt_17440 fba15d462903170690b4c2e2f6aef3f5 460 SUPERFAMILY SSF53244 309 451 2.88E-37 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_17440 fba15d462903170690b4c2e2f6aef3f5 460 Gene3D G3DSA:3.40.1190.10 91 311 4.9E-56 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_17440 fba15d462903170690b4c2e2f6aef3f5 460 SUPERFAMILY SSF51984 1 90 2.75E-22 T 13-10-2018 ambt_17440 fba15d462903170690b4c2e2f6aef3f5 460 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 453 58.078 T 13-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 ambt_17440 fba15d462903170690b4c2e2f6aef3f5 460 SUPERFAMILY SSF53623 94 307 1.22E-50 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_01240 c701a54d5a58683e4deff61c73695d9d 290 SUPERFAMILY SSF161098 55 278 9.94E-47 T 13-10-2018 IPR035906 MetI-like superfamily ambt_01240 c701a54d5a58683e4deff61c73695d9d 290 Gene3D G3DSA:1.10.3720.10 49 287 1.8E-51 T 13-10-2018 IPR035906 MetI-like superfamily ambt_01240 c701a54d5a58683e4deff61c73695d9d 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 288 1.2E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 Gene3D G3DSA:3.30.70.1320 161 348 3.6E-245 T 13-10-2018 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 Gene3D G3DSA:3.30.70.1440 657 853 3.6E-245 T 13-10-2018 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 SUPERFAMILY SSF82866 311 509 2.35E-33 T 13-10-2018 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 Pfam PF00873 AcrB/AcrD/AcrF family 31 1016 7.8E-180 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 SUPERFAMILY SSF82714 708 792 1.05E-10 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 Gene3D G3DSA:1.20.1640.10 525 1013 3.6E-245 T 13-10-2018 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 SUPERFAMILY SSF82693 161 330 2.72E-10 T 13-10-2018 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 SUPERFAMILY SSF82693 67 161 1.57E-19 T 13-10-2018 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 Gene3D G3DSA:3.30.70.1430 67 803 3.6E-245 T 13-10-2018 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 SUPERFAMILY SSF82866 793 1021 8.76E-49 T 13-10-2018 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 SUPERFAMILY SSF82714 208 285 4.97E-11 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 Gene3D G3DSA:3.30.2090.10 204 290 3.6E-245 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 Gene3D G3DSA:1.20.1640.10 37 524 3.6E-245 T 13-10-2018 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 37 61 8.3E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 379 400 8.3E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 482 505 8.3E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 8.3E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 352 375 8.3E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 407 431 8.3E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 PRINTS PR00702 Acriflavin resistance protein family signature 65 83 8.3E-34 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 Gene3D G3DSA:3.30.2090.10 706 795 3.6E-245 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_09240 859aeb7dc6726cc0cf34a7dfd314563f 1040 Gene3D G3DSA:3.30.70.1430 571 656 3.6E-245 T 13-10-2018 ambt_08295 6c93ab51d8dac56f10f1570c4a3f621f 263 SMART SM00047 114 247 0.0067 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ambt_08295 6c93ab51d8dac56f10f1570c4a3f621f 263 Gene3D G3DSA:1.10.530.10 124 260 2.7E-12 T 13-10-2018 ambt_08295 6c93ab51d8dac56f10f1570c4a3f621f 263 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 127 257 5.5E-15 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ambt_08105 8c7a77fd87eba76e964431f01dca4b86 172 Gene3D G3DSA:3.10.129.10 2 172 3.5E-66 T 13-10-2018 ambt_08105 8c7a77fd87eba76e964431f01dca4b86 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 3.8E-93 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ambt_08105 8c7a77fd87eba76e964431f01dca4b86 172 Pfam PF07977 FabA-like domain 29 158 4.3E-52 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ambt_08105 8c7a77fd87eba76e964431f01dca4b86 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 52.255 T 13-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ambt_08105 8c7a77fd87eba76e964431f01dca4b86 172 SUPERFAMILY SSF54637 4 169 1.83E-57 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_16480 c4026e474ed875385d486ad325c3c5f6 438 Gene3D G3DSA:3.40.50.11720 49 227 9.6E-39 T 13-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 ambt_16480 c4026e474ed875385d486ad325c3c5f6 438 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 52 229 2.7E-56 T 13-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 ambt_16480 c4026e474ed875385d486ad325c3c5f6 438 Gene3D G3DSA:3.40.50.2000 240 421 1.6E-55 T 13-10-2018 ambt_16480 c4026e474ed875385d486ad325c3c5f6 438 SUPERFAMILY SSF53756 76 423 6.8E-11 T 13-10-2018 ambt_14825 f074d2985e3c76cccbd5c41c9bf8b86f 149 Gene3D G3DSA:2.60.120.1140 27 149 7.6E-37 T 13-10-2018 IPR038695 Saro_0823-like superfamily ambt_14825 f074d2985e3c76cccbd5c41c9bf8b86f 149 Pfam PF02643 Uncharacterized ACR, COG1430 45 147 4.2E-32 T 13-10-2018 IPR003795 Protein of unknown function DUF192 ambt_11785 ba419be30716d471be277c6c5f5bc839 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 67 5.7E-31 T 13-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor ambt_11785 ba419be30716d471be277c6c5f5bc839 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 9.0E-21 T 13-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor ambt_02860 a2a974c3d3bf599ecd8d3cd3c42e78e9 237 SUPERFAMILY SSF53474 3 234 1.16E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_02860 a2a974c3d3bf599ecd8d3cd3c42e78e9 237 Pfam PF12697 Alpha/beta hydrolase family 3 223 2.5E-13 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_02860 a2a974c3d3bf599ecd8d3cd3c42e78e9 237 Gene3D G3DSA:3.40.50.1820 1 233 4.9E-40 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_12675 db6228840bcbd32b57656558cff387ba 197 Gene3D G3DSA:3.30.1370.110 66 191 1.5E-26 T 13-10-2018 ambt_12675 db6228840bcbd32b57656558cff387ba 197 SMART SM00463 111 189 1.7E-9 T 13-10-2018 IPR002625 Smr domain ambt_12675 db6228840bcbd32b57656558cff387ba 197 Pfam PF01713 Smr domain 114 188 4.7E-17 T 13-10-2018 IPR002625 Smr domain ambt_12675 db6228840bcbd32b57656558cff387ba 197 SUPERFAMILY SSF160443 112 188 1.96E-10 T 13-10-2018 IPR036063 Smr domain superfamily ambt_19540 fe0a53886623346e514c675876193e81 229 Pfam PF00072 Response regulator receiver domain 5 116 2.5E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_19540 fe0a53886623346e514c675876193e81 229 Gene3D G3DSA:3.40.50.2300 1 122 6.2E-27 T 13-10-2018 ambt_19540 fe0a53886623346e514c675876193e81 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 226 1.1E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_19540 fe0a53886623346e514c675876193e81 229 Gene3D G3DSA:1.10.10.10 123 229 4.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_19540 fe0a53886623346e514c675876193e81 229 SMART SM00448 3 116 3.5E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_19540 fe0a53886623346e514c675876193e81 229 TIGRFAM TIGR03787 marine_sort_RR: proteobacterial dedicated sortase system response regulator 3 228 3.8E-118 T 13-10-2018 IPR022305 Sortase system response regulator ambt_19540 fe0a53886623346e514c675876193e81 229 SUPERFAMILY SSF52172 2 136 1.85E-29 T 13-10-2018 IPR011006 CheY-like superfamily ambt_19540 fe0a53886623346e514c675876193e81 229 SMART SM00862 154 227 2.1E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_19540 fe0a53886623346e514c675876193e81 229 SUPERFAMILY SSF46894 136 227 6.52E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_06535 5e669cdb35c5245961016b7ddd422de5 224 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 207 6.6E-21 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ambt_06535 5e669cdb35c5245961016b7ddd422de5 224 SUPERFAMILY SSF53254 1 213 1.1E-36 T 13-10-2018 IPR029033 Histidine phosphatase superfamily ambt_06535 5e669cdb35c5245961016b7ddd422de5 224 SMART SM00855 3 167 5.1E-7 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ambt_06535 5e669cdb35c5245961016b7ddd422de5 224 Gene3D G3DSA:3.40.50.1240 1 217 1.1E-31 T 13-10-2018 IPR029033 Histidine phosphatase superfamily ambt_12545 ac7139809ec816845d887ea05cd17f1f 297 SUPERFAMILY SSF53474 37 296 7.3E-46 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_12545 ac7139809ec816845d887ea05cd17f1f 297 Pfam PF00561 alpha/beta hydrolase fold 57 186 9.6E-20 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_12545 ac7139809ec816845d887ea05cd17f1f 297 Gene3D G3DSA:3.40.50.1820 14 297 2.8E-53 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_12545 ac7139809ec816845d887ea05cd17f1f 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 127 140 1.9E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_12545 ac7139809ec816845d887ea05cd17f1f 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 97 1.9E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_12545 ac7139809ec816845d887ea05cd17f1f 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 141 154 1.9E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_12545 ac7139809ec816845d887ea05cd17f1f 297 PRINTS PR00111 Alpha/beta hydrolase fold signature 241 255 1.9E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_05390 d3cf219145eb668a6627aa343328023f 381 SUPERFAMILY SSF53098 30 168 8.6E-7 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_05390 d3cf219145eb668a6627aa343328023f 381 Pfam PF00665 Integrase core domain 5 135 1.8E-17 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_17010 d3cf219145eb668a6627aa343328023f 381 SUPERFAMILY SSF53098 30 168 8.6E-7 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_17010 d3cf219145eb668a6627aa343328023f 381 Pfam PF00665 Integrase core domain 5 135 1.8E-17 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_04950 deed00ea039b6e9bb552d08624852153 429 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 322 421 2.5E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_04950 deed00ea039b6e9bb552d08624852153 429 Gene3D G3DSA:3.30.565.10 272 424 8.6E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_04950 deed00ea039b6e9bb552d08624852153 429 SUPERFAMILY SSF47384 194 271 2.35E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_04950 deed00ea039b6e9bb552d08624852153 429 SUPERFAMILY SSF55874 262 423 2.75E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_04950 deed00ea039b6e9bb552d08624852153 429 SMART SM00388 210 273 9.2E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_04950 deed00ea039b6e9bb552d08624852153 429 Gene3D G3DSA:1.10.287.130 161 271 3.4E-20 T 13-10-2018 ambt_04950 deed00ea039b6e9bb552d08624852153 429 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 269 4.1E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_04950 deed00ea039b6e9bb552d08624852153 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 4.4E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_04950 deed00ea039b6e9bb552d08624852153 429 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 4.4E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_04950 deed00ea039b6e9bb552d08624852153 429 SMART SM00387 317 427 7.2E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_03190 884066d71d4813ce6792db95ea52dc37 562 SUPERFAMILY SSF56645 83 307 2.09E-33 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ambt_03190 884066d71d4813ce6792db95ea52dc37 562 Gene3D G3DSA:1.20.140.10 299 455 1.0E-34 T 13-10-2018 ambt_03190 884066d71d4813ce6792db95ea52dc37 562 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 298 453 8.3E-29 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ambt_03190 884066d71d4813ce6792db95ea52dc37 562 SUPERFAMILY SSF47203 303 457 3.7E-39 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ambt_03190 884066d71d4813ce6792db95ea52dc37 562 Gene3D G3DSA:2.40.110.20 144 298 4.1E-55 T 13-10-2018 ambt_03190 884066d71d4813ce6792db95ea52dc37 562 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 194 287 1.5E-13 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ambt_08230 f9f4c37b79f1925c3f894339b665334b 477 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 10 465 1.8E-228 T 13-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 ambt_08230 f9f4c37b79f1925c3f894339b665334b 477 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_08230 f9f4c37b79f1925c3f894339b665334b 477 Gene3D G3DSA:1.20.210.10 4 473 6.8E-205 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_08230 f9f4c37b79f1925c3f894339b665334b 477 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 14 444 4.3E-114 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_08230 f9f4c37b79f1925c3f894339b665334b 477 SUPERFAMILY SSF81442 11 465 3.66E-122 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 SUPERFAMILY SSF53098 2 210 1.52E-65 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 SUPERFAMILY SSF47819 193 289 4.8E-25 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 SMART SM00474 3 171 4.8E-40 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 TIGRFAM TIGR01388 rnd: ribonuclease D 6 379 7.9E-117 T 13-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 Pfam PF00570 HRDC domain 213 280 8.4E-17 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 Gene3D G3DSA:1.10.150.80 195 292 1.3E-21 T 13-10-2018 ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 SUPERFAMILY SSF47819 301 382 2.62E-18 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 Hamap MF_01899 Ribonuclease D [rnd]. 3 380 40.99 T 13-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 Gene3D G3DSA:1.10.150.80 299 384 9.0E-27 T 13-10-2018 ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 Pfam PF01612 3'-5' exonuclease 3 170 4.2E-36 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 Gene3D G3DSA:3.30.420.10 1 194 5.3E-65 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_04765 5e0f176f63dd1d4d97d53357f2abebfb 385 SMART SM00341 210 290 6.1E-14 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ambt_18755 c87bef3581fe03796633ca401bfad872 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site ambt_18755 c87bef3581fe03796633ca401bfad872 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 8.9E-69 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 ambt_18755 c87bef3581fe03796633ca401bfad872 225 Pfam PF04002 RadC-like JAB domain 104 222 2.5E-43 T 13-10-2018 IPR025657 RadC-like JAB domain ambt_18755 c87bef3581fe03796633ca401bfad872 225 SUPERFAMILY SSF47781 17 87 2.59E-7 T 13-10-2018 IPR010994 RuvA domain 2-like ambt_18755 c87bef3581fe03796633ca401bfad872 225 SUPERFAMILY SSF102712 146 199 1.31E-5 T 13-10-2018 ambt_18755 c87bef3581fe03796633ca401bfad872 225 Gene3D G3DSA:3.40.140.10 101 224 4.0E-42 T 13-10-2018 ambt_16750 a781ecfeff693efa3a1e5f72652c967c 121 Pfam PF00072 Response regulator receiver domain 5 115 5.9E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_16750 a781ecfeff693efa3a1e5f72652c967c 121 SMART SM00448 3 116 3.1E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_16750 a781ecfeff693efa3a1e5f72652c967c 121 SUPERFAMILY SSF52172 3 120 5.69E-38 T 13-10-2018 IPR011006 CheY-like superfamily ambt_16750 a781ecfeff693efa3a1e5f72652c967c 121 Gene3D G3DSA:3.40.50.12740 1 121 1.1E-38 T 13-10-2018 ambt_12090 83580f76fbb0ce978ec26cab1ac535b7 451 SUPERFAMILY SSF52964 28 179 8.89E-40 T 13-10-2018 ambt_12090 83580f76fbb0ce978ec26cab1ac535b7 451 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 4 446 49.207 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 ambt_12090 83580f76fbb0ce978ec26cab1ac535b7 451 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 14 447 6.1E-158 T 13-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 ambt_12090 83580f76fbb0ce978ec26cab1ac535b7 451 Pfam PF04052 TolB amino-terminal domain 23 125 3.3E-32 T 13-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 ambt_12090 83580f76fbb0ce978ec26cab1ac535b7 451 SUPERFAMILY SSF69304 172 448 1.83E-58 T 13-10-2018 ambt_12090 83580f76fbb0ce978ec26cab1ac535b7 451 Gene3D G3DSA:3.40.50.10070 22 181 2.2E-47 T 13-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 ambt_12090 83580f76fbb0ce978ec26cab1ac535b7 451 Gene3D G3DSA:2.120.10.30 183 450 2.0E-94 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_12090 83580f76fbb0ce978ec26cab1ac535b7 451 Pfam PF07676 WD40-like Beta Propeller Repeat 213 248 2.0E-8 T 13-10-2018 IPR011659 WD40-like Beta Propeller ambt_12090 83580f76fbb0ce978ec26cab1ac535b7 451 Pfam PF07676 WD40-like Beta Propeller Repeat 300 335 3.8E-10 T 13-10-2018 IPR011659 WD40-like Beta Propeller ambt_12090 83580f76fbb0ce978ec26cab1ac535b7 451 Pfam PF07676 WD40-like Beta Propeller Repeat 388 412 0.08 T 13-10-2018 IPR011659 WD40-like Beta Propeller ambt_12090 83580f76fbb0ce978ec26cab1ac535b7 451 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 8.5E-10 T 13-10-2018 IPR011659 WD40-like Beta Propeller ambt_12670 9a7904d4925077f6a9946d523d0d285e 311 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 71 271 9.3E-61 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ambt_12670 9a7904d4925077f6a9946d523d0d285e 311 Gene3D G3DSA:1.10.8.10 16 111 2.3E-7 T 13-10-2018 ambt_12670 9a7904d4925077f6a9946d523d0d285e 311 Gene3D G3DSA:3.40.50.150 114 278 1.2E-47 T 13-10-2018 ambt_12670 9a7904d4925077f6a9946d523d0d285e 311 PIRSF PIRSF037167 1 311 1.5E-134 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 ambt_12670 9a7904d4925077f6a9946d523d0d285e 311 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 209 215 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ambt_12670 9a7904d4925077f6a9946d523d0d285e 311 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 14 299 1.4E-127 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 ambt_12670 9a7904d4925077f6a9946d523d0d285e 311 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 7 305 50.019 T 13-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 ambt_12670 9a7904d4925077f6a9946d523d0d285e 311 Pfam PF05175 Methyltransferase small domain 137 220 3.2E-17 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ambt_12670 9a7904d4925077f6a9946d523d0d285e 311 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 297 1.2E-87 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ambt_12670 9a7904d4925077f6a9946d523d0d285e 311 SUPERFAMILY SSF53335 26 271 9.36E-49 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_18640 f92500d2d1060ca54292a2abf85409b5 298 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 20 295 2.5E-102 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 ambt_18640 f92500d2d1060ca54292a2abf85409b5 298 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 13 296 29.26 T 13-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 ambt_18640 f92500d2d1060ca54292a2abf85409b5 298 Pfam PF01040 UbiA prenyltransferase family 36 277 1.8E-63 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 ambt_18640 f92500d2d1060ca54292a2abf85409b5 298 Gene3D G3DSA:1.10.357.140 33 177 1.7E-42 T 13-10-2018 ambt_18640 f92500d2d1060ca54292a2abf85409b5 298 Gene3D G3DSA:1.20.120.1780 178 297 4.1E-11 T 13-10-2018 ambt_17345 96adf22a58e079a73afbbc45ea381f8a 447 SUPERFAMILY SSF48452 137 275 2.47E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_17345 96adf22a58e079a73afbbc45ea381f8a 447 Gene3D G3DSA:1.25.40.10 132 293 2.3E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_07995 3327ce4e5ab33fb8546aeefec325f75b 172 Gene3D G3DSA:2.160.10.10 2 172 3.2E-60 T 13-10-2018 ambt_07995 3327ce4e5ab33fb8546aeefec325f75b 172 SUPERFAMILY SSF51161 7 168 1.8E-45 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_07995 3327ce4e5ab33fb8546aeefec325f75b 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 121 1.2E-9 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_02865 262fca12bec1ec8b8fdd94db98027270 244 Gene3D G3DSA:3.40.30.10 6 84 9.8E-11 T 13-10-2018 ambt_02865 262fca12bec1ec8b8fdd94db98027270 244 SUPERFAMILY SSF52833 4 81 1.24E-14 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_02865 262fca12bec1ec8b8fdd94db98027270 244 Pfam PF00462 Glutaredoxin 17 67 1.3E-5 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ambt_21810 2dee2fb4f80d4457ccbb5f71576d691f 661 SUPERFAMILY SSF53474 412 659 2.57E-64 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_21810 2dee2fb4f80d4457ccbb5f71576d691f 661 Pfam PF00326 Prolyl oligopeptidase family 454 660 7.0E-40 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ambt_21810 2dee2fb4f80d4457ccbb5f71576d691f 661 Gene3D G3DSA:3.40.50.1820 389 661 4.6E-67 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_21810 2dee2fb4f80d4457ccbb5f71576d691f 661 SUPERFAMILY SSF82171 56 400 1.2E-14 T 13-10-2018 ambt_13495 50185c61beffa5915b727fd6e1ff46c4 458 Gene3D G3DSA:2.60.98.20 157 339 2.4E-19 T 13-10-2018 IPR037058 Flagellar hook protein FlgE superfamily ambt_13495 50185c61beffa5915b727fd6e1ff46c4 458 Pfam PF07559 Flagellar basal body protein FlaE 182 338 1.1E-26 T 13-10-2018 IPR011491 Flagellar hook protein FlgE ambt_13495 50185c61beffa5915b727fd6e1ff46c4 458 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 440 1.4E-93 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ambt_13495 50185c61beffa5915b727fd6e1ff46c4 458 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 393 457 2.3E-12 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ambt_13495 50185c61beffa5915b727fd6e1ff46c4 458 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ambt_13495 50185c61beffa5915b727fd6e1ff46c4 458 Pfam PF00460 Flagella basal body rod protein 3 33 8.7E-11 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ambt_13495 50185c61beffa5915b727fd6e1ff46c4 458 SUPERFAMILY SSF117143 80 418 4.71E-69 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ambt_01660 2658caa8effd8a9de02de2a30b564b88 237 Pfam PF01048 Phosphorylase superfamily 8 233 3.8E-52 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ambt_01660 2658caa8effd8a9de02de2a30b564b88 237 Gene3D G3DSA:3.40.50.1580 6 237 2.0E-69 T 13-10-2018 ambt_01660 2658caa8effd8a9de02de2a30b564b88 237 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 8 235 2.0E-85 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ambt_01660 2658caa8effd8a9de02de2a30b564b88 237 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 8 236 43.777 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ambt_01660 2658caa8effd8a9de02de2a30b564b88 237 SUPERFAMILY SSF53167 3 236 2.36E-71 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ambt_18745 6a94124962b01858c227366346cae4c8 227 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 18 215 3.3E-45 T 13-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB ambt_18745 6a94124962b01858c227366346cae4c8 227 Gene3D G3DSA:2.40.360.10 21 223 1.0E-42 T 13-10-2018 IPR023373 YmcC-like superfamily ambt_18745 6a94124962b01858c227366346cae4c8 227 SUPERFAMILY SSF159270 24 218 3.4E-36 T 13-10-2018 IPR023373 YmcC-like superfamily ambt_20235 404301a5de0c15f62b0e4a8c4edc6f4a 131 Gene3D G3DSA:3.90.1150.30 1 130 3.5E-5 T 13-10-2018 IPR038056 YjbR-like superfamily ambt_20235 404301a5de0c15f62b0e4a8c4edc6f4a 131 Pfam PF04237 YjbR 13 115 8.9E-10 T 13-10-2018 IPR007351 Uncharacterised protein YjbR ambt_20235 404301a5de0c15f62b0e4a8c4edc6f4a 131 SUPERFAMILY SSF142906 2 130 8.24E-23 T 13-10-2018 IPR038056 YjbR-like superfamily ambt_16510 ab842fc8105e50150963e04b4a91e30b 234 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16510 ab842fc8105e50150963e04b4a91e30b 234 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.01 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ambt_16510 ab842fc8105e50150963e04b4a91e30b 234 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.4E-97 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ambt_16510 ab842fc8105e50150963e04b4a91e30b 234 SUPERFAMILY SSF54814 2 106 2.04E-37 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ambt_16510 ab842fc8105e50150963e04b4a91e30b 234 SMART SM00322 60 125 7.6E-7 T 13-10-2018 IPR004087 K Homology domain GO:0003676 ambt_16510 ab842fc8105e50150963e04b4a91e30b 234 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 3.2E-41 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16510 ab842fc8105e50150963e04b4a91e30b 234 Gene3D G3DSA:3.30.300.20 17 107 2.8E-29 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta ambt_16510 ab842fc8105e50150963e04b4a91e30b 234 Pfam PF07650 KH domain 39 111 3.2E-18 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16510 ab842fc8105e50150963e04b4a91e30b 234 Gene3D G3DSA:3.30.1140.32 108 208 1.1E-44 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16510 ab842fc8105e50150963e04b4a91e30b 234 SUPERFAMILY SSF54821 108 206 6.41E-40 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_04105 1a794c6e67b0fc2bf4b47049c75846e0 301 Gene3D G3DSA:1.20.1530.20 2 289 1.7E-72 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily ambt_04105 1a794c6e67b0fc2bf4b47049c75846e0 301 Pfam PF01758 Sodium Bile acid symporter family 12 196 1.9E-31 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ambt_10070 7ceebba0add74ce70fbcae10d87f269c 223 SUPERFAMILY SSF47616 88 213 8.35E-24 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_10070 7ceebba0add74ce70fbcae10d87f269c 223 Pfam PF02798 Glutathione S-transferase, N-terminal domain 17 90 4.8E-12 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_10070 7ceebba0add74ce70fbcae10d87f269c 223 Pfam PF00043 Glutathione S-transferase, C-terminal domain 143 206 2.3E-8 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_10070 7ceebba0add74ce70fbcae10d87f269c 223 Gene3D G3DSA:3.40.30.10 2 95 6.3E-22 T 13-10-2018 ambt_10070 7ceebba0add74ce70fbcae10d87f269c 223 SUPERFAMILY SSF52833 12 94 2.28E-20 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_10070 7ceebba0add74ce70fbcae10d87f269c 223 Gene3D G3DSA:1.20.1050.10 102 211 4.8E-22 T 13-10-2018 ambt_11690 55b00fc0c63466e20a1910df652be992 224 SUPERFAMILY SSF52172 1 175 1.41E-40 T 13-10-2018 IPR011006 CheY-like superfamily ambt_11690 55b00fc0c63466e20a1910df652be992 224 Gene3D G3DSA:1.10.10.10 122 223 2.4E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_11690 55b00fc0c63466e20a1910df652be992 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 9.8E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_11690 55b00fc0c63466e20a1910df652be992 224 Gene3D G3DSA:3.40.50.2300 1 121 1.5E-41 T 13-10-2018 ambt_11690 55b00fc0c63466e20a1910df652be992 224 Pfam PF00072 Response regulator receiver domain 3 113 3.8E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_11690 55b00fc0c63466e20a1910df652be992 224 SMART SM00862 145 220 1.2E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_11690 55b00fc0c63466e20a1910df652be992 224 SMART SM00448 1 112 3.0E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_13410 7a1829586a4e612d2bd9a3ef39bf9337 1116 Pfam PF01973 Protein of unknown function DUF115 516 679 4.7E-26 T 13-10-2018 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like ambt_11280 9b3f5f905d40f94d68e691190cde5e65 853 SUPERFAMILY SSF47336 417 462 1.7E-5 T 13-10-2018 IPR036736 ACP-like superfamily ambt_11280 9b3f5f905d40f94d68e691190cde5e65 853 Gene3D G3DSA:3.40.50.12780 16 299 4.4E-35 T 13-10-2018 ambt_11280 9b3f5f905d40f94d68e691190cde5e65 853 SUPERFAMILY SSF56801 53 397 1.57E-49 T 13-10-2018 ambt_11280 9b3f5f905d40f94d68e691190cde5e65 853 Pfam PF00501 AMP-binding enzyme 59 303 7.2E-33 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ambt_11280 9b3f5f905d40f94d68e691190cde5e65 853 Gene3D G3DSA:1.10.1200.10 407 489 3.6E-5 T 13-10-2018 IPR036736 ACP-like superfamily ambt_11280 9b3f5f905d40f94d68e691190cde5e65 853 Gene3D G3DSA:3.30.300.30 300 403 2.9E-9 T 13-10-2018 ambt_11280 9b3f5f905d40f94d68e691190cde5e65 853 ProSitePatterns PS00455 Putative AMP-binding domain signature. 70 81 - T 13-10-2018 IPR020845 AMP-binding, conserved site ambt_11280 9b3f5f905d40f94d68e691190cde5e65 853 ProSitePatterns PS00012 Phosphopantetheine attachment site. 443 458 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site ambt_04030 2c4b9072b1e7299508372e726217abd2 281 Pfam PF12706 Beta-lactamase superfamily domain 39 234 3.3E-15 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_04030 2c4b9072b1e7299508372e726217abd2 281 Gene3D G3DSA:3.60.15.10 2 275 3.6E-38 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_04030 2c4b9072b1e7299508372e726217abd2 281 SUPERFAMILY SSF56281 1 254 2.23E-38 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 SMART SM00388 358 423 7.1E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 Pfam PF00512 His Kinase A (phospho-acceptor) domain 358 423 6.0E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 Pfam PF02743 Cache domain 43 240 1.1E-12 T 13-10-2018 IPR033479 Double Cache domain 1 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 Gene3D G3DSA:1.10.287.130 332 421 1.4E-18 T 13-10-2018 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 SMART SM00387 470 586 6.7E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 Gene3D G3DSA:3.40.50.12740 739 860 1.9E-40 T 13-10-2018 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 SMART SM00448 740 854 5.9E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 Gene3D G3DSA:3.30.450.20 77 205 3.1E-30 T 13-10-2018 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 585 6.2E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 SUPERFAMILY SSF103190 43 205 2.9E-33 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 Pfam PF00072 Response regulator receiver domain 742 854 4.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 SUPERFAMILY SSF52172 741 857 9.39E-35 T 13-10-2018 IPR011006 CheY-like superfamily ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 5.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 5.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 5.6E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 Gene3D G3DSA:3.30.565.10 422 589 8.9E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 SUPERFAMILY SSF47384 347 424 7.26E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_18555 45348af2106ae724496cc2c5c7f9d81d 861 SUPERFAMILY SSF55874 412 581 1.83E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_12405 502d65d8d6bac97239c7086a09e64b62 234 Pfam PF11859 Protein of unknown function (DUF3379) 1 230 6.8E-85 T 13-10-2018 IPR021806 Protein of unknown function DUF3379 ambt_10225 59a5367cdf361be7e9f83e82d2a915be 757 Gene3D G3DSA:2.120.10.30 57 298 6.0E-6 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_10225 59a5367cdf361be7e9f83e82d2a915be 757 SUPERFAMILY SSF50956 418 750 1.19E-62 T 13-10-2018 ambt_10225 59a5367cdf361be7e9f83e82d2a915be 757 Pfam PF02333 Phytase 415 748 2.1E-58 T 13-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 ambt_10225 59a5367cdf361be7e9f83e82d2a915be 757 Gene3D G3DSA:2.120.10.30 415 757 6.1E-110 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_10225 59a5367cdf361be7e9f83e82d2a915be 757 SUPERFAMILY SSF50956 113 288 7.98E-6 T 13-10-2018 ambt_13790 fcccc93ea5491d58967f8602c29a76c3 185 Pfam PF07348 Syd protein (SUKH-2) 7 183 2.6E-62 T 13-10-2018 IPR009948 Syd GO:0009898 ambt_13790 fcccc93ea5491d58967f8602c29a76c3 185 Hamap MF_01104 Protein Syd [syd]. 3 185 29.913 T 13-10-2018 IPR009948 Syd GO:0009898 ambt_13790 fcccc93ea5491d58967f8602c29a76c3 185 Gene3D G3DSA:3.40.1580.20 1 185 2.0E-63 T 13-10-2018 IPR038228 Syd superfamily ambt_03855 309e2eb8e8278c54e56f13402e8bc636 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ambt_03855 309e2eb8e8278c54e56f13402e8bc636 274 Gene3D G3DSA:1.10.3130.10 1 66 1.3E-22 T 13-10-2018 ambt_03855 309e2eb8e8278c54e56f13402e8bc636 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 8.7E-5 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_03855 309e2eb8e8278c54e56f13402e8bc636 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 150 1.6E-6 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_03855 309e2eb8e8278c54e56f13402e8bc636 274 SUPERFAMILY SSF51161 4 168 1.39E-53 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_03855 309e2eb8e8278c54e56f13402e8bc636 274 Gene3D G3DSA:2.160.10.10 67 192 1.4E-34 T 13-10-2018 ambt_03855 309e2eb8e8278c54e56f13402e8bc636 274 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 166 2.1E-77 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ambt_14005 04ab6ec8b5f607a429936e6cf82d99b1 365 SMART SM01329 5 357 9.1E-194 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ambt_14005 04ab6ec8b5f607a429936e6cf82d99b1 365 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 355 7.3E-152 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 ambt_14005 04ab6ec8b5f607a429936e6cf82d99b1 365 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 246 265 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 ambt_14005 04ab6ec8b5f607a429936e6cf82d99b1 365 Gene3D G3DSA:3.40.718.10 1 364 2.2E-152 T 13-10-2018 ambt_14005 04ab6ec8b5f607a429936e6cf82d99b1 365 SUPERFAMILY SSF53659 3 361 1.33E-118 T 13-10-2018 ambt_14005 04ab6ec8b5f607a429936e6cf82d99b1 365 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 357 2.8E-128 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ambt_14005 04ab6ec8b5f607a429936e6cf82d99b1 365 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 4 361 48.926 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 ambt_10825 cb086a4ebddbb7b27dc2368edcd43823 308 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 8 302 1.8E-156 T 13-10-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 ambt_10825 cb086a4ebddbb7b27dc2368edcd43823 308 Pfam PF01522 Polysaccharide deacetylase 78 166 3.6E-13 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ambt_10825 cb086a4ebddbb7b27dc2368edcd43823 308 SUPERFAMILY SSF88713 8 303 4.73E-93 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ambt_10825 cb086a4ebddbb7b27dc2368edcd43823 308 Gene3D G3DSA:3.20.20.370 2 307 1.9E-104 T 13-10-2018 ambt_09215 b35c66148b81255a04e2c590b92876e1 242 Pfam PF03746 LamB/YcsF family 2 241 4.7E-90 T 13-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 ambt_09215 b35c66148b81255a04e2c590b92876e1 242 SUPERFAMILY SSF88713 1 241 9.64E-87 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ambt_09215 b35c66148b81255a04e2c590b92876e1 242 Gene3D G3DSA:3.20.20.370 1 242 1.1E-92 T 13-10-2018 ambt_04370 a9714264e4a9eb7cc9ab7db78430c281 157 Gene3D G3DSA:3.40.50.960 1 156 3.7E-64 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_04370 a9714264e4a9eb7cc9ab7db78430c281 157 SUPERFAMILY SSF52121 4 153 5.89E-61 T 13-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_04370 a9714264e4a9eb7cc9ab7db78430c281 157 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 7.1E-59 T 13-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_04370 a9714264e4a9eb7cc9ab7db78430c281 157 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.86 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_04370 a9714264e4a9eb7cc9ab7db78430c281 157 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.3E-56 T 13-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_11675 a34e946aa8c385f257a9e6be244fa15a 99 Gene3D G3DSA:3.30.70.1060 1 98 9.4E-37 T 13-10-2018 ambt_11675 a34e946aa8c385f257a9e6be244fa15a 99 SUPERFAMILY SSF54909 1 97 3.75E-31 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel ambt_11675 a34e946aa8c385f257a9e6be244fa15a 99 Pfam PF03795 YCII-related domain 1 94 1.2E-28 T 13-10-2018 IPR005545 YCII-related ambt_11795 88f60343bfaa4cf5647469bb1b777fa4 447 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 4 446 1.4E-214 T 13-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ambt_11795 88f60343bfaa4cf5647469bb1b777fa4 447 Pfam PF01474 Class-II DAHP synthetase family 4 441 8.6E-206 T 13-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ambt_11795 88f60343bfaa4cf5647469bb1b777fa4 447 SUPERFAMILY SSF51569 3 445 3.88E-200 T 13-10-2018 ambt_12565 eaf3ff61e0a2da7350c2e205dfb8b476 555 SUPERFAMILY SSF55073 408 550 1.02E-24 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_12565 eaf3ff61e0a2da7350c2e205dfb8b476 555 Pfam PF07695 7TM diverse intracellular signalling 193 377 8.3E-14 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 ambt_12565 eaf3ff61e0a2da7350c2e205dfb8b476 555 Gene3D G3DSA:3.30.70.270 390 553 1.4E-29 T 13-10-2018 ambt_12565 eaf3ff61e0a2da7350c2e205dfb8b476 555 SMART SM00267 392 555 1.6E-19 T 13-10-2018 IPR000160 GGDEF domain ambt_12565 eaf3ff61e0a2da7350c2e205dfb8b476 555 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 402 550 2.6E-23 T 13-10-2018 IPR000160 GGDEF domain ambt_12565 eaf3ff61e0a2da7350c2e205dfb8b476 555 Pfam PF00990 Diguanylate cyclase, GGDEF domain 404 550 3.0E-24 T 13-10-2018 IPR000160 GGDEF domain ambt_16630 77ad239ac17e09a82c9bf95a8c6538b5 412 SUPERFAMILY SSF51735 27 192 2.96E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_16630 77ad239ac17e09a82c9bf95a8c6538b5 412 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 29 159 5.5E-18 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ambt_16630 77ad239ac17e09a82c9bf95a8c6538b5 412 Gene3D G3DSA:3.40.50.720 34 379 5.9E-119 T 13-10-2018 ambt_16630 77ad239ac17e09a82c9bf95a8c6538b5 412 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 173 279 8.8E-5 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ambt_16630 77ad239ac17e09a82c9bf95a8c6538b5 412 Gene3D G3DSA:3.30.360.10 166 403 5.9E-119 T 13-10-2018 ambt_16630 77ad239ac17e09a82c9bf95a8c6538b5 412 SUPERFAMILY SSF55347 167 341 9.16E-33 T 13-10-2018 ambt_11075 0e1e8af9a8f37d2d0fb8dce62f631dd9 243 Gene3D G3DSA:1.10.1220.10 1 38 5.3E-22 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 ambt_11075 0e1e8af9a8f37d2d0fb8dce62f631dd9 243 SUPERFAMILY SSF47598 1 33 3.56E-12 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 ambt_11075 0e1e8af9a8f37d2d0fb8dce62f631dd9 243 Pfam PF17206 SeqA protein N-terminal domain 1 33 1.3E-20 T 13-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal ambt_11075 0e1e8af9a8f37d2d0fb8dce62f631dd9 243 Gene3D G3DSA:1.20.1380.10 124 237 2.4E-39 T 13-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 ambt_11075 0e1e8af9a8f37d2d0fb8dce62f631dd9 243 SUPERFAMILY SSF82808 127 237 3.14E-36 T 13-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 ambt_11075 0e1e8af9a8f37d2d0fb8dce62f631dd9 243 Pfam PF03925 SeqA protein C-terminal domain 132 235 3.4E-34 T 13-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 ambt_20490 7bc831bafbd9dc86e8c0b9622f86db27 378 Gene3D G3DSA:3.40.50.300 10 211 1.1E-41 T 13-10-2018 ambt_20490 7bc831bafbd9dc86e8c0b9622f86db27 378 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 180 1.1E-35 T 13-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ambt_20490 7bc831bafbd9dc86e8c0b9622f86db27 378 SUPERFAMILY SSF52540 13 189 4.3E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_05605 39c38025160f41b81a771ce78abc2829 440 Gene3D G3DSA:2.120.10.30 80 351 3.5E-32 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_05605 39c38025160f41b81a771ce78abc2829 440 Gene3D G3DSA:2.120.10.30 352 437 2.7E-10 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_05605 39c38025160f41b81a771ce78abc2829 440 Pfam PF10282 Lactonase, 7-bladed beta-propeller 254 383 4.1E-6 T 13-10-2018 IPR019405 Lactonase, 7-bladed beta propeller ambt_05605 39c38025160f41b81a771ce78abc2829 440 SUPERFAMILY SSF63829 106 425 6.54E-22 T 13-10-2018 ambt_13450 2fe35d2fbc1900382a9b81f4e968dcda 283 PRINTS PR00207 Flagellin signature 111 134 5.4E-23 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13450 2fe35d2fbc1900382a9b81f4e968dcda 283 PRINTS PR00207 Flagellin signature 37 54 5.4E-23 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13450 2fe35d2fbc1900382a9b81f4e968dcda 283 PRINTS PR00207 Flagellin signature 76 95 5.4E-23 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13450 2fe35d2fbc1900382a9b81f4e968dcda 283 Pfam PF00700 Bacterial flagellin C-terminal helical region 198 282 1.4E-26 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ambt_13450 2fe35d2fbc1900382a9b81f4e968dcda 283 Gene3D G3DSA:1.20.58.1830 248 282 4.5E-42 T 13-10-2018 ambt_13450 2fe35d2fbc1900382a9b81f4e968dcda 283 Gene3D G3DSA:1.20.58.1830 5 33 1.1E-72 T 13-10-2018 ambt_13450 2fe35d2fbc1900382a9b81f4e968dcda 283 Gene3D G3DSA:1.20.1330.10 191 242 4.5E-42 T 13-10-2018 ambt_13450 2fe35d2fbc1900382a9b81f4e968dcda 283 Gene3D G3DSA:1.20.1330.10 45 176 1.1E-72 T 13-10-2018 ambt_13450 2fe35d2fbc1900382a9b81f4e968dcda 283 SUPERFAMILY SSF64518 1 282 3.01E-89 T 13-10-2018 ambt_13450 2fe35d2fbc1900382a9b81f4e968dcda 283 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 1.2E-36 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ambt_16995 2efa07f5d5a681b14314ffcf7dc648fa 313 SUPERFAMILY SSF56349 37 313 2.18E-16 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_16995 2efa07f5d5a681b14314ffcf7dc648fa 313 Gene3D G3DSA:1.10.443.10 131 313 2.1E-11 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_17055 c465a76ae6505f40e0d4de187945fa81 90 PIRSF PIRSF029827 1 90 1.5E-42 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ambt_17055 c465a76ae6505f40e0d4de187945fa81 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 7.0E-33 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ambt_17055 c465a76ae6505f40e0d4de187945fa81 90 SUPERFAMILY SSF111148 1 89 8.76E-39 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 ambt_17055 c465a76ae6505f40e0d4de187945fa81 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.04 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ambt_17055 c465a76ae6505f40e0d4de187945fa81 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 7.6E-42 T 13-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ambt_17055 c465a76ae6505f40e0d4de187945fa81 90 Gene3D G3DSA:1.10.3880.10 1 90 5.2E-38 T 13-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 ambt_03710 c1c952b6b86a48be97231b48cec822ac 293 Pfam PF01734 Patatin-like phospholipase 20 177 3.6E-25 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ambt_03710 c1c952b6b86a48be97231b48cec822ac 293 SUPERFAMILY SSF52151 19 279 5.76E-41 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ambt_03710 c1c952b6b86a48be97231b48cec822ac 293 Gene3D G3DSA:3.40.1090.10 110 183 1.2E-14 T 13-10-2018 ambt_03710 c1c952b6b86a48be97231b48cec822ac 293 Gene3D G3DSA:3.40.1090.10 10 109 1.8E-21 T 13-10-2018 ambt_12990 a6cb83376f9d183799a8ad036541d7a3 155 SMART SM00344 3 112 7.5E-46 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ambt_12990 a6cb83376f9d183799a8ad036541d7a3 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 6.5E-19 T 13-10-2018 ambt_12990 a6cb83376f9d183799a8ad036541d7a3 155 Pfam PF01037 Lrp/AsnC ligand binding domain 71 143 4.4E-20 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ambt_12990 a6cb83376f9d183799a8ad036541d7a3 155 SUPERFAMILY SSF54909 63 152 2.82E-20 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel ambt_12990 a6cb83376f9d183799a8ad036541d7a3 155 Gene3D G3DSA:1.10.10.10 4 55 3.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_12990 a6cb83376f9d183799a8ad036541d7a3 155 Gene3D G3DSA:3.30.70.920 56 140 1.2E-25 T 13-10-2018 ambt_12990 a6cb83376f9d183799a8ad036541d7a3 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.2E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ambt_12990 a6cb83376f9d183799a8ad036541d7a3 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.2E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ambt_12990 a6cb83376f9d183799a8ad036541d7a3 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.2E-15 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ambt_12990 a6cb83376f9d183799a8ad036541d7a3 155 SUPERFAMILY SSF46785 2 61 1.96E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_12990 a6cb83376f9d183799a8ad036541d7a3 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ambt_18155 212ccc09770c6c89fdc0043e2cb7b329 329 Gene3D G3DSA:3.30.460.20 2 142 5.4E-33 T 13-10-2018 ambt_18155 212ccc09770c6c89fdc0043e2cb7b329 329 Gene3D G3DSA:1.20.58.340 272 329 4.8E-13 T 13-10-2018 ambt_18155 212ccc09770c6c89fdc0043e2cb7b329 329 Pfam PF01544 CorA-like Mg2+ transporter protein 41 322 2.7E-52 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 ambt_18155 212ccc09770c6c89fdc0043e2cb7b329 329 SUPERFAMILY SSF143865 4 261 8.37E-38 T 13-10-2018 ambt_18155 212ccc09770c6c89fdc0043e2cb7b329 329 Gene3D G3DSA:1.20.58.340 143 267 4.1E-29 T 13-10-2018 ambt_18155 212ccc09770c6c89fdc0043e2cb7b329 329 SUPERFAMILY SSF144083 265 326 5.1E-15 T 13-10-2018 ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 Gene3D G3DSA:3.30.190.20 130 239 3.5E-244 T 13-10-2018 ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 22.794 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 Pfam PF00005 ABC transporter 798 860 2.1E-5 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 SUPERFAMILY SSF52540 619 911 8.89E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 Gene3D G3DSA:1.10.8.280 287 403 3.5E-244 T 13-10-2018 ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 Gene3D G3DSA:1.20.1580.10 692 830 9.4E-141 T 13-10-2018 ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 Gene3D G3DSA:3.40.50.300 616 936 9.4E-141 T 13-10-2018 ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 SUPERFAMILY SSF52540 3 569 1.25E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 Gene3D G3DSA:3.40.50.300 6 595 3.5E-244 T 13-10-2018 ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 Gene3D G3DSA:1.20.1580.10 90 492 3.5E-244 T 13-10-2018 ambt_17405 af5b8e24a7a20b7c56fbc53138a5f9b7 944 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_18265 0447e7b76f00ad56a63b2b5506195dc9 337 SUPERFAMILY SSF52540 1 233 1.01E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_18265 0447e7b76f00ad56a63b2b5506195dc9 337 SUPERFAMILY SSF50331 232 323 7.65E-10 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ambt_18265 0447e7b76f00ad56a63b2b5506195dc9 337 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_18265 0447e7b76f00ad56a63b2b5506195dc9 337 Pfam PF00005 ABC transporter 18 154 6.1E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_18265 0447e7b76f00ad56a63b2b5506195dc9 337 Gene3D G3DSA:2.40.50.940 215 269 8.0E-8 T 13-10-2018 ambt_18265 0447e7b76f00ad56a63b2b5506195dc9 337 Pfam PF08402 TOBE domain 263 324 8.1E-8 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 ambt_18265 0447e7b76f00ad56a63b2b5506195dc9 337 SMART SM00382 26 203 3.5E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_18265 0447e7b76f00ad56a63b2b5506195dc9 337 Gene3D G3DSA:2.40.50.140 270 325 8.0E-8 T 13-10-2018 ambt_18265 0447e7b76f00ad56a63b2b5506195dc9 337 Gene3D G3DSA:3.40.50.300 1 214 2.0E-52 T 13-10-2018 ambt_20025 10274c35d02fed829ded9dbf83302399 451 SUPERFAMILY SSF51445 14 444 2.99E-149 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_20025 10274c35d02fed829ded9dbf83302399 451 Gene3D G3DSA:3.20.20.80 11 447 2.8E-157 T 13-10-2018 ambt_20025 10274c35d02fed829ded9dbf83302399 451 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 349 357 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site ambt_20025 10274c35d02fed829ded9dbf83302399 451 TIGRFAM TIGR03356 BGL: beta-galactosidase 13 435 8.8E-174 T 13-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 ambt_20025 10274c35d02fed829ded9dbf83302399 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 381 5.8E-24 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_20025 10274c35d02fed829ded9dbf83302399 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 408 5.8E-24 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_20025 10274c35d02fed829ded9dbf83302399 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 349 357 5.8E-24 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_20025 10274c35d02fed829ded9dbf83302399 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 427 5.8E-24 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_20025 10274c35d02fed829ded9dbf83302399 451 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 5.8E-24 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_20025 10274c35d02fed829ded9dbf83302399 451 Pfam PF00232 Glycosyl hydrolase family 1 13 443 9.0E-139 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ambt_16520 ab2974911214a556d68bacc0c7fe6159 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16520 ab2974911214a556d68bacc0c7fe6159 91 PIRSF PIRSF002144 1 91 1.6E-32 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16520 ab2974911214a556d68bacc0c7fe6159 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.3E-24 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16520 ab2974911214a556d68bacc0c7fe6159 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.3E-24 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16520 ab2974911214a556d68bacc0c7fe6159 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.3E-24 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16520 ab2974911214a556d68bacc0c7fe6159 91 Pfam PF00203 Ribosomal protein S19 3 83 6.9E-36 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16520 ab2974911214a556d68bacc0c7fe6159 91 SUPERFAMILY SSF54570 3 83 9.94E-35 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16520 ab2974911214a556d68bacc0c7fe6159 91 Gene3D G3DSA:3.30.860.10 1 91 1.2E-41 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16520 ab2974911214a556d68bacc0c7fe6159 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.461 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_16520 ab2974911214a556d68bacc0c7fe6159 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 2.9E-45 T 13-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 ambt_20975 3555982a9078c64883b3650ba9c9c58a 244 Pfam PF12834 Phage integrase, N-terminal 3 47 8.0E-11 T 13-10-2018 IPR024457 Putative integrase, N-terminal ambt_20975 3555982a9078c64883b3650ba9c9c58a 244 Gene3D G3DSA:1.10.443.10 71 243 2.7E-6 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_20975 3555982a9078c64883b3650ba9c9c58a 244 SUPERFAMILY SSF56349 3 191 6.77E-10 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_20975 3555982a9078c64883b3650ba9c9c58a 244 Pfam PF12835 Integrase 83 190 4.9E-14 T 13-10-2018 IPR024456 Integrase catalytic domain, putative ambt_19365 2d5d638c6e418e3585827724f87240aa 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.244 T 13-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19365 2d5d638c6e418e3585827724f87240aa 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 8.0E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19365 2d5d638c6e418e3585827724f87240aa 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 8.0E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19365 2d5d638c6e418e3585827724f87240aa 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 8.0E-23 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19365 2d5d638c6e418e3585827724f87240aa 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 4.8E-35 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19365 2d5d638c6e418e3585827724f87240aa 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19365 2d5d638c6e418e3585827724f87240aa 70 SUPERFAMILY SSF143800 1 67 4.32E-29 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19365 2d5d638c6e418e3585827724f87240aa 70 Gene3D G3DSA:2.30.170.50 1 70 1.5E-34 T 13-10-2018 ambt_19365 2d5d638c6e418e3585827724f87240aa 70 Pfam PF01197 Ribosomal protein L31 1 65 7.4E-32 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_00380 ed8469df46e3e69ef6e5e778647b54e4 1006 Pfam PF07715 TonB-dependent Receptor Plug Domain 155 238 1.4E-4 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_00380 ed8469df46e3e69ef6e5e778647b54e4 1006 SUPERFAMILY SSF56935 114 968 8.24E-59 T 13-10-2018 ambt_00380 ed8469df46e3e69ef6e5e778647b54e4 1006 SUPERFAMILY SSF49464 34 126 3.53E-7 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ambt_00380 ed8469df46e3e69ef6e5e778647b54e4 1006 Pfam PF13620 Carboxypeptidase regulatory-like domain 34 113 7.0E-14 T 13-10-2018 ambt_00380 ed8469df46e3e69ef6e5e778647b54e4 1006 Gene3D G3DSA:2.170.130.10 110 240 4.7E-5 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_13825 2c77e19837a0e7ea1534e31e629ebc65 105 Gene3D G3DSA:1.10.150.320 27 102 4.0E-20 T 13-10-2018 ambt_13825 2c77e19837a0e7ea1534e31e629ebc65 105 Pfam PF12836 Helix-hairpin-helix motif 40 101 7.2E-21 T 13-10-2018 ambt_13825 2c77e19837a0e7ea1534e31e629ebc65 105 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 40 101 5.4E-20 T 13-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain ambt_13825 2c77e19837a0e7ea1534e31e629ebc65 105 SMART SM00278 51 70 0.14 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ambt_13825 2c77e19837a0e7ea1534e31e629ebc65 105 SMART SM00278 81 100 200.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ambt_13825 2c77e19837a0e7ea1534e31e629ebc65 105 SUPERFAMILY SSF47781 36 103 1.56E-23 T 13-10-2018 IPR010994 RuvA domain 2-like ambt_00495 00e08bc56f1b3a996e59ef3ad1253bd0 291 Pfam PF00753 Metallo-beta-lactamase superfamily 58 225 2.4E-15 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_00495 00e08bc56f1b3a996e59ef3ad1253bd0 291 Gene3D G3DSA:3.60.15.10 34 251 7.3E-47 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_00495 00e08bc56f1b3a996e59ef3ad1253bd0 291 SUPERFAMILY SSF56281 7 287 1.83E-50 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_00495 00e08bc56f1b3a996e59ef3ad1253bd0 291 SMART SM00849 51 225 7.2E-24 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_22110 ec62ab7068433ba43dacfc25d8f7fee0 202 PRINTS PR01021 OMPA domain signature 126 141 7.4E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_22110 ec62ab7068433ba43dacfc25d8f7fee0 202 PRINTS PR01021 OMPA domain signature 96 118 7.4E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_22110 ec62ab7068433ba43dacfc25d8f7fee0 202 PRINTS PR01021 OMPA domain signature 141 157 7.4E-13 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_22110 ec62ab7068433ba43dacfc25d8f7fee0 202 Pfam PF13488 Glycine zipper 20 65 2.5E-12 T 13-10-2018 IPR039567 Glycine zipper domain ambt_22110 ec62ab7068433ba43dacfc25d8f7fee0 202 ProSitePatterns PS01068 OmpA-like domain. 128 172 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 ambt_22110 ec62ab7068433ba43dacfc25d8f7fee0 202 Pfam PF00691 OmpA family 95 190 8.3E-23 T 13-10-2018 IPR006665 OmpA-like domain ambt_22110 ec62ab7068433ba43dacfc25d8f7fee0 202 Gene3D G3DSA:3.30.1330.60 59 202 5.6E-47 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_22110 ec62ab7068433ba43dacfc25d8f7fee0 202 SUPERFAMILY SSF103088 83 198 5.62E-39 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_09495 1dad91321b661fcea01b53fd20d49dbe 209 Gene3D G3DSA:3.40.50.150 32 209 3.1E-59 T 13-10-2018 ambt_09495 1dad91321b661fcea01b53fd20d49dbe 209 SUPERFAMILY SSF53335 32 208 2.67E-42 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_09495 1dad91321b661fcea01b53fd20d49dbe 209 Pfam PF01728 FtsJ-like methyltransferase 32 207 8.3E-55 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 ambt_09495 1dad91321b661fcea01b53fd20d49dbe 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.827 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 ambt_09495 1dad91321b661fcea01b53fd20d49dbe 209 PIRSF PIRSF005461 1 209 1.5E-79 T 13-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 ambt_03240 f97086ffa9a149f170a2c763ff36b4f6 486 Pfam PF12146 Serine aminopeptidase, S33 225 453 2.8E-15 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 ambt_03240 f97086ffa9a149f170a2c763ff36b4f6 486 SUPERFAMILY SSF53474 146 484 2.83E-34 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_03240 f97086ffa9a149f170a2c763ff36b4f6 486 Gene3D G3DSA:3.40.50.1820 178 477 2.2E-39 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_20930 053a7820c1622ce31fa6b2f112e3e1e8 413 Gene3D G3DSA:3.40.50.1820 198 413 1.4E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_20930 053a7820c1622ce31fa6b2f112e3e1e8 413 SUPERFAMILY SSF53474 197 405 1.49E-26 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_20930 053a7820c1622ce31fa6b2f112e3e1e8 413 Pfam PF05057 Putative serine esterase (DUF676) 204 311 6.9E-9 T 13-10-2018 IPR007751 Domain of unknown function DUF676, lipase-like ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 Gene3D G3DSA:3.90.480.20 15 418 7.6E-82 T 13-10-2018 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 PRINTS PR00397 Sirohaem Fe-binding site signature 479 497 3.4E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 PRINTS PR00397 Sirohaem Fe-binding site signature 431 449 3.4E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 433 554 0.5 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 354 418 5.3E-15 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 78 138 6.1E-14 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 SUPERFAMILY SSF55124 13 144 4.25E-26 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 18 560 2.6E-278 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 Gene3D G3DSA:3.30.413.10 427 569 2.5E-34 T 13-10-2018 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 SUPERFAMILY SSF56014 148 345 4.19E-56 T 13-10-2018 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 9 572 58.586 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 SUPERFAMILY SSF56014 429 561 5.1E-33 T 13-10-2018 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 479 495 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 172 330 2.8E-45 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 Gene3D G3DSA:3.30.413.10 140 349 7.6E-82 T 13-10-2018 ambt_00750 d59827265c06cbcc9e6dc655c6a5ee92 572 SUPERFAMILY SSF55124 347 424 3.93E-22 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ambt_16685 f4c5855b847f14c6feb7effa1c7e7e8d 412 Gene3D G3DSA:1.20.1250.20 3 196 3.5E-16 T 13-10-2018 ambt_16685 f4c5855b847f14c6feb7effa1c7e7e8d 412 Gene3D G3DSA:1.20.1250.20 202 404 1.1E-28 T 13-10-2018 ambt_16685 f4c5855b847f14c6feb7effa1c7e7e8d 412 Pfam PF07690 Major Facilitator Superfamily 10 299 3.7E-16 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_16685 f4c5855b847f14c6feb7effa1c7e7e8d 412 SUPERFAMILY SSF103473 3 405 4.05E-39 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_07090 d53c3840f345947c4db858dabd591a27 136 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 45 98 3.7E-9 T 13-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter ambt_07090 d53c3840f345947c4db858dabd591a27 136 TIGRFAM TIGR02230 ATPase_gene1: putative F0F1-ATPase subunit 12 102 6.2E-30 T 13-10-2018 IPR011744 F0F1-ATPase subunit, putative ambt_03050 d940790673060e7d220751815f406568 558 Pfam PF01471 Putative peptidoglycan binding domain 43 101 1.6E-5 T 13-10-2018 IPR002477 Peptidoglycan binding-like ambt_03050 d940790673060e7d220751815f406568 558 Gene3D G3DSA:1.10.101.10 26 103 1.3E-5 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ambt_03050 d940790673060e7d220751815f406568 558 SUPERFAMILY SSF47090 35 102 2.04E-9 T 13-10-2018 IPR036365 PGBD-like superfamily ambt_04045 a88c703ea9564e30ba1ebc2e6a32da73 187 Pfam PF07209 Protein of unknown function (DUF1415) 6 171 1.8E-57 T 13-10-2018 IPR009858 Protein of unknown function DUF1415 ambt_07850 f3745fb1d9bede9637f951d944a12b2d 80 SMART SM00054 48 76 6.6E-5 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 ambt_07850 f3745fb1d9bede9637f951d944a12b2d 80 SMART SM00054 12 40 6.0E-4 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 ambt_07850 f3745fb1d9bede9637f951d944a12b2d 80 ProSitePatterns PS00018 EF-hand calcium-binding domain. 21 33 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_07850 f3745fb1d9bede9637f951d944a12b2d 80 Pfam PF13499 EF-hand domain pair 11 73 3.4E-13 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 ambt_07850 f3745fb1d9bede9637f951d944a12b2d 80 ProSitePatterns PS00018 EF-hand calcium-binding domain. 57 69 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_07850 f3745fb1d9bede9637f951d944a12b2d 80 SUPERFAMILY SSF47473 4 74 3.87E-19 T 13-10-2018 IPR011992 EF-hand domain pair ambt_07850 f3745fb1d9bede9637f951d944a12b2d 80 Gene3D G3DSA:1.10.238.10 1 76 3.3E-19 T 13-10-2018 ambt_00055 05dc78c9f9a8b61b2628b9cb2594627f 207 PRINTS PR00605 Class IC cytochrome C signature 81 103 3.5E-5 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 ambt_00055 05dc78c9f9a8b61b2628b9cb2594627f 207 PRINTS PR00605 Class IC cytochrome C signature 32 43 3.5E-5 T 13-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 ambt_00055 05dc78c9f9a8b61b2628b9cb2594627f 207 Gene3D G3DSA:1.10.760.10 21 108 3.0E-25 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_00055 05dc78c9f9a8b61b2628b9cb2594627f 207 SUPERFAMILY SSF46626 5 109 7.42E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_00055 05dc78c9f9a8b61b2628b9cb2594627f 207 Gene3D G3DSA:1.10.760.10 111 207 1.8E-26 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_00055 05dc78c9f9a8b61b2628b9cb2594627f 207 Pfam PF00034 Cytochrome c 29 106 7.1E-11 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_00055 05dc78c9f9a8b61b2628b9cb2594627f 207 Pfam PF00034 Cytochrome c 120 205 9.8E-9 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_00055 05dc78c9f9a8b61b2628b9cb2594627f 207 PIRSF PIRSF000005 1 207 8.4E-64 T 13-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 ambt_00055 05dc78c9f9a8b61b2628b9cb2594627f 207 SUPERFAMILY SSF46626 117 205 1.89E-21 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_11420 21ec13614a638a9e0e445d8438efc403 502 Gene3D G3DSA:3.60.110.10 245 466 1.1E-8 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ambt_11420 21ec13614a638a9e0e445d8438efc403 502 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 3 488 21.657 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 ambt_11420 21ec13614a638a9e0e445d8438efc403 502 Pfam PF00795 Carbon-nitrogen hydrolase 212 462 1.5E-24 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ambt_11420 21ec13614a638a9e0e445d8438efc403 502 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 55 447 1.8E-86 T 13-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 ambt_11420 21ec13614a638a9e0e445d8438efc403 502 SUPERFAMILY SSF56317 206 465 1.01E-31 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ambt_18965 c86b215525540469674ba4cc88fb5282 352 SUPERFAMILY SSF53756 4 349 2.36E-27 T 13-10-2018 ambt_18965 c86b215525540469674ba4cc88fb5282 352 Pfam PF00534 Glycosyl transferases group 1 239 327 6.8E-13 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_18965 c86b215525540469674ba4cc88fb5282 352 Gene3D G3DSA:3.40.50.2000 159 335 4.9E-22 T 13-10-2018 ambt_20640 cd7f6e112ec2041ffbd030b13a87ecdd 102 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 30.11 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20640 cd7f6e112ec2041ffbd030b13a87ecdd 102 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 101 1.5E-43 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20640 cd7f6e112ec2041ffbd030b13a87ecdd 102 SUPERFAMILY SSF51278 1 101 2.22E-44 T 13-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20640 cd7f6e112ec2041ffbd030b13a87ecdd 102 Gene3D G3DSA:2.10.150.10 1 102 1.9E-44 T 13-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_20640 cd7f6e112ec2041ffbd030b13a87ecdd 102 Pfam PF00699 Urease beta subunit 3 99 3.6E-43 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ambt_12750 8b66875882d91762cee2f6aef145eb17 358 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 37 355 1.0E-58 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 ambt_12750 8b66875882d91762cee2f6aef145eb17 358 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 234 354 1.7E-33 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain ambt_12750 8b66875882d91762cee2f6aef145eb17 358 SUPERFAMILY SSF48179 234 354 1.77E-31 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_12750 8b66875882d91762cee2f6aef145eb17 358 Gene3D G3DSA:3.40.50.720 37 232 5.9E-32 T 13-10-2018 ambt_12750 8b66875882d91762cee2f6aef145eb17 358 Gene3D G3DSA:1.10.1040.10 234 356 2.8E-37 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ambt_12750 8b66875882d91762cee2f6aef145eb17 358 Pfam PF02558 Ketopantoate reductase PanE/ApbA 38 200 5.2E-21 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain ambt_12750 8b66875882d91762cee2f6aef145eb17 358 SUPERFAMILY SSF51735 37 205 8.72E-29 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_06715 980a37f2ca0acc762a58660bf465c9b1 376 Pfam PF01435 Peptidase family M48 224 372 1.1E-20 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ambt_04945 7b11e83a5010e18bab938edda3044610 121 SUPERFAMILY SSF49503 18 112 4.74E-14 T 13-10-2018 IPR008972 Cupredoxin ambt_04945 7b11e83a5010e18bab938edda3044610 121 Gene3D G3DSA:2.60.40.420 20 112 1.0E-17 T 13-10-2018 IPR008972 Cupredoxin ambt_04945 7b11e83a5010e18bab938edda3044610 121 Pfam PF13473 Cupredoxin-like domain 15 111 2.2E-22 T 13-10-2018 IPR028096 EfeO-type cupredoxin-like domain ambt_09680 b88749a2fa4a2af8ead073bc5971be75 369 Pfam PF03054 tRNA methyl transferase 10 364 3.1E-141 T 13-10-2018 ambt_09680 b88749a2fa4a2af8ead073bc5971be75 369 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 10 365 40.508 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ambt_09680 b88749a2fa4a2af8ead073bc5971be75 369 SUPERFAMILY SSF52402 9 248 1.32E-54 T 13-10-2018 ambt_09680 b88749a2fa4a2af8ead073bc5971be75 369 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 10 364 3.8E-153 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ambt_09680 b88749a2fa4a2af8ead073bc5971be75 369 Gene3D G3DSA:3.40.50.620 2 215 5.3E-96 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_09680 b88749a2fa4a2af8ead073bc5971be75 369 Gene3D G3DSA:2.40.30.10 286 368 1.7E-30 T 13-10-2018 ambt_09680 b88749a2fa4a2af8ead073bc5971be75 369 Gene3D G3DSA:2.30.30.280 217 285 2.5E-26 T 13-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ambt_05515 9fb9243dfe8d5bbdb27c1e8f16f7449d 377 SUPERFAMILY SSF103473 6 371 7.59E-36 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_05515 9fb9243dfe8d5bbdb27c1e8f16f7449d 377 Gene3D G3DSA:1.20.1250.20 2 175 4.3E-13 T 13-10-2018 ambt_05515 9fb9243dfe8d5bbdb27c1e8f16f7449d 377 Gene3D G3DSA:1.20.1250.20 183 366 2.8E-20 T 13-10-2018 ambt_05515 9fb9243dfe8d5bbdb27c1e8f16f7449d 377 Pfam PF07690 Major Facilitator Superfamily 9 312 2.1E-18 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_02460 244cea2fecb65586f1a44fe183a75009 359 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 263 349 1.5E-20 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ambt_02460 244cea2fecb65586f1a44fe183a75009 359 Gene3D G3DSA:3.30.1360.120 7 231 1.6E-87 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ambt_02460 244cea2fecb65586f1a44fe183a75009 359 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 354 3.3E-145 T 13-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ambt_02460 244cea2fecb65586f1a44fe183a75009 359 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 354 44.555 T 13-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ambt_02460 244cea2fecb65586f1a44fe183a75009 359 SUPERFAMILY SSF103025 4 277 1.1E-90 T 13-10-2018 ambt_02460 244cea2fecb65586f1a44fe183a75009 359 SUPERFAMILY SSF101790 273 356 6.21E-25 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal ambt_02460 244cea2fecb65586f1a44fe183a75009 359 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 2.8E-87 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain ambt_02460 244cea2fecb65586f1a44fe183a75009 359 Gene3D G3DSA:2.40.30.110 277 359 2.3E-32 T 13-10-2018 ambt_02460 244cea2fecb65586f1a44fe183a75009 359 Gene3D G3DSA:4.10.1250.10 232 276 3.1E-27 T 13-10-2018 ambt_02460 244cea2fecb65586f1a44fe183a75009 359 Gene3D G3DSA:3.30.70.1400 51 138 1.6E-87 T 13-10-2018 ambt_02460 244cea2fecb65586f1a44fe183a75009 359 PIRSF PIRSF006487 1 358 2.4E-84 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ambt_05200 57e05c3e63c6a8077b07572ef392a24d 710 Pfam PF00593 TonB dependent receptor 257 707 2.9E-53 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_05200 57e05c3e63c6a8077b07572ef392a24d 710 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 158 2.1E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_05200 57e05c3e63c6a8077b07572ef392a24d 710 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 58 706 9.9E-111 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ambt_05200 57e05c3e63c6a8077b07572ef392a24d 710 Gene3D G3DSA:2.170.130.10 40 169 7.3E-29 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_05200 57e05c3e63c6a8077b07572ef392a24d 710 Gene3D G3DSA:2.40.170.20 170 710 9.0E-124 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_05200 57e05c3e63c6a8077b07572ef392a24d 710 SUPERFAMILY SSF56935 24 710 1.02E-130 T 13-10-2018 ambt_14565 bb804f35a24d7143c64fd3dfb22aaa56 258 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 256 1.0E-94 T 13-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria ambt_14565 bb804f35a24d7143c64fd3dfb22aaa56 258 Pfam PF02405 Permease MlaE 42 253 6.5E-76 T 13-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 ambt_00250 0e976ca6c35fdb3d66f1dc5ba0af0541 188 Gene3D G3DSA:1.25.40.20 17 188 7.2E-37 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ambt_00250 0e976ca6c35fdb3d66f1dc5ba0af0541 188 Pfam PF12796 Ankyrin repeats (3 copies) 35 124 7.8E-13 T 13-10-2018 IPR020683 Ankyrin repeat-containing domain ambt_00250 0e976ca6c35fdb3d66f1dc5ba0af0541 188 SMART SM00248 95 124 0.49 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 ambt_00250 0e976ca6c35fdb3d66f1dc5ba0af0541 188 SMART SM00248 128 157 2.5 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 ambt_00250 0e976ca6c35fdb3d66f1dc5ba0af0541 188 SMART SM00248 61 89 0.0072 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 ambt_00250 0e976ca6c35fdb3d66f1dc5ba0af0541 188 Pfam PF00023 Ankyrin repeat 129 159 7.7E-4 T 13-10-2018 IPR002110 Ankyrin repeat GO:0005515 ambt_00250 0e976ca6c35fdb3d66f1dc5ba0af0541 188 SUPERFAMILY SSF48403 34 181 1.82E-33 T 13-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ambt_13710 b298aec0b907561281359d3d7aad3e28 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 252 41.425 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_13710 b298aec0b907561281359d3d7aad3e28 264 SUPERFAMILY SSF55920 4 254 9.03E-92 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like ambt_13710 b298aec0b907561281359d3d7aad3e28 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_13710 b298aec0b907561281359d3d7aad3e28 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 1.8E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_13710 b298aec0b907561281359d3d7aad3e28 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 1.8E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_13710 b298aec0b907561281359d3d7aad3e28 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 1.8E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_13710 b298aec0b907561281359d3d7aad3e28 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 1.8E-21 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_13710 b298aec0b907561281359d3d7aad3e28 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 5 251 1.1E-97 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_13710 b298aec0b907561281359d3d7aad3e28 264 Pfam PF00557 Metallopeptidase family M24 12 243 1.1E-55 T 13-10-2018 IPR000994 Peptidase M24 ambt_13710 b298aec0b907561281359d3d7aad3e28 264 Gene3D G3DSA:3.90.230.10 2 261 3.1E-113 T 13-10-2018 ambt_14430 44487a9703d900464be8763edf3b831c 304 SUPERFAMILY SSF46689 201 252 1.94E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_14430 44487a9703d900464be8763edf3b831c 304 SUPERFAMILY SSF46689 255 302 3.72E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_14430 44487a9703d900464be8763edf3b831c 304 SMART SM00342 218 300 7.3E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_14430 44487a9703d900464be8763edf3b831c 304 SUPERFAMILY SSF51215 64 167 6.8E-5 T 13-10-2018 IPR037923 Transcription regulator HTH-like ambt_14430 44487a9703d900464be8763edf3b831c 304 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 255 296 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ambt_14430 44487a9703d900464be8763edf3b831c 304 Pfam PF06719 AraC-type transcriptional regulator N-terminus 41 190 1.4E-28 T 13-10-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal ambt_14430 44487a9703d900464be8763edf3b831c 304 Gene3D G3DSA:1.10.10.60 197 304 2.6E-24 T 13-10-2018 ambt_14430 44487a9703d900464be8763edf3b831c 304 Pfam PF12833 Helix-turn-helix domain 224 300 1.1E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_18845 2f23f763c8043950dce55b7b58f43d5d 568 Gene3D G3DSA:1.20.1560.10 11 325 3.6E-26 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_18845 2f23f763c8043950dce55b7b58f43d5d 568 SUPERFAMILY SSF52540 378 530 2.26E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_18845 2f23f763c8043950dce55b7b58f43d5d 568 SUPERFAMILY SSF90123 14 319 4.84E-34 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_18845 2f23f763c8043950dce55b7b58f43d5d 568 Pfam PF00664 ABC transporter transmembrane region 29 294 1.9E-12 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ambt_18845 2f23f763c8043950dce55b7b58f43d5d 568 Gene3D G3DSA:3.40.50.300 341 567 5.7E-13 T 13-10-2018 ambt_03930 0dcab592bd14cd4bc8815b0137136f7d 405 Gene3D G3DSA:3.40.640.10 36 295 2.9E-166 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_03930 0dcab592bd14cd4bc8815b0137136f7d 405 Pfam PF00266 Aminotransferase class-V 25 393 1.9E-143 T 13-10-2018 IPR000192 Aminotransferase class V domain ambt_03930 0dcab592bd14cd4bc8815b0137136f7d 405 Gene3D G3DSA:3.90.1150.10 9 397 2.9E-166 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_03930 0dcab592bd14cd4bc8815b0137136f7d 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ambt_03930 0dcab592bd14cd4bc8815b0137136f7d 405 SUPERFAMILY SSF53383 4 400 3.89E-121 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_03930 0dcab592bd14cd4bc8815b0137136f7d 405 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 403 2.8E-164 T 13-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ambt_03695 b4073ed802982bdd41ab71cb1875dabc 260 SUPERFAMILY SSF50494 30 254 2.66E-32 T 13-10-2018 IPR009003 Peptidase S1, PA clan ambt_03695 b4073ed802982bdd41ab71cb1875dabc 260 Pfam PF13365 Trypsin-like peptidase domain 59 220 1.7E-22 T 13-10-2018 ambt_03695 b4073ed802982bdd41ab71cb1875dabc 260 Gene3D G3DSA:2.40.10.10 20 129 3.0E-13 T 13-10-2018 ambt_03695 b4073ed802982bdd41ab71cb1875dabc 260 Gene3D G3DSA:2.40.10.10 130 260 2.1E-18 T 13-10-2018 ambt_11480 f9047f50caa82b9859da6c109cbfd736 266 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 149 166 - T 13-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_11480 f9047f50caa82b9859da6c109cbfd736 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 263 2.6E-42 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_11480 f9047f50caa82b9859da6c109cbfd736 266 SUPERFAMILY SSF55347 126 235 1.22E-34 T 13-10-2018 ambt_11480 f9047f50caa82b9859da6c109cbfd736 266 Gene3D G3DSA:3.30.360.10 126 233 2.0E-96 T 13-10-2018 ambt_11480 f9047f50caa82b9859da6c109cbfd736 266 SUPERFAMILY SSF51735 1 265 2.39E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_11480 f9047f50caa82b9859da6c109cbfd736 266 Gene3D G3DSA:3.40.50.720 2 263 2.0E-96 T 13-10-2018 ambt_11480 f9047f50caa82b9859da6c109cbfd736 266 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 264 33.213 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_11480 f9047f50caa82b9859da6c109cbfd736 266 PIRSF PIRSF000161 1 266 3.0E-84 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_11480 f9047f50caa82b9859da6c109cbfd736 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 124 5.9E-34 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_11480 f9047f50caa82b9859da6c109cbfd736 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 264 1.8E-86 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_18450 5cdad44c588aef28fcc7ea094ee50dda 541 Gene3D G3DSA:3.20.20.70 312 518 5.0E-55 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_18450 5cdad44c588aef28fcc7ea094ee50dda 541 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 329 508 8.2E-48 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ambt_18450 5cdad44c588aef28fcc7ea094ee50dda 541 Pfam PF08543 Phosphomethylpyrimidine kinase 28 263 2.0E-49 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 ambt_18450 5cdad44c588aef28fcc7ea094ee50dda 541 SUPERFAMILY SSF51391 319 515 2.88E-58 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ambt_18450 5cdad44c588aef28fcc7ea094ee50dda 541 Gene3D G3DSA:3.40.1190.20 3 279 3.4E-62 T 13-10-2018 IPR029056 Ribokinase-like ambt_18450 5cdad44c588aef28fcc7ea094ee50dda 541 Pfam PF02581 Thiamine monophosphate synthase 328 496 1.9E-48 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ambt_18450 5cdad44c588aef28fcc7ea094ee50dda 541 SUPERFAMILY SSF53613 19 261 5.3E-49 T 13-10-2018 IPR029056 Ribokinase-like ambt_18450 5cdad44c588aef28fcc7ea094ee50dda 541 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 310 514 19.032 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ambt_15905 284dc8c221513b72ebccf71dd5f7d1fd 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 219 2.2E-64 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ambt_15905 284dc8c221513b72ebccf71dd5f7d1fd 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 7 224 1.4E-74 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ambt_15905 284dc8c221513b72ebccf71dd5f7d1fd 251 ProSitePatterns PS01218 TatC family signature. 152 171 - T 13-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site ambt_15905 284dc8c221513b72ebccf71dd5f7d1fd 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 237 15.935 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ambt_15905 284dc8c221513b72ebccf71dd5f7d1fd 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 101 127 3.9E-48 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ambt_15905 284dc8c221513b72ebccf71dd5f7d1fd 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 83 101 3.9E-48 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ambt_15905 284dc8c221513b72ebccf71dd5f7d1fd 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 6 33 3.9E-48 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ambt_15905 284dc8c221513b72ebccf71dd5f7d1fd 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 152 180 3.9E-48 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ambt_09045 e7a8ceeae86e38ec87585ac09c417a47 195 Pfam PF01694 Rhomboid family 44 189 2.9E-8 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ambt_09045 e7a8ceeae86e38ec87585ac09c417a47 195 SUPERFAMILY SSF144091 16 193 9.68E-25 T 13-10-2018 ambt_09045 e7a8ceeae86e38ec87585ac09c417a47 195 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 34 185 1.1E-51 T 13-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria ambt_09045 e7a8ceeae86e38ec87585ac09c417a47 195 Gene3D G3DSA:1.20.1540.10 8 195 6.4E-13 T 13-10-2018 IPR035952 Rhomboid-like superfamily ambt_22030 f3c783ed9ab2c98dcfc7ad9e5190d45f 416 Pfam PF13657 HipA N-terminal domain 21 97 4.1E-5 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 ambt_22030 f3c783ed9ab2c98dcfc7ad9e5190d45f 416 Pfam PF07804 HipA-like C-terminal domain 182 392 4.6E-50 T 13-10-2018 IPR012893 HipA-like, C-terminal ambt_13685 0b743dc36b5ea45a2d77ac5e14988fa8 260 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 23 249 3.0E-101 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ambt_13685 0b743dc36b5ea45a2d77ac5e14988fa8 260 SUPERFAMILY SSF64005 23 245 1.7E-87 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ambt_13685 0b743dc36b5ea45a2d77ac5e14988fa8 260 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 22 250 40.367 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ambt_13685 0b743dc36b5ea45a2d77ac5e14988fa8 260 Pfam PF01255 Putative undecaprenyl diphosphate synthase 29 249 1.2E-82 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ambt_13685 0b743dc36b5ea45a2d77ac5e14988fa8 260 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 195 212 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 ambt_13685 0b743dc36b5ea45a2d77ac5e14988fa8 260 Gene3D G3DSA:3.40.1180.10 9 250 4.5E-94 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ambt_17905 0f96ab8f6ffb7b55d450ddaeafc62a10 87 SUPERFAMILY SSF48076 4 81 2.35E-5 T 13-10-2018 IPR036622 Dioxygenase LigAB, LigA subunit superfamily ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 SUPERFAMILY SSF46589 857 921 2.41E-16 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 905 0.0 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 PRINTS PR00986 Valyl-tRNA synthetase signature 227 244 1.7E-35 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 PRINTS PR00986 Valyl-tRNA synthetase signature 33 44 1.7E-35 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 PRINTS PR00986 Valyl-tRNA synthetase signature 343 356 1.7E-35 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 PRINTS PR00986 Valyl-tRNA synthetase signature 443 464 1.7E-35 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 PRINTS PR00986 Valyl-tRNA synthetase signature 474 492 1.7E-35 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 Gene3D G3DSA:3.90.740.10 203 327 8.0E-37 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 SUPERFAMILY SSF52374 1 609 5.42E-135 T 13-10-2018 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 SUPERFAMILY SSF47323 610 872 1.35E-66 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 13 599 2.6E-215 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 Pfam PF08264 Anticodon-binding domain of tRNA 642 797 2.5E-43 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 922 16.171 T 13-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 SUPERFAMILY SSF50677 187 339 1.26E-64 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 Gene3D G3DSA:1.10.730.10 546 790 2.7E-70 T 13-10-2018 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 Gene3D G3DSA:1.10.287.380 850 922 5.1E-20 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 Gene3D G3DSA:3.40.50.620 328 545 1.2E-61 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 Gene3D G3DSA:3.40.50.620 3 202 3.1E-62 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_01425 51b9c83245d36472ba62f4de12c66caa 924 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 857 920 7.5E-17 T 13-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 ambt_09705 274b9ae66e135d49b82e6f81526ce1ec 155 Pfam PF13673 Acetyltransferase (GNAT) domain 41 141 8.2E-8 T 13-10-2018 IPR000182 GNAT domain ambt_09705 274b9ae66e135d49b82e6f81526ce1ec 155 Gene3D G3DSA:3.40.630.30 2 143 1.7E-23 T 13-10-2018 ambt_09705 274b9ae66e135d49b82e6f81526ce1ec 155 SUPERFAMILY SSF55729 3 145 3.24E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_19535 b957fc73401da649b62d9084cb4ca962 306 SMART SM00382 29 211 5.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_19535 b957fc73401da649b62d9084cb4ca962 306 SUPERFAMILY SSF52540 4 231 4.79E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19535 b957fc73401da649b62d9084cb4ca962 306 Gene3D G3DSA:3.40.50.300 1 236 1.2E-65 T 13-10-2018 ambt_19535 b957fc73401da649b62d9084cb4ca962 306 Pfam PF00005 ABC transporter 20 164 1.3E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_19535 b957fc73401da649b62d9084cb4ca962 306 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_08900 b416c3a11c83a767c7598d446426996e 251 Pfam PF00308 Bacterial dnaA protein 51 231 3.6E-16 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA ambt_08900 b416c3a11c83a767c7598d446426996e 251 SUPERFAMILY SSF52540 18 228 7.39E-28 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_08900 b416c3a11c83a767c7598d446426996e 251 Gene3D G3DSA:3.40.50.300 2 180 5.5E-29 T 13-10-2018 ambt_08900 b416c3a11c83a767c7598d446426996e 251 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 8 248 7.8E-67 T 13-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 ambt_08900 b416c3a11c83a767c7598d446426996e 251 Gene3D G3DSA:1.10.8.60 184 250 4.8E-18 T 13-10-2018 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 PIRSF PIRSF001415 1 332 3.8E-148 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 Pfam PF00490 Delta-aminolevulinic acid dehydratase 8 327 1.0E-138 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 Gene3D G3DSA:3.20.20.70 1 332 4.7E-144 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 303 322 7.5E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 273 288 7.5E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 125 139 7.5E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 194 213 7.5E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 156 175 7.5E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 248 264 7.5E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 248 260 - T 13-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 SMART SM01004 5 329 2.8E-232 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ambt_15885 c0671bbdef5542a6c17f123999090c86 332 SUPERFAMILY SSF51569 4 330 9.82E-141 T 13-10-2018 ambt_06015 a157b2a4a3d1223e2a9bd70f97143f19 279 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.0E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06015 a157b2a4a3d1223e2a9bd70f97143f19 279 SUPERFAMILY SSF53850 87 259 1.12E-11 T 13-10-2018 ambt_06015 a157b2a4a3d1223e2a9bd70f97143f19 279 SUPERFAMILY SSF46785 1 83 9.02E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_06015 a157b2a4a3d1223e2a9bd70f97143f19 279 Gene3D G3DSA:3.40.190.10 93 269 7.5E-9 T 13-10-2018 ambt_06015 a157b2a4a3d1223e2a9bd70f97143f19 279 Gene3D G3DSA:1.10.10.10 1 90 3.4E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_06015 a157b2a4a3d1223e2a9bd70f97143f19 279 Pfam PF03466 LysR substrate binding domain 93 259 6.3E-9 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_06015 a157b2a4a3d1223e2a9bd70f97143f19 279 Gene3D G3DSA:3.40.190.10 158 246 7.5E-9 T 13-10-2018 ambt_06015 a157b2a4a3d1223e2a9bd70f97143f19 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06015 a157b2a4a3d1223e2a9bd70f97143f19 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06015 a157b2a4a3d1223e2a9bd70f97143f19 279 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_08095 14887547bcd60e67d5608f76a3e1bbba 588 Pfam PF11949 Protein of unknown function (DUF3466) 6 585 1.5E-75 T 13-10-2018 IPR022562 Protein of unknown function DUF3466 ambt_19275 56489516589e45a184648712044513e0 274 Gene3D G3DSA:3.40.190.10 107 207 1.1E-36 T 13-10-2018 ambt_19275 56489516589e45a184648712044513e0 274 SUPERFAMILY SSF53850 24 241 1.71E-23 T 13-10-2018 ambt_19275 56489516589e45a184648712044513e0 274 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 28 258 1.7E-54 T 13-10-2018 ambt_19275 56489516589e45a184648712044513e0 274 Gene3D G3DSA:3.40.190.10 29 238 1.1E-36 T 13-10-2018 ambt_03265 14e13b12ceb9e4a2fb90141923f80cf2 305 SUPERFAMILY SSF56059 81 283 1.08E-36 T 13-10-2018 ambt_03265 14e13b12ceb9e4a2fb90141923f80cf2 305 Gene3D G3DSA:3.30.470.20 176 287 1.0E-24 T 13-10-2018 ambt_03265 14e13b12ceb9e4a2fb90141923f80cf2 305 Gene3D G3DSA:3.30.1490.20 91 172 4.9E-9 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ambt_03265 14e13b12ceb9e4a2fb90141923f80cf2 305 Pfam PF08443 RimK-like ATP-grasp domain 90 263 7.0E-20 T 13-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 ambt_08480 280623ab534085dbc0ed0f1071ff8241 376 SUPERFAMILY SSF52283 1 360 3.15E-66 T 13-10-2018 ambt_08480 280623ab534085dbc0ed0f1071ff8241 376 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 13-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 ambt_08480 280623ab534085dbc0ed0f1071ff8241 376 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 374 1.1E-153 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 ambt_08480 280623ab534085dbc0ed0f1071ff8241 376 SMART SM01002 149 297 1.3E-89 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ambt_08480 280623ab534085dbc0ed0f1071ff8241 376 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.1E-47 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ambt_08480 280623ab534085dbc0ed0f1071ff8241 376 PIRSF PIRSF000183 1 375 5.1E-151 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 ambt_08480 280623ab534085dbc0ed0f1071ff8241 376 Gene3D G3DSA:3.40.50.720 3 353 6.8E-137 T 13-10-2018 ambt_08480 280623ab534085dbc0ed0f1071ff8241 376 SMART SM01003 4 137 5.8E-79 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ambt_08480 280623ab534085dbc0ed0f1071ff8241 376 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 8.3E-83 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ambt_08480 280623ab534085dbc0ed0f1071ff8241 376 Gene3D G3DSA:3.40.50.720 130 305 6.8E-137 T 13-10-2018 ambt_08480 280623ab534085dbc0ed0f1071ff8241 376 SUPERFAMILY SSF51735 137 303 5.76E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_08005 786acb38456a1d78066d3173674c04d9 246 Pfam PF04402 Protein of unknown function (DUF541) 47 242 2.8E-36 T 13-10-2018 IPR007497 Protein of unknown function DUF541 ambt_08005 786acb38456a1d78066d3173674c04d9 246 Gene3D G3DSA:3.30.110.170 49 242 5.4E-43 T 13-10-2018 ambt_08005 786acb38456a1d78066d3173674c04d9 246 Gene3D G3DSA:3.30.70.2970 59 165 5.4E-43 T 13-10-2018 ambt_07615 5e35e987e5f62ab4898995324c355218 103 Gene3D G3DSA:2.40.170.20 1 103 1.9E-9 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_07615 5e35e987e5f62ab4898995324c355218 103 SUPERFAMILY SSF56935 5 103 1.33E-9 T 13-10-2018 ambt_07615 5e35e987e5f62ab4898995324c355218 103 Pfam PF00593 TonB dependent receptor 32 102 8.8E-8 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_11780 da9a8ae3bc2f5c88c032281ac6ef1935 600 Gene3D G3DSA:1.20.1560.10 22 344 2.2E-108 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_11780 da9a8ae3bc2f5c88c032281ac6ef1935 600 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_11780 da9a8ae3bc2f5c88c032281ac6ef1935 600 SMART SM00382 379 559 2.0E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_11780 da9a8ae3bc2f5c88c032281ac6ef1935 600 SUPERFAMILY SSF52540 343 589 5.03E-92 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_11780 da9a8ae3bc2f5c88c032281ac6ef1935 600 SUPERFAMILY SSF90123 20 340 9.94E-61 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ambt_11780 da9a8ae3bc2f5c88c032281ac6ef1935 600 Pfam PF00664 ABC transporter transmembrane region 34 308 3.7E-41 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ambt_11780 da9a8ae3bc2f5c88c032281ac6ef1935 600 Gene3D G3DSA:3.40.50.300 345 599 4.4E-95 T 13-10-2018 ambt_11780 da9a8ae3bc2f5c88c032281ac6ef1935 600 Pfam PF00005 ABC transporter 370 519 1.3E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_01830 7ad490aa507da082906106b9b4a0d8f3 110 SUPERFAMILY SSF52980 5 106 4.83E-21 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ambt_01830 7ad490aa507da082906106b9b4a0d8f3 110 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 2 108 7.4E-22 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 ambt_01830 7ad490aa507da082906106b9b4a0d8f3 110 Pfam PF02021 Uncharacterised protein family UPF0102 6 98 6.1E-25 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 ambt_01830 7ad490aa507da082906106b9b4a0d8f3 110 Hamap MF_00048 UPF0102 protein YraN [yraN]. 1 110 16.027 T 13-10-2018 IPR003509 Uncharacterised protein family UPF0102 ambt_01830 7ad490aa507da082906106b9b4a0d8f3 110 Gene3D G3DSA:3.40.1350.10 5 110 3.7E-27 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 ambt_09700 80f6920d12a40b441e40be133c0e9020 388 Gene3D G3DSA:2.60.120.650 2 210 6.0E-77 T 13-10-2018 ambt_09700 80f6920d12a40b441e40be133c0e9020 388 SUPERFAMILY SSF51197 3 289 2.2E-67 T 13-10-2018 ambt_09700 80f6920d12a40b441e40be133c0e9020 388 SMART SM00558 98 225 2.7E-9 T 13-10-2018 IPR003347 JmjC domain ambt_09700 80f6920d12a40b441e40be133c0e9020 388 Pfam PF08007 Cupin superfamily protein 7 279 9.7E-77 T 13-10-2018 IPR003347 JmjC domain ambt_09700 80f6920d12a40b441e40be133c0e9020 388 Gene3D G3DSA:1.10.10.2510 213 386 2.6E-18 T 13-10-2018 ambt_11175 312f180fe2600888fb07f25de2c98ca0 306 PIRSF PIRSF010376 20 294 1.8E-85 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ambt_11175 312f180fe2600888fb07f25de2c98ca0 306 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 22 293 1.8E-89 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ambt_11175 312f180fe2600888fb07f25de2c98ca0 306 Pfam PF08544 GHMP kinases C terminal 222 276 1.1E-6 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain ambt_11175 312f180fe2600888fb07f25de2c98ca0 306 Gene3D G3DSA:3.30.230.10 7 174 1.8E-54 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_11175 312f180fe2600888fb07f25de2c98ca0 306 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 20 281 31.858 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ambt_11175 312f180fe2600888fb07f25de2c98ca0 306 Pfam PF00288 GHMP kinases N terminal domain 103 159 1.3E-8 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 ambt_11175 312f180fe2600888fb07f25de2c98ca0 306 Gene3D G3DSA:3.30.70.890 176 294 1.8E-32 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ambt_11175 312f180fe2600888fb07f25de2c98ca0 306 SUPERFAMILY SSF54211 21 173 9.11E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_11175 312f180fe2600888fb07f25de2c98ca0 306 SUPERFAMILY SSF55060 177 292 1.97E-35 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ambt_02420 25399d69e080ea0d7e96c726d31e500c 452 SUPERFAMILY SSF55920 176 434 3.14E-85 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like ambt_02420 25399d69e080ea0d7e96c726d31e500c 452 Pfam PF00557 Metallopeptidase family M24 182 413 3.4E-67 T 13-10-2018 IPR000994 Peptidase M24 ambt_02420 25399d69e080ea0d7e96c726d31e500c 452 SMART SM01011 2 138 9.2E-47 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ambt_02420 25399d69e080ea0d7e96c726d31e500c 452 Gene3D G3DSA:3.40.350.10 2 172 2.1E-47 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ambt_02420 25399d69e080ea0d7e96c726d31e500c 452 Gene3D G3DSA:3.90.230.10 174 444 1.6E-101 T 13-10-2018 ambt_02420 25399d69e080ea0d7e96c726d31e500c 452 SUPERFAMILY SSF53092 1 175 3.31E-43 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ambt_02420 25399d69e080ea0d7e96c726d31e500c 452 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ambt_02420 25399d69e080ea0d7e96c726d31e500c 452 Pfam PF05195 Aminopeptidase P, N-terminal domain 7 128 5.7E-31 T 13-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ambt_02420 25399d69e080ea0d7e96c726d31e500c 452 PRINTS PR00599 Methionine aminopeptidase-1 signature 372 384 8.0E-6 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_02420 25399d69e080ea0d7e96c726d31e500c 452 PRINTS PR00599 Methionine aminopeptidase-1 signature 254 270 8.0E-6 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ambt_17825 49c2f6734e0e2cc3e1588d13cafefd2d 202 Gene3D G3DSA:1.20.1050.10 83 188 1.5E-63 T 13-10-2018 ambt_17825 49c2f6734e0e2cc3e1588d13cafefd2d 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 112 189 1.4E-11 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_17825 49c2f6734e0e2cc3e1588d13cafefd2d 202 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 1.6E-10 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_17825 49c2f6734e0e2cc3e1588d13cafefd2d 202 Gene3D G3DSA:3.40.30.10 3 195 1.5E-63 T 13-10-2018 ambt_17825 49c2f6734e0e2cc3e1588d13cafefd2d 202 SUPERFAMILY SSF47616 81 199 1.53E-25 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_17825 49c2f6734e0e2cc3e1588d13cafefd2d 202 SUPERFAMILY SSF52833 1 79 8.24E-19 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_03505 220f9341d71d6ea3409f975d9c0d0271 175 SUPERFAMILY SSF56925 21 175 2.43E-12 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ambt_03505 220f9341d71d6ea3409f975d9c0d0271 175 Gene3D G3DSA:2.40.160.20 19 175 1.5E-12 T 13-10-2018 ambt_06515 7431205d423c2ce773f894e97376d46c 257 SUPERFAMILY SSF52266 17 246 2.29E-32 T 13-10-2018 ambt_06515 7431205d423c2ce773f894e97376d46c 257 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 27 233 3.2E-20 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain ambt_06515 7431205d423c2ce773f894e97376d46c 257 Gene3D G3DSA:3.40.50.1110 14 242 2.7E-22 T 13-10-2018 IPR036514 SGNH hydrolase superfamily ambt_19835 4f1cf9892e8f92faa9bbc45ad7a1c7f3 359 Gene3D G3DSA:3.40.50.1400 179 317 4.0E-99 T 13-10-2018 ambt_19835 4f1cf9892e8f92faa9bbc45ad7a1c7f3 359 Hamap MF_00323 Ferrochelatase [hemH]. 15 336 38.962 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ambt_19835 4f1cf9892e8f92faa9bbc45ad7a1c7f3 359 ProSitePatterns PS00534 Ferrochelatase signature. 205 223 - T 13-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ambt_19835 4f1cf9892e8f92faa9bbc45ad7a1c7f3 359 Gene3D G3DSA:3.40.50.1400 18 336 4.0E-99 T 13-10-2018 ambt_19835 4f1cf9892e8f92faa9bbc45ad7a1c7f3 359 TIGRFAM TIGR00109 hemH: ferrochelatase 14 336 7.9E-104 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ambt_19835 4f1cf9892e8f92faa9bbc45ad7a1c7f3 359 SUPERFAMILY SSF53800 14 341 1.41E-114 T 13-10-2018 ambt_19835 4f1cf9892e8f92faa9bbc45ad7a1c7f3 359 Pfam PF00762 Ferrochelatase 16 335 3.4E-118 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ambt_11615 7bddc8332cfbedd3a2d23f82304bcdb2 255 SUPERFAMILY SSF53850 25 235 1.78E-8 T 13-10-2018 ambt_12615 367a1cc8cbe844e327f4e29b5bbeb391 356 Pfam PF16344 Domain of unknown function (DUF4974) 253 346 2.0E-10 T 13-10-2018 IPR032508 Protein FecR, C-terminal ambt_12615 367a1cc8cbe844e327f4e29b5bbeb391 356 Gene3D G3DSA:3.55.50.30 278 354 1.3E-8 T 13-10-2018 ambt_12615 367a1cc8cbe844e327f4e29b5bbeb391 356 Pfam PF04773 FecR protein 129 221 3.3E-19 T 13-10-2018 IPR006860 FecR protein ambt_12615 367a1cc8cbe844e327f4e29b5bbeb391 356 Gene3D G3DSA:2.60.120.1440 116 257 3.1E-27 T 13-10-2018 ambt_12615 367a1cc8cbe844e327f4e29b5bbeb391 356 PIRSF PIRSF018266 5 355 7.4E-71 T 13-10-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component ambt_12615 367a1cc8cbe844e327f4e29b5bbeb391 356 Pfam PF16220 Domain of unknown function (DUF4880) 15 55 2.5E-7 T 13-10-2018 IPR032623 FecR, N-terminal ambt_05345 975b008edb8ea334fb0e3f4c59f0dd84 615 Gene3D G3DSA:3.40.50.300 386 581 1.3E-19 T 13-10-2018 ambt_05345 975b008edb8ea334fb0e3f4c59f0dd84 615 Pfam PF12696 TraM recognition site of TraD and TraG 438 563 1.0E-8 T 13-10-2018 IPR032689 TraD/TraG, TraM recognition site ambt_05345 975b008edb8ea334fb0e3f4c59f0dd84 615 SUPERFAMILY SSF52540 204 587 1.91E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_05345 975b008edb8ea334fb0e3f4c59f0dd84 615 PIRSF PIRSF003273 76 612 2.3E-55 T 13-10-2018 IPR016387 Mobilization, MobA ambt_00845 221fc7f0fdca67eefdc5c8dd1f7aae2f 194 SUPERFAMILY SSF103039 7 190 5.36E-36 T 13-10-2018 IPR028976 CheC-like superfamily ambt_00845 221fc7f0fdca67eefdc5c8dd1f7aae2f 194 Pfam PF13690 Chemotaxis phosphatase CheX 69 159 1.4E-6 T 13-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain ambt_00845 221fc7f0fdca67eefdc5c8dd1f7aae2f 194 Pfam PF04509 CheC-like family 10 45 2.6E-9 T 13-10-2018 IPR007597 CheC-like protein GO:0016787 ambt_00845 221fc7f0fdca67eefdc5c8dd1f7aae2f 194 Gene3D G3DSA:3.40.1550.10 5 190 2.8E-39 T 13-10-2018 IPR028976 CheC-like superfamily ambt_19285 5e84c5444b0300c26bb91379f7c94072 442 Pfam PF00072 Response regulator receiver domain 14 125 1.2E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_19285 5e84c5444b0300c26bb91379f7c94072 442 SUPERFAMILY SSF109604 203 356 9.57E-6 T 13-10-2018 ambt_19285 5e84c5444b0300c26bb91379f7c94072 442 Gene3D G3DSA:3.40.50.2300 2 153 4.5E-32 T 13-10-2018 ambt_19285 5e84c5444b0300c26bb91379f7c94072 442 SUPERFAMILY SSF52172 12 178 7.26E-33 T 13-10-2018 IPR011006 CheY-like superfamily ambt_19285 5e84c5444b0300c26bb91379f7c94072 442 Pfam PF13487 HD domain 251 310 3.8E-7 T 13-10-2018 ambt_19285 5e84c5444b0300c26bb91379f7c94072 442 Gene3D G3DSA:1.10.3210.10 173 363 2.9E-24 T 13-10-2018 ambt_19285 5e84c5444b0300c26bb91379f7c94072 442 SMART SM00448 12 124 1.2E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_11170 7906b6997c4e6a92e127b96f041289cc 206 Pfam PF03550 Outer membrane lipoprotein LolB 43 203 1.5E-37 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 ambt_11170 7906b6997c4e6a92e127b96f041289cc 206 Gene3D G3DSA:2.50.20.10 23 205 6.4E-42 T 13-10-2018 ambt_11170 7906b6997c4e6a92e127b96f041289cc 206 SUPERFAMILY SSF89392 17 204 2.0E-34 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX ambt_11170 7906b6997c4e6a92e127b96f041289cc 206 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 4 204 2.6E-30 T 13-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 ambt_08750 7dba30e418a2a7a733c2840f9669e713 225 Pfam PF13643 Domain of unknown function (DUF4145) 113 199 3.1E-10 T 13-10-2018 IPR025285 Domain of unknown function DUF4145 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 SUPERFAMILY SSF53187 3 292 1.29E-68 T 13-10-2018 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 56 78 - T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 Gene3D G3DSA:2.60.40.10 769 870 2.7E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 SUPERFAMILY SSF49265 299 793 6.95E-8 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 SMART SM00631 5 280 1.3E-49 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 135 143 1.0E-7 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 31 43 1.0E-7 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 56 70 1.0E-7 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 Pfam PF00246 Zinc carboxypeptidase 13 264 1.9E-55 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 SMART SM00060 300 380 0.029 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 SMART SM00060 768 850 70.0 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 Gene3D G3DSA:3.40.630.10 1 299 1.1E-75 T 13-10-2018 ambt_03255 abfcb49a5d7582c8d81e2c10941d9754 884 Gene3D G3DSA:2.60.40.10 300 398 1.4E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_11640 cce8ae1bca8c1cefb949076951a1dec4 267 SUPERFAMILY SSF89550 3 248 1.65E-36 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ambt_11640 cce8ae1bca8c1cefb949076951a1dec4 267 Gene3D G3DSA:1.10.150.650 71 142 6.8E-66 T 13-10-2018 ambt_11640 cce8ae1bca8c1cefb949076951a1dec4 267 Gene3D G3DSA:3.20.20.140 2 223 6.8E-66 T 13-10-2018 ambt_04750 ff2bfd770c0d6071ac644367cea51252 259 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 51 221 4.0E-27 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 ambt_04750 ff2bfd770c0d6071ac644367cea51252 259 Pfam PF03843 Outer membrane lipoprotein Slp family 60 215 1.7E-43 T 13-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 ambt_10540 908ce24429cbd6bbaa3c7b2b8187d647 312 Pfam PF00535 Glycosyl transferase family 2 9 141 1.4E-33 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_10540 908ce24429cbd6bbaa3c7b2b8187d647 312 SUPERFAMILY SSF53448 6 224 8.7E-60 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_10540 908ce24429cbd6bbaa3c7b2b8187d647 312 Gene3D G3DSA:3.90.550.10 1 253 5.2E-77 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_15655 787913b21648c8e545fbc48d84afac0b 140 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 3 114 3.8E-20 T 13-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component ambt_15655 787913b21648c8e545fbc48d84afac0b 140 Pfam PF13470 PIN domain 3 116 3.6E-19 T 13-10-2018 IPR002716 PIN domain ambt_15655 787913b21648c8e545fbc48d84afac0b 140 SUPERFAMILY SSF88723 1 121 6.17E-12 T 13-10-2018 IPR029060 PIN-like domain superfamily ambt_15655 787913b21648c8e545fbc48d84afac0b 140 SMART SM00670 2 120 1.9E-8 T 13-10-2018 IPR002716 PIN domain ambt_15240 cccd28be07c9323c372b3c8498a69639 814 Pfam PF00593 TonB dependent receptor 381 811 3.8E-38 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_15240 cccd28be07c9323c372b3c8498a69639 814 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 221 5.6E-18 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_15240 cccd28be07c9323c372b3c8498a69639 814 SUPERFAMILY SSF49464 24 108 6.08E-13 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ambt_15240 cccd28be07c9323c372b3c8498a69639 814 SUPERFAMILY SSF56935 103 812 1.21E-97 T 13-10-2018 ambt_15240 cccd28be07c9323c372b3c8498a69639 814 Gene3D G3DSA:2.170.130.10 108 230 5.6E-28 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_15240 cccd28be07c9323c372b3c8498a69639 814 Pfam PF13620 Carboxypeptidase regulatory-like domain 24 77 1.4E-10 T 13-10-2018 ambt_15240 cccd28be07c9323c372b3c8498a69639 814 Gene3D G3DSA:2.60.40.1120 23 100 7.5E-11 T 13-10-2018 ambt_03605 e447a146c1f9a7c7642ddf00f2551cd1 387 SUPERFAMILY SSF53756 1 384 2.98E-73 T 13-10-2018 ambt_03605 e447a146c1f9a7c7642ddf00f2551cd1 387 Pfam PF13439 Glycosyltransferase Family 4 16 190 7.5E-13 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ambt_03605 e447a146c1f9a7c7642ddf00f2551cd1 387 Gene3D G3DSA:3.40.50.2000 194 364 1.8E-41 T 13-10-2018 ambt_03605 e447a146c1f9a7c7642ddf00f2551cd1 387 Gene3D G3DSA:3.40.50.2000 1 193 1.5E-20 T 13-10-2018 ambt_03605 e447a146c1f9a7c7642ddf00f2551cd1 387 Pfam PF00534 Glycosyl transferases group 1 199 361 5.7E-33 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_19065 c20029a67f89b1b12697d19b45abcde4 37 SUPERFAMILY SSF57840 1 37 9.94E-17 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19065 c20029a67f89b1b12697d19b45abcde4 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19065 c20029a67f89b1b12697d19b45abcde4 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.8E-23 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19065 c20029a67f89b1b12697d19b45abcde4 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19065 c20029a67f89b1b12697d19b45abcde4 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 5.0E-9 T 13-10-2018 ambt_19065 c20029a67f89b1b12697d19b45abcde4 37 Pfam PF00444 Ribosomal protein L36 1 37 5.8E-19 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_21170 a41e16f18ff3ee3dd089ad343ee00b6f 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 284 1.5E-96 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ambt_21170 a41e16f18ff3ee3dd089ad343ee00b6f 293 SUPERFAMILY SSF53335 65 271 2.81E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_21170 a41e16f18ff3ee3dd089ad343ee00b6f 293 PIRSF PIRSF000401 1 293 3.7E-90 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ambt_21170 a41e16f18ff3ee3dd089ad343ee00b6f 293 Gene3D G3DSA:3.40.50.150 101 292 1.9E-56 T 13-10-2018 ambt_21170 a41e16f18ff3ee3dd089ad343ee00b6f 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 291 32.101 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ambt_21170 a41e16f18ff3ee3dd089ad343ee00b6f 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 291 2.0E-96 T 13-10-2018 ambt_06995 feddff7631de0c0f2e76c87725564d66 354 Pfam PF00589 Phage integrase family 181 347 1.4E-19 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_06995 feddff7631de0c0f2e76c87725564d66 354 SUPERFAMILY SSF56349 76 352 2.21E-55 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_06995 feddff7631de0c0f2e76c87725564d66 354 Gene3D G3DSA:1.10.443.10 166 354 1.2E-35 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_06995 feddff7631de0c0f2e76c87725564d66 354 Gene3D G3DSA:1.10.150.130 75 165 1.2E-16 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_06995 feddff7631de0c0f2e76c87725564d66 354 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 76 131 5.2E-6 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 SUPERFAMILY SSF81296 344 458 1.19E-29 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 SUPERFAMILY SSF56524 96 330 6.28E-55 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 Gene3D G3DSA:2.60.40.650 343 459 4.0E-31 T 13-10-2018 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 Pfam PF00174 Oxidoreductase molybdopterin binding domain 144 312 1.3E-43 T 13-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 Gene3D G3DSA:3.90.420.10 83 338 1.9E-65 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 340 458 6.0E-16 T 13-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 PRINTS PR00407 Eukaryotic molybdopterin domain signature 260 276 5.4E-19 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 PRINTS PR00407 Eukaryotic molybdopterin domain signature 341 353 5.4E-19 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 PRINTS PR00407 Eukaryotic molybdopterin domain signature 102 116 5.4E-19 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 PRINTS PR00407 Eukaryotic molybdopterin domain signature 439 452 5.4E-19 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 PRINTS PR00407 Eukaryotic molybdopterin domain signature 181 192 5.4E-19 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 PRINTS PR00407 Eukaryotic molybdopterin domain signature 122 138 5.4E-19 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 PRINTS PR00407 Eukaryotic molybdopterin domain signature 293 306 5.4E-19 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 PRINTS PR00407 Eukaryotic molybdopterin domain signature 277 290 5.4E-19 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ambt_20080 300bf9b28bc89077fde1bf49250c655d 459 PRINTS PR00407 Eukaryotic molybdopterin domain signature 380 392 5.4E-19 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 ambt_01100 6b7b5070b39708d05fbc8202b6a7f7c0 505 Pfam PF00171 Aldehyde dehydrogenase family 27 492 3.4E-164 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_01100 6b7b5070b39708d05fbc8202b6a7f7c0 505 Gene3D G3DSA:3.40.309.10 270 500 3.5E-70 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ambt_01100 6b7b5070b39708d05fbc8202b6a7f7c0 505 Gene3D G3DSA:3.40.605.10 18 269 3.3E-95 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_01100 6b7b5070b39708d05fbc8202b6a7f7c0 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ambt_01100 6b7b5070b39708d05fbc8202b6a7f7c0 505 SUPERFAMILY SSF53720 15 496 4.58E-162 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_01100 6b7b5070b39708d05fbc8202b6a7f7c0 505 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ambt_11790 a01e0bbd0760bc7eea58f5aa0f9fd990 339 Pfam PF07690 Major Facilitator Superfamily 1 292 1.9E-27 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_11790 a01e0bbd0760bc7eea58f5aa0f9fd990 339 SUPERFAMILY SSF103473 2 329 3.4E-39 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_11790 a01e0bbd0760bc7eea58f5aa0f9fd990 339 Gene3D G3DSA:1.20.1250.20 1 323 3.0E-34 T 13-10-2018 ambt_05485 8cc3c450c8bc9b945fa4e16ca5872abb 479 SUPERFAMILY SSF56300 134 358 1.77E-9 T 13-10-2018 ambt_14410 a1f4c2c138e036b8d0dfe38b1dbeaa64 175 PIRSF PIRSF016487 2 159 1.4E-28 T 13-10-2018 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like ambt_14410 a1f4c2c138e036b8d0dfe38b1dbeaa64 175 SUPERFAMILY SSF55154 6 152 1.01E-21 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 ambt_14410 a1f4c2c138e036b8d0dfe38b1dbeaa64 175 SMART SM01118 4 152 8.5E-4 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 ambt_14410 a1f4c2c138e036b8d0dfe38b1dbeaa64 175 Gene3D G3DSA:2.40.320.10 2 153 1.5E-39 T 13-10-2018 ambt_07310 e5f2e8e99c24e24b30a5c4aa67904ebd 138 SUPERFAMILY SSF81324 28 136 2.62E-6 T 13-10-2018 ambt_07310 e5f2e8e99c24e24b30a5c4aa67904ebd 138 Gene3D G3DSA:1.10.287.70 35 137 2.7E-6 T 13-10-2018 ambt_22145 5ef54ffbd60b10825e1bd19cd66a85df 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 7 85 7.5E-29 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22145 5ef54ffbd60b10825e1bd19cd66a85df 138 SUPERFAMILY SSF51344 4 87 8.63E-24 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22145 5ef54ffbd60b10825e1bd19cd66a85df 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 7.0E-11 T 13-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain ambt_22145 5ef54ffbd60b10825e1bd19cd66a85df 138 SUPERFAMILY SSF46604 89 138 7.06E-14 T 13-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22145 5ef54ffbd60b10825e1bd19cd66a85df 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 21.02 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22145 5ef54ffbd60b10825e1bd19cd66a85df 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 133 1.8E-45 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22145 5ef54ffbd60b10825e1bd19cd66a85df 138 Gene3D G3DSA:2.60.15.10 4 91 4.5E-31 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22145 5ef54ffbd60b10825e1bd19cd66a85df 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 6.0E-32 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22145 5ef54ffbd60b10825e1bd19cd66a85df 138 Gene3D G3DSA:1.20.5.440 92 134 3.2E-14 T 13-10-2018 ambt_00015 9d0fbccfb96fdd686e8d8221bb9b5b7f 362 SUPERFAMILY SSF52540 1 342 2.54E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00015 9d0fbccfb96fdd686e8d8221bb9b5b7f 362 ProSitePatterns PS00618 RecF protein signature 2. 301 319 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 ambt_00015 9d0fbccfb96fdd686e8d8221bb9b5b7f 362 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 362 82.179 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 ambt_00015 9d0fbccfb96fdd686e8d8221bb9b5b7f 362 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 346 5.7E-26 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ambt_00015 9d0fbccfb96fdd686e8d8221bb9b5b7f 362 Gene3D G3DSA:1.20.1050.90 121 300 1.0E-83 T 13-10-2018 ambt_00015 9d0fbccfb96fdd686e8d8221bb9b5b7f 362 Gene3D G3DSA:3.40.50.300 7 335 1.0E-83 T 13-10-2018 ambt_00015 9d0fbccfb96fdd686e8d8221bb9b5b7f 362 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 358 9.4E-95 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 ambt_20060 77f9e63ee77fbe9b862fe56c1cdd73f3 647 Gene3D G3DSA:2.40.170.20 148 647 3.0E-52 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_20060 77f9e63ee77fbe9b862fe56c1cdd73f3 647 SUPERFAMILY SSF56935 29 647 2.52E-88 T 13-10-2018 ambt_20060 77f9e63ee77fbe9b862fe56c1cdd73f3 647 Gene3D G3DSA:2.170.130.10 24 147 1.5E-32 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_20060 77f9e63ee77fbe9b862fe56c1cdd73f3 647 Pfam PF00593 TonB dependent receptor 202 646 5.7E-36 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_20060 77f9e63ee77fbe9b862fe56c1cdd73f3 647 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 146 9.2E-23 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 Gene3D G3DSA:3.10.290.10 327 398 2.7E-18 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-23 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-23 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-23 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-23 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 398 6.3E-126 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 Gene3D G3DSA:1.10.240.10 218 326 4.9E-35 T 13-10-2018 ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 Pfam PF00579 tRNA synthetases class I (W and Y) 31 317 1.1E-78 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 Gene3D G3DSA:3.40.50.620 5 217 5.0E-72 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 SUPERFAMILY SSF55174 320 398 8.24E-18 T 13-10-2018 ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 398 48.219 T 13-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 ambt_01630 0c1f8e33e293e5d30858ae174a802bc2 399 SUPERFAMILY SSF52374 8 315 5.18E-95 T 13-10-2018 ambt_00585 c1e0db890f7e6b0ce5558058fd59d93f 352 PRINTS PR00735 Glycosyl hydrolase family 8 signature 120 138 2.5E-23 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ambt_00585 c1e0db890f7e6b0ce5558058fd59d93f 352 PRINTS PR00735 Glycosyl hydrolase family 8 signature 188 205 2.5E-23 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ambt_00585 c1e0db890f7e6b0ce5558058fd59d93f 352 PRINTS PR00735 Glycosyl hydrolase family 8 signature 334 348 2.5E-23 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ambt_00585 c1e0db890f7e6b0ce5558058fd59d93f 352 PRINTS PR00735 Glycosyl hydrolase family 8 signature 60 73 2.5E-23 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ambt_00585 c1e0db890f7e6b0ce5558058fd59d93f 352 PRINTS PR00735 Glycosyl hydrolase family 8 signature 229 240 2.5E-23 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ambt_00585 c1e0db890f7e6b0ce5558058fd59d93f 352 PRINTS PR00735 Glycosyl hydrolase family 8 signature 253 262 2.5E-23 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ambt_00585 c1e0db890f7e6b0ce5558058fd59d93f 352 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 120 138 - T 13-10-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ambt_00585 c1e0db890f7e6b0ce5558058fd59d93f 352 Pfam PF01270 Glycosyl hydrolases family 8 21 346 1.3E-70 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ambt_00585 c1e0db890f7e6b0ce5558058fd59d93f 352 SUPERFAMILY SSF48208 13 346 1.42E-77 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 ambt_00585 c1e0db890f7e6b0ce5558058fd59d93f 352 Gene3D G3DSA:1.50.10.10 22 351 2.5E-105 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 ambt_17410 fa457fb69d57fb1b821d1487d9bf69c7 499 SUPERFAMILY SSF53067 3 252 2.59E-21 T 13-10-2018 ambt_17410 fa457fb69d57fb1b821d1487d9bf69c7 499 Gene3D G3DSA:3.30.420.40 485 494 8.9E-10 T 13-10-2018 ambt_17410 fa457fb69d57fb1b821d1487d9bf69c7 499 Gene3D G3DSA:3.30.420.40 127 255 1.6E-21 T 13-10-2018 ambt_17410 fa457fb69d57fb1b821d1487d9bf69c7 499 Pfam PF00012 Hsp70 protein 179 309 6.2E-8 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ambt_17410 fa457fb69d57fb1b821d1487d9bf69c7 499 Gene3D G3DSA:3.90.640.10 301 314 1.6E-21 T 13-10-2018 ambt_17410 fa457fb69d57fb1b821d1487d9bf69c7 499 Gene3D G3DSA:3.90.640.10 377 428 8.9E-10 T 13-10-2018 ambt_17410 fa457fb69d57fb1b821d1487d9bf69c7 499 SUPERFAMILY SSF53067 258 497 1.37E-25 T 13-10-2018 ambt_17410 fa457fb69d57fb1b821d1487d9bf69c7 499 Gene3D G3DSA:3.30.420.40 429 484 8.9E-10 T 13-10-2018 ambt_17410 fa457fb69d57fb1b821d1487d9bf69c7 499 Gene3D G3DSA:3.30.420.40 256 300 1.6E-21 T 13-10-2018 ambt_21795 2167edac9f42c0534e8661e02dffa75e 288 SUPERFAMILY SSF46785 1 86 6.0E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_21795 2167edac9f42c0534e8661e02dffa75e 288 Gene3D G3DSA:3.40.190.10 165 261 4.7E-32 T 13-10-2018 ambt_21795 2167edac9f42c0534e8661e02dffa75e 288 SUPERFAMILY SSF53850 88 284 1.38E-36 T 13-10-2018 ambt_21795 2167edac9f42c0534e8661e02dffa75e 288 Gene3D G3DSA:3.40.190.10 90 284 4.7E-32 T 13-10-2018 ambt_21795 2167edac9f42c0534e8661e02dffa75e 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.9E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_21795 2167edac9f42c0534e8661e02dffa75e 288 Pfam PF03466 LysR substrate binding domain 87 284 2.1E-39 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_21795 2167edac9f42c0534e8661e02dffa75e 288 Gene3D G3DSA:1.10.10.10 1 83 1.5E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_20925 aab00ad965f2d42c6aa01e94d79e2f3d 350 Gene3D G3DSA:2.40.128.140 48 341 3.2E-55 T 13-10-2018 IPR037107 Putative outer membrane protein superfamily ambt_20925 aab00ad965f2d42c6aa01e94d79e2f3d 350 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 51 348 1.1E-81 T 13-10-2018 IPR018707 Protein of unknown function DUF2219 ambt_20225 d212549121b4a57129bf420e0ab2a807 148 Pfam PF11220 Protein of unknown function (DUF3015) 31 146 1.1E-10 T 13-10-2018 IPR021383 Protein of unknown function DUF3015 ambt_07770 7396de3c2c9aed22dae49dbda372b124 505 Pfam PF11893 Domain of unknown function (DUF3413) 8 256 4.7E-81 T 13-10-2018 IPR024588 Inner membrane protein YejM, N-terminal ambt_07770 7396de3c2c9aed22dae49dbda372b124 505 SUPERFAMILY SSF53649 408 453 2.17E-5 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ambt_00610 f076c0317f76738b4b6748f834a32649 179 Pfam PF00258 Flavodoxin 10 169 9.8E-23 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ambt_00610 f076c0317f76738b4b6748f834a32649 179 SUPERFAMILY SSF52218 8 173 7.14E-44 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_00610 f076c0317f76738b4b6748f834a32649 179 PIRSF PIRSF038996 5 178 1.5E-54 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 ambt_00610 f076c0317f76738b4b6748f834a32649 179 TIGRFAM TIGR01752 flav_long: flavodoxin 8 175 7.9E-62 T 13-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 ambt_00610 f076c0317f76738b4b6748f834a32649 179 ProSitePatterns PS00201 Flavodoxin signature. 10 26 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 ambt_00610 f076c0317f76738b4b6748f834a32649 179 Gene3D G3DSA:3.40.50.360 6 178 1.9E-45 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_06760 96cb5a7530cc0c8a10a7159207895a54 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.8E-6 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ambt_06760 96cb5a7530cc0c8a10a7159207895a54 187 Pfam PF00578 AhpC/TSA family 8 133 1.5E-34 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ambt_06760 96cb5a7530cc0c8a10a7159207895a54 187 SUPERFAMILY SSF52833 1 186 2.34E-54 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_06760 96cb5a7530cc0c8a10a7159207895a54 187 Gene3D G3DSA:3.40.30.10 1 186 5.7E-61 T 13-10-2018 ambt_06760 96cb5a7530cc0c8a10a7159207895a54 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.9E-102 T 13-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ambt_06760 96cb5a7530cc0c8a10a7159207895a54 187 PIRSF PIRSF000239 1 187 1.2E-51 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ambt_19280 a03ed4b0f18c8ffc0fec74870f3b2d85 566 SUPERFAMILY SSF55874 391 549 2.23E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_19280 a03ed4b0f18c8ffc0fec74870f3b2d85 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 296 398 2.3E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_19280 a03ed4b0f18c8ffc0fec74870f3b2d85 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 445 549 8.8E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_19280 a03ed4b0f18c8ffc0fec74870f3b2d85 566 SUPERFAMILY SSF47384 290 328 3.92E-5 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_19280 a03ed4b0f18c8ffc0fec74870f3b2d85 566 SMART SM00387 440 551 6.0E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_19280 a03ed4b0f18c8ffc0fec74870f3b2d85 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 4.3E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_19280 a03ed4b0f18c8ffc0fec74870f3b2d85 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 494 4.3E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_19280 a03ed4b0f18c8ffc0fec74870f3b2d85 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 508 4.3E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_19280 a03ed4b0f18c8ffc0fec74870f3b2d85 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 548 4.3E-18 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_19280 a03ed4b0f18c8ffc0fec74870f3b2d85 566 Gene3D G3DSA:3.30.565.10 401 558 8.7E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_19280 a03ed4b0f18c8ffc0fec74870f3b2d85 566 Gene3D G3DSA:1.10.287.130 272 395 2.3E-23 T 13-10-2018 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 SMART SM00028 236 269 0.11 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 SMART SM00028 196 229 15.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 SMART SM00028 156 189 26.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 SMART SM00028 116 149 0.88 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 SUPERFAMILY SSF48452 191 390 2.94E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 Pfam PF00990 Diguanylate cyclase, GGDEF domain 495 666 8.8E-36 T 13-10-2018 IPR000160 GGDEF domain ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 Gene3D G3DSA:1.25.40.10 35 215 3.3E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 SUPERFAMILY SSF48452 76 231 4.05E-22 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 SMART SM00267 483 671 2.8E-34 T 13-10-2018 IPR000160 GGDEF domain ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 Pfam PF13424 Tetratricopeptide repeat 114 187 5.4E-9 T 13-10-2018 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 Pfam PF13424 Tetratricopeptide repeat 202 267 1.1E-9 T 13-10-2018 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 Gene3D G3DSA:1.25.40.10 216 496 1.4E-21 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 SUPERFAMILY SSF55073 499 669 4.0E-36 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 Gene3D G3DSA:3.30.70.270 497 675 1.2E-46 T 13-10-2018 ambt_02115 4634c7e786a59ae7f315db0eff5d190a 713 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 490 667 1.1E-37 T 13-10-2018 IPR000160 GGDEF domain ambt_00375 4327a4d8e9d19ee32d4a6a8476cdc472 300 Gene3D G3DSA:3.40.190.10 102 150 1.7E-8 T 13-10-2018 ambt_00375 4327a4d8e9d19ee32d4a6a8476cdc472 300 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 125 227 4.1E-7 T 13-10-2018 ambt_00375 4327a4d8e9d19ee32d4a6a8476cdc472 300 Gene3D G3DSA:3.40.190.10 151 230 1.7E-8 T 13-10-2018 ambt_00375 4327a4d8e9d19ee32d4a6a8476cdc472 300 SUPERFAMILY SSF53850 102 239 1.2E-7 T 13-10-2018 ambt_08350 b0126da6737e055bbe82949b0e7ad9f9 494 Gene3D G3DSA:3.40.640.10 161 397 9.0E-65 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_08350 b0126da6737e055bbe82949b0e7ad9f9 494 Gene3D G3DSA:3.90.1150.10 132 491 9.0E-65 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_08350 b0126da6737e055bbe82949b0e7ad9f9 494 Pfam PF00155 Aminotransferase class I and II 184 483 7.6E-24 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ambt_08350 b0126da6737e055bbe82949b0e7ad9f9 494 SUPERFAMILY SSF53383 127 491 1.46E-52 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_19515 3dcda6b6aa5ac79df32ea377bd6acf8b 542 Gene3D G3DSA:3.40.640.10 118 382 1.7E-97 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_19515 3dcda6b6aa5ac79df32ea377bd6acf8b 542 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 4 521 1.0E-256 T 13-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ambt_19515 3dcda6b6aa5ac79df32ea377bd6acf8b 542 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 60 436 1.1E-45 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 ambt_19515 3dcda6b6aa5ac79df32ea377bd6acf8b 542 SUPERFAMILY SSF53383 18 519 8.94E-100 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_19515 3dcda6b6aa5ac79df32ea377bd6acf8b 542 Gene3D G3DSA:3.90.1150.170 45 518 1.7E-97 T 13-10-2018 ambt_21485 07eb6a0a322e0a7728f4db5d4542c57c 186 SUPERFAMILY SSF56925 31 149 5.1E-9 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ambt_21485 07eb6a0a322e0a7728f4db5d4542c57c 186 Gene3D G3DSA:2.40.160.20 27 186 7.3E-7 T 13-10-2018 ambt_21485 07eb6a0a322e0a7728f4db5d4542c57c 186 Pfam PF13505 Outer membrane protein beta-barrel domain 11 171 3.2E-11 T 13-10-2018 IPR027385 Outer membrane protein beta-barrel ambt_13885 89e0bb59a142a7baeade4bf04c54859b 340 Gene3D G3DSA:3.40.50.720 4 275 9.6E-146 T 13-10-2018 ambt_13885 89e0bb59a142a7baeade4bf04c54859b 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 326 1.3E-58 T 13-10-2018 IPR016040 NAD(P)-binding domain ambt_13885 89e0bb59a142a7baeade4bf04c54859b 340 SUPERFAMILY SSF51735 1 337 9.94E-99 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_13885 89e0bb59a142a7baeade4bf04c54859b 340 Gene3D G3DSA:3.90.25.10 195 330 9.6E-146 T 13-10-2018 ambt_13885 89e0bb59a142a7baeade4bf04c54859b 340 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 336 9.1E-142 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 ambt_03225 4dee3e3ba3681bb45a4cb7aa37580af2 230 Pfam PF02630 SCO1/SenC 71 210 5.7E-13 T 13-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_03225 4dee3e3ba3681bb45a4cb7aa37580af2 230 Gene3D G3DSA:3.40.30.10 64 228 4.3E-40 T 13-10-2018 ambt_03225 4dee3e3ba3681bb45a4cb7aa37580af2 230 SUPERFAMILY SSF52833 69 227 3.74E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_02720 fdd44c90ffafa44898c93ff13f7c186d 275 Pfam PF02709 N-terminal domain of galactosyltransferase 160 205 9.5E-7 T 13-10-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 ambt_02720 fdd44c90ffafa44898c93ff13f7c186d 275 Gene3D G3DSA:3.90.550.10 1 214 2.2E-14 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_02720 fdd44c90ffafa44898c93ff13f7c186d 275 SUPERFAMILY SSF53448 6 236 4.28E-20 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_02285 865442e83213c5d7954dcce4dbf39fe5 139 Gene3D G3DSA:3.30.700.10 12 137 1.8E-27 T 13-10-2018 ambt_02285 865442e83213c5d7954dcce4dbf39fe5 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 32 1.4E-11 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_02285 865442e83213c5d7954dcce4dbf39fe5 139 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_02285 865442e83213c5d7954dcce4dbf39fe5 139 SUPERFAMILY SSF54523 12 130 2.46E-23 T 13-10-2018 ambt_02285 865442e83213c5d7954dcce4dbf39fe5 139 Pfam PF00114 Pilin (bacterial filament) 41 119 1.6E-5 T 13-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 ambt_02285 865442e83213c5d7954dcce4dbf39fe5 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 5.9E-11 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_03920 86f5eac5fc9ffe8e3ef317d0ec78a332 253 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 242 1.5E-108 T 13-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 ambt_03920 86f5eac5fc9ffe8e3ef317d0ec78a332 253 Pfam PF00005 ABC transporter 18 172 7.3E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_03920 86f5eac5fc9ffe8e3ef317d0ec78a332 253 SUPERFAMILY SSF52540 2 229 1.54E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_03920 86f5eac5fc9ffe8e3ef317d0ec78a332 253 Gene3D G3DSA:3.40.50.300 1 247 2.7E-60 T 13-10-2018 ambt_03920 86f5eac5fc9ffe8e3ef317d0ec78a332 253 SMART SM00382 26 229 4.5E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_04245 2343dfc0d209e99855de3bd0084070ec 284 Gene3D G3DSA:3.10.129.10 27 284 1.0E-58 T 13-10-2018 ambt_04245 2343dfc0d209e99855de3bd0084070ec 284 SUPERFAMILY SSF54637 176 282 8.78E-19 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_04245 2343dfc0d209e99855de3bd0084070ec 284 Pfam PF01575 MaoC like domain 174 259 6.2E-14 T 13-10-2018 IPR002539 MaoC-like dehydratase domain ambt_04245 2343dfc0d209e99855de3bd0084070ec 284 PRINTS PR01483 Fatty acid synthase signature 202 223 4.5E-6 T 13-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 ambt_04245 2343dfc0d209e99855de3bd0084070ec 284 PRINTS PR01483 Fatty acid synthase signature 180 202 4.5E-6 T 13-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 ambt_05305 404dd894d86edcca4f2f5c144cb9c1c0 467 Pfam PF13245 AAA domain 11 161 2.6E-8 T 13-10-2018 ambt_05305 404dd894d86edcca4f2f5c144cb9c1c0 467 Gene3D G3DSA:3.40.50.300 315 466 6.5E-8 T 13-10-2018 ambt_05305 404dd894d86edcca4f2f5c144cb9c1c0 467 SUPERFAMILY SSF52540 12 461 6.13E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_05305 404dd894d86edcca4f2f5c144cb9c1c0 467 Pfam PF13538 UvrD-like helicase C-terminal domain 422 457 1.2E-6 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain ambt_05305 404dd894d86edcca4f2f5c144cb9c1c0 467 Gene3D G3DSA:3.40.50.300 6 178 5.2E-23 T 13-10-2018 ambt_17505 d72b862beaa827b010c6524d0be4cad7 723 Gene3D G3DSA:3.40.50.300 282 637 1.3E-128 T 13-10-2018 ambt_17505 d72b862beaa827b010c6524d0be4cad7 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 721 0.0 T 13-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 ambt_17505 d72b862beaa827b010c6524d0be4cad7 723 Gene3D G3DSA:3.40.50.300 10 274 7.9E-102 T 13-10-2018 ambt_17505 d72b862beaa827b010c6524d0be4cad7 723 Gene3D G3DSA:1.10.10.160 114 187 7.9E-102 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily ambt_17505 d72b862beaa827b010c6524d0be4cad7 723 SUPERFAMILY SSF52540 6 643 4.6E-181 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_17505 d72b862beaa827b010c6524d0be4cad7 723 Gene3D G3DSA:1.10.486.10 383 539 1.3E-128 T 13-10-2018 ambt_17505 d72b862beaa827b010c6524d0be4cad7 723 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 2.1E-76 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ambt_17505 d72b862beaa827b010c6524d0be4cad7 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 2.0E-80 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 Gene3D G3DSA:3.40.50.460 144 260 4.1E-96 T 13-10-2018 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 Pfam PF00365 Phosphofructokinase 4 283 1.7E-97 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 SUPERFAMILY SSF53784 3 318 3.79E-100 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.3E-70 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 1.3E-70 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 219 231 1.3E-70 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 1.3E-70 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 1.3E-70 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.3E-70 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 1.3E-70 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 248 270 1.3E-70 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.3E-70 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 PIRSF PIRSF000532 1 331 2.5E-103 T 13-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 Gene3D G3DSA:3.40.50.450 4 294 4.1E-96 T 13-10-2018 ambt_07825 77a07ce9a9b819198ea915c04ca80e8f 331 ProSitePatterns PS00433 Phosphofructokinase signature. 252 270 - T 13-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ambt_22105 a713e19c80466e264953abc9d9c11982 177 Pfam PF13474 SnoaL-like domain 44 158 4.5E-29 T 13-10-2018 IPR037401 SnoaL-like domain ambt_22105 a713e19c80466e264953abc9d9c11982 177 Gene3D G3DSA:3.10.450.50 39 165 1.7E-8 T 13-10-2018 ambt_22105 a713e19c80466e264953abc9d9c11982 177 SUPERFAMILY SSF54427 37 158 2.58E-18 T 13-10-2018 IPR032710 NTF2-like domain superfamily ambt_22240 8b607f1f395853637a25659f7da51bd0 82 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 19 72 3.0E-19 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ambt_22240 8b607f1f395853637a25659f7da51bd0 82 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 11 81 1.4E-34 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ambt_22240 8b607f1f395853637a25659f7da51bd0 82 SMART SM01234 5 72 1.0E-40 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ambt_22240 8b607f1f395853637a25659f7da51bd0 82 Pfam PF01809 Haemolytic domain 9 72 1.6E-30 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ambt_22240 8b607f1f395853637a25659f7da51bd0 82 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 73 24.533 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ambt_15795 7eaeb6a9d765f8ae240e5ab2409e1abf 468 SUPERFAMILY SSF53720 20 449 8.64E-123 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_15795 7eaeb6a9d765f8ae240e5ab2409e1abf 468 Pfam PF00171 Aldehyde dehydrogenase family 24 440 2.1E-84 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_15795 7eaeb6a9d765f8ae240e5ab2409e1abf 468 Gene3D G3DSA:3.40.605.10 25 440 4.0E-178 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_15795 7eaeb6a9d765f8ae240e5ab2409e1abf 468 PIRSF PIRSF036492 4 468 1.3E-190 T 13-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 ambt_15795 7eaeb6a9d765f8ae240e5ab2409e1abf 468 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 221 228 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ambt_15795 7eaeb6a9d765f8ae240e5ab2409e1abf 468 Gene3D G3DSA:3.40.309.10 225 420 4.0E-178 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ambt_07685 b040f00a8725c5e2e724efb0064f63cb 867 Pfam PF12262 Bacterial virulence factor lipase N-terminal 1 276 8.9E-27 T 13-10-2018 IPR025920 Bacterial virulence factor lipase, N-terminal domain ambt_07685 b040f00a8725c5e2e724efb0064f63cb 867 TIGRFAM TIGR03502 lipase_Pla1_cef: extracellular lipase, Pla-1/cef family 1 851 9.6E-236 T 13-10-2018 IPR020009 Extracellular lipase, Pla-1/cef family ambt_07685 b040f00a8725c5e2e724efb0064f63cb 867 Gene3D G3DSA:3.40.50.1820 479 645 1.3E-21 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_07685 b040f00a8725c5e2e724efb0064f63cb 867 SUPERFAMILY SSF53474 484 638 3.68E-11 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_05075 d54b58713c5f83bd1e989738ebaf06a0 202 Pfam PF05036 Sporulation related domain 124 190 7.4E-11 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 ambt_05075 d54b58713c5f83bd1e989738ebaf06a0 202 SUPERFAMILY SSF110997 123 196 1.96E-13 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ambt_05075 d54b58713c5f83bd1e989738ebaf06a0 202 Gene3D G3DSA:3.30.70.1070 118 192 1.1E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 Gene3D G3DSA:1.20.200.10 118 446 3.7E-155 T 13-10-2018 ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 5.3E-143 T 13-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 Pfam PF00206 Lyase 14 312 1.2E-70 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 SUPERFAMILY SSF48557 4 446 1.01E-105 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 Gene3D G3DSA:1.10.275.10 1 117 1.0E-48 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 Gene3D G3DSA:1.10.40.30 382 445 3.7E-155 T 13-10-2018 ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 3.5E-51 T 13-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.8E-17 T 13-10-2018 IPR000362 Fumarate lyase family ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.8E-17 T 13-10-2018 IPR000362 Fumarate lyase family ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 2.8E-17 T 13-10-2018 IPR000362 Fumarate lyase family ambt_09690 b5dbc2faab4db2af14150b1d4cf36932 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 2.8E-17 T 13-10-2018 IPR000362 Fumarate lyase family ambt_04480 3646aef044d9c4f15f91972ef3bffd9f 281 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 257 280 1.8E-4 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain ambt_09410 094639efdb2a8afb897a41c57438401c 259 SUPERFAMILY SSF50182 61 132 2.26E-12 T 13-10-2018 IPR010920 LSM domain superfamily ambt_09410 094639efdb2a8afb897a41c57438401c 259 Pfam PF00924 Mechanosensitive ion channel 28 134 3.6E-15 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ambt_09410 094639efdb2a8afb897a41c57438401c 259 Gene3D G3DSA:2.30.30.60 76 132 3.1E-8 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ambt_00925 4229b88e7435ef442532e03726a86b62 204 Pfam PF01081 KDPG and KHG aldolase 4 197 1.1E-61 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ambt_00925 4229b88e7435ef442532e03726a86b62 204 Gene3D G3DSA:3.20.20.70 1 204 8.7E-61 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_00925 4229b88e7435ef442532e03726a86b62 204 SUPERFAMILY SSF51569 3 200 6.41E-56 T 13-10-2018 ambt_00925 4229b88e7435ef442532e03726a86b62 204 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 200 5.8E-64 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ambt_00925 4229b88e7435ef442532e03726a86b62 204 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 13-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ambt_11225 d3c125af59d1b90b816227af61e6e617 467 Pfam PF01235 Sodium:alanine symporter family 52 448 6.7E-147 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_11225 d3c125af59d1b90b816227af61e6e617 467 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 90 105 - T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_11225 d3c125af59d1b90b816227af61e6e617 467 PRINTS PR00175 Sodium/alanine symporter signature 302 320 1.3E-51 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_11225 d3c125af59d1b90b816227af61e6e617 467 PRINTS PR00175 Sodium/alanine symporter signature 209 228 1.3E-51 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_11225 d3c125af59d1b90b816227af61e6e617 467 PRINTS PR00175 Sodium/alanine symporter signature 408 428 1.3E-51 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_11225 d3c125af59d1b90b816227af61e6e617 467 PRINTS PR00175 Sodium/alanine symporter signature 90 112 1.3E-51 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_11225 d3c125af59d1b90b816227af61e6e617 467 PRINTS PR00175 Sodium/alanine symporter signature 181 199 1.3E-51 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_11225 d3c125af59d1b90b816227af61e6e617 467 PRINTS PR00175 Sodium/alanine symporter signature 347 369 1.3E-51 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_11225 d3c125af59d1b90b816227af61e6e617 467 TIGRFAM TIGR00835 agcS: amino acid carrier protein 19 439 2.5E-141 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ambt_04125 c875cecbc9b9466d81ea864f8f8969b2 87 SUPERFAMILY SSF46992 3 86 3.01E-32 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_04125 c875cecbc9b9466d81ea864f8f8969b2 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 86 8.0E-27 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_04125 c875cecbc9b9466d81ea864f8f8969b2 87 Gene3D G3DSA:1.20.58.110 1 87 8.7E-31 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_04125 c875cecbc9b9466d81ea864f8f8969b2 87 Pfam PF01649 Ribosomal protein S20 2 84 1.6E-28 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_04125 c875cecbc9b9466d81ea864f8f8969b2 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.989 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_04125 c875cecbc9b9466d81ea864f8f8969b2 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.3E-31 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_00860 706412806f424d53c46a8cbed7174be4 273 Pfam PF01925 Sulfite exporter TauE/SafE 13 267 7.7E-44 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ambt_17665 47ef0cd40ff6fe2a7bd51b5f8c08db16 77 SUPERFAMILY SSF47188 11 76 5.23E-15 T 13-10-2018 IPR035938 Hemerythrin-like superfamily ambt_17665 47ef0cd40ff6fe2a7bd51b5f8c08db16 77 Gene3D G3DSA:1.20.120.50 9 77 4.6E-17 T 13-10-2018 IPR035938 Hemerythrin-like superfamily ambt_17665 47ef0cd40ff6fe2a7bd51b5f8c08db16 77 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 17 76 9.5E-16 T 13-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 ambt_17665 47ef0cd40ff6fe2a7bd51b5f8c08db16 77 Pfam PF01814 Hemerythrin HHE cation binding domain 24 76 7.5E-6 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 ambt_21765 7c8627baf4e6e4d99b3dd5b88445fb58 815 SUPERFAMILY SSF69593 271 490 1.96E-27 T 13-10-2018 ambt_21765 7c8627baf4e6e4d99b3dd5b88445fb58 815 SMART SM00563 303 430 2.9E-27 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_21765 7c8627baf4e6e4d99b3dd5b88445fb58 815 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 12 807 0.0 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 ambt_21765 7c8627baf4e6e4d99b3dd5b88445fb58 815 PIRSF PIRSF500064 3 815 1.3E-269 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 ambt_21765 7c8627baf4e6e4d99b3dd5b88445fb58 815 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 813 26.75 T 13-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 ambt_21765 7c8627baf4e6e4d99b3dd5b88445fb58 815 PIRSF PIRSF000437 19 815 1.9E-258 T 13-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 ambt_21765 7c8627baf4e6e4d99b3dd5b88445fb58 815 Pfam PF01553 Acyltransferase 290 427 2.3E-23 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_12115 51dd8264e1caa8414bd77b8b0d864809 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 329 1.9E-146 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ambt_12115 51dd8264e1caa8414bd77b8b0d864809 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 8.7E-34 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ambt_12115 51dd8264e1caa8414bd77b8b0d864809 334 SMART SM00382 54 181 1.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_12115 51dd8264e1caa8414bd77b8b0d864809 334 SUPERFAMILY SSF52540 23 254 3.94E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12115 51dd8264e1caa8414bd77b8b0d864809 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 1.0E-35 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ambt_12115 51dd8264e1caa8414bd77b8b0d864809 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 1.0E-117 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 ambt_12115 51dd8264e1caa8414bd77b8b0d864809 334 Gene3D G3DSA:3.40.50.300 23 184 1.4E-39 T 13-10-2018 ambt_12115 51dd8264e1caa8414bd77b8b0d864809 334 SUPERFAMILY SSF46785 260 332 2.29E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_12115 51dd8264e1caa8414bd77b8b0d864809 334 Gene3D G3DSA:1.10.8.60 185 258 7.9E-30 T 13-10-2018 ambt_12115 51dd8264e1caa8414bd77b8b0d864809 334 Gene3D G3DSA:1.10.10.10 260 334 5.0E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_12115 51dd8264e1caa8414bd77b8b0d864809 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 181.226 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ambt_16450 4d8454ef9c88772e51bc3765379b1edc 172 Pfam PF10688 Bacterial inner membrane protein 6 166 6.1E-27 T 13-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV ambt_07695 a8d7037c9ea1414139b847aae63bef6c 342 Gene3D G3DSA:3.40.1750.20 196 260 2.5E-39 T 13-10-2018 ambt_07695 a8d7037c9ea1414139b847aae63bef6c 342 Pfam PF01343 Peptidase family S49 156 296 1.6E-39 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 ambt_07695 a8d7037c9ea1414139b847aae63bef6c 342 Pfam PF08496 Peptidase family S49 N-terminal 2 152 9.0E-58 T 13-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 ambt_07695 a8d7037c9ea1414139b847aae63bef6c 342 Gene3D G3DSA:3.90.226.10 99 295 2.5E-39 T 13-10-2018 ambt_07695 a8d7037c9ea1414139b847aae63bef6c 342 SUPERFAMILY SSF52096 95 293 3.92E-26 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_05310 e01b818e19bd0878892b231e05a56c6c 565 SUPERFAMILY SSF52540 3 321 4.49E-16 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_05310 e01b818e19bd0878892b231e05a56c6c 565 Gene3D G3DSA:3.40.50.300 3 339 2.4E-20 T 13-10-2018 ambt_05310 e01b818e19bd0878892b231e05a56c6c 565 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 245 316 1.3E-14 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_04730 c046943194ef017588786610708202cf 446 SUPERFAMILY SSF51445 15 352 9.37E-85 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_04730 c046943194ef017588786610708202cf 446 SUPERFAMILY SSF51011 367 442 1.18E-6 T 13-10-2018 ambt_04730 c046943194ef017588786610708202cf 446 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 363 430 3.6E-4 T 13-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 ambt_04730 c046943194ef017588786610708202cf 446 Gene3D G3DSA:3.20.20.80 12 348 1.5E-102 T 13-10-2018 ambt_04730 c046943194ef017588786610708202cf 446 Pfam PF00128 Alpha amylase, catalytic domain 149 314 3.6E-15 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_04730 c046943194ef017588786610708202cf 446 Pfam PF00128 Alpha amylase, catalytic domain 36 122 5.9E-20 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_04730 c046943194ef017588786610708202cf 446 Gene3D G3DSA:2.60.40.1180 363 443 1.4E-5 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta ambt_04730 c046943194ef017588786610708202cf 446 SMART SM00642 26 343 1.7E-23 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_14240 2a498e65182f447c90e7ad8f100337f0 216 Gene3D G3DSA:3.40.50.300 4 216 8.0E-8 T 13-10-2018 ambt_14240 2a498e65182f447c90e7ad8f100337f0 216 Pfam PF03567 Sulfotransferase family 5 214 6.0E-9 T 13-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 ambt_14240 2a498e65182f447c90e7ad8f100337f0 216 SUPERFAMILY SSF52540 7 216 7.77E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14075 fe23bf9552800ac262858fb87b99d676 331 SUPERFAMILY SSF52172 1 150 3.98E-29 T 13-10-2018 IPR011006 CheY-like superfamily ambt_14075 fe23bf9552800ac262858fb87b99d676 331 Gene3D G3DSA:3.40.1550.10 132 325 1.3E-34 T 13-10-2018 IPR028976 CheC-like superfamily ambt_14075 fe23bf9552800ac262858fb87b99d676 331 SUPERFAMILY SSF103039 133 325 5.41E-42 T 13-10-2018 IPR028976 CheC-like superfamily ambt_14075 fe23bf9552800ac262858fb87b99d676 331 Pfam PF00072 Response regulator receiver domain 4 114 8.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_14075 fe23bf9552800ac262858fb87b99d676 331 SMART SM00448 2 114 2.8E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_14075 fe23bf9552800ac262858fb87b99d676 331 Gene3D G3DSA:3.40.50.2300 1 122 5.3E-28 T 13-10-2018 ambt_05320 1faad23927ab7f4dd889a409c1601786 424 Pfam PF00589 Phage integrase family 222 396 1.1E-15 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_05320 1faad23927ab7f4dd889a409c1601786 424 Gene3D G3DSA:1.10.150.130 107 221 5.9E-30 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_05320 1faad23927ab7f4dd889a409c1601786 424 Gene3D G3DSA:1.10.443.10 235 410 8.1E-24 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_05320 1faad23927ab7f4dd889a409c1601786 424 SUPERFAMILY SSF56349 112 407 5.0E-55 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_09640 249583f3aea5db2ddcee940a703d344f 237 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 100 223 7.8E-33 T 13-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 ambt_09640 249583f3aea5db2ddcee940a703d344f 237 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 10 79 1.3E-17 T 13-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 ambt_09640 249583f3aea5db2ddcee940a703d344f 237 SUPERFAMILY SSF55729 73 232 2.02E-21 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_09640 249583f3aea5db2ddcee940a703d344f 237 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 1 230 33.13 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 ambt_09640 249583f3aea5db2ddcee940a703d344f 237 PIRSF PIRSF037208 1 237 6.5E-81 T 13-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 ambt_07930 efd84d2ccb35f8920baed98765a416e7 324 SUPERFAMILY SSF53850 92 321 8.45E-44 T 13-10-2018 ambt_07930 efd84d2ccb35f8920baed98765a416e7 324 SUPERFAMILY SSF46785 1 86 5.05E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_07930 efd84d2ccb35f8920baed98765a416e7 324 Gene3D G3DSA:1.10.10.10 1 86 3.4E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_07930 efd84d2ccb35f8920baed98765a416e7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_07930 efd84d2ccb35f8920baed98765a416e7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_07930 efd84d2ccb35f8920baed98765a416e7 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.9E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_07930 efd84d2ccb35f8920baed98765a416e7 324 Gene3D G3DSA:3.40.190.10 92 303 7.0E-100 T 13-10-2018 ambt_07930 efd84d2ccb35f8920baed98765a416e7 324 Pfam PF03466 LysR substrate binding domain 91 292 1.9E-40 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_07930 efd84d2ccb35f8920baed98765a416e7 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 4.0E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_07930 efd84d2ccb35f8920baed98765a416e7 324 Gene3D G3DSA:3.40.190.10 167 267 7.0E-100 T 13-10-2018 ambt_21390 e6b8bef4264cedf6ec83a5fa7c8f7ac2 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 2.3E-30 T 13-10-2018 IPR018076 Type II secretion system F domain ambt_21390 e6b8bef4264cedf6ec83a5fa7c8f7ac2 408 Pfam PF00482 Type II secretion system (T2SS), protein F 276 397 4.1E-24 T 13-10-2018 IPR018076 Type II secretion system F domain ambt_21390 e6b8bef4264cedf6ec83a5fa7c8f7ac2 408 Gene3D G3DSA:1.20.81.30 57 175 3.0E-32 T 13-10-2018 ambt_21390 e6b8bef4264cedf6ec83a5fa7c8f7ac2 408 Gene3D G3DSA:1.20.81.30 259 369 3.5E-25 T 13-10-2018 ambt_21390 e6b8bef4264cedf6ec83a5fa7c8f7ac2 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 13-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 ambt_21390 e6b8bef4264cedf6ec83a5fa7c8f7ac2 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 6.3E-36 T 13-10-2018 IPR003004 GspF/PilC family ambt_21390 e6b8bef4264cedf6ec83a5fa7c8f7ac2 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 6.3E-36 T 13-10-2018 IPR003004 GspF/PilC family ambt_21390 e6b8bef4264cedf6ec83a5fa7c8f7ac2 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 6.3E-36 T 13-10-2018 IPR003004 GspF/PilC family ambt_21390 e6b8bef4264cedf6ec83a5fa7c8f7ac2 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 6.3E-36 T 13-10-2018 IPR003004 GspF/PilC family ambt_21390 e6b8bef4264cedf6ec83a5fa7c8f7ac2 408 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 406 2.6E-160 T 13-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 ambt_07315 c56b1aca089bd6ebe96fa23e7486b1c6 249 SUPERFAMILY SSF103515 153 243 2.88E-5 T 13-10-2018 IPR036709 Autotransporter beta-domain superfamily ambt_07315 c56b1aca089bd6ebe96fa23e7486b1c6 249 Pfam PF05275 Copper resistance protein B precursor (CopB) 38 249 8.4E-69 T 13-10-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 ambt_05830 5ac433ac9e8b6efcb998cd9ea0477a0a 317 Pfam PF02685 Glucokinase 6 314 3.6E-107 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 ambt_05830 5ac433ac9e8b6efcb998cd9ea0477a0a 317 Hamap MF_00524 Glucokinase [glk]. 3 314 32.967 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 ambt_05830 5ac433ac9e8b6efcb998cd9ea0477a0a 317 Gene3D G3DSA:3.40.367.20 98 297 4.5E-101 T 13-10-2018 ambt_05830 5ac433ac9e8b6efcb998cd9ea0477a0a 317 TIGRFAM TIGR00749 glk: glucokinase 6 308 3.5E-91 T 13-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 ambt_05830 5ac433ac9e8b6efcb998cd9ea0477a0a 317 SUPERFAMILY SSF53067 6 314 1.01E-61 T 13-10-2018 ambt_05830 5ac433ac9e8b6efcb998cd9ea0477a0a 317 Gene3D G3DSA:3.30.420.40 6 308 4.5E-101 T 13-10-2018 ambt_03180 d004cca36c7c17ccee1b090311df35c4 318 Pfam PF12762 ISXO2-like transposase domain 142 299 2.7E-20 T 13-10-2018 IPR024445 ISXO2-like transposase domain ambt_03180 d004cca36c7c17ccee1b090311df35c4 318 SMART SM01126 142 299 1.4E-45 T 13-10-2018 IPR024445 ISXO2-like transposase domain ambt_17945 d004cca36c7c17ccee1b090311df35c4 318 Pfam PF12762 ISXO2-like transposase domain 142 299 2.7E-20 T 13-10-2018 IPR024445 ISXO2-like transposase domain ambt_17945 d004cca36c7c17ccee1b090311df35c4 318 SMART SM01126 142 299 1.4E-45 T 13-10-2018 IPR024445 ISXO2-like transposase domain ambt_19605 d239972c570e6cef0b81d35f0b517427 394 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 23 391 4.1E-120 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ambt_19605 d239972c570e6cef0b81d35f0b517427 394 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 173 191 4.2E-38 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ambt_19605 d239972c570e6cef0b81d35f0b517427 394 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 53 74 4.2E-38 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ambt_19605 d239972c570e6cef0b81d35f0b517427 394 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 264 290 4.2E-38 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ambt_19605 d239972c570e6cef0b81d35f0b517427 394 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 316 337 4.2E-38 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ambt_19605 d239972c570e6cef0b81d35f0b517427 394 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 84 104 4.2E-38 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ambt_19605 d239972c570e6cef0b81d35f0b517427 394 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 214 239 4.2E-38 T 13-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ambt_19605 d239972c570e6cef0b81d35f0b517427 394 Gene3D G3DSA:3.90.770.10 64 377 1.2E-113 T 13-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ambt_19605 d239972c570e6cef0b81d35f0b517427 394 SUPERFAMILY SSF56542 15 380 8.11E-70 T 13-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ambt_19605 d239972c570e6cef0b81d35f0b517427 394 Gene3D G3DSA:3.30.70.420 118 233 1.2E-113 T 13-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ambt_19605 d239972c570e6cef0b81d35f0b517427 394 SUPERFAMILY SSF55035 119 233 1.57E-37 T 13-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ambt_10730 a4b618445694fba8cff05186dfcac6fd 187 SUPERFAMILY SSF48452 11 182 8.72E-66 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_10730 a4b618445694fba8cff05186dfcac6fd 187 Pfam PF06041 Bacterial protein of unknown function (DUF924) 14 184 2.5E-60 T 13-10-2018 IPR010323 Protein of unknown function DUF924 ambt_10730 a4b618445694fba8cff05186dfcac6fd 187 Gene3D G3DSA:1.20.58.320 6 86 3.9E-27 T 13-10-2018 ambt_10730 a4b618445694fba8cff05186dfcac6fd 187 Gene3D G3DSA:1.25.40.10 87 187 1.0E-30 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_21895 c2fb4558c953b9c367be3d7dc6ac052d 189 Pfam PF06938 Protein of unknown function (DUF1285) 36 179 2.9E-48 T 13-10-2018 IPR010707 Protein of unknown function DUF1285 ambt_21895 c2fb4558c953b9c367be3d7dc6ac052d 189 Gene3D G3DSA:2.30.270.10 87 157 1.0E-11 T 13-10-2018 IPR023361 DUF1285, beta-roll domain superfamily ambt_21895 c2fb4558c953b9c367be3d7dc6ac052d 189 Gene3D G3DSA:3.10.540.10 2 86 1.2E-33 T 13-10-2018 ambt_21895 c2fb4558c953b9c367be3d7dc6ac052d 189 PIRSF PIRSF029557 1 188 8.2E-56 T 13-10-2018 IPR010707 Protein of unknown function DUF1285 ambt_02800 3dbba1851d250bb9622a66a67d0eb7d9 227 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 8 157 2.8E-22 T 13-10-2018 IPR002654 Glycosyl transferase, family 25 ambt_04320 fdf417d86e12d100372db08a45ab0795 852 Pfam PF07238 PilZ domain 501 585 9.3E-5 T 13-10-2018 IPR009875 PilZ domain GO:0035438 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 Gene3D G3DSA:3.30.230.70 232 548 3.7E-115 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 319 3.3E-19 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 Gene3D G3DSA:3.30.230.70 2 227 2.5E-78 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 Gene3D G3DSA:2.40.50.140 621 692 2.5E-27 T 13-10-2018 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 PIRSF PIRSF005499 1 703 8.7E-294 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 SUPERFAMILY SSF54211 4 143 1.37E-49 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 690 0.0 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 SMART SM00316 619 689 9.6E-23 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 Pfam PF00013 KH domain 555 612 3.5E-9 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 Gene3D G3DSA:3.30.1370.10 549 620 5.7E-18 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 SUPERFAMILY SSF50249 619 696 1.09E-20 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 30.042 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 SMART SM00322 551 616 8.6E-11 T 13-10-2018 IPR004087 K Homology domain GO:0003676 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 7.8E-11 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 SUPERFAMILY SSF55666 144 234 7.71E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 1.5E-20 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 Pfam PF01138 3' exoribonuclease family, domain 1 323 455 7.0E-23 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 SUPERFAMILY SSF54211 292 487 1.87E-46 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 Pfam PF00575 S1 RNA binding domain 618 689 1.9E-17 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 SUPERFAMILY SSF54791 553 639 8.72E-21 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 SUPERFAMILY SSF46915 238 319 2.54E-18 T 13-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ambt_09400 b78907ef46ff4cbcec22d449b2d3795b 703 SUPERFAMILY SSF55666 449 548 1.3E-28 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ambt_14740 8f5d4dbd8dbd759580aa02968c40c929 473 Gene3D G3DSA:3.40.50.150 119 465 1.1E-95 T 13-10-2018 ambt_14740 8f5d4dbd8dbd759580aa02968c40c929 473 SUPERFAMILY SSF50249 51 104 2.4E-8 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_14740 8f5d4dbd8dbd759580aa02968c40c929 473 Gene3D G3DSA:2.40.50.140 39 118 3.0E-18 T 13-10-2018 ambt_14740 8f5d4dbd8dbd759580aa02968c40c929 473 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 57 463 5.8E-87 T 13-10-2018 ambt_14740 8f5d4dbd8dbd759580aa02968c40c929 473 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 164 470 3.6E-19 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ambt_14740 8f5d4dbd8dbd759580aa02968c40c929 473 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 50 471 54.861 T 13-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 ambt_14740 8f5d4dbd8dbd759580aa02968c40c929 473 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 402 432 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site ambt_14740 8f5d4dbd8dbd759580aa02968c40c929 473 SUPERFAMILY SSF53335 107 470 1.55E-62 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_14740 8f5d4dbd8dbd759580aa02968c40c929 473 Gene3D G3DSA:3.40.1350.30 166 303 1.1E-95 T 13-10-2018 ambt_01005 34f57202775f85e6416000e74ebe4e7c 272 SMART SM00332 2 245 4.3E-7 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_01005 34f57202775f85e6416000e74ebe4e7c 272 Gene3D G3DSA:3.60.40.10 2 251 2.1E-46 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_01005 34f57202775f85e6416000e74ebe4e7c 272 SUPERFAMILY SSF81606 3 248 1.2E-42 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_01005 34f57202775f85e6416000e74ebe4e7c 272 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 34 247 2.2E-11 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_01005 34f57202775f85e6416000e74ebe4e7c 272 SMART SM00331 9 247 5.1E-20 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_13665 80243f0df61b06f86cb358e183097425 825 Gene3D G3DSA:2.40.160.50 430 825 1.4E-111 T 13-10-2018 ambt_13665 80243f0df61b06f86cb358e183097425 825 Gene3D G3DSA:3.10.20.310 352 429 2.5E-19 T 13-10-2018 ambt_13665 80243f0df61b06f86cb358e183097425 825 Gene3D G3DSA:3.10.20.310 96 176 5.1E-14 T 13-10-2018 ambt_13665 80243f0df61b06f86cb358e183097425 825 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 825 24.089 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ambt_13665 80243f0df61b06f86cb358e183097425 825 Pfam PF01103 Surface antigen 452 825 1.4E-79 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 ambt_13665 80243f0df61b06f86cb358e183097425 825 PIRSF PIRSF006076 1 825 6.9E-232 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ambt_13665 80243f0df61b06f86cb358e183097425 825 Pfam PF07244 Surface antigen variable number repeat 180 267 3.9E-13 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ambt_13665 80243f0df61b06f86cb358e183097425 825 Pfam PF07244 Surface antigen variable number repeat 270 348 2.1E-12 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ambt_13665 80243f0df61b06f86cb358e183097425 825 Pfam PF07244 Surface antigen variable number repeat 351 425 7.3E-11 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ambt_13665 80243f0df61b06f86cb358e183097425 825 Pfam PF07244 Surface antigen variable number repeat 96 176 3.9E-9 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ambt_13665 80243f0df61b06f86cb358e183097425 825 Gene3D G3DSA:3.10.20.310 269 350 9.6E-17 T 13-10-2018 ambt_13665 80243f0df61b06f86cb358e183097425 825 Gene3D G3DSA:3.10.20.310 22 95 1.3E-16 T 13-10-2018 ambt_13665 80243f0df61b06f86cb358e183097425 825 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 28 825 2.0E-259 T 13-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ambt_13665 80243f0df61b06f86cb358e183097425 825 Gene3D G3DSA:3.10.20.310 179 268 5.8E-21 T 13-10-2018 ambt_20550 c21c3131cdd41a56bfc11c3e6c3f4717 473 SMART SM00267 308 470 2.0E-25 T 13-10-2018 IPR000160 GGDEF domain ambt_20550 c21c3131cdd41a56bfc11c3e6c3f4717 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 327 469 1.2E-29 T 13-10-2018 IPR000160 GGDEF domain ambt_20550 c21c3131cdd41a56bfc11c3e6c3f4717 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 323 465 3.8E-29 T 13-10-2018 IPR000160 GGDEF domain ambt_20550 c21c3131cdd41a56bfc11c3e6c3f4717 473 SUPERFAMILY SSF55073 322 468 1.26E-30 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_20550 c21c3131cdd41a56bfc11c3e6c3f4717 473 Gene3D G3DSA:3.30.70.270 318 471 7.9E-33 T 13-10-2018 ambt_02710 0321d2e1482e68bd89336c37bd3e993e 140 Gene3D G3DSA:3.10.580.10 1 140 1.2E-27 T 13-10-2018 ambt_02710 0321d2e1482e68bd89336c37bd3e993e 140 Pfam PF00571 CBS domain 68 121 5.3E-7 T 13-10-2018 IPR000644 CBS domain ambt_02710 0321d2e1482e68bd89336c37bd3e993e 140 Pfam PF00571 CBS domain 4 53 8.6E-8 T 13-10-2018 IPR000644 CBS domain ambt_02710 0321d2e1482e68bd89336c37bd3e993e 140 SMART SM00116 10 57 0.0018 T 13-10-2018 IPR000644 CBS domain ambt_02710 0321d2e1482e68bd89336c37bd3e993e 140 SMART SM00116 74 124 0.11 T 13-10-2018 IPR000644 CBS domain ambt_02710 0321d2e1482e68bd89336c37bd3e993e 140 SUPERFAMILY SSF54631 1 121 3.92E-26 T 13-10-2018 ambt_08770 af3721f719bb67043038d30bf1c2a45b 589 SUPERFAMILY SSF52540 8 310 4.78E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_08770 af3721f719bb67043038d30bf1c2a45b 589 Pfam PF07693 KAP family P-loop domain 15 382 1.3E-49 T 13-10-2018 IPR011646 KAP family P-loop domain ambt_06490 fae60a2d9a82df411a90d25d77abc297 391 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 118 282 2.8E-41 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 ambt_06490 fae60a2d9a82df411a90d25d77abc297 391 Pfam PF13531 Bacterial extracellular solute-binding protein 113 361 1.2E-35 T 13-10-2018 ambt_06490 fae60a2d9a82df411a90d25d77abc297 391 SUPERFAMILY SSF53850 112 363 4.6E-43 T 13-10-2018 ambt_06490 fae60a2d9a82df411a90d25d77abc297 391 Gene3D G3DSA:3.40.190.10 192 323 2.6E-56 T 13-10-2018 ambt_06490 fae60a2d9a82df411a90d25d77abc297 391 Gene3D G3DSA:3.40.190.10 117 361 2.6E-56 T 13-10-2018 ambt_21940 7140276a8b73233d645749ca4d9bd9a5 237 Gene3D G3DSA:3.30.230.70 13 237 4.5E-61 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ambt_21940 7140276a8b73233d645749ca4d9bd9a5 237 SUPERFAMILY SSF54211 1 181 2.38E-45 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_21940 7140276a8b73233d645749ca4d9bd9a5 237 Pfam PF03725 3' exoribonuclease family, domain 2 157 223 1.5E-8 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ambt_21940 7140276a8b73233d645749ca4d9bd9a5 237 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.1E-113 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 ambt_21940 7140276a8b73233d645749ca4d9bd9a5 237 SUPERFAMILY SSF55666 153 236 1.31E-23 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ambt_21940 7140276a8b73233d645749ca4d9bd9a5 237 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 13-10-2018 IPR018336 Ribonuclease PH, conserved site ambt_21940 7140276a8b73233d645749ca4d9bd9a5 237 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 44.215 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 ambt_21940 7140276a8b73233d645749ca4d9bd9a5 237 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 5.8E-24 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 PIRSF PIRSF000114 1 334 5.0E-99 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 182 321 2.1E-52 T 13-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 SUPERFAMILY SSF51735 6 180 3.65E-47 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 200 224 1.6E-38 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 1.6E-38 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 1.6E-38 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 1.6E-38 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 240 257 1.6E-38 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 175 199 1.6E-38 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 Gene3D G3DSA:3.40.50.720 1 189 8.9E-52 T 13-10-2018 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 190 211 - T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 324 37.802 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 Gene3D G3DSA:1.10.1040.10 191 334 4.6E-52 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 SUPERFAMILY SSF48179 182 333 7.65E-57 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ambt_16025 2c19104ad58806b7a453cd60504b4f8c 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 161 2.2E-47 T 13-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ambt_15205 a5f5743d63db652abdcf3c1371483d5c 226 SMART SM00014 95 209 2.1E-19 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ambt_15205 a5f5743d63db652abdcf3c1371483d5c 226 Pfam PF01569 PAP2 superfamily 96 214 1.8E-23 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ambt_15205 a5f5743d63db652abdcf3c1371483d5c 226 Gene3D G3DSA:1.20.144.10 127 226 2.4E-20 T 13-10-2018 ambt_15205 a5f5743d63db652abdcf3c1371483d5c 226 Gene3D G3DSA:1.20.144.10 18 126 1.3E-6 T 13-10-2018 ambt_15205 a5f5743d63db652abdcf3c1371483d5c 226 SUPERFAMILY SSF48317 15 217 4.58E-35 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ambt_09745 d7f710868fe12195e76d61c8b868a35c 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 9.2E-19 T 13-10-2018 ambt_09745 d7f710868fe12195e76d61c8b868a35c 220 SUPERFAMILY SSF56784 3 200 4.38E-13 T 13-10-2018 IPR036412 HAD-like superfamily ambt_09745 d7f710868fe12195e76d61c8b868a35c 220 Gene3D G3DSA:1.20.1440.100 15 88 4.5E-21 T 13-10-2018 ambt_09745 d7f710868fe12195e76d61c8b868a35c 220 Gene3D G3DSA:3.40.50.1000 4 201 4.5E-21 T 13-10-2018 IPR023214 HAD superfamily ambt_09745 d7f710868fe12195e76d61c8b868a35c 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 188 4.9E-13 T 13-10-2018 ambt_15390 14709008bfbef549aa043865d0556197 277 Gene3D G3DSA:3.30.572.10 1 277 5.5E-126 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ambt_15390 14709008bfbef549aa043865d0556197 277 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.3E-40 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ambt_15390 14709008bfbef549aa043865d0556197 277 PRINTS PR00108 Thymidylate synthase family signature 210 227 1.3E-40 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ambt_15390 14709008bfbef549aa043865d0556197 277 PRINTS PR00108 Thymidylate synthase family signature 172 198 1.3E-40 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ambt_15390 14709008bfbef549aa043865d0556197 277 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.3E-40 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ambt_15390 14709008bfbef549aa043865d0556197 277 SUPERFAMILY SSF55831 1 277 3.93E-124 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ambt_15390 14709008bfbef549aa043865d0556197 277 Hamap MF_00008 Thymidylate synthase [thyA]. 1 277 40.198 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ambt_15390 14709008bfbef549aa043865d0556197 277 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 277 2.2E-91 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ambt_15390 14709008bfbef549aa043865d0556197 277 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 86 5.4E-40 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ambt_15390 14709008bfbef549aa043865d0556197 277 Pfam PF00303 Thymidylate synthase 2 277 8.6E-120 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ambt_03365 ff2b07a8bda4690bd076fc59acc4f73d 218 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 211 6.7E-33 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ambt_03365 ff2b07a8bda4690bd076fc59acc4f73d 218 Gene3D G3DSA:3.90.226.10 2 218 8.9E-55 T 13-10-2018 ambt_03365 ff2b07a8bda4690bd076fc59acc4f73d 218 SUPERFAMILY SSF52096 6 212 2.6E-41 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_00470 967d17634b012406e39cbbf0c90d004f 410 Gene3D G3DSA:3.10.20.30 37 128 9.4E-31 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_00470 967d17634b012406e39cbbf0c90d004f 410 Pfam PF00175 Oxidoreductase NAD-binding domain 280 388 4.4E-18 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ambt_00470 967d17634b012406e39cbbf0c90d004f 410 Gene3D G3DSA:3.40.50.80 278 396 3.4E-33 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ambt_00470 967d17634b012406e39cbbf0c90d004f 410 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 40 117 2.1E-9 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ambt_00470 967d17634b012406e39cbbf0c90d004f 410 PIRSF PIRSF000044 1 410 7.6E-216 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 ambt_00470 967d17634b012406e39cbbf0c90d004f 410 Gene3D G3DSA:2.40.30.10 129 267 4.1E-49 T 13-10-2018 ambt_00470 967d17634b012406e39cbbf0c90d004f 410 Pfam PF00970 Oxidoreductase FAD-binding domain 205 269 8.6E-10 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ambt_00470 967d17634b012406e39cbbf0c90d004f 410 SUPERFAMILY SSF63380 108 273 8.78E-34 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ambt_00470 967d17634b012406e39cbbf0c90d004f 410 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 4 410 61.794 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 ambt_00470 967d17634b012406e39cbbf0c90d004f 410 SUPERFAMILY SSF54292 38 125 4.3E-21 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ambt_00470 967d17634b012406e39cbbf0c90d004f 410 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 6 410 1.7E-222 T 13-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 ambt_00470 967d17634b012406e39cbbf0c90d004f 410 SUPERFAMILY SSF52343 262 406 2.62E-37 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ambt_01265 e9bc05f0a32916168affb075e8f7ca9e 1086 Pfam PF12770 CHAT domain 794 1084 1.6E-62 T 13-10-2018 IPR024983 CHAT domain ambt_01265 e9bc05f0a32916168affb075e8f7ca9e 1086 SUPERFAMILY SSF48452 449 557 3.21E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_01265 e9bc05f0a32916168affb075e8f7ca9e 1086 SUPERFAMILY SSF48452 322 470 1.09E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_01265 e9bc05f0a32916168affb075e8f7ca9e 1086 Gene3D G3DSA:1.25.40.10 440 576 1.2E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_01265 e9bc05f0a32916168affb075e8f7ca9e 1086 Gene3D G3DSA:1.25.40.10 247 436 1.1E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_19220 bcdeef130210fb2265fde43b9dd98814 157 Gene3D G3DSA:3.30.70.920 59 142 8.4E-24 T 13-10-2018 ambt_19220 bcdeef130210fb2265fde43b9dd98814 157 Gene3D G3DSA:1.10.10.10 7 58 2.7E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_19220 bcdeef130210fb2265fde43b9dd98814 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ambt_19220 bcdeef130210fb2265fde43b9dd98814 157 SMART SM00344 6 115 3.1E-39 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ambt_19220 bcdeef130210fb2265fde43b9dd98814 157 Pfam PF13404 AsnC-type helix-turn-helix domain 6 47 1.2E-16 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ambt_19220 bcdeef130210fb2265fde43b9dd98814 157 SUPERFAMILY SSF54909 67 154 1.59E-19 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel ambt_19220 bcdeef130210fb2265fde43b9dd98814 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.3E-12 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ambt_19220 bcdeef130210fb2265fde43b9dd98814 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.3E-12 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ambt_19220 bcdeef130210fb2265fde43b9dd98814 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.3E-12 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ambt_19220 bcdeef130210fb2265fde43b9dd98814 157 Pfam PF01037 Lrp/AsnC ligand binding domain 72 145 1.5E-19 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ambt_19220 bcdeef130210fb2265fde43b9dd98814 157 SUPERFAMILY SSF46785 2 95 1.09E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 Pfam PF00082 Subtilase family 190 432 2.2E-50 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 230 240 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 382 392 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 185 204 5.1E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 226 239 5.1E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 PRINTS PR00723 Subtilisin serine protease family (S8) signature 381 397 5.1E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 481 547 1.3E-13 T 13-10-2018 IPR007280 Peptidase, C-terminal, archaeal/bacterial ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 Gene3D G3DSA:3.30.70.80 61 167 3.9E-11 T 13-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 Gene3D G3DSA:2.60.120.380 465 561 2.0E-35 T 13-10-2018 ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 Gene3D G3DSA:3.40.50.200 168 451 2.3E-83 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 SUPERFAMILY SSF52743 165 444 5.37E-83 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ambt_19135 fdd8d6dfd386788cd652fc8fbadca17c 562 SUPERFAMILY SSF54897 68 161 2.68E-6 T 13-10-2018 ambt_02360 d8077a0643febae6cce676f7d1426f3a 236 PIRSF PIRSF029033 1 236 2.3E-92 T 13-10-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein ambt_02360 d8077a0643febae6cce676f7d1426f3a 236 Pfam PF04402 Protein of unknown function (DUF541) 38 206 2.2E-14 T 13-10-2018 IPR007497 Protein of unknown function DUF541 ambt_02360 d8077a0643febae6cce676f7d1426f3a 236 Gene3D G3DSA:3.30.110.170 40 207 1.2E-8 T 13-10-2018 ambt_02360 d8077a0643febae6cce676f7d1426f3a 236 Gene3D G3DSA:3.30.70.2970 50 166 1.2E-8 T 13-10-2018 ambt_18190 086fb53460e234f86037a1f0e5050702 380 Gene3D G3DSA:2.40.50.100 63 207 9.6E-97 T 13-10-2018 ambt_18190 086fb53460e234f86037a1f0e5050702 380 Gene3D G3DSA:1.10.287.470 98 171 9.6E-97 T 13-10-2018 ambt_18190 086fb53460e234f86037a1f0e5050702 380 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 288 1.1E-14 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_18190 086fb53460e234f86037a1f0e5050702 380 Gene3D G3DSA:2.40.420.20 298 367 9.6E-97 T 13-10-2018 ambt_18190 086fb53460e234f86037a1f0e5050702 380 Gene3D G3DSA:2.40.30.170 50 297 9.6E-97 T 13-10-2018 ambt_18190 086fb53460e234f86037a1f0e5050702 380 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 368 6.0E-75 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_18190 086fb53460e234f86037a1f0e5050702 380 SUPERFAMILY SSF111369 54 292 1.57E-71 T 13-10-2018 ambt_07820 01db8357234a6de5c4fccb56b1190a99 275 Pfam PF00072 Response regulator receiver domain 9 118 2.2E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_07820 01db8357234a6de5c4fccb56b1190a99 275 SMART SM00850 177 274 3.5E-30 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ambt_07820 01db8357234a6de5c4fccb56b1190a99 275 Gene3D G3DSA:2.40.50.40 168 237 7.8E-13 T 13-10-2018 ambt_07820 01db8357234a6de5c4fccb56b1190a99 275 Pfam PF04397 LytTr DNA-binding domain 178 273 1.7E-22 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ambt_07820 01db8357234a6de5c4fccb56b1190a99 275 Gene3D G3DSA:3.40.50.2300 1 139 1.2E-35 T 13-10-2018 ambt_07820 01db8357234a6de5c4fccb56b1190a99 275 SMART SM00448 6 118 1.2E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_07820 01db8357234a6de5c4fccb56b1190a99 275 SUPERFAMILY SSF52172 7 135 5.27E-34 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01945 141d64c333451b8c9e73f2cd20639cd0 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 61 5.1E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_01945 141d64c333451b8c9e73f2cd20639cd0 291 SUPERFAMILY SSF53850 89 287 4.16E-41 T 13-10-2018 ambt_01945 141d64c333451b8c9e73f2cd20639cd0 291 Gene3D G3DSA:1.10.10.10 1 90 3.9E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_01945 141d64c333451b8c9e73f2cd20639cd0 291 Gene3D G3DSA:3.40.190.290 91 287 1.8E-62 T 13-10-2018 ambt_01945 141d64c333451b8c9e73f2cd20639cd0 291 SUPERFAMILY SSF46785 1 85 4.79E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_01945 141d64c333451b8c9e73f2cd20639cd0 291 Pfam PF03466 LysR substrate binding domain 89 286 1.5E-39 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_07175 7d36746f237e2639718205626e95026d 535 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 525 23.187 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 ambt_07175 7d36746f237e2639718205626e95026d 535 SUPERFAMILY SSF64383 394 529 5.36E-48 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 ambt_07175 7d36746f237e2639718205626e95026d 535 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 400 525 1.0E-61 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 ambt_07175 7d36746f237e2639718205626e95026d 535 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 335 523 1.3E-43 T 13-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 ambt_07175 7d36746f237e2639718205626e95026d 535 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 395 521 7.8E-46 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 ambt_07175 7d36746f237e2639718205626e95026d 535 SMART SM00771 393 523 1.4E-54 T 13-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 ambt_07175 7d36746f237e2639718205626e95026d 535 Gene3D G3DSA:3.30.1400.10 391 531 2.6E-50 T 13-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 ambt_06405 ec3318f3be083b947d44992438052073 506 SUPERFAMILY SSF53098 132 261 5.16E-16 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_06405 ec3318f3be083b947d44992438052073 506 Pfam PF13551 Winged helix-turn helix 387 444 2.5E-9 T 13-10-2018 ambt_06405 ec3318f3be083b947d44992438052073 506 Gene3D G3DSA:3.30.420.10 155 269 4.8E-9 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_06405 ec3318f3be083b947d44992438052073 506 SUPERFAMILY SSF46689 15 114 3.94E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_06405 ec3318f3be083b947d44992438052073 506 SUPERFAMILY SSF46689 385 487 3.82E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_06405 ec3318f3be083b947d44992438052073 506 Pfam PF00665 Integrase core domain 137 252 3.0E-8 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_07530 f34c9ee54263fde60ea1b536b9f71590 260 Gene3D G3DSA:3.40.50.720 2 260 5.1E-104 T 13-10-2018 ambt_07530 f34c9ee54263fde60ea1b536b9f71590 260 SUPERFAMILY SSF69572 3 259 3.01E-68 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ambt_07530 f34c9ee54263fde60ea1b536b9f71590 260 Pfam PF00899 ThiF family 16 258 1.3E-39 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ambt_19015 52af74b88dfed12203bfa0fba2e2e32e 224 SUPERFAMILY SSF52540 22 196 2.44E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_11160 9d02c55210335cdc94dec0bab4e129c5 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 42.174 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ambt_11160 9d02c55210335cdc94dec0bab4e129c5 361 Pfam PF00472 RF-1 domain 215 323 3.9E-43 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ambt_11160 9d02c55210335cdc94dec0bab4e129c5 361 Gene3D G3DSA:3.30.160.20 212 299 2.2E-97 T 13-10-2018 ambt_11160 9d02c55210335cdc94dec0bab4e129c5 361 Gene3D G3DSA:1.20.58.410 3 104 8.2E-9 T 13-10-2018 ambt_11160 9d02c55210335cdc94dec0bab4e129c5 361 SUPERFAMILY SSF75620 12 355 5.62E-140 T 13-10-2018 ambt_11160 9d02c55210335cdc94dec0bab4e129c5 361 Pfam PF03462 PCRF domain 13 205 5.6E-76 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 ambt_11160 9d02c55210335cdc94dec0bab4e129c5 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ambt_11160 9d02c55210335cdc94dec0bab4e129c5 361 Gene3D G3DSA:3.30.70.1660 113 343 2.2E-97 T 13-10-2018 ambt_11160 9d02c55210335cdc94dec0bab4e129c5 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 5.2E-173 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ambt_11160 9d02c55210335cdc94dec0bab4e129c5 361 SMART SM00937 67 180 4.6E-69 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 5.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 5.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 5.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 5.1E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 Pfam PF00512 His Kinase A (phospho-acceptor) domain 294 358 8.9E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 Pfam PF00072 Response regulator receiver domain 545 654 5.5E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 SMART SM00387 405 520 4.3E-28 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 Gene3D G3DSA:3.40.50.2300 531 662 8.2E-35 T 13-10-2018 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 SUPERFAMILY SSF55785 166 270 2.33E-8 T 13-10-2018 IPR035965 PAS domain superfamily ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 405 519 4.1E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 Gene3D G3DSA:1.10.287.130 268 356 1.1E-15 T 13-10-2018 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 SUPERFAMILY SSF55874 347 522 1.7E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 SMART SM00448 543 661 3.7E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 Gene3D G3DSA:3.30.565.10 357 525 3.4E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 SMART SM00388 293 358 1.2E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 Gene3D G3DSA:3.30.450.20 155 267 5.6E-12 T 13-10-2018 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 SUPERFAMILY SSF47384 277 359 6.67E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_10790 5a1d3ed4fa9f8fd8eb1ab33d8f33dced 670 SUPERFAMILY SSF52172 543 660 1.85E-30 T 13-10-2018 IPR011006 CheY-like superfamily ambt_17755 6a11c86b531a2e8f1ee1138d4947180b 352 Gene3D G3DSA:3.40.50.1220 2 94 4.6E-7 T 13-10-2018 ambt_17755 6a11c86b531a2e8f1ee1138d4947180b 352 SUPERFAMILY SSF52467 2 97 7.48E-9 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ambt_17755 6a11c86b531a2e8f1ee1138d4947180b 352 Gene3D G3DSA:3.30.1600.10 17 54 4.6E-7 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily ambt_20145 afeef4bed4eb0407e6f212a913ff17dc 890 SUPERFAMILY SSF49899 39 328 7.03E-76 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ambt_20145 afeef4bed4eb0407e6f212a913ff17dc 890 SUPERFAMILY SSF49785 549 722 1.45E-39 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_20145 afeef4bed4eb0407e6f212a913ff17dc 890 SUPERFAMILY SSF49785 367 544 6.89E-29 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_20145 afeef4bed4eb0407e6f212a913ff17dc 890 Pfam PF00722 Glycosyl hydrolases family 16 83 245 1.3E-25 T 13-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 ambt_20145 afeef4bed4eb0407e6f212a913ff17dc 890 SUPERFAMILY SSF49785 726 887 3.19E-40 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_20145 afeef4bed4eb0407e6f212a913ff17dc 890 Gene3D G3DSA:2.60.120.430 721 889 3.2E-5 T 13-10-2018 ambt_20145 afeef4bed4eb0407e6f212a913ff17dc 890 Gene3D G3DSA:2.60.120.200 38 334 1.3E-86 T 13-10-2018 ambt_09890 03a039f99f67e067916cbf75364d5c87 128 Pfam PF14552 Tautomerase enzyme 36 112 3.7E-22 T 13-10-2018 IPR037479 Tautomerase, MSAD family ambt_09890 03a039f99f67e067916cbf75364d5c87 128 SUPERFAMILY SSF55331 2 118 2.32E-30 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily ambt_09890 03a039f99f67e067916cbf75364d5c87 128 Gene3D G3DSA:3.30.429.10 1 128 3.7E-37 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily ambt_17660 c15f4bde39abacc71bd5751bc6d3fd75 204 SUPERFAMILY SSF53335 11 197 3.04E-21 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_17660 c15f4bde39abacc71bd5751bc6d3fd75 204 Gene3D G3DSA:3.40.50.150 5 203 1.3E-13 T 13-10-2018 ambt_17660 c15f4bde39abacc71bd5751bc6d3fd75 204 Pfam PF06080 Protein of unknown function (DUF938) 9 203 1.6E-60 T 13-10-2018 IPR010342 Protein of unknown function DUF938 ambt_03220 ea40c0f3888fb02deaea9c75764a9aa4 206 SUPERFAMILY SSF82185 67 179 1.57E-19 T 13-10-2018 ambt_03220 ea40c0f3888fb02deaea9c75764a9aa4 206 Gene3D G3DSA:3.90.930.1 48 183 6.5E-15 T 13-10-2018 ambt_17035 1b90ba7fe6959c543da88cbb32ad1373 283 Pfam PF06114 IrrE N-terminal-like domain 154 254 1.1E-8 T 13-10-2018 IPR010359 IrrE N-terminal-like domain ambt_09580 6b84915d986d92f34301006a6412daac 625 Pfam PF05960 Bacterial protein of unknown function (DUF885) 77 614 2.4E-167 T 13-10-2018 IPR010281 Protein of unknown function DUF885 ambt_16605 581240d43c6a0d9f1c2e0251c1636cc1 205 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 42 188 2.4E-31 T 13-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 ambt_10385 1036fb8acac90ca13ecb4b8dea2128a9 213 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 9 200 1.0E-11 T 13-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 ambt_12500 22159ee4768ccf129c972f0f1992906b 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 43.519 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 ambt_12500 22159ee4768ccf129c972f0f1992906b 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 ambt_12500 22159ee4768ccf129c972f0f1992906b 671 SUPERFAMILY SSF46600 625 667 1.57E-9 T 13-10-2018 IPR036876 UVR domain superfamily ambt_12500 22159ee4768ccf129c972f0f1992906b 671 SUPERFAMILY SSF52540 37 583 9.82E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12500 22159ee4768ccf129c972f0f1992906b 671 Gene3D G3DSA:3.40.50.300 1 243 4.4E-77 T 13-10-2018 ambt_12500 22159ee4768ccf129c972f0f1992906b 671 Gene3D G3DSA:3.40.50.300 415 589 1.9E-49 T 13-10-2018 ambt_12500 22159ee4768ccf129c972f0f1992906b 671 Gene3D G3DSA:4.10.860.10 626 671 1.1E-11 T 13-10-2018 ambt_12500 22159ee4768ccf129c972f0f1992906b 671 SMART SM00487 9 425 6.4E-24 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_12500 22159ee4768ccf129c972f0f1992906b 671 Pfam PF00271 Helicase conserved C-terminal domain 436 544 1.7E-17 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_12500 22159ee4768ccf129c972f0f1992906b 671 Pfam PF04851 Type III restriction enzyme, res subunit 16 121 2.8E-8 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ambt_12500 22159ee4768ccf129c972f0f1992906b 671 Gene3D G3DSA:3.40.50.300 269 414 1.3E-52 T 13-10-2018 ambt_12500 22159ee4768ccf129c972f0f1992906b 671 SMART SM00490 460 546 2.3E-19 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_12500 22159ee4768ccf129c972f0f1992906b 671 SUPERFAMILY SSF52540 4 415 1.01E-136 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12500 22159ee4768ccf129c972f0f1992906b 671 Pfam PF02151 UvrB/uvrC motif 633 666 3.0E-8 T 13-10-2018 IPR001943 UVR domain GO:0005515 ambt_12500 22159ee4768ccf129c972f0f1992906b 671 Pfam PF12344 Ultra-violet resistance protein B 552 593 3.8E-19 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain ambt_06485 f1e3c77eb942d9f1f2db764014961bc2 157 Pfam PF02391 MoaE protein 26 123 1.7E-28 T 13-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ambt_06485 f1e3c77eb942d9f1f2db764014961bc2 157 SUPERFAMILY SSF54690 25 153 1.83E-43 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ambt_06485 f1e3c77eb942d9f1f2db764014961bc2 157 Gene3D G3DSA:3.90.1170.40 9 153 2.3E-40 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ambt_12640 d51ab440dd2cfc73398f81b8f1b7c66e 640 SUPERFAMILY SSF52540 75 364 2.94E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12640 d51ab440dd2cfc73398f81b8f1b7c66e 640 Pfam PF08298 PrkA AAA domain 20 376 6.3E-174 T 13-10-2018 IPR013153 PrkA AAA domain ambt_12640 d51ab440dd2cfc73398f81b8f1b7c66e 640 PIRSF PIRSF000549 1 640 4.4E-291 T 13-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 ambt_12640 d51ab440dd2cfc73398f81b8f1b7c66e 640 SMART SM00763 19 376 1.4E-214 T 13-10-2018 IPR013153 PrkA AAA domain ambt_12640 d51ab440dd2cfc73398f81b8f1b7c66e 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 2.0E-73 T 13-10-2018 IPR010650 PrkA C-terminal domain ambt_00645 f1d5f865ecdee74dff21cee2e01a3925 473 SUPERFAMILY SSF161070 5 463 6.02E-112 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 ambt_00645 f1d5f865ecdee74dff21cee2e01a3925 473 Pfam PF00209 Sodium:neurotransmitter symporter family 144 463 3.5E-25 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ambt_00645 f1d5f865ecdee74dff21cee2e01a3925 473 Pfam PF00209 Sodium:neurotransmitter symporter family 5 124 9.4E-24 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ambt_00645 f1d5f865ecdee74dff21cee2e01a3925 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 307 326 1.2E-5 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ambt_00645 f1d5f865ecdee74dff21cee2e01a3925 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 1.2E-5 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ambt_00645 f1d5f865ecdee74dff21cee2e01a3925 473 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 89 115 1.2E-5 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ambt_10090 16742247effb15a5df65b2427bbafd2c 355 Pfam PF03050 Transposase IS66 family 143 353 2.7E-68 T 13-10-2018 IPR004291 Transposase, IS66 ambt_10090 16742247effb15a5df65b2427bbafd2c 355 Pfam PF13007 Transposase C of IS166 homeodomain 7 71 1.4E-13 T 13-10-2018 IPR024463 Transposase TnpC, homeodomain ambt_10090 16742247effb15a5df65b2427bbafd2c 355 Pfam PF13005 zinc-finger binding domain of transposase IS66 79 123 5.9E-18 T 13-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 ambt_00870 a58077afa36d1020189f232cee44c85c 334 Pfam PF03466 LysR substrate binding domain 89 300 8.8E-27 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_00870 a58077afa36d1020189f232cee44c85c 334 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.2E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_00870 a58077afa36d1020189f232cee44c85c 334 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.2E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_00870 a58077afa36d1020189f232cee44c85c 334 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.2E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_00870 a58077afa36d1020189f232cee44c85c 334 SUPERFAMILY SSF46785 2 111 1.22E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_00870 a58077afa36d1020189f232cee44c85c 334 Gene3D G3DSA:3.40.190.290 91 308 1.0E-28 T 13-10-2018 ambt_00870 a58077afa36d1020189f232cee44c85c 334 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.6E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_00870 a58077afa36d1020189f232cee44c85c 334 Gene3D G3DSA:1.10.10.10 1 89 1.0E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_00870 a58077afa36d1020189f232cee44c85c 334 SUPERFAMILY SSF53850 90 305 6.11E-26 T 13-10-2018 ambt_05565 3cee8eb99a49c5b1569c0907d8481bdf 150 Pfam PF07813 LTXXQ motif family protein 35 133 5.4E-11 T 13-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 ambt_05565 3cee8eb99a49c5b1569c0907d8481bdf 150 Gene3D G3DSA:1.20.120.1490 35 148 1.1E-16 T 13-10-2018 ambt_10650 d629f003a4b65e5c591623ed972c06ef 253 Gene3D G3DSA:1.25.40.10 36 214 5.5E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_10650 d629f003a4b65e5c591623ed972c06ef 253 SUPERFAMILY SSF48452 64 174 5.12E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12445 205dba1a4d08fc2a8ddfac2cb01b63fd 233 Pfam PF04893 Yip1 domain 14 224 3.3E-18 T 13-10-2018 IPR006977 Yip1 domain GO:0016020 ambt_02870 95b1ee704734a8e5ee33ff50f0abdd22 183 SUPERFAMILY SSF52317 9 181 1.92E-42 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_02870 95b1ee704734a8e5ee33ff50f0abdd22 183 Pfam PF01965 DJ-1/PfpI family 10 179 4.8E-45 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ambt_02870 95b1ee704734a8e5ee33ff50f0abdd22 183 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 11 182 2.6E-46 T 13-10-2018 IPR006286 Deglycase PfpI ambt_02870 95b1ee704734a8e5ee33ff50f0abdd22 183 Gene3D G3DSA:3.40.50.880 1 183 1.1E-49 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_02220 862b6687c6a65eced7eb071124d76a1d 254 Pfam PF08478 POTRA domain, FtsQ-type 51 119 1.1E-13 T 13-10-2018 IPR013685 POTRA domain, FtsQ-type ambt_02220 862b6687c6a65eced7eb071124d76a1d 254 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 20 241 20.253 T 13-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 ambt_02220 862b6687c6a65eced7eb071124d76a1d 254 Gene3D G3DSA:3.40.50.11690 120 246 3.9E-41 T 13-10-2018 ambt_02220 862b6687c6a65eced7eb071124d76a1d 254 Gene3D G3DSA:3.10.20.310 49 119 7.3E-20 T 13-10-2018 ambt_02220 862b6687c6a65eced7eb071124d76a1d 254 Pfam PF03799 Cell division protein FtsQ 123 233 1.1E-24 T 13-10-2018 IPR005548 Cell division protein FtsQ/DivIB ambt_09150 f59a88953d633eeb72ab3970028c9782 260 PRINTS PR00412 Epoxide hydrolase signature 40 55 7.0E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_09150 f59a88953d633eeb72ab3970028c9782 260 PRINTS PR00412 Epoxide hydrolase signature 97 110 7.0E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_09150 f59a88953d633eeb72ab3970028c9782 260 PRINTS PR00412 Epoxide hydrolase signature 232 254 7.0E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_09150 f59a88953d633eeb72ab3970028c9782 260 Gene3D G3DSA:3.40.50.1820 2 257 1.3E-57 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_09150 f59a88953d633eeb72ab3970028c9782 260 Pfam PF12697 Alpha/beta hydrolase family 17 249 5.1E-17 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_09150 f59a88953d633eeb72ab3970028c9782 260 SUPERFAMILY SSF53474 11 253 1.62E-43 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_09150 f59a88953d633eeb72ab3970028c9782 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 40 55 1.4E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_09150 f59a88953d633eeb72ab3970028c9782 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 96 1.4E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_09150 f59a88953d633eeb72ab3970028c9782 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 1.4E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_09150 f59a88953d633eeb72ab3970028c9782 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 1.4E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_09220 bb8079493c2fea77c4fefc1e9183be80 290 Pfam PF13509 S1 domain 4 76 2.9E-11 T 13-10-2018 IPR039566 Conserved virulence factor B, S1 domain ambt_09220 bb8079493c2fea77c4fefc1e9183be80 290 Gene3D G3DSA:1.10.10.10 227 288 5.6E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_09220 bb8079493c2fea77c4fefc1e9183be80 290 PIRSF PIRSF012524 1 289 5.0E-60 T 13-10-2018 IPR014464 Conserved virulence factor B ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 Gene3D G3DSA:3.30.565.10 323 490 1.1E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 484 4.7E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 SUPERFAMILY SSF47384 244 323 3.34E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 SMART SM00448 514 628 3.6E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 SMART SM00304 198 250 1.2E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 SMART SM00388 258 323 9.4E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 Gene3D G3DSA:1.10.287.130 253 322 7.3E-18 T 13-10-2018 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 Gene3D G3DSA:3.40.50.2300 494 628 3.0E-36 T 13-10-2018 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 Pfam PF00072 Response regulator receiver domain 516 625 1.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 SMART SM00387 370 489 1.7E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 Gene3D G3DSA:1.20.1480.50 158 252 2.9E-7 T 13-10-2018 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 SUPERFAMILY SSF55874 312 483 2.49E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 323 4.7E-19 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 2.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 486 2.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 428 2.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 442 2.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 SUPERFAMILY SSF158472 199 249 1.7E-6 T 13-10-2018 ambt_20440 7c2d7b72ca91ab0d2adb29d6ed6855df 633 SUPERFAMILY SSF52172 513 631 3.27E-32 T 13-10-2018 IPR011006 CheY-like superfamily ambt_05535 c871e40c21bb9e54f98e7df4998b6a44 223 Pfam PF00881 Nitroreductase family 8 197 9.7E-28 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ambt_05535 c871e40c21bb9e54f98e7df4998b6a44 223 Gene3D G3DSA:3.40.109.10 1 222 8.4E-51 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ambt_05535 c871e40c21bb9e54f98e7df4998b6a44 223 SUPERFAMILY SSF55469 1 220 6.02E-38 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ambt_15085 3a390d000b3c5f0f09d79529239d96e0 586 SUPERFAMILY SSF56645 34 291 1.44E-53 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ambt_15085 3a390d000b3c5f0f09d79529239d96e0 586 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 449 2.5E-18 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ambt_15085 3a390d000b3c5f0f09d79529239d96e0 586 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 162 271 2.5E-16 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ambt_15085 3a390d000b3c5f0f09d79529239d96e0 586 Gene3D G3DSA:2.40.110.10 160 280 2.0E-90 T 13-10-2018 ambt_15085 3a390d000b3c5f0f09d79529239d96e0 586 Gene3D G3DSA:1.20.140.10 281 449 2.0E-90 T 13-10-2018 ambt_15085 3a390d000b3c5f0f09d79529239d96e0 586 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 487 578 1.8E-9 T 13-10-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ambt_15085 3a390d000b3c5f0f09d79529239d96e0 586 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 157 7.3E-10 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ambt_15085 3a390d000b3c5f0f09d79529239d96e0 586 Gene3D G3DSA:1.10.540.10 46 159 2.0E-90 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ambt_15085 3a390d000b3c5f0f09d79529239d96e0 586 SUPERFAMILY SSF47203 286 465 1.24E-45 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ambt_16020 ce144e9f11ae704c07c2fef7191814a0 168 Hamap MF_00821 Protein-export protein SecB [secB]. 1 156 33.944 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ambt_16020 ce144e9f11ae704c07c2fef7191814a0 168 Gene3D G3DSA:3.10.420.10 3 167 7.1E-59 T 13-10-2018 IPR035958 SecB-like superfamily ambt_16020 ce144e9f11ae704c07c2fef7191814a0 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 134 152 1.9E-37 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ambt_16020 ce144e9f11ae704c07c2fef7191814a0 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 108 130 1.9E-37 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ambt_16020 ce144e9f11ae704c07c2fef7191814a0 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 24 41 1.9E-37 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ambt_16020 ce144e9f11ae704c07c2fef7191814a0 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 84 104 1.9E-37 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ambt_16020 ce144e9f11ae704c07c2fef7191814a0 168 Pfam PF02556 Preprotein translocase subunit SecB 16 154 1.5E-57 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ambt_16020 ce144e9f11ae704c07c2fef7191814a0 168 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 18 154 1.4E-60 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ambt_16020 ce144e9f11ae704c07c2fef7191814a0 168 SUPERFAMILY SSF54611 10 151 1.48E-54 T 13-10-2018 IPR035958 SecB-like superfamily ambt_10355 bf99f3716de6459a74027f64f67483ba 281 Gene3D G3DSA:1.10.3210.10 1 269 1.6E-57 T 13-10-2018 ambt_10355 bf99f3716de6459a74027f64f67483ba 281 SUPERFAMILY SSF109604 3 259 1.26E-54 T 13-10-2018 ambt_10355 bf99f3716de6459a74027f64f67483ba 281 Pfam PF08668 HDOD domain 15 204 2.0E-50 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD ambt_02985 6a9ca0a1e2f7aba442e289d1f45dc299 130 SUPERFAMILY SSF46785 8 128 6.07E-35 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_02985 6a9ca0a1e2f7aba442e289d1f45dc299 130 Gene3D G3DSA:1.10.10.10 9 75 9.9E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_02985 6a9ca0a1e2f7aba442e289d1f45dc299 130 PIRSF PIRSF019455 2 130 7.6E-42 T 13-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 ambt_02985 6a9ca0a1e2f7aba442e289d1f45dc299 130 Pfam PF03965 Penicillinase repressor 10 124 1.2E-36 T 13-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 ambt_02985 6a9ca0a1e2f7aba442e289d1f45dc299 130 Gene3D G3DSA:1.10.4040.10 76 128 3.0E-14 T 13-10-2018 ambt_03080 257a0874b91b1e8d42181f5d8dcc9869 190 Gene3D G3DSA:3.10.129.10 2 168 2.3E-48 T 13-10-2018 ambt_03080 257a0874b91b1e8d42181f5d8dcc9869 190 Pfam PF03061 Thioesterase superfamily 25 98 3.0E-17 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ambt_03080 257a0874b91b1e8d42181f5d8dcc9869 190 SUPERFAMILY SSF54637 8 157 1.24E-40 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_04460 4d2d91f1a303cb41eb21ab93b7ab1e09 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_04460 4d2d91f1a303cb41eb21ab93b7ab1e09 327 Pfam PF01479 S4 domain 22 63 1.8E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_04460 4d2d91f1a303cb41eb21ab93b7ab1e09 327 SMART SM00363 21 84 1.4E-5 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_04460 4d2d91f1a303cb41eb21ab93b7ab1e09 327 Pfam PF00849 RNA pseudouridylate synthase 95 245 2.7E-31 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_04460 4d2d91f1a303cb41eb21ab93b7ab1e09 327 Gene3D G3DSA:3.30.2350.10 87 318 4.8E-72 T 13-10-2018 ambt_04460 4d2d91f1a303cb41eb21ab93b7ab1e09 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 315 7.1E-101 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_04460 4d2d91f1a303cb41eb21ab93b7ab1e09 327 Gene3D G3DSA:3.10.290.10 6 78 4.5E-18 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ambt_04460 4d2d91f1a303cb41eb21ab93b7ab1e09 327 SUPERFAMILY SSF55120 82 318 4.32E-78 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_04460 4d2d91f1a303cb41eb21ab93b7ab1e09 327 SUPERFAMILY SSF55174 21 73 4.88E-10 T 13-10-2018 ambt_13585 1b20f9eb2676915dbf75d97b86eb0fe7 196 SUPERFAMILY SSF160443 98 180 1.03E-7 T 13-10-2018 IPR036063 Smr domain superfamily ambt_13585 1b20f9eb2676915dbf75d97b86eb0fe7 196 Gene3D G3DSA:3.30.1370.110 50 186 1.0E-35 T 13-10-2018 ambt_13585 1b20f9eb2676915dbf75d97b86eb0fe7 196 SMART SM00463 96 180 7.2E-5 T 13-10-2018 IPR002625 Smr domain ambt_13585 1b20f9eb2676915dbf75d97b86eb0fe7 196 Pfam PF01713 Smr domain 101 180 3.1E-14 T 13-10-2018 IPR002625 Smr domain ambt_11145 6e401b228a0f5d4a2f9a2277ffe2a58d 123 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 121 2.5E-40 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB ambt_11145 6e401b228a0f5d4a2f9a2277ffe2a58d 123 PIRSF PIRSF005610 1 119 1.2E-23 T 13-10-2018 IPR007360 Invasion gene expression up-regulator, SirB ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 Gene3D G3DSA:1.20.1640.10 12 506 6.3E-259 T 13-10-2018 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 SUPERFAMILY SSF82866 301 491 1.57E-40 T 13-10-2018 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 Gene3D G3DSA:3.30.70.1320 135 327 6.3E-259 T 13-10-2018 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 Gene3D G3DSA:3.30.2090.10 178 269 6.3E-259 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 Gene3D G3DSA:3.30.70.1430 558 659 6.3E-259 T 13-10-2018 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 Gene3D G3DSA:3.30.70.1430 41 806 6.3E-259 T 13-10-2018 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 SUPERFAMILY SSF82693 41 133 1.36E-15 T 13-10-2018 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 SUPERFAMILY SSF82866 796 1015 1.31E-50 T 13-10-2018 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 SUPERFAMILY SSF82693 558 627 9.94E-5 T 13-10-2018 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 Gene3D G3DSA:3.30.2090.10 711 798 6.3E-259 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 Gene3D G3DSA:1.20.1640.10 507 1009 6.3E-259 T 13-10-2018 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 SUPERFAMILY SSF82693 137 321 7.59E-15 T 13-10-2018 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 8.6E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 8.6E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 8.6E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 8.6E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 8.6E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 8.6E-23 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 SUPERFAMILY SSF82714 184 264 3.79E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 SUPERFAMILY SSF82714 715 794 1.26E-12 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 Pfam PF00873 AcrB/AcrD/AcrF family 4 1012 9.2E-178 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_20910 a9d850e41953c6d59b1fb1111053f94d 1022 Gene3D G3DSA:3.30.70.1440 660 855 6.3E-259 T 13-10-2018 ambt_13735 fe2180e1549b00843505a77143718bfe 127 Pfam PF04287 tRNA pseudouridine synthase C 30 120 6.2E-25 T 13-10-2018 IPR023376 YqcC-like domain ambt_13735 fe2180e1549b00843505a77143718bfe 127 Gene3D G3DSA:1.20.1440.40 23 123 1.3E-23 T 13-10-2018 IPR036814 YqcC-like superfamily ambt_13735 fe2180e1549b00843505a77143718bfe 127 SUPERFAMILY SSF158452 25 123 3.4E-25 T 13-10-2018 IPR036814 YqcC-like superfamily ambt_01195 e7aef4f765c93678347c38670f1485cc 299 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 136 286 1.3E-6 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_01195 e7aef4f765c93678347c38670f1485cc 299 Gene3D G3DSA:3.40.190.10 28 96 1.9E-11 T 13-10-2018 ambt_01195 e7aef4f765c93678347c38670f1485cc 299 SUPERFAMILY SSF53850 31 288 3.76E-24 T 13-10-2018 ambt_01195 e7aef4f765c93678347c38670f1485cc 299 Gene3D G3DSA:3.40.190.10 136 286 6.9E-7 T 13-10-2018 ambt_01195 e7aef4f765c93678347c38670f1485cc 299 Gene3D G3DSA:3.40.190.10 147 247 6.9E-7 T 13-10-2018 ambt_01195 e7aef4f765c93678347c38670f1485cc 299 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 85 3.1E-8 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_07225 82ec9d5c49e7262feb4bc5dbe6893541 140 SUPERFAMILY SSF81296 21 115 9.8E-20 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_07225 82ec9d5c49e7262feb4bc5dbe6893541 140 Pfam PF04234 CopC domain 22 114 7.8E-17 T 13-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 ambt_07225 82ec9d5c49e7262feb4bc5dbe6893541 140 Gene3D G3DSA:2.60.40.1220 22 120 8.0E-17 T 13-10-2018 ambt_20065 338a6b80914d6a8b035390a7a5cc4bfb 414 Gene3D G3DSA:1.20.1250.20 14 217 5.3E-53 T 13-10-2018 ambt_20065 338a6b80914d6a8b035390a7a5cc4bfb 414 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 99 400 4.9E-110 T 13-10-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0015757|GO:0016021|GO:1904659 ambt_20065 338a6b80914d6a8b035390a7a5cc4bfb 414 SUPERFAMILY SSF103473 15 400 4.84E-37 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_20065 338a6b80914d6a8b035390a7a5cc4bfb 414 Pfam PF07690 Major Facilitator Superfamily 18 359 2.5E-15 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_20065 338a6b80914d6a8b035390a7a5cc4bfb 414 Gene3D G3DSA:1.20.1250.20 220 406 1.7E-61 T 13-10-2018 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 Pfam PF03104 DNA polymerase family B, exonuclease domain 33 302 1.4E-15 T 13-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 SUPERFAMILY SSF53098 20 392 3.61E-60 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 Pfam PF00136 DNA polymerase family B 404 760 1.0E-37 T 13-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 Gene3D G3DSA:1.10.132.60 643 787 1.3E-56 T 13-10-2018 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 SMART SM00486 154 558 1.7E-55 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 Gene3D G3DSA:3.30.70.2250 45 112 1.1E-32 T 13-10-2018 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 Gene3D G3DSA:3.30.420.10 157 352 7.4E-59 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 420 433 1.5E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.5E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.5E-10 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 Gene3D G3DSA:3.90.1600.10 353 445 9.9E-23 T 13-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 Gene3D G3DSA:3.90.1600.10 453 636 1.2E-48 T 13-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 Gene3D G3DSA:2.40.50.590 5 154 1.1E-32 T 13-10-2018 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 13-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ambt_00830 af5bb6f89fb7455b9e0ad610900d899c 789 SUPERFAMILY SSF56672 395 781 1.78E-110 T 13-10-2018 ambt_03725 460d60c044fc10af4318e262f429217e 531 Pfam PF00463 Isocitrate lyase family 97 268 2.6E-21 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ambt_03725 460d60c044fc10af4318e262f429217e 531 Pfam PF00463 Isocitrate lyase family 432 529 7.9E-12 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ambt_03725 460d60c044fc10af4318e262f429217e 531 Pfam PF00463 Isocitrate lyase family 316 393 4.3E-10 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ambt_03725 460d60c044fc10af4318e262f429217e 531 PIRSF PIRSF001362 419 530 1.2E-6 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ambt_03725 460d60c044fc10af4318e262f429217e 531 PIRSF PIRSF001362 288 408 2.5E-13 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ambt_03725 460d60c044fc10af4318e262f429217e 531 PIRSF PIRSF001362 1 289 6.2E-30 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ambt_03725 460d60c044fc10af4318e262f429217e 531 SUPERFAMILY SSF51621 11 513 1.66E-124 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ambt_10205 52022513e94ee97a57bf158c78e02cb8 378 SUPERFAMILY SSF46689 330 377 2.72E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_10205 52022513e94ee97a57bf158c78e02cb8 378 Gene3D G3DSA:1.10.10.60 279 378 1.2E-14 T 13-10-2018 ambt_10205 52022513e94ee97a57bf158c78e02cb8 378 SMART SM00342 294 376 7.2E-9 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_10205 52022513e94ee97a57bf158c78e02cb8 378 Pfam PF12833 Helix-turn-helix domain 300 378 6.7E-10 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_16070 6d68ddc3f8e78a855fbd2e285f252456 136 Gene3D G3DSA:3.40.50.1380 1 136 1.9E-57 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ambt_16070 6d68ddc3f8e78a855fbd2e285f252456 136 SUPERFAMILY SSF52335 3 130 9.84E-51 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ambt_16070 6d68ddc3f8e78a855fbd2e285f252456 136 Pfam PF02142 MGS-like domain 18 109 1.1E-16 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain ambt_16070 6d68ddc3f8e78a855fbd2e285f252456 136 ProSitePatterns PS01335 Methylglyoxal synthase active site. 57 65 - T 13-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 ambt_16070 6d68ddc3f8e78a855fbd2e285f252456 136 SMART SM00851 17 110 3.4E-19 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain ambt_16070 6d68ddc3f8e78a855fbd2e285f252456 136 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 5 124 1.5E-55 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 ambt_16070 6d68ddc3f8e78a855fbd2e285f252456 136 PIRSF PIRSF006614 1 136 3.0E-59 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 ambt_16070 6d68ddc3f8e78a855fbd2e285f252456 136 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 4 123 32.665 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 ambt_17485 1cdf8277e05ba58a089d83c1d1b17e95 231 Gene3D G3DSA:3.30.450.40 58 228 4.2E-34 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_17485 1cdf8277e05ba58a089d83c1d1b17e95 231 Pfam PF04340 Protein of unknown function, DUF484 23 225 1.6E-41 T 13-10-2018 IPR007435 Protein of unknown function DUF484 ambt_01015 d9c2a07d1982bcd03a09688822334799 285 Gene3D G3DSA:3.40.50.410 88 274 2.3E-13 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_01015 d9c2a07d1982bcd03a09688822334799 285 SUPERFAMILY SSF53300 96 269 2.08E-13 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_01015 d9c2a07d1982bcd03a09688822334799 285 Pfam PF13519 von Willebrand factor type A domain 98 214 9.9E-7 T 13-10-2018 IPR002035 von Willebrand factor, type A ambt_18395 0463639cf7ffdff731049047e9075e7e 449 SUPERFAMILY SSF102114 55 367 1.7E-47 T 13-10-2018 ambt_18395 0463639cf7ffdff731049047e9075e7e 449 Pfam PF04055 Radical SAM superfamily 98 258 6.6E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_18395 0463639cf7ffdff731049047e9075e7e 449 Gene3D G3DSA:3.20.20.70 34 396 2.7E-52 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_18395 0463639cf7ffdff731049047e9075e7e 449 Hamap MF_01612 FO synthase subunit 2 [cofH]. 42 403 45.328 T 13-10-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77 ambt_18395 0463639cf7ffdff731049047e9075e7e 449 TIGRFAM TIGR03551 F420_cofH: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 56 401 5.6E-141 T 13-10-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77 ambt_18395 0463639cf7ffdff731049047e9075e7e 449 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 91 401 1.5E-111 T 13-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 ambt_20350 0421cfac576efe2de683ffbd136bb254 225 SUPERFAMILY SSF109998 28 109 8.24E-5 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 Gene3D G3DSA:3.30.499.20 4 285 2.4E-95 T 13-10-2018 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 ProSitePatterns PS00450 Aconitase family signature 1. 338 354 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 Gene3D G3DSA:3.30.499.10 327 466 1.2E-49 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 ProSitePatterns PS01244 Aconitase family signature 2. 398 411 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 1.7E-242 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 SUPERFAMILY SSF53732 2 464 1.57E-159 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 456 1.3E-153 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 PRINTS PR00415 Aconitase family signature 342 353 5.6E-46 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 PRINTS PR00415 Aconitase family signature 81 94 5.6E-46 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 PRINTS PR00415 Aconitase family signature 107 115 5.6E-46 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 PRINTS PR00415 Aconitase family signature 118 131 5.6E-46 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 PRINTS PR00415 Aconitase family signature 194 207 5.6E-46 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 PRINTS PR00415 Aconitase family signature 285 299 5.6E-46 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 PRINTS PR00415 Aconitase family signature 208 221 5.6E-46 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 PRINTS PR00415 Aconitase family signature 398 411 5.6E-46 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 PRINTS PR00415 Aconitase family signature 132 147 5.6E-46 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ambt_14010 9a75aa87b6fc7d5732c52dfecb818efa 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 59.02 T 13-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ambt_21860 32c85000dde2e0b245a085b0fdad357d 824 SUPERFAMILY SSF55486 373 601 1.59E-39 T 13-10-2018 ambt_21860 32c85000dde2e0b245a085b0fdad357d 824 Pfam PF01433 Peptidase family M1 domain 374 595 9.2E-13 T 13-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ambt_21860 32c85000dde2e0b245a085b0fdad357d 824 Gene3D G3DSA:1.10.390.60 372 599 9.7E-28 T 13-10-2018 ambt_05285 bc643b0bc0c63bca9d13c9ca2521fdca 292 SUPERFAMILY SSF56349 25 292 2.18E-14 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_05285 bc643b0bc0c63bca9d13c9ca2521fdca 292 Gene3D G3DSA:1.10.443.10 115 292 3.0E-14 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_05285 bc643b0bc0c63bca9d13c9ca2521fdca 292 Pfam PF00589 Phage integrase family 127 291 1.8E-5 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_06675 ff6181cfcbf6c859d7f7ea84dbed1a88 331 Pfam PF00072 Response regulator receiver domain 11 120 2.2E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_06675 ff6181cfcbf6c859d7f7ea84dbed1a88 331 SUPERFAMILY SSF109604 131 317 1.19E-41 T 13-10-2018 ambt_06675 ff6181cfcbf6c859d7f7ea84dbed1a88 331 SMART SM00471 150 287 4.8E-8 T 13-10-2018 IPR003607 HD/PDEase domain ambt_06675 ff6181cfcbf6c859d7f7ea84dbed1a88 331 Gene3D G3DSA:3.40.50.2300 3 132 1.1E-38 T 13-10-2018 ambt_06675 ff6181cfcbf6c859d7f7ea84dbed1a88 331 SMART SM00448 8 120 7.9E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_06675 ff6181cfcbf6c859d7f7ea84dbed1a88 331 SUPERFAMILY SSF52172 5 131 1.25E-38 T 13-10-2018 IPR011006 CheY-like superfamily ambt_06675 ff6181cfcbf6c859d7f7ea84dbed1a88 331 Pfam PF01966 HD domain 157 277 2.0E-16 T 13-10-2018 IPR006674 HD domain ambt_06675 ff6181cfcbf6c859d7f7ea84dbed1a88 331 Gene3D G3DSA:1.10.3210.10 133 331 3.8E-74 T 13-10-2018 ambt_01855 47b8a42d2d53ce91428d4cfc3cd92fda 400 SUPERFAMILY SSF51735 1 189 4.19E-18 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_01855 47b8a42d2d53ce91428d4cfc3cd92fda 400 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 139 386 2.2E-38 T 13-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 ambt_01855 47b8a42d2d53ce91428d4cfc3cd92fda 400 Gene3D G3DSA:3.30.360.10 149 345 3.2E-146 T 13-10-2018 ambt_01855 47b8a42d2d53ce91428d4cfc3cd92fda 400 Gene3D G3DSA:3.40.50.720 5 388 3.2E-146 T 13-10-2018 ambt_01855 47b8a42d2d53ce91428d4cfc3cd92fda 400 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 135 1.1E-30 T 13-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 ambt_02035 3b3cee9ba41daef89695079ee1b99dad 228 Gene3D G3DSA:3.20.20.10 1 228 5.9E-84 T 13-10-2018 IPR029066 PLP-binding barrel ambt_02035 3b3cee9ba41daef89695079ee1b99dad 228 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 227 2.7E-83 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ambt_02035 3b3cee9ba41daef89695079ee1b99dad 228 PIRSF PIRSF004848 1 228 1.5E-76 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ambt_02035 3b3cee9ba41daef89695079ee1b99dad 228 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 77 91 - T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ambt_02035 3b3cee9ba41daef89695079ee1b99dad 228 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 226 32.74 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ambt_02035 3b3cee9ba41daef89695079ee1b99dad 228 SUPERFAMILY SSF51419 1 225 1.31E-79 T 13-10-2018 IPR029066 PLP-binding barrel ambt_02035 3b3cee9ba41daef89695079ee1b99dad 228 Pfam PF01168 Alanine racemase, N-terminal domain 20 227 7.2E-31 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ambt_19100 3cde7ea049d8e91e7a0ef38cb990bbf6 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 30.542 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19100 3cde7ea049d8e91e7a0ef38cb990bbf6 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19100 3cde7ea049d8e91e7a0ef38cb990bbf6 130 Gene3D G3DSA:3.30.1370.30 2 72 3.6E-26 T 13-10-2018 ambt_19100 3cde7ea049d8e91e7a0ef38cb990bbf6 130 Pfam PF00410 Ribosomal protein S8 5 129 2.7E-47 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19100 3cde7ea049d8e91e7a0ef38cb990bbf6 130 Gene3D G3DSA:3.30.1490.10 73 130 3.6E-23 T 13-10-2018 ambt_19100 3cde7ea049d8e91e7a0ef38cb990bbf6 130 SUPERFAMILY SSF56047 2 129 4.58E-45 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_21355 426f0dfc7e93afbd35859b0efc654113 391 Gene3D G3DSA:1.20.1250.20 2 192 4.9E-22 T 13-10-2018 ambt_21355 426f0dfc7e93afbd35859b0efc654113 391 SUPERFAMILY SSF103473 3 386 1.7E-43 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_21355 426f0dfc7e93afbd35859b0efc654113 391 Pfam PF07690 Major Facilitator Superfamily 11 324 1.6E-23 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_21355 426f0dfc7e93afbd35859b0efc654113 391 Gene3D G3DSA:1.20.1250.20 197 385 1.9E-21 T 13-10-2018 ambt_10040 7bceeca8b5d595628d457c7e72595875 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.5E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_10040 7bceeca8b5d595628d457c7e72595875 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.5E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_10040 7bceeca8b5d595628d457c7e72595875 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 1.2E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_10040 7bceeca8b5d595628d457c7e72595875 187 SUPERFAMILY SSF46689 4 69 2.46E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_10040 7bceeca8b5d595628d457c7e72595875 187 Gene3D G3DSA:1.10.357.10 1 180 2.4E-30 T 13-10-2018 ambt_12530 c77a617f74641d2abc253591b4c5562f 222 PIRSF PIRSF006091 1 207 1.8E-78 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 ambt_12530 c77a617f74641d2abc253591b4c5562f 222 Pfam PF04205 FMN-binding domain 101 190 1.5E-19 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 ambt_12530 c77a617f74641d2abc253591b4c5562f 222 SMART SM00900 101 193 2.7E-33 T 13-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 ambt_12530 c77a617f74641d2abc253591b4c5562f 222 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 194 9.1E-64 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 ambt_12530 c77a617f74641d2abc253591b4c5562f 222 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 3 195 27.078 T 13-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 ambt_13580 defb19b9a899d1f059526e67f169b516 6369 ProSitePatterns PS00018 EF-hand calcium-binding domain. 5719 5731 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 4325 4398 1.6E-13 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 1488 1571 8.7E-13 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 3638 3714 2.2E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 4925 5003 2.1E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 4154 4227 1.6E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 3811 3885 4.6E-13 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 2983 3070 2.5E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 928 1010 4.1E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 3982 4057 9.9E-13 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 4667 4740 1.1E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 3265 3348 1.8E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 1673 1758 4.2E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 4496 4569 6.5E-13 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 3603 3627 0.18 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 3044 3066 0.004 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 1453 1480 1.9 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 2575 2600 3.6 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 518 541 0.015 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 1082 1101 1.3 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 3858 3883 2.2 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 3137 3160 0.52 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 3105 3122 1.8 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 3293 3310 3.8 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 1919 1945 0.11 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 2949 2972 0.35 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 615 642 1.4E-4 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 708 731 1.6 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 5184 5207 0.048 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 425 448 0.0091 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 2385 2411 0.86 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 3323 3347 1.0 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 2174 2188 2.4 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 2293 2318 0.019 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 2639 2656 2.8 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 2763 2786 0.067 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 1266 1290 0.0046 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 1733 1755 0.61 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 2860 2882 0.079 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 1176 1195 0.015 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 585 602 2.7 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 2019 2040 0.023 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF12245 Bacterial Ig-like domain (group 3) 2482 2505 1.1 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Pfam PF13750 Bacterial Ig-like domain (group 3) 241 357 0.0082 T 13-10-2018 IPR022038 Bacterial Ig-like domain ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 3725 3810 6.7E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 3171 3264 3.3E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 4579 4666 7.6E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 4235 4324 4.0E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 1865 1954 6.9E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 1394 1487 1.1E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 737 836 3.2E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 4065 4153 1.5E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 4839 4924 4.3E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 3895 3981 1.5E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 4750 4838 3.4E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 4408 4495 1.7E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 837 925 3.9E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 1206 1297 8.7E-15 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 2140 2232 2.9E-14 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 2421 2513 5.1E-13 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 2233 2326 9.7E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 1575 1671 1.6E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 2606 2700 6.0E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 2050 2139 2.5E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 5004 5097 5.5E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 1110 1204 6.3E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 5105 5208 2.9E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 270 362 1.1E-14 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 1019 1109 2.4E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 3448 3543 9.1E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 176 269 3.2E-15 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 2516 2605 7.5E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 455 546 8.9E-15 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 2328 2420 3.2E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 648 736 5.7E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 1955 2045 1.4E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 3546 3636 1.5E-13 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 2701 2795 3.2E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 547 647 4.2E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 1299 1393 3.9E-14 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 3078 3168 6.5E-9 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 363 454 9.1E-15 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 2796 2886 6.8E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 1771 1858 1.3E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 2887 2982 2.7E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 Gene3D G3DSA:2.60.40.10 3351 3447 1.0E-11 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_13580 defb19b9a899d1f059526e67f169b516 6369 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 5513 5584 7.8E-4 T 13-10-2018 IPR010221 VCBS repeat ambt_13580 defb19b9a899d1f059526e67f169b516 6369 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 6147 6198 4.9E-4 T 13-10-2018 IPR010221 VCBS repeat ambt_13580 defb19b9a899d1f059526e67f169b516 6369 ProSitePatterns PS00018 EF-hand calcium-binding domain. 5348 5360 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_17375 5351dbe90fd8540730d689b77afd4cd0 351 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 5 176 7.3E-70 T 13-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ambt_17375 5351dbe90fd8540730d689b77afd4cd0 351 SUPERFAMILY SSF54197 5 176 5.95E-69 T 13-10-2018 IPR036265 HIT-like superfamily ambt_17375 5351dbe90fd8540730d689b77afd4cd0 351 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 346 2.6E-162 T 13-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ambt_17375 5351dbe90fd8540730d689b77afd4cd0 351 Gene3D G3DSA:3.30.428.10 46 175 3.9E-53 T 13-10-2018 IPR036265 HIT-like superfamily ambt_17375 5351dbe90fd8540730d689b77afd4cd0 351 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 188 346 1.1E-60 T 13-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ambt_17375 5351dbe90fd8540730d689b77afd4cd0 351 PIRSF PIRSF000808 1 340 2.4E-116 T 13-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ambt_17375 5351dbe90fd8540730d689b77afd4cd0 351 Gene3D G3DSA:3.30.428.10 176 350 6.7E-67 T 13-10-2018 IPR036265 HIT-like superfamily ambt_17375 5351dbe90fd8540730d689b77afd4cd0 351 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 13-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ambt_17375 5351dbe90fd8540730d689b77afd4cd0 351 SUPERFAMILY SSF54197 184 343 6.46E-46 T 13-10-2018 IPR036265 HIT-like superfamily ambt_06720 9f5bd260dc5483ff82d92647af32d7df 304 Gene3D G3DSA:3.30.450.20 7 106 5.1E-6 T 13-10-2018 ambt_06720 9f5bd260dc5483ff82d92647af32d7df 304 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 134 296 3.2E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_06720 9f5bd260dc5483ff82d92647af32d7df 304 Pfam PF00990 Diguanylate cyclase, GGDEF domain 136 293 4.6E-41 T 13-10-2018 IPR000160 GGDEF domain ambt_06720 9f5bd260dc5483ff82d92647af32d7df 304 Gene3D G3DSA:3.30.70.270 121 299 6.5E-49 T 13-10-2018 ambt_06720 9f5bd260dc5483ff82d92647af32d7df 304 SUPERFAMILY SSF55785 7 94 1.8E-6 T 13-10-2018 IPR035965 PAS domain superfamily ambt_06720 9f5bd260dc5483ff82d92647af32d7df 304 SUPERFAMILY SSF55073 140 299 1.57E-41 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_06720 9f5bd260dc5483ff82d92647af32d7df 304 SMART SM00267 124 297 1.6E-50 T 13-10-2018 IPR000160 GGDEF domain ambt_13250 5864781bc8d446566e29b8a777ae8692 133 SUPERFAMILY SSF101801 51 131 2.35E-24 T 13-10-2018 IPR036429 SpoA-like superfamily ambt_13250 5864781bc8d446566e29b8a777ae8692 133 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 51 124 4.0E-33 T 13-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 ambt_13250 5864781bc8d446566e29b8a777ae8692 133 Gene3D G3DSA:2.30.330.10 30 133 1.1E-33 T 13-10-2018 IPR036429 SpoA-like superfamily ambt_13250 5864781bc8d446566e29b8a777ae8692 133 PRINTS PR00956 Flagellar motor switch protein FliN signature 99 114 1.9E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ambt_13250 5864781bc8d446566e29b8a777ae8692 133 PRINTS PR00956 Flagellar motor switch protein FliN signature 53 69 1.9E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ambt_13250 5864781bc8d446566e29b8a777ae8692 133 PRINTS PR00956 Flagellar motor switch protein FliN signature 86 99 1.9E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ambt_13250 5864781bc8d446566e29b8a777ae8692 133 PRINTS PR00956 Flagellar motor switch protein FliN signature 70 86 1.9E-28 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ambt_13250 5864781bc8d446566e29b8a777ae8692 133 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 53 123 6.8E-25 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) ambt_10710 29c08ea0709b97eba05e6d33a262a081 407 Pfam PF11279 Protein of unknown function (DUF3080) 69 404 4.9E-110 T 13-10-2018 IPR021431 Protein of unknown function DUF3080 ambt_19410 68cdca149603e2eb1e7f45260afdd9c2 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 6.9E-60 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ambt_19410 68cdca149603e2eb1e7f45260afdd9c2 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 4 143 1.4E-52 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ambt_19410 68cdca149603e2eb1e7f45260afdd9c2 145 SUPERFAMILY SSF69500 1 144 3.79E-53 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily ambt_19410 68cdca149603e2eb1e7f45260afdd9c2 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.687 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ambt_19410 68cdca149603e2eb1e7f45260afdd9c2 145 Gene3D G3DSA:3.50.80.10 1 145 1.9E-54 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily ambt_21570 8ef1eaae75684e590b1af67203c6f4d8 243 Pfam PF01695 IstB-like ATP binding protein 56 232 5.1E-59 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ambt_21570 8ef1eaae75684e590b1af67203c6f4d8 243 Pfam PF08483 IstB-like ATP binding N-terminal 27 55 6.2E-10 T 13-10-2018 IPR013690 IstB-like ATP binding N-terminal ambt_21570 8ef1eaae75684e590b1af67203c6f4d8 243 SUPERFAMILY SSF52540 98 239 2.44E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_21570 8ef1eaae75684e590b1af67203c6f4d8 243 PIRSF PIRSF003073 1 243 3.1E-70 T 13-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein ambt_21570 8ef1eaae75684e590b1af67203c6f4d8 243 Gene3D G3DSA:3.40.50.300 64 243 9.6E-46 T 13-10-2018 ambt_14070 f52e78d891dfd4d340df10d266de8cfe 163 Pfam PF00989 PAS fold 17 72 1.6E-6 T 13-10-2018 IPR013767 PAS fold GO:0006355 ambt_14070 f52e78d891dfd4d340df10d266de8cfe 163 Gene3D G3DSA:3.30.450.20 10 140 7.3E-34 T 13-10-2018 ambt_14070 f52e78d891dfd4d340df10d266de8cfe 163 SUPERFAMILY SSF55785 16 128 3.32E-9 T 13-10-2018 IPR035965 PAS domain superfamily ambt_14070 f52e78d891dfd4d340df10d266de8cfe 163 SMART SM00091 12 78 1.0E-4 T 13-10-2018 IPR000014 PAS domain ambt_21650 d946b1426448a13b1cbf0c5e3433a058 874 Pfam PF00246 Zinc carboxypeptidase 84 254 2.0E-18 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_21650 d946b1426448a13b1cbf0c5e3433a058 874 SUPERFAMILY SSF52317 633 868 1.26E-12 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_21650 d946b1426448a13b1cbf0c5e3433a058 874 Gene3D G3DSA:3.40.630.10 71 345 8.9E-35 T 13-10-2018 ambt_21650 d946b1426448a13b1cbf0c5e3433a058 874 SUPERFAMILY SSF53187 72 357 9.26E-57 T 13-10-2018 ambt_21650 d946b1426448a13b1cbf0c5e3433a058 874 SMART SM00631 76 359 0.001 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_20835 091912e69973a5b0f4b1772b50d809aa 232 Pfam PF11444 Protein of unknown function (DUF2895) 18 210 2.4E-76 T 13-10-2018 IPR021548 Protein of unknown function DUF2895 ambt_20835 091912e69973a5b0f4b1772b50d809aa 232 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 14 210 7.0E-72 T 13-10-2018 IPR021548 Protein of unknown function DUF2895 ambt_18945 dc6c8e870ab002849b9489f058bb8d5c 245 PIRSF PIRSF028162 1 242 1.8E-85 T 13-10-2018 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted ambt_18945 dc6c8e870ab002849b9489f058bb8d5c 245 Gene3D G3DSA:3.90.550.10 1 243 1.1E-56 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18945 dc6c8e870ab002849b9489f058bb8d5c 245 SUPERFAMILY SSF53448 2 237 5.86E-21 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_20885 5162c8402da2261d4be59ec228ef60ec 399 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 9 398 1.5E-128 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ambt_20885 5162c8402da2261d4be59ec228ef60ec 399 Pfam PF03616 Sodium/glutamate symporter 8 369 2.8E-115 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ambt_20885 5162c8402da2261d4be59ec228ef60ec 399 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 4 399 23.006 T 13-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 ambt_10300 567c1f4c354e7d838c733b275ea71486 292 Pfam PF00682 HMGL-like 2 270 4.3E-52 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ambt_10300 567c1f4c354e7d838c733b275ea71486 292 Gene3D G3DSA:3.20.20.70 1 291 3.3E-127 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_10300 567c1f4c354e7d838c733b275ea71486 292 SUPERFAMILY SSF51569 1 283 1.83E-68 T 13-10-2018 ambt_08810 d5233507d81bebba6f036b48e0f3cec2 480 Pfam PF12040 Domain of unknown function (DUF3526) 274 442 1.1E-37 T 13-10-2018 IPR021913 Protein of unknown function DUF3526 ambt_08810 d5233507d81bebba6f036b48e0f3cec2 480 Pfam PF12679 ABC-2 family transporter protein 124 267 8.3E-15 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 ambt_00535 47404389a5965ffffbb0a08c27db75ed 337 Gene3D G3DSA:3.40.50.1100 56 152 6.6E-95 T 13-10-2018 ambt_00535 47404389a5965ffffbb0a08c27db75ed 337 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 310 7.1E-68 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ambt_00535 47404389a5965ffffbb0a08c27db75ed 337 Gene3D G3DSA:3.40.50.1100 19 314 6.6E-95 T 13-10-2018 ambt_00535 47404389a5965ffffbb0a08c27db75ed 337 SUPERFAMILY SSF53686 9 314 1.07E-79 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 PRINTS PR00395 Ribosomal protein S2 signature 37 46 4.2E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 PRINTS PR00395 Ribosomal protein S2 signature 175 186 4.2E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 PRINTS PR00395 Ribosomal protein S2 signature 87 104 4.2E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 PRINTS PR00395 Ribosomal protein S2 signature 6 24 4.2E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 PRINTS PR00395 Ribosomal protein S2 signature 158 175 4.2E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 PRINTS PR00395 Ribosomal protein S2 signature 196 210 4.2E-38 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 Pfam PF00318 Ribosomal protein S2 9 224 1.7E-96 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 Gene3D G3DSA:1.10.287.610 103 150 2.7E-95 T 13-10-2018 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 7.0E-109 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 SUPERFAMILY SSF52313 6 231 6.28E-98 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 Gene3D G3DSA:3.40.50.10490 8 219 2.7E-95 T 13-10-2018 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 ambt_13705 c2d0a0133a2101213ea137f30c6357b5 243 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 42.4 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_09540 474a6620bcb8db5b10ca8b26348e4d36 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.267 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ambt_09540 474a6620bcb8db5b10ca8b26348e4d36 156 PIRSF PIRSF004505 1 155 7.6E-39 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ambt_09540 474a6620bcb8db5b10ca8b26348e4d36 156 Gene3D G3DSA:3.40.1280.10 1 156 4.8E-49 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ambt_09540 474a6620bcb8db5b10ca8b26348e4d36 156 SUPERFAMILY SSF75217 2 154 2.77E-48 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases ambt_09540 474a6620bcb8db5b10ca8b26348e4d36 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 6.0E-45 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ambt_09540 474a6620bcb8db5b10ca8b26348e4d36 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 1.7E-74 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ambt_04270 4bd5ce574e70aaad1fac89bcd221d696 146 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 143 2.2E-27 T 13-10-2018 ambt_04270 4bd5ce574e70aaad1fac89bcd221d696 146 PIRSF PIRSF004923 1 146 5.9E-35 T 13-10-2018 IPR026268 Protein RseC ambt_17465 f19cb42f6824047c2e771268f20edf7a 355 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 312 1.0E-77 T 13-10-2018 IPR005262 Conserved hypothetical protein CHP00661 ambt_17465 f19cb42f6824047c2e771268f20edf7a 355 Pfam PF13528 Glycosyl transferase family 1 1 301 6.2E-38 T 13-10-2018 ambt_17465 f19cb42f6824047c2e771268f20edf7a 355 SUPERFAMILY SSF53756 10 277 2.47E-6 T 13-10-2018 ambt_21770 8b73268117f63b424c433215d0e072d6 513 SUPERFAMILY SSF55021 331 418 6.64E-27 T 13-10-2018 ambt_21770 8b73268117f63b424c433215d0e072d6 513 Gene3D G3DSA:3.40.50.1100 17 322 4.9E-126 T 13-10-2018 ambt_21770 8b73268117f63b424c433215d0e072d6 513 Gene3D G3DSA:3.40.1020.10 333 510 1.3E-67 T 13-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ambt_21770 8b73268117f63b424c433215d0e072d6 513 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 30 311 6.1E-75 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ambt_21770 8b73268117f63b424c433215d0e072d6 513 SUPERFAMILY SSF55021 415 508 6.18E-24 T 13-10-2018 ambt_21770 8b73268117f63b424c433215d0e072d6 513 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 9.2E-27 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ambt_21770 8b73268117f63b424c433215d0e072d6 513 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 426 508 1.2E-24 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ambt_21770 8b73268117f63b424c433215d0e072d6 513 Gene3D G3DSA:3.40.50.1100 53 152 4.9E-126 T 13-10-2018 ambt_21770 8b73268117f63b424c433215d0e072d6 513 SUPERFAMILY SSF53686 8 356 6.02E-97 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ambt_21770 8b73268117f63b424c433215d0e072d6 513 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 7 508 6.8E-225 T 13-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ambt_02340 34e3ced8ea05e806e50df70822493c39 424 SUPERFAMILY SSF111369 64 304 2.62E-62 T 13-10-2018 ambt_02340 34e3ced8ea05e806e50df70822493c39 424 Gene3D G3DSA:2.40.50.100 74 217 3.1E-91 T 13-10-2018 ambt_02340 34e3ced8ea05e806e50df70822493c39 424 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 380 2.4E-77 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_02340 34e3ced8ea05e806e50df70822493c39 424 Gene3D G3DSA:2.40.30.170 61 310 3.1E-91 T 13-10-2018 ambt_02340 34e3ced8ea05e806e50df70822493c39 424 Gene3D G3DSA:2.40.420.20 311 379 3.1E-91 T 13-10-2018 ambt_02340 34e3ced8ea05e806e50df70822493c39 424 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 299 1.4E-19 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_02340 34e3ced8ea05e806e50df70822493c39 424 Gene3D G3DSA:1.10.287.470 109 182 3.1E-91 T 13-10-2018 ambt_05885 064ffd85717e2e33c8ea80e9350206a9 376 SMART SM00631 112 354 1.6E-4 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_05885 064ffd85717e2e33c8ea80e9350206a9 376 Gene3D G3DSA:2.60.40.3120 1 112 9.2E-42 T 13-10-2018 ambt_05885 064ffd85717e2e33c8ea80e9350206a9 376 Gene3D G3DSA:3.40.630.10 113 376 6.4E-72 T 13-10-2018 ambt_05885 064ffd85717e2e33c8ea80e9350206a9 376 Pfam PF00246 Zinc carboxypeptidase 130 341 8.9E-25 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_05885 064ffd85717e2e33c8ea80e9350206a9 376 SUPERFAMILY SSF53187 105 372 3.84E-62 T 13-10-2018 ambt_09015 8a393b027fc698ac50730fd24185c88f 338 Pfam PF14253 Bacteriophage abortive infection AbiH 5 281 3.5E-50 T 13-10-2018 IPR025935 Bacteriophage abortive infection AbiH ambt_16375 58af8888dbec108c033c5a1d2137690d 408 Gene3D G3DSA:1.10.8.350 47 210 5.8E-89 T 13-10-2018 ambt_16375 58af8888dbec108c033c5a1d2137690d 408 SUPERFAMILY SSF53955 24 331 3.94E-100 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily ambt_16375 58af8888dbec108c033c5a1d2137690d 408 Gene3D G3DSA:1.10.101.10 344 407 6.9E-10 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ambt_16375 58af8888dbec108c033c5a1d2137690d 408 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 35 330 3.8E-111 T 13-10-2018 IPR011970 Lytic murein transglycosylase ambt_16375 58af8888dbec108c033c5a1d2137690d 408 Gene3D G3DSA:1.10.530.10 77 325 5.8E-89 T 13-10-2018 ambt_16375 58af8888dbec108c033c5a1d2137690d 408 SUPERFAMILY SSF47090 342 403 5.76E-13 T 13-10-2018 IPR036365 PGBD-like superfamily ambt_16375 58af8888dbec108c033c5a1d2137690d 408 Pfam PF13406 Transglycosylase SLT domain 36 326 1.3E-108 T 13-10-2018 IPR031304 Transglycosylase SLT domain 2 ambt_16375 58af8888dbec108c033c5a1d2137690d 408 Pfam PF01471 Putative peptidoglycan binding domain 346 400 1.1E-7 T 13-10-2018 IPR002477 Peptidoglycan binding-like ambt_04500 0dab389d54c3c5fd4ce502c1081b0169 263 ProSitePatterns PS00018 EF-hand calcium-binding domain. 60 72 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_04500 0dab389d54c3c5fd4ce502c1081b0169 263 Gene3D G3DSA:1.10.238.10 194 262 1.6E-9 T 13-10-2018 ambt_04500 0dab389d54c3c5fd4ce502c1081b0169 263 Gene3D G3DSA:1.10.238.10 16 82 2.2E-9 T 13-10-2018 ambt_04500 0dab389d54c3c5fd4ce502c1081b0169 263 Pfam PF13202 EF hand 30 46 9.9E-5 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 ambt_04500 0dab389d54c3c5fd4ce502c1081b0169 263 Pfam PF13202 EF hand 210 227 0.0056 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 ambt_04500 0dab389d54c3c5fd4ce502c1081b0169 263 SUPERFAMILY SSF47473 12 256 2.78E-14 T 13-10-2018 IPR011992 EF-hand domain pair ambt_04500 0dab389d54c3c5fd4ce502c1081b0169 263 ProSitePatterns PS00018 EF-hand calcium-binding domain. 35 47 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_15760 d1f79de63641968e2fe415449266b70d 459 PIRSF PIRSF016719 3 433 4.2E-94 T 13-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 ambt_15760 d1f79de63641968e2fe415449266b70d 459 Pfam PF07075 Protein of unknown function (DUF1343) 57 432 5.1E-114 T 13-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 ambt_15760 d1f79de63641968e2fe415449266b70d 459 Gene3D G3DSA:3.40.50.12170 34 434 2.6E-129 T 13-10-2018 ambt_10330 f0b9e6d740a31df3f485496a08219f9d 323 Gene3D G3DSA:3.90.245.10 5 311 5.0E-78 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like ambt_10330 f0b9e6d740a31df3f485496a08219f9d 323 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 6 301 7.2E-47 T 13-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ambt_10330 f0b9e6d740a31df3f485496a08219f9d 323 SUPERFAMILY SSF53590 4 310 1.31E-64 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like ambt_19725 b4f2ed56b3f3d6b23479dd2b9d71ce49 127 SUPERFAMILY SSF54593 1 127 2.69E-35 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_19725 b4f2ed56b3f3d6b23479dd2b9d71ce49 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 124 6.5E-20 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ambt_19725 b4f2ed56b3f3d6b23479dd2b9d71ce49 127 Gene3D G3DSA:3.10.180.10 7 126 2.4E-34 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_12185 daa377e90a3df63b89cdfd8747981cc1 101 SUPERFAMILY SSF52091 10 100 3.14E-18 T 13-10-2018 IPR036513 STAS domain superfamily ambt_12185 daa377e90a3df63b89cdfd8747981cc1 101 Gene3D G3DSA:3.30.750.24 4 101 1.7E-17 T 13-10-2018 IPR036513 STAS domain superfamily ambt_12185 daa377e90a3df63b89cdfd8747981cc1 101 Pfam PF13466 STAS domain 22 95 4.6E-10 T 13-10-2018 IPR002645 STAS domain ambt_17150 158c95fbfb072a19840a3d9124d9b4bf 305 Pfam PF04085 rod shape-determining protein MreC 125 269 6.2E-35 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 ambt_17150 158c95fbfb072a19840a3d9124d9b4bf 305 Gene3D G3DSA:2.40.10.350 180 257 2.7E-34 T 13-10-2018 ambt_17150 158c95fbfb072a19840a3d9124d9b4bf 305 Gene3D G3DSA:2.40.10.340 121 266 2.7E-34 T 13-10-2018 ambt_17150 158c95fbfb072a19840a3d9124d9b4bf 305 PIRSF PIRSF038471 2 284 9.9E-77 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 ambt_17150 158c95fbfb072a19840a3d9124d9b4bf 305 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 2 276 6.9E-72 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 ambt_14550 486033fd7a26837157db12393a293722 102 Gene3D G3DSA:3.30.750.24 2 102 1.4E-13 T 13-10-2018 IPR036513 STAS domain superfamily ambt_14550 486033fd7a26837157db12393a293722 102 Pfam PF13466 STAS domain 13 96 2.5E-13 T 13-10-2018 IPR002645 STAS domain ambt_14550 486033fd7a26837157db12393a293722 102 SUPERFAMILY SSF52091 4 101 2.16E-11 T 13-10-2018 IPR036513 STAS domain superfamily ambt_07660 3bb6ad8e7aaa1bb0559a278c6e3d58a2 497 Gene3D G3DSA:1.20.1250.20 10 220 2.9E-19 T 13-10-2018 ambt_07660 3bb6ad8e7aaa1bb0559a278c6e3d58a2 497 Gene3D G3DSA:1.20.1250.20 256 488 7.3E-16 T 13-10-2018 ambt_07660 3bb6ad8e7aaa1bb0559a278c6e3d58a2 497 ProSitePatterns PS00216 Sugar transport proteins signature 1. 340 356 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ambt_07660 3bb6ad8e7aaa1bb0559a278c6e3d58a2 497 Pfam PF07690 Major Facilitator Superfamily 307 488 9.4E-12 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_07660 3bb6ad8e7aaa1bb0559a278c6e3d58a2 497 Pfam PF07690 Major Facilitator Superfamily 17 288 3.2E-19 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_07660 3bb6ad8e7aaa1bb0559a278c6e3d58a2 497 SUPERFAMILY SSF103473 11 483 1.96E-40 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_04360 3e4cd3432d52c8a7873cabbeba63383c 220 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 4.2E-66 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_04360 3e4cd3432d52c8a7873cabbeba63383c 220 Pfam PF00677 Lumazine binding domain 100 184 1.9E-24 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_04360 3e4cd3432d52c8a7873cabbeba63383c 220 Pfam PF00677 Lumazine binding domain 3 87 5.1E-19 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_04360 3e4cd3432d52c8a7873cabbeba63383c 220 Gene3D G3DSA:2.40.30.20 102 202 5.8E-36 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_04360 3e4cd3432d52c8a7873cabbeba63383c 220 Gene3D G3DSA:2.40.30.20 1 89 4.4E-25 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ambt_04360 3e4cd3432d52c8a7873cabbeba63383c 220 SUPERFAMILY SSF63380 93 194 6.29E-34 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ambt_04360 3e4cd3432d52c8a7873cabbeba63383c 220 SUPERFAMILY SSF63380 1 93 9.35E-25 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ambt_04360 3e4cd3432d52c8a7873cabbeba63383c 220 PIRSF PIRSF000498 1 212 3.1E-78 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ambt_17875 3abe95d2a1ded120fd8f91662d6afd98 244 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 205 5.5E-32 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) ambt_17875 3abe95d2a1ded120fd8f91662d6afd98 244 Gene3D G3DSA:2.40.160.60 24 244 6.9E-62 T 13-10-2018 ambt_17875 3abe95d2a1ded120fd8f91662d6afd98 244 SUPERFAMILY SSF56935 26 236 3.84E-30 T 13-10-2018 ambt_18050 f9e6a09029e5b890127919b7af59154a 490 Gene3D G3DSA:1.20.1600.10 65 476 1.9E-128 T 13-10-2018 ambt_18050 f9e6a09029e5b890127919b7af59154a 490 Gene3D G3DSA:2.20.200.10 111 364 1.9E-128 T 13-10-2018 ambt_18050 f9e6a09029e5b890127919b7af59154a 490 SUPERFAMILY SSF56954 7 476 2.22E-102 T 13-10-2018 ambt_18050 f9e6a09029e5b890127919b7af59154a 490 Pfam PF02321 Outer membrane efflux protein 297 473 4.0E-27 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_18050 f9e6a09029e5b890127919b7af59154a 490 Pfam PF02321 Outer membrane efflux protein 74 264 2.3E-17 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_18050 f9e6a09029e5b890127919b7af59154a 490 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 475 3.7E-107 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 ambt_19905 0dea2162386afb664c7110c9d3a073e5 277 ProSitePatterns PS00893 Nudix box signature. 181 202 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ambt_19905 0dea2162386afb664c7110c9d3a073e5 277 SUPERFAMILY SSF55811 12 117 1.58E-7 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ambt_19905 0dea2162386afb664c7110c9d3a073e5 277 Gene3D G3DSA:3.90.79.20 4 146 3.3E-25 T 13-10-2018 ambt_19905 0dea2162386afb664c7110c9d3a073e5 277 SUPERFAMILY SSF55811 101 266 5.01E-41 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ambt_19905 0dea2162386afb664c7110c9d3a073e5 277 Gene3D G3DSA:3.90.79.10 147 276 5.7E-41 T 13-10-2018 ambt_19905 0dea2162386afb664c7110c9d3a073e5 277 Pfam PF00293 NUDIX domain 153 253 1.5E-19 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ambt_19905 0dea2162386afb664c7110c9d3a073e5 277 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 114 145 9.5E-8 T 13-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 Pfam PF10135 Rod binding protein 54 105 1.0E-16 T 13-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 Gene3D G3DSA:1.10.530.10 166 305 1.9E-43 T 13-10-2018 ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 16 309 2.9E-88 T 13-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 Gene3D G3DSA:2.10.70.40 200 252 1.9E-43 T 13-10-2018 ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 SMART SM00047 153 315 5.9E-27 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 172 308 2.3E-21 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 PRINTS PR01002 Flagellar protein FlgJ signature 185 203 1.7E-28 T 13-10-2018 ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 PRINTS PR01002 Flagellar protein FlgJ signature 205 226 1.7E-28 T 13-10-2018 ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 PRINTS PR01002 Flagellar protein FlgJ signature 292 310 1.7E-28 T 13-10-2018 ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 PRINTS PR01002 Flagellar protein FlgJ signature 32 55 1.7E-28 T 13-10-2018 ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 PRINTS PR01002 Flagellar protein FlgJ signature 227 248 1.7E-28 T 13-10-2018 ambt_13470 79abdb22bcb245676ba0a7b3bab2305d 316 PRINTS PR01002 Flagellar protein FlgJ signature 249 270 1.7E-28 T 13-10-2018 ambt_09870 22508b46c71867b015c5432b1f015c72 270 Pfam PF03618 Kinase/pyrophosphorylase 5 260 1.1E-76 T 13-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 ambt_09870 22508b46c71867b015c5432b1f015c72 270 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 1 269 76.476 T 13-10-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein ambt_20330 1b7462449c96e6407e8e1f4ef6495330 162 Pfam PF04542 Sigma-70 region 2 6 68 8.8E-9 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_20330 1b7462449c96e6407e8e1f4ef6495330 162 SUPERFAMILY SSF88659 95 155 6.17E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_20330 1b7462449c96e6407e8e1f4ef6495330 162 SUPERFAMILY SSF88946 5 76 5.1E-13 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_20330 1b7462449c96e6407e8e1f4ef6495330 162 Gene3D G3DSA:1.20.140.160 1 153 2.7E-34 T 13-10-2018 ambt_20330 1b7462449c96e6407e8e1f4ef6495330 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 154 3.6E-23 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_20330 1b7462449c96e6407e8e1f4ef6495330 162 Pfam PF08281 Sigma-70, region 4 99 150 2.4E-15 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_16420 1814019a0bb5a0eb2fc7ba9abdd3f816 695 SUPERFAMILY SSF56349 299 517 1.77E-6 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_16420 1814019a0bb5a0eb2fc7ba9abdd3f816 695 Gene3D G3DSA:1.10.443.10 292 523 6.7E-9 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_15860 6b001f5e18ed314198fd4cff000151cb 429 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 35 414 9.4E-108 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 ambt_15860 6b001f5e18ed314198fd4cff000151cb 429 PIRSF PIRSF005962 19 429 1.2E-118 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 ambt_15860 6b001f5e18ed314198fd4cff000151cb 429 Gene3D G3DSA:3.30.70.360 215 332 5.7E-133 T 13-10-2018 ambt_15860 6b001f5e18ed314198fd4cff000151cb 429 Pfam PF01546 Peptidase family M20/M25/M40 92 421 6.9E-31 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 ambt_15860 6b001f5e18ed314198fd4cff000151cb 429 SUPERFAMILY SSF55031 218 324 9.94E-30 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ambt_15860 6b001f5e18ed314198fd4cff000151cb 429 Gene3D G3DSA:3.40.630.10 34 409 5.7E-133 T 13-10-2018 ambt_15860 6b001f5e18ed314198fd4cff000151cb 429 SUPERFAMILY SSF53187 25 427 8.47E-84 T 13-10-2018 ambt_15860 6b001f5e18ed314198fd4cff000151cb 429 Pfam PF07687 Peptidase dimerisation domain 220 315 6.6E-11 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain ambt_15435 fc8bb36797af79621cc5f7012dc39bb2 445 SMART SM00388 223 299 2.8E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_15435 fc8bb36797af79621cc5f7012dc39bb2 445 SUPERFAMILY SSF47384 208 296 7.26E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_15435 fc8bb36797af79621cc5f7012dc39bb2 445 Gene3D G3DSA:1.10.287.130 167 292 4.9E-17 T 13-10-2018 ambt_15435 fc8bb36797af79621cc5f7012dc39bb2 445 SUPERFAMILY SSF55874 299 429 1.08E-8 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_15435 fc8bb36797af79621cc5f7012dc39bb2 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 225 296 2.4E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_15435 fc8bb36797af79621cc5f7012dc39bb2 445 Gene3D G3DSA:3.30.565.10 305 442 8.6E-9 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_08985 7e2867f2a062b6e6f2906c296c644e20 393 Pfam PF05762 VWA domain containing CoxE-like protein 186 273 1.2E-6 T 13-10-2018 IPR008912 Uncharacterised protein family CoxE-like ambt_11435 42a7257f476985b37baa1ece4fd8a77f 147 SUPERFAMILY SSF49764 8 140 5.23E-26 T 13-10-2018 IPR008978 HSP20-like chaperone ambt_11435 42a7257f476985b37baa1ece4fd8a77f 147 Pfam PF00011 Hsp20/alpha crystallin family 45 140 8.1E-22 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain ambt_11435 42a7257f476985b37baa1ece4fd8a77f 147 Gene3D G3DSA:2.60.40.790 34 141 1.9E-26 T 13-10-2018 IPR008978 HSP20-like chaperone ambt_03215 46caa7cbb6f4febe076ae50c91ac61c8 292 Pfam PF14240 YHYH protein 141 233 8.8E-11 T 13-10-2018 IPR025924 YHYH domain ambt_18585 0674385508a6eb141a15cf7d19be1626 591 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 67 519 2.4E-144 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ambt_18585 0674385508a6eb141a15cf7d19be1626 591 ProSitePatterns PS01303 BCCT family of transporters signature. 337 346 - T 13-10-2018 IPR018093 BCCT transporter, conserved site ambt_18585 0674385508a6eb141a15cf7d19be1626 591 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 29 519 2.1E-163 T 13-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 ambt_10345 585ea2bfd171a200ae33b1fd53b59616 439 Gene3D G3DSA:1.20.1250.20 221 428 3.4E-19 T 13-10-2018 ambt_10345 585ea2bfd171a200ae33b1fd53b59616 439 Pfam PF07690 Major Facilitator Superfamily 29 378 2.7E-41 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_10345 585ea2bfd171a200ae33b1fd53b59616 439 SUPERFAMILY SSF103473 13 425 3.92E-69 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_10345 585ea2bfd171a200ae33b1fd53b59616 439 Gene3D G3DSA:1.20.1250.20 14 213 1.8E-41 T 13-10-2018 ambt_12585 6f4f6f971c9b0f3a6833f923609c9a72 340 SUPERFAMILY SSF51695 28 334 2.41E-63 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ambt_12585 6f4f6f971c9b0f3a6833f923609c9a72 340 Gene3D G3DSA:3.20.20.190 28 334 4.9E-86 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ambt_12585 6f4f6f971c9b0f3a6833f923609c9a72 340 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 33 328 4.0E-48 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ambt_20525 d27bf8b378f67b29407e6ec1412b3e8d 176 SUPERFAMILY SSF82171 29 164 1.9E-11 T 13-10-2018 ambt_20525 d27bf8b378f67b29407e6ec1412b3e8d 176 Gene3D G3DSA:2.120.10.30 10 176 1.5E-13 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_16570 c3c8cf15318af2f49c787c671aab13b2 382 SUPERFAMILY SSF56796 5 381 1.96E-123 T 13-10-2018 ambt_16570 c3c8cf15318af2f49c787c671aab13b2 382 Gene3D G3DSA:3.40.50.1970 2 182 7.6E-52 T 13-10-2018 ambt_16570 c3c8cf15318af2f49c787c671aab13b2 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 374 7.2E-118 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ambt_16570 c3c8cf15318af2f49c787c671aab13b2 382 Gene3D G3DSA:1.20.1090.10 183 382 1.2E-69 T 13-10-2018 ambt_11575 0d4bb88aeff8f53bdd68e14fc45273ad 118 Gene3D G3DSA:3.30.1450.10 30 115 4.4E-25 T 13-10-2018 IPR037873 BamE-like ambt_11575 0d4bb88aeff8f53bdd68e14fc45273ad 118 Pfam PF04355 SmpA / OmlA family 31 101 9.0E-25 T 13-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 ambt_11575 0d4bb88aeff8f53bdd68e14fc45273ad 118 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 110 27.653 T 13-10-2018 IPR026592 Outer membrane protein assembly factor BamE ambt_11815 4744541aa17666ea58bf298df7186425 240 Pfam PF03575 Peptidase family S51 6 209 3.1E-60 T 13-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 ambt_11815 4744541aa17666ea58bf298df7186425 240 Gene3D G3DSA:3.40.50.880 3 226 9.0E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_11815 4744541aa17666ea58bf298df7186425 240 SUPERFAMILY SSF52317 5 223 1.1E-38 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_16890 a0f21c6662ed4faa2a7bbd772c43ceb3 76 Pfam PF10980 Protein of unknown function (DUF2787) 6 63 1.9E-11 T 13-10-2018 IPR021248 Protein of unknown function DUF2787 ambt_16890 a0f21c6662ed4faa2a7bbd772c43ceb3 76 Gene3D G3DSA:3.10.450.430 2 73 2.7E-11 T 13-10-2018 ambt_09165 47cc496b3d166ac2e333a4181fae4f6e 668 SMART SM00283 406 667 3.4E-50 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_09165 47cc496b3d166ac2e333a4181fae4f6e 668 Gene3D G3DSA:1.10.287.950 338 668 6.3E-62 T 13-10-2018 ambt_09165 47cc496b3d166ac2e333a4181fae4f6e 668 SUPERFAMILY SSF58104 359 668 4.05E-66 T 13-10-2018 ambt_09165 47cc496b3d166ac2e333a4181fae4f6e 668 SMART SM00304 339 391 9.9E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_09165 47cc496b3d166ac2e333a4181fae4f6e 668 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 631 6.1E-39 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_21515 74dcd2dd3c37c0e776d19b1e882a4ed4 381 Pfam PF05359 Domain of Unknown Function (DUF748) 136 273 1.4E-16 T 13-10-2018 IPR008023 Protein of unknown function DUF748 ambt_08880 1ab1f80f07d36a355245b43b6e3f9a44 117 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 2.0E-46 T 13-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 ambt_08880 1ab1f80f07d36a355245b43b6e3f9a44 117 Pfam PF03960 ArsC family 8 116 8.3E-17 T 13-10-2018 IPR006660 Arsenate reductase-like ambt_08880 1ab1f80f07d36a355245b43b6e3f9a44 117 Gene3D G3DSA:3.40.30.10 1 117 1.0E-46 T 13-10-2018 ambt_08880 1ab1f80f07d36a355245b43b6e3f9a44 117 SUPERFAMILY SSF52833 3 116 9.13E-33 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_11750 a8ec465377a8f5a87a4543dda2903c2f 312 Gene3D G3DSA:3.40.630.10 1 312 3.5E-108 T 13-10-2018 ambt_11750 a8ec465377a8f5a87a4543dda2903c2f 312 SUPERFAMILY SSF53187 54 307 1.09E-33 T 13-10-2018 ambt_11750 a8ec465377a8f5a87a4543dda2903c2f 312 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 88 187 5.6E-7 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 ambt_04405 b737fcb05910338b1a6c481a3f971699 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 212 1.1E-24 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ambt_04405 b737fcb05910338b1a6c481a3f971699 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 Pfam PF16187 Middle or third domain of peptidase_M16 366 642 5.5E-53 T 13-10-2018 IPR032632 Peptidase M16, middle/third domain ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 SUPERFAMILY SSF63411 9 218 1.93E-45 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 SUPERFAMILY SSF63411 234 467 2.69E-55 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 Pfam PF00675 Insulinase (Peptidase family M16) 20 149 3.3E-29 T 13-10-2018 IPR011765 Peptidase M16, N-terminal ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 SUPERFAMILY SSF63411 701 915 2.38E-38 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 41 64 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 SUPERFAMILY SSF63411 468 687 3.12E-41 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 Gene3D G3DSA:3.30.830.10 3 231 7.0E-67 T 13-10-2018 ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 Gene3D G3DSA:3.30.830.10 237 466 1.1E-52 T 13-10-2018 ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 Pfam PF05193 Peptidase M16 inactive domain 181 344 1.7E-13 T 13-10-2018 IPR007863 Peptidase M16, C-terminal ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 Pfam PF05193 Peptidase M16 inactive domain 647 787 2.6E-5 T 13-10-2018 IPR007863 Peptidase M16, C-terminal ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 Gene3D G3DSA:3.30.830.10 616 874 1.7E-90 T 13-10-2018 ambt_12335 98457e3c9745f5fa462d3ea23e0626dd 915 Gene3D G3DSA:3.30.830.10 468 847 1.7E-90 T 13-10-2018 ambt_16200 5726c4e5a9362562d398a35a3591c0b4 66 Pfam PF11174 Protein of unknown function (DUF2970) 9 63 4.1E-20 T 13-10-2018 IPR021344 Protein of unknown function DUF2970 ambt_05455 20785a9dd08922d31946b5f3f3e9b714 314 PRINTS PR00721 Stomatin signature 82 103 1.6E-28 T 13-10-2018 IPR001972 Stomatin family GO:0016020 ambt_05455 20785a9dd08922d31946b5f3f3e9b714 314 PRINTS PR00721 Stomatin signature 117 134 1.6E-28 T 13-10-2018 IPR001972 Stomatin family GO:0016020 ambt_05455 20785a9dd08922d31946b5f3f3e9b714 314 PRINTS PR00721 Stomatin signature 137 160 1.6E-28 T 13-10-2018 IPR001972 Stomatin family GO:0016020 ambt_05455 20785a9dd08922d31946b5f3f3e9b714 314 PRINTS PR00721 Stomatin signature 180 201 1.6E-28 T 13-10-2018 IPR001972 Stomatin family GO:0016020 ambt_05455 20785a9dd08922d31946b5f3f3e9b714 314 PRINTS PR00721 Stomatin signature 161 179 1.6E-28 T 13-10-2018 IPR001972 Stomatin family GO:0016020 ambt_05455 20785a9dd08922d31946b5f3f3e9b714 314 SMART SM00244 27 185 2.9E-65 T 13-10-2018 IPR001107 Band 7 domain ambt_05455 20785a9dd08922d31946b5f3f3e9b714 314 Pfam PF16200 C-terminal region of band_7 251 311 6.9E-16 T 13-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 ambt_05455 20785a9dd08922d31946b5f3f3e9b714 314 SUPERFAMILY SSF117892 58 192 1.2E-42 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily ambt_05455 20785a9dd08922d31946b5f3f3e9b714 314 Pfam PF01145 SPFH domain / Band 7 family 32 211 3.2E-31 T 13-10-2018 IPR001107 Band 7 domain ambt_05455 20785a9dd08922d31946b5f3f3e9b714 314 Gene3D G3DSA:3.30.479.30 55 187 1.0E-44 T 13-10-2018 ambt_12390 60525944091c6ccb23b20b8be537e802 593 Pfam PF13584 Oxygen tolerance 18 481 1.2E-103 T 13-10-2018 IPR025738 Aerotolerance-related protein BatD ambt_14705 d352fd17db82bef433102f8595b621e2 187 SUPERFAMILY SSF88659 102 186 2.83E-12 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_14705 d352fd17db82bef433102f8595b621e2 187 Gene3D G3DSA:1.10.10.10 125 187 2.3E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_14705 d352fd17db82bef433102f8595b621e2 187 Pfam PF08281 Sigma-70, region 4 130 180 1.0E-10 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_14705 d352fd17db82bef433102f8595b621e2 187 Pfam PF04542 Sigma-70 region 2 25 96 4.5E-8 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_14705 d352fd17db82bef433102f8595b621e2 187 SUPERFAMILY SSF88946 16 106 1.02E-10 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_14705 d352fd17db82bef433102f8595b621e2 187 Gene3D G3DSA:1.10.1740.10 7 96 6.1E-9 T 13-10-2018 ambt_14705 d352fd17db82bef433102f8595b621e2 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 184 4.7E-21 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_22170 97625816f9800b9fc91b0287d4823676 156 SUPERFAMILY SSF81573 63 121 3.14E-14 T 13-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily ambt_22170 97625816f9800b9fc91b0287d4823676 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.065 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ambt_22170 97625816f9800b9fc91b0287d4823676 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 4.0E-37 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ambt_22170 97625816f9800b9fc91b0287d4823676 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 1.7E-52 T 13-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 ambt_22170 97625816f9800b9fc91b0287d4823676 156 Gene3D G3DSA:1.20.5.620 62 122 5.8E-20 T 13-10-2018 ambt_15155 7184ef15ecefed59fb5f0576a1495f92 331 Gene3D G3DSA:3.40.1030.10 74 321 2.0E-44 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ambt_15155 7184ef15ecefed59fb5f0576a1495f92 331 Pfam PF00591 Glycosyl transferase family, a/b domain 133 257 6.0E-6 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ambt_15155 7184ef15ecefed59fb5f0576a1495f92 331 SUPERFAMILY SSF52418 79 321 1.83E-44 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ambt_15155 7184ef15ecefed59fb5f0576a1495f92 331 SUPERFAMILY SSF47648 10 72 3.27E-14 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ambt_15155 7184ef15ecefed59fb5f0576a1495f92 331 Gene3D G3DSA:1.20.970.10 3 72 2.6E-20 T 13-10-2018 ambt_15155 7184ef15ecefed59fb5f0576a1495f92 331 Pfam PF02885 Glycosyl transferase family, helical bundle domain 12 70 7.5E-13 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 ambt_14210 35e324e8956891af5ac3c9317f3e07c5 257 Gene3D G3DSA:2.30.30.240 147 233 2.5E-10 T 13-10-2018 ambt_14210 35e324e8956891af5ac3c9317f3e07c5 257 SUPERFAMILY SSF50346 145 244 1.12E-8 T 13-10-2018 IPR011033 PRC-barrel-like superfamily ambt_14210 35e324e8956891af5ac3c9317f3e07c5 257 Pfam PF05239 PRC-barrel domain 159 222 1.5E-4 T 13-10-2018 IPR027275 PRC-barrel domain ambt_04825 63a13e5823da31c771e42f98841b6cff 119 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 11 43 5.9E-7 T 13-10-2018 IPR008769 Poly granule associated ambt_21415 e4231e17c8b57dac7edf5c0c5be38f74 347 Gene3D G3DSA:1.10.40.60 117 239 7.8E-80 T 13-10-2018 IPR038072 GspK, central domain superfamily ambt_21415 e4231e17c8b57dac7edf5c0c5be38f74 347 SUPERFAMILY SSF54523 54 345 5.02E-28 T 13-10-2018 ambt_21415 e4231e17c8b57dac7edf5c0c5be38f74 347 Pfam PF03934 Type II secretion system (T2SS), protein K 48 333 1.5E-79 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 ambt_21415 e4231e17c8b57dac7edf5c0c5be38f74 347 SUPERFAMILY SSF158544 119 236 1.88E-26 T 13-10-2018 IPR038072 GspK, central domain superfamily ambt_21415 e4231e17c8b57dac7edf5c0c5be38f74 347 SUPERFAMILY SSF158544 240 306 3.66E-15 T 13-10-2018 IPR038072 GspK, central domain superfamily ambt_21415 e4231e17c8b57dac7edf5c0c5be38f74 347 PIRSF PIRSF002786 18 345 9.5E-73 T 13-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 ambt_21415 e4231e17c8b57dac7edf5c0c5be38f74 347 Gene3D G3DSA:1.10.40.60 240 305 7.8E-80 T 13-10-2018 IPR038072 GspK, central domain superfamily ambt_21415 e4231e17c8b57dac7edf5c0c5be38f74 347 Gene3D G3DSA:3.30.1300.30 60 328 7.8E-80 T 13-10-2018 ambt_15945 28abbe133a66e8a551f79cec60b83cae 528 SUPERFAMILY SSF48452 5 176 4.93E-23 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_15945 28abbe133a66e8a551f79cec60b83cae 528 Pfam PF13469 Sulfotransferase family 287 479 5.5E-42 T 13-10-2018 ambt_15945 28abbe133a66e8a551f79cec60b83cae 528 Pfam PF13181 Tetratricopeptide repeat 140 171 0.073 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15945 28abbe133a66e8a551f79cec60b83cae 528 Pfam PF13181 Tetratricopeptide repeat 39 66 0.025 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15945 28abbe133a66e8a551f79cec60b83cae 528 Gene3D G3DSA:3.40.50.300 273 528 2.4E-61 T 13-10-2018 ambt_15945 28abbe133a66e8a551f79cec60b83cae 528 Pfam PF13176 Tetratricopeptide repeat 112 137 0.016 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15945 28abbe133a66e8a551f79cec60b83cae 528 SMART SM00028 38 71 61.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15945 28abbe133a66e8a551f79cec60b83cae 528 SMART SM00028 139 172 0.12 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15945 28abbe133a66e8a551f79cec60b83cae 528 SMART SM00028 105 138 1.6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15945 28abbe133a66e8a551f79cec60b83cae 528 SUPERFAMILY SSF52540 285 527 1.47E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15945 28abbe133a66e8a551f79cec60b83cae 528 Gene3D G3DSA:1.25.40.10 2 104 6.7E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12380 eb5e7bc617dd34944aea889836299110 344 Pfam PF00092 von Willebrand factor type A domain 90 281 2.5E-24 T 13-10-2018 IPR002035 von Willebrand factor, type A ambt_12380 eb5e7bc617dd34944aea889836299110 344 Gene3D G3DSA:3.40.50.410 87 288 1.2E-52 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_12380 eb5e7bc617dd34944aea889836299110 344 SMART SM00327 87 288 3.5E-18 T 13-10-2018 IPR002035 von Willebrand factor, type A ambt_12380 eb5e7bc617dd34944aea889836299110 344 SUPERFAMILY SSF53300 84 265 9.49E-38 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_10250 cc5ac01990459d315518b04f8f467b20 511 Gene3D G3DSA:3.30.450.20 85 211 2.0E-36 T 13-10-2018 ambt_10250 cc5ac01990459d315518b04f8f467b20 511 SUPERFAMILY SSF55785 362 472 3.66E-14 T 13-10-2018 IPR035965 PAS domain superfamily ambt_10250 cc5ac01990459d315518b04f8f467b20 511 Pfam PF00989 PAS fold 354 461 3.0E-7 T 13-10-2018 IPR013767 PAS fold GO:0006355 ambt_10250 cc5ac01990459d315518b04f8f467b20 511 Gene3D G3DSA:3.30.450.20 353 479 1.4E-16 T 13-10-2018 ambt_10250 cc5ac01990459d315518b04f8f467b20 511 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 355 470 2.1E-8 T 13-10-2018 IPR000014 PAS domain ambt_10250 cc5ac01990459d315518b04f8f467b20 511 SUPERFAMILY SSF103190 29 207 7.85E-38 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ambt_04435 270a14908425357db6578664f4033f22 141 SUPERFAMILY SSF54427 11 127 1.33E-15 T 13-10-2018 IPR032710 NTF2-like domain superfamily ambt_04435 270a14908425357db6578664f4033f22 141 Pfam PF12680 SnoaL-like domain 18 111 1.2E-8 T 13-10-2018 IPR037401 SnoaL-like domain ambt_04435 270a14908425357db6578664f4033f22 141 Gene3D G3DSA:3.10.450.50 5 126 2.8E-14 T 13-10-2018 ambt_07845 fe6ac7ba3005bef6a527c9108366a487 331 SUPERFAMILY SSF52821 94 241 1.22E-30 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_07845 fe6ac7ba3005bef6a527c9108366a487 331 Gene3D G3DSA:3.30.70.100 1 96 2.1E-33 T 13-10-2018 ambt_07845 fe6ac7ba3005bef6a527c9108366a487 331 Gene3D G3DSA:3.40.250.10 97 249 5.4E-51 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_07845 fe6ac7ba3005bef6a527c9108366a487 331 Pfam PF00581 Rhodanese-like domain 119 210 5.7E-7 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_07845 fe6ac7ba3005bef6a527c9108366a487 331 SMART SM00450 113 214 2.3E-19 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_07845 fe6ac7ba3005bef6a527c9108366a487 331 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.023 T 13-10-2018 IPR020936 Uncharacterised protein family UPF0176 ambt_12905 69d49d7393ea7f5004833940f160da4c 792 Gene3D G3DSA:3.40.50.11040 9 176 2.1E-24 T 13-10-2018 ambt_12905 69d49d7393ea7f5004833940f160da4c 792 Pfam PF05127 Helicase 227 420 2.8E-38 T 13-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 ambt_12905 69d49d7393ea7f5004833940f160da4c 792 Pfam PF13718 GNAT acetyltransferase 2 485 598 1.2E-9 T 13-10-2018 IPR000182 GNAT domain ambt_12905 69d49d7393ea7f5004833940f160da4c 792 Pfam PF13718 GNAT acetyltransferase 2 603 652 2.8E-8 T 13-10-2018 IPR000182 GNAT domain ambt_12905 69d49d7393ea7f5004833940f160da4c 792 Pfam PF08351 Domain of unknown function (DUF1726) 65 147 3.8E-5 T 13-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 ambt_12905 69d49d7393ea7f5004833940f160da4c 792 SUPERFAMILY SSF52540 189 361 5.32E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12905 69d49d7393ea7f5004833940f160da4c 792 SUPERFAMILY SSF55729 484 635 4.53E-11 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_12905 69d49d7393ea7f5004833940f160da4c 792 Gene3D G3DSA:3.40.630.30 456 650 1.1E-51 T 13-10-2018 ambt_13915 9c42edb8f355272376d8faf7e0b57f4d 194 Gene3D G3DSA:2.40.50.140 30 141 3.0E-38 T 13-10-2018 ambt_13915 9c42edb8f355272376d8faf7e0b57f4d 194 Pfam PF03100 CcmE 4 135 8.0E-43 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 ambt_13915 9c42edb8f355272376d8faf7e0b57f4d 194 SUPERFAMILY SSF82093 30 141 4.32E-38 T 13-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 ambt_13915 9c42edb8f355272376d8faf7e0b57f4d 194 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 31.151 T 13-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 ambt_14895 9a4a85a1f6336579526c2244920a9ab4 455 Pfam PF01618 MotA/TolQ/ExbB proton channel family 321 441 3.8E-30 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ambt_14895 9a4a85a1f6336579526c2244920a9ab4 455 PIRSF PIRSF037714 1 455 3.6E-169 T 13-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein ambt_06705 2320592804deb66230e72e52c825cd3a 89 Pfam PF00312 Ribosomal protein S15 10 88 2.6E-36 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_06705 2320592804deb66230e72e52c825cd3a 89 Gene3D G3DSA:1.10.287.10 2 89 4.9E-35 T 13-10-2018 ambt_06705 2320592804deb66230e72e52c825cd3a 89 SUPERFAMILY SSF47060 3 89 3.83E-34 T 13-10-2018 IPR009068 S15/NS1, RNA-binding ambt_06705 2320592804deb66230e72e52c825cd3a 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 3.9E-38 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_06705 2320592804deb66230e72e52c825cd3a 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 3.0E-37 T 13-10-2018 ambt_06705 2320592804deb66230e72e52c825cd3a 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_06705 2320592804deb66230e72e52c825cd3a 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.452 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_06705 2320592804deb66230e72e52c825cd3a 89 SMART SM01387 8 88 4.6E-50 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19925 633f91d437666e5828a40af558a54b40 148 Gene3D G3DSA:2.60.120.460 7 142 2.7E-35 T 13-10-2018 IPR035917 YjbQ-like superfamily ambt_19925 633f91d437666e5828a40af558a54b40 148 Pfam PF01894 Uncharacterised protein family UPF0047 23 139 8.5E-34 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 ambt_19925 633f91d437666e5828a40af558a54b40 148 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 18 142 1.4E-39 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 ambt_19925 633f91d437666e5828a40af558a54b40 148 PIRSF PIRSF004681 3 143 2.4E-38 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 ambt_19925 633f91d437666e5828a40af558a54b40 148 SUPERFAMILY SSF111038 6 142 6.54E-42 T 13-10-2018 IPR035917 YjbQ-like superfamily ambt_04335 39ff8ea3cb6b411e89ef8fa7228f17de 555 Pfam PF00005 ABC transporter 340 473 3.7E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_04335 39ff8ea3cb6b411e89ef8fa7228f17de 555 Pfam PF12848 ABC transporter 230 303 9.6E-13 T 13-10-2018 IPR032781 ABC-transporter extension domain ambt_04335 39ff8ea3cb6b411e89ef8fa7228f17de 555 SUPERFAMILY SSF52540 305 527 2.9E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04335 39ff8ea3cb6b411e89ef8fa7228f17de 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_04335 39ff8ea3cb6b411e89ef8fa7228f17de 555 Pfam PF00005 ABC transporter 22 191 6.5E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_04335 39ff8ea3cb6b411e89ef8fa7228f17de 555 SUPERFAMILY SSF52540 13 243 9.35E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_04335 39ff8ea3cb6b411e89ef8fa7228f17de 555 SMART SM00382 31 236 1.8E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_04335 39ff8ea3cb6b411e89ef8fa7228f17de 555 SMART SM00382 348 521 3.7E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_04335 39ff8ea3cb6b411e89ef8fa7228f17de 555 Gene3D G3DSA:3.40.50.300 286 555 3.3E-76 T 13-10-2018 ambt_04335 39ff8ea3cb6b411e89ef8fa7228f17de 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 6.0E-291 T 13-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 ambt_04335 39ff8ea3cb6b411e89ef8fa7228f17de 555 Gene3D G3DSA:3.40.50.300 1 285 1.1E-85 T 13-10-2018 ambt_09660 d29f3b804216561aa8d7f5e17e86950c 106 SUPERFAMILY SSF54736 21 105 4.81E-35 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ambt_09660 d29f3b804216561aa8d7f5e17e86950c 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 10 101 28.759 T 13-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS ambt_09660 d29f3b804216561aa8d7f5e17e86950c 106 Gene3D G3DSA:3.30.1390.10 1 106 9.4E-46 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ambt_09660 d29f3b804216561aa8d7f5e17e86950c 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 5.9E-36 T 13-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 ambt_20475 71eee9789b005119df58c443970e6a9c 195 Gene3D G3DSA:2.40.50.870 33 195 8.8E-47 T 13-10-2018 ambt_20475 71eee9789b005119df58c443970e6a9c 195 Pfam PF11736 Protein of unknown function (DUF3299) 40 191 6.0E-49 T 13-10-2018 IPR021727 Protein of unknown function DUF3299 ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 456 3.2E-190 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 SUPERFAMILY SSF54631 95 203 4.3E-27 T 13-10-2018 ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 Pfam PF00571 CBS domain 95 140 1.6E-8 T 13-10-2018 IPR000644 CBS domain ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 Pfam PF00571 CBS domain 158 202 1.2E-5 T 13-10-2018 IPR000644 CBS domain ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 475 3.8E-160 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 PIRSF PIRSF000130 1 489 8.6E-200 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 488 82.735 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 SMART SM01240 7 475 0.0 T 13-10-2018 ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 SUPERFAMILY SSF51412 1 479 1.05E-127 T 13-10-2018 ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 Gene3D G3DSA:3.20.20.70 1 488 2.8E-207 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 SMART SM00116 158 206 2.2E-6 T 13-10-2018 IPR000644 CBS domain ambt_04005 a9490893420a31dc60a4e9a5b2b9732b 489 SMART SM00116 96 144 3.3E-7 T 13-10-2018 IPR000644 CBS domain ambt_17320 f58ada6a069a9bd7162c6dca8843bad4 305 SMART SM01130 1 303 1.5E-44 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_17320 f58ada6a069a9bd7162c6dca8843bad4 305 Pfam PF00701 Dihydrodipicolinate synthetase family 2 301 4.5E-27 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_17320 f58ada6a069a9bd7162c6dca8843bad4 305 Gene3D G3DSA:3.20.20.70 1 304 2.4E-68 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_17320 f58ada6a069a9bd7162c6dca8843bad4 305 PIRSF PIRSF001365 1 305 1.3E-44 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_17320 f58ada6a069a9bd7162c6dca8843bad4 305 SUPERFAMILY SSF51569 1 302 2.62E-52 T 13-10-2018 ambt_05090 088dd2718fb8f6c2023f0c993c211200 198 Pfam PF06930 Protein of unknown function (DUF1282) 9 179 1.3E-34 T 13-10-2018 IPR009698 Protein of unknown function DUF1282 ambt_13740 471d290885669169e5e3cbda3e54fe74 348 Pfam PF12069 Protein of unknown function (DUF3549) 4 343 2.5E-113 T 13-10-2018 IPR021936 Protein of unknown function DUF3549 ambt_10430 e4b4650b2fc0ac65f4c26afa15bf1635 841 Gene3D G3DSA:3.60.20.10 306 818 1.1E-89 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_10430 e4b4650b2fc0ac65f4c26afa15bf1635 841 Gene3D G3DSA:2.30.120.10 402 453 1.1E-89 T 13-10-2018 ambt_10430 e4b4650b2fc0ac65f4c26afa15bf1635 841 Gene3D G3DSA:1.10.1400.10 600 736 1.1E-89 T 13-10-2018 ambt_10430 e4b4650b2fc0ac65f4c26afa15bf1635 841 PIRSF PIRSF001227 6 229 2.0E-37 T 13-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 ambt_10430 e4b4650b2fc0ac65f4c26afa15bf1635 841 PIRSF PIRSF001227 241 829 3.3E-77 T 13-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 ambt_10430 e4b4650b2fc0ac65f4c26afa15bf1635 841 SUPERFAMILY SSF56235 44 828 1.0E-157 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_10430 e4b4650b2fc0ac65f4c26afa15bf1635 841 Pfam PF01804 Penicillin amidase 46 825 1.0E-119 T 13-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 ambt_10430 e4b4650b2fc0ac65f4c26afa15bf1635 841 Gene3D G3DSA:1.10.439.10 20 178 2.9E-40 T 13-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 ambt_18115 cb1bf1b8d3e76d53d48340035f7151f7 389 SMART SM00304 61 113 8.2E-5 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_18115 cb1bf1b8d3e76d53d48340035f7151f7 389 Gene3D G3DSA:1.10.287.950 60 388 1.3E-58 T 13-10-2018 ambt_18115 cb1bf1b8d3e76d53d48340035f7151f7 389 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 174 353 5.8E-33 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_18115 cb1bf1b8d3e76d53d48340035f7151f7 389 SMART SM00283 128 389 3.0E-44 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_18115 cb1bf1b8d3e76d53d48340035f7151f7 389 SUPERFAMILY SSF58104 81 387 1.83E-57 T 13-10-2018 ambt_18115 cb1bf1b8d3e76d53d48340035f7151f7 389 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 226 253 1.3E-19 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_18115 cb1bf1b8d3e76d53d48340035f7151f7 389 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 255 284 1.3E-19 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_18115 cb1bf1b8d3e76d53d48340035f7151f7 389 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 149 178 1.3E-19 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_09725 ab5dfc4c87aba5766c1d02febffee63e 94 Pfam PF06865 Protein of unknown function (DUF1255) 4 93 2.3E-34 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 ambt_09725 ab5dfc4c87aba5766c1d02febffee63e 94 Gene3D G3DSA:2.60.120.10 1 94 3.5E-33 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_09725 ab5dfc4c87aba5766c1d02febffee63e 94 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 2 94 23.486 T 13-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 ambt_09725 ab5dfc4c87aba5766c1d02febffee63e 94 SUPERFAMILY SSF51182 4 93 5.64E-33 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_20995 c8e25973553df77f9dd97da7d0e6996b 95 SUPERFAMILY SSF47413 25 94 1.31E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_20995 c8e25973553df77f9dd97da7d0e6996b 95 Gene3D G3DSA:1.10.260.40 10 95 5.9E-9 T 13-10-2018 ambt_20995 c8e25973553df77f9dd97da7d0e6996b 95 Pfam PF13744 Helix-turn-helix domain 14 94 4.1E-17 T 13-10-2018 IPR039554 HigA2-like, helix-turn-helix domain ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 149 168 7.4E-55 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 251 7.4E-55 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 29 45 7.4E-55 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 175 202 7.4E-55 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 205 231 7.4E-55 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 124 146 7.4E-55 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 86 104 7.4E-55 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 252 271 7.4E-55 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 67 85 7.4E-55 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 272 292 7.4E-55 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 46 64 7.4E-55 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 Gene3D G3DSA:3.30.1330.60 177 292 1.9E-34 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 SUPERFAMILY SSF103088 165 288 4.19E-29 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01021 OMPA domain signature 219 234 7.5E-5 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 PRINTS PR01021 OMPA domain signature 234 250 7.5E-5 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 Gene3D G3DSA:2.60.40.2540 24 176 4.7E-47 T 13-10-2018 ambt_12590 3bc331a2ef24d38e3a4c22ab8ccbf49d 292 Pfam PF00691 OmpA family 188 283 1.7E-19 T 13-10-2018 IPR006665 OmpA-like domain ambt_13395 efc45094a858f30b787fe8817af343d8 283 Pfam PF08241 Methyltransferase domain 60 150 3.9E-20 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ambt_13395 efc45094a858f30b787fe8817af343d8 283 SUPERFAMILY SSF53335 38 242 2.96E-29 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_13395 efc45094a858f30b787fe8817af343d8 283 Gene3D G3DSA:3.40.50.150 15 251 4.1E-29 T 13-10-2018 ambt_03565 edbb9118b5b7e21effd4468883220466 211 Gene3D G3DSA:3.10.560.10 116 208 1.0E-17 T 13-10-2018 ambt_03565 edbb9118b5b7e21effd4468883220466 211 Pfam PF02563 Polysaccharide biosynthesis/export protein 43 116 1.1E-19 T 13-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 ambt_03565 edbb9118b5b7e21effd4468883220466 211 Gene3D G3DSA:3.30.1950.10 52 115 4.5E-12 T 13-10-2018 ambt_03565 edbb9118b5b7e21effd4468883220466 211 Pfam PF10531 SLBB domain 126 176 2.1E-7 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ambt_03565 edbb9118b5b7e21effd4468883220466 211 TIGRFAM TIGR03027 pepcterm_export: putative polysaccharide export protein, PEP-CTERM sytem-associated 47 211 3.2E-67 T 13-10-2018 IPR017477 PEP-CTERM, putative polysaccharide export protein ambt_15330 1d28d11656b8c5d69d863de9800d2f87 588 Pfam PF03880 DbpA RNA binding domain 488 558 5.8E-23 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain ambt_15330 1d28d11656b8c5d69d863de9800d2f87 588 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 2 560 44.509 T 13-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 ambt_15330 1d28d11656b8c5d69d863de9800d2f87 588 Pfam PF00270 DEAD/DEAH box helicase 32 197 7.0E-51 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_15330 1d28d11656b8c5d69d863de9800d2f87 588 SMART SM00487 26 224 5.2E-64 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_15330 1d28d11656b8c5d69d863de9800d2f87 588 Pfam PF00271 Helicase conserved C-terminal domain 233 341 8.3E-29 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_15330 1d28d11656b8c5d69d863de9800d2f87 588 Gene3D G3DSA:3.30.70.330 487 560 2.5E-13 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ambt_15330 1d28d11656b8c5d69d863de9800d2f87 588 SUPERFAMILY SSF52540 75 362 6.0E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15330 1d28d11656b8c5d69d863de9800d2f87 588 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ambt_15330 1d28d11656b8c5d69d863de9800d2f87 588 Gene3D G3DSA:3.40.50.300 7 213 3.9E-77 T 13-10-2018 ambt_15330 1d28d11656b8c5d69d863de9800d2f87 588 SMART SM00490 260 341 7.4E-33 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_15330 1d28d11656b8c5d69d863de9800d2f87 588 Gene3D G3DSA:3.40.50.300 215 432 2.0E-49 T 13-10-2018 ambt_04960 f73fcec8c86b7a8046ee91220f23ec7e 289 Pfam PF00892 EamA-like transporter family 2 132 8.2E-13 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_04960 f73fcec8c86b7a8046ee91220f23ec7e 289 Pfam PF00892 EamA-like transporter family 144 286 6.1E-10 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_04960 f73fcec8c86b7a8046ee91220f23ec7e 289 SUPERFAMILY SSF103481 38 136 4.97E-12 T 13-10-2018 ambt_04960 f73fcec8c86b7a8046ee91220f23ec7e 289 SUPERFAMILY SSF103481 215 288 4.32E-7 T 13-10-2018 ambt_08070 8b8e5a3188d904338b66c4016e738fae 1612 PIRSF PIRSF036761 1 1611 0.0 T 13-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 ambt_08070 8b8e5a3188d904338b66c4016e738fae 1612 SUPERFAMILY SSF51735 948 1240 9.19E-29 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_08070 8b8e5a3188d904338b66c4016e738fae 1612 SUPERFAMILY SSF53223 757 944 8.73E-24 T 13-10-2018 ambt_08070 8b8e5a3188d904338b66c4016e738fae 1612 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1604 0.0 T 13-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 ambt_00940 c166e51e5e7fba5ef924c9e3ec001ec1 399 SUPERFAMILY SSF56935 26 399 1.95E-19 T 13-10-2018 ambt_21165 f4813742f0af26c2537f4d7911c90cdb 255 SMART SM00062 23 241 0.0022 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_21165 f4813742f0af26c2537f4d7911c90cdb 255 Gene3D G3DSA:3.40.190.10 102 202 6.1E-17 T 13-10-2018 ambt_21165 f4813742f0af26c2537f4d7911c90cdb 255 Gene3D G3DSA:3.40.190.10 31 236 6.1E-17 T 13-10-2018 ambt_21165 f4813742f0af26c2537f4d7911c90cdb 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 237 5.8E-17 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_21165 f4813742f0af26c2537f4d7911c90cdb 255 SUPERFAMILY SSF53850 19 236 4.0E-24 T 13-10-2018 ambt_16460 ea06b0624ab67b67d74147825292429b 655 Gene3D G3DSA:3.30.450.20 184 300 1.7E-21 T 13-10-2018 ambt_16460 ea06b0624ab67b67d74147825292429b 655 SMART SM00304 324 378 1.7E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ambt_16460 ea06b0624ab67b67d74147825292429b 655 Gene3D G3DSA:1.10.287.950 323 655 9.6E-69 T 13-10-2018 ambt_16460 ea06b0624ab67b67d74147825292429b 655 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 460 620 1.4E-37 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_16460 ea06b0624ab67b67d74147825292429b 655 SUPERFAMILY SSF58104 346 655 7.32E-71 T 13-10-2018 ambt_16460 ea06b0624ab67b67d74147825292429b 655 Pfam PF02743 Cache domain 64 286 3.1E-16 T 13-10-2018 IPR033479 Double Cache domain 1 ambt_16460 ea06b0624ab67b67d74147825292429b 655 SMART SM00283 393 654 6.0E-69 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_16460 ea06b0624ab67b67d74147825292429b 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 518 9.3E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_16460 ea06b0624ab67b67d74147825292429b 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 520 549 9.3E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_16460 ea06b0624ab67b67d74147825292429b 655 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 321 9.3E-20 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ambt_18105 f7b48f60f26bc103a9e34314fffcd177 80 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 1 80 1.0E-14 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ ambt_18105 f7b48f60f26bc103a9e34314fffcd177 80 Gene3D G3DSA:1.10.1220.10 1 80 1.1E-27 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 ambt_18105 f7b48f60f26bc103a9e34314fffcd177 80 Pfam PF04221 RelB antitoxin 1 70 2.0E-16 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ ambt_06845 146a8bf99b67417988a02ecaafa539ad 216 Gene3D G3DSA:1.20.120.1760 6 202 5.6E-27 T 13-10-2018 ambt_06845 146a8bf99b67417988a02ecaafa539ad 216 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 90 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ambt_06845 146a8bf99b67417988a02ecaafa539ad 216 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 90 4.1E-11 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ambt_11115 016bcd25961b3d47af854d79762964ac 364 Gene3D G3DSA:3.40.50.150 184 363 1.6E-48 T 13-10-2018 ambt_11115 016bcd25961b3d47af854d79762964ac 364 Pfam PF01728 FtsJ-like methyltransferase 207 287 4.8E-6 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 ambt_11115 016bcd25961b3d47af854d79762964ac 364 Gene3D G3DSA:3.30.2300.20 80 183 3.2E-31 T 13-10-2018 ambt_11115 016bcd25961b3d47af854d79762964ac 364 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 363 72.242 T 13-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 ambt_11115 016bcd25961b3d47af854d79762964ac 364 Gene3D G3DSA:3.30.70.2810 1 79 3.4E-19 T 13-10-2018 ambt_11115 016bcd25961b3d47af854d79762964ac 364 SUPERFAMILY SSF53335 193 291 2.34E-12 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_11115 016bcd25961b3d47af854d79762964ac 364 PIRSF PIRSF028774 1 364 5.2E-127 T 13-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 ambt_20725 084afa0f6f2832b38094de5a5ef98cfd 140 Pfam PF00589 Phage integrase family 2 115 8.0E-7 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_20725 084afa0f6f2832b38094de5a5ef98cfd 140 Gene3D G3DSA:1.10.443.10 1 135 3.8E-11 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_20725 084afa0f6f2832b38094de5a5ef98cfd 140 SUPERFAMILY SSF56349 2 123 1.5E-11 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_01755 2c712d26c42df8321211aa7f7124b3c3 109 SUPERFAMILY SSF103481 5 104 1.15E-15 T 13-10-2018 ambt_01755 2c712d26c42df8321211aa7f7124b3c3 109 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.1E-22 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 ambt_01755 2c712d26c42df8321211aa7f7124b3c3 109 Gene3D G3DSA:1.10.3730.20 1 107 1.5E-26 T 13-10-2018 ambt_22055 cf5392d408bfb8271fbb2788183d1a2d 96 Gene3D G3DSA:1.10.260.40 6 79 1.9E-7 T 13-10-2018 ambt_22055 cf5392d408bfb8271fbb2788183d1a2d 96 Pfam PF13560 Helix-turn-helix domain 16 76 8.0E-8 T 13-10-2018 ambt_22055 cf5392d408bfb8271fbb2788183d1a2d 96 SUPERFAMILY SSF47413 16 66 1.35E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_10585 107fe2a76e0f935947172bcbc53bac18 329 SUPERFAMILY SSF53756 79 243 6.59E-6 T 13-10-2018 ambt_10585 107fe2a76e0f935947172bcbc53bac18 329 Gene3D G3DSA:3.40.50.2000 146 288 6.5E-7 T 13-10-2018 ambt_06885 a449fc018348916417e9063814e29581 281 Gene3D G3DSA:2.60.120.10 31 276 2.9E-18 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_06885 a449fc018348916417e9063814e29581 281 SUPERFAMILY SSF51182 65 278 3.7E-15 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_06885 a449fc018348916417e9063814e29581 281 Pfam PF14499 Domain of unknown function (DUF4437) 38 280 4.8E-100 T 13-10-2018 IPR028013 Protein of unknown function DUF4437 ambt_21110 5b6315c0d513c43919549fb8ddc3aadc 46 SUPERFAMILY SSF52540 4 44 2.04E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_21110 5b6315c0d513c43919549fb8ddc3aadc 46 Gene3D G3DSA:3.40.50.300 1 45 1.8E-7 T 13-10-2018 ambt_21110 5b6315c0d513c43919549fb8ddc3aadc 46 Pfam PF00005 ABC transporter 7 39 1.5E-5 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_04015 7232d078855bd6da4bd2a05d4a018c6a 540 SMART SM00283 279 539 5.8E-54 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_04015 7232d078855bd6da4bd2a05d4a018c6a 540 Gene3D G3DSA:1.10.287.950 249 540 1.4E-53 T 13-10-2018 ambt_04015 7232d078855bd6da4bd2a05d4a018c6a 540 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 504 1.6E-40 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_04015 7232d078855bd6da4bd2a05d4a018c6a 540 SUPERFAMILY SSF58104 235 536 9.94E-58 T 13-10-2018 ambt_18455 3b7cdf39487179c2d0d77a7ace5acc1d 254 SUPERFAMILY SSF69572 4 253 8.24E-62 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ambt_18455 3b7cdf39487179c2d0d77a7ace5acc1d 254 Pfam PF00899 ThiF family 14 247 3.2E-43 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ambt_18455 3b7cdf39487179c2d0d77a7ace5acc1d 254 Gene3D G3DSA:3.40.50.720 6 254 1.8E-65 T 13-10-2018 ambt_11140 58fd966b0e64b6d8856bd3e7acfb8d47 284 Pfam PF00793 DAHP synthetase I family 14 273 1.7E-65 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ambt_11140 58fd966b0e64b6d8856bd3e7acfb8d47 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 15 276 49.294 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ambt_11140 58fd966b0e64b6d8856bd3e7acfb8d47 284 Gene3D G3DSA:3.20.20.70 2 282 8.2E-96 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_11140 58fd966b0e64b6d8856bd3e7acfb8d47 284 SUPERFAMILY SSF51569 5 277 9.16E-101 T 13-10-2018 ambt_11140 58fd966b0e64b6d8856bd3e7acfb8d47 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 20 274 5.7E-115 T 13-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ambt_01210 f696a4acdb0cc92cb25336bb69299641 142 Gene3D G3DSA:1.25.40.10 36 142 3.3E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_01210 f696a4acdb0cc92cb25336bb69299641 142 SUPERFAMILY SSF48452 47 142 6.64E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12385 b231bb1ff51e367c7e388355080f7b77 671 SMART SM00327 94 259 0.0026 T 13-10-2018 IPR002035 von Willebrand factor, type A ambt_12385 b231bb1ff51e367c7e388355080f7b77 671 SUPERFAMILY SSF53300 98 274 3.64E-17 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_12385 b231bb1ff51e367c7e388355080f7b77 671 SUPERFAMILY SSF48452 380 476 7.83E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12385 b231bb1ff51e367c7e388355080f7b77 671 SMART SM00028 428 461 1.6E-5 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12385 b231bb1ff51e367c7e388355080f7b77 671 Gene3D G3DSA:3.40.50.410 94 288 2.8E-31 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_12385 b231bb1ff51e367c7e388355080f7b77 671 Pfam PF07719 Tetratricopeptide repeat 429 460 3.1E-6 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 ambt_12385 b231bb1ff51e367c7e388355080f7b77 671 Pfam PF13519 von Willebrand factor type A domain 98 204 1.6E-13 T 13-10-2018 IPR002035 von Willebrand factor, type A ambt_12385 b231bb1ff51e367c7e388355080f7b77 671 Gene3D G3DSA:1.25.40.10 403 508 1.2E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04870 315b6e1515a0508be8be94f236bda70b 548 Gene3D G3DSA:1.10.1220.110 100 153 2.5E-183 T 13-10-2018 ambt_04870 315b6e1515a0508be8be94f236bda70b 548 Gene3D G3DSA:4.10.450.10 41 199 2.5E-183 T 13-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 ambt_04870 315b6e1515a0508be8be94f236bda70b 548 Gene3D G3DSA:3.50.50.60 8 537 2.5E-183 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_04870 315b6e1515a0508be8be94f236bda70b 548 SUPERFAMILY SSF51905 6 541 2.04E-85 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_04870 315b6e1515a0508be8be94f236bda70b 548 PIRSF PIRSF000137 1 546 1.0E-152 T 13-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ambt_04870 315b6e1515a0508be8be94f236bda70b 548 Gene3D G3DSA:3.30.410.40 154 478 2.5E-183 T 13-10-2018 ambt_04870 315b6e1515a0508be8be94f236bda70b 548 Pfam PF00732 GMC oxidoreductase 8 303 3.0E-89 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ambt_04870 315b6e1515a0508be8be94f236bda70b 548 Pfam PF05199 GMC oxidoreductase 395 533 5.9E-47 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 ambt_04870 315b6e1515a0508be8be94f236bda70b 548 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 262 276 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ambt_04870 315b6e1515a0508be8be94f236bda70b 548 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 85 108 - T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ambt_04870 315b6e1515a0508be8be94f236bda70b 548 SUPERFAMILY SSF54373 298 481 2.94E-55 T 13-10-2018 ambt_08855 3f643e79f6ba2d1f04e410fffb6984fe 156 SUPERFAMILY SSF52833 4 153 1.32E-46 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_08855 3f643e79f6ba2d1f04e410fffb6984fe 156 Pfam PF00578 AhpC/TSA family 7 134 8.3E-36 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ambt_08855 3f643e79f6ba2d1f04e410fffb6984fe 156 Gene3D G3DSA:3.40.30.10 3 155 3.4E-45 T 13-10-2018 ambt_08855 3f643e79f6ba2d1f04e410fffb6984fe 156 PIRSF PIRSF000239 1 142 8.9E-17 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ambt_17855 b965e855313de963a996c10b6b5e5a7d 218 Gene3D G3DSA:2.40.160.60 3 218 3.3E-58 T 13-10-2018 ambt_17855 b965e855313de963a996c10b6b5e5a7d 218 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 8 218 3.2E-35 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) ambt_17855 b965e855313de963a996c10b6b5e5a7d 218 SUPERFAMILY SSF56935 6 218 7.32E-35 T 13-10-2018 ambt_22035 1d31e56fdfd4a17d662663daae93a050 105 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 31 79 6.6E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_22035 1d31e56fdfd4a17d662663daae93a050 105 SUPERFAMILY SSF47413 17 80 3.07E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_01090 b7aa3641b965b08ec1503a984281cb28 413 Gene3D G3DSA:3.30.565.10 276 401 1.8E-23 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01090 b7aa3641b965b08ec1503a984281cb28 413 Pfam PF07730 Histidine kinase 208 271 8.9E-8 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ambt_01090 b7aa3641b965b08ec1503a984281cb28 413 SUPERFAMILY SSF55874 314 405 1.7E-13 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01090 b7aa3641b965b08ec1503a984281cb28 413 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 377 4.4E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_02235 e93d5076b0196f8723ef2e4584196147 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 45.311 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ambt_02235 e93d5076b0196f8723ef2e4584196147 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 5.5E-106 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ambt_02235 e93d5076b0196f8723ef2e4584196147 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 6.0E-126 T 13-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ambt_02235 e93d5076b0196f8723ef2e4584196147 303 SUPERFAMILY SSF54211 3 125 2.2E-41 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_02235 e93d5076b0196f8723ef2e4584196147 303 Gene3D G3DSA:3.30.230.20 1 128 1.4E-51 T 13-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ambt_02235 e93d5076b0196f8723ef2e4584196147 303 Gene3D G3DSA:3.30.1700.10 129 303 1.6E-65 T 13-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 ambt_02235 e93d5076b0196f8723ef2e4584196147 303 SUPERFAMILY SSF54211 134 278 1.67E-50 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_14440 078232b78528d01b84ff0ef34089ce64 956 Pfam PF00512 His Kinase A (phospho-acceptor) domain 574 639 2.2E-18 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 Pfam PF13426 PAS domain 458 553 6.7E-19 T 13-10-2018 IPR000014 PAS domain ambt_14440 078232b78528d01b84ff0ef34089ce64 956 SMART SM00086 513 554 1.5E-5 T 13-10-2018 IPR001610 PAC motif ambt_14440 078232b78528d01b84ff0ef34089ce64 956 Gene3D G3DSA:3.40.50.12740 824 955 1.2E-41 T 13-10-2018 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 SMART SM00387 686 802 7.4E-35 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_14440 078232b78528d01b84ff0ef34089ce64 956 PRINTS PR00344 Bacterial sensor protein C-terminal signature 727 741 8.6E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 PRINTS PR00344 Bacterial sensor protein C-terminal signature 762 780 8.6E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 PRINTS PR00344 Bacterial sensor protein C-terminal signature 786 799 8.6E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 Pfam PF00072 Response regulator receiver domain 827 941 3.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 Gene3D G3DSA:3.30.450.20 319 444 7.0E-6 T 13-10-2018 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 SUPERFAMILY SSF52172 823 947 2.85E-36 T 13-10-2018 IPR011006 CheY-like superfamily ambt_14440 078232b78528d01b84ff0ef34089ce64 956 SMART SM00448 825 941 6.3E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 SUPERFAMILY SSF47384 559 640 4.32E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 SUPERFAMILY SSF55785 447 554 6.46E-22 T 13-10-2018 IPR035965 PAS domain superfamily ambt_14440 078232b78528d01b84ff0ef34089ce64 956 Gene3D G3DSA:3.30.565.10 640 805 3.6E-47 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_14440 078232b78528d01b84ff0ef34089ce64 956 SMART SM00388 574 639 3.4E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 SUPERFAMILY SSF55874 628 798 1.01E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_14440 078232b78528d01b84ff0ef34089ce64 956 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 440 560 1.6E-16 T 13-10-2018 IPR000014 PAS domain ambt_14440 078232b78528d01b84ff0ef34089ce64 956 Gene3D G3DSA:3.30.450.20 445 563 7.5E-36 T 13-10-2018 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 Gene3D G3DSA:1.10.287.130 564 639 4.0E-23 T 13-10-2018 ambt_14440 078232b78528d01b84ff0ef34089ce64 956 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 686 800 1.7E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_05640 7f272834a82c521db1c08c6e5b7d9fba 405 Gene3D G3DSA:3.20.20.120 105 371 7.8E-162 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ambt_05640 7f272834a82c521db1c08c6e5b7d9fba 405 SUPERFAMILY SSF51604 98 389 6.42E-72 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ambt_05640 7f272834a82c521db1c08c6e5b7d9fba 405 Gene3D G3DSA:3.30.390.10 3 402 7.8E-162 T 13-10-2018 IPR029017 Enolase-like, N-terminal ambt_05640 7f272834a82c521db1c08c6e5b7d9fba 405 SMART SM00922 128 259 7.1E-11 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ambt_05640 7f272834a82c521db1c08c6e5b7d9fba 405 SUPERFAMILY SSF54826 2 112 2.8E-34 T 13-10-2018 ambt_05640 7f272834a82c521db1c08c6e5b7d9fba 405 Pfam PF13378 Enolase C-terminal domain-like 142 380 1.4E-40 T 13-10-2018 IPR029065 Enolase C-terminal domain-like ambt_05640 7f272834a82c521db1c08c6e5b7d9fba 405 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 ambt_05640 7f272834a82c521db1c08c6e5b7d9fba 405 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 16 110 5.5E-31 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ambt_04265 73494e41d21816c45d49777dfe256cde 400 Gene3D G3DSA:2.50.20.10 105 291 1.9E-47 T 13-10-2018 ambt_04265 73494e41d21816c45d49777dfe256cde 400 Pfam PF17188 MucB/RseB C-terminal domain 299 394 6.9E-23 T 13-10-2018 IPR033436 MucB/RseB, C-terminal ambt_04265 73494e41d21816c45d49777dfe256cde 400 Pfam PF03888 MucB/RseB N-terminal domain 107 290 6.8E-52 T 13-10-2018 IPR033434 MucB/RseB, N-terminal ambt_04265 73494e41d21816c45d49777dfe256cde 400 Gene3D G3DSA:3.30.200.100 300 399 3.1E-23 T 13-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily ambt_01250 398803f971ae2dee904c239a9b857f58 343 SUPERFAMILY SSF50331 236 329 1.45E-21 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ambt_01250 398803f971ae2dee904c239a9b857f58 343 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_01250 398803f971ae2dee904c239a9b857f58 343 Pfam PF00005 ABC transporter 20 161 3.8E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_01250 398803f971ae2dee904c239a9b857f58 343 SUPERFAMILY SSF52540 4 244 1.17E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_01250 398803f971ae2dee904c239a9b857f58 343 Gene3D G3DSA:3.40.50.300 3 221 3.3E-64 T 13-10-2018 ambt_01250 398803f971ae2dee904c239a9b857f58 343 Pfam PF08402 TOBE domain 255 322 1.4E-9 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 ambt_01250 398803f971ae2dee904c239a9b857f58 343 SMART SM00382 28 217 1.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_01250 398803f971ae2dee904c239a9b857f58 343 Gene3D G3DSA:2.40.50.940 222 253 2.1E-12 T 13-10-2018 ambt_12270 c844435f0f6221137e805ecae0d8ea39 322 SUPERFAMILY SSF111369 21 238 5.49E-33 T 13-10-2018 ambt_12270 c844435f0f6221137e805ecae0d8ea39 322 Gene3D G3DSA:2.40.50.100 33 161 6.7E-58 T 13-10-2018 ambt_12270 c844435f0f6221137e805ecae0d8ea39 322 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 232 2.8E-13 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_12270 c844435f0f6221137e805ecae0d8ea39 322 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 22 312 5.7E-56 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_12270 c844435f0f6221137e805ecae0d8ea39 322 Gene3D G3DSA:1.10.287.470 68 127 6.7E-58 T 13-10-2018 ambt_12270 c844435f0f6221137e805ecae0d8ea39 322 Gene3D G3DSA:2.40.420.20 244 310 6.7E-58 T 13-10-2018 ambt_12270 c844435f0f6221137e805ecae0d8ea39 322 Gene3D G3DSA:2.40.30.170 21 243 6.7E-58 T 13-10-2018 ambt_04395 b9194fbd790179e914a0ff71ac402f38 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site ambt_04395 b9194fbd790179e914a0ff71ac402f38 296 Pfam PF00348 Polyprenyl synthetase 31 268 1.6E-55 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 ambt_04395 b9194fbd790179e914a0ff71ac402f38 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site ambt_04395 b9194fbd790179e914a0ff71ac402f38 296 SUPERFAMILY SSF48576 1 275 1.36E-80 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily ambt_04395 b9194fbd790179e914a0ff71ac402f38 296 Gene3D G3DSA:1.10.600.10 2 296 1.7E-90 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily ambt_05550 787f78aa5d9b9dfc5eedabf11aeb51dc 646 SUPERFAMILY SSF51905 1 333 3.43E-6 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_05550 787f78aa5d9b9dfc5eedabf11aeb51dc 646 Pfam PF13454 FAD-NAD(P)-binding 8 162 1.4E-20 T 13-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain ambt_16565 15183eb154afa86e9be7af9f5cea70c0 248 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 142 5.3E-32 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ambt_16565 15183eb154afa86e9be7af9f5cea70c0 248 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 ambt_16565 15183eb154afa86e9be7af9f5cea70c0 248 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 45.525 T 13-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 ambt_16565 15183eb154afa86e9be7af9f5cea70c0 248 Gene3D G3DSA:3.40.50.1240 2 248 2.7E-91 T 13-10-2018 IPR029033 Histidine phosphatase superfamily ambt_16565 15183eb154afa86e9be7af9f5cea70c0 248 PIRSF PIRSF000709 3 112 1.2E-7 T 13-10-2018 ambt_16565 15183eb154afa86e9be7af9f5cea70c0 248 PIRSF PIRSF000709 146 242 0.38 T 13-10-2018 ambt_16565 15183eb154afa86e9be7af9f5cea70c0 248 SUPERFAMILY SSF53254 1 245 1.3E-80 T 13-10-2018 IPR029033 Histidine phosphatase superfamily ambt_16565 15183eb154afa86e9be7af9f5cea70c0 248 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 246 1.8E-119 T 13-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 ambt_16565 15183eb154afa86e9be7af9f5cea70c0 248 SMART SM00855 3 189 6.0E-28 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 Gene3D G3DSA:3.50.50.60 473 626 2.6E-115 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_02010 3dc6961920d77b02b49f8609965167b8 673 SUPERFAMILY SSF51905 472 628 3.1E-18 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_02010 3dc6961920d77b02b49f8609965167b8 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 653 3.7E-25 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 Gene3D G3DSA:3.20.20.70 4 371 1.1E-115 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 SUPERFAMILY SSF51395 3 364 2.88E-104 T 13-10-2018 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 1.6E-15 T 13-10-2018 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 379 398 1.6E-15 T 13-10-2018 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 501 519 1.6E-15 T 13-10-2018 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 461 479 1.6E-15 T 13-10-2018 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 Gene3D G3DSA:3.40.50.720 377 666 2.6E-115 T 13-10-2018 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 329 2.9E-74 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 SUPERFAMILY SSF51971 335 519 6.12E-40 T 13-10-2018 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 378 400 2.3E-6 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_02010 3dc6961920d77b02b49f8609965167b8 673 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 497 521 2.3E-6 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ambt_17670 94ad38603df65d7a9cf183c8fade43e2 434 SUPERFAMILY SSF53098 166 373 7.05E-8 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_17670 94ad38603df65d7a9cf183c8fade43e2 434 Pfam PF13701 Transposase DDE domain group 1 41 431 1.2E-37 T 13-10-2018 IPR025668 Transposase DDE domain ambt_07880 94ad38603df65d7a9cf183c8fade43e2 434 SUPERFAMILY SSF53098 166 373 7.05E-8 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_07880 94ad38603df65d7a9cf183c8fade43e2 434 Pfam PF13701 Transposase DDE domain group 1 41 431 1.2E-37 T 13-10-2018 IPR025668 Transposase DDE domain ambt_20160 4367158e726d55e2342d22ec4e29a3c9 796 Pfam PF00593 TonB dependent receptor 285 794 2.8E-39 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_20160 4367158e726d55e2342d22ec4e29a3c9 796 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 163 1.0E-16 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_20160 4367158e726d55e2342d22ec4e29a3c9 796 SUPERFAMILY SSF56935 34 796 4.03E-111 T 13-10-2018 ambt_00465 b51a1c11a602d365339ac75d3a092e6f 202 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 202 28.497 T 13-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 ambt_00465 b51a1c11a602d365339ac75d3a092e6f 202 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 201 2.0E-97 T 13-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 ambt_00465 b51a1c11a602d365339ac75d3a092e6f 202 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 200 4.4E-55 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 ambt_00465 b51a1c11a602d365339ac75d3a092e6f 202 PIRSF PIRSF006102 1 202 7.8E-60 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 ambt_22120 36628d8d307536eda41317ba3a0ae09b 112 Gene3D G3DSA:1.10.10.10 3 106 3.0E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_22120 36628d8d307536eda41317ba3a0ae09b 112 SUPERFAMILY SSF46767 6 86 1.44E-15 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ambt_22120 36628d8d307536eda41317ba3a0ae09b 112 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 6 85 2.3E-16 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ambt_12420 572979f82a9a724f957ba9026c0505d3 304 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 31 259 1.2E-60 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 ambt_12420 572979f82a9a724f957ba9026c0505d3 304 PIRSF PIRSF002936 2 304 9.4E-155 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ambt_12420 572979f82a9a724f957ba9026c0505d3 304 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 6 304 56.665 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ambt_12420 572979f82a9a724f957ba9026c0505d3 304 Gene3D G3DSA:3.40.50.620 9 213 1.2E-63 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_12420 572979f82a9a724f957ba9026c0505d3 304 SUPERFAMILY SSF52402 8 211 4.19E-71 T 13-10-2018 ambt_12420 572979f82a9a724f957ba9026c0505d3 304 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 11 304 1.1E-155 T 13-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ambt_15915 355ec05c0dbefa6108e5d9aa8d1f931e 79 Pfam PF02416 mttA/Hcf106 family 4 55 1.3E-14 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ambt_15915 355ec05c0dbefa6108e5d9aa8d1f931e 79 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 49 4.3E-20 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ambt_15915 355ec05c0dbefa6108e5d9aa8d1f931e 79 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 77 23.923 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ambt_12100 ac877d3600d6980b7973f790a1737b33 141 TIGRFAM TIGR02801 tolR: protein TolR 10 136 6.0E-46 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 ambt_12100 ac877d3600d6980b7973f790a1737b33 141 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 3 136 31.086 T 13-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 ambt_12100 ac877d3600d6980b7973f790a1737b33 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 7 137 8.8E-28 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ambt_12100 ac877d3600d6980b7973f790a1737b33 141 Gene3D G3DSA:3.30.420.270 56 128 1.1E-26 T 13-10-2018 ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 PRINTS PR00412 Epoxide hydrolase signature 140 153 3.7E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 PRINTS PR00412 Epoxide hydrolase signature 286 308 3.7E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 PRINTS PR00412 Epoxide hydrolase signature 126 139 3.7E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 PRINTS PR00412 Epoxide hydrolase signature 81 96 3.7E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 PRINTS PR00412 Epoxide hydrolase signature 252 268 3.7E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 81 96 7.7E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 126 139 7.7E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 254 268 7.7E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 140 153 7.7E-10 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 Gene3D G3DSA:3.40.50.1820 25 309 2.8E-53 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 SUPERFAMILY SSF53474 31 306 4.29E-53 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_20360 129512bb26cb5acef66c5f3c6ee147a6 318 Pfam PF00561 alpha/beta hydrolase fold 56 294 1.4E-26 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_13775 90359aff885ef84c61bb625a412dea11 238 Gene3D G3DSA:3.40.630.30 35 232 1.9E-18 T 13-10-2018 ambt_13775 90359aff885ef84c61bb625a412dea11 238 Pfam PF00583 Acetyltransferase (GNAT) family 79 185 1.5E-5 T 13-10-2018 IPR000182 GNAT domain ambt_13775 90359aff885ef84c61bb625a412dea11 238 SUPERFAMILY SSF55729 38 184 6.16E-13 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_04995 d6da6cc2af426a1459d41abbf0acc97b 376 PIRSF PIRSF016907 4 376 3.6E-124 T 13-10-2018 IPR011386 Putative ATP-NAD kinase ambt_04995 d6da6cc2af426a1459d41abbf0acc97b 376 SUPERFAMILY SSF111331 78 143 5.67E-6 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ambt_04995 d6da6cc2af426a1459d41abbf0acc97b 376 Pfam PF01513 ATP-NAD kinase 8 373 3.6E-42 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ambt_18235 b905890d9cad660e9fda3c81f5abe294 155 Pfam PF01152 Bacterial-like globin 40 149 8.1E-12 T 13-10-2018 IPR001486 Truncated hemoglobin GO:0019825 ambt_18235 b905890d9cad660e9fda3c81f5abe294 155 SUPERFAMILY SSF46458 40 150 1.01E-22 T 13-10-2018 IPR009050 Globin-like superfamily ambt_18235 b905890d9cad660e9fda3c81f5abe294 155 Gene3D G3DSA:1.10.490.10 30 154 7.4E-28 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ambt_15475 ea3e4b51effdea93f10564849f4798c5 96 Hamap MF_00599 Cell division protein FtsB [ftsB]. 5 93 34.194 T 13-10-2018 IPR023081 Cell division protein FtsB ambt_15475 ea3e4b51effdea93f10564849f4798c5 96 Pfam PF04977 Septum formation initiator 14 91 7.3E-26 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC ambt_15000 7594f1b6b9d5bf7b83ac250d1277ab57 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 7.0E-9 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15000 7594f1b6b9d5bf7b83ac250d1277ab57 71 Pfam PF01165 Ribosomal protein S21 4 56 1.3E-22 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15000 7594f1b6b9d5bf7b83ac250d1277ab57 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.396 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15000 7594f1b6b9d5bf7b83ac250d1277ab57 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 13-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_15000 7594f1b6b9d5bf7b83ac250d1277ab57 71 Gene3D G3DSA:1.20.5.1150 16 54 1.3E-20 T 13-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15000 7594f1b6b9d5bf7b83ac250d1277ab57 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.3E-24 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15000 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.1E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15000 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.1E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15000 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.1E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_15000 7594f1b6b9d5bf7b83ac250d1277ab57 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.1E-16 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_14590 04497d04208380c7f22e368fb947698e 192 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 16 188 1.3E-42 T 13-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related ambt_14590 04497d04208380c7f22e368fb947698e 192 Gene3D G3DSA:2.60.450.10 65 192 9.4E-42 T 13-10-2018 ambt_14590 04497d04208380c7f22e368fb947698e 192 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 7 191 25.134 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 ambt_14590 04497d04208380c7f22e368fb947698e 192 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 16 188 5.4E-47 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 ambt_14590 04497d04208380c7f22e368fb947698e 192 PIRSF PIRSF028513 6 192 6.1E-62 T 13-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 ambt_12085 31fcd918301cea56ce1173e354b71fdc 188 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 187 29.242 T 13-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 ambt_12085 31fcd918301cea56ce1173e354b71fdc 188 SUPERFAMILY SSF103088 83 187 3.66E-35 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_12085 31fcd918301cea56ce1173e354b71fdc 188 ProSitePatterns PS01068 OmpA-like domain. 119 163 - T 13-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 ambt_12085 31fcd918301cea56ce1173e354b71fdc 188 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 84 187 3.1E-42 T 13-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 ambt_12085 31fcd918301cea56ce1173e354b71fdc 188 PRINTS PR01021 OMPA domain signature 117 132 6.0E-21 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_12085 31fcd918301cea56ce1173e354b71fdc 188 PRINTS PR01021 OMPA domain signature 87 109 6.0E-21 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_12085 31fcd918301cea56ce1173e354b71fdc 188 PRINTS PR01021 OMPA domain signature 132 148 6.0E-21 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_12085 31fcd918301cea56ce1173e354b71fdc 188 Pfam PF00691 OmpA family 86 181 1.7E-23 T 13-10-2018 IPR006665 OmpA-like domain ambt_12085 31fcd918301cea56ce1173e354b71fdc 188 Gene3D G3DSA:3.30.1330.60 55 187 1.6E-42 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_08285 328f1f7c0586b541ec31431f86f8a2f7 337 Gene3D G3DSA:3.40.1090.10 92 214 9.5E-14 T 13-10-2018 ambt_08285 328f1f7c0586b541ec31431f86f8a2f7 337 Gene3D G3DSA:3.40.1090.10 1 91 2.6E-18 T 13-10-2018 ambt_08285 328f1f7c0586b541ec31431f86f8a2f7 337 SUPERFAMILY SSF52151 1 323 2.62E-48 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ambt_08285 328f1f7c0586b541ec31431f86f8a2f7 337 Pfam PF01734 Patatin-like phospholipase 124 162 2.1E-6 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ambt_08285 328f1f7c0586b541ec31431f86f8a2f7 337 Pfam PF01734 Patatin-like phospholipase 5 51 5.5E-8 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ambt_03775 8309424665aa4bcc5ee6676d88b866e1 351 Gene3D G3DSA:3.40.50.720 111 235 2.1E-10 T 13-10-2018 ambt_03775 8309424665aa4bcc5ee6676d88b866e1 351 Gene3D G3DSA:1.10.287.70 14 109 1.3E-14 T 13-10-2018 ambt_03775 8309424665aa4bcc5ee6676d88b866e1 351 Pfam PF07885 Ion channel 35 103 1.3E-12 T 13-10-2018 IPR013099 Potassium channel domain ambt_03775 8309424665aa4bcc5ee6676d88b866e1 351 SUPERFAMILY SSF51735 120 244 5.71E-8 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_03775 8309424665aa4bcc5ee6676d88b866e1 351 SUPERFAMILY SSF81324 21 132 5.76E-17 T 13-10-2018 ambt_07385 0a08da5a6874d714cace80bce357a845 85 Pfam PF01381 Helix-turn-helix 17 69 2.3E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_07385 0a08da5a6874d714cace80bce357a845 85 SMART SM00530 16 71 7.5E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_07385 0a08da5a6874d714cace80bce357a845 85 Gene3D G3DSA:1.10.260.40 1 80 7.6E-22 T 13-10-2018 ambt_07385 0a08da5a6874d714cace80bce357a845 85 SUPERFAMILY SSF47413 9 70 2.03E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_00190 a3b8a7834f59521b31b932917a039ea4 317 SUPERFAMILY SSF55681 72 266 1.07E-55 T 13-10-2018 ambt_00190 a3b8a7834f59521b31b932917a039ea4 317 Pfam PF02237 Biotin protein ligase C terminal domain 272 314 2.8E-6 T 13-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ambt_00190 a3b8a7834f59521b31b932917a039ea4 317 Gene3D G3DSA:1.10.10.10 1 52 2.9E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_00190 a3b8a7834f59521b31b932917a039ea4 317 SUPERFAMILY SSF50037 268 314 1.88E-9 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal ambt_00190 a3b8a7834f59521b31b932917a039ea4 317 Gene3D G3DSA:2.30.30.100 268 317 2.7E-16 T 13-10-2018 ambt_00190 a3b8a7834f59521b31b932917a039ea4 317 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 2 314 29.155 T 13-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 ambt_00190 a3b8a7834f59521b31b932917a039ea4 317 Pfam PF08279 HTH domain 5 49 1.9E-9 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 ambt_00190 a3b8a7834f59521b31b932917a039ea4 317 Pfam PF03099 Biotin/lipoate A/B protein ligase family 79 205 3.5E-19 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ambt_00190 a3b8a7834f59521b31b932917a039ea4 317 SUPERFAMILY SSF46785 1 50 7.97E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_00190 a3b8a7834f59521b31b932917a039ea4 317 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 74 314 1.6E-57 T 13-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ambt_00190 a3b8a7834f59521b31b932917a039ea4 317 Gene3D G3DSA:3.30.930.10 56 267 8.4E-60 T 13-10-2018 ambt_11535 7b655bd722f2b98d82a92662a0a1f539 764 SUPERFAMILY SSF56935 34 764 1.24E-110 T 13-10-2018 ambt_11535 7b655bd722f2b98d82a92662a0a1f539 764 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 165 5.0E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_11535 7b655bd722f2b98d82a92662a0a1f539 764 Gene3D G3DSA:2.40.170.20 48 764 3.1E-138 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_11535 7b655bd722f2b98d82a92662a0a1f539 764 Pfam PF00593 TonB dependent receptor 252 763 1.9E-39 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_21750 2f55398d6980162228730c019649da4c 208 SUPERFAMILY SSF46785 3 68 2.42E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_21750 2f55398d6980162228730c019649da4c 208 Pfam PF00717 Peptidase S24-like 120 186 1.1E-14 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ambt_21750 2f55398d6980162228730c019649da4c 208 Hamap MF_00015 LexA repressor [lexA]. 3 205 31.195 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ambt_21750 2f55398d6980162228730c019649da4c 208 Gene3D G3DSA:1.10.10.10 1 69 2.5E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_21750 2f55398d6980162228730c019649da4c 208 Gene3D G3DSA:2.10.109.10 86 208 6.1E-44 T 13-10-2018 ambt_21750 2f55398d6980162228730c019649da4c 208 SUPERFAMILY SSF51306 82 204 2.44E-35 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ambt_21750 2f55398d6980162228730c019649da4c 208 TIGRFAM TIGR00498 lexA: repressor LexA 1 205 4.1E-78 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ambt_21750 2f55398d6980162228730c019649da4c 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 156 168 4.4E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ambt_21750 2f55398d6980162228730c019649da4c 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 128 139 4.4E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ambt_21750 2f55398d6980162228730c019649da4c 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 117 127 4.4E-13 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ambt_21750 2f55398d6980162228730c019649da4c 208 Pfam PF01726 LexA DNA binding domain 1 65 7.4E-29 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 ambt_19150 a2361bde90e9f293a79a16615a2abd44 561 Gene3D G3DSA:2.60.40.380 31 131 6.2E-33 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 ambt_19150 a2361bde90e9f293a79a16615a2abd44 561 SUPERFAMILY SSF56300 134 542 1.01E-31 T 13-10-2018 ambt_19150 a2361bde90e9f293a79a16615a2abd44 561 Pfam PF09423 PhoD-like phosphatase 140 538 1.6E-116 T 13-10-2018 IPR018946 Alkaline phosphatase D-related ambt_19150 a2361bde90e9f293a79a16615a2abd44 561 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 40 129 7.8E-30 T 13-10-2018 IPR032093 Phospholipase D, N-terminal ambt_19150 a2361bde90e9f293a79a16615a2abd44 561 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 21 0.0015 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ambt_21095 3e14e16075839b33ffa7910b247e720d 583 SUPERFAMILY SSF56349 284 432 5.1E-8 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_04465 d6820423c075024a0a41d331cf093a04 244 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 29 241 7.8E-67 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase ambt_04465 d6820423c075024a0a41d331cf093a04 244 SUPERFAMILY SSF64438 2 243 3.3E-68 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic ambt_04465 d6820423c075024a0a41d331cf093a04 244 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 35 243 2.0E-56 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase ambt_04465 d6820423c075024a0a41d331cf093a04 244 Gene3D G3DSA:3.60.140.10 1 243 6.4E-76 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily ambt_05800 a2877c1667e6ce665c27495ffaccd73a 294 SUPERFAMILY SSF53167 40 268 4.06E-47 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ambt_05800 a2877c1667e6ce665c27495ffaccd73a 294 Gene3D G3DSA:3.40.50.1580 37 290 3.2E-73 T 13-10-2018 ambt_05800 a2877c1667e6ce665c27495ffaccd73a 294 Pfam PF01048 Phosphorylase superfamily 40 274 3.7E-34 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ambt_08535 0ca9a5ec5ef02af427bdad26261420ff 234 Gene3D G3DSA:3.40.50.150 8 232 5.3E-75 T 13-10-2018 ambt_08535 0ca9a5ec5ef02af427bdad26261420ff 234 Pfam PF13489 Methyltransferase domain 49 198 8.4E-26 T 13-10-2018 ambt_08535 0ca9a5ec5ef02af427bdad26261420ff 234 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 227 2.3E-83 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 ambt_08535 0ca9a5ec5ef02af427bdad26261420ff 234 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 8 233 36.806 T 13-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 ambt_08535 0ca9a5ec5ef02af427bdad26261420ff 234 SUPERFAMILY SSF53335 9 215 3.41E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_13200 0d7dd1a45acf2cdb70ad29b8853a21ef 127 SUPERFAMILY SSF52172 4 125 4.98E-38 T 13-10-2018 IPR011006 CheY-like superfamily ambt_13200 0d7dd1a45acf2cdb70ad29b8853a21ef 127 SMART SM00448 5 119 4.5E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_13200 0d7dd1a45acf2cdb70ad29b8853a21ef 127 Pfam PF00072 Response regulator receiver domain 7 119 1.2E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_13200 0d7dd1a45acf2cdb70ad29b8853a21ef 127 Gene3D G3DSA:3.40.50.2300 1 126 1.0E-40 T 13-10-2018 ambt_03595 fffe94ae7a769599198845c70f6a498c 417 Gene3D G3DSA:3.40.50.2000 160 361 4.8E-15 T 13-10-2018 ambt_03595 fffe94ae7a769599198845c70f6a498c 417 Gene3D G3DSA:3.40.50.2000 119 370 4.8E-15 T 13-10-2018 ambt_03595 fffe94ae7a769599198845c70f6a498c 417 SUPERFAMILY SSF53756 108 375 1.15E-15 T 13-10-2018 ambt_03595 fffe94ae7a769599198845c70f6a498c 417 Pfam PF13692 Glycosyl transferases group 1 177 318 5.2E-9 T 13-10-2018 ambt_19960 82516187ee4b023d1403389d1144d3f9 213 Gene3D G3DSA:2.40.33.20 3 213 1.6E-56 T 13-10-2018 ambt_19960 82516187ee4b023d1403389d1144d3f9 213 SUPERFAMILY SSF50800 5 212 9.94E-49 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily ambt_19960 82516187ee4b023d1403389d1144d3f9 213 Pfam PF03473 MOSC domain 50 162 1.2E-19 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 ambt_22000 caff29cd0f83d4e4f07f1b05ac2efbc7 512 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 291 297 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ambt_22000 caff29cd0f83d4e4f07f1b05ac2efbc7 512 SUPERFAMILY SSF53335 5 508 1.99E-102 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_22000 caff29cd0f83d4e4f07f1b05ac2efbc7 512 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 288 300 2.3E-15 T 13-10-2018 ambt_22000 caff29cd0f83d4e4f07f1b05ac2efbc7 512 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 206 220 2.3E-15 T 13-10-2018 ambt_22000 caff29cd0f83d4e4f07f1b05ac2efbc7 512 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 182 198 2.3E-15 T 13-10-2018 ambt_22000 caff29cd0f83d4e4f07f1b05ac2efbc7 512 Gene3D G3DSA:3.40.50.150 156 480 3.5E-97 T 13-10-2018 ambt_22000 caff29cd0f83d4e4f07f1b05ac2efbc7 512 Gene3D G3DSA:1.20.1260.30 1 155 5.2E-62 T 13-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily ambt_22000 caff29cd0f83d4e4f07f1b05ac2efbc7 512 Pfam PF02384 N-6 DNA Methylase 160 454 8.3E-63 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ambt_22000 caff29cd0f83d4e4f07f1b05ac2efbc7 512 Pfam PF12161 HsdM N-terminal domain 9 149 5.1E-15 T 13-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain ambt_21450 c64b6980821457b88f699da9b230ee86 235 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 187 2.8E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_21450 c64b6980821457b88f699da9b230ee86 235 SUPERFAMILY SSF56784 5 213 6.27E-42 T 13-10-2018 IPR036412 HAD-like superfamily ambt_21450 c64b6980821457b88f699da9b230ee86 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 189 3.0E-12 T 13-10-2018 ambt_21450 c64b6980821457b88f699da9b230ee86 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 180 193 5.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_21450 c64b6980821457b88f699da9b230ee86 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 5.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_21450 c64b6980821457b88f699da9b230ee86 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 5.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_21450 c64b6980821457b88f699da9b230ee86 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 5.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_21450 c64b6980821457b88f699da9b230ee86 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 5.3E-8 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_21450 c64b6980821457b88f699da9b230ee86 235 Gene3D G3DSA:3.40.50.1000 8 201 5.6E-24 T 13-10-2018 IPR023214 HAD superfamily ambt_01560 f1c8a24ad51bda85f7e89ba5d499e312 269 Gene3D G3DSA:3.40.50.300 1 258 9.4E-71 T 13-10-2018 ambt_01560 f1c8a24ad51bda85f7e89ba5d499e312 269 SUPERFAMILY SSF52540 1 267 2.89E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_01560 f1c8a24ad51bda85f7e89ba5d499e312 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 265 1.5E-112 T 13-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 ambt_01560 f1c8a24ad51bda85f7e89ba5d499e312 269 Pfam PF13614 AAA domain 3 157 9.2E-22 T 13-10-2018 IPR025669 AAA domain ambt_01560 f1c8a24ad51bda85f7e89ba5d499e312 269 PIRSF PIRSF003092 1 269 3.2E-94 T 13-10-2018 IPR025501 ATP binding protein MinD ambt_21425 6af65f64b4115ed15b9110551ca235ee 159 Gene3D G3DSA:3.30.1360.100 82 159 1.1E-23 T 13-10-2018 ambt_21425 6af65f64b4115ed15b9110551ca235ee 159 SUPERFAMILY SSF103054 82 157 9.55E-22 T 13-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily ambt_21425 6af65f64b4115ed15b9110551ca235ee 159 PIRSF PIRSF006291 1 159 2.1E-42 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 ambt_21425 6af65f64b4115ed15b9110551ca235ee 159 Pfam PF04612 Type II secretion system (T2SS), protein M 4 157 1.3E-43 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 ambt_13290 413645c1e104043a0f47b0eb9fad6596 564 PIRSF PIRSF004862 22 564 2.6E-124 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ambt_13290 413645c1e104043a0f47b0eb9fad6596 564 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 35 563 3.7E-74 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ambt_13290 413645c1e104043a0f47b0eb9fad6596 564 Gene3D G3DSA:3.30.300.30 136 235 4.4E-7 T 13-10-2018 ambt_13290 413645c1e104043a0f47b0eb9fad6596 564 PRINTS PR01009 Flagellar M-ring protein signature 135 153 4.8E-23 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ambt_13290 413645c1e104043a0f47b0eb9fad6596 564 PRINTS PR01009 Flagellar M-ring protein signature 358 382 4.8E-23 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ambt_13290 413645c1e104043a0f47b0eb9fad6596 564 PRINTS PR01009 Flagellar M-ring protein signature 210 228 4.8E-23 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ambt_13290 413645c1e104043a0f47b0eb9fad6596 564 PRINTS PR01009 Flagellar M-ring protein signature 167 181 4.8E-23 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ambt_13290 413645c1e104043a0f47b0eb9fad6596 564 PRINTS PR01009 Flagellar M-ring protein signature 280 298 4.8E-23 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ambt_13290 413645c1e104043a0f47b0eb9fad6596 564 Pfam PF08345 Flagellar M-ring protein C-terminal 267 434 1.3E-42 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal ambt_13290 413645c1e104043a0f47b0eb9fad6596 564 Pfam PF01514 Secretory protein of YscJ/FliF family 47 234 1.2E-49 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF ambt_13535 2ee0bc86b7d8e1d5c1c0bda5cdf98795 121 SUPERFAMILY SSF140566 1 92 4.05E-11 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 ambt_13535 2ee0bc86b7d8e1d5c1c0bda5cdf98795 121 Pfam PF05130 FlgN protein 2 110 1.4E-12 T 13-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 ambt_06050 ad2d909b0157a484033fdefd8ac3ac6b 217 Pfam PF08761 dUTPase 7 171 7.5E-28 T 13-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 ambt_06050 ad2d909b0157a484033fdefd8ac3ac6b 217 Gene3D G3DSA:1.10.4010.10 1 217 4.8E-69 T 13-10-2018 ambt_06050 ad2d909b0157a484033fdefd8ac3ac6b 217 SUPERFAMILY SSF101386 1 216 5.67E-61 T 13-10-2018 ambt_14870 8799f6ac126a7f28389a0f28856f3f3c 193 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 56 190 6.1E-31 T 13-10-2018 IPR018550 Lipid A 3-O-deacylase-related ambt_14870 8799f6ac126a7f28389a0f28856f3f3c 193 PIRSF PIRSF029681 1 193 1.8E-47 T 13-10-2018 IPR018550 Lipid A 3-O-deacylase-related ambt_14870 8799f6ac126a7f28389a0f28856f3f3c 193 Gene3D G3DSA:2.40.160.20 48 193 3.2E-36 T 13-10-2018 ambt_19380 91dae38986bb9319089686148546c03b 108 Gene3D G3DSA:1.10.140.10 2 105 1.8E-53 T 13-10-2018 IPR023453 Methionine repressor MetJ domain superfamily ambt_19380 91dae38986bb9319089686148546c03b 108 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 11 99 1.0E-40 T 13-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 ambt_19380 91dae38986bb9319089686148546c03b 108 SUPERFAMILY SSF47598 2 101 4.45E-55 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 ambt_19380 91dae38986bb9319089686148546c03b 108 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.7E-58 T 13-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 ambt_08240 29c331b6a7434ceebf49e7dd27bfc42c 53 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 3 45 1.3E-14 T 13-10-2018 IPR008621 Cbb3-type cytochrome oxidase component ambt_07725 b2746a4967d3e204a7a4661a349e79ab 253 Gene3D G3DSA:3.40.50.150 11 253 3.7E-49 T 13-10-2018 ambt_07725 b2746a4967d3e204a7a4661a349e79ab 253 SUPERFAMILY SSF53335 1 253 7.21E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_07725 b2746a4967d3e204a7a4661a349e79ab 253 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 5 253 37.165 T 13-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 ambt_07725 b2746a4967d3e204a7a4661a349e79ab 253 Pfam PF13489 Methyltransferase domain 33 166 4.6E-11 T 13-10-2018 ambt_16455 053519ffb3f0c950032e715d0170dc45 735 Gene3D G3DSA:1.10.1370.10 189 652 1.9E-206 T 13-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ambt_16455 053519ffb3f0c950032e715d0170dc45 735 Pfam PF01432 Peptidase family M3 271 720 6.4E-103 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 ambt_16455 053519ffb3f0c950032e715d0170dc45 735 SUPERFAMILY SSF55486 56 721 1.19E-171 T 13-10-2018 ambt_16455 053519ffb3f0c950032e715d0170dc45 735 Gene3D G3DSA:1.10.1370.40 63 719 1.9E-206 T 13-10-2018 ambt_16790 18980c00d9c53cabcb3fec6498c5bd14 425 SUPERFAMILY SSF56349 86 381 1.91E-31 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_16790 18980c00d9c53cabcb3fec6498c5bd14 425 Pfam PF00589 Phage integrase family 212 374 1.2E-9 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_16790 18980c00d9c53cabcb3fec6498c5bd14 425 Gene3D G3DSA:1.10.443.10 185 386 1.5E-24 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_16790 18980c00d9c53cabcb3fec6498c5bd14 425 Gene3D G3DSA:1.10.150.130 69 184 5.0E-5 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_04560 bc85749e1a08866ac44f4ca4c3252eb1 588 SUPERFAMILY SSF48317 8 580 1.23E-83 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ambt_04560 bc85749e1a08866ac44f4ca4c3252eb1 588 Gene3D G3DSA:1.10.606.10 1 588 2.7E-191 T 13-10-2018 IPR016119 Bromoperoxidase/chloroperoxidase C-terminal GO:0004601|GO:0055114 ambt_13370 814defae0e5f3f436906903142a59f8c 299 Pfam PF13578 Methyltransferase domain 144 253 8.8E-12 T 13-10-2018 ambt_13370 814defae0e5f3f436906903142a59f8c 299 Gene3D G3DSA:3.40.50.150 127 294 1.6E-13 T 13-10-2018 ambt_13370 814defae0e5f3f436906903142a59f8c 299 SUPERFAMILY SSF53335 200 277 2.71E-7 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_16760 6ac5b319495d2d34b8850951dd159ac7 245 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 178 240 3.1E-13 T 13-10-2018 IPR018660 C-type lysozyme inhibitor ambt_16760 6ac5b319495d2d34b8850951dd159ac7 245 Pfam PF03724 META domain 45 153 1.1E-20 T 13-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ ambt_16760 6ac5b319495d2d34b8850951dd159ac7 245 SUPERFAMILY SSF141488 173 243 7.06E-16 T 13-10-2018 IPR036328 C-type lysozyme inhibitor superfamily ambt_16760 6ac5b319495d2d34b8850951dd159ac7 245 Gene3D G3DSA:2.40.128.200 172 245 3.8E-15 T 13-10-2018 IPR036328 C-type lysozyme inhibitor superfamily ambt_16760 6ac5b319495d2d34b8850951dd159ac7 245 Gene3D G3DSA:2.40.128.270 35 158 2.2E-15 T 13-10-2018 IPR038670 HslJ-like superfamily ambt_05820 99ba263df31528d605a86be83290f19a 230 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 227 1.4E-56 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 ambt_05820 99ba263df31528d605a86be83290f19a 230 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 12 224 9.7E-56 T 13-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 ambt_05820 99ba263df31528d605a86be83290f19a 230 SUPERFAMILY SSF100950 5 227 1.61E-54 T 13-10-2018 IPR037171 NagB/RpiA transferase-like ambt_05820 99ba263df31528d605a86be83290f19a 230 Gene3D G3DSA:3.40.50.1360 2 230 1.2E-69 T 13-10-2018 ambt_06680 c35a3d4dd202d99ea1cb865c33f57ee6 152 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.699 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 ambt_06680 c35a3d4dd202d99ea1cb865c33f57ee6 152 SUPERFAMILY SSF74942 84 151 1.7E-16 T 13-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily ambt_06680 c35a3d4dd202d99ea1cb865c33f57ee6 152 SUPERFAMILY SSF75420 3 83 4.05E-27 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily ambt_06680 c35a3d4dd202d99ea1cb865c33f57ee6 152 Gene3D G3DSA:3.30.300.70 1 80 1.8E-28 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily ambt_06680 c35a3d4dd202d99ea1cb865c33f57ee6 152 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.2E-15 T 13-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal ambt_06680 c35a3d4dd202d99ea1cb865c33f57ee6 152 Pfam PF02576 RimP N-terminal domain 12 83 1.1E-30 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 Gene3D G3DSA:3.40.50.720 2 249 3.9E-47 T 13-10-2018 ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.5E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.5E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.5E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 SUPERFAMILY SSF51735 4 236 2.62E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.7E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.7E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.7E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.7E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.7E-21 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 Pfam PF00106 short chain dehydrogenase 6 198 5.2E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04120 a24680ab8ad42604efe39b120febe7ad 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_02255 0b4be1bac0db60d0de88c3bfa3a9f004 292 PIRSF PIRSF018001 1 292 5.2E-73 T 13-10-2018 IPR016708 Aspartoacylase GO:0016811 ambt_02255 0b4be1bac0db60d0de88c3bfa3a9f004 292 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 3 284 5.1E-44 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 ambt_02255 0b4be1bac0db60d0de88c3bfa3a9f004 292 Gene3D G3DSA:3.40.630.10 4 288 6.0E-104 T 13-10-2018 ambt_02255 0b4be1bac0db60d0de88c3bfa3a9f004 292 Hamap MF_00704 Probable aspartoacylase. 1 292 28.665 T 13-10-2018 IPR016708 Aspartoacylase GO:0016811 ambt_02255 0b4be1bac0db60d0de88c3bfa3a9f004 292 SUPERFAMILY SSF53187 3 288 6.28E-66 T 13-10-2018 ambt_02255 0b4be1bac0db60d0de88c3bfa3a9f004 292 Gene3D G3DSA:2.20.25.160 219 266 6.0E-104 T 13-10-2018 ambt_21730 b39afd30c83f66e391287be139cf6329 292 SUPERFAMILY SSF81452 3 292 2.83E-77 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21730 b39afd30c83f66e391287be139cf6329 292 Pfam PF00510 Cytochrome c oxidase subunit III 8 291 1.1E-49 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21730 b39afd30c83f66e391287be139cf6329 292 Gene3D G3DSA:1.20.120.80 77 292 1.9E-63 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21730 b39afd30c83f66e391287be139cf6329 292 Gene3D G3DSA:1.10.287.70 1 76 3.7E-17 T 13-10-2018 ambt_06650 95ec998f39afbfc9342147b2e343128c 60 Pfam PF08085 Entericidin EcnA/B family 36 55 7.1E-9 T 13-10-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 ambt_13695 416e9ad12ae310144f478f3d8930f336 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.5E-102 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ambt_13695 416e9ad12ae310144f478f3d8930f336 245 PIRSF PIRSF005650 4 245 8.9E-90 T 13-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 ambt_13695 416e9ad12ae310144f478f3d8930f336 245 SUPERFAMILY SSF53633 8 240 2.36E-72 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_13695 416e9ad12ae310144f478f3d8930f336 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.042 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ambt_13695 416e9ad12ae310144f478f3d8930f336 245 Pfam PF00696 Amino acid kinase family 11 219 1.1E-27 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ambt_13695 416e9ad12ae310144f478f3d8930f336 245 Gene3D G3DSA:3.40.1160.10 4 243 2.1E-75 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ambt_20680 ef0f92eb188c7aec40bbbf85fbe4ce9a 331 Gene3D G3DSA:2.40.160.10 117 325 2.2E-6 T 13-10-2018 IPR023614 Porin domain superfamily ambt_20680 ef0f92eb188c7aec40bbbf85fbe4ce9a 331 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 79 314 2.2E-11 T 13-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 ambt_20680 ef0f92eb188c7aec40bbbf85fbe4ce9a 331 SUPERFAMILY SSF56935 34 320 4.88E-24 T 13-10-2018 ambt_21180 670d68b108d40b5017e90a6d49fa110d 97 SUPERFAMILY SSF46689 14 97 2.82E-23 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_21180 670d68b108d40b5017e90a6d49fa110d 97 Gene3D G3DSA:1.10.10.60 1 97 2.8E-29 T 13-10-2018 ambt_21180 670d68b108d40b5017e90a6d49fa110d 97 Pfam PF02954 Bacterial regulatory protein, Fis family 54 94 8.8E-14 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_21180 670d68b108d40b5017e90a6d49fa110d 97 PIRSF PIRSF002097 1 97 4.1E-40 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ambt_21180 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 60 77 1.7E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_21180 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 77 97 1.7E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_21180 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 8 25 3.7E-16 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ambt_21180 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 41 56 3.7E-16 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ambt_21180 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 56 68 3.7E-16 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ambt_21180 670d68b108d40b5017e90a6d49fa110d 97 PRINTS PR01591 DNA-binding protein FIS signature 25 41 3.7E-16 T 13-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ambt_20020 aa02e2843dd2c205312770d63a788048 448 Pfam PF13347 MFS/sugar transport protein 9 426 1.7E-105 T 13-10-2018 ambt_20020 aa02e2843dd2c205312770d63a788048 448 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 7 437 6.6E-123 T 13-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 ambt_20020 aa02e2843dd2c205312770d63a788048 448 SUPERFAMILY SSF103473 8 425 4.05E-36 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_20020 aa02e2843dd2c205312770d63a788048 448 Gene3D G3DSA:1.20.1250.20 7 423 9.5E-26 T 13-10-2018 ambt_05140 6ac4570882cab8da997e6d08c5e76cff 753 SUPERFAMILY SSF56003 167 751 2.36E-136 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 ambt_05140 6ac4570882cab8da997e6d08c5e76cff 753 SMART SM01008 24 137 1.4E-17 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ambt_05140 6ac4570882cab8da997e6d08c5e76cff 753 Gene3D G3DSA:3.90.1170.50 1 135 3.2E-25 T 13-10-2018 ambt_05140 6ac4570882cab8da997e6d08c5e76cff 753 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 24 130 1.1E-17 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ambt_05140 6ac4570882cab8da997e6d08c5e76cff 753 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 162 689 5.2E-92 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 ambt_05140 6ac4570882cab8da997e6d08c5e76cff 753 Gene3D G3DSA:3.30.365.10 436 604 1.1E-93 T 13-10-2018 ambt_05140 6ac4570882cab8da997e6d08c5e76cff 753 SUPERFAMILY SSF54665 6 134 1.1E-27 T 13-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily ambt_05140 6ac4570882cab8da997e6d08c5e76cff 753 Gene3D G3DSA:3.30.365.10 186 280 1.8E-29 T 13-10-2018 ambt_05140 6ac4570882cab8da997e6d08c5e76cff 753 Gene3D G3DSA:3.30.365.10 363 746 1.1E-93 T 13-10-2018 ambt_05140 6ac4570882cab8da997e6d08c5e76cff 753 Gene3D G3DSA:3.30.365.10 167 300 1.8E-29 T 13-10-2018 ambt_07490 b8a18422a38412366efd31b0cbeb77b8 336 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 22 319 2.1E-77 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 ambt_07490 b8a18422a38412366efd31b0cbeb77b8 336 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 15 327 6.1E-102 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 ambt_07490 b8a18422a38412366efd31b0cbeb77b8 336 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 328 37.007 T 13-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 ambt_07490 b8a18422a38412366efd31b0cbeb77b8 336 SUPERFAMILY SSF52540 49 165 1.08E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_01310 5f9b572f84cdf5fd4e9446bc926dd126 347 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 181 316 5.2E-8 T 13-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ambt_01310 5f9b572f84cdf5fd4e9446bc926dd126 347 PIRSF PIRSF028458 12 347 1.5E-114 T 13-10-2018 IPR016886 Predicted glycerophosphotransferase UCP028458 ambt_01310 5f9b572f84cdf5fd4e9446bc926dd126 347 Gene3D G3DSA:3.40.50.12580 153 259 1.1E-8 T 13-10-2018 ambt_01310 5f9b572f84cdf5fd4e9446bc926dd126 347 SUPERFAMILY SSF53756 28 320 1.03E-33 T 13-10-2018 ambt_03140 77e259d813300ddd799a7b513923d1e7 403 SUPERFAMILY SSF52540 50 200 1.85E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_03140 77e259d813300ddd799a7b513923d1e7 403 Gene3D G3DSA:3.40.50.300 18 183 4.7E-19 T 13-10-2018 ambt_03140 77e259d813300ddd799a7b513923d1e7 403 Pfam PF03969 AFG1-like ATPase 339 398 1.3E-16 T 13-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 ambt_03140 77e259d813300ddd799a7b513923d1e7 403 Pfam PF03969 AFG1-like ATPase 5 303 3.8E-76 T 13-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 ambt_04565 41da1f8dd9c7a1b3418b7964f35399d8 201 SUPERFAMILY SSF47090 141 192 2.67E-6 T 13-10-2018 IPR036365 PGBD-like superfamily ambt_04565 41da1f8dd9c7a1b3418b7964f35399d8 201 Pfam PF01471 Putative peptidoglycan binding domain 144 189 7.8E-6 T 13-10-2018 IPR002477 Peptidoglycan binding-like ambt_18420 22f096c02a392211ac79f694e8d1c651 333 SUPERFAMILY SSF51679 1 330 1.44E-52 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ambt_18420 22f096c02a392211ac79f694e8d1c651 333 Gene3D G3DSA:3.20.20.30 1 330 1.1E-60 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ambt_18420 22f096c02a392211ac79f694e8d1c651 333 Pfam PF00296 Luciferase-like monooxygenase 11 306 7.9E-54 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ambt_18420 22f096c02a392211ac79f694e8d1c651 333 TIGRFAM TIGR03842 F420_CPS_4043: F420-dependent oxidoreductase, CPS_4043 family 2 332 5.2E-157 T 13-10-2018 IPR022315 F420-dependent oxidoreductase-predicted, CPS4043 ambt_17385 bcfa567f8ec312f0acb91d29f3588970 333 Gene3D G3DSA:3.40.50.2300 160 289 2.6E-64 T 13-10-2018 ambt_17385 bcfa567f8ec312f0acb91d29f3588970 333 SUPERFAMILY SSF53822 61 331 6.67E-70 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_17385 bcfa567f8ec312f0acb91d29f3588970 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.0E-7 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_17385 bcfa567f8ec312f0acb91d29f3588970 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.0E-7 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_17385 bcfa567f8ec312f0acb91d29f3588970 333 Gene3D G3DSA:3.40.50.2300 56 305 2.6E-64 T 13-10-2018 ambt_17385 bcfa567f8ec312f0acb91d29f3588970 333 Gene3D G3DSA:1.10.260.40 1 55 1.9E-24 T 13-10-2018 ambt_17385 bcfa567f8ec312f0acb91d29f3588970 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 ambt_17385 bcfa567f8ec312f0acb91d29f3588970 333 SUPERFAMILY SSF47413 1 59 7.22E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_17385 bcfa567f8ec312f0acb91d29f3588970 333 Pfam PF13377 Periplasmic binding protein-like domain 168 330 1.8E-29 T 13-10-2018 ambt_17385 bcfa567f8ec312f0acb91d29f3588970 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.3E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_17385 bcfa567f8ec312f0acb91d29f3588970 333 SMART SM00354 1 71 1.6E-30 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_11125 0e84be25a587802447dc2e5074588201 218 Gene3D G3DSA:3.40.50.1820 20 197 1.9E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_11125 0e84be25a587802447dc2e5074588201 218 Pfam PF12146 Serine aminopeptidase, S33 18 127 4.7E-8 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 ambt_11125 0e84be25a587802447dc2e5074588201 218 SUPERFAMILY SSF53474 17 160 2.56E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_20750 b95c0cddd96058440856ad9cf318c791 287 Pfam PF11185 Protein of unknown function (DUF2971) 145 213 4.8E-6 T 13-10-2018 IPR021352 Protein of unknown function DUF2971 ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 Gene3D G3DSA:3.40.50.2300 1 140 7.6E-29 T 13-10-2018 ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 SMART SM00448 2 118 3.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 Gene3D G3DSA:1.10.8.60 325 390 1.1E-12 T 13-10-2018 ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 SUPERFAMILY SSF52172 1 196 8.11E-34 T 13-10-2018 IPR011006 CheY-like superfamily ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 Gene3D G3DSA:1.10.10.60 399 447 4.1E-11 T 13-10-2018 ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 Gene3D G3DSA:3.40.50.300 141 324 1.0E-56 T 13-10-2018 ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 Pfam PF00072 Response regulator receiver domain 4 118 5.7E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 SUPERFAMILY SSF46689 357 444 3.12E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 SMART SM00382 173 316 3.1E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 Pfam PF02954 Bacterial regulatory protein, Fis family 407 441 4.3E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 SUPERFAMILY SSF52540 153 385 5.24E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 407 424 3.3E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 444 3.3E-8 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ambt_12690 b50d8c94664522a68b1dc6d0ba9f0740 447 Pfam PF00158 Sigma-54 interaction domain 154 319 1.4E-62 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ambt_16490 438da5ba19e7071fc44e27e52e033634 363 Gene3D G3DSA:3.40.50.2000 160 343 5.1E-61 T 13-10-2018 ambt_16490 438da5ba19e7071fc44e27e52e033634 363 Pfam PF13477 Glycosyl transferase 4-like 30 111 9.4E-9 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ambt_16490 438da5ba19e7071fc44e27e52e033634 363 SUPERFAMILY SSF53756 4 356 1.88E-64 T 13-10-2018 ambt_16490 438da5ba19e7071fc44e27e52e033634 363 Gene3D G3DSA:3.40.50.2000 35 356 5.1E-61 T 13-10-2018 ambt_16490 438da5ba19e7071fc44e27e52e033634 363 Pfam PF00534 Glycosyl transferases group 1 180 334 2.5E-31 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_20400 1dbc7cb7f37d800420add59b4d5829d4 701 SUPERFAMILY SSF56935 38 701 1.5E-98 T 13-10-2018 ambt_20400 1dbc7cb7f37d800420add59b4d5829d4 701 Gene3D G3DSA:2.170.130.10 43 170 1.9E-18 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_20400 1dbc7cb7f37d800420add59b4d5829d4 701 Pfam PF00593 TonB dependent receptor 184 700 3.4E-44 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_20400 1dbc7cb7f37d800420add59b4d5829d4 701 Gene3D G3DSA:2.40.170.20 194 701 4.6E-71 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_20400 1dbc7cb7f37d800420add59b4d5829d4 701 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 166 1.6E-9 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_14995 fc8924692082ac14de305b0e76959412 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 13-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 ambt_14995 fc8924692082ac14de305b0e76959412 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 5.8E-136 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 ambt_14995 fc8924692082ac14de305b0e76959412 337 SUPERFAMILY SSF53067 101 309 2.2E-44 T 13-10-2018 ambt_14995 fc8924692082ac14de305b0e76959412 337 Gene3D G3DSA:3.30.420.40 129 293 1.3E-132 T 13-10-2018 ambt_14995 fc8924692082ac14de305b0e76959412 337 Pfam PF00814 Glycoprotease family 24 307 8.2E-104 T 13-10-2018 IPR000905 Gcp-like domain ambt_14995 fc8924692082ac14de305b0e76959412 337 SUPERFAMILY SSF53067 3 123 2.65E-31 T 13-10-2018 ambt_14995 fc8924692082ac14de305b0e76959412 337 Gene3D G3DSA:3.30.420.40 3 315 1.3E-132 T 13-10-2018 ambt_14995 fc8924692082ac14de305b0e76959412 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 65.249 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 ambt_14995 fc8924692082ac14de305b0e76959412 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 4.6E-126 T 13-10-2018 IPR017861 Kae1/TsaD family ambt_14995 fc8924692082ac14de305b0e76959412 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 4.8E-51 T 13-10-2018 IPR017861 Kae1/TsaD family ambt_14995 fc8924692082ac14de305b0e76959412 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 4.8E-51 T 13-10-2018 IPR017861 Kae1/TsaD family ambt_14995 fc8924692082ac14de305b0e76959412 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 4.8E-51 T 13-10-2018 IPR017861 Kae1/TsaD family ambt_14995 fc8924692082ac14de305b0e76959412 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 4.8E-51 T 13-10-2018 IPR017861 Kae1/TsaD family ambt_14995 fc8924692082ac14de305b0e76959412 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 4.8E-51 T 13-10-2018 IPR017861 Kae1/TsaD family ambt_14995 fc8924692082ac14de305b0e76959412 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 4.8E-51 T 13-10-2018 IPR017861 Kae1/TsaD family ambt_12660 261c7772583fa2b23905fe83af53eb3b 391 SUPERFAMILY SSF103473 11 389 3.49E-40 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_12660 261c7772583fa2b23905fe83af53eb3b 391 Gene3D G3DSA:1.20.1250.20 197 390 2.0E-33 T 13-10-2018 ambt_12660 261c7772583fa2b23905fe83af53eb3b 391 PIRSF PIRSF004925 8 390 8.4E-88 T 13-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter ambt_12660 261c7772583fa2b23905fe83af53eb3b 391 Gene3D G3DSA:1.20.1250.20 8 196 1.2E-17 T 13-10-2018 ambt_12660 261c7772583fa2b23905fe83af53eb3b 391 Pfam PF12832 MFS_1 like family 14 368 3.9E-74 T 13-10-2018 IPR024989 Major facilitator superfamily associated domain ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.1E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.1E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 256 6.7E-43 T 13-10-2018 ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 8.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 8.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.1E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 Gene3D G3DSA:3.40.50.720 1 259 1.1E-65 T 13-10-2018 ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_17885 cda00e7bc28d59c6cf43ca40f5a773c1 265 SUPERFAMILY SSF51735 1 257 3.4E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_11360 01a9bad204be58dbadcbc37242be0aa0 449 Pfam PF04932 O-Antigen ligase 227 369 7.0E-17 T 13-10-2018 IPR007016 O-antigen ligase-related ambt_04505 97772c696a32c85630f86c199cb40cb5 322 Pfam PF00990 Diguanylate cyclase, GGDEF domain 157 318 6.7E-46 T 13-10-2018 IPR000160 GGDEF domain ambt_04505 97772c696a32c85630f86c199cb40cb5 322 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 319 1.6E-46 T 13-10-2018 IPR000160 GGDEF domain ambt_04505 97772c696a32c85630f86c199cb40cb5 322 SMART SM00267 146 322 4.2E-54 T 13-10-2018 IPR000160 GGDEF domain ambt_04505 97772c696a32c85630f86c199cb40cb5 322 Pfam PF13426 PAS domain 36 144 3.4E-9 T 13-10-2018 IPR000014 PAS domain ambt_04505 97772c696a32c85630f86c199cb40cb5 322 SMART SM00091 25 90 2.5E-4 T 13-10-2018 IPR000014 PAS domain ambt_04505 97772c696a32c85630f86c199cb40cb5 322 Gene3D G3DSA:3.30.450.20 22 147 2.2E-17 T 13-10-2018 ambt_04505 97772c696a32c85630f86c199cb40cb5 322 Gene3D G3DSA:3.30.70.270 148 322 6.2E-50 T 13-10-2018 ambt_04505 97772c696a32c85630f86c199cb40cb5 322 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 147 2.0E-7 T 13-10-2018 IPR000014 PAS domain ambt_04505 97772c696a32c85630f86c199cb40cb5 322 SUPERFAMILY SSF55785 27 144 1.03E-8 T 13-10-2018 IPR035965 PAS domain superfamily ambt_04505 97772c696a32c85630f86c199cb40cb5 322 SUPERFAMILY SSF55073 162 321 6.83E-43 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_03690 dda137645cf7f88f40aee72f085aa026 250 Pfam PF02698 DUF218 domain 106 240 9.9E-13 T 13-10-2018 IPR003848 Domain of unknown function DUF218 ambt_12260 b6329c540ac81f78e0b971bebd8aa094 425 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 6.0E-191 T 13-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 ambt_12260 b6329c540ac81f78e0b971bebd8aa094 425 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ambt_12260 b6329c540ac81f78e0b971bebd8aa094 425 PIRSF PIRSF001434 1 424 7.8E-124 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ambt_12260 b6329c540ac81f78e0b971bebd8aa094 425 Gene3D G3DSA:3.90.1150.10 289 425 6.7E-48 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_12260 b6329c540ac81f78e0b971bebd8aa094 425 Gene3D G3DSA:3.40.640.10 1 285 1.1E-95 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_12260 b6329c540ac81f78e0b971bebd8aa094 425 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 1.4E-137 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ambt_12260 b6329c540ac81f78e0b971bebd8aa094 425 SUPERFAMILY SSF53383 1 420 3.9E-123 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_11940 2622dd6b724f657398ff9c73ae463ee4 331 SUPERFAMILY SSF50129 1 154 2.43E-33 T 13-10-2018 IPR011032 GroES-like superfamily ambt_11940 2622dd6b724f657398ff9c73ae463ee4 331 Pfam PF13602 Zinc-binding dehydrogenase 191 327 4.8E-23 T 13-10-2018 ambt_11940 2622dd6b724f657398ff9c73ae463ee4 331 Gene3D G3DSA:3.90.180.10 19 314 1.2E-87 T 13-10-2018 ambt_11940 2622dd6b724f657398ff9c73ae463ee4 331 SUPERFAMILY SSF51735 120 296 7.6E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_11940 2622dd6b724f657398ff9c73ae463ee4 331 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 89 8.7E-8 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ambt_11940 2622dd6b724f657398ff9c73ae463ee4 331 SMART SM00829 10 327 2.3E-35 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ambt_11940 2622dd6b724f657398ff9c73ae463ee4 331 Gene3D G3DSA:3.40.50.720 128 296 1.2E-87 T 13-10-2018 ambt_11940 2622dd6b724f657398ff9c73ae463ee4 331 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 147 168 - T 13-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 ambt_20295 8635ca4be58b36f77badf9b2245278d2 861 Gene3D G3DSA:1.20.1640.10 688 859 2.2E-10 T 13-10-2018 ambt_20295 8635ca4be58b36f77badf9b2245278d2 861 Gene3D G3DSA:1.20.1640.10 194 389 5.5E-15 T 13-10-2018 ambt_20295 8635ca4be58b36f77badf9b2245278d2 861 SUPERFAMILY SSF82866 177 381 4.32E-29 T 13-10-2018 ambt_20295 8635ca4be58b36f77badf9b2245278d2 861 SUPERFAMILY SSF82866 640 859 6.93E-33 T 13-10-2018 ambt_20295 8635ca4be58b36f77badf9b2245278d2 861 Pfam PF03176 MMPL family 636 857 4.5E-17 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ambt_20295 8635ca4be58b36f77badf9b2245278d2 861 Pfam PF03176 MMPL family 163 383 2.7E-13 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ambt_08830 f0b61183c9d76ea9e4ced49ba84ff76c 289 Pfam PF00892 EamA-like transporter family 7 142 9.7E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_08830 f0b61183c9d76ea9e4ced49ba84ff76c 289 Pfam PF00892 EamA-like transporter family 153 284 9.5E-17 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_08830 f0b61183c9d76ea9e4ced49ba84ff76c 289 SUPERFAMILY SSF103481 40 146 2.22E-7 T 13-10-2018 ambt_08830 f0b61183c9d76ea9e4ced49ba84ff76c 289 SUPERFAMILY SSF103481 185 284 4.97E-13 T 13-10-2018 ambt_07780 e34f8c9c873f1865204ec4bc70883321 354 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 344 1.9E-91 T 13-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 ambt_11045 99d3bcce4b092b8f8235d7147ad8f256 108 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.441 T 13-10-2018 IPR002765 Uncharacterised protein family UPF0145 ambt_11045 99d3bcce4b092b8f8235d7147ad8f256 108 SUPERFAMILY SSF117782 1 105 3.66E-38 T 13-10-2018 IPR035439 UPF0145 domain superfamily ambt_11045 99d3bcce4b092b8f8235d7147ad8f256 108 Gene3D G3DSA:3.30.110.70 2 106 5.7E-43 T 13-10-2018 ambt_11045 99d3bcce4b092b8f8235d7147ad8f256 108 Pfam PF01906 Putative heavy-metal-binding 1 104 5.0E-40 T 13-10-2018 IPR002765 Uncharacterised protein family UPF0145 ambt_04100 4a34b922a153bea057787ed15b2834b0 301 Pfam PF03466 LysR substrate binding domain 96 293 5.1E-22 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_04100 4a34b922a153bea057787ed15b2834b0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 8.2E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_04100 4a34b922a153bea057787ed15b2834b0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 8.2E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_04100 4a34b922a153bea057787ed15b2834b0 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 8.2E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_04100 4a34b922a153bea057787ed15b2834b0 301 SUPERFAMILY SSF53850 92 296 1.05E-37 T 13-10-2018 ambt_04100 4a34b922a153bea057787ed15b2834b0 301 Gene3D G3DSA:1.10.10.10 1 87 1.2E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_04100 4a34b922a153bea057787ed15b2834b0 301 Gene3D G3DSA:3.40.190.10 96 291 2.8E-50 T 13-10-2018 ambt_04100 4a34b922a153bea057787ed15b2834b0 301 SUPERFAMILY SSF46785 1 84 9.37E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_04100 4a34b922a153bea057787ed15b2834b0 301 Gene3D G3DSA:3.40.190.10 171 268 2.8E-50 T 13-10-2018 ambt_04100 4a34b922a153bea057787ed15b2834b0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 1.0E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06145 5d1c2b701caa165c70c22e8ddcd46f92 197 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 9 191 1.1E-28 T 13-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal ambt_06145 5d1c2b701caa165c70c22e8ddcd46f92 197 SUPERFAMILY SSF53474 12 179 1.45E-13 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_06145 5d1c2b701caa165c70c22e8ddcd46f92 197 Gene3D G3DSA:3.40.50.1820 1 196 7.5E-32 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_18680 7b29b602e65bc6548eee4674ecf6ab70 397 SUPERFAMILY SSF56935 22 397 1.28E-18 T 13-10-2018 ambt_21495 01a51999fb10b6176523f76df997dd13 342 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 237 278 - T 13-10-2018 IPR000952 AB hydrolase 4, conserved site ambt_21495 01a51999fb10b6176523f76df997dd13 342 PIRSF PIRSF005211 1 337 5.3E-99 T 13-10-2018 IPR012020 AB hydrolase 4 family ambt_21495 01a51999fb10b6176523f76df997dd13 342 SUPERFAMILY SSF53474 34 310 3.65E-34 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_21495 01a51999fb10b6176523f76df997dd13 342 Pfam PF00561 alpha/beta hydrolase fold 70 312 1.3E-13 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_21495 01a51999fb10b6176523f76df997dd13 342 Gene3D G3DSA:3.40.50.1820 56 325 1.0E-20 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_19385 77c2d67c9e318ffcefe83cebb6e13c17 294 Pfam PF02219 Methylenetetrahydrofolate reductase 19 290 8.7E-95 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 ambt_19385 77c2d67c9e318ffcefe83cebb6e13c17 294 SUPERFAMILY SSF51730 21 292 2.55E-91 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like ambt_19385 77c2d67c9e318ffcefe83cebb6e13c17 294 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 23 289 5.2E-97 T 13-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 ambt_19385 77c2d67c9e318ffcefe83cebb6e13c17 294 Gene3D G3DSA:3.20.20.220 2 294 7.9E-104 T 13-10-2018 ambt_18935 08a5c5661618ef2c87ef1bb2df3d2d3f 581 Gene3D G3DSA:3.90.550.10 301 547 1.6E-26 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18935 08a5c5661618ef2c87ef1bb2df3d2d3f 581 Pfam PF00535 Glycosyl transferase family 2 317 449 6.4E-8 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_18935 08a5c5661618ef2c87ef1bb2df3d2d3f 581 SUPERFAMILY SSF53448 312 573 5.63E-32 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_21710 ec0ead31e04e5ae3d7e6e34106efea7e 350 Pfam PF02628 Cytochrome oxidase assembly protein 3 328 1.1E-87 T 13-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 ambt_02305 615216657c31dca85ec90299b3c03e10 289 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 288 4.6E-32 T 13-10-2018 IPR031347 Protein AmpE ambt_07335 5ec9865f3a9277e18dd7cd6de36d3744 141 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 126 3.6E-46 T 13-10-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 ambt_07335 5ec9865f3a9277e18dd7cd6de36d3744 141 Gene3D G3DSA:1.10.1660.10 1 129 2.1E-32 T 13-10-2018 ambt_07335 5ec9865f3a9277e18dd7cd6de36d3744 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.3E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_07335 5ec9865f3a9277e18dd7cd6de36d3744 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.3E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_07335 5ec9865f3a9277e18dd7cd6de36d3744 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.3E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_07335 5ec9865f3a9277e18dd7cd6de36d3744 141 SUPERFAMILY SSF46955 1 116 3.37E-32 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily ambt_07335 5ec9865f3a9277e18dd7cd6de36d3744 141 Pfam PF13411 MerR HTH family regulatory protein 1 68 2.9E-18 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_07335 5ec9865f3a9277e18dd7cd6de36d3744 141 SMART SM00422 1 70 3.4E-25 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_14800 5b5e199a6a1beeed714834005e916330 275 Gene3D G3DSA:1.10.8.100 203 268 6.3E-22 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 ambt_14800 5b5e199a6a1beeed714834005e916330 275 Pfam PF00398 Ribosomal RNA adenine dimethylase 8 265 4.4E-77 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ambt_14800 5b5e199a6a1beeed714834005e916330 275 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 8 267 55.192 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ambt_14800 5b5e199a6a1beeed714834005e916330 275 SUPERFAMILY SSF53335 7 266 9.44E-75 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_14800 5b5e199a6a1beeed714834005e916330 275 Gene3D G3DSA:3.40.50.150 2 201 1.4E-62 T 13-10-2018 ambt_14800 5b5e199a6a1beeed714834005e916330 275 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 40 67 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 ambt_14800 5b5e199a6a1beeed714834005e916330 275 SMART SM00650 24 200 3.2E-81 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 ambt_14800 5b5e199a6a1beeed714834005e916330 275 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 265 8.5E-89 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ambt_09205 0854a969943975724855b8196a24533c 310 SUPERFAMILY SSF50891 188 292 3.79E-6 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily ambt_09205 0854a969943975724855b8196a24533c 310 Gene3D G3DSA:2.40.100.10 177 308 1.4E-35 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily ambt_09205 0854a969943975724855b8196a24533c 310 SMART SM00797 24 304 7.3E-78 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ambt_09205 0854a969943975724855b8196a24533c 310 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 286 1.2E-69 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ambt_13995 97f403688ee6f84836a67438e26447aa 329 SUPERFAMILY SSF53474 34 328 8.51E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_13995 97f403688ee6f84836a67438e26447aa 329 Pfam PF12146 Serine aminopeptidase, S33 64 274 2.9E-18 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 ambt_13995 97f403688ee6f84836a67438e26447aa 329 PRINTS PR00111 Alpha/beta hydrolase fold signature 150 163 3.0E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_13995 97f403688ee6f84836a67438e26447aa 329 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 106 3.0E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_13995 97f403688ee6f84836a67438e26447aa 329 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 3.0E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_13995 97f403688ee6f84836a67438e26447aa 329 Gene3D G3DSA:3.40.50.1820 22 329 4.5E-71 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_14555 7bed8661dc63cf7d658c7a9a84a91273 221 Gene3D G3DSA:3.10.450.710 25 205 2.2E-45 T 13-10-2018 ambt_14555 7bed8661dc63cf7d658c7a9a84a91273 221 PIRSF PIRSF004649 1 212 2.1E-62 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC ambt_14555 7bed8661dc63cf7d658c7a9a84a91273 221 Pfam PF05494 MlaC protein 36 199 3.4E-49 T 13-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC ambt_11705 4e053efe298d53d785b9cec67a57a138 122 TIGRFAM TIGR00526 folB_dom: FolB domain 7 119 8.7E-31 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ambt_11705 4e053efe298d53d785b9cec67a57a138 122 SUPERFAMILY SSF55620 5 116 2.06E-29 T 13-10-2018 ambt_11705 4e053efe298d53d785b9cec67a57a138 122 Pfam PF02152 Dihydroneopterin aldolase 8 116 3.1E-27 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ambt_11705 4e053efe298d53d785b9cec67a57a138 122 Gene3D G3DSA:3.30.1130.10 1 120 1.5E-40 T 13-10-2018 ambt_11705 4e053efe298d53d785b9cec67a57a138 122 SMART SM00905 8 118 1.6E-32 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ambt_19315 dca268ac5f1eebff3d33f3ba3dcf61ca 394 Gene3D G3DSA:2.40.30.170 279 374 1.9E-12 T 13-10-2018 ambt_19315 dca268ac5f1eebff3d33f3ba3dcf61ca 394 Gene3D G3DSA:1.10.287.470 80 229 1.9E-12 T 13-10-2018 ambt_19315 dca268ac5f1eebff3d33f3ba3dcf61ca 394 Gene3D G3DSA:2.40.50.100 55 278 1.9E-12 T 13-10-2018 ambt_19315 dca268ac5f1eebff3d33f3ba3dcf61ca 394 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 254 275 2.4E-20 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_19315 dca268ac5f1eebff3d33f3ba3dcf61ca 394 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 377 394 2.4E-20 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_19315 dca268ac5f1eebff3d33f3ba3dcf61ca 394 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 2.4E-20 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_19315 dca268ac5f1eebff3d33f3ba3dcf61ca 394 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 287 311 2.4E-20 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_19315 dca268ac5f1eebff3d33f3ba3dcf61ca 394 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 377 2.4E-20 T 13-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ambt_19315 dca268ac5f1eebff3d33f3ba3dcf61ca 394 Pfam PF13437 HlyD family secretion protein 243 329 1.8E-9 T 13-10-2018 ambt_19315 dca268ac5f1eebff3d33f3ba3dcf61ca 394 Pfam PF13533 Biotin-lipoyl like 55 79 1.6E-5 T 13-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain ambt_16505 9379f65e36e948dff3433dd85854d174 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_16505 9379f65e36e948dff3433dd85854d174 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.142 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_16505 9379f65e36e948dff3433dd85854d174 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 5.6E-58 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_16505 9379f65e36e948dff3433dd85854d174 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.9E-39 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_16505 9379f65e36e948dff3433dd85854d174 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.9E-39 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_16505 9379f65e36e948dff3433dd85854d174 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.9E-39 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_16505 9379f65e36e948dff3433dd85854d174 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.9E-39 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_16505 9379f65e36e948dff3433dd85854d174 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.0E-47 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 ambt_16505 9379f65e36e948dff3433dd85854d174 137 SUPERFAMILY SSF54686 1 134 7.85E-54 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 ambt_16505 9379f65e36e948dff3433dd85854d174 137 Gene3D G3DSA:3.90.1170.10 1 137 6.9E-55 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 ambt_17830 2ad38b7d4cae179102a727f5212de535 281 PIRSF PIRSF001500 1 279 1.8E-53 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ambt_17830 2ad38b7d4cae179102a727f5212de535 281 Gene3D G3DSA:3.40.190.10 7 180 1.7E-34 T 13-10-2018 ambt_17830 2ad38b7d4cae179102a727f5212de535 281 Gene3D G3DSA:3.40.190.10 87 171 1.7E-34 T 13-10-2018 ambt_17830 2ad38b7d4cae179102a727f5212de535 281 Pfam PF00800 Prephenate dehydratase 4 184 1.9E-36 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ambt_17830 2ad38b7d4cae179102a727f5212de535 281 Pfam PF01842 ACT domain 208 262 3.1E-7 T 13-10-2018 IPR002912 ACT domain ambt_17830 2ad38b7d4cae179102a727f5212de535 281 SUPERFAMILY SSF55021 177 268 1.04E-18 T 13-10-2018 ambt_17830 2ad38b7d4cae179102a727f5212de535 281 SUPERFAMILY SSF53850 3 184 8.79E-37 T 13-10-2018 ambt_17830 2ad38b7d4cae179102a727f5212de535 281 Gene3D G3DSA:3.30.70.260 193 279 3.8E-28 T 13-10-2018 ambt_20155 5f145c5a323c998bb933cc729bcc0cfd 439 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 84 173 2.7E-9 T 13-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 ambt_20155 5f145c5a323c998bb933cc729bcc0cfd 439 SUPERFAMILY SSF53474 74 392 4.02E-27 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_20155 5f145c5a323c998bb933cc729bcc0cfd 439 Gene3D G3DSA:3.40.50.1820 34 407 1.1E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_14345 e5bcc336f63cbba18885aa7504c53e6a 422 Pfam PF01384 Phosphate transporter family 26 409 8.2E-113 T 13-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 ambt_12965 ff9b83859d4663fc07d0e1723995d65b 934 Gene3D G3DSA:2.170.130.10 37 170 3.0E-40 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_12965 ff9b83859d4663fc07d0e1723995d65b 934 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 165 3.7E-28 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_12965 ff9b83859d4663fc07d0e1723995d65b 934 Pfam PF00593 TonB dependent receptor 346 932 9.1E-45 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_12965 ff9b83859d4663fc07d0e1723995d65b 934 SUPERFAMILY SSF56935 42 934 3.97E-106 T 13-10-2018 ambt_07650 660e77c04ae07cd3b654273486989b19 703 Gene3D G3DSA:3.20.20.80 89 270 1.8E-23 T 13-10-2018 ambt_07650 660e77c04ae07cd3b654273486989b19 703 Gene3D G3DSA:3.20.20.80 317 557 2.7E-38 T 13-10-2018 ambt_07650 660e77c04ae07cd3b654273486989b19 703 SMART SM00642 97 548 2.7E-7 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_07650 660e77c04ae07cd3b654273486989b19 703 SUPERFAMILY SSF51445 90 576 1.34E-83 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_07650 660e77c04ae07cd3b654273486989b19 703 Pfam PF00128 Alpha amylase, catalytic domain 132 242 2.0E-10 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_07650 660e77c04ae07cd3b654273486989b19 703 Pfam PF00128 Alpha amylase, catalytic domain 349 517 1.8E-11 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_20655 196e7d10a1a381a028ee3a1f3b7e16e6 231 SMART SM00382 26 218 4.7E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_20655 196e7d10a1a381a028ee3a1f3b7e16e6 231 Pfam PF00005 ABC transporter 19 159 8.4E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_20655 196e7d10a1a381a028ee3a1f3b7e16e6 231 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 3 231 1.3E-93 T 13-10-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE ambt_20655 196e7d10a1a381a028ee3a1f3b7e16e6 231 SUPERFAMILY SSF52540 1 222 2.36E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20655 196e7d10a1a381a028ee3a1f3b7e16e6 231 Gene3D G3DSA:3.40.50.300 1 230 5.1E-57 T 13-10-2018 ambt_03490 7de54c8a89481b502662c3dcec13e096 769 Gene3D G3DSA:1.20.1640.10 184 390 2.3E-12 T 13-10-2018 ambt_03490 7de54c8a89481b502662c3dcec13e096 769 Gene3D G3DSA:1.20.1640.10 584 767 1.1E-15 T 13-10-2018 ambt_03490 7de54c8a89481b502662c3dcec13e096 769 Pfam PF03176 MMPL family 54 377 4.0E-21 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ambt_03490 7de54c8a89481b502662c3dcec13e096 769 Pfam PF03176 MMPL family 579 755 1.4E-10 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ambt_03490 7de54c8a89481b502662c3dcec13e096 769 SUPERFAMILY SSF82866 592 756 5.62E-30 T 13-10-2018 ambt_03490 7de54c8a89481b502662c3dcec13e096 769 PRINTS PR00702 Acriflavin resistance protein family signature 653 677 2.5E-6 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03490 7de54c8a89481b502662c3dcec13e096 769 PRINTS PR00702 Acriflavin resistance protein family signature 728 751 2.5E-6 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03490 7de54c8a89481b502662c3dcec13e096 769 PRINTS PR00702 Acriflavin resistance protein family signature 242 266 2.5E-6 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03490 7de54c8a89481b502662c3dcec13e096 769 PRINTS PR00702 Acriflavin resistance protein family signature 598 621 2.5E-6 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ambt_03490 7de54c8a89481b502662c3dcec13e096 769 SUPERFAMILY SSF82866 154 373 1.7E-29 T 13-10-2018 ambt_16905 ccfb713a14ee10115d53cefaeb5238c2 448 Pfam PF02661 Fic/DOC family 181 291 1.9E-18 T 13-10-2018 IPR003812 Fido domain ambt_16905 ccfb713a14ee10115d53cefaeb5238c2 448 Gene3D G3DSA:1.10.3290.10 109 363 7.7E-49 T 13-10-2018 IPR036597 Fido-like domain superfamily ambt_16905 ccfb713a14ee10115d53cefaeb5238c2 448 SUPERFAMILY SSF140931 159 359 3.01E-29 T 13-10-2018 IPR036597 Fido-like domain superfamily ambt_09395 cde101bc1333887a122bc233ba45a782 97 Pfam PF06844 Protein of unknown function (DUF1244) 27 92 3.7E-34 T 13-10-2018 IPR023163 SMc04008-like domain ambt_09395 cde101bc1333887a122bc233ba45a782 97 Gene3D G3DSA:1.10.3340.10 1 97 1.9E-43 T 13-10-2018 IPR036810 SMc04008-like superfamily ambt_09395 cde101bc1333887a122bc233ba45a782 97 SUPERFAMILY SSF158757 1 77 1.57E-35 T 13-10-2018 IPR036810 SMc04008-like superfamily ambt_14165 1a49a7adc496aa264ec38f0f4bac89d8 97 PIRSF PIRSF029218 1 95 3.2E-23 T 13-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 ambt_14165 1a49a7adc496aa264ec38f0f4bac89d8 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 89 1.6E-11 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ambt_14165 1a49a7adc496aa264ec38f0f4bac89d8 97 Gene3D G3DSA:3.30.2310.20 1 93 1.4E-21 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ambt_09915 fcd1fb69edd8aad3de61db31d301b513 169 SUPERFAMILY SSF51261 42 139 3.66E-21 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_09915 fcd1fb69edd8aad3de61db31d301b513 169 Gene3D G3DSA:2.70.70.10 16 169 2.0E-26 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_09915 fcd1fb69edd8aad3de61db31d301b513 169 Pfam PF01551 Peptidase family M23 49 136 1.3E-18 T 13-10-2018 IPR016047 Peptidase M23 ambt_02125 a3f70eb9c77cbf0d264f8a649905c137 359 Gene3D G3DSA:3.40.50.1820 84 317 1.9E-28 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_02125 a3f70eb9c77cbf0d264f8a649905c137 359 Pfam PF12146 Serine aminopeptidase, S33 93 226 1.2E-10 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 ambt_02125 a3f70eb9c77cbf0d264f8a649905c137 359 SUPERFAMILY SSF53474 88 303 3.24E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_14805 6a1f1f2c3547477f460355718b7c6382 124 SUPERFAMILY SSF110069 4 124 3.92E-47 T 13-10-2018 IPR036767 ApaG domain superfamily ambt_14805 6a1f1f2c3547477f460355718b7c6382 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 29.61 T 13-10-2018 IPR023065 Uncharacterised protein family ApaG ambt_14805 6a1f1f2c3547477f460355718b7c6382 124 Gene3D G3DSA:2.60.40.1470 1 124 6.7E-47 T 13-10-2018 IPR036767 ApaG domain superfamily ambt_14805 6a1f1f2c3547477f460355718b7c6382 124 Pfam PF04379 ApaG domain 21 101 4.7E-33 T 13-10-2018 IPR007474 ApaG domain ambt_18195 cd720f842fb4ab57a58bdcf883e64ee1 234 SUPERFAMILY SSF46565 170 229 1.22E-12 T 13-10-2018 IPR036869 Chaperone J-domain superfamily ambt_18195 cd720f842fb4ab57a58bdcf883e64ee1 234 Pfam PF12339 DNA-J related protein 32 163 6.7E-39 T 13-10-2018 IPR021059 DnaJ-related protein, N-terminal ambt_18195 cd720f842fb4ab57a58bdcf883e64ee1 234 Gene3D G3DSA:1.10.287.110 170 232 1.9E-12 T 13-10-2018 IPR036869 Chaperone J-domain superfamily ambt_20410 edff3c2274445da2d59c7d9d1430eb71 335 SUPERFAMILY SSF53167 44 316 8.16E-40 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ambt_20410 edff3c2274445da2d59c7d9d1430eb71 335 Pfam PF01048 Phosphorylase superfamily 44 333 1.5E-42 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ambt_14710 7d739bbd624f67a776cacd6704443efb 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.233 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid ambt_14710 7d739bbd624f67a776cacd6704443efb 130 SUPERFAMILY SSF54211 5 130 5.69E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_14710 7d739bbd624f67a776cacd6704443efb 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 ambt_14710 7d739bbd624f67a776cacd6704443efb 130 Gene3D G3DSA:3.30.230.10 1 130 2.6E-53 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ambt_14710 7d739bbd624f67a776cacd6704443efb 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.6E-45 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 ambt_18410 fb828c561e69e011c6a25f83dcf4c340 260 Gene3D G3DSA:3.90.1660.10 56 259 8.9E-78 T 13-10-2018 ambt_18410 fb828c561e69e011c6a25f83dcf4c340 260 TIGRFAM TIGR01916 F420_cofE: coenzyme F420-0:L-glutamate ligase 6 259 2.9E-75 T 13-10-2018 IPR008225 Coenzyme F420:L-glutamate ligase GO:0043773|GO:0046872|GO:0051188 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 ambt_18410 fb828c561e69e011c6a25f83dcf4c340 260 SUPERFAMILY SSF144010 5 259 2.35E-64 T 13-10-2018 ambt_18410 fb828c561e69e011c6a25f83dcf4c340 260 Gene3D G3DSA:3.30.1330.100 9 246 8.9E-78 T 13-10-2018 ambt_18410 fb828c561e69e011c6a25f83dcf4c340 260 Pfam PF01996 F420-0:Gamma-glutamyl ligase 12 236 1.5E-55 T 13-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 ambt_14745 9b31b4776396958409618f3bc7612101 125 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 8.1E-30 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ambt_14745 9b31b4776396958409618f3bc7612101 125 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 124 1.1E-35 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ambt_14745 9b31b4776396958409618f3bc7612101 125 Gene3D G3DSA:3.90.470.20 1 125 4.0E-35 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ambt_14745 9b31b4776396958409618f3bc7612101 125 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 120 9.6E-21 T 13-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ambt_14745 9b31b4776396958409618f3bc7612101 125 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 124 8.0E-21 T 13-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ambt_14745 9b31b4776396958409618f3bc7612101 125 SUPERFAMILY SSF56214 3 124 2.62E-29 T 13-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ambt_14745 9b31b4776396958409618f3bc7612101 125 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 125 23.29 T 13-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ambt_05805 fb10b065a376e191b7c772beedb45748 478 PRINTS PR01050 Pyruvate kinase family signature 60 76 4.0E-51 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 PRINTS PR01050 Pyruvate kinase family signature 187 201 4.0E-51 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 PRINTS PR01050 Pyruvate kinase family signature 297 315 4.0E-51 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 PRINTS PR01050 Pyruvate kinase family signature 272 296 4.0E-51 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 PRINTS PR01050 Pyruvate kinase family signature 316 332 4.0E-51 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 PRINTS PR01050 Pyruvate kinase family signature 220 246 4.0E-51 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 PRINTS PR01050 Pyruvate kinase family signature 247 271 4.0E-51 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 Gene3D G3DSA:3.20.20.60 3 338 2.6E-154 T 13-10-2018 ambt_05805 fb10b065a376e191b7c772beedb45748 478 SUPERFAMILY SSF51621 2 342 9.42E-87 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ambt_05805 fb10b065a376e191b7c772beedb45748 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 477 2.7E-163 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 Gene3D G3DSA:3.40.1380.20 339 473 2.6E-154 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 SUPERFAMILY SSF52935 326 477 2.75E-35 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 Pfam PF00224 Pyruvate kinase, barrel domain 3 341 2.4E-127 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 SUPERFAMILY SSF50800 71 166 1.6E-24 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily ambt_05805 fb10b065a376e191b7c772beedb45748 478 Gene3D G3DSA:2.40.33.10 71 169 2.6E-154 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_05805 fb10b065a376e191b7c772beedb45748 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 475 3.5E-28 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ambt_07765 758ca3e9dad2d515e6e83c2fed21af8d 185 Pfam PF13242 HAD-hyrolase-like 109 156 5.8E-9 T 13-10-2018 ambt_07765 758ca3e9dad2d515e6e83c2fed21af8d 185 SUPERFAMILY SSF56784 5 166 5.91E-40 T 13-10-2018 IPR036412 HAD-like superfamily ambt_07765 758ca3e9dad2d515e6e83c2fed21af8d 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 150 3.7E-27 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 ambt_07765 758ca3e9dad2d515e6e83c2fed21af8d 185 PIRSF PIRSF004682 1 180 1.3E-52 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 ambt_07765 758ca3e9dad2d515e6e83c2fed21af8d 185 Gene3D G3DSA:3.40.50.1000 1 181 2.0E-50 T 13-10-2018 IPR023214 HAD superfamily ambt_07765 758ca3e9dad2d515e6e83c2fed21af8d 185 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 7 152 6.5E-37 T 13-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 ambt_07765 758ca3e9dad2d515e6e83c2fed21af8d 185 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 179 8.8E-53 T 13-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 ambt_16325 c214d2b8b120e62d9679c8b3be69e1d2 415 Pfam PF00909 Ammonium Transporter Family 16 407 7.7E-96 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 ambt_16325 c214d2b8b120e62d9679c8b3be69e1d2 415 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 9 410 9.1E-198 T 13-10-2018 IPR019879 Ammonium transporter, marine subtype ambt_16325 c214d2b8b120e62d9679c8b3be69e1d2 415 Gene3D G3DSA:1.10.3430.10 4 414 9.1E-119 T 13-10-2018 IPR029020 Ammonium/urea transporter ambt_16325 c214d2b8b120e62d9679c8b3be69e1d2 415 SUPERFAMILY SSF111352 10 388 2.88E-100 T 13-10-2018 ambt_16325 c214d2b8b120e62d9679c8b3be69e1d2 415 ProSitePatterns PS01219 Ammonium transporters signature. 168 193 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 ambt_00690 77fe15e86bb2a67ee48f60f42fa1c8c5 161 SMART SM00173 1 160 4.0E-8 T 13-10-2018 ambt_00690 77fe15e86bb2a67ee48f60f42fa1c8c5 161 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 158 1.6E-19 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ambt_00690 77fe15e86bb2a67ee48f60f42fa1c8c5 161 SUPERFAMILY SSF52540 4 159 2.13E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_00690 77fe15e86bb2a67ee48f60f42fa1c8c5 161 Pfam PF00071 Ras family 5 159 1.1E-29 T 13-10-2018 IPR001806 Small GTPase GO:0003924|GO:0005525 ambt_00690 77fe15e86bb2a67ee48f60f42fa1c8c5 161 Gene3D G3DSA:3.40.50.300 2 160 4.6E-43 T 13-10-2018 ambt_00690 77fe15e86bb2a67ee48f60f42fa1c8c5 161 PRINTS PR00449 Transforming protein P21 ras signature 140 161 2.7E-23 T 13-10-2018 ambt_00690 77fe15e86bb2a67ee48f60f42fa1c8c5 161 PRINTS PR00449 Transforming protein P21 ras signature 45 67 2.7E-23 T 13-10-2018 ambt_00690 77fe15e86bb2a67ee48f60f42fa1c8c5 161 PRINTS PR00449 Transforming protein P21 ras signature 4 25 2.7E-23 T 13-10-2018 ambt_00690 77fe15e86bb2a67ee48f60f42fa1c8c5 161 PRINTS PR00449 Transforming protein P21 ras signature 27 43 2.7E-23 T 13-10-2018 ambt_00690 77fe15e86bb2a67ee48f60f42fa1c8c5 161 PRINTS PR00449 Transforming protein P21 ras signature 106 119 2.7E-23 T 13-10-2018 ambt_00690 77fe15e86bb2a67ee48f60f42fa1c8c5 161 SMART SM00175 5 159 5.4E-11 T 13-10-2018 ambt_02745 0c1a959e0010ef8ce24e349f0c1c72e9 475 SUPERFAMILY SSF46785 1 70 3.2E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_02745 0c1a959e0010ef8ce24e349f0c1c72e9 475 Gene3D G3DSA:3.40.640.10 146 365 4.0E-96 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_02745 0c1a959e0010ef8ce24e349f0c1c72e9 475 Gene3D G3DSA:3.90.1150.10 113 470 4.0E-96 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_02745 0c1a959e0010ef8ce24e349f0c1c72e9 475 Pfam PF00155 Aminotransferase class I and II 146 457 7.5E-37 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ambt_02745 0c1a959e0010ef8ce24e349f0c1c72e9 475 SUPERFAMILY SSF53383 113 472 2.29E-87 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_02745 0c1a959e0010ef8ce24e349f0c1c72e9 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.6E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_02745 0c1a959e0010ef8ce24e349f0c1c72e9 475 SMART SM00345 7 66 1.0E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_02745 0c1a959e0010ef8ce24e349f0c1c72e9 475 Gene3D G3DSA:1.10.10.10 1 101 3.3E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_11570 d8d60e8384f3ebc127461fe0e89f0873 561 PIRSF PIRSF003128 1 561 5.8E-150 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ambt_11570 d8d60e8384f3ebc127461fe0e89f0873 561 SUPERFAMILY SSF52540 1 520 2.15E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_11570 d8d60e8384f3ebc127461fe0e89f0873 561 Gene3D G3DSA:3.40.50.300 1 269 6.0E-44 T 13-10-2018 ambt_11570 d8d60e8384f3ebc127461fe0e89f0873 561 Gene3D G3DSA:3.40.50.300 273 557 6.9E-47 T 13-10-2018 ambt_11570 d8d60e8384f3ebc127461fe0e89f0873 561 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 516 3.0E-24 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ambt_11570 d8d60e8384f3ebc127461fe0e89f0873 561 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 556 2.2E-163 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ambt_05130 e2a21cde2310569b31ad16827e3a105d 165 SUPERFAMILY SSF54292 3 77 7.73E-25 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ambt_05130 e2a21cde2310569b31ad16827e3a105d 165 Gene3D G3DSA:3.10.20.30 1 73 2.7E-28 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_05130 e2a21cde2310569b31ad16827e3a105d 165 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 56 3.4E-6 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ambt_05130 e2a21cde2310569b31ad16827e3a105d 165 Gene3D G3DSA:1.10.150.120 74 165 1.8E-30 T 13-10-2018 ambt_05130 e2a21cde2310569b31ad16827e3a105d 165 Pfam PF01799 [2Fe-2S] binding domain 72 156 8.3E-29 T 13-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 ambt_05130 e2a21cde2310569b31ad16827e3a105d 165 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ambt_05130 e2a21cde2310569b31ad16827e3a105d 165 SUPERFAMILY SSF47741 83 162 1.44E-25 T 13-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily ambt_13045 2cf1348f2d6f953b8f9fdcf35b2783fa 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 296 1.7E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ambt_13045 2cf1348f2d6f953b8f9fdcf35b2783fa 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 66 2.7E-12 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ambt_13045 2cf1348f2d6f953b8f9fdcf35b2783fa 297 Gene3D G3DSA:1.10.3720.10 86 294 5.6E-18 T 13-10-2018 IPR035906 MetI-like superfamily ambt_13045 2cf1348f2d6f953b8f9fdcf35b2783fa 297 SUPERFAMILY SSF161098 90 278 4.58E-22 T 13-10-2018 IPR035906 MetI-like superfamily ambt_17140 68773cf39c9864fb49b068f076b58b62 195 Pfam PF02545 Maf-like protein 5 191 2.1E-55 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 ambt_17140 68773cf39c9864fb49b068f076b58b62 195 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 190 1.2E-50 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 ambt_17140 68773cf39c9864fb49b068f076b58b62 195 PIRSF PIRSF006305 1 195 1.6E-52 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 ambt_17140 68773cf39c9864fb49b068f076b58b62 195 SUPERFAMILY SSF52972 3 191 8.5E-59 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ambt_17140 68773cf39c9864fb49b068f076b58b62 195 Hamap MF_00528 Septum formation protein Maf [maf]. 4 195 28.903 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 ambt_17140 68773cf39c9864fb49b068f076b58b62 195 Gene3D G3DSA:3.90.950.10 4 195 2.3E-64 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 44 486 7.5E-141 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 35 540 6.8E-214 T 13-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 81 104 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 34 59 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 182 200 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 211 230 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 445 466 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 332 353 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 367 385 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 108 132 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 262 283 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 150 162 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 308 323 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 395 414 2.0E-89 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 Gene3D G3DSA:1.20.210.10 29 548 2.7E-188 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 264 318 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09280 72a5ddfadf6af69d449809e6a7a3405e 647 SUPERFAMILY SSF81442 31 542 1.44E-164 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_10805 0296c650bbf771b3c78d4fa6fa132753 116 Pfam PF01627 Hpt domain 28 106 2.2E-8 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_10805 0296c650bbf771b3c78d4fa6fa132753 116 SUPERFAMILY SSF47226 12 111 2.88E-19 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_10805 0296c650bbf771b3c78d4fa6fa132753 116 Gene3D G3DSA:1.20.120.160 4 113 6.1E-19 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_04160 3ddb39e26f534680a482df16a7468755 210 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 35 2.7E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04160 3ddb39e26f534680a482df16a7468755 210 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 35 7.5E-7 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_03055 c35109b3b9343a91847ac58aeb52c995 349 Pfam PF14240 YHYH protein 196 304 3.0E-10 T 13-10-2018 IPR025924 YHYH domain ambt_10400 01f122e6d161022a4214be98da54695d 199 Pfam PF07238 PilZ domain 95 179 1.7E-8 T 13-10-2018 IPR009875 PilZ domain GO:0035438 ambt_13180 bc114638ebcc016446709bc0a78cfba2 254 SUPERFAMILY SSF52540 1 253 6.41E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13180 bc114638ebcc016446709bc0a78cfba2 254 Pfam PF13614 AAA domain 1 181 3.6E-49 T 13-10-2018 IPR025669 AAA domain ambt_13180 bc114638ebcc016446709bc0a78cfba2 254 Gene3D G3DSA:3.40.50.300 1 254 1.0E-67 T 13-10-2018 ambt_08365 f78a49b7fc7895176714b3dc34f835b1 168 SUPERFAMILY SSF54427 27 157 8.77E-11 T 13-10-2018 IPR032710 NTF2-like domain superfamily ambt_08365 f78a49b7fc7895176714b3dc34f835b1 168 Gene3D G3DSA:3.10.450.50 22 164 3.0E-5 T 13-10-2018 ambt_20105 d365bedf264c28f062a33bcb80f14c1a 249 SUPERFAMILY SSF46785 18 87 2.9E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_20105 d365bedf264c28f062a33bcb80f14c1a 249 SMART SM00345 24 83 1.6E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_20105 d365bedf264c28f062a33bcb80f14c1a 249 Pfam PF07702 UTRA domain 108 243 2.9E-31 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ambt_20105 d365bedf264c28f062a33bcb80f14c1a 249 Gene3D G3DSA:1.10.10.10 16 92 1.6E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_20105 d365bedf264c28f062a33bcb80f14c1a 249 SUPERFAMILY SSF64288 72 248 4.71E-38 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ambt_20105 d365bedf264c28f062a33bcb80f14c1a 249 SMART SM00866 103 243 2.1E-23 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ambt_20105 d365bedf264c28f062a33bcb80f14c1a 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 83 3.9E-22 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_20105 d365bedf264c28f062a33bcb80f14c1a 249 Gene3D G3DSA:3.40.1410.10 93 248 1.7E-38 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ambt_18300 830a5663227a0554a84471e142562caa 243 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 194 35.977 T 13-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 ambt_18300 830a5663227a0554a84471e142562caa 243 Pfam PF00588 SpoU rRNA Methylase family 20 158 2.1E-33 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ambt_18300 830a5663227a0554a84471e142562caa 243 SUPERFAMILY SSF75217 4 185 1.44E-47 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases ambt_18300 830a5663227a0554a84471e142562caa 243 Gene3D G3DSA:3.40.1280.10 1 200 1.6E-59 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ambt_18300 830a5663227a0554a84471e142562caa 243 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 214 2.0E-22 T 13-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 ambt_13465 1b82bdd0e26141929cf4c217dd2d2be4 709 PRINTS PR01005 Flagellar hook-associated protein signature 13 36 5.5E-6 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ambt_13465 1b82bdd0e26141929cf4c217dd2d2be4 709 PRINTS PR01005 Flagellar hook-associated protein signature 149 173 5.5E-6 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ambt_13465 1b82bdd0e26141929cf4c217dd2d2be4 709 SUPERFAMILY SSF64518 474 706 7.19E-20 T 13-10-2018 ambt_13465 1b82bdd0e26141929cf4c217dd2d2be4 709 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 663 706 3.2E-9 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ambt_13465 1b82bdd0e26141929cf4c217dd2d2be4 709 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ambt_13465 1b82bdd0e26141929cf4c217dd2d2be4 709 SUPERFAMILY SSF64518 110 456 8.11E-10 T 13-10-2018 ambt_13465 1b82bdd0e26141929cf4c217dd2d2be4 709 Pfam PF00460 Flagella basal body rod protein 10 36 1.2E-6 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ambt_13465 1b82bdd0e26141929cf4c217dd2d2be4 709 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 6 329 1.3E-51 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ambt_13035 3fb7904a7f339b6050003f0fc8fd96ac 540 Gene3D G3DSA:3.40.190.10 218 527 3.9E-158 T 13-10-2018 ambt_13035 3fb7904a7f339b6050003f0fc8fd96ac 540 Gene3D G3DSA:3.10.105.10 297 515 3.9E-158 T 13-10-2018 ambt_13035 3fb7904a7f339b6050003f0fc8fd96ac 540 PIRSF PIRSF002741 7 535 1.1E-99 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ambt_13035 3fb7904a7f339b6050003f0fc8fd96ac 540 Gene3D G3DSA:3.90.76.10 45 217 3.9E-158 T 13-10-2018 ambt_13035 3fb7904a7f339b6050003f0fc8fd96ac 540 SUPERFAMILY SSF53850 35 535 8.87E-134 T 13-10-2018 ambt_13035 3fb7904a7f339b6050003f0fc8fd96ac 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 456 6.9E-83 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 SUPERFAMILY SSF51735 54 299 1.36E-80 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 243 9.6E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 224 9.6E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 144 9.6E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 57 74 9.6E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 195 9.6E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 261 281 9.6E-36 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 Gene3D G3DSA:3.40.50.720 7 300 9.2E-89 T 13-10-2018 ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 65 298 5.6E-58 T 13-10-2018 ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 144 8.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 193 8.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 205 224 8.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_02960 f673f08e90b5a6ba2b61be90caad057b 300 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 192 220 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_13120 550cf8f236d035d0ca2e4424648f9cc9 545 Pfam PF00916 Sulfate permease family 9 364 6.5E-82 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ambt_13120 550cf8f236d035d0ca2e4424648f9cc9 545 Pfam PF01740 STAS domain 424 521 2.3E-10 T 13-10-2018 IPR002645 STAS domain ambt_13120 550cf8f236d035d0ca2e4424648f9cc9 545 SUPERFAMILY SSF52091 422 526 1.04E-12 T 13-10-2018 IPR036513 STAS domain superfamily ambt_13120 550cf8f236d035d0ca2e4424648f9cc9 545 Gene3D G3DSA:3.30.750.24 414 533 3.1E-17 T 13-10-2018 IPR036513 STAS domain superfamily ambt_14305 d09e39d94cf1cfd5a6150398b82dfd16 534 SUPERFAMILY SSF55073 366 511 6.36E-40 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_14305 d09e39d94cf1cfd5a6150398b82dfd16 534 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 358 512 5.8E-38 T 13-10-2018 IPR000160 GGDEF domain ambt_14305 d09e39d94cf1cfd5a6150398b82dfd16 534 SUPERFAMILY SSF55785 222 348 4.4E-9 T 13-10-2018 IPR035965 PAS domain superfamily ambt_14305 d09e39d94cf1cfd5a6150398b82dfd16 534 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 512 9.9E-39 T 13-10-2018 IPR000160 GGDEF domain ambt_14305 d09e39d94cf1cfd5a6150398b82dfd16 534 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 234 356 3.5E-8 T 13-10-2018 IPR000014 PAS domain ambt_14305 d09e39d94cf1cfd5a6150398b82dfd16 534 SMART SM00267 350 516 2.0E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_14305 d09e39d94cf1cfd5a6150398b82dfd16 534 Gene3D G3DSA:3.30.70.270 359 517 7.2E-45 T 13-10-2018 ambt_14305 d09e39d94cf1cfd5a6150398b82dfd16 534 Gene3D G3DSA:3.30.450.20 219 358 1.6E-9 T 13-10-2018 ambt_01345 a2b566a6073c4e4e677a3e9226f985c0 555 Pfam PF13432 Tetratricopeptide repeat 151 210 0.0075 T 13-10-2018 ambt_01345 a2b566a6073c4e4e677a3e9226f985c0 555 SUPERFAMILY SSF48452 21 220 6.32E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_01345 a2b566a6073c4e4e677a3e9226f985c0 555 Gene3D G3DSA:1.25.40.10 21 147 2.0E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_01345 a2b566a6073c4e4e677a3e9226f985c0 555 SMART SM00028 80 113 22.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_01345 a2b566a6073c4e4e677a3e9226f985c0 555 SMART SM00028 144 177 250.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_01345 a2b566a6073c4e4e677a3e9226f985c0 555 SMART SM00028 178 211 4.5E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_01345 a2b566a6073c4e4e677a3e9226f985c0 555 Gene3D G3DSA:1.25.40.10 148 289 1.8E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_19580 3afdb15e0fd269d0cfc268ebec160091 562 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 389 509 5.0E-33 T 13-10-2018 IPR025299 CstA, C-terminal domain ambt_19580 3afdb15e0fd269d0cfc268ebec160091 562 Pfam PF02554 Carbon starvation protein CstA 1 360 1.1E-115 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 ambt_06090 887fd978b6c970eda5673cf80529db8e 87 Pfam PF07498 Rho termination factor, N-terminal domain 58 84 5.5E-7 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ambt_20310 989da8936aa5fe5572d53679c7e41d08 259 Pfam PF08021 Siderophore-interacting FAD-binding domain 11 117 7.1E-26 T 13-10-2018 IPR013113 FAD-binding 9, siderophore-interacting ambt_20310 989da8936aa5fe5572d53679c7e41d08 259 SUPERFAMILY SSF63380 5 119 7.35E-12 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ambt_20310 989da8936aa5fe5572d53679c7e41d08 259 Gene3D G3DSA:2.40.30.10 1 117 1.8E-30 T 13-10-2018 ambt_20310 989da8936aa5fe5572d53679c7e41d08 259 Pfam PF04954 Siderophore-interacting protein 125 237 1.0E-31 T 13-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain ambt_20310 989da8936aa5fe5572d53679c7e41d08 259 Gene3D G3DSA:3.40.50.80 118 257 1.1E-42 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ambt_08290 08341628d03eac792cf3c95019756f74 211 Pfam PF11205 Protein of unknown function (DUF2987) 19 163 7.4E-44 T 13-10-2018 IPR021370 Protein of unknown function DUF2987 ambt_00295 8d48acbb213b850f9a1f03ef857d0f8d 342 PIRSF PIRSF039012 4 323 1.2E-87 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 ambt_00295 8d48acbb213b850f9a1f03ef857d0f8d 342 SUPERFAMILY SSF53187 20 316 1.72E-73 T 13-10-2018 ambt_00295 8d48acbb213b850f9a1f03ef857d0f8d 342 Gene3D G3DSA:3.40.630.10 18 318 4.7E-88 T 13-10-2018 ambt_00295 8d48acbb213b850f9a1f03ef857d0f8d 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 46 315 5.0E-59 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 ambt_12075 4e83dc86ceb9e127088c88a1ac01d054 262 Pfam PF16331 TolA binding protein trimerisation 40 111 9.4E-24 T 13-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 ambt_12075 4e83dc86ceb9e127088c88a1ac01d054 262 SMART SM00028 216 249 0.47 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12075 4e83dc86ceb9e127088c88a1ac01d054 262 SMART SM00028 179 212 35.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12075 4e83dc86ceb9e127088c88a1ac01d054 262 SUPERFAMILY SSF48452 150 250 3.8E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12075 4e83dc86ceb9e127088c88a1ac01d054 262 Pfam PF13432 Tetratricopeptide repeat 153 203 5.5E-7 T 13-10-2018 ambt_12075 4e83dc86ceb9e127088c88a1ac01d054 262 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 142 259 5.7E-42 T 13-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal ambt_12075 4e83dc86ceb9e127088c88a1ac01d054 262 Gene3D G3DSA:1.25.40.10 142 262 1.7E-30 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_12075 4e83dc86ceb9e127088c88a1ac01d054 262 Pfam PF13174 Tetratricopeptide repeat 217 249 5.1E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_12075 4e83dc86ceb9e127088c88a1ac01d054 262 Gene3D G3DSA:1.20.5.110 37 111 9.5E-22 T 13-10-2018 ambt_12075 4e83dc86ceb9e127088c88a1ac01d054 262 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 262 19.662 T 13-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 ambt_01260 2a5baa4c174d9054f84d976dfa26ff0e 402 Pfam PF00557 Metallopeptidase family M24 179 384 3.2E-55 T 13-10-2018 IPR000994 Peptidase M24 ambt_01260 2a5baa4c174d9054f84d976dfa26ff0e 402 SUPERFAMILY SSF53092 17 169 1.24E-23 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ambt_01260 2a5baa4c174d9054f84d976dfa26ff0e 402 Gene3D G3DSA:3.90.230.10 170 402 5.6E-72 T 13-10-2018 ambt_01260 2a5baa4c174d9054f84d976dfa26ff0e 402 SUPERFAMILY SSF55920 176 394 4.71E-67 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like ambt_01260 2a5baa4c174d9054f84d976dfa26ff0e 402 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 170 3.0E-16 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 ambt_01260 2a5baa4c174d9054f84d976dfa26ff0e 402 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 331 343 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ambt_01260 2a5baa4c174d9054f84d976dfa26ff0e 402 Gene3D G3DSA:3.40.350.10 1 169 1.8E-45 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ambt_01655 bfb767711807ffc34462bb62a8e923e8 322 Pfam PF03186 CobD/Cbib protein 16 289 7.1E-26 T 13-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 SUPERFAMILY SSF63411 39 247 6.23E-56 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 SUPERFAMILY SSF63411 503 708 3.83E-43 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 Gene3D G3DSA:3.30.830.10 265 463 3.3E-36 T 13-10-2018 ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 Pfam PF00675 Insulinase (Peptidase family M16) 51 172 6.9E-19 T 13-10-2018 IPR011765 Peptidase M16, N-terminal ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 Pfam PF00675 Insulinase (Peptidase family M16) 526 643 4.5E-11 T 13-10-2018 IPR011765 Peptidase M16, N-terminal ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 SUPERFAMILY SSF63411 272 456 3.19E-33 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 Gene3D G3DSA:3.30.830.10 726 922 2.9E-33 T 13-10-2018 ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 Pfam PF05193 Peptidase M16 inactive domain 672 848 7.7E-25 T 13-10-2018 IPR007863 Peptidase M16, C-terminal ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 Pfam PF05193 Peptidase M16 inactive domain 208 383 2.8E-26 T 13-10-2018 IPR007863 Peptidase M16, C-terminal ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 Gene3D G3DSA:3.30.830.10 510 716 3.3E-41 T 13-10-2018 ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 Gene3D G3DSA:3.30.830.10 35 259 1.8E-68 T 13-10-2018 ambt_12735 7ee12e8af1831ba88f874c56fb3a1404 945 SUPERFAMILY SSF63411 728 928 4.62E-36 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ambt_03070 acfbb4900de72ba8d8a4b5955291c205 255 Gene3D G3DSA:1.20.1050.10 137 252 8.8E-8 T 13-10-2018 ambt_03070 acfbb4900de72ba8d8a4b5955291c205 255 Pfam PF13410 Glutathione S-transferase, C-terminal domain 166 234 1.9E-9 T 13-10-2018 ambt_03070 acfbb4900de72ba8d8a4b5955291c205 255 Gene3D G3DSA:3.40.30.10 14 124 8.9E-13 T 13-10-2018 ambt_03070 acfbb4900de72ba8d8a4b5955291c205 255 SUPERFAMILY SSF52833 32 137 1.09E-16 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_03070 acfbb4900de72ba8d8a4b5955291c205 255 Pfam PF13417 Glutathione S-transferase, N-terminal domain 34 109 1.5E-10 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_03070 acfbb4900de72ba8d8a4b5955291c205 255 SUPERFAMILY SSF47616 118 240 8.95E-16 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_16195 97084a7b6dc8d22eee69db155238881a 292 SUPERFAMILY SSF53335 7 270 7.76E-74 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_16195 97084a7b6dc8d22eee69db155238881a 292 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 33 47 4.8E-19 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 ambt_16195 97084a7b6dc8d22eee69db155238881a 292 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 52 65 4.8E-19 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 ambt_16195 97084a7b6dc8d22eee69db155238881a 292 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 12 28 4.8E-19 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 ambt_16195 97084a7b6dc8d22eee69db155238881a 292 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 177 189 4.8E-19 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 ambt_16195 97084a7b6dc8d22eee69db155238881a 292 Gene3D G3DSA:1.10.1020.10 59 158 1.7E-84 T 13-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 ambt_16195 97084a7b6dc8d22eee69db155238881a 292 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ambt_16195 97084a7b6dc8d22eee69db155238881a 292 PIRSF PIRSF000398 3 276 4.3E-66 T 13-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 ambt_16195 97084a7b6dc8d22eee69db155238881a 292 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 12 252 7.9E-67 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 ambt_16195 97084a7b6dc8d22eee69db155238881a 292 TIGRFAM TIGR00571 dam: DNA adenine methylase 7 269 2.4E-91 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 ambt_16195 97084a7b6dc8d22eee69db155238881a 292 Gene3D G3DSA:3.40.50.150 9 241 1.7E-84 T 13-10-2018 ambt_03555 301e5284c2d0f2a84a4fbd1fe407900a 224 Pfam PF13614 AAA domain 103 223 1.1E-8 T 13-10-2018 IPR025669 AAA domain ambt_03555 301e5284c2d0f2a84a4fbd1fe407900a 224 Gene3D G3DSA:3.40.50.300 3 224 2.1E-36 T 13-10-2018 ambt_03555 301e5284c2d0f2a84a4fbd1fe407900a 224 SUPERFAMILY SSF52540 101 223 9.71E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_03715 16ac509c45193037f56a13c6025b3b71 728 Gene3D G3DSA:3.20.20.360 10 581 5.9E-256 T 13-10-2018 ambt_03715 16ac509c45193037f56a13c6025b3b71 728 Gene3D G3DSA:1.20.1220.12 585 727 2.5E-69 T 13-10-2018 ambt_03715 16ac509c45193037f56a13c6025b3b71 728 Pfam PF01274 Malate synthase 18 698 2.7E-157 T 13-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ambt_03715 16ac509c45193037f56a13c6025b3b71 728 Hamap MF_00641 Malate synthase G [glcB]. 1 728 360.081 T 13-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ambt_03715 16ac509c45193037f56a13c6025b3b71 728 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 723 0.0 T 13-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ambt_03715 16ac509c45193037f56a13c6025b3b71 728 SUPERFAMILY SSF51645 3 723 1.44E-279 T 13-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ambt_03715 16ac509c45193037f56a13c6025b3b71 728 Gene3D G3DSA:2.170.170.11 133 262 5.9E-256 T 13-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ambt_22185 f511143131cd7beb1b663758978ddc11 127 Pfam PF03899 ATP synthase I chain 17 110 3.6E-13 T 13-10-2018 IPR005598 ATP synthase protein I ambt_09155 9c21f6948a1628c6ace55493bc187284 72 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 1.1E-17 T 13-10-2018 IPR021249 Protein of unknown function DUF2788 ambt_07835 4736d65cd77fd23a705e77a14a6a567e 547 SUPERFAMILY SSF48452 173 482 1.74E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_07835 4736d65cd77fd23a705e77a14a6a567e 547 SMART SM00028 451 484 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_07835 4736d65cd77fd23a705e77a14a6a567e 547 SMART SM00028 231 264 37.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_07835 4736d65cd77fd23a705e77a14a6a567e 547 SMART SM00028 197 230 43.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_07835 4736d65cd77fd23a705e77a14a6a567e 547 SUPERFAMILY SSF52172 4 140 9.82E-25 T 13-10-2018 IPR011006 CheY-like superfamily ambt_07835 4736d65cd77fd23a705e77a14a6a567e 547 SMART SM00448 6 123 1.0E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_07835 4736d65cd77fd23a705e77a14a6a567e 547 Gene3D G3DSA:3.40.50.2300 2 132 2.6E-22 T 13-10-2018 ambt_07835 4736d65cd77fd23a705e77a14a6a567e 547 Pfam PF00072 Response regulator receiver domain 8 123 1.5E-16 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_07835 4736d65cd77fd23a705e77a14a6a567e 547 Gene3D G3DSA:1.25.40.10 133 521 3.9E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_18800 67dac4a7a160680918ba7347fef6988b 466 SUPERFAMILY SSF56672 26 227 1.51E-30 T 13-10-2018 ambt_18800 67dac4a7a160680918ba7347fef6988b 466 Pfam PF00817 impB/mucB/samB family 27 79 3.5E-5 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ambt_18485 47b1b855ae41e19b3daf4a478861defd 324 Pfam PF05128 Domain of unknown function (DUF697) 190 323 7.3E-22 T 13-10-2018 IPR021147 Protein of unknown function DUF697 ambt_13350 5d375749adb63dcdf194f1bab1ad145f 89 Gene3D G3DSA:1.10.1200.10 4 85 8.5E-7 T 13-10-2018 IPR036736 ACP-like superfamily ambt_13350 5d375749adb63dcdf194f1bab1ad145f 89 SUPERFAMILY SSF47336 21 67 2.09E-5 T 13-10-2018 IPR036736 ACP-like superfamily ambt_13350 5d375749adb63dcdf194f1bab1ad145f 89 Pfam PF00550 Phosphopantetheine attachment site 29 66 2.4E-5 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain ambt_13350 5d375749adb63dcdf194f1bab1ad145f 89 ProSitePatterns PS00012 Phosphopantetheine attachment site. 40 55 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site ambt_18930 d4cb2ca09c2d77c44632c66cb5421acd 417 Pfam PF00534 Glycosyl transferases group 1 241 396 3.4E-19 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_18930 d4cb2ca09c2d77c44632c66cb5421acd 417 Pfam PF13439 Glycosyltransferase Family 4 19 215 5.5E-18 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ambt_18930 d4cb2ca09c2d77c44632c66cb5421acd 417 Gene3D G3DSA:3.40.50.2000 232 399 3.0E-25 T 13-10-2018 ambt_18930 d4cb2ca09c2d77c44632c66cb5421acd 417 SUPERFAMILY SSF53756 5 416 9.87E-52 T 13-10-2018 ambt_00760 a66911600618b503da26cf3c31ce1252 303 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 55 302 3.2E-84 T 13-10-2018 IPR021254 Protein of unknown function DUF2806 ambt_00760 a66911600618b503da26cf3c31ce1252 303 Pfam PF10987 Protein of unknown function (DUF2806) 76 293 1.9E-72 T 13-10-2018 IPR021254 Protein of unknown function DUF2806 ambt_18740 e6c1cbd3f55d05ab8510de7acf02520a 247 Gene3D G3DSA:3.10.560.10 145 218 1.6E-15 T 13-10-2018 ambt_18740 e6c1cbd3f55d05ab8510de7acf02520a 247 Pfam PF06251 Capsule biosynthesis GfcC 21 244 2.0E-43 T 13-10-2018 IPR010425 Domain of unknown function DUF1017 ambt_14435 a247bece03d12bb4ea0269ce2121fcc1 391 Pfam PF13458 Periplasmic binding protein 28 368 2.5E-46 T 13-10-2018 IPR028081 Leucine-binding protein domain ambt_14435 a247bece03d12bb4ea0269ce2121fcc1 391 Gene3D G3DSA:3.40.50.2300 149 281 5.0E-64 T 13-10-2018 ambt_14435 a247bece03d12bb4ea0269ce2121fcc1 391 Gene3D G3DSA:3.40.50.2300 44 358 5.0E-64 T 13-10-2018 ambt_14435 a247bece03d12bb4ea0269ce2121fcc1 391 SUPERFAMILY SSF53822 27 384 5.21E-62 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_15835 21e0f65f451076b681d07d9a2d51b1a5 161 Gene3D G3DSA:2.60.40.1890 37 153 1.8E-35 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily ambt_15835 21e0f65f451076b681d07d9a2d51b1a5 161 SUPERFAMILY SSF110087 8 153 4.05E-43 T 13-10-2018 IPR036182 Copper chaperone PCuAC superfamily ambt_15835 21e0f65f451076b681d07d9a2d51b1a5 161 Pfam PF04314 Copper chaperone PCu(A)C 33 144 5.9E-34 T 13-10-2018 IPR007410 Copper chaperone PCuAC ambt_05985 8d991e4f0fa3c41df78d3767ff726ccc 311 Gene3D G3DSA:3.40.190.290 95 279 1.2E-22 T 13-10-2018 ambt_05985 8d991e4f0fa3c41df78d3767ff726ccc 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.4E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_05985 8d991e4f0fa3c41df78d3767ff726ccc 311 Gene3D G3DSA:1.10.10.10 2 87 2.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_05985 8d991e4f0fa3c41df78d3767ff726ccc 311 SUPERFAMILY SSF53850 94 291 9.05E-28 T 13-10-2018 ambt_05985 8d991e4f0fa3c41df78d3767ff726ccc 311 Pfam PF03466 LysR substrate binding domain 91 289 2.4E-25 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_05985 8d991e4f0fa3c41df78d3767ff726ccc 311 SUPERFAMILY SSF46785 5 89 2.18E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_13160 2c0ec56006c87628da701afc3b678c90 312 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.381 T 13-10-2018 IPR033752 MetA family ambt_13160 2c0ec56006c87628da701afc3b678c90 312 Gene3D G3DSA:3.40.50.880 1 301 2.0E-123 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_13160 2c0ec56006c87628da701afc3b678c90 312 SUPERFAMILY SSF52317 18 297 3.93E-97 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_13160 2c0ec56006c87628da701afc3b678c90 312 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 5.8E-134 T 13-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 ambt_13160 2c0ec56006c87628da701afc3b678c90 312 PIRSF PIRSF000450 1 309 1.0E-139 T 13-10-2018 IPR033752 MetA family ambt_13160 2c0ec56006c87628da701afc3b678c90 312 Pfam PF04204 Homoserine O-succinyltransferase 2 299 9.6E-132 T 13-10-2018 IPR033752 MetA family ambt_13160 2c0ec56006c87628da701afc3b678c90 312 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-111 T 13-10-2018 ambt_19965 129b608a3617c106c7b8ea1108eb31f0 358 SUPERFAMILY SSF111369 48 239 1.15E-13 T 13-10-2018 ambt_19965 129b608a3617c106c7b8ea1108eb31f0 358 Gene3D G3DSA:2.40.50.100 57 202 4.3E-43 T 13-10-2018 ambt_19965 129b608a3617c106c7b8ea1108eb31f0 358 Gene3D G3DSA:2.40.420.20 41 345 4.3E-43 T 13-10-2018 ambt_19965 129b608a3617c106c7b8ea1108eb31f0 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 256 7.2E-10 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_19965 129b608a3617c106c7b8ea1108eb31f0 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 346 3.7E-49 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_19965 129b608a3617c106c7b8ea1108eb31f0 358 Gene3D G3DSA:1.10.287.470 90 158 4.3E-43 T 13-10-2018 ambt_19965 129b608a3617c106c7b8ea1108eb31f0 358 Gene3D G3DSA:2.40.30.170 42 273 4.3E-43 T 13-10-2018 ambt_13900 b8bc675f95fe140baf5da279f4f361f5 147 Pfam PF03918 Cytochrome C biogenesis protein 7 133 3.5E-47 T 13-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family ambt_13900 b8bc675f95fe140baf5da279f4f361f5 147 Gene3D G3DSA:1.10.8.640 19 104 2.7E-34 T 13-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 288 8.0E-104 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 PIRSF PIRSF001365 1 294 4.2E-82 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 61.152 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 2.7E-93 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 SUPERFAMILY SSF51569 1 290 2.62E-92 T 13-10-2018 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 5.8E-32 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 5.8E-32 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 5.8E-32 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 5.8E-32 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 SMART SM01130 1 290 2.7E-126 T 13-10-2018 IPR002220 DapA-like GO:0016829 ambt_08845 fbe10d652769d8f167f366e36d4652f4 294 Gene3D G3DSA:3.20.20.70 1 292 1.7E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_21840 26df94a57d71392cc0e17d84d9bbbe6c 300 SUPERFAMILY SSF103481 188 285 1.83E-9 T 13-10-2018 ambt_21840 26df94a57d71392cc0e17d84d9bbbe6c 300 SUPERFAMILY SSF103481 36 138 3.01E-10 T 13-10-2018 ambt_21840 26df94a57d71392cc0e17d84d9bbbe6c 300 Pfam PF00892 EamA-like transporter family 151 283 2.7E-17 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_21840 26df94a57d71392cc0e17d84d9bbbe6c 300 Pfam PF00892 EamA-like transporter family 5 135 6.5E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_01355 8dfce376cfbf7ca0a8eecc1c429c7d83 115 Gene3D G3DSA:3.30.2310.20 2 108 4.0E-8 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ambt_01355 8dfce376cfbf7ca0a8eecc1c429c7d83 115 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 8 103 2.2E-5 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ambt_15195 1fb126fb87699c69a906d01e0224b63e 454 Gene3D G3DSA:1.10.10.10 393 452 5.8E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_15195 1fb126fb87699c69a906d01e0224b63e 454 Pfam PF08376 Nitrate and nitrite sensing 48 291 5.6E-44 T 13-10-2018 IPR013587 Nitrate/nitrite sensing protein ambt_15195 1fb126fb87699c69a906d01e0224b63e 454 SUPERFAMILY SSF52172 377 445 8.45E-13 T 13-10-2018 IPR011006 CheY-like superfamily ambt_15195 1fb126fb87699c69a906d01e0224b63e 454 SMART SM01012 390 445 6.0E-19 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 ambt_15195 1fb126fb87699c69a906d01e0224b63e 454 Pfam PF03861 ANTAR domain 393 445 3.5E-15 T 13-10-2018 IPR005561 ANTAR domain GO:0003723 ambt_12515 7dcb6cc8e7cc33f19917e79b270e48d0 189 Pfam PF14697 4Fe-4S dicluster domain 107 161 9.4E-18 T 13-10-2018 ambt_12515 7dcb6cc8e7cc33f19917e79b270e48d0 189 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 3 166 25.611 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 ambt_12515 7dcb6cc8e7cc33f19917e79b270e48d0 189 Gene3D G3DSA:1.10.15.40 37 81 6.1E-8 T 13-10-2018 ambt_12515 7dcb6cc8e7cc33f19917e79b270e48d0 189 SUPERFAMILY SSF54862 36 173 2.33E-31 T 13-10-2018 ambt_12515 7dcb6cc8e7cc33f19917e79b270e48d0 189 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 3 179 3.0E-87 T 13-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 ambt_12515 7dcb6cc8e7cc33f19917e79b270e48d0 189 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ambt_12515 7dcb6cc8e7cc33f19917e79b270e48d0 189 PIRSF PIRSF005784 2 187 3.0E-89 T 13-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 ambt_12515 7dcb6cc8e7cc33f19917e79b270e48d0 189 Gene3D G3DSA:3.30.70.20 82 177 8.5E-22 T 13-10-2018 ambt_12515 7dcb6cc8e7cc33f19917e79b270e48d0 189 Pfam PF04060 Putative Fe-S cluster 43 74 3.2E-14 T 13-10-2018 IPR007202 4Fe-4S domain GO:0051536 ambt_07745 e1233bc7db2868efed1e2e867f7fb10e 547 SUPERFAMILY SSF48452 236 490 7.6E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_07745 e1233bc7db2868efed1e2e867f7fb10e 547 SMART SM00448 3 119 3.0E-12 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_07745 e1233bc7db2868efed1e2e867f7fb10e 547 Gene3D G3DSA:3.40.50.2300 2 143 6.4E-19 T 13-10-2018 ambt_07745 e1233bc7db2868efed1e2e867f7fb10e 547 Pfam PF00072 Response regulator receiver domain 5 119 1.8E-11 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_07745 e1233bc7db2868efed1e2e867f7fb10e 547 SUPERFAMILY SSF52172 3 138 1.57E-20 T 13-10-2018 IPR011006 CheY-like superfamily ambt_21645 7e16d83bb3e2aeaf0d9b32e32d260a3f 239 SUPERFAMILY SSF53271 51 226 7.18E-16 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like ambt_21645 7e16d83bb3e2aeaf0d9b32e32d260a3f 239 Pfam PF00156 Phosphoribosyl transferase domain 173 219 3.7E-6 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ambt_21645 7e16d83bb3e2aeaf0d9b32e32d260a3f 239 Gene3D G3DSA:3.40.50.2020 113 233 9.9E-10 T 13-10-2018 ambt_19270 5389921b83bf16be0b0a6114660e656a 186 Pfam PF00072 Response regulator receiver domain 70 180 4.4E-18 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_19270 5389921b83bf16be0b0a6114660e656a 186 SUPERFAMILY SSF46955 3 54 3.3E-5 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily ambt_19270 5389921b83bf16be0b0a6114660e656a 186 SMART SM00448 68 180 3.1E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_19270 5389921b83bf16be0b0a6114660e656a 186 Pfam PF12728 Helix-turn-helix domain 4 54 3.1E-7 T 13-10-2018 ambt_19270 5389921b83bf16be0b0a6114660e656a 186 SUPERFAMILY SSF52172 68 183 5.83E-26 T 13-10-2018 IPR011006 CheY-like superfamily ambt_19270 5389921b83bf16be0b0a6114660e656a 186 Gene3D G3DSA:3.40.50.2300 60 186 1.3E-27 T 13-10-2018 ambt_19270 5389921b83bf16be0b0a6114660e656a 186 Gene3D G3DSA:1.10.1660.10 2 51 4.3E-5 T 13-10-2018 ambt_20485 138139b847f86c8c150c6db55768ef2b 251 Pfam PF11736 Protein of unknown function (DUF3299) 84 239 6.7E-41 T 13-10-2018 IPR021727 Protein of unknown function DUF3299 ambt_20485 138139b847f86c8c150c6db55768ef2b 251 Gene3D G3DSA:2.40.50.870 78 245 1.0E-34 T 13-10-2018 ambt_19345 359312326cae8c666f4ec456a2ed2d96 174 PIRSF PIRSF039093 1 174 6.2E-86 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ambt_19345 359312326cae8c666f4ec456a2ed2d96 174 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.2 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ambt_19345 359312326cae8c666f4ec456a2ed2d96 174 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 171 2.1E-85 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ambt_19345 359312326cae8c666f4ec456a2ed2d96 174 SUPERFAMILY SSF56235 2 172 2.85E-56 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_19345 359312326cae8c666f4ec456a2ed2d96 174 Pfam PF00227 Proteasome subunit 2 169 7.7E-22 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 ambt_19345 359312326cae8c666f4ec456a2ed2d96 174 Gene3D G3DSA:3.60.20.10 1 173 9.6E-66 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_13320 6efb6020f9730e5be83efff892361709 333 Gene3D G3DSA:3.40.50.720 5 311 1.3E-133 T 13-10-2018 ambt_13320 6efb6020f9730e5be83efff892361709 333 SUPERFAMILY SSF51735 1 260 5.61E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_13320 6efb6020f9730e5be83efff892361709 333 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 4.4E-103 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ambt_13320 6efb6020f9730e5be83efff892361709 333 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 326 2.1E-168 T 13-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 ambt_13320 6efb6020f9730e5be83efff892361709 333 Gene3D G3DSA:3.90.25.30 167 315 1.3E-133 T 13-10-2018 ambt_18500 906354c3fa2fc93fc109852b3c9e71da 263 Gene3D G3DSA:3.60.15.10 4 252 3.7E-31 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_18500 906354c3fa2fc93fc109852b3c9e71da 263 SUPERFAMILY SSF56281 17 236 1.7E-32 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_18500 906354c3fa2fc93fc109852b3c9e71da 263 SMART SM00849 20 219 2.1E-18 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_18500 906354c3fa2fc93fc109852b3c9e71da 263 Pfam PF00753 Metallo-beta-lactamase superfamily 20 219 4.7E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_12130 01fb5dae6dd293e7e9d23e2b94328500 146 Gene3D G3DSA:3.90.79.10 1 145 3.8E-38 T 13-10-2018 ambt_12130 01fb5dae6dd293e7e9d23e2b94328500 146 SUPERFAMILY SSF55811 3 141 2.17E-25 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ambt_12130 01fb5dae6dd293e7e9d23e2b94328500 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 19 40 6.3E-17 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 ambt_12130 01fb5dae6dd293e7e9d23e2b94328500 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 70 89 6.3E-17 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 ambt_12130 01fb5dae6dd293e7e9d23e2b94328500 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 125 138 6.3E-17 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 ambt_12130 01fb5dae6dd293e7e9d23e2b94328500 146 PRINTS PR01404 DATP pyrophosphohydrolase signature 98 119 6.3E-17 T 13-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 ambt_12130 01fb5dae6dd293e7e9d23e2b94328500 146 Pfam PF00293 NUDIX domain 5 135 2.8E-19 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ambt_12130 01fb5dae6dd293e7e9d23e2b94328500 146 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ambt_08405 8077786e21aa902ec6e186ae9574c5b6 414 Pfam PF13650 Aspartyl protease 62 160 1.4E-8 T 13-10-2018 ambt_08405 8077786e21aa902ec6e186ae9574c5b6 414 Pfam PF13650 Aspartyl protease 207 297 3.0E-6 T 13-10-2018 ambt_08405 8077786e21aa902ec6e186ae9574c5b6 414 SUPERFAMILY SSF50630 54 166 8.11E-7 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily ambt_08405 8077786e21aa902ec6e186ae9574c5b6 414 Gene3D G3DSA:2.40.70.10 187 318 1.9E-6 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily ambt_08405 8077786e21aa902ec6e186ae9574c5b6 414 Gene3D G3DSA:2.40.70.10 40 182 6.5E-14 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily ambt_11490 7d4252499b0f1dad1c5d3c53cb1653bd 630 SUPERFAMILY SSF56801 2 610 5.1E-156 T 13-10-2018 ambt_11490 7d4252499b0f1dad1c5d3c53cb1653bd 630 ProSitePatterns PS00455 Putative AMP-binding domain signature. 236 247 - T 13-10-2018 IPR020845 AMP-binding, conserved site ambt_11490 7d4252499b0f1dad1c5d3c53cb1653bd 630 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 588 4.8E-23 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ambt_11490 7d4252499b0f1dad1c5d3c53cb1653bd 630 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 3 56 4.6E-18 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 ambt_11490 7d4252499b0f1dad1c5d3c53cb1653bd 630 Gene3D G3DSA:3.30.300.30 496 625 1.1E-24 T 13-10-2018 ambt_11490 7d4252499b0f1dad1c5d3c53cb1653bd 630 Pfam PF00501 AMP-binding enzyme 64 500 1.0E-83 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ambt_11490 7d4252499b0f1dad1c5d3c53cb1653bd 630 Gene3D G3DSA:3.40.50.12780 31 493 2.3E-104 T 13-10-2018 ambt_21345 a748f3bc06c59a8a392bde623bc89981 240 SMART SM00862 157 233 5.6E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_21345 a748f3bc06c59a8a392bde623bc89981 240 Pfam PF00072 Response regulator receiver domain 8 117 2.6E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_21345 a748f3bc06c59a8a392bde623bc89981 240 SUPERFAMILY SSF46894 138 235 3.12E-26 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_21345 a748f3bc06c59a8a392bde623bc89981 240 SUPERFAMILY SSF52172 5 128 9.68E-42 T 13-10-2018 IPR011006 CheY-like superfamily ambt_21345 a748f3bc06c59a8a392bde623bc89981 240 SMART SM00448 6 117 2.1E-43 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_21345 a748f3bc06c59a8a392bde623bc89981 240 Gene3D G3DSA:3.40.50.2300 1 127 2.2E-39 T 13-10-2018 ambt_21345 a748f3bc06c59a8a392bde623bc89981 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 2.7E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_21345 a748f3bc06c59a8a392bde623bc89981 240 Gene3D G3DSA:1.10.10.10 131 240 6.7E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_05085 6cf9e0f7609d3c23b43eeb076aa211d0 507 Gene3D G3DSA:3.60.20.10 2 412 4.9E-155 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_05085 6cf9e0f7609d3c23b43eeb076aa211d0 507 Pfam PF00156 Phosphoribosyl transferase domain 281 392 1.4E-7 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ambt_05085 6cf9e0f7609d3c23b43eeb076aa211d0 507 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 1.6E-156 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ambt_05085 6cf9e0f7609d3c23b43eeb076aa211d0 507 SUPERFAMILY SSF56235 2 257 1.8E-70 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_05085 6cf9e0f7609d3c23b43eeb076aa211d0 507 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 44.754 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ambt_05085 6cf9e0f7609d3c23b43eeb076aa211d0 507 PIRSF PIRSF000485 1 480 2.2E-163 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ambt_05085 6cf9e0f7609d3c23b43eeb076aa211d0 507 SUPERFAMILY SSF53271 250 481 8.0E-69 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like ambt_05085 6cf9e0f7609d3c23b43eeb076aa211d0 507 Gene3D G3DSA:3.40.50.2020 277 441 4.9E-155 T 13-10-2018 ambt_05085 6cf9e0f7609d3c23b43eeb076aa211d0 507 Pfam PF13522 Glutamine amidotransferase domain 64 208 4.8E-17 T 13-10-2018 ambt_18795 80c1e2efafffbce6b1c2c814d4123910 237 SUPERFAMILY SSF52540 64 166 6.11E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_18795 80c1e2efafffbce6b1c2c814d4123910 237 Gene3D G3DSA:3.40.50.300 60 166 4.8E-29 T 13-10-2018 ambt_18795 80c1e2efafffbce6b1c2c814d4123910 237 Pfam PF00154 recA bacterial DNA recombination protein 39 137 7.8E-5 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ambt_14980 456b5079742361f19170ea5a4df9bf8f 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 111 2.7E-21 T 13-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ambt_14980 456b5079742361f19170ea5a4df9bf8f 117 Gene3D G3DSA:3.30.1130.10 1 117 3.4E-29 T 13-10-2018 ambt_14980 456b5079742361f19170ea5a4df9bf8f 117 Pfam PF02152 Dihydroneopterin aldolase 4 111 6.2E-26 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ambt_14980 456b5079742361f19170ea5a4df9bf8f 117 SMART SM00905 4 114 3.2E-27 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ambt_14980 456b5079742361f19170ea5a4df9bf8f 117 SUPERFAMILY SSF55620 1 112 3.22E-28 T 13-10-2018 ambt_14980 456b5079742361f19170ea5a4df9bf8f 117 TIGRFAM TIGR00526 folB_dom: FolB domain 2 116 1.2E-20 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ambt_15650 4847f3a615814c97894237aaabe566fd 73 SUPERFAMILY SSF47598 1 45 1.94E-7 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 ambt_15650 4847f3a615814c97894237aaabe566fd 73 Pfam PF05534 HicB family 3 33 3.2E-6 T 13-10-2018 IPR008651 Uncharacterised protein family HicB ambt_18590 413aa88b3fc93cffdd2c7a7e504718fa 82 Pfam PF11173 Protein of unknown function (DUF2960) 1 79 6.3E-35 T 13-10-2018 IPR021343 Protein of unknown function DUF2960 ambt_05710 afe98befa899bdd2ce2bdca3081e2a84 197 SUPERFAMILY SSF49384 25 169 5.86E-8 T 13-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 ambt_05710 afe98befa899bdd2ce2bdca3081e2a84 197 Gene3D G3DSA:2.60.40.680 15 173 6.9E-9 T 13-10-2018 ambt_00505 6f6af58457aa41968d58e7777ff0c1b2 284 Gene3D G3DSA:3.60.20.10 1 257 7.7E-94 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_00505 6f6af58457aa41968d58e7777ff0c1b2 284 Pfam PF13230 Glutamine amidotransferases class-II 2 265 1.7E-104 T 13-10-2018 IPR026869 Putative glutamine amidotransferase type 2 ambt_00505 6f6af58457aa41968d58e7777ff0c1b2 284 SUPERFAMILY SSF56235 2 251 1.29E-47 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_05530 e88ae71a0d821ac0b40eb0da1c8969f5 310 SUPERFAMILY SSF64182 4 306 7.06E-9 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily ambt_05530 e88ae71a0d821ac0b40eb0da1c8969f5 310 Gene3D G3DSA:3.10.310.30 257 306 1.1E-5 T 13-10-2018 ambt_05530 e88ae71a0d821ac0b40eb0da1c8969f5 310 PIRSF PIRSF028235 1 310 2.3E-157 T 13-10-2018 IPR016877 Uncharacterised conserved protein UCP028235 ambt_14310 2cc1f6a98964301fef847f1a8ad31b5e 211 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 210 6.3E-61 T 13-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 ambt_14310 2cc1f6a98964301fef847f1a8ad31b5e 211 Pfam PF03006 Haemolysin-III related 10 203 1.4E-35 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 ambt_01835 ae6a3fbf523e623297e2c3c9141aaed5 660 SUPERFAMILY SSF53822 267 657 8.41E-54 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_01835 ae6a3fbf523e623297e2c3c9141aaed5 660 Gene3D G3DSA:1.25.40.650 166 263 5.1E-7 T 13-10-2018 ambt_01835 ae6a3fbf523e623297e2c3c9141aaed5 660 Pfam PF04348 LppC putative lipoprotein 385 645 9.3E-45 T 13-10-2018 IPR007443 Penicillin-binding protein activator LpoA ambt_01835 ae6a3fbf523e623297e2c3c9141aaed5 660 Pfam PF04348 LppC putative lipoprotein 73 367 1.2E-28 T 13-10-2018 IPR007443 Penicillin-binding protein activator LpoA ambt_01835 ae6a3fbf523e623297e2c3c9141aaed5 660 Gene3D G3DSA:3.40.50.2300 467 656 2.0E-25 T 13-10-2018 ambt_19770 2bca4eedd1f080c455db641ba8c382ca 264 Gene3D G3DSA:3.40.390.10 77 179 1.4E-5 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 ambt_19770 2bca4eedd1f080c455db641ba8c382ca 264 SUPERFAMILY SSF55486 77 175 2.81E-8 T 13-10-2018 ambt_08990 212d6b207a0bd4f9fa54e9dab432b29d 278 SMART SM00382 25 183 9.7E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_08990 212d6b207a0bd4f9fa54e9dab432b29d 278 Gene3D G3DSA:3.40.50.300 6 207 1.7E-26 T 13-10-2018 ambt_08990 212d6b207a0bd4f9fa54e9dab432b29d 278 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 175 2.1E-11 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_08990 212d6b207a0bd4f9fa54e9dab432b29d 278 SUPERFAMILY SSF52540 10 271 9.91E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_08520 6cccb7b5cc586edf21551248e532d502 426 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ambt_08520 6cccb7b5cc586edf21551248e532d502 426 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 34.876 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ambt_08520 6cccb7b5cc586edf21551248e532d502 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 419 5.7E-154 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 ambt_08520 6cccb7b5cc586edf21551248e532d502 426 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 424 3.5E-146 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ambt_08520 6cccb7b5cc586edf21551248e532d502 426 SUPERFAMILY SSF55205 1 424 6.93E-142 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ambt_08520 6cccb7b5cc586edf21551248e532d502 426 Gene3D G3DSA:3.65.10.10 242 419 1.2E-155 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ambt_08520 6cccb7b5cc586edf21551248e532d502 426 Gene3D G3DSA:3.65.10.10 20 224 1.2E-155 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ambt_08520 6cccb7b5cc586edf21551248e532d502 426 PIRSF PIRSF000505 1 426 1.1E-156 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ambt_08520 6cccb7b5cc586edf21551248e532d502 426 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ambt_08795 c9aebd540cd463394fcc018f1e3102a3 363 SUPERFAMILY SSF52821 241 353 9.3E-22 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_08795 c9aebd540cd463394fcc018f1e3102a3 363 SUPERFAMILY SSF46626 127 222 6.35E-23 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_08795 c9aebd540cd463394fcc018f1e3102a3 363 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 134 206 1.1E-13 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_08795 c9aebd540cd463394fcc018f1e3102a3 363 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 33 112 3.9E-5 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_08795 c9aebd540cd463394fcc018f1e3102a3 363 SUPERFAMILY SSF46626 20 118 1.17E-10 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_08795 c9aebd540cd463394fcc018f1e3102a3 363 Pfam PF00581 Rhodanese-like domain 252 343 1.6E-8 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_08795 c9aebd540cd463394fcc018f1e3102a3 363 Gene3D G3DSA:1.10.760.10 18 118 5.3E-10 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_08795 c9aebd540cd463394fcc018f1e3102a3 363 Gene3D G3DSA:1.10.760.10 119 212 7.9E-22 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_08795 c9aebd540cd463394fcc018f1e3102a3 363 Gene3D G3DSA:3.40.250.10 250 363 6.6E-19 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily ambt_08795 c9aebd540cd463394fcc018f1e3102a3 363 SMART SM00450 249 347 1.6E-6 T 13-10-2018 IPR001763 Rhodanese-like domain ambt_15680 30c8d0438278a991ff19c4ed7563def2 162 SUPERFAMILY SSF55729 2 161 5.89E-37 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_15680 30c8d0438278a991ff19c4ed7563def2 162 Gene3D G3DSA:3.40.630.30 1 161 1.1E-37 T 13-10-2018 ambt_15680 30c8d0438278a991ff19c4ed7563def2 162 Pfam PF13302 Acetyltransferase (GNAT) domain 2 136 2.0E-22 T 13-10-2018 IPR000182 GNAT domain ambt_15185 a5109f40e0dd680c52de18a7a092af8f 521 SUPERFAMILY SSF52091 418 500 2.75E-14 T 13-10-2018 IPR036513 STAS domain superfamily ambt_15185 a5109f40e0dd680c52de18a7a092af8f 521 Gene3D G3DSA:3.30.750.24 409 501 3.4E-29 T 13-10-2018 IPR036513 STAS domain superfamily ambt_15185 a5109f40e0dd680c52de18a7a092af8f 521 Pfam PF01740 STAS domain 419 505 1.3E-10 T 13-10-2018 IPR002645 STAS domain ambt_15185 a5109f40e0dd680c52de18a7a092af8f 521 Pfam PF00916 Sulfate permease family 13 376 3.0E-54 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ambt_19620 fdc06b76dc10aa23164834cd6225d6c8 156 Gene3D G3DSA:1.10.455.10 2 155 1.4E-63 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily ambt_19620 fdc06b76dc10aa23164834cd6225d6c8 156 PIRSF PIRSF002122 3 156 2.5E-62 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 ambt_19620 fdc06b76dc10aa23164834cd6225d6c8 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.763 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ambt_19620 fdc06b76dc10aa23164834cd6225d6c8 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.9E-66 T 13-10-2018 IPR023798 Ribosomal protein S7 domain ambt_19620 fdc06b76dc10aa23164834cd6225d6c8 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.5E-69 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ambt_19620 fdc06b76dc10aa23164834cd6225d6c8 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19620 fdc06b76dc10aa23164834cd6225d6c8 156 SUPERFAMILY SSF47973 6 149 9.29E-60 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily ambt_13655 752241a3a646ab37670062e23f422b78 149 Gene3D G3DSA:3.10.129.10 5 146 8.4E-60 T 13-10-2018 ambt_13655 752241a3a646ab37670062e23f422b78 149 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 147 35.458 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ambt_13655 752241a3a646ab37670062e23f422b78 149 Pfam PF07977 FabA-like domain 17 139 7.2E-36 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ambt_13655 752241a3a646ab37670062e23f422b78 149 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 145 1.5E-58 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ambt_13655 752241a3a646ab37670062e23f422b78 149 SUPERFAMILY SSF54637 8 146 1.14E-48 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_07810 829a71650ffe6e8e1adadd072d777db3 153 Pfam PF06127 Protein of unknown function (DUF962) 1 148 6.6E-21 T 13-10-2018 IPR009305 Protein of unknown function DUF962 ambt_10020 03f0e622fa2660457400c307279024b2 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 126 178 5.6E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_10020 03f0e622fa2660457400c307279024b2 215 SUPERFAMILY SSF56784 1 213 7.37E-58 T 13-10-2018 IPR036412 HAD-like superfamily ambt_10020 03f0e622fa2660457400c307279024b2 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 8.7E-35 T 13-10-2018 ambt_10020 03f0e622fa2660457400c307279024b2 215 Gene3D G3DSA:1.10.150.240 18 84 6.9E-53 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ambt_10020 03f0e622fa2660457400c307279024b2 215 Gene3D G3DSA:3.40.50.1000 6 205 6.9E-53 T 13-10-2018 IPR023214 HAD superfamily ambt_10020 03f0e622fa2660457400c307279024b2 215 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 87 183 2.6E-12 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 ambt_08455 a5ec446ca926555c548e6b9de6686542 130 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 13 123 7.9E-23 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ambt_08455 a5ec446ca926555c548e6b9de6686542 130 TIGRFAM TIGR00494 crcB: protein CrcB 14 126 7.8E-29 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ambt_08455 a5ec446ca926555c548e6b9de6686542 130 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 11 129 17.13 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ambt_10735 890a61064fed963673e596dd5816f3c7 425 Pfam PF01425 Amidase 13 414 8.0E-63 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ambt_10735 890a61064fed963673e596dd5816f3c7 425 SUPERFAMILY SSF75304 40 423 9.68E-84 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ambt_10735 890a61064fed963673e596dd5816f3c7 425 Gene3D G3DSA:3.90.1300.10 15 425 2.2E-89 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ambt_10735 890a61064fed963673e596dd5816f3c7 425 ProSitePatterns PS00571 Amidases signature. 126 157 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 ambt_20880 286b5703cdf5b8007ec7a2f8a9e98e80 397 Pfam PF01734 Patatin-like phospholipase 86 273 3.1E-22 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ambt_20880 286b5703cdf5b8007ec7a2f8a9e98e80 397 SUPERFAMILY SSF52151 85 289 7.85E-33 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ambt_20880 286b5703cdf5b8007ec7a2f8a9e98e80 397 Gene3D G3DSA:3.40.1090.10 66 196 7.0E-17 T 13-10-2018 ambt_11195 baccbf56e4d696506c67ef2ab6223857 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 134 6.7E-29 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ambt_11195 baccbf56e4d696506c67ef2ab6223857 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 168 195 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ambt_11195 baccbf56e4d696506c67ef2ab6223857 333 SUPERFAMILY SSF51735 139 301 3.48E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_11195 baccbf56e4d696506c67ef2ab6223857 333 Gene3D G3DSA:3.90.180.10 11 331 1.6E-121 T 13-10-2018 ambt_11195 baccbf56e4d696506c67ef2ab6223857 333 Pfam PF00107 Zinc-binding dehydrogenase 175 296 1.6E-23 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ambt_11195 baccbf56e4d696506c67ef2ab6223857 333 SMART SM00829 12 331 1.4E-7 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ambt_11195 baccbf56e4d696506c67ef2ab6223857 333 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ambt_11195 baccbf56e4d696506c67ef2ab6223857 333 SUPERFAMILY SSF50129 4 159 1.5E-46 T 13-10-2018 IPR011032 GroES-like superfamily ambt_11195 baccbf56e4d696506c67ef2ab6223857 333 Gene3D G3DSA:3.40.50.720 149 303 1.6E-121 T 13-10-2018 ambt_13905 4419d0e69ab94d9d17372df23cf015ea 206 Pfam PF08534 Redoxin 37 173 1.5E-16 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ambt_13905 4419d0e69ab94d9d17372df23cf015ea 206 SUPERFAMILY SSF52833 42 188 1.3E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_13905 4419d0e69ab94d9d17372df23cf015ea 206 Gene3D G3DSA:3.40.30.10 23 195 7.4E-35 T 13-10-2018 ambt_13905 4419d0e69ab94d9d17372df23cf015ea 206 ProSitePatterns PS00194 Thioredoxin family active site. 67 85 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ambt_00460 89978a4d0facfdf6750e8eb7ca0b711e 210 PIRSF PIRSF006102 3 210 1.4E-68 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 ambt_00460 89978a4d0facfdf6750e8eb7ca0b711e 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 35.874 T 13-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 ambt_00460 89978a4d0facfdf6750e8eb7ca0b711e 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 195 1.9E-58 T 13-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 ambt_00460 89978a4d0facfdf6750e8eb7ca0b711e 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 5.8E-100 T 13-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 ambt_11955 08fcc567cf876cc988372a63a5772284 689 ProSitePatterns PS00438 Catalase proximal active site signature. 65 81 - T 13-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 Pfam PF00199 Catalase 29 413 2.5E-182 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 PIRSF PIRSF038927 2 689 0.0 T 13-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ambt_11955 08fcc567cf876cc988372a63a5772284 689 Gene3D G3DSA:2.40.180.10 3 439 6.8E-203 T 13-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ambt_11955 08fcc567cf876cc988372a63a5772284 689 SUPERFAMILY SSF52317 544 659 1.83E-15 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_11955 08fcc567cf876cc988372a63a5772284 689 SMART SM01060 29 417 1.7E-273 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 PRINTS PR00067 Catalase signature 105 123 1.9E-65 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 PRINTS PR00067 Catalase signature 126 143 1.9E-65 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 PRINTS PR00067 Catalase signature 145 163 1.9E-65 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 PRINTS PR00067 Catalase signature 42 65 1.9E-65 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 PRINTS PR00067 Catalase signature 346 372 1.9E-65 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 PRINTS PR00067 Catalase signature 314 341 1.9E-65 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 Pfam PF06628 Catalase-related immune-responsive 444 508 1.6E-20 T 13-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 Gene3D G3DSA:1.20.1370.20 442 544 6.7E-31 T 13-10-2018 ambt_11955 08fcc567cf876cc988372a63a5772284 689 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 359 367 - T 13-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 SUPERFAMILY SSF56634 20 510 4.71E-217 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_11955 08fcc567cf876cc988372a63a5772284 689 Gene3D G3DSA:3.40.50.880 545 689 4.3E-27 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_09475 d605457c88ce08fcb7ea0ca9c248620d 248 Gene3D G3DSA:3.20.20.70 1 248 2.0E-92 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_09475 d605457c88ce08fcb7ea0ca9c248620d 248 ProSitePatterns PS00171 Triosephosphate isomerase active site. 163 173 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_09475 d605457c88ce08fcb7ea0ca9c248620d 248 SUPERFAMILY SSF51351 6 246 8.51E-87 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_09475 d605457c88ce08fcb7ea0ca9c248620d 248 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 9 238 5.4E-60 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_09475 d605457c88ce08fcb7ea0ca9c248620d 248 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 6 246 58.232 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_09475 d605457c88ce08fcb7ea0ca9c248620d 248 Pfam PF00121 Triosephosphate isomerase 9 244 3.2E-85 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ambt_07815 eeed0ed0774104dca339e58c17c22314 385 Gene3D G3DSA:3.30.565.10 241 379 5.3E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_07815 eeed0ed0774104dca339e58c17c22314 385 SUPERFAMILY SSF55874 241 377 3.7E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_07815 eeed0ed0774104dca339e58c17c22314 385 Pfam PF06580 Histidine kinase 186 265 3.9E-25 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 ambt_07815 eeed0ed0774104dca339e58c17c22314 385 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 379 1.1E-5 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_16180 64b2b59be02201c2db46b4e5eb3d2487 355 Gene3D G3DSA:3.40.50.1970 1 170 2.2E-64 T 13-10-2018 ambt_16180 64b2b59be02201c2db46b4e5eb3d2487 355 Gene3D G3DSA:1.20.1090.10 171 355 1.3E-66 T 13-10-2018 ambt_16180 64b2b59be02201c2db46b4e5eb3d2487 355 SUPERFAMILY SSF56796 4 354 3.01E-114 T 13-10-2018 ambt_16180 64b2b59be02201c2db46b4e5eb3d2487 355 PIRSF PIRSF001455 5 354 2.4E-108 T 13-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ambt_16180 64b2b59be02201c2db46b4e5eb3d2487 355 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 71.204 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ambt_16180 64b2b59be02201c2db46b4e5eb3d2487 355 Pfam PF01761 3-dehydroquinate synthase 65 323 4.5E-108 T 13-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ambt_16180 64b2b59be02201c2db46b4e5eb3d2487 355 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 352 3.7E-118 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ambt_02975 d502b843876d326e8e2ea218cda1a3ed 88 Gene3D G3DSA:1.20.120.910 1 73 3.3E-21 T 13-10-2018 ambt_02975 d502b843876d326e8e2ea218cda1a3ed 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 69 6.8E-10 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 ambt_02975 d502b843876d326e8e2ea218cda1a3ed 88 SUPERFAMILY SSF57716 38 72 4.42E-6 T 13-10-2018 ambt_06045 6e042bf4d58cf4e1903d5a9595564159 559 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 13-10-2018 IPR020845 AMP-binding, conserved site ambt_06045 6e042bf4d58cf4e1903d5a9595564159 559 Pfam PF00501 AMP-binding enzyme 27 437 7.2E-86 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ambt_06045 6e042bf4d58cf4e1903d5a9595564159 559 Gene3D G3DSA:3.40.50.12780 17 433 3.7E-79 T 13-10-2018 ambt_06045 6e042bf4d58cf4e1903d5a9595564159 559 Gene3D G3DSA:3.30.300.30 438 544 2.7E-8 T 13-10-2018 ambt_06045 6e042bf4d58cf4e1903d5a9595564159 559 SUPERFAMILY SSF56801 17 542 1.01E-107 T 13-10-2018 ambt_13435 7557e959b515386646c11d31f50ecb77 279 PRINTS PR00207 Flagellin signature 111 134 1.2E-23 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13435 7557e959b515386646c11d31f50ecb77 279 PRINTS PR00207 Flagellin signature 37 54 1.2E-23 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13435 7557e959b515386646c11d31f50ecb77 279 PRINTS PR00207 Flagellin signature 76 95 1.2E-23 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13435 7557e959b515386646c11d31f50ecb77 279 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 3.6E-38 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ambt_13435 7557e959b515386646c11d31f50ecb77 279 Gene3D G3DSA:1.10.8.410 231 278 1.3E-22 T 13-10-2018 ambt_13435 7557e959b515386646c11d31f50ecb77 279 SUPERFAMILY SSF64518 1 278 1.7E-90 T 13-10-2018 ambt_13435 7557e959b515386646c11d31f50ecb77 279 Gene3D G3DSA:1.20.1330.10 50 230 1.9E-58 T 13-10-2018 ambt_13435 7557e959b515386646c11d31f50ecb77 279 Pfam PF00700 Bacterial flagellin C-terminal helical region 194 278 3.8E-26 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ambt_08205 25784390a6ffabd97a3b773063ffad73 543 Pfam PF01645 Conserved region in glutamate synthase 130 470 9.8E-88 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ambt_08205 25784390a6ffabd97a3b773063ffad73 543 Gene3D G3DSA:3.20.20.70 110 499 4.1E-108 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_08205 25784390a6ffabd97a3b773063ffad73 543 PIRSF PIRSF006429 7 529 1.2E-155 T 13-10-2018 IPR024188 Glutamate synthase large subunit-like protein ambt_08205 25784390a6ffabd97a3b773063ffad73 543 PIRSF PIRSF500060 8 526 1.4E-211 T 13-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria ambt_08205 25784390a6ffabd97a3b773063ffad73 543 SUPERFAMILY SSF51395 17 497 2.72E-131 T 13-10-2018 ambt_17400 0fc440b7c8be2522ea46788e05659e2a 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ambt_17400 0fc440b7c8be2522ea46788e05659e2a 446 Pfam PF07690 Major Facilitator Superfamily 13 347 2.8E-38 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_17400 0fc440b7c8be2522ea46788e05659e2a 446 SUPERFAMILY SSF103473 9 383 9.42E-54 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_17400 0fc440b7c8be2522ea46788e05659e2a 446 Gene3D G3DSA:1.20.1250.20 3 385 3.6E-69 T 13-10-2018 ambt_20500 3b1130ed5b5eaf6e248596a7fe50a041 203 Pfam PF10986 Protein of unknown function (DUF2796) 23 199 4.5E-43 T 13-10-2018 IPR021253 Protein of unknown function DUF2796 ambt_05100 9a072e58257cd39ef59c6ec6591e771f 262 Pfam PF04116 Fatty acid hydroxylase superfamily 85 216 5.0E-26 T 13-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 ambt_00110 d0a4ea3a2654add4555c5f67e1d06587 346 SUPERFAMILY SSF54106 24 72 1.96E-7 T 13-10-2018 ambt_00110 d0a4ea3a2654add4555c5f67e1d06587 346 SMART SM00257 25 73 1.0E-5 T 13-10-2018 IPR018392 LysM domain ambt_00110 d0a4ea3a2654add4555c5f67e1d06587 346 Gene3D G3DSA:3.10.350.10 24 71 2.0E-14 T 13-10-2018 IPR036779 LysM domain superfamily ambt_00110 d0a4ea3a2654add4555c5f67e1d06587 346 Pfam PF01476 LysM domain 26 72 6.9E-12 T 13-10-2018 IPR018392 LysM domain ambt_18880 9952fc3a482d8a169493d2222639a909 286 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 283 1.8E-94 T 13-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 ambt_18880 9952fc3a482d8a169493d2222639a909 286 Gene3D G3DSA:3.40.50.720 3 271 2.1E-97 T 13-10-2018 ambt_18880 9952fc3a482d8a169493d2222639a909 286 Gene3D G3DSA:3.90.25.10 157 278 2.1E-97 T 13-10-2018 ambt_18880 9952fc3a482d8a169493d2222639a909 286 Pfam PF04321 RmlD substrate binding domain 1 284 3.2E-94 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 ambt_18880 9952fc3a482d8a169493d2222639a909 286 SUPERFAMILY SSF51735 1 284 3.67E-90 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_19510 05734573f1cf45c9be8d5714b2876611 282 SUPERFAMILY SSF52374 1 280 4.02E-107 T 13-10-2018 ambt_19510 05734573f1cf45c9be8d5714b2876611 282 Pfam PF02569 Pantoate-beta-alanine ligase 2 278 4.1E-103 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ambt_19510 05734573f1cf45c9be8d5714b2876611 282 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 83 1.5E-9 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ambt_19510 05734573f1cf45c9be8d5714b2876611 282 Gene3D G3DSA:3.40.50.620 1 179 3.1E-79 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_19510 05734573f1cf45c9be8d5714b2876611 282 Gene3D G3DSA:3.30.1300.10 181 282 6.0E-29 T 13-10-2018 ambt_19510 05734573f1cf45c9be8d5714b2876611 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.082 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ambt_19510 05734573f1cf45c9be8d5714b2876611 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 9.2E-106 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ambt_12595 a9b2c13054b63ff30df84015d9f2d68f 218 Gene3D G3DSA:3.30.420.10 6 208 1.3E-53 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_12595 a9b2c13054b63ff30df84015d9f2d68f 218 TIGRFAM TIGR01298 RNaseT: ribonuclease T 9 206 5.8E-96 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 ambt_12595 a9b2c13054b63ff30df84015d9f2d68f 218 Pfam PF00929 Exonuclease 18 192 3.7E-37 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_12595 a9b2c13054b63ff30df84015d9f2d68f 218 SUPERFAMILY SSF53098 8 205 2.74E-57 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_12595 a9b2c13054b63ff30df84015d9f2d68f 218 Hamap MF_00157 Ribonuclease T [rnt]. 1 218 106.178 T 13-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 ambt_12595 a9b2c13054b63ff30df84015d9f2d68f 218 SMART SM00479 16 201 2.3E-29 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ambt_11255 25f16abebfda44ffca4fae7749eae86e 340 Gene3D G3DSA:3.90.550.10 3 256 1.1E-33 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_11255 25f16abebfda44ffca4fae7749eae86e 340 Pfam PF13632 Glycosyl transferase family group 2 189 311 1.3E-7 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_11255 25f16abebfda44ffca4fae7749eae86e 340 Pfam PF00535 Glycosyl transferase family 2 11 147 1.6E-9 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_11255 25f16abebfda44ffca4fae7749eae86e 340 SUPERFAMILY SSF53448 8 296 7.74E-37 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18375 faeebd8821f69fcf6ab3feff6def42e7 442 Gene3D G3DSA:3.90.1150.10 29 434 2.8E-146 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_18375 faeebd8821f69fcf6ab3feff6def42e7 442 Gene3D G3DSA:3.40.640.10 65 345 2.8E-146 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_18375 faeebd8821f69fcf6ab3feff6def42e7 442 Pfam PF00202 Aminotransferase class-III 31 439 1.4E-94 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ambt_18375 faeebd8821f69fcf6ab3feff6def42e7 442 SUPERFAMILY SSF53383 16 439 5.57E-115 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_18375 faeebd8821f69fcf6ab3feff6def42e7 442 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 288 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ambt_18375 faeebd8821f69fcf6ab3feff6def42e7 442 PIRSF PIRSF000521 31 441 4.8E-28 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ambt_03980 a2347de508bea3c847efabff8171f0cc 206 PIRSF PIRSF006170 1 205 1.3E-55 T 13-10-2018 IPR026039 Uncharacterised protein family UPF0070 ambt_03980 a2347de508bea3c847efabff8171f0cc 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 201 1.9E-57 T 13-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 ambt_03980 a2347de508bea3c847efabff8171f0cc 206 SUPERFAMILY SSF48452 89 204 9.59E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03980 a2347de508bea3c847efabff8171f0cc 206 Gene3D G3DSA:1.25.40.10 88 204 3.6E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_10465 6b88e705e3f6f044942b5305ee6d3d57 326 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 86 5.7E-25 T 13-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ambt_10465 6b88e705e3f6f044942b5305ee6d3d57 326 SUPERFAMILY SSF55681 91 326 3.46E-83 T 13-10-2018 ambt_10465 6b88e705e3f6f044942b5305ee6d3d57 326 SUPERFAMILY SSF46589 14 98 2.56E-21 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ambt_10465 6b88e705e3f6f044942b5305ee6d3d57 326 Pfam PF01409 tRNA synthetases class II core domain (F) 91 325 1.8E-105 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 ambt_10465 6b88e705e3f6f044942b5305ee6d3d57 326 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 37 325 9.3E-114 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ambt_10465 6b88e705e3f6f044942b5305ee6d3d57 326 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 325 48.578 T 13-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 ambt_10465 6b88e705e3f6f044942b5305ee6d3d57 326 Gene3D G3DSA:3.30.930.10 6 326 2.2E-125 T 13-10-2018 ambt_02945 1210d1a86800fcda9ff8c3a39d174d95 640 SUPERFAMILY SSF56300 153 537 1.49E-23 T 13-10-2018 ambt_02945 1210d1a86800fcda9ff8c3a39d174d95 640 Pfam PF00149 Calcineurin-like phosphoesterase 159 507 2.8E-10 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ambt_20000 467cea56f4e3474e8c94b948ca61cfde 526 Gene3D G3DSA:3.30.450.20 2 116 3.1E-23 T 13-10-2018 ambt_20000 467cea56f4e3474e8c94b948ca61cfde 526 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 111 9.0E-14 T 13-10-2018 IPR000014 PAS domain ambt_20000 467cea56f4e3474e8c94b948ca61cfde 526 Gene3D G3DSA:1.10.287.950 232 524 8.4E-61 T 13-10-2018 ambt_20000 467cea56f4e3474e8c94b948ca61cfde 526 Pfam PF08447 PAS fold 32 114 2.1E-16 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 ambt_20000 467cea56f4e3474e8c94b948ca61cfde 526 SMART SM00283 259 520 9.1E-59 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_20000 467cea56f4e3474e8c94b948ca61cfde 526 SUPERFAMILY SSF58104 265 521 1.7E-63 T 13-10-2018 ambt_20000 467cea56f4e3474e8c94b948ca61cfde 526 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 485 7.6E-41 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_20000 467cea56f4e3474e8c94b948ca61cfde 526 SUPERFAMILY SSF55785 21 114 2.97E-25 T 13-10-2018 IPR035965 PAS domain superfamily ambt_06855 2044f79ffebbe3d20559573fd5820aa5 192 PIRSF PIRSF033239 1 192 8.6E-52 T 13-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD ambt_06855 2044f79ffebbe3d20559573fd5820aa5 192 Pfam PF06055 Exopolysaccharide synthesis, ExoD 6 185 2.2E-53 T 13-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD ambt_19115 cb28aa5cb0c8333c7d20fdc05f4b41c4 104 SUPERFAMILY SSF50104 4 102 3.1E-36 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily ambt_19115 cb28aa5cb0c8333c7d20fdc05f4b41c4 104 SMART SM00739 4 31 1.3E-4 T 13-10-2018 IPR005824 KOW ambt_19115 cb28aa5cb0c8333c7d20fdc05f4b41c4 104 Gene3D G3DSA:2.30.30.30 2 104 1.5E-40 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 ambt_19115 cb28aa5cb0c8333c7d20fdc05f4b41c4 104 Pfam PF00467 KOW motif 8 38 1.3E-7 T 13-10-2018 IPR005824 KOW ambt_19115 cb28aa5cb0c8333c7d20fdc05f4b41c4 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 6.6E-41 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19115 cb28aa5cb0c8333c7d20fdc05f4b41c4 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 40 102 9.5E-26 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19115 cb28aa5cb0c8333c7d20fdc05f4b41c4 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19115 cb28aa5cb0c8333c7d20fdc05f4b41c4 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 21.574 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_05095 5fc82b1f2c13c88c28c1d179898a842b 252 PIRSF PIRSF020736 1 252 2.1E-86 T 13-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 ambt_05095 5fc82b1f2c13c88c28c1d179898a842b 252 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 6 248 3.4E-110 T 13-10-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 ambt_05095 5fc82b1f2c13c88c28c1d179898a842b 252 Gene3D G3DSA:1.20.1260.10 99 252 2.0E-53 T 13-10-2018 IPR012347 Ferritin-like ambt_05095 5fc82b1f2c13c88c28c1d179898a842b 252 Gene3D G3DSA:1.20.1260.10 3 72 4.9E-15 T 13-10-2018 IPR012347 Ferritin-like ambt_05095 5fc82b1f2c13c88c28c1d179898a842b 252 SUPERFAMILY SSF47240 7 251 3.43E-71 T 13-10-2018 IPR009078 Ferritin-like superfamily ambt_00915 8630a81e2988d8461feb0504d8012492 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 3.3E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_00915 8630a81e2988d8461feb0504d8012492 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 3.3E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_00915 8630a81e2988d8461feb0504d8012492 243 Gene3D G3DSA:1.20.120.530 83 216 1.2E-22 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_00915 8630a81e2988d8461feb0504d8012492 243 SUPERFAMILY SSF48008 84 215 1.83E-22 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ambt_00915 8630a81e2988d8461feb0504d8012492 243 Pfam PF07729 FCD domain 86 207 3.6E-21 T 13-10-2018 IPR011711 GntR, C-terminal ambt_00915 8630a81e2988d8461feb0504d8012492 243 SMART SM00895 86 208 5.5E-20 T 13-10-2018 IPR011711 GntR, C-terminal ambt_00915 8630a81e2988d8461feb0504d8012492 243 SUPERFAMILY SSF46785 3 73 9.0E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_00915 8630a81e2988d8461feb0504d8012492 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 69 4.0E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_00915 8630a81e2988d8461feb0504d8012492 243 Gene3D G3DSA:1.10.10.10 1 78 1.3E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_00915 8630a81e2988d8461feb0504d8012492 243 SMART SM00345 10 69 1.3E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ambt_20950 3f1b49552dd724d5610c7f83e0c26894 178 Pfam PF01464 Transglycosylase SLT domain 36 151 4.0E-6 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 ambt_20950 3f1b49552dd724d5610c7f83e0c26894 178 SUPERFAMILY SSF53955 33 152 7.17E-14 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily ambt_01935 f98c16f4e866615294b9d80e0d83b814 214 Pfam PF00072 Response regulator receiver domain 5 117 8.9E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01935 f98c16f4e866615294b9d80e0d83b814 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 2.2E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01935 f98c16f4e866615294b9d80e0d83b814 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 5.0E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01935 f98c16f4e866615294b9d80e0d83b814 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 5.0E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01935 f98c16f4e866615294b9d80e0d83b814 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 5.0E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01935 f98c16f4e866615294b9d80e0d83b814 214 Gene3D G3DSA:3.40.50.12740 3 213 6.9E-66 T 13-10-2018 ambt_01935 f98c16f4e866615294b9d80e0d83b814 214 SMART SM00448 3 116 2.1E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01935 f98c16f4e866615294b9d80e0d83b814 214 SUPERFAMILY SSF52172 1 134 1.11E-35 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01935 f98c16f4e866615294b9d80e0d83b814 214 SUPERFAMILY SSF46894 147 214 5.1E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_01935 f98c16f4e866615294b9d80e0d83b814 214 SMART SM00421 151 208 1.6E-23 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_12645 13d4f81cae4830a9ce495606756dd2f9 454 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 26 448 39.236 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 ambt_12645 13d4f81cae4830a9ce495606756dd2f9 454 Pfam PF04285 Protein of unknown function (DUF444) 29 445 2.4E-177 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 ambt_01420 fa54138c223747f3cade30846b554c68 141 Gene3D G3DSA:3.40.50.10110 1 139 7.5E-41 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily ambt_01420 fa54138c223747f3cade30846b554c68 141 SUPERFAMILY SSF102400 1 138 1.7E-36 T 13-10-2018 IPR036768 DNA polymerase III subunit chi superfamily ambt_01420 fa54138c223747f3cade30846b554c68 141 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 135 1.3E-33 T 13-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 ambt_11230 e7d0c9e9f2b14430d02d857ec31d8b51 205 SUPERFAMILY SSF50475 3 193 1.44E-46 T 13-10-2018 ambt_11230 e7d0c9e9f2b14430d02d857ec31d8b51 205 Pfam PF01613 Flavin reductase like domain 26 169 6.6E-21 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ambt_11230 e7d0c9e9f2b14430d02d857ec31d8b51 205 SMART SM00903 22 175 1.2E-10 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ambt_11230 e7d0c9e9f2b14430d02d857ec31d8b51 205 Gene3D G3DSA:2.30.110.10 8 205 5.1E-56 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ambt_01535 dd214ba73fd883b02f18e8eafe7ae93b 104 Pfam PF11449 Putative, 10TM heavy-metal exporter 1 102 2.5E-47 T 13-10-2018 IPR021552 Putative, 10TM heavy-metal exporter ambt_19350 036160be528883f4a49cbfcb03dd9c96 189 Gene3D G3DSA:3.30.70.1070 105 186 1.2E-28 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ambt_19350 036160be528883f4a49cbfcb03dd9c96 189 Pfam PF05036 Sporulation related domain 111 176 2.5E-16 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 ambt_19350 036160be528883f4a49cbfcb03dd9c96 189 SUPERFAMILY SSF110997 109 188 2.48E-21 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ambt_04840 f42b4b2f22a3a2f89be269b2c968caea 486 SUPERFAMILY SSF52151 144 472 8.37E-48 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ambt_04840 f42b4b2f22a3a2f89be269b2c968caea 486 Gene3D G3DSA:3.40.1090.10 231 421 1.2E-13 T 13-10-2018 ambt_04840 f42b4b2f22a3a2f89be269b2c968caea 486 Pfam PF11815 Domain of unknown function (DUF3336) 8 141 3.4E-29 T 13-10-2018 IPR021771 Triacylglycerol lipase GO:0004806|GO:0006629 ambt_04840 f42b4b2f22a3a2f89be269b2c968caea 486 Gene3D G3DSA:3.40.1090.20 145 230 1.0E-8 T 13-10-2018 ambt_04840 f42b4b2f22a3a2f89be269b2c968caea 486 Pfam PF01734 Patatin-like phospholipase 148 330 1.7E-25 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ambt_06710 ad3d1b63a41795a495a0845fe0ca4874 406 Pfam PF05987 Bacterial protein of unknown function (DUF898) 70 397 2.4E-99 T 13-10-2018 IPR010295 Protein of unknown function DUF898 ambt_20870 0fc8c8ff910519b368ba2189ceb0e8d1 424 Gene3D G3DSA:3.40.50.620 137 361 3.1E-26 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_20870 0fc8c8ff910519b368ba2189ceb0e8d1 424 SUPERFAMILY SSF52402 278 355 5.02E-5 T 13-10-2018 ambt_05545 7d161a1d607a5e101bd0c336cfa0e1c9 906 Gene3D G3DSA:3.40.630.10 57 350 7.6E-33 T 13-10-2018 ambt_05545 7d161a1d607a5e101bd0c336cfa0e1c9 906 SUPERFAMILY SSF53187 56 349 3.64E-48 T 13-10-2018 ambt_05545 7d161a1d607a5e101bd0c336cfa0e1c9 906 SUPERFAMILY SSF52317 666 883 2.75E-11 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_05545 7d161a1d607a5e101bd0c336cfa0e1c9 906 Gene3D G3DSA:3.40.50.880 642 889 4.6E-5 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_05545 7d161a1d607a5e101bd0c336cfa0e1c9 906 Pfam PF00246 Zinc carboxypeptidase 69 243 2.6E-16 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_10110 c82d6858288df765a67f330cce17880f 328 Gene3D G3DSA:3.20.20.140 1 327 8.4E-90 T 13-10-2018 ambt_10110 c82d6858288df765a67f330cce17880f 328 Hamap MF_01962 Adenine deaminase. 1 309 63.934 T 13-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 ambt_10110 c82d6858288df765a67f330cce17880f 328 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 2 319 2.0E-105 T 13-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 ambt_10110 c82d6858288df765a67f330cce17880f 328 Pfam PF00962 Adenosine/AMP deaminase 1 317 1.2E-58 T 13-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 ambt_10110 c82d6858288df765a67f330cce17880f 328 SUPERFAMILY SSF51556 1 324 3.97E-71 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_00155 43678278fc1f5a1cac6e090759ba8047 178 Gene3D G3DSA:2.160.10.10 1 178 1.4E-53 T 13-10-2018 ambt_00155 43678278fc1f5a1cac6e090759ba8047 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 95 128 2.7E-6 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_00155 43678278fc1f5a1cac6e090759ba8047 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 39 2.1E-5 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_00155 43678278fc1f5a1cac6e090759ba8047 178 SUPERFAMILY SSF51161 4 175 8.46E-44 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_11635 cdb76983a8470ac1bcaf4f1d7465cd4f 206 SUPERFAMILY SSF55821 1 203 1.01E-61 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ambt_11635 cdb76983a8470ac1bcaf4f1d7465cd4f 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 7.0E-69 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 ambt_11635 cdb76983a8470ac1bcaf4f1d7465cd4f 206 Pfam PF01300 Telomere recombination 22 198 5.6E-45 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 ambt_11635 cdb76983a8470ac1bcaf4f1d7465cd4f 206 Gene3D G3DSA:3.90.870.10 1 205 1.8E-64 T 13-10-2018 ambt_12900 71b187fc1e8f13ab11e4224760e10250 142 SUPERFAMILY SSF54637 3 118 5.48E-23 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_12900 71b187fc1e8f13ab11e4224760e10250 142 Gene3D G3DSA:3.10.129.10 1 132 7.8E-21 T 13-10-2018 ambt_12900 71b187fc1e8f13ab11e4224760e10250 142 Pfam PF03061 Thioesterase superfamily 19 92 4.7E-11 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ambt_00290 1a82088035cf3883fb69ed6ad928e6c0 150 Gene3D G3DSA:2.40.70.10 9 139 2.2E-32 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily ambt_00290 1a82088035cf3883fb69ed6ad928e6c0 150 Pfam PF05618 Putative ATP-dependant zinc protease 12 145 3.6E-31 T 13-10-2018 ambt_00290 1a82088035cf3883fb69ed6ad928e6c0 150 SUPERFAMILY SSF50630 12 146 4.5E-40 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily ambt_09170 ef5087158ad1707e5733920ea3f2f43d 141 Pfam PF01475 Ferric uptake regulator family 9 129 1.5E-47 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ambt_09170 ef5087158ad1707e5733920ea3f2f43d 141 Gene3D G3DSA:1.10.10.10 1 83 3.5E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_09170 ef5087158ad1707e5733920ea3f2f43d 141 Gene3D G3DSA:3.30.1490.190 84 140 2.5E-23 T 13-10-2018 ambt_09170 ef5087158ad1707e5733920ea3f2f43d 141 SUPERFAMILY SSF46785 3 133 6.28E-43 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_05235 af6a02c59a6606e38b8b287ddc96007b 198 Gene3D G3DSA:2.70.40.10 1 162 1.7E-51 T 13-10-2018 IPR036157 dUTPase-like superfamily ambt_05235 af6a02c59a6606e38b8b287ddc96007b 198 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 33.762 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 ambt_05235 af6a02c59a6606e38b8b287ddc96007b 198 SUPERFAMILY SSF51283 1 191 2.49E-58 T 13-10-2018 IPR036157 dUTPase-like superfamily ambt_05235 af6a02c59a6606e38b8b287ddc96007b 198 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 1.3E-67 T 13-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 ambt_05235 af6a02c59a6606e38b8b287ddc96007b 198 Pfam PF00692 dUTPase 78 185 1.0E-8 T 13-10-2018 IPR029054 dUTPase-like ambt_07055 c8e2d7bfa1746c8b6dece0066a32f55b 656 Pfam PF13432 Tetratricopeptide repeat 250 310 2.5E-7 T 13-10-2018 ambt_07055 c8e2d7bfa1746c8b6dece0066a32f55b 656 Gene3D G3DSA:3.40.50.300 406 651 2.7E-59 T 13-10-2018 ambt_07055 c8e2d7bfa1746c8b6dece0066a32f55b 656 Gene3D G3DSA:1.25.40.10 6 138 4.5E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_07055 c8e2d7bfa1746c8b6dece0066a32f55b 656 SUPERFAMILY SSF48452 20 321 1.26E-27 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_07055 c8e2d7bfa1746c8b6dece0066a32f55b 656 Gene3D G3DSA:1.25.40.10 145 405 8.4E-30 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_07055 c8e2d7bfa1746c8b6dece0066a32f55b 656 Pfam PF13469 Sulfotransferase family 417 602 1.2E-42 T 13-10-2018 ambt_07055 c8e2d7bfa1746c8b6dece0066a32f55b 656 SUPERFAMILY SSF52540 415 638 1.18E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_07055 c8e2d7bfa1746c8b6dece0066a32f55b 656 SMART SM00028 278 311 5.3E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_07055 c8e2d7bfa1746c8b6dece0066a32f55b 656 SMART SM00028 42 75 13.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_07055 c8e2d7bfa1746c8b6dece0066a32f55b 656 SMART SM00028 76 109 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_07055 c8e2d7bfa1746c8b6dece0066a32f55b 656 SMART SM00028 176 209 170.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_15130 3fa16a4991681fe4acb0d8f91d4bef54 288 SMART SM00382 34 216 1.8E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_15130 3fa16a4991681fe4acb0d8f91d4bef54 288 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_15130 3fa16a4991681fe4acb0d8f91d4bef54 288 SUPERFAMILY SSF52540 6 235 8.3E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15130 3fa16a4991681fe4acb0d8f91d4bef54 288 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 25 254 9.2E-106 T 13-10-2018 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 ambt_15130 3fa16a4991681fe4acb0d8f91d4bef54 288 Gene3D G3DSA:3.40.50.300 3 275 7.7E-63 T 13-10-2018 ambt_15130 3fa16a4991681fe4acb0d8f91d4bef54 288 Pfam PF00005 ABC transporter 25 166 6.5E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_11380 1e94d226590fbcc6a1befac171e3ec47 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 52 2.0E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_11380 1e94d226590fbcc6a1befac171e3ec47 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 3.4E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_11380 1e94d226590fbcc6a1befac171e3ec47 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 3.4E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_11380 1e94d226590fbcc6a1befac171e3ec47 193 SUPERFAMILY SSF48498 75 187 5.19E-12 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ambt_11380 1e94d226590fbcc6a1befac171e3ec47 193 Gene3D G3DSA:1.10.357.10 3 190 4.1E-33 T 13-10-2018 ambt_11380 1e94d226590fbcc6a1befac171e3ec47 193 SUPERFAMILY SSF46689 6 71 1.18E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_11015 051a9cf6407f8efdd66ada172820a95a 137 PIRSF PIRSF008459 10 136 3.3E-37 T 13-10-2018 IPR016540 Uncharacterised conserved protein UCP008459 ambt_11015 051a9cf6407f8efdd66ada172820a95a 137 SUPERFAMILY SSF55021 9 62 1.28E-12 T 13-10-2018 ambt_11015 051a9cf6407f8efdd66ada172820a95a 137 Pfam PF13840 ACT domain 66 128 3.2E-16 T 13-10-2018 IPR027795 CASTOR, ACT domain ambt_11015 051a9cf6407f8efdd66ada172820a95a 137 Gene3D G3DSA:3.30.2130.10 9 137 2.3E-36 T 13-10-2018 ambt_11015 051a9cf6407f8efdd66ada172820a95a 137 SUPERFAMILY SSF55021 69 130 5.5E-16 T 13-10-2018 ambt_00530 00f864d4f6055680a2414ff576ac05a0 578 Gene3D G3DSA:2.30.40.10 57 553 3.8E-137 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_00530 00f864d4f6055680a2414ff576ac05a0 578 Gene3D G3DSA:3.10.310.70 127 244 3.8E-137 T 13-10-2018 ambt_00530 00f864d4f6055680a2414ff576ac05a0 578 Pfam PF07969 Amidohydrolase family 98 576 1.3E-97 T 13-10-2018 IPR013108 Amidohydrolase 3 ambt_00530 00f864d4f6055680a2414ff576ac05a0 578 SUPERFAMILY SSF51556 108 536 2.55E-38 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_00530 00f864d4f6055680a2414ff576ac05a0 578 Gene3D G3DSA:3.20.20.140 109 535 3.8E-137 T 13-10-2018 ambt_00530 00f864d4f6055680a2414ff576ac05a0 578 SUPERFAMILY SSF51338 41 577 2.8E-13 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_04980 3ab37836fcb2ebd741ef6af043a043c1 159 Pfam PF03061 Thioesterase superfamily 28 96 2.5E-6 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ambt_04980 3ab37836fcb2ebd741ef6af043a043c1 159 Gene3D G3DSA:3.10.129.10 10 143 9.0E-27 T 13-10-2018 ambt_04980 3ab37836fcb2ebd741ef6af043a043c1 159 SUPERFAMILY SSF54637 10 149 2.55E-30 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_19525 0e82c21047f07916488df01bfea3ebd8 226 Pfam PF02390 Putative methyltransferase 58 214 2.9E-13 T 13-10-2018 ambt_19525 0e82c21047f07916488df01bfea3ebd8 226 SUPERFAMILY SSF53335 34 116 6.12E-14 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_19525 0e82c21047f07916488df01bfea3ebd8 226 Gene3D G3DSA:3.40.50.150 16 217 5.4E-30 T 13-10-2018 ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 SUPERFAMILY SSF51735 3 242 2.96E-72 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.1E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.1E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.1E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.1E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.1E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 Gene3D G3DSA:3.40.50.720 1 243 4.5E-75 T 13-10-2018 ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 3.2E-57 T 13-10-2018 ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 8.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_06140 35c127727c9e5c30c2d4cb0edcb11108 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.6E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_17340 aa8b2623a039ee5176500164b446104f 415 SMART SM00448 294 408 1.7E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_17340 aa8b2623a039ee5176500164b446104f 415 Pfam PF00072 Response regulator receiver domain 296 403 6.3E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_17340 aa8b2623a039ee5176500164b446104f 415 Gene3D G3DSA:3.40.50.2300 289 415 1.1E-28 T 13-10-2018 ambt_17340 aa8b2623a039ee5176500164b446104f 415 SUPERFAMILY SSF52172 295 412 3.98E-27 T 13-10-2018 IPR011006 CheY-like superfamily ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SUPERFAMILY SSF50249 2 112 2.45E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Pfam PF00575 S1 RNA binding domain 275 347 4.6E-20 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Pfam PF00575 S1 RNA binding domain 449 520 3.1E-11 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Pfam PF00575 S1 RNA binding domain 108 171 5.3E-8 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Pfam PF00575 S1 RNA binding domain 190 260 4.9E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Pfam PF00575 S1 RNA binding domain 361 434 2.1E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Pfam PF00575 S1 RNA binding domain 19 86 5.0E-7 T 13-10-2018 IPR003029 S1 domain GO:0003676 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SUPERFAMILY SSF50249 255 364 6.79E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SUPERFAMILY SSF50249 189 277 1.12E-26 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Gene3D G3DSA:2.40.50.140 187 268 4.0E-28 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 5.5E-96 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 5.5E-96 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 5.5E-96 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 5.5E-96 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 5.5E-96 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 5.5E-96 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 5.5E-96 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 5.5E-96 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 5.5E-96 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SMART SM00316 19 87 5.2E-5 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SMART SM00316 449 520 5.0E-16 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SMART SM00316 103 171 0.0012 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SMART SM00316 190 260 2.3E-27 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SMART SM00316 362 434 2.7E-22 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SMART SM00316 275 347 1.1E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SUPERFAMILY SSF50249 107 184 9.93E-13 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SUPERFAMILY SSF50249 429 534 1.94E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Gene3D G3DSA:2.40.50.140 358 443 6.7E-26 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Gene3D G3DSA:2.40.50.140 98 181 4.1E-5 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Gene3D G3DSA:2.40.50.140 269 357 1.5E-30 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 6.1E-226 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Gene3D G3DSA:2.40.50.140 444 528 9.1E-18 T 13-10-2018 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 PIRSF PIRSF002111 1 534 4.8E-219 T 13-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 SUPERFAMILY SSF50249 342 440 8.21E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_08510 db08fe1e8ee65774abcd9050f7e14ebf 556 Gene3D G3DSA:2.40.50.140 6 97 1.4E-17 T 13-10-2018 ambt_00670 68fc588a94a5709e2e2949b14a69bbe0 297 SMART SM00563 89 231 1.0E-13 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_00670 68fc588a94a5709e2e2949b14a69bbe0 297 SUPERFAMILY SSF69593 32 291 3.01E-29 T 13-10-2018 ambt_00670 68fc588a94a5709e2e2949b14a69bbe0 297 Pfam PF01553 Acyltransferase 79 224 2.1E-13 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ambt_09785 ff2acd2739342ee8e5e7e0febbe2c357 157 SUPERFAMILY SSF52833 3 71 1.08E-22 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_09785 ff2acd2739342ee8e5e7e0febbe2c357 157 Gene3D G3DSA:3.40.30.10 1 68 7.0E-47 T 13-10-2018 ambt_09785 ff2acd2739342ee8e5e7e0febbe2c357 157 SUPERFAMILY SSF47616 65 155 4.04E-14 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_09785 ff2acd2739342ee8e5e7e0febbe2c357 157 Pfam PF14497 Glutathione S-transferase, C-terminal domain 107 156 2.0E-7 T 13-10-2018 IPR004046 Glutathione S-transferase, C-terminal ambt_09785 ff2acd2739342ee8e5e7e0febbe2c357 157 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 60 4.4E-15 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_09785 ff2acd2739342ee8e5e7e0febbe2c357 157 Gene3D G3DSA:1.20.1050.10 69 156 7.0E-47 T 13-10-2018 ambt_07255 174a16a0f76b506bc930195a03b4b732 735 Pfam PF07693 KAP family P-loop domain 24 323 1.5E-37 T 13-10-2018 IPR011646 KAP family P-loop domain ambt_07255 174a16a0f76b506bc930195a03b4b732 735 SUPERFAMILY SSF52540 39 236 7.02E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_20715 78e721fac99a11fb26b4fb8d84cfba6c 276 SUPERFAMILY SSF48452 135 225 2.95E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_20715 78e721fac99a11fb26b4fb8d84cfba6c 276 Gene3D G3DSA:1.25.40.10 95 262 2.4E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_06480 8f24e6d8a05facb16fbea6b03fa8abf4 90 Gene3D G3DSA:3.10.20.30 1 90 4.1E-19 T 13-10-2018 IPR012675 Beta-grasp domain superfamily ambt_06480 8f24e6d8a05facb16fbea6b03fa8abf4 90 Pfam PF02597 ThiS family 5 90 1.3E-14 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 ambt_06480 8f24e6d8a05facb16fbea6b03fa8abf4 90 SUPERFAMILY SSF54285 1 88 2.24E-18 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ambt_02705 751b96624dde4997d923cb5b845b78e0 109 Gene3D G3DSA:1.20.1270.360 3 109 3.7E-33 T 13-10-2018 ambt_02705 751b96624dde4997d923cb5b845b78e0 109 Pfam PF03860 Domain of Unknown Function (DUF326) 66 85 1.9E-5 T 13-10-2018 IPR005560 Protein of unknown function DUF326 ambt_22210 5aa1c4161df1662d6e0aee4c50930070 273 SUPERFAMILY SSF52540 63 228 5.77E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_22210 5aa1c4161df1662d6e0aee4c50930070 273 Gene3D G3DSA:3.40.50.300 46 239 4.2E-23 T 13-10-2018 ambt_22210 5aa1c4161df1662d6e0aee4c50930070 273 Pfam PF01695 IstB-like ATP binding protein 106 227 8.1E-11 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ambt_17950 2690af74848cc65d8429a4e69955eef4 287 Gene3D G3DSA:3.90.850.10 58 287 7.5E-62 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_17950 2690af74848cc65d8429a4e69955eef4 287 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 67 284 3.8E-49 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ambt_17950 2690af74848cc65d8429a4e69955eef4 287 SUPERFAMILY SSF56529 56 285 9.03E-54 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_19075 b129c5d22ca903930962e17a9e790c34 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 2.5E-46 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19075 b129c5d22ca903930962e17a9e790c34 144 SUPERFAMILY SSF52080 4 143 2.49E-45 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily ambt_19075 b129c5d22ca903930962e17a9e790c34 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 18.941 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 ambt_19075 b129c5d22ca903930962e17a9e790c34 144 Gene3D G3DSA:3.100.10.10 69 144 2.0E-14 T 13-10-2018 ambt_19075 b129c5d22ca903930962e17a9e790c34 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.5E-30 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P ambt_03245 1d9fc60d669475d63489910cb66eb8f2 442 Gene3D G3DSA:3.90.230.10 186 434 2.3E-14 T 13-10-2018 ambt_03245 1d9fc60d669475d63489910cb66eb8f2 442 SUPERFAMILY SSF55920 212 406 3.93E-14 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like ambt_03245 1d9fc60d669475d63489910cb66eb8f2 442 Pfam PF00557 Metallopeptidase family M24 213 410 8.6E-10 T 13-10-2018 IPR000994 Peptidase M24 ambt_16535 45e6a1088ec0046760ea7a738d9928eb 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 34.498 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_16535 45e6a1088ec0046760ea7a738d9928eb 201 Gene3D G3DSA:3.40.1370.10 2 201 2.4E-71 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 ambt_16535 45e6a1088ec0046760ea7a738d9928eb 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 1.9E-65 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 ambt_16535 45e6a1088ec0046760ea7a738d9928eb 201 SUPERFAMILY SSF52166 10 200 1.3E-73 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 ambt_16535 45e6a1088ec0046760ea7a738d9928eb 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 7.1E-76 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 Gene3D G3DSA:2.40.180.10 2 488 1.1E-207 T 13-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 Pfam PF06628 Catalase-related immune-responsive 418 478 2.2E-17 T 13-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 PIRSF PIRSF038928 1 485 8.5E-210 T 13-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 PRINTS PR00067 Catalase signature 321 347 7.0E-67 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 PRINTS PR00067 Catalase signature 105 122 7.0E-67 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 PRINTS PR00067 Catalase signature 84 102 7.0E-67 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 PRINTS PR00067 Catalase signature 21 44 7.0E-67 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 PRINTS PR00067 Catalase signature 124 142 7.0E-67 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 PRINTS PR00067 Catalase signature 289 316 7.0E-67 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 SUPERFAMILY SSF56634 4 480 5.1E-196 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 13-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 SMART SM01060 8 395 7.6E-266 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_05475 a77dbf8b1b2d246e93524a5e86ef8c55 500 Pfam PF00199 Catalase 8 391 1.6E-179 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ambt_09665 75800e792061591e1eccd6f53f5cfe58 72 Gene3D G3DSA:2.40.50.140 2 65 5.5E-28 T 13-10-2018 ambt_09665 75800e792061591e1eccd6f53f5cfe58 72 PRINTS PR00050 Cold shock protein signature 4 19 1.2E-15 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_09665 75800e792061591e1eccd6f53f5cfe58 72 PRINTS PR00050 Cold shock protein signature 25 34 1.2E-15 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_09665 75800e792061591e1eccd6f53f5cfe58 72 PRINTS PR00050 Cold shock protein signature 40 58 1.2E-15 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_09665 75800e792061591e1eccd6f53f5cfe58 72 SUPERFAMILY SSF50249 1 64 3.21E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold ambt_09665 75800e792061591e1eccd6f53f5cfe58 72 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 13-10-2018 IPR019844 Cold-shock conserved site ambt_09665 75800e792061591e1eccd6f53f5cfe58 72 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 64 4.8E-37 T 13-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 ambt_09665 75800e792061591e1eccd6f53f5cfe58 72 Pfam PF00313 'Cold-shock' DNA-binding domain 4 64 1.8E-28 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ambt_09665 75800e792061591e1eccd6f53f5cfe58 72 PIRSF PIRSF002599 1 71 2.0E-23 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 ambt_09665 75800e792061591e1eccd6f53f5cfe58 72 SMART SM00357 3 67 3.6E-24 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 ambt_12165 406fffd8af9c92a830b6ed5310cdd66e 92 Gene3D G3DSA:1.10.238.10 22 82 2.5E-9 T 13-10-2018 ambt_12165 406fffd8af9c92a830b6ed5310cdd66e 92 Pfam PF13202 EF hand 59 77 0.0017 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 ambt_12165 406fffd8af9c92a830b6ed5310cdd66e 92 Pfam PF13202 EF hand 33 49 3.9E-4 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 ambt_12165 406fffd8af9c92a830b6ed5310cdd66e 92 SUPERFAMILY SSF47473 27 78 5.45E-9 T 13-10-2018 IPR011992 EF-hand domain pair ambt_17430 4eb4bd8aae2c2aec928559ae5da589ce 176 Gene3D G3DSA:3.90.80.10 1 175 2.4E-70 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ambt_17430 4eb4bd8aae2c2aec928559ae5da589ce 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ambt_17430 4eb4bd8aae2c2aec928559ae5da589ce 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.474 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ambt_17430 4eb4bd8aae2c2aec928559ae5da589ce 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 2.2E-53 T 13-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ambt_17430 4eb4bd8aae2c2aec928559ae5da589ce 176 SUPERFAMILY SSF50324 3 173 1.23E-66 T 13-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 ambt_19845 52b514b8c2a642482682e265b728b53d 293 SUPERFAMILY SSF117892 57 193 1.7E-30 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily ambt_19845 52b514b8c2a642482682e265b728b53d 293 Gene3D G3DSA:3.30.479.30 54 190 4.2E-23 T 13-10-2018 ambt_19845 52b514b8c2a642482682e265b728b53d 293 Pfam PF01145 SPFH domain / Band 7 family 22 204 2.2E-34 T 13-10-2018 IPR001107 Band 7 domain ambt_19845 52b514b8c2a642482682e265b728b53d 293 TIGRFAM TIGR01932 hflC: HflC protein 148 288 2.5E-54 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 ambt_19845 52b514b8c2a642482682e265b728b53d 293 TIGRFAM TIGR01932 hflC: HflC protein 1 155 1.3E-54 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 ambt_19845 52b514b8c2a642482682e265b728b53d 293 SMART SM00244 18 188 2.3E-39 T 13-10-2018 IPR001107 Band 7 domain ambt_19845 52b514b8c2a642482682e265b728b53d 293 PIRSF PIRSF005651 1 293 2.4E-99 T 13-10-2018 IPR010200 HflC GO:0016021|GO:0052547 ambt_06965 22a04a2bc83a175ff38a08355dac5d46 84 Gene3D G3DSA:1.10.8.1250 12 84 1.1E-5 T 13-10-2018 IPR038296 Antitoxin ParD superfamily ambt_06965 22a04a2bc83a175ff38a08355dac5d46 84 SUPERFAMILY SSF47598 4 45 3.22E-7 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 ambt_18925 a498e7e09eaf2d121068af4b1c249ffd 368 Pfam PF13469 Sulfotransferase family 109 299 1.9E-10 T 13-10-2018 ambt_18925 a498e7e09eaf2d121068af4b1c249ffd 368 SUPERFAMILY SSF52540 104 356 4.98E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_18925 a498e7e09eaf2d121068af4b1c249ffd 368 Gene3D G3DSA:3.40.50.300 102 366 1.6E-17 T 13-10-2018 ambt_15875 56be38e64105013a5a2e5fed04f66ee1 435 SUPERFAMILY SSF52540 83 363 1.17E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15875 56be38e64105013a5a2e5fed04f66ee1 435 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 7 389 50.44 T 13-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 ambt_15875 56be38e64105013a5a2e5fed04f66ee1 435 Pfam PF00271 Helicase conserved C-terminal domain 242 351 6.2E-29 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_15875 56be38e64105013a5a2e5fed04f66ee1 435 Gene3D G3DSA:3.40.50.300 3 231 2.0E-68 T 13-10-2018 ambt_15875 56be38e64105013a5a2e5fed04f66ee1 435 SMART SM00490 270 351 1.1E-32 T 13-10-2018 IPR001650 Helicase, C-terminal ambt_15875 56be38e64105013a5a2e5fed04f66ee1 435 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ambt_15875 56be38e64105013a5a2e5fed04f66ee1 435 Gene3D G3DSA:3.40.50.300 232 400 1.5E-47 T 13-10-2018 ambt_15875 56be38e64105013a5a2e5fed04f66ee1 435 Pfam PF00270 DEAD/DEAH box helicase 32 207 6.4E-43 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ambt_15875 56be38e64105013a5a2e5fed04f66ee1 435 SMART SM00487 27 234 2.0E-50 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ambt_09750 4cb53c8547bf6fe90e1c6cad8a3d3291 414 SUPERFAMILY SSF53098 33 371 2.5E-37 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_09750 4cb53c8547bf6fe90e1c6cad8a3d3291 414 Pfam PF01609 Transposase DDE domain 145 340 3.2E-16 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_13840 e73631182ac7d884224fc22663369bb8 295 SUPERFAMILY SSF53448 22 246 1.58E-25 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_13840 e73631182ac7d884224fc22663369bb8 295 Pfam PF00535 Glycosyl transferase family 2 31 144 6.8E-9 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_13840 e73631182ac7d884224fc22663369bb8 295 Gene3D G3DSA:3.90.550.10 3 263 2.6E-26 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_01340 675686f88889295d1abba7bf201e6d68 354 Gene3D G3DSA:3.30.360.10 155 350 1.1E-78 T 13-10-2018 ambt_01340 675686f88889295d1abba7bf201e6d68 354 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 27 150 1.1E-24 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ambt_01340 675686f88889295d1abba7bf201e6d68 354 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 140 154 3.2E-14 T 13-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 ambt_01340 675686f88889295d1abba7bf201e6d68 354 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 231 247 3.2E-14 T 13-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 ambt_01340 675686f88889295d1abba7bf201e6d68 354 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 24 37 3.2E-14 T 13-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 ambt_01340 675686f88889295d1abba7bf201e6d68 354 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 78 94 3.2E-14 T 13-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 ambt_01340 675686f88889295d1abba7bf201e6d68 354 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 321 337 3.2E-14 T 13-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 ambt_01340 675686f88889295d1abba7bf201e6d68 354 SUPERFAMILY SSF55347 156 301 1.64E-20 T 13-10-2018 ambt_01340 675686f88889295d1abba7bf201e6d68 354 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 171 229 1.7E-5 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ambt_01340 675686f88889295d1abba7bf201e6d68 354 SUPERFAMILY SSF51735 18 167 6.82E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_01340 675686f88889295d1abba7bf201e6d68 354 Gene3D G3DSA:3.40.50.720 29 328 1.1E-78 T 13-10-2018 ambt_12040 7caf0a0842ca97ed9c586f71dcad5766 68 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 58 6.6E-26 T 13-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system ambt_16105 440574d3ff8af07d28e7a0b1459540d3 751 Gene3D G3DSA:3.30.70.270 324 495 4.5E-13 T 13-10-2018 ambt_16105 440574d3ff8af07d28e7a0b1459540d3 751 SMART SM00052 491 736 2.0E-61 T 13-10-2018 IPR001633 EAL domain ambt_16105 440574d3ff8af07d28e7a0b1459540d3 751 Pfam PF00563 EAL domain 498 731 4.8E-58 T 13-10-2018 IPR001633 EAL domain ambt_16105 440574d3ff8af07d28e7a0b1459540d3 751 SUPERFAMILY SSF55073 332 472 1.49E-9 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_16105 440574d3ff8af07d28e7a0b1459540d3 751 SUPERFAMILY SSF141868 498 739 4.32E-65 T 13-10-2018 IPR035919 EAL domain superfamily ambt_16105 440574d3ff8af07d28e7a0b1459540d3 751 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 424 1.1E-9 T 13-10-2018 IPR000160 GGDEF domain ambt_16105 440574d3ff8af07d28e7a0b1459540d3 751 Gene3D G3DSA:3.20.20.450 496 744 1.0E-67 T 13-10-2018 IPR035919 EAL domain superfamily ambt_09405 5e18ba41cceb80f289556785c4b69cad 186 Pfam PF14279 HNH endonuclease 88 142 2.3E-18 T 13-10-2018 IPR029471 HNH endonuclease 5 ambt_09405 5e18ba41cceb80f289556785c4b69cad 186 SMART SM00507 75 128 1.0E-13 T 13-10-2018 IPR003615 HNH nuclease ambt_09405 5e18ba41cceb80f289556785c4b69cad 186 Gene3D G3DSA:3.30.40.60 64 156 1.3E-22 T 13-10-2018 ambt_17130 3781c79042cca037f44b4737d998e532 1331 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 11 1296 2.2E-241 T 13-10-2018 IPR011836 Conserved hypothetical protein CHP02099 ambt_17130 3781c79042cca037f44b4737d998e532 1331 Pfam PF13502 AsmA-like C-terminal region 1046 1287 4.8E-51 T 13-10-2018 IPR032712 AsmA-like, C-terminal ambt_17130 3781c79042cca037f44b4737d998e532 1331 Pfam PF13116 Protein of unknown function 499 782 3.2E-72 T 13-10-2018 IPR025263 Domain of unknown function DUF3971 ambt_04930 e2bd41863816d5f6e31f2aef13c6df0c 245 Pfam PF00535 Glycosyl transferase family 2 7 166 1.0E-24 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_04930 e2bd41863816d5f6e31f2aef13c6df0c 245 Gene3D G3DSA:3.90.550.10 2 237 4.2E-34 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_04930 e2bd41863816d5f6e31f2aef13c6df0c 245 SUPERFAMILY SSF53448 3 233 3.42E-41 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_07250 5908f559d9adea433aea7be83da44b59 115 SUPERFAMILY SSF49503 32 108 1.22E-6 T 13-10-2018 IPR008972 Cupredoxin ambt_07250 5908f559d9adea433aea7be83da44b59 115 Pfam PF13473 Cupredoxin-like domain 11 114 1.8E-14 T 13-10-2018 IPR028096 EfeO-type cupredoxin-like domain ambt_07250 5908f559d9adea433aea7be83da44b59 115 Gene3D G3DSA:2.60.40.420 18 114 9.9E-17 T 13-10-2018 IPR008972 Cupredoxin ambt_15910 75d8beb9bf5e844f8c4249cb0a70c576 99 Pfam PF02416 mttA/Hcf106 family 4 62 9.5E-9 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ambt_15910 75d8beb9bf5e844f8c4249cb0a70c576 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.3E-20 T 13-10-2018 ambt_15910 75d8beb9bf5e844f8c4249cb0a70c576 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.3E-20 T 13-10-2018 ambt_15910 75d8beb9bf5e844f8c4249cb0a70c576 99 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.3E-20 T 13-10-2018 ambt_15910 75d8beb9bf5e844f8c4249cb0a70c576 99 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 9.5E-27 T 13-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 ambt_06555 5808f013e9eb2d9cea61a253c14f83f9 115 Gene3D G3DSA:3.10.180.10 2 113 1.3E-12 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_06555 5808f013e9eb2d9cea61a253c14f83f9 115 SUPERFAMILY SSF54593 6 111 1.32E-14 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_21725 b8beaec53974e1b0de9563634d936391 69 Pfam PF11137 Protein of unknown function (DUF2909) 3 62 2.1E-18 T 13-10-2018 IPR021313 Protein of unknown function DUF2909 ambt_11345 a87c349b34cfb7bb078b7c3cea8e2eaa 165 SUPERFAMILY SSF54001 5 71 8.34E-7 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ambt_11345 a87c349b34cfb7bb078b7c3cea8e2eaa 165 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 4 123 6.9E-22 T 13-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted ambt_11345 a87c349b34cfb7bb078b7c3cea8e2eaa 165 Gene3D G3DSA:3.10.620.30 1 165 6.7E-49 T 13-10-2018 ambt_13930 70ce3ab82cdebba1d0495e019394eb30 222 Pfam PF03379 CcmB protein 7 219 5.0E-73 T 13-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13930 70ce3ab82cdebba1d0495e019394eb30 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 1.5E-54 T 13-10-2018 ambt_13930 70ce3ab82cdebba1d0495e019394eb30 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 1.5E-54 T 13-10-2018 ambt_13930 70ce3ab82cdebba1d0495e019394eb30 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 1.5E-54 T 13-10-2018 ambt_13930 70ce3ab82cdebba1d0495e019394eb30 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 1.5E-54 T 13-10-2018 ambt_13930 70ce3ab82cdebba1d0495e019394eb30 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 1.5E-54 T 13-10-2018 ambt_13930 70ce3ab82cdebba1d0495e019394eb30 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 1.5E-54 T 13-10-2018 ambt_13930 70ce3ab82cdebba1d0495e019394eb30 222 PIRSF PIRSF002764 1 222 3.6E-73 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria ambt_13930 70ce3ab82cdebba1d0495e019394eb30 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 8 218 5.4E-75 T 13-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria ambt_14510 ca90a596c7db4f10cea5846d18125a1c 233 PRINTS PR00625 DnaJ domain signature 192 207 2.2E-8 T 13-10-2018 IPR001623 DnaJ domain ambt_14510 ca90a596c7db4f10cea5846d18125a1c 233 PRINTS PR00625 DnaJ domain signature 174 192 2.2E-8 T 13-10-2018 IPR001623 DnaJ domain ambt_14510 ca90a596c7db4f10cea5846d18125a1c 233 PRINTS PR00625 DnaJ domain signature 214 233 2.2E-8 T 13-10-2018 IPR001623 DnaJ domain ambt_14510 ca90a596c7db4f10cea5846d18125a1c 233 SUPERFAMILY SSF46565 91 229 1.07E-22 T 13-10-2018 IPR036869 Chaperone J-domain superfamily ambt_14510 ca90a596c7db4f10cea5846d18125a1c 233 SMART SM00271 171 231 6.2E-10 T 13-10-2018 IPR001623 DnaJ domain ambt_14510 ca90a596c7db4f10cea5846d18125a1c 233 Gene3D G3DSA:1.10.287.110 148 232 2.9E-17 T 13-10-2018 IPR036869 Chaperone J-domain superfamily ambt_14510 ca90a596c7db4f10cea5846d18125a1c 233 SUPERFAMILY SSF158682 20 126 3.4E-9 T 13-10-2018 IPR029024 TerB-like ambt_14510 ca90a596c7db4f10cea5846d18125a1c 233 Pfam PF05099 Tellurite resistance protein TerB 20 124 2.2E-7 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal ambt_14510 ca90a596c7db4f10cea5846d18125a1c 233 Pfam PF00226 DnaJ domain 175 229 9.1E-13 T 13-10-2018 IPR001623 DnaJ domain ambt_14510 ca90a596c7db4f10cea5846d18125a1c 233 Gene3D G3DSA:1.10.3680.10 3 135 3.7E-9 T 13-10-2018 IPR029024 TerB-like ambt_06955 13beccb879f420e865d2f08b303c0952 771 Gene3D G3DSA:3.20.20.140 440 662 8.4E-28 T 13-10-2018 ambt_06955 13beccb879f420e865d2f08b303c0952 771 SUPERFAMILY SSF89550 450 662 3.92E-23 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ambt_02990 878fcee4f8ca280f038607df8979e361 113 Gene3D G3DSA:1.10.10.10 4 108 1.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_02990 878fcee4f8ca280f038607df8979e361 113 Pfam PF01638 HxlR-like helix-turn-helix 26 107 2.0E-16 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type ambt_02990 878fcee4f8ca280f038607df8979e361 113 SUPERFAMILY SSF46785 19 103 6.56E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_22220 288b515c7b16eee0a5d8d1590a194473 145 SUPERFAMILY SSF52218 6 134 2.01E-35 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_22220 288b515c7b16eee0a5d8d1590a194473 145 Pfam PF00258 Flavodoxin 7 125 2.1E-21 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ambt_22220 288b515c7b16eee0a5d8d1590a194473 145 Gene3D G3DSA:3.40.50.360 3 144 1.6E-39 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_15055 77cd12bdb89c615e1712ff508815962d 394 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 22 118 3.8E-19 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ambt_15055 77cd12bdb89c615e1712ff508815962d 394 SUPERFAMILY SSF51604 106 385 2.72E-73 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ambt_15055 77cd12bdb89c615e1712ff508815962d 394 Gene3D G3DSA:3.20.20.120 111 372 1.3E-143 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ambt_15055 77cd12bdb89c615e1712ff508815962d 394 SMART SM00922 146 260 1.5E-9 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ambt_15055 77cd12bdb89c615e1712ff508815962d 394 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 93 118 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 ambt_15055 77cd12bdb89c615e1712ff508815962d 394 Gene3D G3DSA:3.30.390.10 19 382 1.3E-143 T 13-10-2018 IPR029017 Enolase-like, N-terminal ambt_15055 77cd12bdb89c615e1712ff508815962d 394 SUPERFAMILY SSF54826 1 122 1.12E-30 T 13-10-2018 ambt_15055 77cd12bdb89c615e1712ff508815962d 394 Pfam PF13378 Enolase C-terminal domain-like 150 380 3.5E-49 T 13-10-2018 IPR029065 Enolase C-terminal domain-like ambt_04020 c288cf938bf4db3c7b32e4700f4ea50c 298 SUPERFAMILY SSF52768 3 282 1.25E-76 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily ambt_04020 c288cf938bf4db3c7b32e4700f4ea50c 298 PRINTS PR01270 Histone deacetylase superfamily signature 116 139 3.0E-13 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ambt_04020 c288cf938bf4db3c7b32e4700f4ea50c 298 PRINTS PR01270 Histone deacetylase superfamily signature 150 165 3.0E-13 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ambt_04020 c288cf938bf4db3c7b32e4700f4ea50c 298 PRINTS PR01270 Histone deacetylase superfamily signature 224 234 3.0E-13 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ambt_04020 c288cf938bf4db3c7b32e4700f4ea50c 298 Pfam PF00850 Histone deacetylase domain 25 280 1.4E-45 T 13-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ambt_04020 c288cf938bf4db3c7b32e4700f4ea50c 298 Gene3D G3DSA:3.40.800.20 2 294 4.1E-61 T 13-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ambt_02275 aacff58bb6b277ed7b5b1cfa6d0686d0 301 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 157 174 8.7E-27 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial ambt_02275 aacff58bb6b277ed7b5b1cfa6d0686d0 301 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 237 252 8.7E-27 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial ambt_02275 aacff58bb6b277ed7b5b1cfa6d0686d0 301 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 225 236 8.7E-27 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial ambt_02275 aacff58bb6b277ed7b5b1cfa6d0686d0 301 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 214 224 8.7E-27 T 13-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial ambt_02275 aacff58bb6b277ed7b5b1cfa6d0686d0 301 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 138 2.3E-34 T 13-10-2018 IPR010627 Peptidase A24A, N-terminal ambt_02275 aacff58bb6b277ed7b5b1cfa6d0686d0 301 Pfam PF01478 Type IV leader peptidase family 149 257 1.9E-24 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 ambt_08755 df5c1157066a2fccbbace3e28b7cbece 245 PIRSF PIRSF005902 1 244 4.0E-33 T 13-10-2018 IPR001130 TatD family GO:0016788 ambt_08755 df5c1157066a2fccbbace3e28b7cbece 245 Pfam PF01026 TatD related DNase 3 232 9.0E-32 T 13-10-2018 IPR001130 TatD family GO:0016788 ambt_08755 df5c1157066a2fccbbace3e28b7cbece 245 SUPERFAMILY SSF51556 1 239 5.45E-43 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_08755 df5c1157066a2fccbbace3e28b7cbece 245 Gene3D G3DSA:3.20.20.140 1 245 1.2E-59 T 13-10-2018 ambt_09350 ee1fbaa77be71a7d674029cbb9ee4e8d 342 SUPERFAMILY SSF51726 7 340 3.92E-64 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ambt_09350 ee1fbaa77be71a7d674029cbb9ee4e8d 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 2.0E-35 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ambt_09350 ee1fbaa77be71a7d674029cbb9ee4e8d 342 Gene3D G3DSA:3.20.20.210 1 342 3.4E-129 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ambt_09350 ee1fbaa77be71a7d674029cbb9ee4e8d 342 PIRSF PIRSF005632 1 342 3.9E-193 T 13-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit ambt_03915 31290a25154a1df203db842277cc5fda 478 Pfam PF01458 Uncharacterized protein family (UPF0051) 217 449 1.4E-65 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ambt_03915 31290a25154a1df203db842277cc5fda 478 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 12 469 1.6E-193 T 13-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 ambt_03915 31290a25154a1df203db842277cc5fda 478 SUPERFAMILY SSF101960 33 475 4.32E-139 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ambt_18010 c472669fc9a1fba7c292e84fb90c50e7 156 Pfam PF00866 Ring hydroxylating beta subunit 17 149 1.2E-10 T 13-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 ambt_18010 c472669fc9a1fba7c292e84fb90c50e7 156 Gene3D G3DSA:3.10.450.50 1 156 4.5E-34 T 13-10-2018 ambt_18010 c472669fc9a1fba7c292e84fb90c50e7 156 SUPERFAMILY SSF54427 2 156 2.21E-41 T 13-10-2018 IPR032710 NTF2-like domain superfamily ambt_17445 75dffab5e8dd401ce5f72371b3421b8f 211 SUPERFAMILY SSF52507 5 201 9.03E-58 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ambt_17445 75dffab5e8dd401ce5f72371b3421b8f 211 Gene3D G3DSA:3.40.50.1950 1 203 2.0E-78 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ambt_17445 75dffab5e8dd401ce5f72371b3421b8f 211 Pfam PF02441 Flavoprotein 5 181 3.2E-25 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 ambt_17445 75dffab5e8dd401ce5f72371b3421b8f 211 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 34.53 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like ambt_17445 75dffab5e8dd401ce5f72371b3421b8f 211 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 7 200 1.3E-57 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like ambt_01495 bc5aa7ed5e5453256d7820ffcee184ae 130 Gene3D G3DSA:3.40.50.2300 2 130 7.6E-21 T 13-10-2018 ambt_01495 bc5aa7ed5e5453256d7820ffcee184ae 130 SMART SM00448 2 117 4.1E-14 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01495 bc5aa7ed5e5453256d7820ffcee184ae 130 SUPERFAMILY SSF52172 3 122 1.07E-21 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01495 bc5aa7ed5e5453256d7820ffcee184ae 130 Pfam PF00072 Response regulator receiver domain 4 116 2.0E-15 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_11715 010c64e44d62bb69004ba2ace2b591a8 840 Pfam PF02687 FtsX-like permease family 289 378 8.6E-7 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ambt_06730 bbb9511c822006bf4d73c8d3582b60e7 274 SUPERFAMILY SSF57997 92 251 1.9E-5 T 13-10-2018 ambt_06730 bbb9511c822006bf4d73c8d3582b60e7 274 Gene3D G3DSA:1.20.5.340 175 270 5.6E-5 T 13-10-2018 ambt_12425 90eee375ab68b7ad0462390330426034 198 Gene3D G3DSA:3.40.50.300 2 198 6.5E-79 T 13-10-2018 ambt_12425 90eee375ab68b7ad0462390330426034 198 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 191 2.3E-79 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ambt_12425 90eee375ab68b7ad0462390330426034 198 Pfam PF01583 Adenylylsulphate kinase 27 177 9.1E-72 T 13-10-2018 ambt_12425 90eee375ab68b7ad0462390330426034 198 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 37.606 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ambt_12425 90eee375ab68b7ad0462390330426034 198 SUPERFAMILY SSF52540 24 195 6.49E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_10660 8577193dd9ced498aba7325e74daa0bb 738 Gene3D G3DSA:3.40.50.300 465 736 2.7E-67 T 13-10-2018 ambt_10660 8577193dd9ced498aba7325e74daa0bb 738 Pfam PF02706 Chain length determinant protein 17 107 5.1E-12 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 ambt_10660 8577193dd9ced498aba7325e74daa0bb 738 SUPERFAMILY SSF52540 542 721 1.65E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_10660 8577193dd9ced498aba7325e74daa0bb 738 Pfam PF13614 AAA domain 553 692 5.0E-10 T 13-10-2018 IPR025669 AAA domain ambt_10660 8577193dd9ced498aba7325e74daa0bb 738 Pfam PF13807 G-rich domain on putative tyrosine kinase 399 469 2.3E-11 T 13-10-2018 IPR032807 Tyrosine kinase, G-rich domain ambt_10660 8577193dd9ced498aba7325e74daa0bb 738 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 522 720 1.5E-43 T 13-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 ambt_12225 02eef4627f7a87ad8db8510f701438d2 291 Pfam PF00756 Putative esterase 48 249 5.1E-19 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 ambt_12225 02eef4627f7a87ad8db8510f701438d2 291 SUPERFAMILY SSF53474 33 281 2.65E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_12225 02eef4627f7a87ad8db8510f701438d2 291 Gene3D G3DSA:3.40.50.1820 29 290 4.5E-58 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_16860 804d2bd759bef9c3692788b8c7ca190c 305 Pfam PF00589 Phage integrase family 113 282 6.7E-29 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_16860 804d2bd759bef9c3692788b8c7ca190c 305 Gene3D G3DSA:1.10.443.10 104 303 1.5E-41 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_16860 804d2bd759bef9c3692788b8c7ca190c 305 SUPERFAMILY SSF56349 111 292 3.53E-45 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_04455 0345a7f52e1dcc8989f2089e7f875faf 255 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 253 1.0E-87 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD ambt_04455 0345a7f52e1dcc8989f2089e7f875faf 255 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 248 37.688 T 13-10-2018 IPR017689 Outer membrane protein assembly factor BamD ambt_04455 0345a7f52e1dcc8989f2089e7f875faf 255 SUPERFAMILY SSF48452 38 123 5.87E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04455 0345a7f52e1dcc8989f2089e7f875faf 255 Pfam PF13525 Outer membrane lipoprotein 36 239 5.1E-75 T 13-10-2018 IPR039565 Outer membrane lipoprotein BamD-like ambt_04455 0345a7f52e1dcc8989f2089e7f875faf 255 Gene3D G3DSA:1.25.40.10 37 254 8.3E-60 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_03035 0c57aa99eb330a885f96cc08df178ac2 271 Pfam PF01471 Putative peptidoglycan binding domain 5 32 1.9E-4 T 13-10-2018 IPR002477 Peptidoglycan binding-like ambt_03035 0c57aa99eb330a885f96cc08df178ac2 271 SUPERFAMILY SSF53955 176 255 4.09E-5 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily ambt_08060 d51497bed4751331bee046ffa6ea2d83 348 Gene3D G3DSA:2.130.10.10 15 225 9.9E-12 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_08060 d51497bed4751331bee046ffa6ea2d83 348 Pfam PF14870 Photosynthesis system II assembly factor YCF48 108 285 2.6E-10 T 13-10-2018 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain ambt_08060 d51497bed4751331bee046ffa6ea2d83 348 SUPERFAMILY SSF110296 43 291 3.14E-30 T 13-10-2018 ambt_13910 8459880136c18a85afada03ed2226d05 681 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 640 1.3E-123 T 13-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.9E-89 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.9E-89 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.9E-89 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.9E-89 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.9E-89 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.9E-89 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.9E-89 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.9E-89 T 13-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 Pfam PF01578 Cytochrome C assembly protein 89 296 4.3E-52 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 3.7E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 633 646 3.7E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 3.7E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 3.7E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 3.7E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 3.7E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 3.7E-51 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13910 8459880136c18a85afada03ed2226d05 681 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 643 1.0E-240 T 13-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_09200 dd5d0d36ed1dcc779eb6c013da4d9058 288 SUPERFAMILY SSF56752 3 284 2.22E-71 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ambt_09200 dd5d0d36ed1dcc779eb6c013da4d9058 288 Gene3D G3DSA:3.20.10.10 127 287 7.7E-52 T 13-10-2018 ambt_09200 dd5d0d36ed1dcc779eb6c013da4d9058 288 ProSitePatterns PS00770 Aminotransferases class-IV signature. 186 215 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 ambt_09200 dd5d0d36ed1dcc779eb6c013da4d9058 288 Pfam PF01063 Amino-transferase class IV 30 259 2.4E-45 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ambt_09200 dd5d0d36ed1dcc779eb6c013da4d9058 288 Gene3D G3DSA:3.30.470.10 1 121 1.9E-29 T 13-10-2018 ambt_07095 9c2c2cfc199b173d1f38b524e251952f 129 Gene3D G3DSA:2.60.15.10 1 124 8.4E-17 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07095 9c2c2cfc199b173d1f38b524e251952f 129 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 1 81 2.3E-17 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07095 9c2c2cfc199b173d1f38b524e251952f 129 SUPERFAMILY SSF51344 1 82 8.76E-16 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_07095 9c2c2cfc199b173d1f38b524e251952f 129 TIGRFAM TIGR03166 alt_F1F0_F1_eps: alternate F1F0 ATPase, F1 subunit epsilon 3 122 5.8E-42 T 13-10-2018 IPR024037 Alternate ATP synthase, F1 complex, subunit epsilon ambt_01185 0acc0a8d146a7966e0b266fe770bd90b 326 TIGRFAM TIGR03866 PQQ_ABC_repeats: PQQ-dependent catabolism-associated beta-propeller protein 24 324 1.9E-144 T 13-10-2018 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein ambt_01185 0acc0a8d146a7966e0b266fe770bd90b 326 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 287 323 7.2E-13 T 13-10-2018 IPR011964 YVTN beta-propeller repeat ambt_01185 0acc0a8d146a7966e0b266fe770bd90b 326 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 107 148 4.6E-11 T 13-10-2018 IPR011964 YVTN beta-propeller repeat ambt_01185 0acc0a8d146a7966e0b266fe770bd90b 326 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 28 62 1.3E-8 T 13-10-2018 IPR011964 YVTN beta-propeller repeat ambt_01185 0acc0a8d146a7966e0b266fe770bd90b 326 Gene3D G3DSA:2.130.10.10 226 324 2.2E-18 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_01185 0acc0a8d146a7966e0b266fe770bd90b 326 SUPERFAMILY SSF50974 5 323 7.32E-71 T 13-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 ambt_01185 0acc0a8d146a7966e0b266fe770bd90b 326 Gene3D G3DSA:2.130.10.10 26 225 3.5E-51 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ambt_01185 0acc0a8d146a7966e0b266fe770bd90b 326 Pfam PF02239 Cytochrome D1 heme domain 73 176 9.0E-8 T 13-10-2018 ambt_17975 f3133bbc32d050224732d2bfdfe1a0c3 375 Pfam PF02195 ParB-like nuclease domain 115 182 6.2E-7 T 13-10-2018 IPR003115 ParB/Sulfiredoxin ambt_17975 f3133bbc32d050224732d2bfdfe1a0c3 375 SMART SM00470 110 200 0.0046 T 13-10-2018 IPR003115 ParB/Sulfiredoxin ambt_17975 f3133bbc32d050224732d2bfdfe1a0c3 375 Gene3D G3DSA:3.90.1530.30 118 184 6.2E-6 T 13-10-2018 ambt_17975 f3133bbc32d050224732d2bfdfe1a0c3 375 SUPERFAMILY SSF110849 118 202 1.34E-9 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily ambt_16130 f7a50d413858ef00ca076c381a037267 285 Pfam PF02798 Glutathione S-transferase, N-terminal domain 64 127 8.8E-8 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_16130 f7a50d413858ef00ca076c381a037267 285 Gene3D G3DSA:3.40.30.10 19 257 6.4E-107 T 13-10-2018 ambt_16130 f7a50d413858ef00ca076c381a037267 285 SUPERFAMILY SSF47616 118 260 2.73E-32 T 13-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily ambt_16130 f7a50d413858ef00ca076c381a037267 285 Pfam PF13410 Glutathione S-transferase, C-terminal domain 177 243 1.0E-7 T 13-10-2018 ambt_16130 f7a50d413858ef00ca076c381a037267 285 Gene3D G3DSA:1.20.1050.10 134 250 6.4E-107 T 13-10-2018 ambt_16130 f7a50d413858ef00ca076c381a037267 285 SUPERFAMILY SSF52833 40 131 6.83E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_10050 8c811132768eafd6752ab2c03e8db848 152 Pfam PF13673 Acetyltransferase (GNAT) domain 34 149 5.5E-18 T 13-10-2018 IPR000182 GNAT domain ambt_10050 8c811132768eafd6752ab2c03e8db848 152 SUPERFAMILY SSF55729 1 149 2.79E-35 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_10050 8c811132768eafd6752ab2c03e8db848 152 Gene3D G3DSA:3.40.630.30 1 149 1.7E-42 T 13-10-2018 ambt_08190 96ca92376004912b073e37f61b54fe35 125 Gene3D G3DSA:1.10.3830.10 10 125 1.4E-36 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 ambt_08190 96ca92376004912b073e37f61b54fe35 125 Pfam PF01219 Prokaryotic diacylglycerol kinase 24 124 2.4E-32 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 ambt_00195 ff77f94dcacddbb3db3263f902ce64c6 246 SUPERFAMILY SSF53067 116 240 7.34E-24 T 13-10-2018 ambt_00195 ff77f94dcacddbb3db3263f902ce64c6 246 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 8 239 2.7E-29 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ambt_00195 ff77f94dcacddbb3db3263f902ce64c6 246 SUPERFAMILY SSF53067 8 111 2.37E-18 T 13-10-2018 ambt_00195 ff77f94dcacddbb3db3263f902ce64c6 246 Pfam PF03309 Type III pantothenate kinase 8 189 1.1E-36 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ambt_00195 ff77f94dcacddbb3db3263f902ce64c6 246 Gene3D G3DSA:3.30.420.40 10 236 1.2E-49 T 13-10-2018 ambt_00195 ff77f94dcacddbb3db3263f902ce64c6 246 Hamap MF_01274 Type III pantothenate kinase [coaX]. 6 244 15.986 T 13-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ambt_00195 ff77f94dcacddbb3db3263f902ce64c6 246 Gene3D G3DSA:3.30.420.490 117 229 1.2E-49 T 13-10-2018 ambt_01740 8e06cd4221c7e5c837f3ff5880fefe66 754 Gene3D G3DSA:2.40.170.20 53 754 5.7E-114 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_01740 8e06cd4221c7e5c837f3ff5880fefe66 754 SUPERFAMILY SSF56935 38 733 1.01E-101 T 13-10-2018 ambt_01740 8e06cd4221c7e5c837f3ff5880fefe66 754 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 170 8.2E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_04570 4e627e79680ded8eb68fb3a8ee0be2c7 495 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 472 495 2.1E-4 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain ambt_14660 1e80beac0e2fc10f2a7e467cfc2a91c3 151 Gene3D G3DSA:2.30.30.220 1 129 3.2E-47 T 13-10-2018 IPR036760 SspB-like superfamily ambt_14660 1e80beac0e2fc10f2a7e467cfc2a91c3 151 PIRSF PIRSF005276 1 151 1.6E-50 T 13-10-2018 IPR007481 Stringent starvation protein B ambt_14660 1e80beac0e2fc10f2a7e467cfc2a91c3 151 SUPERFAMILY SSF101738 1 113 1.83E-41 T 13-10-2018 IPR036760 SspB-like superfamily ambt_14660 1e80beac0e2fc10f2a7e467cfc2a91c3 151 Pfam PF04386 Stringent starvation protein B 7 151 6.6E-35 T 13-10-2018 IPR007481 Stringent starvation protein B ambt_09185 1e82edf2cd8fe0b8c3fc44d5ff7df8ff 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 10 446 2.4E-130 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ambt_09185 1e82edf2cd8fe0b8c3fc44d5ff7df8ff 446 Pfam PF02447 GntP family permease 8 445 2.2E-140 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ambt_09185 1e82edf2cd8fe0b8c3fc44d5ff7df8ff 446 PIRSF PIRSF002746 2 446 3.7E-151 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ambt_01390 fd753dbbc87654f03b7ed8abd7bee8c1 177 Pfam PF04542 Sigma-70 region 2 24 90 3.7E-13 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_01390 fd753dbbc87654f03b7ed8abd7bee8c1 177 Gene3D G3DSA:1.10.1740.10 8 88 1.0E-26 T 13-10-2018 ambt_01390 fd753dbbc87654f03b7ed8abd7bee8c1 177 Pfam PF08281 Sigma-70, region 4 119 171 1.5E-9 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_01390 fd753dbbc87654f03b7ed8abd7bee8c1 177 SUPERFAMILY SSF88659 117 175 1.46E-12 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_01390 fd753dbbc87654f03b7ed8abd7bee8c1 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 175 2.8E-24 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_01390 fd753dbbc87654f03b7ed8abd7bee8c1 177 Gene3D G3DSA:1.10.10.10 89 177 3.2E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_01390 fd753dbbc87654f03b7ed8abd7bee8c1 177 SUPERFAMILY SSF88946 3 104 6.67E-21 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_13355 2bd2458d0666f9e2428e490f85f5f857 443 SUPERFAMILY SSF56801 88 437 6.15E-52 T 13-10-2018 ambt_13355 2bd2458d0666f9e2428e490f85f5f857 443 Gene3D G3DSA:3.30.300.30 344 443 6.0E-16 T 13-10-2018 ambt_13355 2bd2458d0666f9e2428e490f85f5f857 443 Gene3D G3DSA:3.40.50.12780 56 343 2.0E-27 T 13-10-2018 ambt_13355 2bd2458d0666f9e2428e490f85f5f857 443 Pfam PF13193 AMP-binding enzyme C-terminal domain 356 433 1.2E-8 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ambt_13355 2bd2458d0666f9e2428e490f85f5f857 443 Pfam PF00501 AMP-binding enzyme 100 346 5.8E-20 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ambt_22215 cdccaac90434b79d7234f18eb1ecd929 223 Gene3D G3DSA:1.10.8.1180 114 183 3.6E-13 T 13-10-2018 ambt_19680 c26c03b38058a88ec4a2acbf47fb9bee 204 Gene3D G3DSA:3.50.30.100 2 178 2.1E-49 T 13-10-2018 ambt_19680 c26c03b38058a88ec4a2acbf47fb9bee 204 SUPERFAMILY SSF89562 7 165 1.7E-42 T 13-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ambt_19680 c26c03b38058a88ec4a2acbf47fb9bee 204 Pfam PF03737 Aldolase/RraA 10 156 2.0E-40 T 13-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ambt_14865 6a92771cd741e867d4f9c2461e76b088 364 Pfam PF00072 Response regulator receiver domain 14 128 1.9E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_14865 6a92771cd741e867d4f9c2461e76b088 364 SUPERFAMILY SSF52172 11 147 1.38E-36 T 13-10-2018 IPR011006 CheY-like superfamily ambt_14865 6a92771cd741e867d4f9c2461e76b088 364 Gene3D G3DSA:3.40.50.2300 1 148 3.1E-37 T 13-10-2018 ambt_14865 6a92771cd741e867d4f9c2461e76b088 364 Pfam PF01966 HD domain 176 297 1.3E-22 T 13-10-2018 IPR006674 HD domain ambt_14865 6a92771cd741e867d4f9c2461e76b088 364 SMART SM00448 12 128 2.9E-38 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_14865 6a92771cd741e867d4f9c2461e76b088 364 SMART SM00471 170 307 1.4E-8 T 13-10-2018 IPR003607 HD/PDEase domain ambt_14865 6a92771cd741e867d4f9c2461e76b088 364 SUPERFAMILY SSF109604 164 336 2.36E-41 T 13-10-2018 ambt_14865 6a92771cd741e867d4f9c2461e76b088 364 Gene3D G3DSA:1.10.3210.10 149 349 4.1E-71 T 13-10-2018 ambt_00500 d33a26de8c0b44afeded080143b45475 168 Pfam PF06032 Protein of unknown function (DUF917) 72 159 1.2E-24 T 13-10-2018 IPR010318 Protein of unknown function DUF917 ambt_00500 d33a26de8c0b44afeded080143b45475 168 SUPERFAMILY SSF160991 73 159 3.53E-23 T 13-10-2018 ambt_01970 67519e729e9e69765ac1e54fcc351c3c 58 Pfam PF12065 Protein of unknown function (DUF3545) 2 56 3.5E-22 T 13-10-2018 IPR021932 Protein of unknown function DUF3545 ambt_08465 5108609d9db7a202f230058ca48be864 251 Gene3D G3DSA:2.50.20.10 62 251 1.3E-38 T 13-10-2018 ambt_08465 5108609d9db7a202f230058ca48be864 251 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 58 251 6.0E-34 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 ambt_08465 5108609d9db7a202f230058ca48be864 251 SUPERFAMILY SSF89392 64 251 1.02E-37 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX ambt_08465 5108609d9db7a202f230058ca48be864 251 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 47 250 24.001 T 13-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 ambt_08465 5108609d9db7a202f230058ca48be864 251 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 71 227 4.8E-41 T 13-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.2E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.2E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.2E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.2E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.2E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.2E-37 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 3.8E-12 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 SUPERFAMILY SSF51998 222 743 1.5E-167 T 13-10-2018 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 SUPERFAMILY SSF48168 10 221 7.98E-73 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 Gene3D G3DSA:3.20.70.20 78 741 5.0E-156 T 13-10-2018 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 661 6.9E-114 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.0E-175 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ambt_08540 3441abdaeee2a2d84b2465ec18b49393 773 Pfam PF03477 ATP cone domain 6 92 1.9E-16 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 ambt_10085 042adba8dffd3cd2593425739da3c9f4 126 Pfam PF13817 IS66 C-terminal element 85 121 6.5E-10 T 13-10-2018 IPR039552 Transposase IS66, C-terminal ambt_10085 042adba8dffd3cd2593425739da3c9f4 126 Pfam PF03050 Transposase IS66 family 2 78 7.5E-26 T 13-10-2018 IPR004291 Transposase, IS66 ambt_03680 a438df218363c0d9e6709c7b90c6607f 284 Pfam PF00899 ThiF family 9 267 3.7E-41 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ambt_03680 a438df218363c0d9e6709c7b90c6607f 284 Gene3D G3DSA:3.40.50.720 3 268 1.4E-45 T 13-10-2018 ambt_03680 a438df218363c0d9e6709c7b90c6607f 284 SUPERFAMILY SSF69572 7 262 1.23E-48 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ambt_22040 bb7c84dc3f14f2a28297446f72f37324 442 Pfam PF13635 Domain of unknown function (DUF4143) 221 391 2.1E-18 T 13-10-2018 IPR025420 Domain of unknown function DUF4143 ambt_22040 bb7c84dc3f14f2a28297446f72f37324 442 Pfam PF13173 AAA domain 18 147 1.1E-22 T 13-10-2018 ambt_22040 bb7c84dc3f14f2a28297446f72f37324 442 SUPERFAMILY SSF52540 4 193 2.32E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15940 3dd0bc9b0c802d51ce16443b27814806 164 Pfam PF14539 Domain of unknown function (DUF4442) 23 158 4.1E-30 T 13-10-2018 IPR027961 Protein of unknown function DUF4442 ambt_15940 3dd0bc9b0c802d51ce16443b27814806 164 Gene3D G3DSA:3.10.129.10 10 162 5.0E-35 T 13-10-2018 ambt_15940 3dd0bc9b0c802d51ce16443b27814806 164 SUPERFAMILY SSF54637 23 163 7.46E-19 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_17490 bfed9f1c67a5598ed146baf5c2c06757 307 Pfam PF00589 Phage integrase family 118 290 7.0E-42 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_17490 bfed9f1c67a5598ed146baf5c2c06757 307 Gene3D G3DSA:1.10.150.130 13 103 4.3E-15 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal ambt_17490 bfed9f1c67a5598ed146baf5c2c06757 307 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 304 54.519 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD ambt_17490 bfed9f1c67a5598ed146baf5c2c06757 307 SUPERFAMILY SSF56349 14 297 4.12E-52 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_17490 bfed9f1c67a5598ed146baf5c2c06757 307 Gene3D G3DSA:1.10.443.10 115 298 1.9E-54 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_17490 bfed9f1c67a5598ed146baf5c2c06757 307 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 93 2.1E-14 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ambt_19195 82161ea3aa049d2e132c954494a64dd8 344 SUPERFAMILY SSF74653 47 111 9.55E-12 T 13-10-2018 ambt_19195 82161ea3aa049d2e132c954494a64dd8 344 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 47 106 6.3E-7 T 13-10-2018 IPR037682 TonB, C-terminal GO:0055085 ambt_19195 82161ea3aa049d2e132c954494a64dd8 344 Gene3D G3DSA:3.30.1150.10 24 113 1.1E-9 T 13-10-2018 ambt_02580 fb99cff8f441e974905649f98e765a8b 1002 Gene3D G3DSA:3.40.50.410 16 215 6.8E-20 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_02580 fb99cff8f441e974905649f98e765a8b 1002 SUPERFAMILY SSF53300 27 212 1.59E-18 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_02580 fb99cff8f441e974905649f98e765a8b 1002 Pfam PF06707 Protein of unknown function (DUF1194) 26 204 5.4E-15 T 13-10-2018 IPR010607 Protein of unknown function DUF1194 ambt_02580 fb99cff8f441e974905649f98e765a8b 1002 Gene3D G3DSA:1.10.1330.10 938 995 1.5E-9 T 13-10-2018 ambt_02580 fb99cff8f441e974905649f98e765a8b 1002 Gene3D G3DSA:2.60.40.10 835 937 1.1E-7 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_02580 fb99cff8f441e974905649f98e765a8b 1002 ProSitePatterns PS00018 EF-hand calcium-binding domain. 942 954 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_02580 fb99cff8f441e974905649f98e765a8b 1002 SUPERFAMILY SSF63446 938 989 9.68E-8 T 13-10-2018 IPR036439 Dockerin domain superfamily GO:0000272 ambt_02580 fb99cff8f441e974905649f98e765a8b 1002 PRINTS PR00453 Von Willebrand factor type A domain signature 811 819 3.0E-7 T 13-10-2018 ambt_02580 fb99cff8f441e974905649f98e765a8b 1002 PRINTS PR00453 Von Willebrand factor type A domain signature 27 44 3.0E-7 T 13-10-2018 ambt_02580 fb99cff8f441e974905649f98e765a8b 1002 PRINTS PR00453 Von Willebrand factor type A domain signature 68 82 3.0E-7 T 13-10-2018 ambt_02580 fb99cff8f441e974905649f98e765a8b 1002 SMART SM00327 26 205 3.6E-9 T 13-10-2018 IPR002035 von Willebrand factor, type A ambt_18320 4647f8bd2e8bf7f6600a9fe3ef908ea1 213 SUPERFAMILY SSF52540 6 195 2.14E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_18320 4647f8bd2e8bf7f6600a9fe3ef908ea1 213 ProSitePatterns PS00856 Guanylate kinase-like signature. 45 62 - T 13-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 ambt_18320 4647f8bd2e8bf7f6600a9fe3ef908ea1 213 SMART SM00072 5 192 1.8E-67 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ambt_18320 4647f8bd2e8bf7f6600a9fe3ef908ea1 213 Hamap MF_00328 Guanylate kinase [gmk]. 4 192 36.791 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ambt_18320 4647f8bd2e8bf7f6600a9fe3ef908ea1 213 Pfam PF00625 Guanylate kinase 8 188 1.1E-57 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ambt_18320 4647f8bd2e8bf7f6600a9fe3ef908ea1 213 Gene3D G3DSA:3.40.50.300 10 188 3.6E-70 T 13-10-2018 ambt_18320 4647f8bd2e8bf7f6600a9fe3ef908ea1 213 Gene3D G3DSA:3.30.63.10 42 101 3.6E-70 T 13-10-2018 ambt_18320 4647f8bd2e8bf7f6600a9fe3ef908ea1 213 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 189 2.5E-73 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ambt_01910 81214d709e202b8e1d14d480d4e289b2 156 SMART SM00226 1 136 7.8E-26 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ambt_01910 81214d709e202b8e1d14d480d4e289b2 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 130 4.2E-19 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ambt_01910 81214d709e202b8e1d14d480d4e289b2 156 Gene3D G3DSA:3.40.50.2300 1 140 4.9E-37 T 13-10-2018 ambt_01910 81214d709e202b8e1d14d480d4e289b2 156 SUPERFAMILY SSF52788 1 135 4.71E-37 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ambt_15735 0e69bb9859bba88d8b0dad1608ed7c24 133 Gene3D G3DSA:3.10.180.10 1 126 3.8E-29 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_15735 0e69bb9859bba88d8b0dad1608ed7c24 133 SUPERFAMILY SSF54593 4 129 1.28E-19 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_15735 0e69bb9859bba88d8b0dad1608ed7c24 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 2.2E-10 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ambt_19720 3ab4fbb24b043579415eb8a22506612b 316 Gene3D G3DSA:3.20.20.100 2 316 5.8E-87 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_19720 3ab4fbb24b043579415eb8a22506612b 316 SUPERFAMILY SSF51430 8 313 1.57E-65 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ambt_19720 3ab4fbb24b043579415eb8a22506612b 316 Pfam PF00248 Aldo/keto reductase family 11 303 1.3E-52 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain ambt_00800 5eaf0f4369b8cb94eb1a371565e37608 206 SUPERFAMILY SSF46689 10 68 8.98E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_00800 5eaf0f4369b8cb94eb1a371565e37608 206 Gene3D G3DSA:1.10.357.10 52 205 1.1E-35 T 13-10-2018 ambt_00800 5eaf0f4369b8cb94eb1a371565e37608 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ambt_00800 5eaf0f4369b8cb94eb1a371565e37608 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 7.4E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_00800 5eaf0f4369b8cb94eb1a371565e37608 206 Gene3D G3DSA:1.10.10.60 1 51 3.2E-22 T 13-10-2018 ambt_09435 8bddf62ab25b9417bbf0d7acf42db833 344 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 88 322 7.3E-25 T 13-10-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 ambt_09435 8bddf62ab25b9417bbf0d7acf42db833 344 SUPERFAMILY SSF56349 83 308 2.75E-49 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_09435 8bddf62ab25b9417bbf0d7acf42db833 344 Gene3D G3DSA:3.30.66.10 11 94 8.1E-25 T 13-10-2018 IPR035447 DNA topoisomerase I, N-terminal ambt_09435 8bddf62ab25b9417bbf0d7acf42db833 344 Gene3D G3DSA:3.90.15.10 118 238 2.7E-67 T 13-10-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 ambt_09435 8bddf62ab25b9417bbf0d7acf42db833 344 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 172 188 6.9E-8 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 ambt_09435 8bddf62ab25b9417bbf0d7acf42db833 344 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 150 164 6.9E-8 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 ambt_09435 8bddf62ab25b9417bbf0d7acf42db833 344 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 288 299 6.9E-8 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 ambt_09435 8bddf62ab25b9417bbf0d7acf42db833 344 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 127 146 6.9E-8 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 ambt_09435 8bddf62ab25b9417bbf0d7acf42db833 344 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 237 251 6.9E-8 T 13-10-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 ambt_09435 8bddf62ab25b9417bbf0d7acf42db833 344 SUPERFAMILY SSF55869 27 87 2.35E-17 T 13-10-2018 IPR035447 DNA topoisomerase I, N-terminal ambt_09435 8bddf62ab25b9417bbf0d7acf42db833 344 Gene3D G3DSA:1.10.132.120 95 322 2.7E-67 T 13-10-2018 ambt_02375 7f0284c62b750ce86da3d861c6d793c2 267 Pfam PF04338 Protein of unknown function, DUF481 53 266 5.3E-48 T 13-10-2018 IPR007433 Protein of unknown function DUF481 ambt_02880 91f1e754d7a3fb0d75822c9742f59637 174 Pfam PF03713 Domain of unknown function (DUF305) 92 153 4.3E-10 T 13-10-2018 IPR005183 Domain of unknown function DUF305 ambt_02880 91f1e754d7a3fb0d75822c9742f59637 174 Gene3D G3DSA:1.20.1260.10 83 168 2.4E-10 T 13-10-2018 IPR012347 Ferritin-like ambt_06355 40a03874c7c7a3b34de12e389a7ee454 89 Pfam PF05901 Excalibur calcium-binding domain 52 86 6.8E-12 T 13-10-2018 IPR008613 Excalibur calcium-binding domain ambt_06355 40a03874c7c7a3b34de12e389a7ee454 89 SMART SM00894 51 86 0.0045 T 13-10-2018 IPR008613 Excalibur calcium-binding domain ambt_03645 4b04cab787fc370ea5ceb623620ae13f 347 Gene3D G3DSA:3.40.50.2000 161 333 2.9E-53 T 13-10-2018 ambt_03645 4b04cab787fc370ea5ceb623620ae13f 347 Gene3D G3DSA:3.40.50.2000 12 343 2.9E-53 T 13-10-2018 ambt_03645 4b04cab787fc370ea5ceb623620ae13f 347 SUPERFAMILY SSF53756 2 347 4.03E-56 T 13-10-2018 ambt_03645 4b04cab787fc370ea5ceb623620ae13f 347 Pfam PF13439 Glycosyltransferase Family 4 12 161 2.8E-13 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ambt_03645 4b04cab787fc370ea5ceb623620ae13f 347 Pfam PF00534 Glycosyl transferases group 1 174 327 4.3E-23 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_17940 d983f848c8520fa85ef98ddb03c56c11 308 Gene3D G3DSA:3.90.850.10 92 308 3.2E-74 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_17940 d983f848c8520fa85ef98ddb03c56c11 308 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 97 303 4.1E-63 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ambt_17940 d983f848c8520fa85ef98ddb03c56c11 308 SUPERFAMILY SSF56529 85 305 7.2E-68 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_03405 a06f10bab063ee621d694ff59bb4e01a 108 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ambt_03405 a06f10bab063ee621d694ff59bb4e01a 108 SUPERFAMILY SSF54862 3 101 1.68E-24 T 13-10-2018 ambt_03405 a06f10bab063ee621d694ff59bb4e01a 108 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.3E-12 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ambt_03405 a06f10bab063ee621d694ff59bb4e01a 108 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.3E-12 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ambt_03405 a06f10bab063ee621d694ff59bb4e01a 108 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.3E-12 T 13-10-2018 IPR000813 7Fe ferredoxin GO:0009055 ambt_03405 a06f10bab063ee621d694ff59bb4e01a 108 Pfam PF00037 4Fe-4S binding domain 35 55 3.9E-5 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ambt_03405 a06f10bab063ee621d694ff59bb4e01a 108 Pfam PF11953 Domain of unknown function (DUF3470) 68 106 1.2E-17 T 13-10-2018 IPR022569 Ferredoxin, C-terminal ambt_03405 a06f10bab063ee621d694ff59bb4e01a 108 Gene3D G3DSA:3.30.70.20 2 101 1.4E-26 T 13-10-2018 ambt_14990 0398be79d73957b0f1c633bf36762be1 447 SUPERFAMILY SSF53649 56 426 1.45E-76 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ambt_14990 0398be79d73957b0f1c633bf36762be1 447 Gene3D G3DSA:3.40.720.10 66 429 1.1E-101 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ambt_14990 0398be79d73957b0f1c633bf36762be1 447 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 66 385 3.0E-64 T 13-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 ambt_14990 0398be79d73957b0f1c633bf36762be1 447 Gene3D G3DSA:3.30.1360.180 282 383 1.1E-101 T 13-10-2018 ambt_04130 73b51f23bca6e19e597a3469b0024922 518 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 4 507 3.7E-135 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ambt_04130 73b51f23bca6e19e597a3469b0024922 518 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 475 19.857 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ambt_04130 73b51f23bca6e19e597a3469b0024922 518 Pfam PF03023 MviN-like protein 30 470 2.8E-144 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ambt_04130 73b51f23bca6e19e597a3469b0024922 518 PRINTS PR01806 Virulence factor MviN signature 166 187 1.3E-78 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ambt_04130 73b51f23bca6e19e597a3469b0024922 518 PRINTS PR01806 Virulence factor MviN signature 366 385 1.3E-78 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ambt_04130 73b51f23bca6e19e597a3469b0024922 518 PRINTS PR01806 Virulence factor MviN signature 35 54 1.3E-78 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ambt_04130 73b51f23bca6e19e597a3469b0024922 518 PRINTS PR01806 Virulence factor MviN signature 142 166 1.3E-78 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ambt_04130 73b51f23bca6e19e597a3469b0024922 518 PRINTS PR01806 Virulence factor MviN signature 268 294 1.3E-78 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ambt_04130 73b51f23bca6e19e597a3469b0024922 518 PRINTS PR01806 Virulence factor MviN signature 54 70 1.3E-78 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ambt_04130 73b51f23bca6e19e597a3469b0024922 518 PRINTS PR01806 Virulence factor MviN signature 417 434 1.3E-78 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ambt_04130 73b51f23bca6e19e597a3469b0024922 518 PIRSF PIRSF002869 2 516 4.4E-152 T 13-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ambt_03925 62d2c49a579daa248b2afe41f33db76f 418 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 133 402 3.9E-67 T 13-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 ambt_03925 62d2c49a579daa248b2afe41f33db76f 418 SUPERFAMILY SSF101960 15 412 9.81E-86 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ambt_03925 62d2c49a579daa248b2afe41f33db76f 418 Pfam PF01458 Uncharacterized protein family (UPF0051) 166 387 1.4E-53 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ambt_09575 ba14d702486d83cf04ee41a24b9e42d1 320 PIRSF PIRSF005963 1 320 5.6E-130 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ambt_09575 ba14d702486d83cf04ee41a24b9e42d1 320 SUPERFAMILY SSF102114 52 313 7.19E-65 T 13-10-2018 ambt_09575 ba14d702486d83cf04ee41a24b9e42d1 320 Hamap MF_00206 Lipoyl synthase [lipA]. 1 320 153.006 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ambt_09575 ba14d702486d83cf04ee41a24b9e42d1 320 Gene3D G3DSA:3.20.20.70 51 291 1.7E-20 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_09575 ba14d702486d83cf04ee41a24b9e42d1 320 SMART SM00729 83 292 1.7E-13 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ambt_09575 ba14d702486d83cf04ee41a24b9e42d1 320 Pfam PF04055 Radical SAM superfamily 90 250 7.3E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ambt_09575 ba14d702486d83cf04ee41a24b9e42d1 320 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 28 72 1.6E-8 T 13-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ambt_09575 ba14d702486d83cf04ee41a24b9e42d1 320 TIGRFAM TIGR00510 lipA: lipoyl synthase 22 319 3.7E-141 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ambt_07680 4b714ad7ac8686a41f10bac22ea2f8ac 248 Gene3D G3DSA:3.40.50.720 2 247 5.1E-68 T 13-10-2018 ambt_07680 4b714ad7ac8686a41f10bac22ea2f8ac 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.0E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_07680 4b714ad7ac8686a41f10bac22ea2f8ac 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 2.0E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_07680 4b714ad7ac8686a41f10bac22ea2f8ac 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.0E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_07680 4b714ad7ac8686a41f10bac22ea2f8ac 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 2.0E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_07680 4b714ad7ac8686a41f10bac22ea2f8ac 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.0E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_07680 4b714ad7ac8686a41f10bac22ea2f8ac 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_07680 4b714ad7ac8686a41f10bac22ea2f8ac 248 SUPERFAMILY SSF51735 11 242 9.95E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_07680 4b714ad7ac8686a41f10bac22ea2f8ac 248 Pfam PF00106 short chain dehydrogenase 14 210 6.1E-49 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_05045 7d9a533cbc70d0dd4fe4118e3f2a31c7 400 Pfam PF11890 Domain of unknown function (DUF3410) 306 383 5.7E-11 T 13-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 ambt_05045 7d9a533cbc70d0dd4fe4118e3f2a31c7 400 Gene3D G3DSA:3.30.1370.170 298 399 1.0E-9 T 13-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 ambt_05045 7d9a533cbc70d0dd4fe4118e3f2a31c7 400 Gene3D G3DSA:3.40.50.720 1 277 1.1E-99 T 13-10-2018 ambt_05045 7d9a533cbc70d0dd4fe4118e3f2a31c7 400 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 31 281 5.2E-16 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ambt_05045 7d9a533cbc70d0dd4fe4118e3f2a31c7 400 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 256 4.0E-27 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ambt_05045 7d9a533cbc70d0dd4fe4118e3f2a31c7 400 SUPERFAMILY SSF51735 92 257 1.44E-28 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_05045 7d9a533cbc70d0dd4fe4118e3f2a31c7 400 SUPERFAMILY SSF52283 5 102 2.0E-16 T 13-10-2018 ambt_05045 7d9a533cbc70d0dd4fe4118e3f2a31c7 400 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 380 39.511 T 13-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 ambt_05045 7d9a533cbc70d0dd4fe4118e3f2a31c7 400 Gene3D G3DSA:3.40.50.720 93 257 1.1E-99 T 13-10-2018 ambt_06595 73a029e3906a652070cff839ef7ba4ca 131 Pfam PF12514 Protein of unknown function (DUF3718) 33 99 4.1E-20 T 13-10-2018 IPR022193 Protein of unknown function DUF3718 ambt_07160 85223eac020cfe51a4a6bc3fe0a4889c 586 Gene3D G3DSA:1.25.40.10 93 331 6.2E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_07160 85223eac020cfe51a4a6bc3fe0a4889c 586 SUPERFAMILY SSF81901 135 276 7.32E-10 T 13-10-2018 ambt_20110 be5399b60bdb6dbb04139cbff064c6eb 253 Pfam PF01925 Sulfite exporter TauE/SafE 11 242 1.4E-19 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ambt_16345 f3d44df36c8cc1c1efe3e1636328bd49 271 SMART SM00342 186 269 4.8E-28 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_16345 f3d44df36c8cc1c1efe3e1636328bd49 271 SUPERFAMILY SSF51182 15 74 6.43E-6 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_16345 f3d44df36c8cc1c1efe3e1636328bd49 271 Pfam PF12833 Helix-turn-helix domain 192 271 4.8E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ambt_16345 f3d44df36c8cc1c1efe3e1636328bd49 271 Gene3D G3DSA:1.10.10.60 166 271 6.4E-24 T 13-10-2018 ambt_16345 f3d44df36c8cc1c1efe3e1636328bd49 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 265 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ambt_16345 f3d44df36c8cc1c1efe3e1636328bd49 271 SUPERFAMILY SSF46689 222 271 2.78E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_10220 cfb8700e2e7bf7206bb8259527bfd6f9 377 PIRSF PIRSF000898 47 373 2.9E-85 T 13-10-2018 IPR024927 Purple acid phosphatase GO:0003993 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348|Reactome: R-HSA-196843 ambt_10220 cfb8700e2e7bf7206bb8259527bfd6f9 377 Pfam PF00149 Calcineurin-like phosphoesterase 89 297 4.4E-18 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ambt_10220 cfb8700e2e7bf7206bb8259527bfd6f9 377 SUPERFAMILY SSF56300 89 365 7.94E-56 T 13-10-2018 ambt_10220 cfb8700e2e7bf7206bb8259527bfd6f9 377 Gene3D G3DSA:3.60.21.10 84 372 3.7E-91 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like ambt_12630 91b763ecfb8ee4e54b067a67ceb77382 116 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 10 106 1.1E-45 T 13-10-2018 IPR004480 Monothiol glutaredoxin-related ambt_12630 91b763ecfb8ee4e54b067a67ceb77382 116 SUPERFAMILY SSF52833 8 107 1.05E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_12630 91b763ecfb8ee4e54b067a67ceb77382 116 Pfam PF00462 Glutaredoxin 22 86 6.8E-18 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ambt_12630 91b763ecfb8ee4e54b067a67ceb77382 116 Gene3D G3DSA:3.40.30.10 7 113 2.7E-31 T 13-10-2018 ambt_12630 91b763ecfb8ee4e54b067a67ceb77382 116 PIRSF PIRSF005894 3 113 1.2E-50 T 13-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 ambt_13125 b0b8c6f651fa555e2c267dffab3827c0 215 SMART SM00947 27 195 1.1E-65 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ambt_13125 b0b8c6f651fa555e2c267dffab3827c0 215 Gene3D G3DSA:3.40.1050.10 1 204 3.6E-71 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ambt_13125 b0b8c6f651fa555e2c267dffab3827c0 215 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ambt_13125 b0b8c6f651fa555e2c267dffab3827c0 215 SUPERFAMILY SSF53056 1 210 4.84E-66 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ambt_13125 b0b8c6f651fa555e2c267dffab3827c0 215 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 13-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ambt_13125 b0b8c6f651fa555e2c267dffab3827c0 215 Pfam PF00484 Carbonic anhydrase 35 191 3.3E-51 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ambt_08815 589415afb4801de1650a448ebd8b7350 446 Pfam PF12040 Domain of unknown function (DUF3526) 278 424 2.1E-34 T 13-10-2018 IPR021913 Protein of unknown function DUF3526 ambt_09355 cc475c78be6b095119d24cd3ead743f0 383 SUPERFAMILY SSF52317 78 383 8.47E-14 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_18630 afa839e6f0e1bee50f4cef82a43d226f 671 Gene3D G3DSA:1.10.10.160 108 181 1.0E-93 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily ambt_18630 afa839e6f0e1bee50f4cef82a43d226f 671 Gene3D G3DSA:1.10.486.10 377 540 4.0E-120 T 13-10-2018 ambt_18630 afa839e6f0e1bee50f4cef82a43d226f 671 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 669 39.418 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 ambt_18630 afa839e6f0e1bee50f4cef82a43d226f 671 Pfam PF13361 UvrD-like helicase C-terminal domain 271 614 3.2E-67 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ambt_18630 afa839e6f0e1bee50f4cef82a43d226f 671 SUPERFAMILY SSF52540 1 635 1.45E-159 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_18630 afa839e6f0e1bee50f4cef82a43d226f 671 Gene3D G3DSA:3.40.50.300 4 266 1.0E-93 T 13-10-2018 ambt_18630 afa839e6f0e1bee50f4cef82a43d226f 671 Gene3D G3DSA:3.40.50.300 275 633 4.0E-120 T 13-10-2018 ambt_18630 afa839e6f0e1bee50f4cef82a43d226f 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 6.1E-76 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ambt_18630 afa839e6f0e1bee50f4cef82a43d226f 671 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 668 0.0 T 13-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 ambt_20120 24c3ef05eb1daedf75c407eda4ae2253 544 Gene3D G3DSA:1.20.1730.10 5 538 7.0E-116 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily ambt_20120 24c3ef05eb1daedf75c407eda4ae2253 544 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 443 6.3E-83 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_20120 24c3ef05eb1daedf75c407eda4ae2253 544 Pfam PF00474 Sodium:solute symporter family 35 435 2.5E-48 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_21120 8947bfe478625a6fba54205873ad1d80 199 Pfam PF01292 Prokaryotic cytochrome b561 34 199 3.1E-28 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ambt_21120 8947bfe478625a6fba54205873ad1d80 199 SUPERFAMILY SSF81342 31 199 4.87E-28 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ambt_07495 59574603046194ae0526c30cb7c7cc7f 64 Gene3D G3DSA:2.20.25.10 10 64 6.0E-20 T 13-10-2018 ambt_07495 59574603046194ae0526c30cb7c7cc7f 64 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 3 56 24.221 T 13-10-2018 IPR038053 Uncharacterised protein family UPF0434 ambt_07495 59574603046194ae0526c30cb7c7cc7f 64 Pfam PF03966 Trm112p-like protein 4 43 2.4E-9 T 13-10-2018 IPR005651 Trm112-like ambt_07495 59574603046194ae0526c30cb7c7cc7f 64 SUPERFAMILY SSF158997 1 55 3.53E-18 T 13-10-2018 ambt_09960 21e9be695a772992b78170ef0e18aa80 205 Pfam PF02223 Thymidylate kinase 8 196 1.9E-50 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 ambt_09960 21e9be695a772992b78170ef0e18aa80 205 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 13-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ambt_09960 21e9be695a772992b78170ef0e18aa80 205 SUPERFAMILY SSF52540 1 204 4.87E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_09960 21e9be695a772992b78170ef0e18aa80 205 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 196 8.4E-59 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ambt_09960 21e9be695a772992b78170ef0e18aa80 205 Hamap MF_00165 Thymidylate kinase [tmk]. 4 204 26.884 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ambt_09960 21e9be695a772992b78170ef0e18aa80 205 Gene3D G3DSA:3.40.50.300 1 205 3.3E-62 T 13-10-2018 ambt_01485 4c8a424b27e7b836bdb5488d7818c2ac 469 Gene3D G3DSA:3.10.20.70 2 104 1.0E-39 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ambt_01485 4c8a424b27e7b836bdb5488d7818c2ac 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ambt_01485 4c8a424b27e7b836bdb5488d7818c2ac 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 95 6.0E-31 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ambt_01485 4c8a424b27e7b836bdb5488d7818c2ac 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 13-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ambt_01485 4c8a424b27e7b836bdb5488d7818c2ac 469 SUPERFAMILY SSF54368 3 100 2.88E-34 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ambt_01485 4c8a424b27e7b836bdb5488d7818c2ac 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 5 468 2.2E-210 T 13-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ambt_01485 4c8a424b27e7b836bdb5488d7818c2ac 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 5.4E-138 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ambt_01485 4c8a424b27e7b836bdb5488d7818c2ac 469 Gene3D G3DSA:3.30.590.10 105 457 2.4E-147 T 13-10-2018 ambt_01485 4c8a424b27e7b836bdb5488d7818c2ac 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ambt_01485 4c8a424b27e7b836bdb5488d7818c2ac 469 SMART SM01230 102 379 1.1E-150 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ambt_01485 4c8a424b27e7b836bdb5488d7818c2ac 469 SUPERFAMILY SSF55931 102 468 4.02E-137 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ambt_08030 26781f582e6a04224a5e0ee7aa3b6a0b 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 2.7E-10 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ambt_08030 26781f582e6a04224a5e0ee7aa3b6a0b 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 2.7E-10 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ambt_08030 26781f582e6a04224a5e0ee7aa3b6a0b 444 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 2.7E-10 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ambt_08030 26781f582e6a04224a5e0ee7aa3b6a0b 444 SUPERFAMILY SSF161070 4 443 2.35E-116 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 ambt_08030 26781f582e6a04224a5e0ee7aa3b6a0b 444 Pfam PF00209 Sodium:neurotransmitter symporter family 4 120 2.3E-21 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ambt_08030 26781f582e6a04224a5e0ee7aa3b6a0b 444 Pfam PF00209 Sodium:neurotransmitter symporter family 138 443 2.9E-24 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 ambt_09590 7c85ab63c1703c3416db6ae95d9ed59e 280 Pfam PF10977 Protein of unknown function (DUF2797) 40 275 1.2E-91 T 13-10-2018 IPR021246 Protein of unknown function DUF2797 ambt_05360 324992dafda83e2a82b8ebca077786de 359 Gene3D G3DSA:1.10.3290.10 21 277 8.1E-44 T 13-10-2018 IPR036597 Fido-like domain superfamily ambt_05360 324992dafda83e2a82b8ebca077786de 359 PIRSF PIRSF038925 1 358 4.5E-107 T 13-10-2018 IPR026287 Adenosine monophosphate-protein transferase ambt_05360 324992dafda83e2a82b8ebca077786de 359 Pfam PF13784 Fic/DOC family N-terminal 22 103 6.2E-24 T 13-10-2018 IPR025758 Fic/DOC N-terminal ambt_05360 324992dafda83e2a82b8ebca077786de 359 SUPERFAMILY SSF140931 89 278 4.19E-35 T 13-10-2018 IPR036597 Fido-like domain superfamily ambt_05360 324992dafda83e2a82b8ebca077786de 359 Pfam PF02661 Fic/DOC family 113 211 1.2E-19 T 13-10-2018 IPR003812 Fido domain ambt_05360 324992dafda83e2a82b8ebca077786de 359 SUPERFAMILY SSF46785 295 347 6.83E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_18045 7f888fcc5f54c382e567a7ae7df695ce 311 Gene3D G3DSA:2.40.230.10 45 310 4.0E-83 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_18045 7f888fcc5f54c382e567a7ae7df695ce 311 PRINTS PR01486 Bacterial phospholipase A1 protein signature 225 243 2.6E-28 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_18045 7f888fcc5f54c382e567a7ae7df695ce 311 PRINTS PR01486 Bacterial phospholipase A1 protein signature 280 300 2.6E-28 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_18045 7f888fcc5f54c382e567a7ae7df695ce 311 PRINTS PR01486 Bacterial phospholipase A1 protein signature 139 158 2.6E-28 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_18045 7f888fcc5f54c382e567a7ae7df695ce 311 PRINTS PR01486 Bacterial phospholipase A1 protein signature 93 110 2.6E-28 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_18045 7f888fcc5f54c382e567a7ae7df695ce 311 PRINTS PR01486 Bacterial phospholipase A1 protein signature 258 275 2.6E-28 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_18045 7f888fcc5f54c382e567a7ae7df695ce 311 Pfam PF02253 Phospholipase A1 46 307 2.0E-91 T 13-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_18045 7f888fcc5f54c382e567a7ae7df695ce 311 SUPERFAMILY SSF56931 47 309 7.45E-84 T 13-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 ambt_18900 97959faf4c621e8b4d68f889072ba580 345 SUPERFAMILY SSF52540 3 216 1.54E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15430 5a0f8e99bd583614b27c19025b79824a 200 Gene3D G3DSA:2.30.30.40 40 92 6.8E-9 T 13-10-2018 ambt_15430 5a0f8e99bd583614b27c19025b79824a 200 PIRSF PIRSF006158 1 200 4.3E-51 T 13-10-2018 IPR016476 SH3 domain protein ambt_15430 5a0f8e99bd583614b27c19025b79824a 200 SMART SM00287 29 95 1.2E-8 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type ambt_15430 5a0f8e99bd583614b27c19025b79824a 200 Pfam PF08239 Bacterial SH3 domain 42 91 6.4E-11 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type ambt_15430 5a0f8e99bd583614b27c19025b79824a 200 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 33 199 1.1E-47 T 13-10-2018 IPR016476 SH3 domain protein ambt_03170 1236e596e6591dc977c11aa5d99ce888 423 SUPERFAMILY SSF51556 42 417 2.78E-86 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_03170 1236e596e6591dc977c11aa5d99ce888 423 Gene3D G3DSA:3.20.20.140 43 420 6.7E-128 T 13-10-2018 ambt_03170 1236e596e6591dc977c11aa5d99ce888 423 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 48 410 1.8E-94 T 13-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 ambt_14215 95d2e789a17070db220f7ad0c780cfc6 170 ProSitePatterns PS00018 EF-hand calcium-binding domain. 44 56 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_14215 95d2e789a17070db220f7ad0c780cfc6 170 Gene3D G3DSA:1.10.238.10 16 74 3.3E-6 T 13-10-2018 ambt_16330 d9f09b1243e0ad1b328c38126d29c99f 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 13-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 ambt_16330 d9f09b1243e0ad1b328c38126d29c99f 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 ambt_16330 d9f09b1243e0ad1b328c38126d29c99f 112 Gene3D G3DSA:3.30.70.120 1 112 6.8E-47 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ambt_16330 d9f09b1243e0ad1b328c38126d29c99f 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.5E-43 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_16330 d9f09b1243e0ad1b328c38126d29c99f 112 SUPERFAMILY SSF54913 1 112 2.54E-45 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta ambt_16330 d9f09b1243e0ad1b328c38126d29c99f 112 SMART SM00938 4 105 8.5E-67 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_16330 d9f09b1243e0ad1b328c38126d29c99f 112 PIRSF PIRSF039144 1 112 1.7E-55 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_16330 d9f09b1243e0ad1b328c38126d29c99f 112 PRINTS PR00340 P-II protein signature 23 41 9.5E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_16330 d9f09b1243e0ad1b328c38126d29c99f 112 PRINTS PR00340 P-II protein signature 83 103 9.5E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_16330 d9f09b1243e0ad1b328c38126d29c99f 112 PRINTS PR00340 P-II protein signature 52 75 9.5E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_16330 d9f09b1243e0ad1b328c38126d29c99f 112 PRINTS PR00340 P-II protein signature 2 17 9.5E-44 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ambt_19465 96bd042c88dd4e222b8a4a31ff608211 60 SUPERFAMILY SSF46955 3 52 1.95E-5 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily ambt_19465 96bd042c88dd4e222b8a4a31ff608211 60 Pfam PF13411 MerR HTH family regulatory protein 4 52 4.2E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_19465 96bd042c88dd4e222b8a4a31ff608211 60 Gene3D G3DSA:1.10.1660.10 2 59 8.9E-7 T 13-10-2018 ambt_04440 605daeaee97730cf137bc1fab88c2a75 191 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 6 176 1.1E-13 T 13-10-2018 IPR003111 Lon, substrate-binding domain ambt_04440 605daeaee97730cf137bc1fab88c2a75 191 SUPERFAMILY SSF88697 5 190 2.24E-43 T 13-10-2018 IPR015947 PUA-like superfamily ambt_04440 605daeaee97730cf137bc1fab88c2a75 191 Gene3D G3DSA:2.30.130.40 3 113 1.1E-26 T 13-10-2018 ambt_06455 5b53fe8c32091e29c52cd4596cd92b15 247 SUPERFAMILY SSF53474 33 229 2.54E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_06455 5b53fe8c32091e29c52cd4596cd92b15 247 Gene3D G3DSA:3.40.50.1820 30 235 8.9E-30 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_14130 8d4a8d7a63b9d1d7d5e68a4d923460a7 854 Pfam PF15615 TerB-C domain 722 852 1.4E-27 T 13-10-2018 IPR028932 TerB-C domain ambt_14130 8d4a8d7a63b9d1d7d5e68a4d923460a7 854 Pfam PF05099 Tellurite resistance protein TerB 604 708 4.9E-7 T 13-10-2018 IPR007791 Co-chaperone DjlA, N-terminal ambt_14130 8d4a8d7a63b9d1d7d5e68a4d923460a7 854 Pfam PF13208 TerB N-terminal domain 190 395 1.1E-44 T 13-10-2018 IPR025266 TerB, N-terminal ambt_14130 8d4a8d7a63b9d1d7d5e68a4d923460a7 854 SUPERFAMILY SSF158682 601 715 3.53E-16 T 13-10-2018 IPR029024 TerB-like ambt_14130 8d4a8d7a63b9d1d7d5e68a4d923460a7 854 Gene3D G3DSA:1.10.3680.10 594 711 4.1E-13 T 13-10-2018 IPR029024 TerB-like ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 Pfam PF01019 Gamma-glutamyltranspeptidase 67 580 3.9E-151 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 SUPERFAMILY SSF56235 45 584 6.37E-164 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 Gene3D G3DSA:1.10.246.130 284 406 3.8E-33 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 3.9E-64 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 166 185 3.9E-64 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 3.9E-64 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 298 317 3.9E-64 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 488 505 3.9E-64 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 268 284 3.9E-64 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 3.9E-64 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 148 166 3.9E-64 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 74 99 3.9E-64 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 Gene3D G3DSA:3.60.20.40 407 585 5.0E-60 T 13-10-2018 ambt_09035 201848a41733a3d4c2ae20f92dd74afc 585 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 53 577 3.2E-126 T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 ambt_11290 3fb13de2af0f00f4dc28ae294276d763 630 Pfam PF01757 Acyltransferase family 5 315 3.5E-29 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ambt_11290 3fb13de2af0f00f4dc28ae294276d763 630 SUPERFAMILY SSF52266 542 614 4.4E-5 T 13-10-2018 ambt_17460 bea2bf3402b134e759f0b203abc500cd 172 Pfam PF01569 PAP2 superfamily 61 167 1.7E-22 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ambt_17460 bea2bf3402b134e759f0b203abc500cd 172 SUPERFAMILY SSF48317 5 170 5.89E-40 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ambt_17460 bea2bf3402b134e759f0b203abc500cd 172 Gene3D G3DSA:1.20.144.10 20 172 3.7E-22 T 13-10-2018 ambt_17460 bea2bf3402b134e759f0b203abc500cd 172 SMART SM00014 59 168 4.2E-17 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ambt_11310 e99d2f625165890fbac3c0c8779dafba 338 Gene3D G3DSA:3.90.550.10 2 202 1.5E-27 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_11310 e99d2f625165890fbac3c0c8779dafba 338 Pfam PF00535 Glycosyl transferase family 2 11 152 5.8E-10 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_11310 e99d2f625165890fbac3c0c8779dafba 338 SUPERFAMILY SSF53448 4 279 2.16E-33 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_00545 a779f87bc06837ec38967d0c9b980677 124 Gene3D G3DSA:2.30.29.50 1 124 3.7E-47 T 13-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily ambt_00545 a779f87bc06837ec38967d0c9b980677 124 SUPERFAMILY SSF50729 7 122 3.38E-39 T 13-10-2018 ambt_00545 a779f87bc06837ec38967d0c9b980677 124 Pfam PF08000 Bacterial PH domain 3 120 3.0E-44 T 13-10-2018 IPR012544 Bacterial Pleckstrin homology domain ambt_15175 43f8bca6882ff7ca4520f60965f0f24a 117 Pfam PF13806 Rieske-like [2Fe-2S] domain 11 115 1.5E-33 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 ambt_15175 43f8bca6882ff7ca4520f60965f0f24a 117 Gene3D G3DSA:2.102.10.10 6 117 2.4E-29 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_15175 43f8bca6882ff7ca4520f60965f0f24a 117 SUPERFAMILY SSF50022 11 117 1.52E-29 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_15175 43f8bca6882ff7ca4520f60965f0f24a 117 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 11 116 2.6E-31 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 ambt_00525 759c9547ac5161731cea351b3716952b 213 SUPERFAMILY SSF56281 7 203 3.79E-53 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_00525 759c9547ac5161731cea351b3716952b 213 SMART SM00849 12 192 4.4E-37 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_00525 759c9547ac5161731cea351b3716952b 213 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 1.5E-28 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_00525 759c9547ac5161731cea351b3716952b 213 Gene3D G3DSA:3.60.15.10 1 209 4.3E-76 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_13835 a0dc7546fce784cc6610b07794ee3313 289 Gene3D G3DSA:3.90.550.10 5 205 4.1E-12 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_13835 a0dc7546fce784cc6610b07794ee3313 289 SUPERFAMILY SSF53448 5 229 2.89E-18 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_13835 a0dc7546fce784cc6610b07794ee3313 289 Pfam PF00535 Glycosyl transferase family 2 24 104 6.1E-5 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_09225 c68094ddc5cb8f751fa2258c6edb6ab6 135 Gene3D G3DSA:2.20.25.10 1 33 3.1E-7 T 13-10-2018 ambt_09225 c68094ddc5cb8f751fa2258c6edb6ab6 135 SUPERFAMILY SSF82784 1 130 9.03E-37 T 13-10-2018 IPR036102 OsmC/Ohr superfamily ambt_09225 c68094ddc5cb8f751fa2258c6edb6ab6 135 Pfam PF02566 OsmC-like protein 27 125 9.2E-20 T 13-10-2018 IPR003718 OsmC/Ohr family ambt_09225 c68094ddc5cb8f751fa2258c6edb6ab6 135 Gene3D G3DSA:3.30.300.20 34 130 1.1E-28 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta ambt_15800 eda09b69dee0991e397507f8e0f947f1 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 5.7E-177 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ambt_15800 eda09b69dee0991e397507f8e0f947f1 432 SUPERFAMILY SSF52540 3 430 4.57E-178 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15800 eda09b69dee0991e397507f8e0f947f1 432 Gene3D G3DSA:1.10.300.10 102 201 4.4E-103 T 13-10-2018 ambt_15800 eda09b69dee0991e397507f8e0f947f1 432 Gene3D G3DSA:3.90.170.10 267 432 9.4E-69 T 13-10-2018 ambt_15800 eda09b69dee0991e397507f8e0f947f1 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ambt_15800 eda09b69dee0991e397507f8e0f947f1 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 215.652 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ambt_15800 eda09b69dee0991e397507f8e0f947f1 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 2.2E-191 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ambt_15800 eda09b69dee0991e397507f8e0f947f1 432 SMART SM00788 4 425 3.4E-295 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ambt_15800 eda09b69dee0991e397507f8e0f947f1 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 13-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ambt_15800 eda09b69dee0991e397507f8e0f947f1 432 Gene3D G3DSA:3.40.440.10 6 249 4.4E-103 T 13-10-2018 ambt_13815 71ea04b65236ed0c91d7e2d07bc8344e 552 Gene3D G3DSA:1.10.3210.10 287 531 5.7E-8 T 13-10-2018 ambt_13815 71ea04b65236ed0c91d7e2d07bc8344e 552 SUPERFAMILY SSF109604 288 540 3.14E-8 T 13-10-2018 ambt_02635 f242aedb1182f1bde9df6e457ce94a59 414 Pfam PF06119 Nidogen-like 139 231 1.3E-12 T 13-10-2018 IPR003886 NIDO domain GO:0007160 ambt_11990 7cad0da4e4939655fb5f919defa84d4f 223 Gene3D G3DSA:1.10.357.10 68 201 7.7E-6 T 13-10-2018 ambt_11990 7cad0da4e4939655fb5f919defa84d4f 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 1.2E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_11990 7cad0da4e4939655fb5f919defa84d4f 223 Gene3D G3DSA:1.10.10.60 18 67 3.7E-10 T 13-10-2018 ambt_11990 7cad0da4e4939655fb5f919defa84d4f 223 SUPERFAMILY SSF46689 13 84 1.28E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_19570 2805bad200e70fdebafb43a4dd8f495e 367 Pfam PF00571 CBS domain 205 252 0.0072 T 13-10-2018 IPR000644 CBS domain ambt_19570 2805bad200e70fdebafb43a4dd8f495e 367 Pfam PF00571 CBS domain 266 315 8.3E-8 T 13-10-2018 IPR000644 CBS domain ambt_19570 2805bad200e70fdebafb43a4dd8f495e 367 Pfam PF01595 Domain of unknown function DUF21 9 177 7.0E-28 T 13-10-2018 IPR002550 CNNM, transmembrane domain ambt_19570 2805bad200e70fdebafb43a4dd8f495e 367 SUPERFAMILY SSF54631 184 318 1.1E-25 T 13-10-2018 ambt_19570 2805bad200e70fdebafb43a4dd8f495e 367 Gene3D G3DSA:3.10.580.10 174 327 7.0E-34 T 13-10-2018 ambt_05850 c3584f3a0400af64cb09b13b00b01bf2 731 SUPERFAMILY SSF51445 167 724 2.47E-141 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_05850 c3584f3a0400af64cb09b13b00b01bf2 731 Pfam PF02446 4-alpha-glucanotransferase 184 703 7.1E-122 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 ambt_05850 c3584f3a0400af64cb09b13b00b01bf2 731 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 135 722 2.5E-185 T 13-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 ambt_05850 c3584f3a0400af64cb09b13b00b01bf2 731 Gene3D G3DSA:3.20.20.80 177 723 3.0E-115 T 13-10-2018 ambt_19955 fa17b651f68a4e4a356473f5972d0c09 191 Gene3D G3DSA:1.10.10.10 130 189 4.0E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_19955 fa17b651f68a4e4a356473f5972d0c09 191 Pfam PF08281 Sigma-70, region 4 131 182 1.0E-13 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ambt_19955 fa17b651f68a4e4a356473f5972d0c09 191 SUPERFAMILY SSF88659 130 186 1.72E-12 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ambt_19955 fa17b651f68a4e4a356473f5972d0c09 191 Pfam PF04542 Sigma-70 region 2 38 104 8.9E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_19955 fa17b651f68a4e4a356473f5972d0c09 191 Gene3D G3DSA:1.10.1740.10 12 129 1.2E-27 T 13-10-2018 ambt_19955 fa17b651f68a4e4a356473f5972d0c09 191 SUPERFAMILY SSF88946 17 120 2.75E-27 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_19955 fa17b651f68a4e4a356473f5972d0c09 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 34 184 4.7E-27 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_20755 a1b53699e7f3e2d82120c8b494505638 60 SUPERFAMILY SSF46955 5 57 1.23E-5 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily ambt_20755 a1b53699e7f3e2d82120c8b494505638 60 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 4 54 1.4E-19 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA ambt_20755 a1b53699e7f3e2d82120c8b494505638 60 Gene3D G3DSA:1.10.238.160 4 59 3.6E-6 T 13-10-2018 ambt_13280 b8eb215e6fa9d64c2b588a170b1b9106 261 Pfam PF02108 Flagellar assembly protein FliH 122 247 3.9E-33 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE ambt_13280 b8eb215e6fa9d64c2b588a170b1b9106 261 PRINTS PR01003 Flagellar assembly protein FliH signature 81 103 5.3E-8 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 ambt_13280 b8eb215e6fa9d64c2b588a170b1b9106 261 PRINTS PR01003 Flagellar assembly protein FliH signature 143 160 5.3E-8 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 ambt_13280 b8eb215e6fa9d64c2b588a170b1b9106 261 PRINTS PR01003 Flagellar assembly protein FliH signature 213 229 5.3E-8 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 ambt_13280 b8eb215e6fa9d64c2b588a170b1b9106 261 PRINTS PR01003 Flagellar assembly protein FliH signature 104 122 5.3E-8 T 13-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 ambt_06125 c1da5ce5a3d6693779ab1e711ae7209f 269 Gene3D G3DSA:3.40.1010.10 1 125 1.5E-16 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ambt_06125 c1da5ce5a3d6693779ab1e711ae7209f 269 SUPERFAMILY SSF53790 6 241 9.16E-25 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ambt_06125 c1da5ce5a3d6693779ab1e711ae7209f 269 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 155 2.5E-19 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ambt_17195 33cd93e075c5b64e6dbc406a3b485457 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 3.5E-10 T 13-10-2018 IPR003004 GspF/PilC family ambt_17195 33cd93e075c5b64e6dbc406a3b485457 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 3.5E-10 T 13-10-2018 IPR003004 GspF/PilC family ambt_17195 33cd93e075c5b64e6dbc406a3b485457 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 3.5E-10 T 13-10-2018 IPR003004 GspF/PilC family ambt_17195 33cd93e075c5b64e6dbc406a3b485457 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 3.5E-10 T 13-10-2018 IPR003004 GspF/PilC family ambt_17195 33cd93e075c5b64e6dbc406a3b485457 408 Gene3D G3DSA:1.20.81.30 60 177 2.2E-27 T 13-10-2018 ambt_17195 33cd93e075c5b64e6dbc406a3b485457 408 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 6.8E-26 T 13-10-2018 IPR018076 Type II secretion system F domain ambt_17195 33cd93e075c5b64e6dbc406a3b485457 408 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 7.7E-26 T 13-10-2018 IPR018076 Type II secretion system F domain ambt_17195 33cd93e075c5b64e6dbc406a3b485457 408 Gene3D G3DSA:1.20.81.30 258 370 3.4E-27 T 13-10-2018 ambt_09125 76509e6ada076cb7dd019efdf115ef16 102 SUPERFAMILY SSF81296 14 99 2.9E-14 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_09125 76509e6ada076cb7dd019efdf115ef16 102 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 25 87 8.5E-7 T 13-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ambt_09125 76509e6ada076cb7dd019efdf115ef16 102 Gene3D G3DSA:2.60.40.10 3 100 5.2E-16 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_12895 8ca129f4a217640cfa30fe2962386f01 699 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 682 699 - T 13-10-2018 IPR010917 TonB-dependent receptor, conserved site ambt_12895 8ca129f4a217640cfa30fe2962386f01 699 Gene3D G3DSA:2.40.170.20 41 699 2.1E-102 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_12895 8ca129f4a217640cfa30fe2962386f01 699 Pfam PF00593 TonB dependent receptor 239 697 3.5E-26 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_12895 8ca129f4a217640cfa30fe2962386f01 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 152 9.9E-12 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_12895 8ca129f4a217640cfa30fe2962386f01 699 SUPERFAMILY SSF56935 25 699 2.07E-82 T 13-10-2018 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 Gene3D G3DSA:2.102.10.10 43 176 8.2E-96 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 202 415 1.8E-18 T 13-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 5.2E-29 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 5.2E-29 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 191 213 5.2E-29 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 5.2E-29 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 5.2E-29 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 27 52 5.2E-29 T 13-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 SUPERFAMILY SSF50022 10 168 1.22E-44 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 Pfam PF00355 Rieske [2Fe-2S] domain 43 129 1.9E-19 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 Gene3D G3DSA:3.90.380.10 20 415 8.2E-96 T 13-10-2018 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 86 109 - T 13-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 ambt_18005 14084a4635a557aa851b25583c6f8bf8 417 SUPERFAMILY SSF55961 177 415 1.57E-50 T 13-10-2018 ambt_06865 af32f8130da570911df425ab27308740 348 Gene3D G3DSA:3.90.180.10 15 345 1.5E-102 T 13-10-2018 ambt_06865 af32f8130da570911df425ab27308740 348 SUPERFAMILY SSF50129 5 186 1.31E-34 T 13-10-2018 IPR011032 GroES-like superfamily ambt_06865 af32f8130da570911df425ab27308740 348 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 179 200 - T 13-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 ambt_06865 af32f8130da570911df425ab27308740 348 Gene3D G3DSA:3.40.50.720 166 319 1.5E-102 T 13-10-2018 ambt_06865 af32f8130da570911df425ab27308740 348 Pfam PF00107 Zinc-binding dehydrogenase 190 310 7.6E-21 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ambt_06865 af32f8130da570911df425ab27308740 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 36 146 6.6E-12 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ambt_06865 af32f8130da570911df425ab27308740 348 SUPERFAMILY SSF51735 152 306 8.99E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_06865 af32f8130da570911df425ab27308740 348 SMART SM00829 17 346 2.9E-14 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ambt_06755 9c3a2b83ef2580773f5df46deb7327dd 438 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 24 434 1.9E-48 T 13-10-2018 IPR018721 Protein of unknown function DUF2252 ambt_21815 f082853483584b0bc9a2fe93e8d7dd46 604 Pfam PF07244 Surface antigen variable number repeat 207 274 7.2E-5 T 13-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 ambt_21815 f082853483584b0bc9a2fe93e8d7dd46 604 Pfam PF17243 POTRA domain TamA domain 1 46 115 6.3E-11 T 13-10-2018 IPR035243 TamA, POTRA domain 1 ambt_21815 f082853483584b0bc9a2fe93e8d7dd46 604 Gene3D G3DSA:3.10.20.310 207 282 5.8E-19 T 13-10-2018 ambt_21815 f082853483584b0bc9a2fe93e8d7dd46 604 Gene3D G3DSA:3.10.20.310 119 206 2.7E-14 T 13-10-2018 ambt_21815 f082853483584b0bc9a2fe93e8d7dd46 604 Gene3D G3DSA:2.40.160.50 283 604 9.3E-87 T 13-10-2018 ambt_21815 f082853483584b0bc9a2fe93e8d7dd46 604 Pfam PF01103 Surface antigen 296 587 1.1E-31 T 13-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 ambt_21815 f082853483584b0bc9a2fe93e8d7dd46 604 Gene3D G3DSA:3.10.20.310 42 118 2.7E-6 T 13-10-2018 ambt_05695 d5f3aa71f154707fd8e3f2c26a46753d 281 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ambt_05695 d5f3aa71f154707fd8e3f2c26a46753d 281 SUPERFAMILY SSF52096 4 244 8.22E-52 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ambt_05695 d5f3aa71f154707fd8e3f2c26a46753d 281 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 246 2.5E-28 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ambt_05695 d5f3aa71f154707fd8e3f2c26a46753d 281 Gene3D G3DSA:3.90.226.10 2 281 3.9E-66 T 13-10-2018 ambt_19865 349af90444ec7462c2f07b0462ecde78 319 SUPERFAMILY SSF52540 19 160 3.13E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_19865 349af90444ec7462c2f07b0462ecde78 319 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 18 319 30.636 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ambt_19865 349af90444ec7462c2f07b0462ecde78 319 Gene3D G3DSA:3.40.50.300 22 302 3.7E-107 T 13-10-2018 ambt_19865 349af90444ec7462c2f07b0462ecde78 319 Gene3D G3DSA:1.10.20.140 125 196 3.7E-107 T 13-10-2018 ambt_19865 349af90444ec7462c2f07b0462ecde78 319 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 18 303 1.2E-106 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ambt_19865 349af90444ec7462c2f07b0462ecde78 319 Pfam PF01715 IPP transferase 52 296 3.2E-85 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ambt_13555 be6fc0e0f70a61acf5ebc55e00495cee 645 Pfam PF16448 LapD/MoxY periplasmic domain 27 145 2.1E-32 T 13-10-2018 IPR032244 LapD/MoxY, periplasmic domain ambt_13555 be6fc0e0f70a61acf5ebc55e00495cee 645 Gene3D G3DSA:3.30.1040.50 101 150 3.7E-11 T 13-10-2018 ambt_13555 be6fc0e0f70a61acf5ebc55e00495cee 645 SUPERFAMILY SSF141868 412 631 1.83E-25 T 13-10-2018 IPR035919 EAL domain superfamily ambt_13555 be6fc0e0f70a61acf5ebc55e00495cee 645 Pfam PF00563 EAL domain 413 632 1.8E-25 T 13-10-2018 IPR001633 EAL domain ambt_13555 be6fc0e0f70a61acf5ebc55e00495cee 645 Gene3D G3DSA:3.20.20.450 406 635 3.1E-27 T 13-10-2018 IPR035919 EAL domain superfamily ambt_13555 be6fc0e0f70a61acf5ebc55e00495cee 645 SMART SM00052 405 637 2.0E-5 T 13-10-2018 IPR001633 EAL domain ambt_04850 12497eba0261b71d294939ca179d993a 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 4.0E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_04850 12497eba0261b71d294939ca179d993a 224 SUPERFAMILY SSF46689 3 75 3.17E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_04850 12497eba0261b71d294939ca179d993a 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 2.7E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_04850 12497eba0261b71d294939ca179d993a 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 2.7E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ambt_04850 12497eba0261b71d294939ca179d993a 224 Gene3D G3DSA:1.10.357.10 1 213 9.1E-42 T 13-10-2018 ambt_04850 12497eba0261b71d294939ca179d993a 224 Pfam PF13972 Bacterial transcriptional repressor 57 190 6.1E-24 T 13-10-2018 IPR025722 Bacterial transcriptional repressor TetR ambt_17275 643f38034567993ff1cc0ff5c6e511c3 480 Pfam PF00474 Sodium:solute symporter family 40 425 5.3E-36 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_17275 643f38034567993ff1cc0ff5c6e511c3 480 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 40 425 2.1E-62 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_17275 643f38034567993ff1cc0ff5c6e511c3 480 Gene3D G3DSA:1.20.1730.10 29 474 8.8E-95 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily ambt_15745 50f8e354c5941b43436fc1edf7a21659 229 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 12 188 1.1E-32 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT ambt_14265 93b13703cc53d6f225cf1e06f9a883b6 201 Gene3D G3DSA:3.30.70.240 135 195 4.8E-6 T 13-10-2018 ambt_14265 93b13703cc53d6f225cf1e06f9a883b6 201 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 13-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site ambt_14265 93b13703cc53d6f225cf1e06f9a883b6 201 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 190 2.2E-56 T 13-10-2018 IPR015796 Impact family, bacterial/archaeal ambt_14265 93b13703cc53d6f225cf1e06f9a883b6 201 SUPERFAMILY SSF54211 2 131 2.81E-43 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ambt_14265 93b13703cc53d6f225cf1e06f9a883b6 201 SUPERFAMILY SSF54980 138 187 5.04E-8 T 13-10-2018 IPR035647 EF-G domain III/V-like ambt_14265 93b13703cc53d6f225cf1e06f9a883b6 201 Pfam PF09186 Domain of unknown function (DUF1949) 141 187 1.9E-6 T 13-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal ambt_14265 93b13703cc53d6f225cf1e06f9a883b6 201 Gene3D G3DSA:3.30.230.30 1 133 2.2E-52 T 13-10-2018 IPR036956 Impact, N-terminal domain superfamily ambt_14265 93b13703cc53d6f225cf1e06f9a883b6 201 Pfam PF01205 Uncharacterized protein family UPF0029 17 124 7.2E-32 T 13-10-2018 IPR001498 Impact, N-terminal ambt_00165 efe5374017710d1d4bae1933947775aa 368 SUPERFAMILY SSF101898 33 340 9.68E-21 T 13-10-2018 ambt_00165 efe5374017710d1d4bae1933947775aa 368 Gene3D G3DSA:2.120.10.30 23 195 4.2E-7 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_00165 efe5374017710d1d4bae1933947775aa 368 Gene3D G3DSA:2.120.10.30 205 366 1.3E-7 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_04150 8dfb366e9c16582b5e0fdc56c1592b61 157 SUPERFAMILY SSF54534 10 146 1.22E-34 T 13-10-2018 ambt_04150 8dfb366e9c16582b5e0fdc56c1592b61 157 Gene3D G3DSA:2.40.10.330 75 131 1.8E-41 T 13-10-2018 ambt_04150 8dfb366e9c16582b5e0fdc56c1592b61 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 10 142 9.1E-13 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ambt_04150 8dfb366e9c16582b5e0fdc56c1592b61 157 Gene3D G3DSA:3.10.50.40 16 144 1.8E-41 T 13-10-2018 ambt_18425 707acec245764c3a7f7d8452f5b0c45b 771 SUPERFAMILY SSF56935 21 771 6.23E-101 T 13-10-2018 ambt_18425 707acec245764c3a7f7d8452f5b0c45b 771 Pfam PF00593 TonB dependent receptor 307 768 4.3E-30 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_18425 707acec245764c3a7f7d8452f5b0c45b 771 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 150 2.3E-15 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_18425 707acec245764c3a7f7d8452f5b0c45b 771 Gene3D G3DSA:2.170.130.10 19 159 1.7E-30 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_02560 63398a8c0a6a8fe19e29dfc2be8b621f 387 Pfam PF07690 Major Facilitator Superfamily 9 319 1.4E-42 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_02560 63398a8c0a6a8fe19e29dfc2be8b621f 387 PRINTS PR01035 Tetracycline resistance protein signature 40 59 8.9E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ambt_02560 63398a8c0a6a8fe19e29dfc2be8b621f 387 PRINTS PR01035 Tetracycline resistance protein signature 98 119 8.9E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ambt_02560 63398a8c0a6a8fe19e29dfc2be8b621f 387 PRINTS PR01035 Tetracycline resistance protein signature 10 26 8.9E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ambt_02560 63398a8c0a6a8fe19e29dfc2be8b621f 387 PRINTS PR01035 Tetracycline resistance protein signature 158 178 8.9E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ambt_02560 63398a8c0a6a8fe19e29dfc2be8b621f 387 SUPERFAMILY SSF103473 3 379 4.45E-65 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_02560 63398a8c0a6a8fe19e29dfc2be8b621f 387 Gene3D G3DSA:1.20.1250.20 3 377 4.7E-54 T 13-10-2018 ambt_20175 6cd11dcc3ba1d6c55bb330cd0ae4ed9f 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 6.7E-18 T 13-10-2018 IPR012994 Membrane bound YbgT-like ambt_20175 6cd11dcc3ba1d6c55bb330cd0ae4ed9f 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 6.7E-20 T 13-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 ambt_16440 0848f81df08197fc567e742d3e268313 227 SUPERFAMILY SSF55144 69 210 3.84E-31 T 13-10-2018 IPR009097 Cyclic phosphodiesterase ambt_16440 0848f81df08197fc567e742d3e268313 227 Pfam PF02834 LigT like Phosphoesterase 73 119 2.2E-5 T 13-10-2018 IPR014051 Phosphoesterase, HXTX ambt_16440 0848f81df08197fc567e742d3e268313 227 Gene3D G3DSA:3.90.1140.10 56 211 5.4E-33 T 13-10-2018 ambt_16440 0848f81df08197fc567e742d3e268313 227 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 72 210 1.2E-26 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 ambt_16440 0848f81df08197fc567e742d3e268313 227 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 1 210 18.129 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 ambt_10380 cc896992721b69d147077482560e2d70 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 6.2E-19 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ambt_10380 cc896992721b69d147077482560e2d70 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.4E-87 T 13-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ambt_10380 cc896992721b69d147077482560e2d70 269 Gene3D G3DSA:3.60.10.10 1 268 1.3E-78 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_10380 cc896992721b69d147077482560e2d70 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 13-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 ambt_10380 cc896992721b69d147077482560e2d70 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 1.2E-99 T 13-10-2018 ambt_10380 cc896992721b69d147077482560e2d70 269 SUPERFAMILY SSF56219 1 267 3.14E-86 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_00215 26ee04ab3b82fde9cff724c3b043366d 455 Pfam PF05787 Bacterial protein of unknown function (DUF839) 38 125 5.2E-12 T 13-10-2018 IPR008557 Protein of unknown function DUF839 ambt_00215 26ee04ab3b82fde9cff724c3b043366d 455 Pfam PF05787 Bacterial protein of unknown function (DUF839) 146 442 4.1E-55 T 13-10-2018 IPR008557 Protein of unknown function DUF839 ambt_00215 26ee04ab3b82fde9cff724c3b043366d 455 SUPERFAMILY SSF63829 217 438 9.81E-8 T 13-10-2018 ambt_05215 f02f45c1bc779b16300df3018a7e0404 263 Gene3D G3DSA:3.60.15.10 7 263 5.5E-89 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_05215 f02f45c1bc779b16300df3018a7e0404 263 PIRSF PIRSF005457 7 263 2.6E-98 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ambt_05215 f02f45c1bc779b16300df3018a7e0404 263 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 12 263 1.1E-103 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ambt_05215 f02f45c1bc779b16300df3018a7e0404 263 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 176 263 4.8E-27 T 13-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ambt_05215 f02f45c1bc779b16300df3018a7e0404 263 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 10 263 44.006 T 13-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ambt_05215 f02f45c1bc779b16300df3018a7e0404 263 SMART SM00849 20 175 2.3E-32 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_05215 f02f45c1bc779b16300df3018a7e0404 263 Pfam PF00753 Metallo-beta-lactamase superfamily 22 175 4.8E-15 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_05215 f02f45c1bc779b16300df3018a7e0404 263 SUPERFAMILY SSF56281 12 263 1.52E-68 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_20035 ed9de690b34e445328fd1801a50f867d 242 SUPERFAMILY SSF50475 7 233 1.57E-46 T 13-10-2018 ambt_20035 ed9de690b34e445328fd1801a50f867d 242 Gene3D G3DSA:3.20.180.10 154 242 1.5E-16 T 13-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily ambt_20035 ed9de690b34e445328fd1801a50f867d 242 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 3 147 1.1E-18 T 13-10-2018 ambt_20035 ed9de690b34e445328fd1801a50f867d 242 Pfam PF10615 Protein of unknown function (DUF2470) 160 228 3.4E-10 T 13-10-2018 IPR019595 Domain of unknown function DUF2470 ambt_20035 ed9de690b34e445328fd1801a50f867d 242 Gene3D G3DSA:2.30.110.10 1 146 1.1E-40 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ambt_14470 369d38a95b40855f5f9dc744852389a7 142 Pfam PF09537 Domain of unknown function (DUF2383) 4 109 8.2E-12 T 13-10-2018 IPR019052 Domain of unknown function DUF2383 ambt_14470 369d38a95b40855f5f9dc744852389a7 142 SUPERFAMILY SSF47240 6 140 6.35E-15 T 13-10-2018 IPR009078 Ferritin-like superfamily ambt_14470 369d38a95b40855f5f9dc744852389a7 142 Gene3D G3DSA:1.20.1260.10 1 139 1.4E-12 T 13-10-2018 IPR012347 Ferritin-like ambt_18255 c90e12a66924ada787464d2c7a17ffa0 443 SUPERFAMILY SSF56317 222 406 6.15E-17 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ambt_18255 c90e12a66924ada787464d2c7a17ffa0 443 Gene3D G3DSA:3.60.110.10 213 429 3.9E-18 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ambt_18255 c90e12a66924ada787464d2c7a17ffa0 443 Pfam PF00795 Carbon-nitrogen hydrolase 222 348 3.9E-7 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ambt_18215 cee3a62a055008e779ea1245f07c1000 295 Gene3D G3DSA:1.10.10.10 1 83 2.4E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_18215 cee3a62a055008e779ea1245f07c1000 295 SUPERFAMILY SSF46785 1 109 6.53E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_18215 cee3a62a055008e779ea1245f07c1000 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 5.2E-15 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_18215 cee3a62a055008e779ea1245f07c1000 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_18215 cee3a62a055008e779ea1245f07c1000 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_18215 cee3a62a055008e779ea1245f07c1000 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.3E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_18215 cee3a62a055008e779ea1245f07c1000 295 SUPERFAMILY SSF53850 87 286 1.45E-16 T 13-10-2018 ambt_18215 cee3a62a055008e779ea1245f07c1000 295 Pfam PF03466 LysR substrate binding domain 88 284 2.2E-9 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_18215 cee3a62a055008e779ea1245f07c1000 295 Gene3D G3DSA:3.40.190.290 85 293 1.8E-53 T 13-10-2018 ambt_18215 cee3a62a055008e779ea1245f07c1000 295 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 2 291 6.1E-83 T 13-10-2018 IPR017685 HTH-type transcriptional regulator ArgP ambt_14670 a955da14ecaf595b964baa136ee3c58a 244 PRINTS PR00603 Cytochrome C1 signature 42 61 7.9E-6 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 ambt_14670 a955da14ecaf595b964baa136ee3c58a 244 PRINTS PR00603 Cytochrome C1 signature 190 209 7.9E-6 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 ambt_14670 a955da14ecaf595b964baa136ee3c58a 244 PRINTS PR00603 Cytochrome C1 signature 22 41 7.9E-6 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 ambt_14670 a955da14ecaf595b964baa136ee3c58a 244 PRINTS PR00603 Cytochrome C1 signature 209 224 7.9E-6 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 ambt_14670 a955da14ecaf595b964baa136ee3c58a 244 SUPERFAMILY SSF46626 16 208 5.44E-51 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_14670 a955da14ecaf595b964baa136ee3c58a 244 Gene3D G3DSA:1.10.760.10 24 209 2.9E-23 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_14670 a955da14ecaf595b964baa136ee3c58a 244 Pfam PF02167 Cytochrome C1 family 30 243 8.3E-22 T 13-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 ambt_19735 6f3dd4c80aa05d56fa0a22c1ff4fb348 227 Gene3D G3DSA:3.30.1130.10 98 227 9.9E-45 T 13-10-2018 ambt_19735 6f3dd4c80aa05d56fa0a22c1ff4fb348 227 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 47 227 29.316 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ambt_19735 6f3dd4c80aa05d56fa0a22c1ff4fb348 227 Gene3D G3DSA:1.10.286.10 9 97 5.9E-33 T 13-10-2018 ambt_19735 6f3dd4c80aa05d56fa0a22c1ff4fb348 227 Pfam PF01227 GTP cyclohydrolase I 52 226 2.6E-56 T 13-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ambt_19735 6f3dd4c80aa05d56fa0a22c1ff4fb348 227 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 52 226 2.3E-71 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ambt_19735 6f3dd4c80aa05d56fa0a22c1ff4fb348 227 SUPERFAMILY SSF55620 29 226 3.04E-67 T 13-10-2018 ambt_19735 6f3dd4c80aa05d56fa0a22c1ff4fb348 227 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 157 167 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ambt_13575 027829b54aacb1664aaaf426be549147 616 Gene3D G3DSA:3.30.1330.60 481 616 1.0E-32 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_13575 027829b54aacb1664aaaf426be549147 616 Pfam PF00691 OmpA family 511 607 1.4E-20 T 13-10-2018 IPR006665 OmpA-like domain ambt_13575 027829b54aacb1664aaaf426be549147 616 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 4 411 4.2E-71 T 13-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 ambt_13575 027829b54aacb1664aaaf426be549147 616 Pfam PF02321 Outer membrane efflux protein 220 399 8.1E-24 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_13575 027829b54aacb1664aaaf426be549147 616 Pfam PF02321 Outer membrane efflux protein 6 190 1.5E-16 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_13575 027829b54aacb1664aaaf426be549147 616 SUPERFAMILY SSF103088 490 613 3.27E-30 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_13575 027829b54aacb1664aaaf426be549147 616 PRINTS PR01021 OMPA domain signature 541 556 3.5E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_13575 027829b54aacb1664aaaf426be549147 616 PRINTS PR01021 OMPA domain signature 511 533 3.5E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_13575 027829b54aacb1664aaaf426be549147 616 PRINTS PR01021 OMPA domain signature 556 572 3.5E-9 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_13575 027829b54aacb1664aaaf426be549147 616 Gene3D G3DSA:1.20.1600.10 4 408 1.2E-74 T 13-10-2018 ambt_13575 027829b54aacb1664aaaf426be549147 616 SUPERFAMILY SSF56954 5 413 7.59E-68 T 13-10-2018 ambt_03285 a11161835f218f3e1dddd9d57e62a861 495 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 26 486 6.6E-107 T 13-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 ambt_03285 a11161835f218f3e1dddd9d57e62a861 495 Gene3D G3DSA:1.20.1600.10 77 486 6.3E-122 T 13-10-2018 ambt_03285 a11161835f218f3e1dddd9d57e62a861 495 Pfam PF02321 Outer membrane efflux protein 86 269 1.2E-26 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_03285 a11161835f218f3e1dddd9d57e62a861 495 Pfam PF02321 Outer membrane efflux protein 308 484 2.2E-26 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_03285 a11161835f218f3e1dddd9d57e62a861 495 Gene3D G3DSA:2.20.200.10 123 375 6.3E-122 T 13-10-2018 ambt_03285 a11161835f218f3e1dddd9d57e62a861 495 SUPERFAMILY SSF56954 18 487 2.49E-98 T 13-10-2018 ambt_15070 bf04d5b7c82a9614cc8281e223506c90 289 Gene3D G3DSA:3.20.20.140 1 289 3.8E-52 T 13-10-2018 ambt_15070 bf04d5b7c82a9614cc8281e223506c90 289 SUPERFAMILY SSF51556 2 288 9.43E-33 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_15070 bf04d5b7c82a9614cc8281e223506c90 289 Pfam PF04909 Amidohydrolase 4 287 6.1E-21 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ambt_13445 f03e461d70f78f15076fa6631f8a388e 283 SUPERFAMILY SSF64518 1 282 1.7E-86 T 13-10-2018 ambt_13445 f03e461d70f78f15076fa6631f8a388e 283 PRINTS PR00207 Flagellin signature 111 134 1.1E-22 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13445 f03e461d70f78f15076fa6631f8a388e 283 PRINTS PR00207 Flagellin signature 76 95 1.1E-22 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13445 f03e461d70f78f15076fa6631f8a388e 283 PRINTS PR00207 Flagellin signature 37 54 1.1E-22 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ambt_13445 f03e461d70f78f15076fa6631f8a388e 283 Gene3D G3DSA:1.20.1330.10 45 175 3.4E-71 T 13-10-2018 ambt_13445 f03e461d70f78f15076fa6631f8a388e 283 Gene3D G3DSA:1.10.8.410 231 282 6.6E-23 T 13-10-2018 ambt_13445 f03e461d70f78f15076fa6631f8a388e 283 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.3E-36 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ambt_13445 f03e461d70f78f15076fa6631f8a388e 283 Pfam PF00700 Bacterial flagellin C-terminal helical region 198 282 6.5E-27 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ambt_13445 f03e461d70f78f15076fa6631f8a388e 283 Gene3D G3DSA:1.20.58.1830 5 33 3.4E-71 T 13-10-2018 ambt_14125 58a57d3ecab0896036269b35667970c7 435 SUPERFAMILY SSF52540 33 292 5.87E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14125 58a57d3ecab0896036269b35667970c7 435 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 6 408 8.9E-161 T 13-10-2018 IPR021228 Protein of unknown function DUF2791 ambt_21930 6dbc44741affe6ef1db388c03cb50d6f 85 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 7 85 26.382 T 13-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 ambt_21930 6dbc44741affe6ef1db388c03cb50d6f 85 SUPERFAMILY SSF64307 8 84 1.31E-22 T 13-10-2018 IPR036868 TusA-like domain superfamily ambt_21930 6dbc44741affe6ef1db388c03cb50d6f 85 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 16 40 - T 13-10-2018 IPR001455 TusA-like domain ambt_21930 6dbc44741affe6ef1db388c03cb50d6f 85 Pfam PF01206 Sulfurtransferase TusA 15 83 4.6E-22 T 13-10-2018 IPR001455 TusA-like domain ambt_21930 6dbc44741affe6ef1db388c03cb50d6f 85 Gene3D G3DSA:3.30.110.40 5 84 4.1E-27 T 13-10-2018 IPR036868 TusA-like domain superfamily ambt_04580 55a8a660efc4260014a91f7bbbf46061 199 Pfam PF13662 Toprim domain 83 172 1.1E-23 T 13-10-2018 IPR006171 TOPRIM domain ambt_04580 55a8a660efc4260014a91f7bbbf46061 199 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 6.7E-77 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ambt_04580 55a8a660efc4260014a91f7bbbf46061 199 SMART SM00493 81 166 6.6E-17 T 13-10-2018 IPR006171 TOPRIM domain ambt_04580 55a8a660efc4260014a91f7bbbf46061 199 Pfam PF02132 RecR protein 40 77 1.8E-14 T 13-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger ambt_04580 55a8a660efc4260014a91f7bbbf46061 199 Gene3D G3DSA:1.10.8.420 1 52 5.1E-17 T 13-10-2018 ambt_04580 55a8a660efc4260014a91f7bbbf46061 199 SUPERFAMILY SSF111304 2 199 1.57E-73 T 13-10-2018 IPR023627 Recombination protein RecR ambt_04580 55a8a660efc4260014a91f7bbbf46061 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 100.469 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ambt_04580 55a8a660efc4260014a91f7bbbf46061 199 Gene3D G3DSA:3.40.1360.10 77 199 1.1E-41 T 13-10-2018 ambt_00050 4fc2f007726893b1236f841a634f1b45 170 Pfam PF04220 Der GTPase activator (YihI) 22 155 2.4E-38 T 13-10-2018 IPR007336 Der GTPase activator GO:0005096 ambt_00050 4fc2f007726893b1236f841a634f1b45 170 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 163 14.671 T 13-10-2018 IPR007336 Der GTPase activator GO:0005096 ambt_00340 17082ee2329fe6fecb499c029662e288 138 SUPERFAMILY SSF161084 5 131 1.15E-17 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily ambt_00340 17082ee2329fe6fecb499c029662e288 138 Gene3D G3DSA:1.20.120.550 1 138 8.6E-18 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily ambt_00340 17082ee2329fe6fecb499c029662e288 138 Pfam PF01124 MAPEG family 9 134 1.3E-14 T 13-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein ambt_02650 bd17c137db4aa9c18f1c5698fad761c8 238 Gene3D G3DSA:3.40.50.300 4 235 1.1E-64 T 13-10-2018 ambt_02650 bd17c137db4aa9c18f1c5698fad761c8 238 SMART SM00382 35 222 1.1E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_02650 bd17c137db4aa9c18f1c5698fad761c8 238 SUPERFAMILY SSF52540 7 227 7.83E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_02650 bd17c137db4aa9c18f1c5698fad761c8 238 Pfam PF00005 ABC transporter 26 174 4.3E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_02650 bd17c137db4aa9c18f1c5698fad761c8 238 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_09345 c3d497ca02b316c2d21bb99063b5cf5b 325 PIRSF PIRSF034367 1 325 5.7E-187 T 13-10-2018 IPR015004 Protein of unknown function DUF1852 ambt_09345 c3d497ca02b316c2d21bb99063b5cf5b 325 Pfam PF08908 Domain of unknown function (DUF1852) 1 321 5.5E-179 T 13-10-2018 IPR015004 Protein of unknown function DUF1852 ambt_02765 48de110a287cb340008b3fa976702a20 147 SUPERFAMILY SSF50370 43 117 1.3E-10 T 13-10-2018 IPR035992 Ricin B-like lectins ambt_02765 48de110a287cb340008b3fa976702a20 147 Pfam PF00652 Ricin-type beta-trefoil lectin domain 46 116 5.8E-9 T 13-10-2018 IPR000772 Ricin B, lectin domain ambt_02765 48de110a287cb340008b3fa976702a20 147 Gene3D G3DSA:2.80.10.50 21 126 7.1E-10 T 13-10-2018 ambt_18910 2b46ae7d74abb3196d3e06b2ca20b305 1889 SUPERFAMILY SSF69318 1643 1875 2.09E-10 T 13-10-2018 ambt_18910 2b46ae7d74abb3196d3e06b2ca20b305 1889 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 143 188 3.1E-5 T 13-10-2018 IPR001434 Domain of unknown function DUF11 ambt_18910 2b46ae7d74abb3196d3e06b2ca20b305 1889 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 639 684 5.3E-4 T 13-10-2018 IPR001434 Domain of unknown function DUF11 ambt_18910 2b46ae7d74abb3196d3e06b2ca20b305 1889 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 883 923 2.2E-4 T 13-10-2018 IPR001434 Domain of unknown function DUF11 ambt_18910 2b46ae7d74abb3196d3e06b2ca20b305 1889 SUPERFAMILY SSF103647 1363 1465 5.36E-6 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 ambt_19910 9f39938178af59bf22ec48509d7b3135 148 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 143 7.1E-50 T 13-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 ambt_19910 9f39938178af59bf22ec48509d7b3135 148 Gene3D G3DSA:1.20.120.1370 1 148 1.0E-46 T 13-10-2018 IPR038309 Rsd/AlgQ superfamily ambt_19910 9f39938178af59bf22ec48509d7b3135 148 PIRSF PIRSF016548 1 147 1.9E-45 T 13-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 ambt_14185 76449ecdc8dcc6416d707741dedc77ba 291 SUPERFAMILY SSF53850 52 272 1.85E-6 T 13-10-2018 ambt_07085 56173e77436cf27273956f05568087f7 108 Pfam PF12966 N-ATPase, AtpR subunit 11 92 6.3E-22 T 13-10-2018 IPR017581 N-ATPase, AtpR subunit-like ambt_07085 56173e77436cf27273956f05568087f7 108 TIGRFAM TIGR03165 F1F0_chp_2: F1/F0 ATPase, Methanosarcina type, subunit 2 11 91 7.0E-23 T 13-10-2018 IPR017581 N-ATPase, AtpR subunit-like ambt_13265 f28c6a0e03f6d418c053019a7a1228b0 767 Pfam PF02120 Flagellar hook-length control protein FliK 640 722 1.1E-22 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal ambt_13265 f28c6a0e03f6d418c053019a7a1228b0 767 PRINTS PR01007 Flagellar hook-length control protein signature 655 673 1.5E-7 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 ambt_13265 f28c6a0e03f6d418c053019a7a1228b0 767 PRINTS PR01007 Flagellar hook-length control protein signature 423 436 1.5E-7 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 ambt_13265 f28c6a0e03f6d418c053019a7a1228b0 767 PRINTS PR01007 Flagellar hook-length control protein signature 688 711 1.5E-7 T 13-10-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 ambt_13265 f28c6a0e03f6d418c053019a7a1228b0 767 Gene3D G3DSA:3.30.750.140 620 732 2.8E-31 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily ambt_12555 23209d560613369cb481dc063d512d37 555 SUPERFAMILY SSF53187 221 459 1.69E-53 T 13-10-2018 ambt_12555 23209d560613369cb481dc063d512d37 555 Pfam PF02225 PA domain 145 235 2.6E-5 T 13-10-2018 IPR003137 PA domain ambt_12555 23209d560613369cb481dc063d512d37 555 Gene3D G3DSA:3.50.30.30 102 252 7.3E-138 T 13-10-2018 ambt_12555 23209d560613369cb481dc063d512d37 555 Pfam PF04389 Peptidase family M28 263 448 6.5E-27 T 13-10-2018 IPR007484 Peptidase M28 ambt_12555 23209d560613369cb481dc063d512d37 555 Gene3D G3DSA:3.40.630.10 50 452 7.3E-138 T 13-10-2018 ambt_04655 d4214a3ad210134a8b56275847b50468 214 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 11 214 32.845 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ambt_04655 d4214a3ad210134a8b56275847b50468 214 PIRSF PIRSF000495 10 214 2.4E-63 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ambt_04655 d4214a3ad210134a8b56275847b50468 214 Pfam PF00117 Glutamine amidotransferase class-I 21 211 1.9E-20 T 13-10-2018 IPR017926 Glutamine amidotransferase ambt_04655 d4214a3ad210134a8b56275847b50468 214 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 12 213 5.6E-64 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ambt_04655 d4214a3ad210134a8b56275847b50468 214 Gene3D G3DSA:3.40.50.880 6 214 5.8E-67 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_04655 d4214a3ad210134a8b56275847b50468 214 SUPERFAMILY SSF52317 10 213 2.45E-53 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_13400 7c08865e60fb7de0ec83405dcf9b622e 351 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 93 280 2.3E-16 T 13-10-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 ambt_02680 233aee9d81e075bfc25c6486e25743d7 113 Pfam PF02810 SEC-C motif 96 113 2.4E-10 T 13-10-2018 IPR004027 SEC-C motif ambt_02680 233aee9d81e075bfc25c6486e25743d7 113 TIGRFAM TIGR04102 SWIM_PBPRA1643: SWIM/SEC-C metal-binding motif protein, PBPRA1643 family 4 113 9.4E-43 T 13-10-2018 IPR026368 SWIM/SEC-C metal-binding motif protein, PBPRA1643 family ambt_02680 233aee9d81e075bfc25c6486e25743d7 113 Gene3D G3DSA:3.10.450.50 37 113 5.4E-9 T 13-10-2018 ambt_02680 233aee9d81e075bfc25c6486e25743d7 113 SUPERFAMILY SSF103642 95 113 1.13E-7 T 13-10-2018 ambt_04235 6d1cc95c6cecfc56b5b6086301f8f285 85 Pfam PF03937 Flavinator of succinate dehydrogenase 7 76 5.0E-26 T 13-10-2018 IPR005631 Flavinator of succinate dehydrogenase ambt_04235 6d1cc95c6cecfc56b5b6086301f8f285 85 Gene3D G3DSA:1.10.150.250 1 85 4.0E-33 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily ambt_04235 6d1cc95c6cecfc56b5b6086301f8f285 85 SUPERFAMILY SSF109910 2 79 4.84E-27 T 13-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily ambt_14950 dc772efd30c01d0147cee03557959b55 387 Pfam PF03594 Benzoate membrane transport protein 4 377 3.4E-120 T 13-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ambt_14950 dc772efd30c01d0147cee03557959b55 387 TIGRFAM TIGR00843 benE: benzoate transporter 11 377 2.3E-91 T 13-10-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ambt_16690 fe5cf2d78027cf65e68423b850a1ca4a 340 Gene3D G3DSA:3.40.50.2300 170 334 1.5E-60 T 13-10-2018 ambt_16690 fe5cf2d78027cf65e68423b850a1ca4a 340 Gene3D G3DSA:3.40.50.2300 81 329 1.5E-60 T 13-10-2018 ambt_16690 fe5cf2d78027cf65e68423b850a1ca4a 340 Gene3D G3DSA:1.10.260.40 2 64 3.6E-17 T 13-10-2018 ambt_16690 fe5cf2d78027cf65e68423b850a1ca4a 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 3.4E-13 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_16690 fe5cf2d78027cf65e68423b850a1ca4a 340 SUPERFAMILY SSF53822 80 338 1.16E-52 T 13-10-2018 IPR028082 Periplasmic binding protein-like I ambt_16690 fe5cf2d78027cf65e68423b850a1ca4a 340 Pfam PF13377 Periplasmic binding protein-like domain 179 337 2.1E-31 T 13-10-2018 ambt_16690 fe5cf2d78027cf65e68423b850a1ca4a 340 SUPERFAMILY SSF47413 6 64 1.38E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_16690 fe5cf2d78027cf65e68423b850a1ca4a 340 SMART SM00354 6 76 7.8E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ambt_06315 62b6f71157989ffa0249e4d7051f1959 177 Gene3D G3DSA:1.20.1420.60 15 176 1.1E-11 T 13-10-2018 ambt_06315 62b6f71157989ffa0249e4d7051f1959 177 Pfam PF14300 Domain of unknown function (DUF4375) 54 172 1.6E-34 T 13-10-2018 IPR025402 Domain of unknown function DUF4375 ambt_21805 8007c3067956d9fba4307407ec438e7e 415 SUPERFAMILY SSF103473 22 403 5.36E-44 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_21805 8007c3067956d9fba4307407ec438e7e 415 Gene3D G3DSA:1.20.1720.10 25 405 9.1E-78 T 13-10-2018 ambt_21805 8007c3067956d9fba4307407ec438e7e 415 Pfam PF07690 Major Facilitator Superfamily 32 370 3.7E-28 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_18135 b503bcaf5c5dc9b13128c92ad548a9cc 102 Pfam PF12305 Protein of unknown function (DUF3630) 34 98 1.2E-5 T 13-10-2018 IPR022080 Protein of unknown function DUF3630 ambt_13830 56f67381fae305cc4b8e8200106e1a50 297 Gene3D G3DSA:3.90.550.10 1 296 3.2E-89 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_13830 56f67381fae305cc4b8e8200106e1a50 297 Pfam PF00483 Nucleotidyl transferase 6 277 2.1E-29 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ambt_13830 56f67381fae305cc4b8e8200106e1a50 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 273 3.0E-112 T 13-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 ambt_13830 56f67381fae305cc4b8e8200106e1a50 297 SUPERFAMILY SSF53448 5 285 4.28E-63 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_02195 778d0f5ad2227064f38ef20ba18ee0c3 470 Pfam PF08245 Mur ligase middle domain 109 285 5.8E-30 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ambt_02195 778d0f5ad2227064f38ef20ba18ee0c3 470 SUPERFAMILY SSF53623 95 293 1.96E-44 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_02195 778d0f5ad2227064f38ef20ba18ee0c3 470 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 447 6.4E-116 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ambt_02195 778d0f5ad2227064f38ef20ba18ee0c3 470 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 386 1.3E-7 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ambt_02195 778d0f5ad2227064f38ef20ba18ee0c3 470 Gene3D G3DSA:3.90.190.20 311 445 2.0E-39 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_02195 778d0f5ad2227064f38ef20ba18ee0c3 470 Gene3D G3DSA:3.40.50.720 4 92 1.1E-15 T 13-10-2018 ambt_02195 778d0f5ad2227064f38ef20ba18ee0c3 470 SUPERFAMILY SSF53244 312 447 2.17E-38 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ambt_02195 778d0f5ad2227064f38ef20ba18ee0c3 470 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 449 32.044 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ambt_02195 778d0f5ad2227064f38ef20ba18ee0c3 470 SUPERFAMILY SSF51984 7 93 4.71E-14 T 13-10-2018 ambt_02195 778d0f5ad2227064f38ef20ba18ee0c3 470 Gene3D G3DSA:3.40.1190.10 93 309 2.4E-57 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ambt_16710 e131957d1c9287aa22b4bfa4df2923cd 226 Gene3D G3DSA:1.10.150.240 18 92 4.0E-63 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ambt_16710 e131957d1c9287aa22b4bfa4df2923cd 226 SUPERFAMILY SSF56784 1 218 6.96E-41 T 13-10-2018 IPR036412 HAD-like superfamily ambt_16710 e131957d1c9287aa22b4bfa4df2923cd 226 Gene3D G3DSA:3.40.50.1000 7 217 4.0E-63 T 13-10-2018 IPR023214 HAD superfamily ambt_16710 e131957d1c9287aa22b4bfa4df2923cd 226 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 7 186 1.5E-12 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_16710 e131957d1c9287aa22b4bfa4df2923cd 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 41 193 7.0E-15 T 13-10-2018 ambt_16710 e131957d1c9287aa22b4bfa4df2923cd 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 3.6E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_16710 e131957d1c9287aa22b4bfa4df2923cd 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 107 120 3.6E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_16710 e131957d1c9287aa22b4bfa4df2923cd 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 156 176 3.6E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_16710 e131957d1c9287aa22b4bfa4df2923cd 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 183 196 3.6E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_16710 e131957d1c9287aa22b4bfa4df2923cd 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 138 154 3.6E-14 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ambt_16710 e131957d1c9287aa22b4bfa4df2923cd 226 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 5 199 8.1E-48 T 13-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 ambt_13000 4f314b94e9d332304071ce19fae5b98f 336 SUPERFAMILY SSF56529 76 334 3.27E-58 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_13000 4f314b94e9d332304071ce19fae5b98f 336 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 81 332 2.6E-41 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ambt_13000 4f314b94e9d332304071ce19fae5b98f 336 Gene3D G3DSA:3.90.850.10 1 335 6.2E-142 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_00695 73d80b91d1645dfee0e6ae2be60806d5 590 SUPERFAMILY SSF103088 466 561 4.19E-11 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_00695 73d80b91d1645dfee0e6ae2be60806d5 590 Gene3D G3DSA:3.30.1330.60 460 566 6.0E-8 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_00695 73d80b91d1645dfee0e6ae2be60806d5 590 Pfam PF00691 OmpA family 501 561 1.5E-7 T 13-10-2018 IPR006665 OmpA-like domain ambt_10075 fdfb8f1afaa5751323ff6983656c2d12 336 SUPERFAMILY SSF50475 233 296 2.07E-6 T 13-10-2018 ambt_10075 fdfb8f1afaa5751323ff6983656c2d12 336 Gene3D G3DSA:2.30.110.10 183 314 9.8E-11 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ambt_10075 fdfb8f1afaa5751323ff6983656c2d12 336 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 219 288 1.6E-8 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ambt_21755 13dff9508fabe405f1a03a211d7d97c4 704 Pfam PF00593 TonB dependent receptor 229 703 8.7E-52 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_21755 13dff9508fabe405f1a03a211d7d97c4 704 Gene3D G3DSA:2.170.130.10 43 165 6.3E-32 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_21755 13dff9508fabe405f1a03a211d7d97c4 704 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 704 4.7E-101 T 13-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 ambt_21755 13dff9508fabe405f1a03a211d7d97c4 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 154 1.5E-18 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_21755 13dff9508fabe405f1a03a211d7d97c4 704 SUPERFAMILY SSF56935 29 704 4.81E-123 T 13-10-2018 ambt_21755 13dff9508fabe405f1a03a211d7d97c4 704 Gene3D G3DSA:2.40.170.20 166 704 1.9E-108 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_18275 78c5eaa9d0e798ab374089ff0eebf4cd 344 Gene3D G3DSA:3.40.190.10 142 325 7.1E-69 T 13-10-2018 ambt_18275 78c5eaa9d0e798ab374089ff0eebf4cd 344 Gene3D G3DSA:3.40.190.10 45 313 7.1E-69 T 13-10-2018 ambt_18275 78c5eaa9d0e798ab374089ff0eebf4cd 344 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 27 0.0012 T 13-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ambt_18275 78c5eaa9d0e798ab374089ff0eebf4cd 344 Pfam PF13343 Bacterial extracellular solute-binding protein 98 311 3.8E-10 T 13-10-2018 ambt_18275 78c5eaa9d0e798ab374089ff0eebf4cd 344 PIRSF PIRSF002825 1 344 1.4E-82 T 13-10-2018 IPR026045 Ferric binding protein ambt_18275 78c5eaa9d0e798ab374089ff0eebf4cd 344 SUPERFAMILY SSF53850 42 332 7.91E-45 T 13-10-2018 ambt_22020 1ef66af3a83704957dc99d29b99552ed 80 Gene3D G3DSA:1.10.238.160 22 73 3.8E-6 T 13-10-2018 ambt_22020 1ef66af3a83704957dc99d29b99552ed 80 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 19 68 1.4E-25 T 13-10-2018 IPR010260 DNA-binding transcriptional activator AlpA ambt_12880 7b34d4a8ba72355fd9784f206e2f1ef4 263 Pfam PF01636 Phosphotransferase enzyme family 22 219 2.5E-20 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase ambt_12880 7b34d4a8ba72355fd9784f206e2f1ef4 263 Gene3D G3DSA:3.90.1200.10 98 263 1.4E-17 T 13-10-2018 ambt_12880 7b34d4a8ba72355fd9784f206e2f1ef4 263 SUPERFAMILY SSF56112 22 233 5.1E-24 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_12060 03378af1d3486c21d8d376d0e3225eba 567 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 50 528 1.5E-73 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 ambt_18205 4b0132a7dc4c5cf0ce3df085ea148c31 105 Pfam PF00893 Small Multidrug Resistance protein 1 94 1.4E-23 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 ambt_18205 4b0132a7dc4c5cf0ce3df085ea148c31 105 SUPERFAMILY SSF103481 5 103 2.35E-17 T 13-10-2018 ambt_18205 4b0132a7dc4c5cf0ce3df085ea148c31 105 Gene3D G3DSA:1.10.3730.20 1 105 4.2E-27 T 13-10-2018 ambt_21440 27f94a24ef8fb3be52d09c7156994fee 462 Gene3D G3DSA:3.40.605.10 3 454 7.3E-150 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_21440 27f94a24ef8fb3be52d09c7156994fee 462 Gene3D G3DSA:3.40.309.10 236 426 7.3E-150 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ambt_21440 27f94a24ef8fb3be52d09c7156994fee 462 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 257 268 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ambt_21440 27f94a24ef8fb3be52d09c7156994fee 462 SUPERFAMILY SSF53720 3 456 9.69E-143 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_21440 27f94a24ef8fb3be52d09c7156994fee 462 Pfam PF00171 Aldehyde dehydrogenase family 3 454 1.4E-140 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_12825 e47ceec0f7d61bf89836f20b89438af7 279 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 15 111 1.4E-31 T 13-10-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain ambt_12825 e47ceec0f7d61bf89836f20b89438af7 279 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 115 270 1.3E-53 T 13-10-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system ambt_10815 8a4ae5c3345cd47b9ea8b5a61451d56f 443 Pfam PF00860 Permease family 22 402 4.8E-47 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ambt_10815 8a4ae5c3345cd47b9ea8b5a61451d56f 443 PIRSF PIRSF005353 1 443 4.7E-172 T 13-10-2018 IPR026033 Purine permease PbuG-like ambt_14655 321c708d797ad386d2839ee527140340 178 SUPERFAMILY SSF54427 49 157 7.02E-7 T 13-10-2018 IPR032710 NTF2-like domain superfamily ambt_12940 d08d0c46de1cfa93bab5a6115da849ee 185 Gene3D G3DSA:2.60.120.620 8 183 4.3E-13 T 13-10-2018 ambt_12940 d08d0c46de1cfa93bab5a6115da849ee 185 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 96 178 9.4E-8 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ambt_18330 fe2f618ef137e470f8bbbb32c578fc34 352 Gene3D G3DSA:3.30.70.270 189 352 1.5E-47 T 13-10-2018 ambt_18330 fe2f618ef137e470f8bbbb32c578fc34 352 SMART SM00267 181 352 3.5E-51 T 13-10-2018 IPR000160 GGDEF domain ambt_18330 fe2f618ef137e470f8bbbb32c578fc34 352 Pfam PF00990 Diguanylate cyclase, GGDEF domain 194 349 1.7E-40 T 13-10-2018 IPR000160 GGDEF domain ambt_18330 fe2f618ef137e470f8bbbb32c578fc34 352 SUPERFAMILY SSF55073 199 352 2.2E-41 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_18330 fe2f618ef137e470f8bbbb32c578fc34 352 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 192 351 1.4E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_21250 a82a6e955f83639db8c6283f81cd567b 231 SUPERFAMILY SSF52172 2 124 2.56E-36 T 13-10-2018 IPR011006 CheY-like superfamily ambt_21250 a82a6e955f83639db8c6283f81cd567b 231 Pfam PF00072 Response regulator receiver domain 5 114 4.5E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_21250 a82a6e955f83639db8c6283f81cd567b 231 SMART SM00448 3 114 5.4E-37 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_21250 a82a6e955f83639db8c6283f81cd567b 231 SUPERFAMILY SSF46894 125 221 9.92E-19 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_21250 a82a6e955f83639db8c6283f81cd567b 231 Gene3D G3DSA:1.10.10.10 121 226 4.7E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_21250 a82a6e955f83639db8c6283f81cd567b 231 SMART SM00862 147 220 7.9E-12 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_21250 a82a6e955f83639db8c6283f81cd567b 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 219 8.6E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_21250 a82a6e955f83639db8c6283f81cd567b 231 Gene3D G3DSA:3.40.50.2300 1 120 3.7E-35 T 13-10-2018 ambt_04865 e43dc9e7373873281c01364c7cf2ce38 237 Pfam PF07273 Protein of unknown function (DUF1439) 29 128 8.9E-5 T 13-10-2018 IPR010835 Protein of unknown function DUF1439 ambt_20890 081b27cbb522daf11129e31b538d439a 117 Gene3D G3DSA:1.10.287.70 5 113 3.2E-19 T 13-10-2018 ambt_20890 081b27cbb522daf11129e31b538d439a 117 SUPERFAMILY SSF81324 10 97 5.23E-20 T 13-10-2018 ambt_20890 081b27cbb522daf11129e31b538d439a 117 Pfam PF07885 Ion channel 26 95 8.4E-17 T 13-10-2018 IPR013099 Potassium channel domain ambt_03460 d196d516d6bff1443821135fbcdee017 164 SUPERFAMILY SSF55781 37 159 8.59E-12 T 13-10-2018 ambt_03460 d196d516d6bff1443821135fbcdee017 164 Gene3D G3DSA:3.30.450.40 16 163 5.8E-10 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_12145 75310997c000a5d1ee526d02656d8c97 162 SUPERFAMILY SSF55781 27 157 4.58E-23 T 13-10-2018 ambt_12145 75310997c000a5d1ee526d02656d8c97 162 Gene3D G3DSA:3.30.450.40 4 161 4.8E-18 T 13-10-2018 IPR029016 GAF-like domain superfamily ambt_12145 75310997c000a5d1ee526d02656d8c97 162 Pfam PF01590 GAF domain 27 154 3.3E-10 T 13-10-2018 IPR003018 GAF domain GO:0005515 ambt_00815 41f718774c9ed47e538955c504196960 154 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 74 142 3.7E-13 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 ambt_00815 41f718774c9ed47e538955c504196960 154 SMART SM00360 73 145 1.8E-15 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 ambt_00815 41f718774c9ed47e538955c504196960 154 Gene3D G3DSA:3.30.70.330 53 153 1.0E-22 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ambt_00815 41f718774c9ed47e538955c504196960 154 SUPERFAMILY SSF54928 60 151 3.49E-21 T 13-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 ambt_13050 4ff66c16b7eb4ebd513d0e17bec1e46e 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 324 1.2E-19 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ambt_13050 4ff66c16b7eb4ebd513d0e17bec1e46e 331 Gene3D G3DSA:3.40.50.300 2 330 2.6E-65 T 13-10-2018 ambt_13050 4ff66c16b7eb4ebd513d0e17bec1e46e 331 SMART SM00382 32 239 3.5E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_13050 4ff66c16b7eb4ebd513d0e17bec1e46e 331 Pfam PF00005 ABC transporter 23 187 6.3E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_13050 4ff66c16b7eb4ebd513d0e17bec1e46e 331 SUPERFAMILY SSF52540 3 259 2.78E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_13050 4ff66c16b7eb4ebd513d0e17bec1e46e 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 306 4.0E-15 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ambt_19800 e9e3dd05c91da7a347d62ae89a3cd208 327 Pfam PF03280 Proteobacterial lipase chaperone protein 114 316 2.1E-51 T 13-10-2018 IPR004961 Lipase chaperone GO:0006457|GO:0016020|GO:0051082 ambt_19800 e9e3dd05c91da7a347d62ae89a3cd208 327 SUPERFAMILY SSF158855 66 322 8.63E-41 T 13-10-2018 ambt_21685 e6f06ed1d742a5b4951788b2a86f8edf 422 TIGRFAM TIGR00797 matE: MATE efflux family protein 1 392 2.9E-67 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_21685 e6f06ed1d742a5b4951788b2a86f8edf 422 Pfam PF01554 MatE 1 160 1.2E-13 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_21685 e6f06ed1d742a5b4951788b2a86f8edf 422 Pfam PF01554 MatE 226 372 1.4E-12 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_06920 fe14107e4e526f2e4485e3a0735a160c 334 Pfam PF00561 alpha/beta hydrolase fold 78 185 6.5E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_06920 fe14107e4e526f2e4485e3a0735a160c 334 Gene3D G3DSA:3.40.50.1820 56 333 2.0E-26 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_06920 fe14107e4e526f2e4485e3a0735a160c 334 SUPERFAMILY SSF53474 72 332 6.25E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_20315 c0d13879647be8c154ed090fef7cea2d 63 Gene3D G3DSA:1.10.1470.10 1 63 6.3E-31 T 13-10-2018 IPR036629 YjbJ superfamily ambt_20315 c0d13879647be8c154ed090fef7cea2d 63 PIRSF PIRSF039008 1 63 3.6E-31 T 13-10-2018 IPR026042 Stress response protein YjbJ ambt_20315 c0d13879647be8c154ed090fef7cea2d 63 Pfam PF05532 CsbD-like 4 56 1.7E-21 T 13-10-2018 IPR008462 CsbD-like domain ambt_20315 c0d13879647be8c154ed090fef7cea2d 63 SUPERFAMILY SSF69047 1 61 6.02E-25 T 13-10-2018 IPR036629 YjbJ superfamily ambt_18835 34c6bed8f72a86e32ff3fb15544d6691 468 Gene3D G3DSA:1.20.1600.10 23 462 1.5E-33 T 13-10-2018 ambt_18835 34c6bed8f72a86e32ff3fb15544d6691 468 Pfam PF02321 Outer membrane efflux protein 286 459 2.7E-12 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_18835 34c6bed8f72a86e32ff3fb15544d6691 468 SUPERFAMILY SSF56954 2 460 1.96E-33 T 13-10-2018 ambt_10745 253668062cd83c7b99fbacba6cde9608 272 Pfam PF01925 Sulfite exporter TauE/SafE 15 266 3.4E-49 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ambt_13805 b1385fa357e4c11b3d715efb3fe0a046 441 Gene3D G3DSA:3.40.50.450 108 439 1.4E-117 T 13-10-2018 ambt_13805 b1385fa357e4c11b3d715efb3fe0a046 441 Pfam PF14793 Domain of unknown function (DUF4478) 1 100 7.9E-40 T 13-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 ambt_13805 b1385fa357e4c11b3d715efb3fe0a046 441 Pfam PF11892 Domain of unknown function (DUF3412) 322 439 8.3E-55 T 13-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 ambt_13805 b1385fa357e4c11b3d715efb3fe0a046 441 Gene3D G3DSA:3.30.1850.10 1 104 4.5E-39 T 13-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 ambt_13805 b1385fa357e4c11b3d715efb3fe0a046 441 SUPERFAMILY SSF102405 111 317 2.59E-41 T 13-10-2018 ambt_13805 b1385fa357e4c11b3d715efb3fe0a046 441 Pfam PF03641 Possible lysine decarboxylase 177 316 1.4E-34 T 13-10-2018 IPR031100 LOG family ambt_11920 641eb20e6363648760dc36911191ecf7 357 Gene3D G3DSA:2.40.50.100 63 195 9.2E-62 T 13-10-2018 ambt_11920 641eb20e6363648760dc36911191ecf7 357 Gene3D G3DSA:2.40.420.20 42 350 9.2E-62 T 13-10-2018 ambt_11920 641eb20e6363648760dc36911191ecf7 357 Gene3D G3DSA:2.40.30.170 48 274 9.2E-62 T 13-10-2018 ambt_11920 641eb20e6363648760dc36911191ecf7 357 Pfam PF13437 HlyD family secretion protein 161 264 2.3E-6 T 13-10-2018 ambt_11920 641eb20e6363648760dc36911191ecf7 357 Gene3D G3DSA:1.10.287.470 97 156 9.2E-62 T 13-10-2018 ambt_11920 641eb20e6363648760dc36911191ecf7 357 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 351 5.2E-57 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_11920 641eb20e6363648760dc36911191ecf7 357 SUPERFAMILY SSF111369 54 231 1.01E-29 T 13-10-2018 ambt_14495 8715963764e041d82f9b4ec26c251531 300 Pfam PF10067 Predicted membrane protein (DUF2306) 97 250 2.7E-16 T 13-10-2018 IPR018750 Protein of unknown function DUF2306, membrane ambt_11630 b71566a958fdcb9c70f8c1fe1bd41240 270 Hamap MF_01805 Segregation and condensation protein A [scpA]. 36 267 20.268 T 13-10-2018 IPR003768 Segregation and condensation protein A ambt_11630 b71566a958fdcb9c70f8c1fe1bd41240 270 Pfam PF02616 Segregation and condensation protein ScpA 53 264 1.1E-26 T 13-10-2018 IPR003768 Segregation and condensation protein A ambt_04430 3d2019a0e0137015e03abad16c2e6697 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 157 1.1E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04430 3d2019a0e0137015e03abad16c2e6697 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 67 78 1.1E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04430 3d2019a0e0137015e03abad16c2e6697 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 176 1.1E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04430 3d2019a0e0137015e03abad16c2e6697 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.1E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04430 3d2019a0e0137015e03abad16c2e6697 239 SUPERFAMILY SSF51735 2 230 1.25E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_04430 3d2019a0e0137015e03abad16c2e6697 239 Pfam PF00106 short chain dehydrogenase 2 179 2.8E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_04430 3d2019a0e0137015e03abad16c2e6697 239 Gene3D G3DSA:3.40.50.720 1 237 8.6E-56 T 13-10-2018 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 Gene3D G3DSA:3.90.640.10 190 263 3.5E-129 T 13-10-2018 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 Pfam PF06723 MreB/Mbl protein 11 337 2.9E-148 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 3.6E-166 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 SUPERFAMILY SSF53067 153 339 2.6E-49 T 13-10-2018 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 Gene3D G3DSA:3.30.420.40 158 321 3.5E-129 T 13-10-2018 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 Gene3D G3DSA:3.30.420.40 14 331 3.5E-129 T 13-10-2018 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 SUPERFAMILY SSF53067 9 152 3.81E-38 T 13-10-2018 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.7E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 2.7E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 2.7E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.7E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ambt_17155 799143878cc1ac7aafcf9a8f98e12f39 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 2.7E-65 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ambt_00360 2170fd5e815c2997f9880c5253a7c77c 403 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 77 9.7E-19 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 ambt_00360 2170fd5e815c2997f9880c5253a7c77c 403 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 5.3E-72 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 ambt_00360 2170fd5e815c2997f9880c5253a7c77c 403 Pfam PF07670 Nucleoside recognition 89 185 6.3E-8 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ambt_00360 2170fd5e815c2997f9880c5253a7c77c 403 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 399 4.8E-144 T 13-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 ambt_19080 b574cf23334357de8a8f53233e604dbf 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 13-10-2018 IPR018038 Ribosomal protein L30, conserved site ambt_19080 b574cf23334357de8a8f53233e604dbf 59 Gene3D G3DSA:3.30.1390.20 1 58 1.4E-25 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily ambt_19080 b574cf23334357de8a8f53233e604dbf 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.2E-25 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19080 b574cf23334357de8a8f53233e604dbf 59 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 1.8E-20 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ambt_19080 b574cf23334357de8a8f53233e604dbf 59 SUPERFAMILY SSF55129 1 58 4.71E-21 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily ambt_19080 b574cf23334357de8a8f53233e604dbf 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 20.433 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19080 b574cf23334357de8a8f53233e604dbf 59 PIRSF PIRSF002211 1 59 5.0E-26 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_08655 fc92dab0ee69ab3d1329824589f61432 123 SUPERFAMILY SSF46955 1 105 1.76E-20 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily ambt_08655 fc92dab0ee69ab3d1329824589f61432 123 Gene3D G3DSA:1.10.1660.10 1 119 4.5E-21 T 13-10-2018 ambt_08655 fc92dab0ee69ab3d1329824589f61432 123 Pfam PF13411 MerR HTH family regulatory protein 2 61 2.7E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_08655 fc92dab0ee69ab3d1329824589f61432 123 SMART SM00422 1 69 2.3E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_08655 fc92dab0ee69ab3d1329824589f61432 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.8E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_08655 fc92dab0ee69ab3d1329824589f61432 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 2.8E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_08655 fc92dab0ee69ab3d1329824589f61432 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.8E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_13550 3422047b6e3ccee2ec30c42d9898d4d4 109 Gene3D G3DSA:3.10.620.30 28 109 7.0E-15 T 13-10-2018 ambt_21820 ad565bcf8c12761e81053bd5fb4ddbac 1284 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 897 1238 6.0E-53 T 13-10-2018 IPR007452 Translocation and assembly module TamB ambt_10180 20122719e91d79f610a1e4e5f705730a 397 Gene3D G3DSA:3.40.50.150 181 395 1.6E-67 T 13-10-2018 ambt_10180 20122719e91d79f610a1e4e5f705730a 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 395 67.291 T 13-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 ambt_10180 20122719e91d79f610a1e4e5f705730a 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 125 340 1.5E-25 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 ambt_10180 20122719e91d79f610a1e4e5f705730a 397 SMART SM00359 3 88 7.5E-10 T 13-10-2018 IPR002478 PUA domain GO:0003723 ambt_10180 20122719e91d79f610a1e4e5f705730a 397 Gene3D G3DSA:3.30.750.80 73 180 1.7E-33 T 13-10-2018 ambt_10180 20122719e91d79f610a1e4e5f705730a 397 Gene3D G3DSA:2.30.130.10 1 72 8.7E-29 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 ambt_10180 20122719e91d79f610a1e4e5f705730a 397 SUPERFAMILY SSF88697 4 72 8.95E-16 T 13-10-2018 IPR015947 PUA-like superfamily ambt_10180 20122719e91d79f610a1e4e5f705730a 397 SUPERFAMILY SSF53335 79 391 2.5E-67 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_15385 fda3fe825ad404e59630c0d18324008c 341 SUPERFAMILY SSF103039 143 333 1.48E-39 T 13-10-2018 IPR028976 CheC-like superfamily ambt_15385 fda3fe825ad404e59630c0d18324008c 341 Gene3D G3DSA:3.40.50.2300 2 136 2.1E-29 T 13-10-2018 ambt_15385 fda3fe825ad404e59630c0d18324008c 341 Gene3D G3DSA:3.40.1550.10 142 339 2.4E-37 T 13-10-2018 IPR028976 CheC-like superfamily ambt_15385 fda3fe825ad404e59630c0d18324008c 341 Pfam PF00072 Response regulator receiver domain 5 115 8.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_15385 fda3fe825ad404e59630c0d18324008c 341 SMART SM00448 3 115 1.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_15385 fda3fe825ad404e59630c0d18324008c 341 SUPERFAMILY SSF52172 4 118 3.13E-30 T 13-10-2018 IPR011006 CheY-like superfamily ambt_07210 39e84c28f5605806c2deb1e214a858a4 453 Gene3D G3DSA:1.20.1600.10 16 440 1.1E-47 T 13-10-2018 ambt_07210 39e84c28f5605806c2deb1e214a858a4 453 SUPERFAMILY SSF56954 4 436 7.32E-50 T 13-10-2018 ambt_07210 39e84c28f5605806c2deb1e214a858a4 453 Pfam PF02321 Outer membrane efflux protein 30 213 1.3E-11 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_07210 39e84c28f5605806c2deb1e214a858a4 453 Pfam PF02321 Outer membrane efflux protein 255 437 3.7E-13 T 13-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 ambt_17900 1e118a106b36f269af3170bd14be9e18 275 SUPERFAMILY SSF53213 3 273 8.11E-63 T 13-10-2018 ambt_17900 1e118a106b36f269af3170bd14be9e18 275 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 266 2.5E-36 T 13-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ambt_17900 1e118a106b36f269af3170bd14be9e18 275 Gene3D G3DSA:3.40.830.10 1 275 5.6E-72 T 13-10-2018 ambt_17085 8a6a76f0aea0a5e1371deebb66f1589b 551 SUPERFAMILY SSF55874 395 545 1.13E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_17085 8a6a76f0aea0a5e1371deebb66f1589b 551 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 436 545 1.4E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_17085 8a6a76f0aea0a5e1371deebb66f1589b 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 489 8.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_17085 8a6a76f0aea0a5e1371deebb66f1589b 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 544 8.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_17085 8a6a76f0aea0a5e1371deebb66f1589b 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 524 8.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_17085 8a6a76f0aea0a5e1371deebb66f1589b 551 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 503 8.1E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ambt_17085 8a6a76f0aea0a5e1371deebb66f1589b 551 Pfam PF00512 His Kinase A (phospho-acceptor) domain 308 383 2.0E-6 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ambt_17085 8a6a76f0aea0a5e1371deebb66f1589b 551 Gene3D G3DSA:3.30.565.10 395 550 1.6E-34 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_17085 8a6a76f0aea0a5e1371deebb66f1589b 551 SUPERFAMILY SSF47384 303 385 4.32E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ambt_17085 8a6a76f0aea0a5e1371deebb66f1589b 551 Gene3D G3DSA:1.10.287.130 286 386 5.9E-19 T 13-10-2018 ambt_17085 8a6a76f0aea0a5e1371deebb66f1589b 551 SMART SM00387 434 547 3.6E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ambt_18125 cff0231ee4aff9fe7cfd8a4468da0f18 131 SUPERFAMILY SSF52833 1 78 1.97E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_18125 cff0231ee4aff9fe7cfd8a4468da0f18 131 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 75 6.1E-15 T 13-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ambt_18125 cff0231ee4aff9fe7cfd8a4468da0f18 131 Gene3D G3DSA:3.40.30.10 1 83 1.3E-33 T 13-10-2018 ambt_04595 38728c4a033a2fad5e9154f114f19fde 131 Pfam PF01124 MAPEG family 6 124 1.4E-28 T 13-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein ambt_04595 38728c4a033a2fad5e9154f114f19fde 131 Gene3D G3DSA:1.20.120.550 3 130 1.9E-27 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily ambt_04595 38728c4a033a2fad5e9154f114f19fde 131 SUPERFAMILY SSF161084 3 127 2.09E-29 T 13-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily ambt_03410 8df31998a6ce3f497f850ea69e6e5682 271 SUPERFAMILY SSF75217 124 271 2.42E-27 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases ambt_03410 8df31998a6ce3f497f850ea69e6e5682 271 Gene3D G3DSA:3.40.1280.10 118 271 1.7E-32 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ambt_03410 8df31998a6ce3f497f850ea69e6e5682 271 SMART SM00967 23 105 4.1E-5 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ambt_03410 8df31998a6ce3f497f850ea69e6e5682 271 Gene3D G3DSA:3.30.1330.30 3 103 3.4E-13 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like ambt_03410 8df31998a6ce3f497f850ea69e6e5682 271 SUPERFAMILY SSF55315 4 102 4.59E-14 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like ambt_03410 8df31998a6ce3f497f850ea69e6e5682 271 Pfam PF00588 SpoU rRNA Methylase family 132 267 9.4E-25 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ambt_05730 82b1ae4fceb3ea19133e4f1eca729410 221 Pfam PF08892 YqcI/YcgG family 13 217 8.1E-62 T 13-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG ambt_11700 5a5c503a4dfc71c0989f9aeb604ab0b7 345 Pfam PF01594 AI-2E family transporter 10 323 4.0E-59 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like ambt_18665 48e02b6c7c2cd752ad46633cd72135b0 341 SUPERFAMILY SSF51735 141 305 6.66E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_18665 48e02b6c7c2cd752ad46633cd72135b0 341 SUPERFAMILY SSF50129 1 173 8.07E-52 T 13-10-2018 IPR011032 GroES-like superfamily ambt_18665 48e02b6c7c2cd752ad46633cd72135b0 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ambt_18665 48e02b6c7c2cd752ad46633cd72135b0 341 SMART SM00829 12 338 4.2E-4 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ambt_18665 48e02b6c7c2cd752ad46633cd72135b0 341 Gene3D G3DSA:3.40.50.720 153 286 2.7E-119 T 13-10-2018 ambt_18665 48e02b6c7c2cd752ad46633cd72135b0 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 3.2E-32 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ambt_18665 48e02b6c7c2cd752ad46633cd72135b0 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.3 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 ambt_18665 48e02b6c7c2cd752ad46633cd72135b0 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 4 340 2.4E-173 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 ambt_18665 48e02b6c7c2cd752ad46633cd72135b0 341 Gene3D G3DSA:3.90.180.10 20 328 2.7E-119 T 13-10-2018 ambt_18665 48e02b6c7c2cd752ad46633cd72135b0 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 3.5E-28 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ambt_01915 8511833e527bd2be0a6542fb41f613ce 117 Gene3D G3DSA:1.10.10.10 9 99 1.4E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_01915 8511833e527bd2be0a6542fb41f613ce 117 SMART SM00418 16 94 4.3E-30 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_01915 8511833e527bd2be0a6542fb41f613ce 117 SUPERFAMILY SSF46785 12 92 1.86E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_01915 8511833e527bd2be0a6542fb41f613ce 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 1.5E-22 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_01915 8511833e527bd2be0a6542fb41f613ce 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.5E-22 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_01915 8511833e527bd2be0a6542fb41f613ce 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 38 49 1.5E-22 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_01915 8511833e527bd2be0a6542fb41f613ce 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 1.5E-22 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_01915 8511833e527bd2be0a6542fb41f613ce 117 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 40 58 - T 13-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 ambt_01915 8511833e527bd2be0a6542fb41f613ce 117 Pfam PF01022 Bacterial regulatory protein, arsR family 24 68 2.2E-16 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ambt_03130 421bd24ae1e1d2cc351f7b08dff13e06 189 Gene3D G3DSA:3.30.160.670 28 188 1.5E-6 T 13-10-2018 ambt_03130 421bd24ae1e1d2cc351f7b08dff13e06 189 Pfam PF13590 Domain of unknown function (DUF4136) 38 187 1.6E-10 T 13-10-2018 IPR025411 Domain of unknown function DUF4136 ambt_18620 b1e34f8740b2d95e83aa63e5c8935119 135 Gene3D G3DSA:1.10.760.10 53 133 8.9E-33 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_18620 b1e34f8740b2d95e83aa63e5c8935119 135 SUPERFAMILY SSF46626 54 132 8.52E-17 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_18620 b1e34f8740b2d95e83aa63e5c8935119 135 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 56 131 4.1E-16 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_18620 b1e34f8740b2d95e83aa63e5c8935119 135 PRINTS PR00607 Class IE cytochrome C signature 106 118 6.8E-17 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ambt_18620 b1e34f8740b2d95e83aa63e5c8935119 135 PRINTS PR00607 Class IE cytochrome C signature 121 132 6.8E-17 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ambt_18620 b1e34f8740b2d95e83aa63e5c8935119 135 PRINTS PR00607 Class IE cytochrome C signature 77 87 6.8E-17 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ambt_18620 b1e34f8740b2d95e83aa63e5c8935119 135 PRINTS PR00607 Class IE cytochrome C signature 66 77 6.8E-17 T 13-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 ambt_01635 dbc4bbf22d08ea98c95a1d221b6f56d6 193 Gene3D G3DSA:3.40.630.30 1 174 3.2E-10 T 13-10-2018 ambt_01635 dbc4bbf22d08ea98c95a1d221b6f56d6 193 SUPERFAMILY SSF55729 9 163 1.39E-14 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_06740 22e8827df12f95e2447a7c06dc800bf1 223 SMART SM00702 35 210 1.8E-15 T 13-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 ambt_06740 22e8827df12f95e2447a7c06dc800bf1 223 Gene3D G3DSA:2.60.120.620 20 213 6.6E-45 T 13-10-2018 ambt_06740 22e8827df12f95e2447a7c06dc800bf1 223 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 119 210 7.8E-20 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ambt_00970 c77ead595c86a14cf3b3e22d4370ce70 578 SMART SM00332 2 240 1.3E-7 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_00970 c77ead595c86a14cf3b3e22d4370ce70 578 SUPERFAMILY SSF81606 4 242 6.28E-39 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_00970 c77ead595c86a14cf3b3e22d4370ce70 578 SMART SM00331 15 242 8.5E-9 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_00970 c77ead595c86a14cf3b3e22d4370ce70 578 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 454 486 2.6E-5 T 13-10-2018 IPR011096 FTP domain ambt_00970 c77ead595c86a14cf3b3e22d4370ce70 578 Gene3D G3DSA:3.60.40.10 2 243 6.2E-40 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ambt_00970 c77ead595c86a14cf3b3e22d4370ce70 578 Pfam PF13672 Protein phosphatase 2C 10 204 6.9E-11 T 13-10-2018 ambt_11985 e64862c36c4ef97c0781d427d2f81819 437 SUPERFAMILY SSF51197 97 361 5.63E-40 T 13-10-2018 ambt_11985 e64862c36c4ef97c0781d427d2f81819 437 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 106 348 1.4E-18 T 13-10-2018 IPR008775 Phytanoyl-CoA dioxygenase ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 Pfam PF03705 CheR methyltransferase, all-alpha domain 19 69 9.1E-15 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 PRINTS PR00996 Glutamate methyltransferase family signature 215 229 6.0E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 PRINTS PR00996 Glutamate methyltransferase family signature 234 257 6.0E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 PRINTS PR00996 Glutamate methyltransferase family signature 76 88 6.0E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 PRINTS PR00996 Glutamate methyltransferase family signature 109 129 6.0E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 6.0E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 PRINTS PR00996 Glutamate methyltransferase family signature 39 52 6.0E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 Gene3D G3DSA:1.10.155.10 6 81 1.8E-23 T 13-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 Pfam PF01739 CheR methyltransferase, SAM binding domain 83 268 1.3E-55 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 Gene3D G3DSA:3.40.50.150 82 275 1.2E-61 T 13-10-2018 ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 SMART SM00138 17 275 3.6E-89 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 SUPERFAMILY SSF53335 83 272 9.61E-51 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 SUPERFAMILY SSF47757 9 82 9.15E-20 T 13-10-2018 ambt_16730 8d5a138f6904d637d6528c3de2e9684a 276 PIRSF PIRSF000410 1 276 3.6E-90 T 13-10-2018 IPR026024 Chemotaxis protein methyltransferase CheR ambt_13965 5ce83bbd6c2ff8ed24a7e16950679304 162 Pfam PF02464 Competence-damaged protein 8 159 2.8E-52 T 13-10-2018 IPR008136 CinA, C-terminal ambt_13965 5ce83bbd6c2ff8ed24a7e16950679304 162 Gene3D G3DSA:3.90.950.20 1 161 6.4E-55 T 13-10-2018 IPR036653 CinA-like, C-terminal ambt_13965 5ce83bbd6c2ff8ed24a7e16950679304 162 SUPERFAMILY SSF142433 4 160 9.81E-51 T 13-10-2018 IPR036653 CinA-like, C-terminal ambt_13965 5ce83bbd6c2ff8ed24a7e16950679304 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 160 9.6E-48 T 13-10-2018 IPR008136 CinA, C-terminal ambt_02000 951323b06afebe38c6aacddc91e6408d 511 SUPERFAMILY SSF49899 36 349 1.42E-43 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ambt_02000 951323b06afebe38c6aacddc91e6408d 511 Pfam PF08787 Alginate lyase 36 348 1.6E-76 T 13-10-2018 IPR014895 Alginate lyase 2 ambt_02000 951323b06afebe38c6aacddc91e6408d 511 Gene3D G3DSA:2.60.120.1610 40 356 5.5E-96 T 13-10-2018 ambt_02000 951323b06afebe38c6aacddc91e6408d 511 SUPERFAMILY SSF160574 371 466 4.84E-10 T 13-10-2018 ambt_05380 f0e945bb77deab4c7560b7eae1882da9 203 Gene3D G3DSA:3.40.50.300 1 192 1.4E-9 T 13-10-2018 ambt_05380 f0e945bb77deab4c7560b7eae1882da9 203 SUPERFAMILY SSF52540 1 181 3.24E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_01435 0ee6564c65a779f08504e805fb9ecaac 382 Pfam PF13416 Bacterial extracellular solute-binding protein 20 291 1.9E-13 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein ambt_01435 0ee6564c65a779f08504e805fb9ecaac 382 Gene3D G3DSA:3.40.190.10 126 263 5.1E-22 T 13-10-2018 ambt_01435 0ee6564c65a779f08504e805fb9ecaac 382 SUPERFAMILY SSF53850 7 380 1.32E-45 T 13-10-2018 ambt_01435 0ee6564c65a779f08504e805fb9ecaac 382 Gene3D G3DSA:3.40.190.10 20 316 5.1E-22 T 13-10-2018 ambt_03800 4013368b2f77296a68a45545d8795a50 370 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 362 56.558 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ambt_03800 4013368b2f77296a68a45545d8795a50 370 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 365 7.2E-167 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ambt_03800 4013368b2f77296a68a45545d8795a50 370 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 359 3.9E-92 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ambt_03800 4013368b2f77296a68a45545d8795a50 370 Gene3D G3DSA:3.20.20.105 1 365 4.1E-168 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ambt_03800 4013368b2f77296a68a45545d8795a50 370 SUPERFAMILY SSF51713 1 362 1.96E-162 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ambt_03800 4013368b2f77296a68a45545d8795a50 370 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 365 1.7E-174 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ambt_05055 cca0d6203cf1c7a568469046fedd2b73 1570 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1526 1569 1.6E-13 T 13-10-2018 IPR020011 Motility protein FimV, C-terminal ambt_05055 cca0d6203cf1c7a568469046fedd2b73 1570 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 53 125 7.0E-26 T 13-10-2018 IPR020012 Motility protein FimV, N-terminal ambt_00185 73d3c5868565a99f55584112e5c2e31b 330 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 330 70.34 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_00185 73d3c5868565a99f55584112e5c2e31b 330 SUPERFAMILY SSF56194 195 324 4.45E-42 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_00185 73d3c5868565a99f55584112e5c2e31b 330 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 199 322 2.0E-30 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_00185 73d3c5868565a99f55584112e5c2e31b 330 Gene3D G3DSA:3.90.78.10 212 329 1.1E-39 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_00185 73d3c5868565a99f55584112e5c2e31b 330 SUPERFAMILY SSF56176 4 190 1.19E-37 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ambt_00185 73d3c5868565a99f55584112e5c2e31b 330 Gene3D G3DSA:3.30.465.10 64 211 9.5E-51 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ambt_00185 73d3c5868565a99f55584112e5c2e31b 330 Gene3D G3DSA:3.30.43.10 3 63 1.7E-12 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 ambt_00185 73d3c5868565a99f55584112e5c2e31b 330 Pfam PF01565 FAD binding domain 34 135 3.3E-16 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ambt_00185 73d3c5868565a99f55584112e5c2e31b 330 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 4 323 1.5E-71 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ambt_02835 2ca4a6ce621f13f3c361beae9aeb8003 349 PIRSF PIRSF029594 11 348 2.2E-106 T 13-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 ambt_02835 2ca4a6ce621f13f3c361beae9aeb8003 349 Pfam PF11168 Protein of unknown function (DUF2955) 18 159 5.5E-42 T 13-10-2018 IPR022604 Protein of unknown function DUF2955 ambt_15520 9cffbd1e0746bc3258e4eca6312f4f29 162 PRINTS PR00070 Dihydrofolate reductase signature 92 106 3.7E-16 T 13-10-2018 ambt_15520 9cffbd1e0746bc3258e4eca6312f4f29 162 PRINTS PR00070 Dihydrofolate reductase signature 10 20 3.7E-16 T 13-10-2018 ambt_15520 9cffbd1e0746bc3258e4eca6312f4f29 162 PRINTS PR00070 Dihydrofolate reductase signature 37 48 3.7E-16 T 13-10-2018 ambt_15520 9cffbd1e0746bc3258e4eca6312f4f29 162 PRINTS PR00070 Dihydrofolate reductase signature 24 32 3.7E-16 T 13-10-2018 ambt_15520 9cffbd1e0746bc3258e4eca6312f4f29 162 PIRSF PIRSF000194 1 162 3.6E-62 T 13-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 ambt_15520 9cffbd1e0746bc3258e4eca6312f4f29 162 Gene3D G3DSA:3.40.430.10 1 162 3.9E-59 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ambt_15520 9cffbd1e0746bc3258e4eca6312f4f29 162 SUPERFAMILY SSF53597 1 161 9.95E-57 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ambt_15520 9cffbd1e0746bc3258e4eca6312f4f29 162 Pfam PF00186 Dihydrofolate reductase 1 161 1.5E-59 T 13-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 ambt_15520 9cffbd1e0746bc3258e4eca6312f4f29 162 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 10 32 - T 13-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 ambt_21965 e598a5289a62fb82081a2ac1faa2ae40 123 SMART SM00530 60 114 0.0068 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_21965 e598a5289a62fb82081a2ac1faa2ae40 123 Gene3D G3DSA:1.10.260.40 52 117 2.7E-7 T 13-10-2018 ambt_21965 e598a5289a62fb82081a2ac1faa2ae40 123 SUPERFAMILY SSF47413 48 115 8.44E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_19025 c055ac88b8901e4d83ed0fd58f6968d6 327 Gene3D G3DSA:3.40.50.300 4 279 1.4E-5 T 13-10-2018 ambt_19025 c055ac88b8901e4d83ed0fd58f6968d6 327 SUPERFAMILY SSF52540 2 207 2.48E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14690 db48e78c7bad49ebdb59aaed8931644b 398 Gene3D G3DSA:2.60.40.3120 13 136 3.3E-6 T 13-10-2018 ambt_14690 db48e78c7bad49ebdb59aaed8931644b 398 SMART SM00631 141 367 4.8E-4 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_14690 db48e78c7bad49ebdb59aaed8931644b 398 Pfam PF00246 Zinc carboxypeptidase 144 294 8.1E-17 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ambt_14690 db48e78c7bad49ebdb59aaed8931644b 398 Gene3D G3DSA:3.40.630.10 140 380 1.8E-37 T 13-10-2018 ambt_14690 db48e78c7bad49ebdb59aaed8931644b 398 SUPERFAMILY SSF53187 141 355 1.82E-40 T 13-10-2018 ambt_05840 d52487335d3c8d843caf5a79cc864b1e 284 Gene3D G3DSA:2.70.98.10 1 282 5.1E-73 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 ambt_05840 d52487335d3c8d843caf5a79cc864b1e 284 Pfam PF01263 Aldose 1-epimerase 19 278 1.1E-34 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 ambt_05840 d52487335d3c8d843caf5a79cc864b1e 284 PIRSF PIRSF016020 2 283 1.6E-46 T 13-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 ambt_05840 d52487335d3c8d843caf5a79cc864b1e 284 SUPERFAMILY SSF74650 6 279 4.46E-58 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ambt_19840 0b9a002a3b1ec75e9b60115e9a4a5c9e 533 Pfam PF03806 AbgT putative transporter family 23 531 4.8E-215 T 13-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 ambt_18465 6944a60481b96a1e71767391f14a4031 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 6.1E-107 T 13-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ambt_18465 6944a60481b96a1e71767391f14a4031 255 Gene3D G3DSA:3.20.20.70 1 253 1.3E-106 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_18465 6944a60481b96a1e71767391f14a4031 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 41.361 T 13-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ambt_18465 6944a60481b96a1e71767391f14a4031 255 SUPERFAMILY SSF110399 1 235 1.18E-79 T 13-10-2018 ambt_10015 63e1813295cc3a341dfedcc3d7e1bca9 215 Hamap MF_00528 Septum formation protein Maf [maf]. 3 207 23.735 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 ambt_10015 63e1813295cc3a341dfedcc3d7e1bca9 215 SUPERFAMILY SSF52972 2 200 6.41E-49 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ambt_10015 63e1813295cc3a341dfedcc3d7e1bca9 215 PIRSF PIRSF006305 1 207 2.1E-40 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 ambt_10015 63e1813295cc3a341dfedcc3d7e1bca9 215 Gene3D G3DSA:3.90.950.10 2 207 4.7E-53 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ambt_10015 63e1813295cc3a341dfedcc3d7e1bca9 215 Pfam PF02545 Maf-like protein 4 201 1.5E-41 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 ambt_10015 63e1813295cc3a341dfedcc3d7e1bca9 215 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 199 2.9E-42 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 ambt_05250 bfc550bb3c1ff1f5a8c02e1292b07282 72 Pfam PF12728 Helix-turn-helix domain 5 67 1.3E-8 T 13-10-2018 ambt_20830 e6c8bcfdcb5d3f43e63574750e04ab09 291 Pfam PF11920 Protein of unknown function (DUF3438) 131 275 1.2E-27 T 13-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 ambt_20830 e6c8bcfdcb5d3f43e63574750e04ab09 291 Pfam PF11920 Protein of unknown function (DUF3438) 19 138 3.0E-19 T 13-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 ambt_20830 e6c8bcfdcb5d3f43e63574750e04ab09 291 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 31 275 8.1E-57 T 13-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 ambt_17090 f08556ac4e6c3f12f3f5dc5acdb9a058 235 SMART SM00448 4 114 8.2E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_17090 f08556ac4e6c3f12f3f5dc5acdb9a058 235 Pfam PF00072 Response regulator receiver domain 6 113 9.8E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_17090 f08556ac4e6c3f12f3f5dc5acdb9a058 235 SUPERFAMILY SSF52172 2 123 1.42E-35 T 13-10-2018 IPR011006 CheY-like superfamily ambt_17090 f08556ac4e6c3f12f3f5dc5acdb9a058 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 1.3E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_17090 f08556ac4e6c3f12f3f5dc5acdb9a058 235 Gene3D G3DSA:1.10.10.10 123 233 2.3E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_17090 f08556ac4e6c3f12f3f5dc5acdb9a058 235 SUPERFAMILY SSF46894 133 230 2.21E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_17090 f08556ac4e6c3f12f3f5dc5acdb9a058 235 Gene3D G3DSA:3.40.50.2300 1 122 1.1E-32 T 13-10-2018 ambt_17090 f08556ac4e6c3f12f3f5dc5acdb9a058 235 SMART SM00862 153 229 8.7E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ambt_04770 4c3e81a82c16cc9cf8ab40dad0a9e286 99 Gene3D G3DSA:3.10.510.20 1 75 3.6E-28 T 13-10-2018 IPR038068 YcgL-like superfamily ambt_04770 4c3e81a82c16cc9cf8ab40dad0a9e286 99 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 2 82 5.0E-18 T 13-10-2018 IPR027354 YcgL domain ambt_04770 4c3e81a82c16cc9cf8ab40dad0a9e286 99 Pfam PF05166 YcgL domain 4 76 1.9E-29 T 13-10-2018 IPR027354 YcgL domain ambt_04770 4c3e81a82c16cc9cf8ab40dad0a9e286 99 SUPERFAMILY SSF160191 2 92 1.7E-33 T 13-10-2018 IPR038068 YcgL-like superfamily ambt_04770 4c3e81a82c16cc9cf8ab40dad0a9e286 99 Hamap MF_01866 Protein YcgL [ycgL]. 2 89 25.366 T 13-10-2018 IPR027354 YcgL domain ambt_02670 1fc80f1486dd74fce2d9127241d65889 372 Gene3D G3DSA:3.40.50.720 150 337 2.3E-152 T 13-10-2018 ambt_02670 1fc80f1486dd74fce2d9127241d65889 372 SUPERFAMILY SSF51735 144 263 1.2E-17 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_02670 1fc80f1486dd74fce2d9127241d65889 372 Pfam PF00107 Zinc-binding dehydrogenase 181 262 1.5E-8 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ambt_02670 1fc80f1486dd74fce2d9127241d65889 372 Gene3D G3DSA:3.90.180.10 6 371 2.3E-152 T 13-10-2018 ambt_02670 1fc80f1486dd74fce2d9127241d65889 372 SUPERFAMILY SSF50129 16 182 3.27E-22 T 13-10-2018 IPR011032 GroES-like superfamily ambt_03865 d2241e649a19d1dc379522a0b66e6565 1115 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 391 466 7.3E-8 T 13-10-2018 ambt_03865 d2241e649a19d1dc379522a0b66e6565 1115 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 88 164 7.4E-9 T 13-10-2018 ambt_03865 d2241e649a19d1dc379522a0b66e6565 1115 Gene3D G3DSA:2.130.10.130 58 182 4.5E-7 T 13-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 ambt_03865 d2241e649a19d1dc379522a0b66e6565 1115 SUPERFAMILY SSF69318 72 486 3.14E-31 T 13-10-2018 ambt_21760 3e4b419b47e8e42e527d7cad9bc68545 135 Gene3D G3DSA:3.40.630.30 2 124 7.8E-22 T 13-10-2018 ambt_21760 3e4b419b47e8e42e527d7cad9bc68545 135 SUPERFAMILY SSF55729 19 117 9.57E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_21760 3e4b419b47e8e42e527d7cad9bc68545 135 Pfam PF13508 Acetyltransferase (GNAT) domain 24 107 1.2E-8 T 13-10-2018 IPR000182 GNAT domain ambt_06980 7a3e8bd1a6fbe82806fbb0d3118b8093 946 Pfam PF00593 TonB dependent receptor 405 945 1.6E-42 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_06980 7a3e8bd1a6fbe82806fbb0d3118b8093 946 SUPERFAMILY SSF56935 24 945 3.66E-93 T 13-10-2018 ambt_06980 7a3e8bd1a6fbe82806fbb0d3118b8093 946 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 164 7.3E-20 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_06980 7a3e8bd1a6fbe82806fbb0d3118b8093 946 Gene3D G3DSA:2.170.130.10 31 168 7.7E-36 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_16270 e739bb5b34149be6bcc33439f6295cc3 768 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 747 32.873 T 13-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ambt_16270 e739bb5b34149be6bcc33439f6295cc3 768 Gene3D G3DSA:2.120.10.90 504 757 3.4E-9 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ambt_16270 e739bb5b34149be6bcc33439f6295cc3 768 SUPERFAMILY SSF101904 501 749 2.22E-49 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ambt_16270 e739bb5b34149be6bcc33439f6295cc3 768 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 471 8.2E-130 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_16270 e739bb5b34149be6bcc33439f6295cc3 768 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 687 3.9E-6 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ambt_16270 e739bb5b34149be6bcc33439f6295cc3 768 SMART SM00434 15 465 1.5E-220 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ambt_16270 e739bb5b34149be6bcc33439f6295cc3 768 Gene3D G3DSA:1.10.268.10 373 458 5.3E-173 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ambt_16270 e739bb5b34149be6bcc33439f6295cc3 768 Gene3D G3DSA:3.30.1360.40 242 335 5.3E-173 T 13-10-2018 ambt_16270 e739bb5b34149be6bcc33439f6295cc3 768 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 12 746 0.0 T 13-10-2018 ambt_16270 e739bb5b34149be6bcc33439f6295cc3 768 Gene3D G3DSA:3.90.199.10 36 487 5.3E-173 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ambt_16270 e739bb5b34149be6bcc33439f6295cc3 768 SUPERFAMILY SSF56719 35 487 3.14E-151 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ambt_06305 617cf02b6268999089510d7ceaa853eb 94 Pfam PF04221 RelB antitoxin 5 78 6.2E-5 T 13-10-2018 IPR007337 RelB antitoxin/Antitoxin DinJ ambt_11060 5ad3f797f54f692a72c22ea4c5067e21 433 Gene3D G3DSA:3.20.20.450 172 428 6.2E-80 T 13-10-2018 IPR035919 EAL domain superfamily ambt_11060 5ad3f797f54f692a72c22ea4c5067e21 433 SMART SM00052 170 415 1.2E-83 T 13-10-2018 IPR001633 EAL domain ambt_11060 5ad3f797f54f692a72c22ea4c5067e21 433 SUPERFAMILY SSF141868 177 422 4.71E-75 T 13-10-2018 IPR035919 EAL domain superfamily ambt_11060 5ad3f797f54f692a72c22ea4c5067e21 433 Pfam PF00990 Diguanylate cyclase, GGDEF domain 4 153 1.0E-20 T 13-10-2018 IPR000160 GGDEF domain ambt_11060 5ad3f797f54f692a72c22ea4c5067e21 433 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 5 156 3.6E-10 T 13-10-2018 IPR000160 GGDEF domain ambt_11060 5ad3f797f54f692a72c22ea4c5067e21 433 SUPERFAMILY SSF55073 10 161 2.12E-24 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_11060 5ad3f797f54f692a72c22ea4c5067e21 433 Pfam PF00563 EAL domain 177 409 1.2E-60 T 13-10-2018 IPR001633 EAL domain ambt_11060 5ad3f797f54f692a72c22ea4c5067e21 433 Gene3D G3DSA:3.30.70.270 1 171 1.1E-24 T 13-10-2018 ambt_11060 5ad3f797f54f692a72c22ea4c5067e21 433 SMART SM00267 1 160 1.6E-11 T 13-10-2018 IPR000160 GGDEF domain ambt_16265 f1ae73603d9c9a7be76acae82aa4935d 178 Pfam PF07700 Haem-NO-binding 3 159 1.6E-33 T 13-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 ambt_16265 f1ae73603d9c9a7be76acae82aa4935d 178 Gene3D G3DSA:3.90.1520.10 1 177 5.5E-49 T 13-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 ambt_16265 f1ae73603d9c9a7be76acae82aa4935d 178 SUPERFAMILY SSF111126 1 163 1.57E-35 T 13-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily ambt_05245 5bd53a88b05cf1568696b07fe3f21b85 354 Gene3D G3DSA:1.10.340.50 192 328 1.5E-11 T 13-10-2018 ambt_05245 5bd53a88b05cf1568696b07fe3f21b85 354 Pfam PF08708 Primase C terminal 1 (PriCT-1) 192 268 1.9E-9 T 13-10-2018 IPR014820 Primase, C-terminal 1 ambt_05245 5bd53a88b05cf1568696b07fe3f21b85 354 Pfam PF03090 Replicase family 43 176 1.3E-41 T 13-10-2018 IPR004322 Plasmid replicase, bacterial ambt_20150 976bc338e485e0642d274150820e23b8 993 Gene3D G3DSA:2.170.130.10 55 180 2.2E-17 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_20150 976bc338e485e0642d274150820e23b8 993 SUPERFAMILY SSF56935 44 993 2.5E-74 T 13-10-2018 ambt_20150 976bc338e485e0642d274150820e23b8 993 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 175 7.7E-17 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_20150 976bc338e485e0642d274150820e23b8 993 Pfam PF00593 TonB dependent receptor 421 992 4.1E-28 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_20150 976bc338e485e0642d274150820e23b8 993 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 54 993 3.0E-182 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor ambt_08265 3b2d44e8014ddd34cf855902bbb6987b 219 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 211 1.4E-54 T 13-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain ambt_21675 4d30812496cf04035ec89e74c65cbbd2 217 Gene3D G3DSA:3.40.50.150 9 193 2.5E-25 T 13-10-2018 ambt_21675 4d30812496cf04035ec89e74c65cbbd2 217 Pfam PF13489 Methyltransferase domain 52 154 3.3E-12 T 13-10-2018 ambt_21675 4d30812496cf04035ec89e74c65cbbd2 217 SUPERFAMILY SSF53335 28 200 2.01E-24 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_03435 58f5e2211c4129d9dbdd5ea5d917660d 162 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 12 139 6.1E-48 T 13-10-2018 IPR027565 Cupin fold metalloprotein, WbuC family ambt_03435 58f5e2211c4129d9dbdd5ea5d917660d 162 Gene3D G3DSA:2.60.120.10 11 135 4.3E-9 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_03435 58f5e2211c4129d9dbdd5ea5d917660d 162 SUPERFAMILY SSF51182 29 138 5.4E-15 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_03400 0fe19cff17fb0abba74a699b129515c5 553 Gene3D G3DSA:3.50.50.60 482 548 3.2E-15 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_03400 0fe19cff17fb0abba74a699b129515c5 553 Gene3D G3DSA:3.50.50.60 85 320 1.0E-80 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_03400 0fe19cff17fb0abba74a699b129515c5 553 Gene3D G3DSA:3.30.70.2700 1 80 1.3E-24 T 13-10-2018 ambt_03400 0fe19cff17fb0abba74a699b129515c5 553 SUPERFAMILY SSF51905 100 543 2.41E-29 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_03400 0fe19cff17fb0abba74a699b129515c5 553 PIRSF PIRSF038984 1 550 3.8E-234 T 13-10-2018 IPR028348 FAD dependent protein ambt_11540 87c407d51040dc85e29439463c7230d9 431 Pfam PF02447 GntP family permease 5 252 1.2E-11 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ambt_16210 6a601b6a6255e06cd633c1e795b33db9 240 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 227 7.6E-46 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 ambt_16210 6a601b6a6255e06cd633c1e795b33db9 240 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 27 219 5.2E-28 T 13-10-2018 IPR010239 Conserved hypothetical protein CHP02001 ambt_00635 2670cebb6239d5acdf6170e348797c65 165 Pfam PF04134 Protein of unknown function, DUF393 3 110 1.9E-26 T 13-10-2018 IPR007263 Protein of unknown function DUF393 ambt_18340 cb074e2c663e83c7f3944c0ca74a3b7c 255 Gene3D G3DSA:3.40.50.10090 43 176 4.0E-45 T 13-10-2018 ambt_18340 cb074e2c663e83c7f3944c0ca74a3b7c 255 Gene3D G3DSA:3.40.50.10090 14 245 4.0E-45 T 13-10-2018 ambt_18340 cb074e2c663e83c7f3944c0ca74a3b7c 255 SUPERFAMILY SSF69618 13 251 6.8E-34 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_18340 cb074e2c663e83c7f3944c0ca74a3b7c 255 Pfam PF02602 Uroporphyrinogen-III synthase HemD 27 247 1.3E-25 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ambt_17280 088fa1052efff868f0218ac663896798 513 Gene3D G3DSA:3.50.50.60 1 512 9.5E-172 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_17280 088fa1052efff868f0218ac663896798 513 Pfam PF04820 Tryptophan halogenase 7 466 2.4E-113 T 13-10-2018 IPR006905 Flavin-dependent halogenase ambt_17280 088fa1052efff868f0218ac663896798 513 PIRSF PIRSF011396 1 513 2.1E-151 T 13-10-2018 IPR033856 Flavin-dependent tryptophan halogenase ambt_17280 088fa1052efff868f0218ac663896798 513 SUPERFAMILY SSF51905 6 433 3.54E-26 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_03510 75f27e2afbf152fac93e7999c6f6b400 88 Pfam PF11280 Protein of unknown function (DUF3081) 5 81 2.0E-31 T 13-10-2018 IPR021432 Protein of unknown function DUF3081 ambt_20185 0605950e5c1a65cfc1cc456b408991e2 526 PIRSF PIRSF006446 1 519 1.6E-146 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ambt_20185 0605950e5c1a65cfc1cc456b408991e2 526 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 8 502 6.6E-176 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ambt_09965 7f9d8952989c04c27adfdc3fa2b5345f 337 Gene3D G3DSA:3.30.160.60 306 337 5.6E-11 T 13-10-2018 ambt_09965 7f9d8952989c04c27adfdc3fa2b5345f 337 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 10 332 7.2E-88 T 13-10-2018 IPR003770 Endolytic murein transglycosylase ambt_09965 7f9d8952989c04c27adfdc3fa2b5345f 337 Gene3D G3DSA:1.10.8.1150 28 99 7.3E-6 T 13-10-2018 ambt_09965 7f9d8952989c04c27adfdc3fa2b5345f 337 Pfam PF02618 YceG-like family 33 331 1.4E-80 T 13-10-2018 IPR003770 Endolytic murein transglycosylase ambt_09965 7f9d8952989c04c27adfdc3fa2b5345f 337 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 1 337 31.565 T 13-10-2018 IPR003770 Endolytic murein transglycosylase ambt_06460 af92f2f2e94ed060c8447416aaa2af55 373 Gene3D G3DSA:3.40.630.10 14 293 4.3E-127 T 13-10-2018 ambt_06460 af92f2f2e94ed060c8447416aaa2af55 373 Gene3D G3DSA:2.40.50.100 294 364 4.3E-127 T 13-10-2018 ambt_06460 af92f2f2e94ed060c8447416aaa2af55 373 SUPERFAMILY SSF53187 10 355 3.11E-36 T 13-10-2018 ambt_06460 af92f2f2e94ed060c8447416aaa2af55 373 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 33 366 2.0E-48 T 13-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 ambt_16645 62149262d68d5e365b4bc3cd36563ae7 107 Pfam PF11872 Protein of unknown function (DUF3392) 2 104 4.8E-36 T 13-10-2018 IPR021813 Protein of unknown function DUF3392 ambt_02655 943d64a68fce5de327f29a0a16c8f4a1 822 Pfam PF02687 FtsX-like permease family 316 404 8.9E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ambt_02655 943d64a68fce5de327f29a0a16c8f4a1 822 Pfam PF02687 FtsX-like permease family 728 815 1.3E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ambt_10820 a4803390528df8b2b10370d71f20c2e8 85 Gene3D G3DSA:2.60.460.20 18 81 1.4E-5 T 13-10-2018 ambt_22180 860085f316c68d53247f8040b4ce18e5 277 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 41 271 5.3E-40 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22180 860085f316c68d53247f8040b4ce18e5 277 Gene3D G3DSA:1.20.120.220 95 277 7.0E-54 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22180 860085f316c68d53247f8040b4ce18e5 277 ProSitePatterns PS00449 ATP synthase a subunit signature. 214 223 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22180 860085f316c68d53247f8040b4ce18e5 277 Pfam PF00119 ATP synthase A chain 48 271 2.5E-51 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22180 860085f316c68d53247f8040b4ce18e5 277 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 277 15.409 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_22180 860085f316c68d53247f8040b4ce18e5 277 SUPERFAMILY SSF81336 97 271 1.22E-39 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ambt_13425 a38a086b1a4a2ace45ba1935ee2e13c0 477 Pfam PF07196 Flagellin hook IN motif 134 191 1.0E-10 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 ambt_13425 a38a086b1a4a2ace45ba1935ee2e13c0 477 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 230 467 1.9E-40 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 ambt_13425 a38a086b1a4a2ace45ba1935ee2e13c0 477 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 110 6.1E-21 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 ambt_12975 03607775328d891d5b74b173d6020c89 362 Gene3D G3DSA:1.20.58.480 197 340 1.3E-24 T 13-10-2018 ambt_12975 03607775328d891d5b74b173d6020c89 362 Gene3D G3DSA:1.20.58.480 6 196 4.8E-67 T 13-10-2018 ambt_12975 03607775328d891d5b74b173d6020c89 362 SUPERFAMILY SSF140959 10 340 2.06E-77 T 13-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ambt_12975 03607775328d891d5b74b173d6020c89 362 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 3 340 33.621 T 13-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ambt_12975 03607775328d891d5b74b173d6020c89 362 Pfam PF03301 Tryptophan 2,3-dioxygenase 9 340 1.9E-101 T 13-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ambt_19165 6d4c7b7ee9c8821b06f745e791181500 83 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 4 76 1.9E-28 T 13-10-2018 IPR013468 Conserved hypothetical protein CHP02647 ambt_19165 6d4c7b7ee9c8821b06f745e791181500 83 Pfam PF06146 Phosphate-starvation-inducible E 10 67 4.0E-12 T 13-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like ambt_11040 6715bf74a36d865a4d1af2cbbf32528a 55 Pfam PF11446 Protein of unknown function (DUF2897) 5 51 7.1E-18 T 13-10-2018 IPR021550 Protein of unknown function DUF2897 ambt_01615 fa9dad513a1011f781eb9eb88d3277e8 372 Gene3D G3DSA:3.30.420.40 139 331 5.6E-125 T 13-10-2018 ambt_01615 fa9dad513a1011f781eb9eb88d3277e8 372 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 1 370 1.7E-130 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 ambt_01615 fa9dad513a1011f781eb9eb88d3277e8 372 SUPERFAMILY SSF53067 5 342 1.48E-23 T 13-10-2018 ambt_01615 fa9dad513a1011f781eb9eb88d3277e8 372 Gene3D G3DSA:3.30.420.40 2 366 5.6E-125 T 13-10-2018 ambt_01615 fa9dad513a1011f781eb9eb88d3277e8 372 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 371 35.519 T 13-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 ambt_06235 7621e97c938960174ec653f2b30a4767 152 Gene3D G3DSA:3.10.450.50 16 151 2.0E-8 T 13-10-2018 ambt_06235 7621e97c938960174ec653f2b30a4767 152 SUPERFAMILY SSF54427 22 148 1.09E-6 T 13-10-2018 IPR032710 NTF2-like domain superfamily ambt_13345 31fd6e41d3470709bfbbfa2f8acb1cd9 218 SUPERFAMILY SSF55729 21 157 2.66E-12 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_13345 31fd6e41d3470709bfbbfa2f8acb1cd9 218 Gene3D G3DSA:3.40.630.30 14 173 8.6E-24 T 13-10-2018 ambt_13345 31fd6e41d3470709bfbbfa2f8acb1cd9 218 TIGRFAM TIGR03585 PseH: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 24 165 9.5E-39 T 13-10-2018 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase ambt_13345 31fd6e41d3470709bfbbfa2f8acb1cd9 218 Pfam PF13302 Acetyltransferase (GNAT) domain 26 157 7.9E-7 T 13-10-2018 IPR000182 GNAT domain ambt_01920 9d648d041efe491cb7745d8c9a405f17 241 Gene3D G3DSA:3.90.190.10 72 222 3.0E-26 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like ambt_01920 9d648d041efe491cb7745d8c9a405f17 241 SUPERFAMILY SSF52799 81 211 5.74E-10 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like ambt_11315 49c96e00c2500cf67a6fdd19f7276fd1 398 Pfam PF13440 Polysaccharide biosynthesis protein 1 242 3.6E-35 T 13-10-2018 ambt_16115 9969cae955cf75521ef83e5a78854220 371 Pfam PF11017 Protein of unknown function (DUF2855) 36 360 6.9E-92 T 13-10-2018 IPR021276 Protein of unknown function DUF2855 ambt_06525 d6e658b644056d85fe5c524e09e9bb54 346 Pfam PF13478 XdhC Rossmann domain 193 334 6.0E-25 T 13-10-2018 IPR027051 XdhC Rossmann domain ambt_06525 d6e658b644056d85fe5c524e09e9bb54 346 Gene3D G3DSA:3.40.50.720 192 344 4.5E-32 T 13-10-2018 ambt_06525 d6e658b644056d85fe5c524e09e9bb54 346 Pfam PF02625 XdhC and CoxI family 17 80 5.6E-12 T 13-10-2018 IPR003777 XdhC- CoxI ambt_09460 da3e730e3d1d1b36cd72a25a5587cffe 52 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 13-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 ambt_09460 da3e730e3d1d1b36cd72a25a5587cffe 52 Pfam PF01679 Proteolipid membrane potential modulator 2 49 3.5E-24 T 13-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 ambt_01145 3784584d65807e083aea94bb02cb6fd5 586 Pfam PF00675 Insulinase (Peptidase family M16) 73 167 5.9E-8 T 13-10-2018 IPR011765 Peptidase M16, N-terminal ambt_01145 3784584d65807e083aea94bb02cb6fd5 586 Gene3D G3DSA:3.30.830.10 31 245 6.5E-21 T 13-10-2018 ambt_01145 3784584d65807e083aea94bb02cb6fd5 586 SUPERFAMILY SSF63411 64 247 8.49E-19 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ambt_13670 1a741bb5ce9fa35d76774755aae65dcb 450 Pfam PF13180 PDZ domain 212 285 1.4E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_13670 1a741bb5ce9fa35d76774755aae65dcb 450 Pfam PF02163 Peptidase family M50 10 436 3.2E-85 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 ambt_13670 1a741bb5ce9fa35d76774755aae65dcb 450 SUPERFAMILY SSF50156 86 185 4.86E-14 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 ambt_13670 1a741bb5ce9fa35d76774755aae65dcb 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 449 5.5E-134 T 13-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 ambt_13670 1a741bb5ce9fa35d76774755aae65dcb 450 Gene3D G3DSA:2.30.42.10 224 311 8.1E-20 T 13-10-2018 ambt_13670 1a741bb5ce9fa35d76774755aae65dcb 450 SUPERFAMILY SSF50156 209 287 1.97E-16 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 ambt_13670 1a741bb5ce9fa35d76774755aae65dcb 450 SMART SM00228 116 186 0.012 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_13670 1a741bb5ce9fa35d76774755aae65dcb 450 SMART SM00228 210 279 1.5E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 ambt_13670 1a741bb5ce9fa35d76774755aae65dcb 450 Gene3D G3DSA:2.30.42.10 126 219 8.1E-28 T 13-10-2018 ambt_09550 592a2fd9972c62861edd1f8c4926fa7d 371 Pfam PF01098 Cell cycle protein 23 367 2.1E-111 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_09550 592a2fd9972c62861edd1f8c4926fa7d 371 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 14 369 28.157 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_09550 592a2fd9972c62861edd1f8c4926fa7d 371 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 366 2.4E-134 T 13-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_09550 592a2fd9972c62861edd1f8c4926fa7d 371 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_15790 08853e2d105c6dbef0238e1b86425300 139 Gene3D G3DSA:3.10.180.10 1 135 1.6E-32 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_15790 08853e2d105c6dbef0238e1b86425300 139 SUPERFAMILY SSF54593 5 130 9.08E-21 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_13875 33ec20257854e65a1470055fdab34e2d 508 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 150 162 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 ambt_13875 33ec20257854e65a1470055fdab34e2d 508 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 10 493 9.9E-115 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 ambt_13875 33ec20257854e65a1470055fdab34e2d 508 SUPERFAMILY SSF103473 323 497 1.27E-10 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_13875 33ec20257854e65a1470055fdab34e2d 508 SUPERFAMILY SSF103473 15 304 3.27E-26 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_13875 33ec20257854e65a1470055fdab34e2d 508 Pfam PF00854 POT family 89 461 3.0E-62 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 ambt_13875 33ec20257854e65a1470055fdab34e2d 508 Gene3D G3DSA:1.20.1250.20 1 498 3.9E-128 T 13-10-2018 ambt_13875 33ec20257854e65a1470055fdab34e2d 508 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 ambt_14610 87551119b127b21c88f9f5cc4f166053 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.6E-33 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 ambt_14610 87551119b127b21c88f9f5cc4f166053 95 SUPERFAMILY SSF69754 1 95 2.22E-35 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like ambt_14610 87551119b127b21c88f9f5cc4f166053 95 Gene3D G3DSA:3.30.160.100 1 95 1.1E-36 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like ambt_14610 87551119b127b21c88f9f5cc4f166053 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 3.3E-28 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 ambt_15300 623349e30b1a3222802bf4dae9ed07bf 251 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 202 248 7.0E-6 T 13-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 ambt_15300 623349e30b1a3222802bf4dae9ed07bf 251 Gene3D G3DSA:3.60.21.10 1 250 3.8E-50 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like ambt_15300 623349e30b1a3222802bf4dae9ed07bf 251 Pfam PF00149 Calcineurin-like phosphoesterase 3 192 4.7E-12 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ambt_15300 623349e30b1a3222802bf4dae9ed07bf 251 SUPERFAMILY SSF56300 3 247 3.38E-35 T 13-10-2018 ambt_04800 1bd583d2096ef91507d9bcad27cf4a43 527 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 513 1.7E-260 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 ambt_04800 1bd583d2096ef91507d9bcad27cf4a43 527 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 513 1.2E-251 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 ambt_04800 1bd583d2096ef91507d9bcad27cf4a43 527 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 527 349.604 T 13-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 ambt_12760 2f646ddae3a6ddd4f7b176bc3be3ebfa 248 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 246 1.0E-137 T 13-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ambt_12760 2f646ddae3a6ddd4f7b176bc3be3ebfa 248 Pfam PF00472 RF-1 domain 111 220 5.3E-43 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ambt_12760 2f646ddae3a6ddd4f7b176bc3be3ebfa 248 Gene3D G3DSA:3.30.160.20 109 204 1.4E-96 T 13-10-2018 ambt_12760 2f646ddae3a6ddd4f7b176bc3be3ebfa 248 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 128 144 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ambt_12760 2f646ddae3a6ddd4f7b176bc3be3ebfa 248 SMART SM00937 1 78 2.2E-28 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 ambt_12760 2f646ddae3a6ddd4f7b176bc3be3ebfa 248 SUPERFAMILY SSF75620 1 245 1.44E-116 T 13-10-2018 ambt_12760 2f646ddae3a6ddd4f7b176bc3be3ebfa 248 Pfam PF03462 PCRF domain 4 102 2.3E-41 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 ambt_12760 2f646ddae3a6ddd4f7b176bc3be3ebfa 248 Gene3D G3DSA:3.30.70.1660 13 241 1.4E-96 T 13-10-2018 ambt_12930 4a5daa6cd941341a087d71d35d985dcd 452 PIRSF PIRSF037714 1 452 1.0E-177 T 13-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein ambt_12930 4a5daa6cd941341a087d71d35d985dcd 452 Pfam PF01618 MotA/TolQ/ExbB proton channel family 318 435 4.0E-28 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ambt_20945 19a6ec015657dbcfa173873e584cbcd2 164 Pfam PF11072 Protein of unknown function (DUF2859) 25 161 7.4E-40 T 13-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 ambt_20945 19a6ec015657dbcfa173873e584cbcd2 164 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 60 164 1.4E-30 T 13-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 ambt_11840 78e540d22eea7c76c0d932db982622b9 425 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ambt_11840 78e540d22eea7c76c0d932db982622b9 425 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 11 419 1.3E-182 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 ambt_11840 78e540d22eea7c76c0d932db982622b9 425 Gene3D G3DSA:3.40.640.10 59 329 5.3E-167 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_11840 78e540d22eea7c76c0d932db982622b9 425 SUPERFAMILY SSF53383 4 421 7.62E-127 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_11840 78e540d22eea7c76c0d932db982622b9 425 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 423 48.457 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 ambt_11840 78e540d22eea7c76c0d932db982622b9 425 Gene3D G3DSA:3.90.1150.10 8 414 5.3E-167 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_11840 78e540d22eea7c76c0d932db982622b9 425 Pfam PF00202 Aminotransferase class-III 25 417 2.6E-126 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ambt_07015 d782851efed62f148900731a707e3fff 468 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 37 282 7.7E-86 T 13-10-2018 IPR008766 Replication gene A protein GO:0006260 ambt_21075 a18f8ab59c8e7d4472a963abdd39f5f5 227 Gene3D G3DSA:2.30.110.10 10 217 2.6E-35 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ambt_21075 a18f8ab59c8e7d4472a963abdd39f5f5 227 SUPERFAMILY SSF50475 36 167 1.23E-22 T 13-10-2018 ambt_21075 a18f8ab59c8e7d4472a963abdd39f5f5 227 Pfam PF01613 Flavin reductase like domain 40 165 2.0E-12 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ambt_06990 25a024f9e9c3665b31289fca91ed6dff 158 Pfam PF05534 HicB family 54 103 4.4E-12 T 13-10-2018 IPR008651 Uncharacterised protein family HicB ambt_06990 25a024f9e9c3665b31289fca91ed6dff 158 SUPERFAMILY SSF143100 1 75 1.07E-7 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like ambt_21190 c8bb98e3efff7167888fdfbca32bdcac 271 SUPERFAMILY SSF53335 30 224 5.4E-15 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_21190 c8bb98e3efff7167888fdfbca32bdcac 271 Gene3D G3DSA:3.40.50.150 26 228 3.6E-20 T 13-10-2018 ambt_21190 c8bb98e3efff7167888fdfbca32bdcac 271 PIRSF PIRSF031679 1 270 1.2E-99 T 13-10-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted ambt_00350 d369ec7f26dcc12279d1570d2b05b34d 389 SMART SM00028 305 338 0.046 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_00350 d369ec7f26dcc12279d1570d2b05b34d 389 SMART SM00028 339 372 5.0E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_00350 d369ec7f26dcc12279d1570d2b05b34d 389 SMART SM00028 203 236 52.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_00350 d369ec7f26dcc12279d1570d2b05b34d 389 SMART SM00028 237 270 0.61 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ambt_00350 d369ec7f26dcc12279d1570d2b05b34d 389 SUPERFAMILY SSF48452 204 372 1.8E-28 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_00350 d369ec7f26dcc12279d1570d2b05b34d 389 Gene3D G3DSA:1.25.40.10 185 387 1.8E-32 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_00350 d369ec7f26dcc12279d1570d2b05b34d 389 Pfam PF14559 Tetratricopeptide repeat 315 382 2.3E-8 T 13-10-2018 ambt_08860 45cb9d21abcb2eee4d1db0dd9a944b4d 358 Pfam PF01594 AI-2E family transporter 20 345 2.1E-67 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like ambt_16430 a900c6783c25fa0aa94215eb883e2379 508 Pfam PF00589 Phage integrase family 237 431 3.5E-7 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_16430 a900c6783c25fa0aa94215eb883e2379 508 SUPERFAMILY SSF56349 234 477 1.85E-11 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_16430 a900c6783c25fa0aa94215eb883e2379 508 Gene3D G3DSA:1.10.443.10 229 479 6.2E-18 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_13680 9dd7c2601d1d599bc734d748e7042c45 287 Pfam PF01148 Cytidylyltransferase family 3 282 8.1E-61 T 13-10-2018 ambt_13680 9dd7c2601d1d599bc734d748e7042c45 287 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 243 269 - T 13-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 ambt_05975 baf7d3cc5506319b2170118f4de90ef0 163 PIRSF PIRSF033239 1 163 9.8E-40 T 13-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD ambt_05975 baf7d3cc5506319b2170118f4de90ef0 163 Pfam PF06055 Exopolysaccharide synthesis, ExoD 14 163 5.8E-35 T 13-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD ambt_06025 23c6767726c2918d469bab309d93a67a 76 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 7.3E-32 T 13-10-2018 IPR021250 Protein of unknown function DUF2789 ambt_06025 23c6767726c2918d469bab309d93a67a 76 Gene3D G3DSA:1.10.10.1130 1 76 2.5E-30 T 13-10-2018 ambt_12315 bac44a4d9298d99057ba03092bedc63c 263 Pfam PF01578 Cytochrome C assembly protein 39 262 2.1E-31 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ambt_20780 55cce38ba193fc6d7601b13e0995247c 164 Pfam PF04002 RadC-like JAB domain 43 162 7.2E-42 T 13-10-2018 IPR025657 RadC-like JAB domain ambt_20780 55cce38ba193fc6d7601b13e0995247c 164 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 113 118 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site ambt_20780 55cce38ba193fc6d7601b13e0995247c 164 TIGRFAM TIGR00608 radc: DNA repair protein RadC 23 164 2.9E-43 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 ambt_20780 55cce38ba193fc6d7601b13e0995247c 164 Gene3D G3DSA:3.40.140.10 41 164 5.3E-40 T 13-10-2018 ambt_10150 c14248e53c3dfd3ff319e0677251c360 518 Pfam PF00563 EAL domain 271 501 2.1E-51 T 13-10-2018 IPR001633 EAL domain ambt_10150 c14248e53c3dfd3ff319e0677251c360 518 SMART SM00052 265 506 5.3E-53 T 13-10-2018 IPR001633 EAL domain ambt_10150 c14248e53c3dfd3ff319e0677251c360 518 SUPERFAMILY SSF141868 270 509 6.15E-61 T 13-10-2018 IPR035919 EAL domain superfamily ambt_10150 c14248e53c3dfd3ff319e0677251c360 518 Gene3D G3DSA:3.20.20.450 263 513 7.1E-65 T 13-10-2018 IPR035919 EAL domain superfamily ambt_10150 c14248e53c3dfd3ff319e0677251c360 518 Pfam PF12792 CSS motif domain associated with EAL 44 165 2.3E-19 T 13-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain ambt_14720 1d16e6ee0df8740b914357cce69134ca 296 SUPERFAMILY SSF53850 59 247 2.28E-12 T 13-10-2018 ambt_14720 1d16e6ee0df8740b914357cce69134ca 296 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 149 247 2.6E-6 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_11375 91b5bf18407678e52dad26d065d226bc 183 Gene3D G3DSA:1.20.1290.10 13 181 4.3E-36 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ambt_11375 91b5bf18407678e52dad26d065d226bc 183 SUPERFAMILY SSF69118 1 182 2.62E-48 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ambt_18970 e89189cca22e1b12ada517e5a687657b 837 SUPERFAMILY SSF53448 557 785 3.64E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18970 e89189cca22e1b12ada517e5a687657b 837 Pfam PF00535 Glycosyl transferase family 2 561 673 9.2E-23 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_18970 e89189cca22e1b12ada517e5a687657b 837 Gene3D G3DSA:3.90.550.10 547 797 6.0E-41 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_01400 a69764f7260b128e4dda535e23785aa1 353 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 352 9.6E-69 T 13-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 ambt_01400 a69764f7260b128e4dda535e23785aa1 353 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 353 2.3E-136 T 13-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 ambt_19875 cfdd5dd07c56f9a0715c8a1b9c502520 459 SMART SM00646 233 392 4.2E-47 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ambt_19875 cfdd5dd07c56f9a0715c8a1b9c502520 459 Pfam PF01476 LysM domain 415 457 1.9E-13 T 13-10-2018 IPR018392 LysM domain ambt_19875 cfdd5dd07c56f9a0715c8a1b9c502520 459 Gene3D G3DSA:3.10.350.10 410 459 2.1E-16 T 13-10-2018 IPR036779 LysM domain superfamily ambt_19875 cfdd5dd07c56f9a0715c8a1b9c502520 459 SUPERFAMILY SSF54106 413 457 1.57E-11 T 13-10-2018 ambt_19875 cfdd5dd07c56f9a0715c8a1b9c502520 459 Pfam PF11741 AMIN domain 28 128 2.6E-20 T 13-10-2018 IPR021731 AMIN domain ambt_19875 cfdd5dd07c56f9a0715c8a1b9c502520 459 Gene3D G3DSA:2.60.40.3500 15 130 2.3E-27 T 13-10-2018 ambt_19875 cfdd5dd07c56f9a0715c8a1b9c502520 459 SUPERFAMILY SSF53187 171 396 2.86E-50 T 13-10-2018 ambt_19875 cfdd5dd07c56f9a0715c8a1b9c502520 459 SMART SM00257 414 457 1.8E-16 T 13-10-2018 IPR018392 LysM domain ambt_19875 cfdd5dd07c56f9a0715c8a1b9c502520 459 Gene3D G3DSA:3.40.630.40 160 400 4.8E-70 T 13-10-2018 ambt_19875 cfdd5dd07c56f9a0715c8a1b9c502520 459 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 173 390 2.2E-45 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ambt_21845 4504842ac1bc94d722a5e40d469ba972 346 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 228 250 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ambt_21845 4504842ac1bc94d722a5e40d469ba972 346 SUPERFAMILY SSF52283 44 163 1.3E-27 T 13-10-2018 ambt_21845 4504842ac1bc94d722a5e40d469ba972 346 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 134 320 7.2E-52 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ambt_21845 4504842ac1bc94d722a5e40d469ba972 346 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 257 273 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ambt_21845 4504842ac1bc94d722a5e40d469ba972 346 Gene3D G3DSA:3.40.50.720 124 319 2.5E-104 T 13-10-2018 ambt_21845 4504842ac1bc94d722a5e40d469ba972 346 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 45 344 4.0E-24 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ambt_21845 4504842ac1bc94d722a5e40d469ba972 346 Gene3D G3DSA:3.40.50.720 48 344 2.5E-104 T 13-10-2018 ambt_21845 4504842ac1bc94d722a5e40d469ba972 346 SUPERFAMILY SSF51735 128 321 1.35E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_08160 355a180ec7855389376622b7610a91e4 268 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 2 263 9.4E-48 T 13-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 ambt_08160 355a180ec7855389376622b7610a91e4 268 Pfam PF05144 Phage replication protein CRI 1 225 5.9E-54 T 13-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 ambt_15685 c8c533f5fa8a526a9c1b8c74f6e5a593 303 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 185 266 9.3E-6 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ambt_15685 c8c533f5fa8a526a9c1b8c74f6e5a593 303 Gene3D G3DSA:2.60.120.620 137 268 7.6E-9 T 13-10-2018 ambt_15685 c8c533f5fa8a526a9c1b8c74f6e5a593 303 SUPERFAMILY SSF51197 97 269 7.51E-11 T 13-10-2018 ambt_18490 fd44ec48870fe3cdddd23675574bfe07 464 Pfam PF04317 YcjX-like family, DUF463 33 458 1.9E-76 T 13-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein ambt_11960 d3022f401f9e58b230d170f92b3da61f 268 Pfam PF00106 short chain dehydrogenase 2 189 2.0E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11960 d3022f401f9e58b230d170f92b3da61f 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.4E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11960 d3022f401f9e58b230d170f92b3da61f 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.4E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11960 d3022f401f9e58b230d170f92b3da61f 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 3.4E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11960 d3022f401f9e58b230d170f92b3da61f 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ambt_11960 d3022f401f9e58b230d170f92b3da61f 268 Gene3D G3DSA:3.40.50.720 1 267 3.4E-50 T 13-10-2018 ambt_11960 d3022f401f9e58b230d170f92b3da61f 268 SUPERFAMILY SSF51735 1 241 1.0E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_11960 d3022f401f9e58b230d170f92b3da61f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.3E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11960 d3022f401f9e58b230d170f92b3da61f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.3E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11960 d3022f401f9e58b230d170f92b3da61f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.3E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_11960 d3022f401f9e58b230d170f92b3da61f 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.3E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_13820 e6b157c7788c1b180cf7e8de8de8e2e0 335 SMART SM01329 5 331 3.0E-180 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ambt_13820 e6b157c7788c1b180cf7e8de8de8e2e0 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 330 1.5E-108 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ambt_13820 e6b157c7788c1b180cf7e8de8de8e2e0 335 SUPERFAMILY SSF53659 3 335 1.8E-125 T 13-10-2018 ambt_13820 e6b157c7788c1b180cf7e8de8de8e2e0 335 Gene3D G3DSA:3.40.718.10 1 335 1.3E-140 T 13-10-2018 ambt_13820 e6b157c7788c1b180cf7e8de8de8e2e0 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 ambt_18415 bbcd3dbcf7021eed36e870ebe49eb027 226 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 106 7.9E-16 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ambt_18415 bbcd3dbcf7021eed36e870ebe49eb027 226 TIGRFAM TIGR01915 npdG: NADPH-dependent F420 reductase 1 221 7.6E-59 T 13-10-2018 IPR010185 NADPH-dependent F420 reductase GO:0006740|GO:0016651|GO:0050661|GO:0055114|GO:0070967 ambt_18415 bbcd3dbcf7021eed36e870ebe49eb027 226 SUPERFAMILY SSF51735 1 208 3.94E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_18415 bbcd3dbcf7021eed36e870ebe49eb027 226 Gene3D G3DSA:3.40.50.720 1 222 1.9E-47 T 13-10-2018 ambt_05450 efb0bd72fdb514b234096572e52d0991 110 SUPERFAMILY SSF46785 9 103 4.47E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_05450 efb0bd72fdb514b234096572e52d0991 110 Pfam PF03551 Transcriptional regulator PadR-like family 18 90 2.9E-26 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal ambt_05450 efb0bd72fdb514b234096572e52d0991 110 Gene3D G3DSA:1.10.10.10 5 109 2.9E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_01025 6386343f8924efe3d432b4d90f650648 1123 Pfam PF05359 Domain of Unknown Function (DUF748) 171 342 3.0E-14 T 13-10-2018 IPR008023 Protein of unknown function DUF748 ambt_01025 6386343f8924efe3d432b4d90f650648 1123 Pfam PF05359 Domain of Unknown Function (DUF748) 703 847 2.2E-32 T 13-10-2018 IPR008023 Protein of unknown function DUF748 ambt_01025 6386343f8924efe3d432b4d90f650648 1123 Pfam PF05359 Domain of Unknown Function (DUF748) 458 626 1.9E-18 T 13-10-2018 IPR008023 Protein of unknown function DUF748 ambt_20785 01ee0b02ab0c35a577df2a095246ae96 157 Pfam PF12101 Protein of unknown function (DUF3577) 15 143 2.3E-42 T 13-10-2018 IPR021960 Protein of unknown function DUF3577 ambt_10715 4a294e17a56c2ba78a436e213c1f73e7 440 Pfam PF00924 Mechanosensitive ion channel 114 313 2.2E-40 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ambt_10715 4a294e17a56c2ba78a436e213c1f73e7 440 SUPERFAMILY SSF50182 156 222 2.19E-15 T 13-10-2018 IPR010920 LSM domain superfamily ambt_10715 4a294e17a56c2ba78a436e213c1f73e7 440 SUPERFAMILY SSF82689 224 323 3.27E-21 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ambt_10715 4a294e17a56c2ba78a436e213c1f73e7 440 Gene3D G3DSA:2.30.30.60 172 221 3.7E-10 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ambt_10715 4a294e17a56c2ba78a436e213c1f73e7 440 Gene3D G3DSA:3.30.70.100 223 316 8.7E-20 T 13-10-2018 ambt_15620 7fa443dce08125c1e78cf2843058f950 114 SUPERFAMILY SSF54593 8 111 2.51E-16 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_15620 7fa443dce08125c1e78cf2843058f950 114 Gene3D G3DSA:3.10.180.10 3 113 2.4E-14 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_10740 4e9823bc1d03065094f73186dca7598d 525 Gene3D G3DSA:1.10.246.130 233 337 3.2E-13 T 13-10-2018 ambt_10740 4e9823bc1d03065094f73186dca7598d 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 246 265 6.3E-18 T 13-10-2018 ambt_10740 4e9823bc1d03065094f73186dca7598d 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 217 233 6.3E-18 T 13-10-2018 ambt_10740 4e9823bc1d03065094f73186dca7598d 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 361 379 6.3E-18 T 13-10-2018 ambt_10740 4e9823bc1d03065094f73186dca7598d 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 29 54 6.3E-18 T 13-10-2018 ambt_10740 4e9823bc1d03065094f73186dca7598d 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 337 355 6.3E-18 T 13-10-2018 ambt_10740 4e9823bc1d03065094f73186dca7598d 525 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 407 6.3E-18 T 13-10-2018 ambt_10740 4e9823bc1d03065094f73186dca7598d 525 Gene3D G3DSA:3.60.20.40 338 522 7.0E-58 T 13-10-2018 ambt_10740 4e9823bc1d03065094f73186dca7598d 525 Pfam PF01019 Gamma-glutamyltranspeptidase 22 518 1.0E-115 T 13-10-2018 ambt_10740 4e9823bc1d03065094f73186dca7598d 525 SUPERFAMILY SSF56235 9 521 2.89E-135 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_14575 4fc9233ba8f0c265d9b56e85b412ab75 322 Gene3D G3DSA:1.20.58.1130 12 209 7.6E-84 T 13-10-2018 ambt_14575 4fc9233ba8f0c265d9b56e85b412ab75 322 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 6 316 2.0E-74 T 13-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 ambt_14575 4fc9233ba8f0c265d9b56e85b412ab75 322 Gene3D G3DSA:1.20.1420.30 39 314 7.6E-84 T 13-10-2018 ambt_14575 4fc9233ba8f0c265d9b56e85b412ab75 322 Pfam PF01699 Sodium/calcium exchanger protein 177 320 2.1E-30 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 ambt_14575 4fc9233ba8f0c265d9b56e85b412ab75 322 Pfam PF01699 Sodium/calcium exchanger protein 9 145 2.8E-27 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 ambt_14620 170b09b90c4b0c508a25f10accb7a7bf 283 Pfam PF03668 P-loop ATPase protein family 4 282 1.7E-106 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 ambt_14620 170b09b90c4b0c508a25f10accb7a7bf 283 SUPERFAMILY SSF52540 2 155 1.82E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_14620 170b09b90c4b0c508a25f10accb7a7bf 283 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 3 283 40.296 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 ambt_14620 170b09b90c4b0c508a25f10accb7a7bf 283 PIRSF PIRSF005052 3 283 1.3E-105 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 ambt_14620 170b09b90c4b0c508a25f10accb7a7bf 283 Gene3D G3DSA:3.40.50.300 1 163 1.2E-8 T 13-10-2018 ambt_18820 27eb5bf2c3ce02893bb9c9033425b6af 175 Gene3D G3DSA:2.40.160.20 37 174 3.1E-36 T 13-10-2018 ambt_18820 27eb5bf2c3ce02893bb9c9033425b6af 175 PIRSF PIRSF029681 1 175 4.7E-43 T 13-10-2018 IPR018550 Lipid A 3-O-deacylase-related ambt_18820 27eb5bf2c3ce02893bb9c9033425b6af 175 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 39 174 2.3E-30 T 13-10-2018 IPR018550 Lipid A 3-O-deacylase-related ambt_01235 f9fa50e4879ba1496d017adf1a3b2029 435 Gene3D G3DSA:3.40.190.10 40 392 9.8E-159 T 13-10-2018 ambt_01235 f9fa50e4879ba1496d017adf1a3b2029 435 Pfam PF01547 Bacterial extracellular solute-binding protein 38 325 1.1E-50 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein ambt_01235 f9fa50e4879ba1496d017adf1a3b2029 435 Gene3D G3DSA:3.40.190.10 136 421 9.8E-159 T 13-10-2018 ambt_01235 f9fa50e4879ba1496d017adf1a3b2029 435 SUPERFAMILY SSF53850 23 407 1.99E-82 T 13-10-2018 ambt_15045 d10a0941ba2ef964c1c8824f37f03b14 173 SUPERFAMILY SSF55811 19 102 3.66E-17 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ambt_15045 d10a0941ba2ef964c1c8824f37f03b14 173 ProSitePatterns PS00893 Nudix box signature. 68 89 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ambt_15045 d10a0941ba2ef964c1c8824f37f03b14 173 Gene3D G3DSA:3.90.79.10 28 139 8.9E-17 T 13-10-2018 ambt_15045 d10a0941ba2ef964c1c8824f37f03b14 173 Pfam PF00293 NUDIX domain 41 102 1.0E-9 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ambt_01180 bffe543a9e63ce1c7a5f64eba6c5a118 239 SMART SM00382 26 216 8.6E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_01180 bffe543a9e63ce1c7a5f64eba6c5a118 239 SUPERFAMILY SSF52540 3 220 1.7E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_01180 bffe543a9e63ce1c7a5f64eba6c5a118 239 Pfam PF00005 ABC transporter 18 160 1.2E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_01180 bffe543a9e63ce1c7a5f64eba6c5a118 239 Gene3D G3DSA:3.40.50.300 1 238 5.6E-56 T 13-10-2018 ambt_06590 eb538e4f1a5e758b73348f7f9487eb22 318 SUPERFAMILY SSF53474 3 316 1.34E-57 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_06590 eb538e4f1a5e758b73348f7f9487eb22 318 PRINTS PR00412 Epoxide hydrolase signature 37 55 1.3E-8 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_06590 eb538e4f1a5e758b73348f7f9487eb22 318 PRINTS PR00412 Epoxide hydrolase signature 117 130 1.3E-8 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_06590 eb538e4f1a5e758b73348f7f9487eb22 318 PRINTS PR00412 Epoxide hydrolase signature 103 116 1.3E-8 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_06590 eb538e4f1a5e758b73348f7f9487eb22 318 PRINTS PR00412 Epoxide hydrolase signature 294 316 1.3E-8 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ambt_06590 eb538e4f1a5e758b73348f7f9487eb22 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 6.6E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_06590 eb538e4f1a5e758b73348f7f9487eb22 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 6.6E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_06590 eb538e4f1a5e758b73348f7f9487eb22 318 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 6.6E-8 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_06590 eb538e4f1a5e758b73348f7f9487eb22 318 Gene3D G3DSA:3.40.50.1820 5 317 5.5E-63 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_06590 eb538e4f1a5e758b73348f7f9487eb22 318 Pfam PF00561 alpha/beta hydrolase fold 31 301 1.1E-24 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_07610 dc5d543e98eb208b78caad7c283cbce7 275 SUPERFAMILY SSF53098 102 265 5.01E-43 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_07610 dc5d543e98eb208b78caad7c283cbce7 275 Pfam PF13276 HTH-like domain 28 84 2.4E-11 T 13-10-2018 IPR025948 HTH-like domain ambt_07610 dc5d543e98eb208b78caad7c283cbce7 275 Pfam PF00665 Integrase core domain 108 222 8.7E-35 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_07610 dc5d543e98eb208b78caad7c283cbce7 275 Gene3D G3DSA:3.30.420.10 106 270 1.0E-15 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_14485 dc5d543e98eb208b78caad7c283cbce7 275 SUPERFAMILY SSF53098 102 265 5.01E-43 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_14485 dc5d543e98eb208b78caad7c283cbce7 275 Pfam PF13276 HTH-like domain 28 84 2.4E-11 T 13-10-2018 IPR025948 HTH-like domain ambt_14485 dc5d543e98eb208b78caad7c283cbce7 275 Pfam PF00665 Integrase core domain 108 222 8.7E-35 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_14485 dc5d543e98eb208b78caad7c283cbce7 275 Gene3D G3DSA:3.30.420.10 106 270 1.0E-15 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_21905 d7e7b28ad8709981bdbdccf94e515ec0 435 SUPERFAMILY SSF51338 45 94 8.93E-13 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_21905 d7e7b28ad8709981bdbdccf94e515ec0 435 SUPERFAMILY SSF51556 85 396 1.02E-108 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_21905 d7e7b28ad8709981bdbdccf94e515ec0 435 Gene3D G3DSA:2.30.40.10 34 430 4.9E-138 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ambt_21905 d7e7b28ad8709981bdbdccf94e515ec0 435 Gene3D G3DSA:3.20.20.140 87 395 4.9E-138 T 13-10-2018 ambt_21905 d7e7b28ad8709981bdbdccf94e515ec0 435 Pfam PF01979 Amidohydrolase family 81 432 5.8E-50 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ambt_15050 adda342748252661ca7d6d06debc99ca 255 Gene3D G3DSA:3.40.225.10 8 255 5.7E-65 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ambt_15050 adda342748252661ca7d6d06debc99ca 255 SUPERFAMILY SSF53639 17 222 2.55E-54 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ambt_15050 adda342748252661ca7d6d06debc99ca 255 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 23 201 3.3E-40 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal ambt_15050 adda342748252661ca7d6d06debc99ca 255 SMART SM01007 22 201 6.5E-52 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal ambt_09530 d45798442246c1efd6cd671e971d8a58 236 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 189 5.2E-36 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ambt_09530 d45798442246c1efd6cd671e971d8a58 236 Pfam PF01467 Cytidylyltransferase-like 6 181 1.0E-23 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ambt_09530 d45798442246c1efd6cd671e971d8a58 236 SUPERFAMILY SSF52374 4 233 2.31E-39 T 13-10-2018 ambt_09530 d45798442246c1efd6cd671e971d8a58 236 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 231 26.146 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ambt_09530 d45798442246c1efd6cd671e971d8a58 236 Gene3D G3DSA:3.40.50.620 4 231 1.2E-54 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_18905 1c365a5963ef17ee04536fac01a53ea0 1248 Gene3D G3DSA:2.120.10.80 202 388 1.5E-9 T 13-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 ambt_18905 1c365a5963ef17ee04536fac01a53ea0 1248 Gene3D G3DSA:2.120.10.80 8 198 1.7E-13 T 13-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 ambt_18905 1c365a5963ef17ee04536fac01a53ea0 1248 SUPERFAMILY SSF117281 95 333 1.05E-24 T 13-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 ambt_18905 1c365a5963ef17ee04536fac01a53ea0 1248 SUPERFAMILY SSF69318 887 1223 1.07E-11 T 13-10-2018 ambt_04610 bb0eaa7df013e687cc4a57f7d5f831fe 452 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 169 9.8E-24 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_04610 bb0eaa7df013e687cc4a57f7d5f831fe 452 Gene3D G3DSA:2.170.130.10 30 173 1.1E-36 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_04610 bb0eaa7df013e687cc4a57f7d5f831fe 452 SUPERFAMILY SSF56935 27 414 3.3E-46 T 13-10-2018 ambt_16255 fba1b207fffec4d33b4f386a05ecf4f0 268 Pfam PF07063 Domain of unknown function (DUF1338) 7 265 2.0E-51 T 13-10-2018 IPR009770 Domain of unknown function DUF1338 ambt_16255 fba1b207fffec4d33b4f386a05ecf4f0 268 Gene3D G3DSA:3.10.180.50 2 243 1.6E-93 T 13-10-2018 ambt_16255 fba1b207fffec4d33b4f386a05ecf4f0 268 SMART SM01150 5 266 5.8E-114 T 13-10-2018 IPR009770 Domain of unknown function DUF1338 ambt_18950 14a99a8db02f07325d8bb3a5b9f80e0c 532 SUPERFAMILY SSF56112 243 435 2.17E-7 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_18950 14a99a8db02f07325d8bb3a5b9f80e0c 532 Gene3D G3DSA:3.90.550.10 4 220 1.7E-9 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18950 14a99a8db02f07325d8bb3a5b9f80e0c 532 SUPERFAMILY SSF53448 22 215 4.07E-7 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_03665 d2b8088390f95e2f889d6bbda5215a27 170 Gene3D G3DSA:2.160.10.10 73 170 9.4E-20 T 13-10-2018 ambt_03665 d2b8088390f95e2f889d6bbda5215a27 170 PIRSF PIRSF000441 3 170 1.0E-44 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ambt_03665 d2b8088390f95e2f889d6bbda5215a27 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 152 2.2E-5 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_03665 d2b8088390f95e2f889d6bbda5215a27 170 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ambt_03665 d2b8088390f95e2f889d6bbda5215a27 170 SUPERFAMILY SSF51161 23 169 6.52E-29 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_21670 3f179c39b6e7463aaba9589429b573c4 127 SUPERFAMILY SSF54593 1 123 3.18E-17 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_21670 3f179c39b6e7463aaba9589429b573c4 127 Gene3D G3DSA:3.10.180.10 1 125 3.4E-29 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_15120 9bd9a2d56848ddeb2fbfdb56c26303c9 200 Pfam PF13023 HD domain 16 179 3.5E-48 T 13-10-2018 IPR006674 HD domain ambt_15120 9bd9a2d56848ddeb2fbfdb56c26303c9 200 Gene3D G3DSA:1.10.3210.10 5 197 3.0E-53 T 13-10-2018 ambt_15120 9bd9a2d56848ddeb2fbfdb56c26303c9 200 SUPERFAMILY SSF109604 6 187 5.34E-42 T 13-10-2018 ambt_03520 1466bc332bf646817a021d168a992885 204 Pfam PF10671 Toxin co-regulated pilus biosynthesis protein Q 115 190 4.0E-15 T 13-10-2018 IPR018927 Toxin co-regulated pilus biosynthesis protein Q, C-terminal ambt_21530 0a1d35579b3cd8b585acf421cd2812bd 258 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 164 249 5.5E-27 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ambt_21530 0a1d35579b3cd8b585acf421cd2812bd 258 Gene3D G3DSA:3.10.50.40 150 254 3.5E-43 T 13-10-2018 ambt_21530 0a1d35579b3cd8b585acf421cd2812bd 258 SUPERFAMILY SSF54534 46 251 1.1E-58 T 13-10-2018 ambt_21530 0a1d35579b3cd8b585acf421cd2812bd 258 Gene3D G3DSA:1.10.287.460 31 149 2.9E-25 T 13-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 ambt_21530 0a1d35579b3cd8b585acf421cd2812bd 258 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 40 155 5.0E-28 T 13-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 ambt_19215 6008256f42d214d17093e23ba12c3025 531 SMART SM00283 268 529 2.6E-39 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_19215 6008256f42d214d17093e23ba12c3025 531 SUPERFAMILY SSF58104 222 530 1.7E-52 T 13-10-2018 ambt_19215 6008256f42d214d17093e23ba12c3025 531 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 484 5.3E-31 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ambt_19215 6008256f42d214d17093e23ba12c3025 531 Gene3D G3DSA:1.10.287.950 199 531 1.6E-51 T 13-10-2018 ambt_20375 8e58c69f770ab97f1d37a27edb40e81f 187 SUPERFAMILY SSF54631 42 166 1.92E-16 T 13-10-2018 ambt_20375 8e58c69f770ab97f1d37a27edb40e81f 187 Pfam PF00571 CBS domain 125 166 3.0E-6 T 13-10-2018 IPR000644 CBS domain ambt_20375 8e58c69f770ab97f1d37a27edb40e81f 187 Pfam PF00571 CBS domain 42 84 3.8E-4 T 13-10-2018 IPR000644 CBS domain ambt_20375 8e58c69f770ab97f1d37a27edb40e81f 187 Gene3D G3DSA:3.10.580.10 22 174 2.0E-18 T 13-10-2018 ambt_00990 70d11d97d458c43e20735620c65180af 122 SUPERFAMILY SSF49879 4 63 1.38E-15 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ambt_00990 70d11d97d458c43e20735620c65180af 122 SMART SM00240 5 58 1.0E-4 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_00990 70d11d97d458c43e20735620c65180af 122 Pfam PF00498 FHA domain 6 53 6.5E-12 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_00990 70d11d97d458c43e20735620c65180af 122 Gene3D G3DSA:2.60.200.20 2 83 1.2E-15 T 13-10-2018 ambt_03610 3ec28ccd33cefeb2a042df54cba0e9e2 308 SUPERFAMILY SSF53448 4 242 3.0E-36 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_03610 3ec28ccd33cefeb2a042df54cba0e9e2 308 Gene3D G3DSA:3.90.550.10 1 219 4.8E-29 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_03610 3ec28ccd33cefeb2a042df54cba0e9e2 308 Pfam PF00535 Glycosyl transferase family 2 6 143 2.9E-17 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_17030 cc5c48a4eeb280f1b518832745a206cf 351 Pfam PF14350 Beta protein 4 347 5.1E-82 T 13-10-2018 IPR025683 Protein beta ambt_07300 1a982a70c40a48ab6099b256e66f8075 246 Gene3D G3DSA:3.40.30.10 14 78 7.6E-11 T 13-10-2018 ambt_07300 1a982a70c40a48ab6099b256e66f8075 246 Pfam PF00462 Glutaredoxin 17 67 1.5E-5 T 13-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ambt_07300 1a982a70c40a48ab6099b256e66f8075 246 SUPERFAMILY SSF52833 7 80 4.48E-13 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_16985 ee28e514df80d53680aa7ab38ecce9aa 273 Pfam PF01936 NYN domain 122 227 1.3E-8 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type ambt_00520 7a2132f3e5c56eec7c3cc4122005da16 171 SUPERFAMILY SSF54593 10 161 2.55E-28 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_00520 7a2132f3e5c56eec7c3cc4122005da16 171 TIGRFAM TIGR03645 glyox_marine: lactoylglutathione lyase family protein 9 170 1.3E-104 T 13-10-2018 IPR019883 Lactoylglutathione lyase ambt_00520 7a2132f3e5c56eec7c3cc4122005da16 171 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 156 6.9E-13 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ambt_00520 7a2132f3e5c56eec7c3cc4122005da16 171 Gene3D G3DSA:3.10.180.10 3 159 4.3E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_17550 fee8b1f603219ee4db08b3cea08b99ff 250 SUPERFAMILY SSF56024 10 135 7.06E-9 T 13-10-2018 ambt_17550 fee8b1f603219ee4db08b3cea08b99ff 250 Pfam PF13091 PLD-like domain 15 131 4.7E-8 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ambt_17550 fee8b1f603219ee4db08b3cea08b99ff 250 Gene3D G3DSA:3.30.870.10 3 142 7.7E-8 T 13-10-2018 ambt_21945 87570b1680e6e555b6b021f2f3ab3362 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 7.1E-118 T 13-10-2018 IPR005229 Conserved hypothetical protein CHP00255 ambt_21945 87570b1680e6e555b6b021f2f3ab3362 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.1E-43 T 13-10-2018 IPR013527 YicC-like, N-terminal ambt_21945 87570b1680e6e555b6b021f2f3ab3362 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 1.8E-34 T 13-10-2018 IPR013551 Domain of unknown function DUF1732 ambt_08130 d57d1adb8ff532f725e4a0f9a75e5d1f 45 PIRSF PIRSF037205 1 45 5.7E-21 T 13-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 ambt_08130 d57d1adb8ff532f725e4a0f9a75e5d1f 45 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 2 39 8.1E-22 T 13-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 ambt_12450 20f28743606be2ba3893e2713a5458df 301 Pfam PF11227 Protein of unknown function (DUF3025) 77 284 1.6E-76 T 13-10-2018 IPR021390 Protein of unknown function DUF3025 ambt_05400 d16b3a87aaa6836ad17ef5d4a8a7f43e 306 SUPERFAMILY SSF52540 140 291 5.32E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_05400 d16b3a87aaa6836ad17ef5d4a8a7f43e 306 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 168 291 5.0E-8 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ambt_05400 d16b3a87aaa6836ad17ef5d4a8a7f43e 306 Gene3D G3DSA:3.40.50.300 200 302 2.8E-5 T 13-10-2018 ambt_11995 22f31476cc4a1618b3697da62d528722 352 SUPERFAMILY SSF103473 20 337 2.35E-62 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_11995 22f31476cc4a1618b3697da62d528722 352 ProSitePatterns PS00942 glpT family of transporters signature. 54 70 - T 13-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 ambt_11995 22f31476cc4a1618b3697da62d528722 352 Pfam PF07690 Major Facilitator Superfamily 23 300 1.3E-36 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_11995 22f31476cc4a1618b3697da62d528722 352 Gene3D G3DSA:1.20.1250.20 9 127 3.3E-27 T 13-10-2018 ambt_11995 22f31476cc4a1618b3697da62d528722 352 Gene3D G3DSA:1.20.1250.20 141 345 5.5E-56 T 13-10-2018 ambt_01110 73748642c6a0d1f7f943e49518846e25 391 Pfam PF10442 FIST C domain 245 375 4.2E-14 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 ambt_01110 73748642c6a0d1f7f943e49518846e25 391 SMART SM01204 245 376 3.3E-27 T 13-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 ambt_01110 73748642c6a0d1f7f943e49518846e25 391 Pfam PF08495 FIST N domain 46 243 6.0E-28 T 13-10-2018 IPR013702 FIST domain, N-terminal ambt_01110 73748642c6a0d1f7f943e49518846e25 391 SMART SM00897 43 244 4.5E-45 T 13-10-2018 IPR013702 FIST domain, N-terminal ambt_16975 72534592b5a6e4414391c160f259dd61 583 SUPERFAMILY SSF56349 288 568 6.77E-21 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_16975 72534592b5a6e4414391c160f259dd61 583 Pfam PF00589 Phage integrase family 413 567 2.2E-11 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ambt_16975 72534592b5a6e4414391c160f259dd61 583 Gene3D G3DSA:1.10.443.10 389 580 2.6E-14 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_10325 ab729d892903deb0850b7424e6f2a058 177 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 29 174 1.7E-13 T 13-10-2018 IPR019587 Polyketide cyclase/dehydrase ambt_10325 ab729d892903deb0850b7424e6f2a058 177 SUPERFAMILY SSF55961 25 175 1.5E-19 T 13-10-2018 ambt_10325 ab729d892903deb0850b7424e6f2a058 177 Gene3D G3DSA:3.30.530.20 27 176 6.5E-13 T 13-10-2018 IPR023393 START-like domain superfamily ambt_02200 58d9cd92853150eb828ab2b54b718f1c 514 Pfam PF01098 Cell cycle protein 47 399 6.8E-110 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_02200 58d9cd92853150eb828ab2b54b718f1c 514 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 46 399 8.5E-128 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_02200 58d9cd92853150eb828ab2b54b718f1c 514 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 42 410 42.014 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_02200 58d9cd92853150eb828ab2b54b718f1c 514 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 358 382 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ambt_15025 61b6028e051952405f8c09ae0f184b7f 385 SUPERFAMILY SSF56935 20 385 3.92E-30 T 13-10-2018 ambt_15025 61b6028e051952405f8c09ae0f184b7f 385 Gene3D G3DSA:2.40.160.10 43 385 2.2E-6 T 13-10-2018 IPR023614 Porin domain superfamily ambt_17310 4a02b3c81a01caedb9f528b38b0b377f 365 Pfam PF07690 Major Facilitator Superfamily 3 314 1.7E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_17310 4a02b3c81a01caedb9f528b38b0b377f 365 SUPERFAMILY SSF103473 2 362 1.83E-21 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_17310 4a02b3c81a01caedb9f528b38b0b377f 365 Gene3D G3DSA:1.20.1250.20 1 362 5.5E-17 T 13-10-2018 ambt_03495 8b45250b8a428bdc78daf5596451fffc 264 Pfam PF17131 Outer membrane lipoprotein-sorting protein 79 262 8.5E-60 T 13-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein ambt_03495 8b45250b8a428bdc78daf5596451fffc 264 Gene3D G3DSA:2.50.20.10 27 262 2.4E-84 T 13-10-2018 ambt_11245 1601a3d6342f69c33914e4d1c9ecf8e9 349 Pfam PF01757 Acyltransferase family 14 303 6.6E-13 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ambt_15360 c14f4716021e2b98c5220dfc97cf8718 288 Pfam PF12048 Protein of unknown function (DUF3530) 42 258 6.7E-15 T 13-10-2018 IPR022529 Protein of unknown function DUF3530 ambt_15500 80e9b675731392c8a34ff459d022ce8c 211 SUPERFAMILY SSF53335 12 206 7.91E-40 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_15500 80e9b675731392c8a34ff459d022ce8c 211 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 208 4.4E-66 T 13-10-2018 ambt_15500 80e9b675731392c8a34ff459d022ce8c 211 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 133 148 - T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 ambt_15500 80e9b675731392c8a34ff459d022ce8c 211 Gene3D G3DSA:3.40.50.150 2 209 6.1E-71 T 13-10-2018 ambt_15500 80e9b675731392c8a34ff459d022ce8c 211 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 209 9.4E-74 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 ambt_15500 80e9b675731392c8a34ff459d022ce8c 211 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 211 36.121 T 13-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 ambt_08650 2bf0a10aa805da4c0c0a5429fed1b640 330 SUPERFAMILY SSF51735 2 322 6.11E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_08650 2bf0a10aa805da4c0c0a5429fed1b640 330 Gene3D G3DSA:3.40.50.720 1 328 5.4E-84 T 13-10-2018 ambt_08650 2bf0a10aa805da4c0c0a5429fed1b640 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 224 1.3E-26 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ambt_17920 4b633b1890aea08d6bb5684db4703d97 106 Pfam PF00355 Rieske [2Fe-2S] domain 9 92 1.0E-17 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ambt_17920 4b633b1890aea08d6bb5684db4703d97 106 SUPERFAMILY SSF50022 12 105 3.8E-25 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_17920 4b633b1890aea08d6bb5684db4703d97 106 Gene3D G3DSA:2.102.10.10 2 105 1.1E-29 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_11320 56c5c8c4b7cfa98c0cf9acb2971e3acd 319 SUPERFAMILY SSF56219 112 313 8.77E-20 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_11320 56c5c8c4b7cfa98c0cf9acb2971e3acd 319 Gene3D G3DSA:3.60.10.10 98 314 3.3E-20 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ambt_11320 56c5c8c4b7cfa98c0cf9acb2971e3acd 319 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 125 306 7.1E-9 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ambt_15495 32267e692a66e5f9c25e477950f0fb95 247 SUPERFAMILY SSF64167 1 246 8.5E-88 T 13-10-2018 ambt_15495 32267e692a66e5f9c25e477950f0fb95 247 Gene3D G3DSA:3.40.1210.10 1 247 4.0E-96 T 13-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ambt_15495 32267e692a66e5f9c25e477950f0fb95 247 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 233 7.4E-68 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ambt_15495 32267e692a66e5f9c25e477950f0fb95 247 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 247 39.476 T 13-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ambt_15495 32267e692a66e5f9c25e477950f0fb95 247 Pfam PF01975 Survival protein SurE 3 182 4.1E-61 T 13-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 ambt_10275 bec5cb5b016df468c60182ab0c2ac4d8 135 SUPERFAMILY SSF46955 10 124 1.1E-26 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily ambt_10275 bec5cb5b016df468c60182ab0c2ac4d8 135 Gene3D G3DSA:1.10.1660.10 1 132 3.3E-28 T 13-10-2018 ambt_10275 bec5cb5b016df468c60182ab0c2ac4d8 135 SMART SM00422 10 77 5.9E-18 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_10275 bec5cb5b016df468c60182ab0c2ac4d8 135 Pfam PF13411 MerR HTH family regulatory protein 11 75 5.9E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ambt_21020 30e72ff320ddb7466f9e631fb9c260d1 176 Pfam PF04186 FxsA cytoplasmic membrane protein 6 113 1.4E-35 T 13-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 ambt_08945 ffb127edc617032630d9b0797d28fccd 327 Pfam PF08003 Protein of unknown function (DUF1698) 13 325 3.3E-148 T 13-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like ambt_08945 ffb127edc617032630d9b0797d28fccd 327 Gene3D G3DSA:3.40.50.150 75 308 8.8E-26 T 13-10-2018 ambt_08945 ffb127edc617032630d9b0797d28fccd 327 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 13 325 3.0E-151 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 ambt_08945 ffb127edc617032630d9b0797d28fccd 327 SUPERFAMILY SSF53335 93 319 3.01E-35 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_08945 ffb127edc617032630d9b0797d28fccd 327 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 17 326 53.808 T 13-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 ambt_05465 f93d2a84a805a19906df502b1f70ec5c 331 SUPERFAMILY SSF53474 2 294 1.04E-21 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_05465 f93d2a84a805a19906df502b1f70ec5c 331 PIRSF PIRSF031982 1 330 5.0E-65 T 13-10-2018 IPR016986 Uncharacterised conserved protein UCP031982, alpha/beta hydrolase, XabL ambt_07105 8bacfff9f12f979c0797578b4d6f9034 108 Pfam PF07119 Protein of unknown function (DUF1375) 7 96 1.1E-23 T 13-10-2018 IPR010780 Protein of unknown function DUF1375 ambt_09285 5b39fba7c615d948a48bde320ac01ab0 225 SUPERFAMILY SSF81452 44 221 7.72E-23 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09285 5b39fba7c615d948a48bde320ac01ab0 225 Gene3D G3DSA:1.20.120.80 45 222 5.9E-23 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_09285 5b39fba7c615d948a48bde320ac01ab0 225 Pfam PF00510 Cytochrome c oxidase subunit III 82 222 2.3E-10 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_08435 1ee0079c814d13cc924341b5e8473f54 127 SUPERFAMILY SSF75169 16 121 1.35E-7 T 13-10-2018 IPR027396 DsrEFH-like ambt_08435 1ee0079c814d13cc924341b5e8473f54 127 Pfam PF04077 DsrH like protein 16 118 3.1E-6 T 13-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 ambt_18430 09f02802649d0e2b9c9e4c406f277e66 182 Gene3D G3DSA:2.180.10.10 1 46 3.7E-9 T 13-10-2018 ambt_18430 09f02802649d0e2b9c9e4c406f277e66 182 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1 46 1.5E-11 T 13-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 ambt_05180 7dc3ad2441e1750fc0460786a34bcd4a 527 PRINTS PR00113 Alkaline phosphatase signature 110 125 1.7E-40 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_05180 7dc3ad2441e1750fc0460786a34bcd4a 527 PRINTS PR00113 Alkaline phosphatase signature 54 74 1.7E-40 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_05180 7dc3ad2441e1750fc0460786a34bcd4a 527 PRINTS PR00113 Alkaline phosphatase signature 157 177 1.7E-40 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_05180 7dc3ad2441e1750fc0460786a34bcd4a 527 PRINTS PR00113 Alkaline phosphatase signature 322 351 1.7E-40 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_05180 7dc3ad2441e1750fc0460786a34bcd4a 527 Gene3D G3DSA:3.40.720.10 24 527 1.3E-173 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ambt_05180 7dc3ad2441e1750fc0460786a34bcd4a 527 Pfam PF00245 Alkaline phosphatase 54 524 1.8E-115 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_05180 7dc3ad2441e1750fc0460786a34bcd4a 527 SUPERFAMILY SSF53649 45 524 8.73E-148 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ambt_05180 7dc3ad2441e1750fc0460786a34bcd4a 527 SMART SM00098 55 525 7.4E-138 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ambt_20510 6ad184249acf7d521a9427b9fda138d4 513 Gene3D G3DSA:3.40.50.1820 50 331 7.4E-18 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_20510 6ad184249acf7d521a9427b9fda138d4 513 SUPERFAMILY SSF53474 42 499 6.03E-80 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_20510 6ad184249acf7d521a9427b9fda138d4 513 Pfam PF00450 Serine carboxypeptidase 72 276 5.7E-14 T 13-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 ambt_04210 5c8bd2920d45af00391762e126a692c8 189 Gene3D G3DSA:3.30.700.10 16 161 3.6E-10 T 13-10-2018 ambt_04210 5c8bd2920d45af00391762e126a692c8 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 5.4E-6 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_04210 5c8bd2920d45af00391762e126a692c8 189 Pfam PF12019 Type II transport protein GspH 51 153 3.0E-13 T 13-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 ambt_04210 5c8bd2920d45af00391762e126a692c8 189 SUPERFAMILY SSF54523 16 103 4.08E-14 T 13-10-2018 ambt_04210 5c8bd2920d45af00391762e126a692c8 189 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 34 1.0E-5 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site ambt_16590 c15a8cdb942ca9766e075368cf9f44dc 224 Pfam PF01965 DJ-1/PfpI family 21 220 6.7E-16 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ambt_16590 c15a8cdb942ca9766e075368cf9f44dc 224 Gene3D G3DSA:3.40.50.880 1 223 3.3E-64 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_16590 c15a8cdb942ca9766e075368cf9f44dc 224 SUPERFAMILY SSF52317 1 222 1.21E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like ambt_14245 cac5c125674e7ddd481c5e4533a0f9fe 532 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 369 528 3.8E-40 T 13-10-2018 IPR000160 GGDEF domain ambt_14245 cac5c125674e7ddd481c5e4533a0f9fe 532 Pfam PF07695 7TM diverse intracellular signalling 152 354 1.3E-14 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 ambt_14245 cac5c125674e7ddd481c5e4533a0f9fe 532 SMART SM00267 357 530 2.4E-44 T 13-10-2018 IPR000160 GGDEF domain ambt_14245 cac5c125674e7ddd481c5e4533a0f9fe 532 Gene3D G3DSA:3.30.70.270 366 530 9.1E-45 T 13-10-2018 ambt_14245 cac5c125674e7ddd481c5e4533a0f9fe 532 Pfam PF00990 Diguanylate cyclase, GGDEF domain 370 524 3.0E-37 T 13-10-2018 IPR000160 GGDEF domain ambt_14245 cac5c125674e7ddd481c5e4533a0f9fe 532 SUPERFAMILY SSF55073 376 525 6.91E-38 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_01200 18e149df52bb0b206ff1da4806bbb270 595 Pfam PF13360 PQQ-like domain 72 234 2.1E-17 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat ambt_01200 18e149df52bb0b206ff1da4806bbb270 595 Pfam PF13360 PQQ-like domain 472 540 5.8E-7 T 13-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat ambt_01200 18e149df52bb0b206ff1da4806bbb270 595 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 25 558 9.7E-233 T 13-10-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 ambt_01200 18e149df52bb0b206ff1da4806bbb270 595 SMART SM00564 183 220 0.0082 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_01200 18e149df52bb0b206ff1da4806bbb270 595 SMART SM00564 89 120 0.0027 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_01200 18e149df52bb0b206ff1da4806bbb270 595 SMART SM00564 266 314 25.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_01200 18e149df52bb0b206ff1da4806bbb270 595 SMART SM00564 137 169 9.2E-5 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_01200 18e149df52bb0b206ff1da4806bbb270 595 SMART SM00564 447 489 0.13 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_01200 18e149df52bb0b206ff1da4806bbb270 595 SMART SM00564 498 530 16.0 T 13-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ambt_01200 18e149df52bb0b206ff1da4806bbb270 595 Gene3D G3DSA:2.140.10.10 26 588 2.8E-207 T 13-10-2018 ambt_01200 18e149df52bb0b206ff1da4806bbb270 595 SUPERFAMILY SSF50998 36 581 1.03E-158 T 13-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ambt_13895 71e416cc5197bf81c06a5e055e01d311 432 Gene3D G3DSA:1.25.40.10 152 289 1.8E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_13895 71e416cc5197bf81c06a5e055e01d311 432 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 6 110 5.3E-13 T 13-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI ambt_13895 71e416cc5197bf81c06a5e055e01d311 432 SUPERFAMILY SSF48452 162 271 1.76E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_13920 9218bb2560db09ba44998a8da627734a 71 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 1.2E-17 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 ambt_13920 9218bb2560db09ba44998a8da627734a 71 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 1.1E-18 T 13-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 ambt_02335 ebfbc2287cd5387e7e1d58e91dc577e3 368 Gene3D G3DSA:3.40.190.10 168 266 1.9E-52 T 13-10-2018 ambt_02335 ebfbc2287cd5387e7e1d58e91dc577e3 368 Gene3D G3DSA:1.10.10.10 1 84 5.7E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_02335 ebfbc2287cd5387e7e1d58e91dc577e3 368 SUPERFAMILY SSF53850 87 293 2.9E-35 T 13-10-2018 ambt_02335 ebfbc2287cd5387e7e1d58e91dc577e3 368 Pfam PF03466 LysR substrate binding domain 93 291 3.6E-20 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_02335 ebfbc2287cd5387e7e1d58e91dc577e3 368 Gene3D G3DSA:3.40.190.10 87 291 1.9E-52 T 13-10-2018 ambt_02335 ebfbc2287cd5387e7e1d58e91dc577e3 368 SUPERFAMILY SSF46785 2 81 2.21E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_02335 ebfbc2287cd5387e7e1d58e91dc577e3 368 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.3E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_06245 d2a296c1d858196a206dcd54365a24c6 384 Pfam PF02371 Transposase IS116/IS110/IS902 family 227 299 4.6E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 ambt_06245 d2a296c1d858196a206dcd54365a24c6 384 Pfam PF01548 Transposase 9 157 5.9E-14 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 ambt_15665 d2a296c1d858196a206dcd54365a24c6 384 Pfam PF02371 Transposase IS116/IS110/IS902 family 227 299 4.6E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 ambt_15665 d2a296c1d858196a206dcd54365a24c6 384 Pfam PF01548 Transposase 9 157 5.9E-14 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 ambt_21925 b089f52e2e19aa974dbd248bc3d4ad5c 270 Pfam PF06724 Domain of Unknown Function (DUF1206) 14 81 9.6E-14 T 13-10-2018 IPR009597 Domain of unknown function DUF1206 ambt_21925 b089f52e2e19aa974dbd248bc3d4ad5c 270 Pfam PF06724 Domain of Unknown Function (DUF1206) 101 173 4.9E-12 T 13-10-2018 IPR009597 Domain of unknown function DUF1206 ambt_21925 b089f52e2e19aa974dbd248bc3d4ad5c 270 Pfam PF06724 Domain of Unknown Function (DUF1206) 199 268 1.5E-19 T 13-10-2018 IPR009597 Domain of unknown function DUF1206 ambt_21430 22cd9cd1486f58936c7038375b635f16 252 Pfam PF01203 Type II secretion system (T2SS), protein N 36 249 4.4E-54 T 13-10-2018 IPR022792 Type II secretion system, protein N ambt_10210 c253f54819b416b5226ed91282e8c33c 312 SMART SM00267 138 306 1.7E-7 T 13-10-2018 IPR000160 GGDEF domain ambt_10210 c253f54819b416b5226ed91282e8c33c 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 287 2.2E-23 T 13-10-2018 IPR000160 GGDEF domain ambt_10210 c253f54819b416b5226ed91282e8c33c 312 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 153 281 1.9E-20 T 13-10-2018 IPR000160 GGDEF domain ambt_10210 c253f54819b416b5226ed91282e8c33c 312 SUPERFAMILY SSF55073 157 283 1.33E-21 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_10210 c253f54819b416b5226ed91282e8c33c 312 Gene3D G3DSA:3.30.70.270 137 311 3.2E-27 T 13-10-2018 ambt_04545 1c9f8568af833e0fe335a0fef6b1228d 178 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 6 174 4.2E-68 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 ambt_04545 1c9f8568af833e0fe335a0fef6b1228d 178 Pfam PF00156 Phosphoribosyl transferase domain 29 142 2.6E-10 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ambt_04545 1c9f8568af833e0fe335a0fef6b1228d 178 SUPERFAMILY SSF53271 6 175 6.53E-50 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like ambt_04545 1c9f8568af833e0fe335a0fef6b1228d 178 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 6 175 36.974 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 ambt_04545 1c9f8568af833e0fe335a0fef6b1228d 178 Gene3D G3DSA:3.40.50.2020 1 178 4.5E-64 T 13-10-2018 ambt_01030 e7320b7fbaab75334f07bcedd2bbea3c 187 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 9 180 1.1E-48 T 13-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE ambt_10165 26ebe8c2a8b5c56ad56912dcedfa52f1 155 SUPERFAMILY SSF53098 4 143 2.4E-59 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_10165 26ebe8c2a8b5c56ad56912dcedfa52f1 155 Pfam PF00075 RNase H 4 142 1.1E-50 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 ambt_10165 26ebe8c2a8b5c56ad56912dcedfa52f1 155 Gene3D G3DSA:3.30.420.10 2 151 3.2E-61 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_10165 26ebe8c2a8b5c56ad56912dcedfa52f1 155 Hamap MF_00042 Ribonuclease H [rnhA]. 3 151 36.271 T 13-10-2018 IPR022892 Ribonuclease HI GO:0004523 ambt_16350 8641344b6307e634372545ce0f7a3f2d 305 PIRSF PIRSF016660 1 305 2.1E-113 T 13-10-2018 IPR008526 Inner membrane protein YedI ambt_16350 8641344b6307e634372545ce0f7a3f2d 305 Pfam PF05661 Protein of unknown function (DUF808) 5 294 1.1E-108 T 13-10-2018 IPR008526 Inner membrane protein YedI ambt_10480 9ceed348526595a0fce652441e1a88f1 417 Pfam PF13582 Metallo-peptidase family M12B Reprolysin-like 126 162 9.1E-6 T 13-10-2018 ambt_10480 9ceed348526595a0fce652441e1a88f1 417 SUPERFAMILY SSF55486 91 172 7.81E-10 T 13-10-2018 ambt_10480 9ceed348526595a0fce652441e1a88f1 417 Gene3D G3DSA:3.40.390.10 48 286 2.4E-11 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 ambt_18445 652fab2e7cb0aeabd1d28433da675400 645 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.747 T 13-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ambt_18445 652fab2e7cb0aeabd1d28433da675400 645 Pfam PF01964 Radical SAM ThiC family 144 592 1.3E-198 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ambt_18445 652fab2e7cb0aeabd1d28433da675400 645 Gene3D G3DSA:3.20.20.540 215 527 1.0E-151 T 13-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ambt_18445 652fab2e7cb0aeabd1d28433da675400 645 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 595 4.6E-219 T 13-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ambt_18445 652fab2e7cb0aeabd1d28433da675400 645 Pfam PF13667 ThiC-associated domain 23 103 8.3E-29 T 13-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ambt_09190 5e23186e0bde06a623197a98b0588e19 197 Gene3D G3DSA:3.40.50.300 4 195 3.6E-53 T 13-10-2018 ambt_09190 5e23186e0bde06a623197a98b0588e19 197 SUPERFAMILY SSF52540 5 191 4.99E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_09190 5e23186e0bde06a623197a98b0588e19 197 Pfam PF13671 AAA domain 6 164 4.9E-10 T 13-10-2018 ambt_03195 92b983c82c21f7129dac13007cddf85c 268 Pfam PF08223 PaaX-like protein C-terminal domain 174 260 1.4E-5 T 13-10-2018 IPR013225 PaaX-like, C-terminal ambt_03195 92b983c82c21f7129dac13007cddf85c 268 Gene3D G3DSA:1.10.10.10 11 74 6.6E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_00640 17285f22ac01b4035b9b4f3b18d65dc1 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 3.9E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_00640 17285f22ac01b4035b9b4f3b18d65dc1 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 3.9E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_00640 17285f22ac01b4035b9b4f3b18d65dc1 269 SUPERFAMILY SSF51735 20 269 1.26E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily ambt_00640 17285f22ac01b4035b9b4f3b18d65dc1 269 Pfam PF00106 short chain dehydrogenase 20 221 2.6E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ambt_00640 17285f22ac01b4035b9b4f3b18d65dc1 269 Gene3D G3DSA:3.40.50.720 2 269 1.0E-36 T 13-10-2018 ambt_16310 3a58bb663d4c9aee15f93d4cee3bb458 360 Gene3D G3DSA:3.30.70.1230 90 296 1.2E-61 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_16310 3a58bb663d4c9aee15f93d4cee3bb458 360 SUPERFAMILY SSF55073 98 284 5.34E-57 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_16310 3a58bb663d4c9aee15f93d4cee3bb458 360 SMART SM00044 44 263 4.8E-18 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ambt_16310 3a58bb663d4c9aee15f93d4cee3bb458 360 Pfam PF00211 Adenylate and Guanylate cyclase catalytic domain 98 280 1.9E-33 T 13-10-2018 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 ambt_14910 fb144a39a0b22e309a3542b01009d769 1357 SUPERFAMILY SSF51126 113 397 2.83E-5 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor ambt_14910 fb144a39a0b22e309a3542b01009d769 1357 SMART SM00710 1197 1220 170.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_14910 fb144a39a0b22e309a3542b01009d769 1357 SMART SM00710 330 353 630.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_14910 fb144a39a0b22e309a3542b01009d769 1357 SMART SM00710 354 378 5200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_14910 fb144a39a0b22e309a3542b01009d769 1357 SMART SM00710 678 700 3200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_14910 fb144a39a0b22e309a3542b01009d769 1357 SMART SM00710 758 781 210.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_14910 fb144a39a0b22e309a3542b01009d769 1357 SMART SM00710 1117 1139 5600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_14910 fb144a39a0b22e309a3542b01009d769 1357 SMART SM00710 250 272 620.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_14910 fb144a39a0b22e309a3542b01009d769 1357 SMART SM00710 1221 1245 1700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat ambt_21885 3d34cf2378fab97d775766599a778fc9 420 Pfam PF04116 Fatty acid hydroxylase superfamily 80 211 2.8E-29 T 13-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 ambt_13525 6c09841d7f87e7d954621a3e46997ae4 240 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 106 238 1.2E-34 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal ambt_13525 6c09841d7f87e7d954621a3e46997ae4 240 Gene3D G3DSA:2.30.30.760 182 240 1.7E-10 T 13-10-2018 ambt_13525 6c09841d7f87e7d954621a3e46997ae4 240 SMART SM00858 118 180 1.5E-8 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ambt_13525 6c09841d7f87e7d954621a3e46997ae4 240 Pfam PF13144 Chaperone for flagella basal body P-ring formation 55 238 4.0E-42 T 13-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal ambt_21310 60a2424db0c344215e099b6a92027a3c 325 SUPERFAMILY SSF53474 21 288 4.95E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_21310 60a2424db0c344215e099b6a92027a3c 325 Gene3D G3DSA:3.40.50.1820 19 297 5.9E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_21310 60a2424db0c344215e099b6a92027a3c 325 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 55 264 5.7E-10 T 13-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 ambt_00080 af252c07f181e1efe55a2315f02851ab 248 Pfam PF05818 Enterobacterial TraT complement resistance protein 34 248 1.1E-63 T 13-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 ambt_00080 af252c07f181e1efe55a2315f02851ab 248 PIRSF PIRSF002859 1 248 1.5E-40 T 13-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 ambt_22015 6cd0dee411f27999dc0ae5f7c71ae11d 580 Pfam PF06048 Domain of unknown function (DUF927) 28 310 4.3E-98 T 13-10-2018 IPR009270 Domain of unknown function DUF927 ambt_22065 3d3e49d418ced5ae5fdf5e018573c59d 97 Gene3D G3DSA:3.30.70.100 1 97 1.3E-19 T 13-10-2018 ambt_22065 3d3e49d418ced5ae5fdf5e018573c59d 97 SUPERFAMILY SSF54909 1 95 1.61E-18 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel ambt_22065 3d3e49d418ced5ae5fdf5e018573c59d 97 Pfam PF07045 Domain of unknown function (DUF1330) 2 95 1.7E-19 T 13-10-2018 IPR010753 Domain of unknown function DUF1330 ambt_19225 51c3436649fc5ab950a8b28932111b6f 318 Gene3D G3DSA:3.40.50.1100 19 311 1.1E-105 T 13-10-2018 ambt_19225 51c3436649fc5ab950a8b28932111b6f 318 TIGRFAM TIGR01139 cysK: cysteine synthase A 16 316 1.1E-106 T 13-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ambt_19225 51c3436649fc5ab950a8b28932111b6f 318 TIGRFAM TIGR01136 cysKM: cysteine synthase 16 316 2.3E-106 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ambt_19225 51c3436649fc5ab950a8b28932111b6f 318 SUPERFAMILY SSF53686 13 316 7.46E-89 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ambt_19225 51c3436649fc5ab950a8b28932111b6f 318 Gene3D G3DSA:3.40.50.1100 56 157 1.1E-105 T 13-10-2018 ambt_19225 51c3436649fc5ab950a8b28932111b6f 318 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 304 1.3E-65 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ambt_19225 51c3436649fc5ab950a8b28932111b6f 318 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 44 62 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ambt_04485 37326d239ee95adb3e095aa282422325 293 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 270 292 0.001 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain ambt_03150 e35f3044a92a7a21a729902deb26c9d9 215 SUPERFAMILY SSF52833 42 215 2.65E-32 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_03150 e35f3044a92a7a21a729902deb26c9d9 215 Pfam PF00578 AhpC/TSA family 46 192 2.3E-29 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ambt_03150 e35f3044a92a7a21a729902deb26c9d9 215 Gene3D G3DSA:3.40.30.10 36 214 9.2E-38 T 13-10-2018 ambt_15555 95cd6744e3bafc32e3fad7f46f8fc2ca 439 Pfam PF00557 Metallopeptidase family M24 166 425 1.4E-44 T 13-10-2018 IPR000994 Peptidase M24 ambt_15555 95cd6744e3bafc32e3fad7f46f8fc2ca 439 Gene3D G3DSA:3.40.350.10 1 157 7.8E-65 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ambt_15555 95cd6744e3bafc32e3fad7f46f8fc2ca 439 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 439 59.143 T 13-10-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 ambt_15555 95cd6744e3bafc32e3fad7f46f8fc2ca 439 SUPERFAMILY SSF55920 161 435 2.75E-57 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like ambt_15555 95cd6744e3bafc32e3fad7f46f8fc2ca 439 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 331 343 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ambt_15555 95cd6744e3bafc32e3fad7f46f8fc2ca 439 Gene3D G3DSA:3.90.230.10 159 438 4.1E-79 T 13-10-2018 ambt_13480 646817bf31fcbc732e210b4cec02344f 214 PRINTS PR01008 Flagellar L-ring protein signature 127 142 4.9E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_13480 646817bf31fcbc732e210b4cec02344f 214 PRINTS PR01008 Flagellar L-ring protein signature 190 204 4.9E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_13480 646817bf31fcbc732e210b4cec02344f 214 PRINTS PR01008 Flagellar L-ring protein signature 153 169 4.9E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_13480 646817bf31fcbc732e210b4cec02344f 214 PRINTS PR01008 Flagellar L-ring protein signature 174 188 4.9E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_13480 646817bf31fcbc732e210b4cec02344f 214 PRINTS PR01008 Flagellar L-ring protein signature 54 66 4.9E-22 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_13480 646817bf31fcbc732e210b4cec02344f 214 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 211 24.674 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_13480 646817bf31fcbc732e210b4cec02344f 214 Pfam PF02107 Flagellar L-ring protein 33 213 4.3E-62 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_08980 8c2a8f456225eec20ec98c46cc5cc015 238 SUPERFAMILY SSF53448 4 230 4.33E-17 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_08980 8c2a8f456225eec20ec98c46cc5cc015 238 Gene3D G3DSA:3.90.550.10 1 236 5.9E-38 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_08980 8c2a8f456225eec20ec98c46cc5cc015 238 Pfam PF12804 MobA-like NTP transferase domain 7 204 2.7E-25 T 13-10-2018 IPR025877 MobA-like NTP transferase ambt_08195 e6dd1cdeae7a424e54d893db349ec001 140 SUPERFAMILY SSF52402 4 139 8.37E-26 T 13-10-2018 ambt_08195 e6dd1cdeae7a424e54d893db349ec001 140 PIRSF PIRSF006276 1 140 2.2E-24 T 13-10-2018 IPR006015 Universal stress protein A ambt_08195 e6dd1cdeae7a424e54d893db349ec001 140 Pfam PF00582 Universal stress protein family 4 139 5.9E-24 T 13-10-2018 IPR006016 UspA ambt_08195 e6dd1cdeae7a424e54d893db349ec001 140 PRINTS PR01438 Universal stress protein signature 117 139 2.1E-13 T 13-10-2018 IPR006015 Universal stress protein A ambt_08195 e6dd1cdeae7a424e54d893db349ec001 140 PRINTS PR01438 Universal stress protein signature 4 22 2.1E-13 T 13-10-2018 IPR006015 Universal stress protein A ambt_08195 e6dd1cdeae7a424e54d893db349ec001 140 PRINTS PR01438 Universal stress protein signature 100 112 2.1E-13 T 13-10-2018 IPR006015 Universal stress protein A ambt_08195 e6dd1cdeae7a424e54d893db349ec001 140 Gene3D G3DSA:3.40.50.620 1 140 4.3E-29 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_12740 7bd40d406d08478c2557071d0d5e3d95 185 SUPERFAMILY SSF47226 5 113 8.24E-17 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_12740 7bd40d406d08478c2557071d0d5e3d95 185 Pfam PF01627 Hpt domain 27 100 8.7E-8 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ambt_12740 7bd40d406d08478c2557071d0d5e3d95 185 Gene3D G3DSA:1.20.120.160 4 113 3.0E-18 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 ambt_01130 83178bade596497884e909d8cbed3f7d 409 Gene3D G3DSA:2.40.160.10 31 409 4.0E-16 T 13-10-2018 IPR023614 Porin domain superfamily ambt_01130 83178bade596497884e909d8cbed3f7d 409 SUPERFAMILY SSF56935 32 381 5.49E-18 T 13-10-2018 ambt_01130 83178bade596497884e909d8cbed3f7d 409 Pfam PF13609 Gram-negative porin 14 377 2.2E-17 T 13-10-2018 ambt_01600 2941ccf125cccdcb9907f0363639202b 439 Pfam PF04966 Carbohydrate-selective porin, OprB family 62 432 5.1E-78 T 13-10-2018 IPR007049 Carbohydrate-selective porin OprB GO:0008643|GO:0015288|GO:0016021 ambt_01600 2941ccf125cccdcb9907f0363639202b 439 Gene3D G3DSA:2.40.160.180 41 433 1.2E-104 T 13-10-2018 IPR038673 Carbohydrate-selective porin OprB superfamily ambt_01540 9d419253e38935c78264792733650a91 268 Pfam PF11449 Putative, 10TM heavy-metal exporter 21 253 2.0E-60 T 13-10-2018 IPR021552 Putative, 10TM heavy-metal exporter ambt_00825 f9c8b7d785a64d8b45c2fba8db0c25fd 199 SUPERFAMILY SSF47473 27 198 3.84E-17 T 13-10-2018 IPR011992 EF-hand domain pair ambt_00825 f9c8b7d785a64d8b45c2fba8db0c25fd 199 ProSitePatterns PS00018 EF-hand calcium-binding domain. 156 168 - T 13-10-2018 IPR018247 EF-Hand 1, calcium-binding site ambt_00825 f9c8b7d785a64d8b45c2fba8db0c25fd 199 Gene3D G3DSA:1.10.238.10 22 89 1.1E-10 T 13-10-2018 ambt_00825 f9c8b7d785a64d8b45c2fba8db0c25fd 199 Gene3D G3DSA:1.10.238.10 137 199 1.1E-7 T 13-10-2018 ambt_00825 f9c8b7d785a64d8b45c2fba8db0c25fd 199 Pfam PF13202 EF hand 152 167 0.0018 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 ambt_00825 f9c8b7d785a64d8b45c2fba8db0c25fd 199 Pfam PF13202 EF hand 34 53 0.0047 T 13-10-2018 IPR002048 EF-hand domain GO:0005509 ambt_02630 d1c03b9a453a551679f96a1fc9f3f643 181 Gene3D G3DSA:2.60.40.1880 44 181 4.5E-16 T 13-10-2018 IPR038696 Invasion protein B superfamily ambt_02630 d1c03b9a453a551679f96a1fc9f3f643 181 Pfam PF06776 Invasion associated locus B (IalB) protein 50 176 1.4E-20 T 13-10-2018 IPR010642 Invasion protein B ambt_10065 6fcfa2da6ccdd1179be8be55492b110e 153 Gene3D G3DSA:3.10.450.50 9 153 3.3E-69 T 13-10-2018 ambt_10065 6fcfa2da6ccdd1179be8be55492b110e 153 SUPERFAMILY SSF54427 1 153 9.97E-74 T 13-10-2018 IPR032710 NTF2-like domain superfamily ambt_10065 6fcfa2da6ccdd1179be8be55492b110e 153 Pfam PF07080 Protein of unknown function (DUF1348) 6 134 3.5E-63 T 13-10-2018 IPR009783 Protein of unknown function DUF1348 ambt_01520 c8cd97d4f03e5d1872fd47d4608a9b53 142 PIRSF PIRSF004638 1 142 8.5E-50 T 13-10-2018 IPR005265 Uncharacterised protein family UPF0093 ambt_01520 c8cd97d4f03e5d1872fd47d4608a9b53 142 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 141 2.6E-48 T 13-10-2018 IPR005265 Uncharacterised protein family UPF0093 ambt_01520 c8cd97d4f03e5d1872fd47d4608a9b53 142 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 2 142 5.5E-42 T 13-10-2018 IPR005265 Uncharacterised protein family UPF0093 ambt_15720 dc4cfb61abc879083bf92618678db169 485 Pfam PF13372 Alginate export 86 468 2.5E-38 T 13-10-2018 IPR025388 Alginate export domain ambt_18635 1b30aa41cc81f30bbd425a0d8fafbbd1 87 Pfam PF04380 Membrane fusogenic activity 1 78 1.8E-28 T 13-10-2018 IPR007475 Membrane fusogenic activity ambt_11950 802fd1a26d8803f3da30efaf7d1d9ed5 186 Pfam PF01292 Prokaryotic cytochrome b561 9 183 2.8E-27 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ambt_11950 802fd1a26d8803f3da30efaf7d1d9ed5 186 SUPERFAMILY SSF81342 4 183 1.02E-30 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ambt_17820 890035f58198a8873138a59eb7d12f6b 171 Pfam PF13546 DDE superfamily endonuclease 56 164 1.5E-17 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain ambt_12820 559b71653139a79b35dba879260f5453 142 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 13 49 2.3E-7 T 13-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system ambt_05540 5a2717805903e3e44b8193ae56315c02 155 Pfam PF05981 CreA protein 22 144 4.8E-44 T 13-10-2018 IPR010292 Uncharacterised protein family CreA ambt_05540 5a2717805903e3e44b8193ae56315c02 155 PIRSF PIRSF003174 1 154 1.0E-49 T 13-10-2018 IPR010292 Uncharacterised protein family CreA ambt_19820 9ab495fcf891d3a9fa5d7ff06d365c10 476 Gene3D G3DSA:3.40.309.10 253 441 2.5E-154 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ambt_19820 9ab495fcf891d3a9fa5d7ff06d365c10 476 SUPERFAMILY SSF53720 16 474 1.31E-134 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ambt_19820 9ab495fcf891d3a9fa5d7ff06d365c10 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ambt_19820 9ab495fcf891d3a9fa5d7ff06d365c10 476 Pfam PF00171 Aldehyde dehydrogenase family 20 469 4.6E-141 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ambt_19820 9ab495fcf891d3a9fa5d7ff06d365c10 476 Gene3D G3DSA:3.40.605.10 27 462 2.5E-154 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ambt_07070 1b2646906e7f45ea5c8a071ce18f7c9f 288 Pfam PF00430 ATP synthase B/B' CF(0) 7 134 1.1E-16 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ambt_07070 1b2646906e7f45ea5c8a071ce18f7c9f 288 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 139 10.815 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ambt_07070 1b2646906e7f45ea5c8a071ce18f7c9f 288 TIGRFAM TIGR03321 alt_F1F0_F0_B: alternate F1F0 ATPase, F0 subunit B 1 260 1.3E-74 T 13-10-2018 IPR017707 Alternate ATP synthase, F0 complex, subunit b ambt_21155 8e8e14b9ec04f856b04f77695bac2e4c 339 SUPERFAMILY SSF53098 68 206 6.32E-7 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_21155 8e8e14b9ec04f856b04f77695bac2e4c 339 Pfam PF00665 Integrase core domain 43 173 1.4E-17 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_18015 54607f4b095dc07bfe35fd0943b3a130 104 Gene3D G3DSA:2.102.10.10 1 104 9.4E-32 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_18015 54607f4b095dc07bfe35fd0943b3a130 104 Pfam PF00355 Rieske [2Fe-2S] domain 4 90 2.3E-19 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ambt_18015 54607f4b095dc07bfe35fd0943b3a130 104 SUPERFAMILY SSF50022 3 103 1.96E-29 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ambt_16830 18fa4ef6b2faac3da6305df776da7798 230 SUPERFAMILY SSF143081 26 219 1.03E-19 T 13-10-2018 IPR036590 SOS response associated peptidase-like ambt_16830 18fa4ef6b2faac3da6305df776da7798 230 Pfam PF02586 SOS response associated peptidase (SRAP) 72 210 1.2E-10 T 13-10-2018 IPR003738 SOS response associated peptidase (SRAP) ambt_16830 18fa4ef6b2faac3da6305df776da7798 230 Gene3D G3DSA:3.90.1680.10 25 225 2.8E-12 T 13-10-2018 IPR036590 SOS response associated peptidase-like ambt_12140 a5053b05294278215323e383a3a03a70 315 SUPERFAMILY SSF117396 19 291 3.14E-65 T 13-10-2018 IPR036520 UPF0759 superfamily ambt_12140 a5053b05294278215323e383a3a03a70 315 Pfam PF01904 Protein of unknown function DUF72 43 289 1.8E-58 T 13-10-2018 IPR002763 Protein of unknown function DUF72 ambt_12140 a5053b05294278215323e383a3a03a70 315 Gene3D G3DSA:3.20.20.410 11 305 2.5E-41 T 13-10-2018 IPR036520 UPF0759 superfamily ambt_04115 c2a965f543fef769d18dd19af6b03b00 358 Gene3D G3DSA:3.90.1200.10 124 352 2.4E-63 T 13-10-2018 ambt_04115 c2a965f543fef769d18dd19af6b03b00 358 Gene3D G3DSA:3.30.200.20 17 118 1.2E-27 T 13-10-2018 ambt_04115 c2a965f543fef769d18dd19af6b03b00 358 Pfam PF01636 Phosphotransferase enzyme family 39 272 1.6E-39 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase ambt_04115 c2a965f543fef769d18dd19af6b03b00 358 SUPERFAMILY SSF56112 18 345 3.79E-55 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_15395 37972106a061a9b073048308b9ed1085 267 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 265 1.2E-85 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ambt_15395 37972106a061a9b073048308b9ed1085 267 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 11 261 20.176 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ambt_15395 37972106a061a9b073048308b9ed1085 267 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ambt_15395 37972106a061a9b073048308b9ed1085 267 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 14 255 2.1E-81 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ambt_14155 5db99ea785b3912f8fbf2ada0a0f77b2 155 SUPERFAMILY SSF47060 60 129 2.94E-5 T 13-10-2018 IPR009068 S15/NS1, RNA-binding ambt_14155 5db99ea785b3912f8fbf2ada0a0f77b2 155 Pfam PF03050 Transposase IS66 family 30 112 7.1E-6 T 13-10-2018 IPR004291 Transposase, IS66 ambt_02785 84392bfb9a4548f977155d496ce1530f 98 Gene3D G3DSA:1.10.1660.10 2 98 1.5E-23 T 13-10-2018 ambt_02785 84392bfb9a4548f977155d496ce1530f 98 Pfam PF13591 MerR HTH family regulatory protein 8 93 1.9E-20 T 13-10-2018 ambt_10035 b13c345dc3af59ce908405716e60de08 332 SUPERFAMILY SSF56112 8 305 1.6E-22 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_10035 b13c345dc3af59ce908405716e60de08 332 Pfam PF02958 Ecdysteroid kinase 199 275 1.7E-8 T 13-10-2018 IPR004119 Protein of unknown function DUF227 ambt_10035 b13c345dc3af59ce908405716e60de08 332 Pfam PF02958 Ecdysteroid kinase 72 154 2.0E-4 T 13-10-2018 IPR004119 Protein of unknown function DUF227 ambt_14560 1756238406dba17b5cedb066e7bd8687 157 Pfam PF02470 MlaD protein 38 117 3.7E-19 T 13-10-2018 IPR003399 Mce/MlaD ambt_14560 1756238406dba17b5cedb066e7bd8687 157 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 151 9.2E-53 T 13-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 ambt_03685 7b72bafe601cea0b59a86353adb3ea0b 274 SUPERFAMILY SSF55729 42 246 1.01E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_03685 7b72bafe601cea0b59a86353adb3ea0b 274 Pfam PF13444 Acetyltransferase (GNAT) domain 61 161 6.5E-15 T 13-10-2018 ambt_03685 7b72bafe601cea0b59a86353adb3ea0b 274 TIGRFAM TIGR03694 exosort_acyl: N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated 38 269 5.3E-72 T 13-10-2018 IPR022484 PEP-CTERM/exosortase system-associated acyltransferase, predicted ambt_03685 7b72bafe601cea0b59a86353adb3ea0b 274 Gene3D G3DSA:3.40.630.30 47 254 5.9E-47 T 13-10-2018 ambt_08760 add238050574e3f31f0337b8c87f5734 443 Gene3D G3DSA:3.40.50.620 150 376 3.4E-26 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_08760 add238050574e3f31f0337b8c87f5734 443 SUPERFAMILY SSF52402 152 370 5.02E-6 T 13-10-2018 ambt_04915 aef3ddad8607ef23e63b7729a92a0d89 250 Pfam PF12261 Thermostable hemolysin 35 205 1.6E-52 T 13-10-2018 IPR022050 Thermostable hemolysin ambt_21490 945647e372caac9454569f98bb38d38c 80 SUPERFAMILY SSF118001 1 72 3.14E-25 T 13-10-2018 IPR036685 YehU-like superfamily ambt_21490 945647e372caac9454569f98bb38d38c 80 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 8.1E-30 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 ambt_21490 945647e372caac9454569f98bb38d38c 80 PIRSF PIRSF006169 1 76 1.4E-29 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 ambt_21490 945647e372caac9454569f98bb38d38c 80 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 66 2.0E-18 T 13-10-2018 IPR010648 Uncharacterised protein family UPF0270 ambt_21490 945647e372caac9454569f98bb38d38c 80 Gene3D G3DSA:1.10.10.610 1 75 4.6E-24 T 13-10-2018 IPR036685 YehU-like superfamily ambt_10655 0cca1263a1d96ed18371f2ad120ffe1d 242 SUPERFAMILY SSF89550 2 215 1.1E-10 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ambt_10655 0cca1263a1d96ed18371f2ad120ffe1d 242 Gene3D G3DSA:3.20.20.140 1 241 2.5E-71 T 13-10-2018 ambt_10655 0cca1263a1d96ed18371f2ad120ffe1d 242 PIRSF PIRSF016557 1 241 1.3E-58 T 13-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 ambt_20665 7d241194d14c0c5508974e547df0cff6 392 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 45 359 9.6E-133 T 13-10-2018 IPR017778 ABC transporter, urea, permease protein, UrtC ambt_20665 7d241194d14c0c5508974e547df0cff6 392 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 348 4.6E-41 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ambt_01570 10aff23256673df900d8a829bb458d5e 277 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 28 247 1.1E-83 T 13-10-2018 IPR022488 Polyphosphate kinase-2-related ambt_01570 10aff23256673df900d8a829bb458d5e 277 SUPERFAMILY SSF52540 58 248 2.91E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_01570 10aff23256673df900d8a829bb458d5e 277 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 19 248 2.4E-75 T 13-10-2018 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 KEGG: 00190+2.7.4.1 ambt_01570 10aff23256673df900d8a829bb458d5e 277 PIRSF PIRSF028756 4 274 2.4E-80 T 13-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 ambt_01570 10aff23256673df900d8a829bb458d5e 277 Gene3D G3DSA:3.40.50.300 6 267 3.8E-97 T 13-10-2018 ambt_05735 3816788d6db238cb48b9aa6e4a5fd584 300 SUPERFAMILY SSF53448 4 249 6.84E-24 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_05735 3816788d6db238cb48b9aa6e4a5fd584 300 Gene3D G3DSA:3.90.550.10 1 212 1.6E-21 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_05735 3816788d6db238cb48b9aa6e4a5fd584 300 Pfam PF10111 Glycosyltransferase like family 2 55 198 8.5E-11 T 13-10-2018 IPR019290 Glycosyltransferase 2-like, prokaryotic type ambt_18650 42d56621af5cba8657685971b471c45e 137 Pfam PF03748 Flagellar basal body-associated protein FliL 33 136 2.8E-16 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 ambt_00025 5b9a5f554e892e69a21062f6f3cee649 148 SUPERFAMILY SSF81296 37 89 7.28E-5 T 13-10-2018 IPR014756 Immunoglobulin E-set ambt_07270 62aeabc726776474c6c76da86c19be0d 118 Pfam PF13473 Cupredoxin-like domain 12 117 2.7E-26 T 13-10-2018 IPR028096 EfeO-type cupredoxin-like domain ambt_07270 62aeabc726776474c6c76da86c19be0d 118 SUPERFAMILY SSF49503 16 118 1.41E-12 T 13-10-2018 IPR008972 Cupredoxin ambt_07270 62aeabc726776474c6c76da86c19be0d 118 Gene3D G3DSA:2.60.40.420 24 118 9.2E-22 T 13-10-2018 IPR008972 Cupredoxin ambt_17620 fedceb3533aafb9cc5bb31e81a22abfe 465 SUPERFAMILY SSF53098 52 382 5.76E-29 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_17620 fedceb3533aafb9cc5bb31e81a22abfe 465 Pfam PF13546 DDE superfamily endonuclease 15 261 5.8E-51 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain ambt_00515 5e312b1e14d2deef0a7eb1fe60dc3d80 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 9.3E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_00515 5e312b1e14d2deef0a7eb1fe60dc3d80 315 SUPERFAMILY SSF46785 1 107 8.16E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_00515 5e312b1e14d2deef0a7eb1fe60dc3d80 315 Gene3D G3DSA:3.40.190.10 85 181 4.5E-9 T 13-10-2018 ambt_00515 5e312b1e14d2deef0a7eb1fe60dc3d80 315 SUPERFAMILY SSF53850 87 311 4.34E-16 T 13-10-2018 ambt_00515 5e312b1e14d2deef0a7eb1fe60dc3d80 315 Pfam PF03466 LysR substrate binding domain 90 310 4.0E-14 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_00515 5e312b1e14d2deef0a7eb1fe60dc3d80 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_00515 5e312b1e14d2deef0a7eb1fe60dc3d80 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_00515 5e312b1e14d2deef0a7eb1fe60dc3d80 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.1E-5 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_00515 5e312b1e14d2deef0a7eb1fe60dc3d80 315 Gene3D G3DSA:1.10.10.10 2 84 2.9E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_10865 4c6f8597f78da7cefd108665e4a50d18 405 SUPERFAMILY SSF46626 287 399 1.14E-5 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_10865 4c6f8597f78da7cefd108665e4a50d18 405 Pfam PF06181 Urate oxidase N-terminal 4 296 3.7E-135 T 13-10-2018 IPR010389 Urate oxidase N-terminal ambt_00700 398e6b0246af8770e8bd5fe882615b7c 178 Gene3D G3DSA:1.20.5.1230 16 177 1.0E-5 T 13-10-2018 ambt_09050 153109057f6fced5b49a38ad65bad6ae 845 Pfam PF00326 Prolyl oligopeptidase family 650 845 1.8E-41 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ambt_09050 153109057f6fced5b49a38ad65bad6ae 845 Gene3D G3DSA:2.140.10.30 301 583 2.5E-22 T 13-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily ambt_09050 153109057f6fced5b49a38ad65bad6ae 845 Gene3D G3DSA:3.40.50.1820 591 845 8.0E-62 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_09050 153109057f6fced5b49a38ad65bad6ae 845 SUPERFAMILY SSF53474 600 845 6.61E-59 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_09050 153109057f6fced5b49a38ad65bad6ae 845 SUPERFAMILY SSF82171 86 577 7.59E-32 T 13-10-2018 ambt_09050 153109057f6fced5b49a38ad65bad6ae 845 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 397 558 8.7E-19 T 13-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ambt_10340 ac61d4fff0463c043251198896deaaa5 267 Gene3D G3DSA:3.40.50.1820 2 265 5.3E-43 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_10340 ac61d4fff0463c043251198896deaaa5 267 Pfam PF12697 Alpha/beta hydrolase family 10 256 7.7E-17 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_10340 ac61d4fff0463c043251198896deaaa5 267 SUPERFAMILY SSF53474 10 260 7.77E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_04890 9e2e5e87808951164c2eaf372c16d9e2 476 Pfam PF05598 Transposase domain (DUF772) 56 124 1.8E-17 T 13-10-2018 IPR008490 Transposase InsH, N-terminal ambt_04890 9e2e5e87808951164c2eaf372c16d9e2 476 SUPERFAMILY SSF53098 277 462 9.86E-5 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_04890 9e2e5e87808951164c2eaf372c16d9e2 476 Pfam PF13751 Transposase DDE domain 345 461 3.6E-17 T 13-10-2018 IPR025668 Transposase DDE domain ambt_07280 3c1bcee0c0a03978911773ba54fd8324 217 Gene3D G3DSA:1.20.120.1630 7 208 1.4E-24 T 13-10-2018 ambt_07280 3c1bcee0c0a03978911773ba54fd8324 217 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 100 185 8.2E-8 T 13-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 ambt_20515 86a51df9e4797762fc73c1a97144be86 226 Gene3D G3DSA:3.40.50.150 56 224 8.4E-25 T 13-10-2018 ambt_20515 86a51df9e4797762fc73c1a97144be86 226 SUPERFAMILY SSF53335 62 206 1.55E-25 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_20515 86a51df9e4797762fc73c1a97144be86 226 Pfam PF01564 Spermine/spermidine synthase domain 63 181 9.1E-7 T 13-10-2018 ambt_21630 3402e67b25db04bc2c509bff707256b8 382 Pfam PF12118 SprA-related family 50 239 2.7E-42 T 13-10-2018 IPR021973 SprA-related family ambt_07990 6c75023a0c354171f9378f13923a9832 287 SUPERFAMILY SSF54637 4 112 4.27E-41 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_07990 6c75023a0c354171f9378f13923a9832 287 SUPERFAMILY SSF54637 117 282 5.78E-53 T 13-10-2018 IPR029069 HotDog domain superfamily ambt_07990 6c75023a0c354171f9378f13923a9832 287 Gene3D G3DSA:3.10.129.90 3 284 6.7E-101 T 13-10-2018 ambt_07990 6c75023a0c354171f9378f13923a9832 287 Pfam PF13622 Thioesterase-like superfamily 24 281 8.1E-64 T 13-10-2018 ambt_04895 0103ce4e702cced763e5d93861dc9967 234 SUPERFAMILY SSF48452 81 202 8.85E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_04895 0103ce4e702cced763e5d93861dc9967 234 Gene3D G3DSA:1.25.40.10 24 232 2.6E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_18870 37865e153aada3b417189737ace1cb71 575 Pfam PF00535 Glycosyl transferase family 2 294 469 6.9E-20 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_18870 37865e153aada3b417189737ace1cb71 575 Gene3D G3DSA:3.90.550.10 270 518 2.9E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18870 37865e153aada3b417189737ace1cb71 575 SUPERFAMILY SSF53448 289 544 3.0E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_13040 31fb687d40dc5430c691be677e125c34 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 335 4.8E-44 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ambt_13040 31fb687d40dc5430c691be677e125c34 343 SUPERFAMILY SSF161098 92 320 5.49E-23 T 13-10-2018 IPR035906 MetI-like superfamily ambt_17360 392cf3c6d8e50b7c29d4c61e04bd1e9f 520 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 39 437 5.2E-107 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_17360 392cf3c6d8e50b7c29d4c61e04bd1e9f 520 Pfam PF00474 Sodium:solute symporter family 39 438 4.6E-69 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ambt_17360 392cf3c6d8e50b7c29d4c61e04bd1e9f 520 Gene3D G3DSA:1.20.1730.10 28 520 1.1E-165 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily ambt_05580 848a67fb646d6313fd310ef4ad1de977 167 Gene3D G3DSA:3.40.30.10 49 166 2.5E-8 T 13-10-2018 ambt_05580 848a67fb646d6313fd310ef4ad1de977 167 SUPERFAMILY SSF52833 51 161 3.2E-10 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_09055 82fc86dba72336fc85dd00a22e435d6e 202 Pfam PF02525 Flavodoxin-like fold 3 193 3.7E-43 T 13-10-2018 IPR003680 Flavodoxin-like fold ambt_09055 82fc86dba72336fc85dd00a22e435d6e 202 Gene3D G3DSA:3.40.50.360 1 198 2.3E-56 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_09055 82fc86dba72336fc85dd00a22e435d6e 202 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 197 29.125 T 13-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 ambt_09055 82fc86dba72336fc85dd00a22e435d6e 202 SUPERFAMILY SSF52218 1 197 2.48E-52 T 13-10-2018 IPR029039 Flavoprotein-like superfamily ambt_12720 3192fb3b0bba14359ddd548fe03fd3f8 207 SUPERFAMILY SSF143422 29 86 1.53E-9 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 ambt_12720 3192fb3b0bba14359ddd548fe03fd3f8 207 Gene3D G3DSA:3.30.70.1290 15 117 1.9E-13 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 ambt_20075 ae04aa7f72861d1462110d9bbba063a3 117 SUPERFAMILY SSF46626 38 106 1.67E-9 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_20075 ae04aa7f72861d1462110d9bbba063a3 117 Gene3D G3DSA:1.10.760.10 37 96 7.1E-8 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_05430 2a96883cfff28672368dba2763b9cf82 505 Pfam PF00665 Integrase core domain 130 261 2.2E-15 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_05430 2a96883cfff28672368dba2763b9cf82 505 SUPERFAMILY SSF53098 137 295 6.07E-7 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_06060 635e5290ce4891ea0415421f9c98ff6c 1365 Gene3D G3DSA:1.10.486.10 674 816 3.2E-97 T 13-10-2018 ambt_06060 635e5290ce4891ea0415421f9c98ff6c 1365 Pfam PF00580 UvrD/REP helicase N-terminal domain 21 499 1.1E-51 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ambt_06060 635e5290ce4891ea0415421f9c98ff6c 1365 Gene3D G3DSA:3.40.50.300 16 498 8.9E-94 T 13-10-2018 ambt_06060 635e5290ce4891ea0415421f9c98ff6c 1365 Gene3D G3DSA:1.10.3170.10 189 389 8.9E-94 T 13-10-2018 ambt_06060 635e5290ce4891ea0415421f9c98ff6c 1365 Pfam PF13361 UvrD-like helicase C-terminal domain 611 911 1.6E-17 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ambt_06060 635e5290ce4891ea0415421f9c98ff6c 1365 SUPERFAMILY SSF52980 988 1311 2.84E-64 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ambt_06060 635e5290ce4891ea0415421f9c98ff6c 1365 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 14 1310 19.675 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 ambt_06060 635e5290ce4891ea0415421f9c98ff6c 1365 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 17 1309 1.3E-227 T 13-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 ambt_06060 635e5290ce4891ea0415421f9c98ff6c 1365 Gene3D G3DSA:3.90.320.10 981 1315 5.5E-78 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal ambt_06060 635e5290ce4891ea0415421f9c98ff6c 1365 SUPERFAMILY SSF52540 11 915 3.74E-92 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_06060 635e5290ce4891ea0415421f9c98ff6c 1365 Gene3D G3DSA:3.40.50.300 507 921 3.2E-97 T 13-10-2018 ambt_02895 a41b4953e0d4ec3b4a7ece8ebfe25f0a 130 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 33 129 8.1E-33 T 13-10-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 ambt_02895 a41b4953e0d4ec3b4a7ece8ebfe25f0a 130 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 40 114 1.7E-14 T 13-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 ambt_03940 3e8361b2a3fa194ca0eb4d7bd9a2086a 177 Gene3D G3DSA:3.30.300.130 72 176 4.6E-33 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ambt_03940 3e8361b2a3fa194ca0eb4d7bd9a2086a 177 Pfam PF01883 Iron-sulfur cluster assembly protein 79 153 7.3E-18 T 13-10-2018 IPR002744 MIP18 family-like ambt_03940 3e8361b2a3fa194ca0eb4d7bd9a2086a 177 SUPERFAMILY SSF117916 77 173 4.25E-29 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ambt_03940 3e8361b2a3fa194ca0eb4d7bd9a2086a 177 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 6 175 1.3E-76 T 13-10-2018 IPR017776 FeS assembly SUF system protein SufT, putative ambt_04095 aa5a0a7ab58a3201266ead05c981525e 266 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 9 221 3.0E-10 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 ambt_04095 aa5a0a7ab58a3201266ead05c981525e 266 Gene3D G3DSA:3.60.21.10 6 248 9.1E-20 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like ambt_04095 aa5a0a7ab58a3201266ead05c981525e 266 SUPERFAMILY SSF56300 5 226 2.92E-28 T 13-10-2018 ambt_14270 898bf3842949ec41d5dbc0b59fb9793f 178 Pfam PF08534 Redoxin 8 148 5.3E-20 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ambt_14270 898bf3842949ec41d5dbc0b59fb9793f 178 SUPERFAMILY SSF52833 6 175 1.87E-30 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_14270 898bf3842949ec41d5dbc0b59fb9793f 178 Gene3D G3DSA:3.40.30.10 1 162 9.3E-24 T 13-10-2018 ambt_19105 316bab27f7b7fd3ce82b59a9ed7b2d1f 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.2E-27 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19105 316bab27f7b7fd3ce82b59a9ed7b2d1f 101 Gene3D G3DSA:4.10.830.10 41 101 8.1E-24 T 13-10-2018 ambt_19105 316bab27f7b7fd3ce82b59a9ed7b2d1f 101 SUPERFAMILY SSF57716 2 101 2.28E-39 T 13-10-2018 ambt_19105 316bab27f7b7fd3ce82b59a9ed7b2d1f 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 13-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_19105 316bab27f7b7fd3ce82b59a9ed7b2d1f 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.244 T 13-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid ambt_21500 06b17ac3afe5a621c5c2dc5fead3b4be 175 Pfam PF09523 Protein of unknown function (DUF2390) 12 119 5.3E-23 T 13-10-2018 IPR012659 Conserved hypothetical protein CHP02444 ambt_21500 06b17ac3afe5a621c5c2dc5fead3b4be 175 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 11 123 5.1E-16 T 13-10-2018 IPR012659 Conserved hypothetical protein CHP02444 ambt_20140 fb2d44b4d539c08e2933c2252b7eca45 997 SUPERFAMILY SSF49478 702 754 1.69E-6 T 13-10-2018 ambt_20140 fb2d44b4d539c08e2933c2252b7eca45 997 Gene3D G3DSA:2.60.40.10 692 812 3.5E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_03650 dfa9e0bbf3c61405b837551fdac40a77 327 Pfam PF01522 Polysaccharide deacetylase 86 284 1.3E-27 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ambt_03650 dfa9e0bbf3c61405b837551fdac40a77 327 SUPERFAMILY SSF88713 48 284 1.64E-33 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ambt_19860 ab22b65deb8687445f76070fc79d3e73 83 Pfam PF17209 Hfq protein 7 68 2.4E-31 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ambt_19860 ab22b65deb8687445f76070fc79d3e73 83 Gene3D G3DSA:2.30.30.100 1 82 6.4E-34 T 13-10-2018 ambt_19860 ab22b65deb8687445f76070fc79d3e73 83 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 3.6E-30 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ambt_19860 ab22b65deb8687445f76070fc79d3e73 83 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.752 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ambt_19860 ab22b65deb8687445f76070fc79d3e73 83 SUPERFAMILY SSF50182 7 69 1.92E-24 T 13-10-2018 IPR010920 LSM domain superfamily ambt_03030 87fe3b9441053d72db9ec45515f79749 493 Gene3D G3DSA:3.90.400.10 90 175 6.0E-129 T 13-10-2018 ambt_03030 87fe3b9441053d72db9ec45515f79749 493 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 5 475 7.9E-126 T 13-10-2018 IPR022527 Sucrose phosphorylase GO:0004645|GO:0044262 ambt_03030 87fe3b9441053d72db9ec45515f79749 493 Gene3D G3DSA:3.20.20.80 9 417 6.0E-129 T 13-10-2018 ambt_03030 87fe3b9441053d72db9ec45515f79749 493 SMART SM00642 8 429 2.9E-6 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_03030 87fe3b9441053d72db9ec45515f79749 493 Pfam PF00128 Alpha amylase, catalytic domain 32 221 3.2E-10 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ambt_03030 87fe3b9441053d72db9ec45515f79749 493 SUPERFAMILY SSF51445 4 434 3.43E-77 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily ambt_03030 87fe3b9441053d72db9ec45515f79749 493 PIRSF PIRSF003059 1 486 2.7E-152 T 13-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related ambt_02725 54de38fad8d7ac0cf66427a34b4cbad2 165 Pfam PF01863 Protein of unknown function DUF45 93 151 4.6E-12 T 13-10-2018 IPR002725 Protein of unknown function DUF45 ambt_02725 54de38fad8d7ac0cf66427a34b4cbad2 165 Gene3D G3DSA:3.30.2010.10 79 156 7.3E-8 T 13-10-2018 ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 Gene3D G3DSA:3.40.50.2300 1 129 1.3E-28 T 13-10-2018 ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 SUPERFAMILY SSF52172 1 134 2.56E-27 T 13-10-2018 IPR011006 CheY-like superfamily ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 Pfam PF00072 Response regulator receiver domain 4 116 1.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 SUPERFAMILY SSF46894 146 212 1.26E-18 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 1.5E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 1.5E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 1.5E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 1.5E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 SMART SM00448 2 116 2.6E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 SMART SM00421 151 208 1.7E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ambt_01120 0fe8364d5f23e6f586023a0dda893273 219 Gene3D G3DSA:1.10.10.10 152 215 1.3E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_09895 8453230fd368950a4430c25c78b35438 389 Pfam PF00756 Putative esterase 35 189 1.0E-26 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 ambt_09895 8453230fd368950a4430c25c78b35438 389 Gene3D G3DSA:3.40.50.1820 20 330 4.1E-80 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_09895 8453230fd368950a4430c25c78b35438 389 SUPERFAMILY SSF53474 26 254 4.83E-49 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_14315 58197d7c51b769ce2fd271fb305a9af4 171 SUPERFAMILY SSF52799 19 149 1.24E-11 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like ambt_14315 58197d7c51b769ce2fd271fb305a9af4 171 Gene3D G3DSA:3.90.190.10 13 153 2.5E-12 T 13-10-2018 IPR029021 Protein-tyrosine phosphatase-like ambt_14970 e67756435b5ff9f71dbebac3e194f02c 266 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 9.1E-74 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ambt_14970 e67756435b5ff9f71dbebac3e194f02c 266 Pfam PF02673 Bacitracin resistance protein BacA 7 259 2.4E-83 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ambt_14970 e67756435b5ff9f71dbebac3e194f02c 266 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.852 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ambt_21470 a4c19d757472d415f788d96503d068ec 623 SUPERFAMILY SSF53448 89 368 3.0E-19 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_21470 a4c19d757472d415f788d96503d068ec 623 Pfam PF13632 Glycosyl transferase family group 2 188 379 3.7E-14 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_21470 a4c19d757472d415f788d96503d068ec 623 Gene3D G3DSA:3.90.550.10 79 317 1.2E-17 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_06170 757c575be25130f1e547641d7f1056c1 368 Pfam PF01609 Transposase DDE domain 104 336 5.4E-24 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_06170 757c575be25130f1e547641d7f1056c1 368 Pfam PF13808 DDE_Tnp_1-associated 8 94 4.6E-28 T 13-10-2018 IPR032806 H repeat-associated protein, N-terminal ambt_05500 42fe9c87a1e6639653fd0eb177781dfb 663 Pfam PF00326 Prolyl oligopeptidase family 450 662 1.4E-40 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ambt_05500 42fe9c87a1e6639653fd0eb177781dfb 663 Gene3D G3DSA:3.40.50.1820 398 663 1.8E-64 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_05500 42fe9c87a1e6639653fd0eb177781dfb 663 SUPERFAMILY SSF53474 407 660 2.52E-63 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_05500 42fe9c87a1e6639653fd0eb177781dfb 663 SUPERFAMILY SSF82171 47 399 2.35E-5 T 13-10-2018 ambt_19005 26d441aacf770c3e3dc159a0a634935a 384 Pfam PF04230 Polysaccharide pyruvyl transferase 18 318 1.6E-16 T 13-10-2018 IPR007345 Polysaccharide pyruvyl transferase ambt_18285 2d680bc8c4ec6c1b1310f78441474755 157 Pfam PF08534 Redoxin 4 154 1.9E-34 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ambt_18285 2d680bc8c4ec6c1b1310f78441474755 157 SUPERFAMILY SSF52833 1 157 3.92E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_18285 2d680bc8c4ec6c1b1310f78441474755 157 Gene3D G3DSA:3.40.30.10 2 157 1.7E-57 T 13-10-2018 ambt_01505 0cd110e4705f9dc74d4dea59a2db25a2 403 Pfam PF01566 Natural resistance-associated macrophage protein 20 376 2.4E-84 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ambt_03660 e8bb86f30f0242089755605e6acc357a 395 SUPERFAMILY SSF53448 55 319 4.5E-35 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_03660 e8bb86f30f0242089755605e6acc357a 395 Pfam PF00535 Glycosyl transferase family 2 59 197 1.6E-20 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_03660 e8bb86f30f0242089755605e6acc357a 395 Gene3D G3DSA:3.90.550.10 56 248 4.1E-23 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_13145 41930decad02ad28c192a5ea5053d653 198 Gene3D G3DSA:3.40.50.150 1 189 8.5E-11 T 13-10-2018 ambt_13145 41930decad02ad28c192a5ea5053d653 198 SUPERFAMILY SSF53335 8 190 2.76E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_13145 41930decad02ad28c192a5ea5053d653 198 Pfam PF06080 Protein of unknown function (DUF938) 7 197 1.9E-52 T 13-10-2018 IPR010342 Protein of unknown function DUF938 ambt_02530 2749986fc5025385a28f1ec45105b5c2 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 353 2.5E-55 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_02530 2749986fc5025385a28f1ec45105b5c2 446 PIRSF PIRSF006603 1 445 2.0E-83 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_02530 2749986fc5025385a28f1ec45105b5c2 446 Pfam PF01554 MatE 26 187 2.6E-20 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_02530 2749986fc5025385a28f1ec45105b5c2 446 Pfam PF01554 MatE 245 406 2.4E-27 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ambt_16885 c728bde0da246109c53e75c3506a410d 104 SUPERFAMILY SSF55658 20 61 7.85E-12 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ambt_16885 c728bde0da246109c53e75c3506a410d 104 Gene3D G3DSA:3.40.970.10 18 62 4.8E-14 T 13-10-2018 IPR037056 Ribonuclease H1, N-terminal domain superfamily ambt_16885 c728bde0da246109c53e75c3506a410d 104 Pfam PF01693 Caulimovirus viroplasmin 19 60 3.2E-15 T 13-10-2018 IPR011320 Ribonuclease H1, N-terminal ambt_07915 c44ced338bef618f999f22c71636815d 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.3E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_07915 c44ced338bef618f999f22c71636815d 295 Pfam PF03466 LysR substrate binding domain 92 290 8.4E-36 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_07915 c44ced338bef618f999f22c71636815d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.9E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_07915 c44ced338bef618f999f22c71636815d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.9E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_07915 c44ced338bef618f999f22c71636815d 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.9E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_07915 c44ced338bef618f999f22c71636815d 295 Gene3D G3DSA:3.40.190.290 93 294 2.6E-39 T 13-10-2018 ambt_07915 c44ced338bef618f999f22c71636815d 295 SUPERFAMILY SSF53850 92 293 1.63E-36 T 13-10-2018 ambt_07915 c44ced338bef618f999f22c71636815d 295 SUPERFAMILY SSF46785 3 113 4.98E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_07915 c44ced338bef618f999f22c71636815d 295 Gene3D G3DSA:1.10.10.10 3 92 2.5E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_18785 fce2b48c0fb98301a1a2c3a4f63d25d2 584 Pfam PF05960 Bacterial protein of unknown function (DUF885) 43 573 7.6E-166 T 13-10-2018 IPR010281 Protein of unknown function DUF885 ambt_07375 8cdc66eadedad97063e4b86c0f09f37f 194 Gene3D G3DSA:1.20.120.1630 1 194 4.4E-29 T 13-10-2018 ambt_07375 8cdc66eadedad97063e4b86c0f09f37f 194 Pfam PF04191 Phospholipid methyltransferase 80 177 1.9E-12 T 13-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 ambt_18720 8045baafaffbfccfabf6ae0b9cca27f4 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.439 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_18720 8045baafaffbfccfabf6ae0b9cca27f4 78 Gene3D G3DSA:2.30.170.40 2 78 4.0E-33 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_18720 8045baafaffbfccfabf6ae0b9cca27f4 78 Pfam PF00830 Ribosomal L28 family 3 62 8.5E-26 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_18720 8045baafaffbfccfabf6ae0b9cca27f4 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.3E-27 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_18720 8045baafaffbfccfabf6ae0b9cca27f4 78 SUPERFAMILY SSF143800 2 77 1.96E-29 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_18915 82e0705807b2476407905415f67a8617 458 Pfam PF04577 Protein of unknown function (DUF563) 91 280 1.8E-24 T 13-10-2018 IPR007657 Glycosyltransferase 61 GO:0016757 ambt_18360 b119b88b457fd7c116ff7f8e871d2fab 491 Gene3D G3DSA:1.10.4160.10 10 488 2.0E-121 T 13-10-2018 IPR038271 Purine-cytosine permease superfamily ambt_18360 b119b88b457fd7c116ff7f8e871d2fab 491 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 30 450 2.4E-94 T 13-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 ambt_20810 25f46f4c700d6d097665229d77046170 157 Pfam PF07511 Protein of unknown function (DUF1525) 31 147 3.4E-27 T 13-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 ambt_20810 25f46f4c700d6d097665229d77046170 157 TIGRFAM TIGR03757 conj_TIGR03757: integrating conjugative element protein, PFL_4709 family 31 147 2.0E-28 T 13-10-2018 IPR011090 Integrating conjugative element protein, PFL4709 ambt_19715 8dada2a782ec205a898260b49819bc3c 192 SUPERFAMILY SSF50814 26 190 1.37E-49 T 13-10-2018 IPR012674 Calycin ambt_19715 8dada2a782ec205a898260b49819bc3c 192 PRINTS PR01171 Bacterial lipocalin signature 84 93 7.6E-36 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ambt_19715 8dada2a782ec205a898260b49819bc3c 192 PRINTS PR01171 Bacterial lipocalin signature 151 162 7.6E-36 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ambt_19715 8dada2a782ec205a898260b49819bc3c 192 PRINTS PR01171 Bacterial lipocalin signature 65 81 7.6E-36 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ambt_19715 8dada2a782ec205a898260b49819bc3c 192 PRINTS PR01171 Bacterial lipocalin signature 135 143 7.6E-36 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ambt_19715 8dada2a782ec205a898260b49819bc3c 192 PRINTS PR01171 Bacterial lipocalin signature 178 188 7.6E-36 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ambt_19715 8dada2a782ec205a898260b49819bc3c 192 PRINTS PR01171 Bacterial lipocalin signature 48 62 7.6E-36 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ambt_19715 8dada2a782ec205a898260b49819bc3c 192 PRINTS PR01171 Bacterial lipocalin signature 118 132 7.6E-36 T 13-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 ambt_19715 8dada2a782ec205a898260b49819bc3c 192 ProSitePatterns PS00213 Lipocalin signature. 47 60 - T 13-10-2018 IPR022272 Lipocalin family conserved site ambt_19715 8dada2a782ec205a898260b49819bc3c 192 Gene3D G3DSA:2.40.128.20 16 190 1.6E-52 T 13-10-2018 IPR012674 Calycin ambt_19715 8dada2a782ec205a898260b49819bc3c 192 Pfam PF08212 Lipocalin-like domain 49 188 1.0E-44 T 13-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain ambt_19715 8dada2a782ec205a898260b49819bc3c 192 PIRSF PIRSF036893 20 192 1.9E-45 T 13-10-2018 IPR022271 Lipocalin, ApoD type ambt_04630 0dd458c2879484dd5123332e0cb4af3d 115 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 45 109 3.6E-7 T 13-10-2018 IPR009387 Toxin HigB-2 ambt_04630 0dd458c2879484dd5123332e0cb4af3d 115 PIRSF PIRSF039032 1 110 1.7E-39 T 13-10-2018 IPR009387 Toxin HigB-2 ambt_18685 68e33de66a3de7877e740300f5bab757 158 Gene3D G3DSA:3.40.190.10 41 158 1.7E-12 T 13-10-2018 ambt_18685 68e33de66a3de7877e740300f5bab757 158 Pfam PF12849 PBP superfamily domain 32 150 4.9E-7 T 13-10-2018 IPR024370 PBP domain ambt_18685 68e33de66a3de7877e740300f5bab757 158 SUPERFAMILY SSF53850 30 150 1.09E-13 T 13-10-2018 ambt_13925 6d0e17d5dcf825cd8fa8a560a72fa3fa 249 Pfam PF01578 Cytochrome C assembly protein 23 184 1.2E-30 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ambt_13925 6d0e17d5dcf825cd8fa8a560a72fa3fa 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 1.3E-60 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13925 6d0e17d5dcf825cd8fa8a560a72fa3fa 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 1.3E-60 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13925 6d0e17d5dcf825cd8fa8a560a72fa3fa 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 1.3E-60 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13925 6d0e17d5dcf825cd8fa8a560a72fa3fa 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 1.3E-60 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13925 6d0e17d5dcf825cd8fa8a560a72fa3fa 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 1.3E-60 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13925 6d0e17d5dcf825cd8fa8a560a72fa3fa 249 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 1.3E-60 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_13925 6d0e17d5dcf825cd8fa8a560a72fa3fa 249 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 9.7E-79 T 13-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ambt_19920 527650baabbb0bba6c37b53c5f4dbcf3 154 SUPERFAMILY SSF103039 1 152 2.09E-33 T 13-10-2018 IPR028976 CheC-like superfamily ambt_19920 527650baabbb0bba6c37b53c5f4dbcf3 154 Gene3D G3DSA:3.40.1550.10 1 154 1.2E-44 T 13-10-2018 IPR028976 CheC-like superfamily ambt_19920 527650baabbb0bba6c37b53c5f4dbcf3 154 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 4.7E-24 T 13-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain ambt_01230 80e867c2f05e2122e058f46a2188610c 424 SUPERFAMILY SSF56935 303 422 3.46E-6 T 13-10-2018 ambt_10670 8a43c0bf052da9e30da3924fb73e31c0 400 Pfam PF10082 Putative beta-barrel porin 2 22 398 8.5E-34 T 13-10-2018 IPR018759 Putative beta-barrel porin 2 ambt_03425 7c8a3c3bcf54bdd5e26daccb1151cd97 267 Gene3D G3DSA:3.10.620.30 102 234 2.1E-16 T 13-10-2018 ambt_03425 7c8a3c3bcf54bdd5e26daccb1151cd97 267 Pfam PF01841 Transglutaminase-like superfamily 144 219 1.4E-12 T 13-10-2018 IPR002931 Transglutaminase-like ambt_03425 7c8a3c3bcf54bdd5e26daccb1151cd97 267 SMART SM00460 158 222 5.2E-11 T 13-10-2018 IPR002931 Transglutaminase-like ambt_03425 7c8a3c3bcf54bdd5e26daccb1151cd97 267 SUPERFAMILY SSF54001 100 233 1.34E-18 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ambt_02380 a15bb3b82fd7515da1ef39e3fd209856 258 Pfam PF04338 Protein of unknown function, DUF481 43 257 2.6E-59 T 13-10-2018 IPR007433 Protein of unknown function DUF481 ambt_07340 73d80665515758d09b2ef1d8c0ed3667 208 Gene3D G3DSA:1.20.1510.10 72 197 1.7E-7 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ambt_07340 73d80665515758d09b2ef1d8c0ed3667 208 SUPERFAMILY SSF161111 13 197 6.93E-34 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ambt_07340 73d80665515758d09b2ef1d8c0ed3667 208 Pfam PF01545 Cation efflux family 23 197 3.4E-16 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ambt_03765 02d308dc5172d23f1d50803db3fac0ee 138 Pfam PF03994 Domain of Unknown Function (DUF350) 83 136 2.2E-13 T 13-10-2018 IPR007140 Protein of unknown function DUF350 ambt_03765 02d308dc5172d23f1d50803db3fac0ee 138 Pfam PF03994 Domain of Unknown Function (DUF350) 17 70 1.4E-12 T 13-10-2018 IPR007140 Protein of unknown function DUF350 ambt_10850 1dee061b6a375bc99bcf0ad09121149e 172 Gene3D G3DSA:1.10.3330.10 14 169 6.5E-48 T 13-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ambt_10850 1dee061b6a375bc99bcf0ad09121149e 172 Pfam PF09349 OHCU decarboxylase 7 162 1.5E-31 T 13-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ambt_10850 1dee061b6a375bc99bcf0ad09121149e 172 SUPERFAMILY SSF158694 2 165 1.57E-39 T 13-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ambt_10850 1dee061b6a375bc99bcf0ad09121149e 172 TIGRFAM TIGR03180 UraD_2: OHCU decarboxylase 6 165 5.0E-47 T 13-10-2018 IPR017595 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2 ambt_20825 c6c1f962ab8a4634cd0982ec90867961 450 Pfam PF03743 Bacterial conjugation TrbI-like protein 233 425 1.9E-5 T 13-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI ambt_20825 c6c1f962ab8a4634cd0982ec90867961 450 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 10 438 5.3E-99 T 13-10-2018 IPR021207 Integrating conjugative element protein, PFL4705 ambt_15780 9fbda94ffd4f6bf99f3ca1b8877f8b43 458 Pfam PF03553 Na+/H+ antiporter family 171 453 8.3E-45 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 ambt_18130 cd50fdc3ccb0ab4c1f377cbc0361fd55 487 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 3 474 38.23 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 ambt_18130 cd50fdc3ccb0ab4c1f377cbc0361fd55 487 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 16 457 1.7E-132 T 13-10-2018 IPR003846 Uncharacterised protein family UPF0061 ambt_02740 4c6e9417a7bc2af643bb3ebede733361 232 Pfam PF01810 LysE type translocator 49 229 7.6E-20 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ambt_10390 4980b06d688d4b3131e982a1a358f509 188 Pfam PF00156 Phosphoribosyl transferase domain 6 161 3.5E-13 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ambt_10390 4980b06d688d4b3131e982a1a358f509 188 SUPERFAMILY SSF53271 3 162 4.97E-27 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like ambt_10390 4980b06d688d4b3131e982a1a358f509 188 Gene3D G3DSA:3.40.50.2020 1 185 4.1E-34 T 13-10-2018 ambt_16235 cf3f44e482726c559d1ddd51ccf74be9 407 SUPERFAMILY SSF109604 131 291 2.26E-19 T 13-10-2018 ambt_16235 cf3f44e482726c559d1ddd51ccf74be9 407 Gene3D G3DSA:1.10.3210.10 122 395 6.3E-27 T 13-10-2018 ambt_16235 cf3f44e482726c559d1ddd51ccf74be9 407 Pfam PF08668 HDOD domain 136 286 4.4E-12 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD ambt_14960 5bde3ce1b182c35e3938f46ad233940a 568 Pfam PF03571 Peptidase family M49 190 399 2.9E-13 T 13-10-2018 IPR039461 Peptidase family M49 ambt_11370 0e025739bef0ac910b7ea5673559736f 124 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 27 59 1.9E-9 T 13-10-2018 IPR001451 Hexapeptide repeat ambt_11370 0e025739bef0ac910b7ea5673559736f 124 Gene3D G3DSA:2.160.10.10 3 102 3.0E-26 T 13-10-2018 ambt_11370 0e025739bef0ac910b7ea5673559736f 124 SUPERFAMILY SSF51161 22 77 6.79E-25 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_02070 f194e6ae56b5e8614e7ebd044a43311b 242 PIRSF PIRSF015601 3 241 4.0E-60 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ambt_02070 f194e6ae56b5e8614e7ebd044a43311b 242 Gene3D G3DSA:3.40.1280.10 74 242 1.1E-59 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ambt_02070 f194e6ae56b5e8614e7ebd044a43311b 242 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 241 3.3E-68 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ambt_02070 f194e6ae56b5e8614e7ebd044a43311b 242 Gene3D G3DSA:2.40.240.20 1 68 7.8E-21 T 13-10-2018 ambt_02070 f194e6ae56b5e8614e7ebd044a43311b 242 SUPERFAMILY SSF75217 75 242 1.4E-50 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases ambt_02070 f194e6ae56b5e8614e7ebd044a43311b 242 Pfam PF04452 RNA methyltransferase 19 237 1.1E-71 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ambt_02070 f194e6ae56b5e8614e7ebd044a43311b 242 SUPERFAMILY SSF88697 2 69 2.29E-15 T 13-10-2018 IPR015947 PUA-like superfamily ambt_14095 a61c24fa3026270bc01929c1cc13a79e 110 Pfam PF12514 Protein of unknown function (DUF3718) 42 103 2.1E-21 T 13-10-2018 IPR022193 Protein of unknown function DUF3718 ambt_10640 d861da456ef8d682cce6b206a515f1cf 470 Pfam PF04932 O-Antigen ligase 246 388 1.5E-18 T 13-10-2018 IPR007016 O-antigen ligase-related ambt_15730 c4a298342aaf17b864efc55f6c8dd469 372 SUPERFAMILY SSF56935 23 328 2.75E-17 T 13-10-2018 ambt_15730 c4a298342aaf17b864efc55f6c8dd469 372 Gene3D G3DSA:2.40.160.10 18 261 5.8E-10 T 13-10-2018 IPR023614 Porin domain superfamily ambt_21510 48ae09affd25018010fb9cf58d5d82c9 68 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 5 62 2.1E-25 T 13-10-2018 IPR012658 Conserved hypothetical protein CHP02443 ambt_21510 48ae09affd25018010fb9cf58d5d82c9 68 Pfam PF09526 Probable metal-binding protein (DUF2387) 6 61 1.1E-18 T 13-10-2018 IPR012658 Conserved hypothetical protein CHP02443 ambt_00130 527a2dabae660e6397d5fadb68ed3fd0 191 Gene3D G3DSA:3.90.870.10 6 190 1.8E-55 T 13-10-2018 ambt_00130 527a2dabae660e6397d5fadb68ed3fd0 191 Pfam PF01300 Telomere recombination 18 190 1.6E-39 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 ambt_00130 527a2dabae660e6397d5fadb68ed3fd0 191 SUPERFAMILY SSF55821 10 189 3.97E-48 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ambt_00130 527a2dabae660e6397d5fadb68ed3fd0 191 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 9 190 37.737 T 13-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 ambt_00565 dfcb7a89eff6516ddaa6811276c3d61d 168 Pfam PF10688 Bacterial inner membrane protein 4 160 1.6E-27 T 13-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV ambt_06005 990e2d205132633603934d3cf50a5f04 124 Pfam PF04219 Protein of unknown function, DUF 18 104 4.7E-33 T 13-10-2018 IPR007335 Protein of unknown function DUF413 ambt_20845 3a64a6d688008745deabc57157772743 128 Pfam PF11190 Protein of unknown function (DUF2976) 39 127 2.9E-24 T 13-10-2018 IPR021356 Integrating conjugative element protein PFL4702 ambt_20845 3a64a6d688008745deabc57157772743 128 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 30 128 4.6E-17 T 13-10-2018 IPR021356 Integrating conjugative element protein PFL4702 ambt_17325 b6f81da76e25623f2f8d265a61149fda 239 Pfam PF08668 HDOD domain 42 160 6.1E-16 T 13-10-2018 IPR013976 Metal-dependent hydrolase HDOD ambt_17325 b6f81da76e25623f2f8d265a61149fda 239 Gene3D G3DSA:1.10.3210.10 32 205 7.6E-25 T 13-10-2018 ambt_17325 b6f81da76e25623f2f8d265a61149fda 239 SUPERFAMILY SSF109604 17 202 4.08E-31 T 13-10-2018 ambt_06830 16d7a891bea68c0022330c952372ee8e 419 Gene3D G3DSA:3.40.190.10 173 318 8.4E-14 T 13-10-2018 ambt_06830 16d7a891bea68c0022330c952372ee8e 419 SUPERFAMILY SSF53850 54 415 2.48E-30 T 13-10-2018 ambt_06830 16d7a891bea68c0022330c952372ee8e 419 PIRSF PIRSF029172 13 418 1.4E-122 T 13-10-2018 IPR027020 Protein ynjB ambt_06830 16d7a891bea68c0022330c952372ee8e 419 Pfam PF13416 Bacterial extracellular solute-binding protein 77 352 2.7E-19 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein ambt_06830 16d7a891bea68c0022330c952372ee8e 419 Gene3D G3DSA:3.40.190.10 81 354 8.4E-14 T 13-10-2018 ambt_00115 3813655e0f17b21327e2171d51a360b4 385 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 92 305 8.8E-72 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 ambt_00115 3813655e0f17b21327e2171d51a360b4 385 Pfam PF02481 DNA recombination-mediator protein A 92 297 1.3E-73 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 ambt_00115 3813655e0f17b21327e2171d51a360b4 385 SUPERFAMILY SSF102405 101 306 2.44E-41 T 13-10-2018 ambt_00115 3813655e0f17b21327e2171d51a360b4 385 Gene3D G3DSA:3.40.50.450 7 308 2.7E-92 T 13-10-2018 ambt_00855 3f4a80be9ba04bcb5bcbc4896e2a71a5 389 SUPERFAMILY SSF53383 42 380 2.18E-65 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ambt_00855 3f4a80be9ba04bcb5bcbc4896e2a71a5 389 Gene3D G3DSA:3.40.640.10 63 285 2.4E-79 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ambt_00855 3f4a80be9ba04bcb5bcbc4896e2a71a5 389 Pfam PF00155 Aminotransferase class I and II 50 376 7.1E-45 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ambt_00855 3f4a80be9ba04bcb5bcbc4896e2a71a5 389 Gene3D G3DSA:3.90.1150.10 47 365 2.4E-79 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ambt_16815 8a26cc37c999191ec80958256baed77d 282 Pfam PF14319 Transposase zinc-binding domain 25 127 8.9E-25 T 13-10-2018 IPR026889 Transposase zinc-binding domain ambt_16815 8a26cc37c999191ec80958256baed77d 282 Pfam PF04986 Putative transposase 157 241 4.0E-13 T 13-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 ambt_06870 54656d380182faedf6d9a5e919debdca 178 Gene3D G3DSA:1.10.357.10 2 176 1.1E-21 T 13-10-2018 ambt_06870 54656d380182faedf6d9a5e919debdca 178 SUPERFAMILY SSF46689 3 71 2.36E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_10500 d4611f165b1345377e54fc166220f8fb 111 PIRSF PIRSF006298 1 107 1.3E-33 T 13-10-2018 IPR016480 Glucose translocase, bactoprenol-linked ambt_10500 d4611f165b1345377e54fc166220f8fb 111 Pfam PF04138 GtrA-like protein 1 105 7.7E-11 T 13-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 ambt_04535 91cf8835a6f3cdcad5d779613c17c5eb 283 Gene3D G3DSA:3.20.20.150 3 280 1.7E-85 T 13-10-2018 ambt_04535 91cf8835a6f3cdcad5d779613c17c5eb 283 SUPERFAMILY SSF51658 27 218 5.47E-9 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily ambt_04535 91cf8835a6f3cdcad5d779613c17c5eb 283 Pfam PF05114 Protein of unknown function (DUF692) 6 267 3.3E-100 T 13-10-2018 IPR007801 Uncharacterised protein family UPF0276 ambt_20625 1c11b0e303abe1b328c0717d329463ed 232 Gene3D G3DSA:1.10.4190.10 9 210 8.9E-48 T 13-10-2018 IPR038277 UreF domain superfamily ambt_20625 1c11b0e303abe1b328c0717d329463ed 232 PIRSF PIRSF009467 8 232 9.0E-54 T 13-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 ambt_20625 1c11b0e303abe1b328c0717d329463ed 232 Hamap MF_01385 Urease accessory protein UreF [ureF]. 11 232 28.843 T 13-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 ambt_20625 1c11b0e303abe1b328c0717d329463ed 232 Pfam PF01730 UreF 44 189 6.3E-32 T 13-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 ambt_21575 57f1e0fa1c657868c93df65bb30beea1 487 SUPERFAMILY SSF53098 163 301 1.42E-6 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_21575 57f1e0fa1c657868c93df65bb30beea1 487 Pfam PF00665 Integrase core domain 138 268 2.9E-17 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_12440 670975b52f5862d5136428e98410fa98 576 Pfam PF02080 TrkA-C domain 294 354 6.3E-8 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ambt_12440 670975b52f5862d5136428e98410fa98 576 Pfam PF02080 TrkA-C domain 208 275 4.9E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ambt_12440 670975b52f5862d5136428e98410fa98 576 Pfam PF03600 Citrate transporter 19 520 5.0E-35 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 ambt_12440 670975b52f5862d5136428e98410fa98 576 Gene3D G3DSA:3.30.70.1450 204 280 7.5E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_12440 670975b52f5862d5136428e98410fa98 576 Gene3D G3DSA:3.30.70.1450 291 361 1.4E-11 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_12440 670975b52f5862d5136428e98410fa98 576 SUPERFAMILY SSF116726 203 283 5.62E-16 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_12440 670975b52f5862d5136428e98410fa98 576 SUPERFAMILY SSF116726 292 356 1.19E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ambt_00265 da9a2a57982000a9a39e51bf9b5d181f 383 Pfam PF02690 Na+/Pi-cotransporter 217 333 3.0E-18 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 ambt_00265 da9a2a57982000a9a39e51bf9b5d181f 383 Pfam PF02690 Na+/Pi-cotransporter 31 148 5.9E-21 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 ambt_00305 c334f1b537af4ff502ff0420e08331a6 212 Pfam PF00924 Mechanosensitive ion channel 61 170 1.2E-8 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ambt_00305 c334f1b537af4ff502ff0420e08331a6 212 SUPERFAMILY SSF50182 105 170 3.27E-7 T 13-10-2018 IPR010920 LSM domain superfamily ambt_02715 762fb88fd87d020c96cd3c1ac9125ced 409 Gene3D G3DSA:1.20.1530.20 5 406 6.9E-15 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily ambt_02715 762fb88fd87d020c96cd3c1ac9125ced 409 Pfam PF00999 Sodium/hydrogen exchanger family 11 399 3.8E-45 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ambt_01155 df2ded7cdb00c1e30b235aedf3121a29 91 Gene3D G3DSA:1.10.10.1150 1 89 4.4E-22 T 13-10-2018 ambt_01155 df2ded7cdb00c1e30b235aedf3121a29 91 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 24 88 1.2E-14 T 13-10-2018 IPR008792 Coenzyme PQQ synthesis D ambt_01155 df2ded7cdb00c1e30b235aedf3121a29 91 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 8 88 5.9E-30 T 13-10-2018 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 ambt_03235 cf65ede6ef1203fb2f637edf81e3c5c5 342 SUPERFAMILY SSF55874 218 316 2.02E-5 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_03235 cf65ede6ef1203fb2f637edf81e3c5c5 342 Gene3D G3DSA:3.30.565.10 211 338 3.9E-8 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_03235 cf65ede6ef1203fb2f637edf81e3c5c5 342 Pfam PF06580 Histidine kinase 156 234 5.6E-20 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 ambt_03535 956dd72308758765ab9ecab8cb22557c 126 Pfam PF01541 GIY-YIG catalytic domain 23 95 6.0E-12 T 13-10-2018 IPR000305 GIY-YIG endonuclease ambt_03535 956dd72308758765ab9ecab8cb22557c 126 SUPERFAMILY SSF82771 22 95 1.06E-6 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ambt_03535 956dd72308758765ab9ecab8cb22557c 126 Gene3D G3DSA:3.40.1440.10 16 118 2.7E-21 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ambt_10720 afd0e7f7601e22105553a202cc9dc56e 209 Pfam PF02517 CAAX protease self-immunity 103 191 1.7E-11 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 ambt_17040 b89f26f96ffb85e7d8b99622ba326791 227 SUPERFAMILY SSF55729 69 205 1.36E-10 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_17040 b89f26f96ffb85e7d8b99622ba326791 227 Gene3D G3DSA:3.40.630.30 61 207 6.3E-9 T 13-10-2018 ambt_13430 cd95d53a6e96978ab24694ae53393dbe 162 Gene3D G3DSA:3.30.160.170 59 148 3.4E-15 T 13-10-2018 IPR035924 FlaG-like superfamily ambt_13430 cd95d53a6e96978ab24694ae53393dbe 162 Pfam PF03646 FlaG protein 61 159 2.2E-24 T 13-10-2018 IPR005186 FlaG protein ambt_13430 cd95d53a6e96978ab24694ae53393dbe 162 SUPERFAMILY SSF160214 66 161 6.67E-23 T 13-10-2018 IPR035924 FlaG-like superfamily ambt_02890 402664c0eff5f125b4fcec578b8653f3 294 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 59 81 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site ambt_02890 402664c0eff5f125b4fcec578b8653f3 294 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 7 285 2.1E-82 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ambt_02890 402664c0eff5f125b4fcec578b8653f3 294 Gene3D G3DSA:1.10.357.140 17 182 1.6E-17 T 13-10-2018 ambt_02890 402664c0eff5f125b4fcec578b8653f3 294 Pfam PF01040 UbiA prenyltransferase family 21 264 6.8E-53 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 ambt_02890 402664c0eff5f125b4fcec578b8653f3 294 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 287 17.076 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ambt_01320 a6cfd9da0305ecb176d8f32e0e4bd365 425 Gene3D G3DSA:3.30.70.270 247 424 8.4E-46 T 13-10-2018 ambt_01320 a6cfd9da0305ecb176d8f32e0e4bd365 425 SMART SM00267 237 421 9.5E-43 T 13-10-2018 IPR000160 GGDEF domain ambt_01320 a6cfd9da0305ecb176d8f32e0e4bd365 425 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 420 5.1E-36 T 13-10-2018 IPR000160 GGDEF domain ambt_01320 a6cfd9da0305ecb176d8f32e0e4bd365 425 Pfam PF00990 Diguanylate cyclase, GGDEF domain 249 416 1.8E-34 T 13-10-2018 IPR000160 GGDEF domain ambt_01320 a6cfd9da0305ecb176d8f32e0e4bd365 425 SUPERFAMILY SSF55073 253 420 4.32E-36 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_10010 d496fea98f66ecfc882f15e588ef4c83 177 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 1.7E-19 T 13-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD ambt_03075 3f962a4ea16915c4c6e26d42e5f4fed3 794 Pfam PF12392 Collagenase 352 489 1.1E-4 T 13-10-2018 IPR020988 Peptidase U32, collagenase ambt_03075 3f962a4ea16915c4c6e26d42e5f4fed3 794 Pfam PF01136 Peptidase family U32 82 297 2.9E-65 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 ambt_11365 9ffc55762b60cca3672e2d5e7bfbce11 238 PIRSF PIRSF016557 1 237 1.5E-67 T 13-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 ambt_11365 9ffc55762b60cca3672e2d5e7bfbce11 238 Gene3D G3DSA:3.20.20.140 1 237 6.0E-76 T 13-10-2018 ambt_11365 9ffc55762b60cca3672e2d5e7bfbce11 238 SUPERFAMILY SSF89550 1 202 3.41E-12 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ambt_17300 8ae4d02369ba8b47ce36b65f9f13e8a9 371 SUPERFAMILY SSF48452 84 252 7.21E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_17300 8ae4d02369ba8b47ce36b65f9f13e8a9 371 Gene3D G3DSA:1.25.40.10 53 365 4.8E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_18810 934040829ae5d5837dc3b57a3d203f0b 265 Gene3D G3DSA:3.40.190.10 43 226 8.7E-6 T 13-10-2018 ambt_18810 934040829ae5d5837dc3b57a3d203f0b 265 SUPERFAMILY SSF53850 19 229 1.23E-12 T 13-10-2018 ambt_18810 934040829ae5d5837dc3b57a3d203f0b 265 Gene3D G3DSA:3.40.190.10 110 201 8.7E-6 T 13-10-2018 ambt_09340 83ebd6bbc573cc0fb2ecd615ac1c6dfc 175 SUPERFAMILY SSF54427 23 142 3.51E-23 T 13-10-2018 IPR032710 NTF2-like domain superfamily ambt_09340 83ebd6bbc573cc0fb2ecd615ac1c6dfc 175 Pfam PF02810 SEC-C motif 154 171 8.3E-9 T 13-10-2018 IPR004027 SEC-C motif ambt_09340 83ebd6bbc573cc0fb2ecd615ac1c6dfc 175 Gene3D G3DSA:3.10.450.50 1 173 6.1E-46 T 13-10-2018 ambt_09340 83ebd6bbc573cc0fb2ecd615ac1c6dfc 175 SUPERFAMILY SSF103642 151 171 3.76E-7 T 13-10-2018 ambt_06545 6d29b002187eec6fa619cfd321401c12 346 SUPERFAMILY SSF56112 6 335 1.33E-60 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily ambt_06545 6d29b002187eec6fa619cfd321401c12 346 Gene3D G3DSA:3.30.200.20 5 106 1.9E-36 T 13-10-2018 ambt_06545 6d29b002187eec6fa619cfd321401c12 346 Gene3D G3DSA:3.90.1200.10 107 346 7.7E-84 T 13-10-2018 ambt_06545 6d29b002187eec6fa619cfd321401c12 346 Pfam PF01636 Phosphotransferase enzyme family 29 253 1.8E-51 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase ambt_10445 eb180853c0936643c2a0d055a8b1c60c 73 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 4 64 9.2E-17 T 13-10-2018 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system ambt_12280 1bc475c5d9c988f852460c91ddb7c89b 414 Pfam PF03600 Citrate transporter 6 360 1.4E-22 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 ambt_02020 729bb0ef481a02bc982c97dad1a2c48a 146 Pfam PF14467 Domain of unknown function (DUF4426) 28 145 1.6E-43 T 13-10-2018 IPR025218 Domain of unknown function DUF4426 ambt_02020 729bb0ef481a02bc982c97dad1a2c48a 146 Gene3D G3DSA:2.60.40.3340 20 146 6.7E-38 T 13-10-2018 ambt_20290 94ed1c357e60d4b518cd7e40f0f5c7da 304 Gene3D G3DSA:2.50.20.10 52 296 5.5E-53 T 13-10-2018 ambt_20290 94ed1c357e60d4b518cd7e40f0f5c7da 304 Pfam PF17131 Outer membrane lipoprotein-sorting protein 116 296 3.5E-47 T 13-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein ambt_05900 30b93b7709321c6566c16ae0bc18d3da 97 Pfam PF07023 Protein of unknown function (DUF1315) 6 85 5.4E-27 T 13-10-2018 IPR009749 Protein of unknown function DUF1315 ambt_15850 20d2fca032bd753276e2b7c11cbd1d22 425 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 21 404 23.009 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ambt_15850 20d2fca032bd753276e2b7c11cbd1d22 425 Pfam PF06965 Na+/H+ antiporter 1 23 398 1.5E-149 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ambt_15850 20d2fca032bd753276e2b7c11cbd1d22 425 Gene3D G3DSA:1.20.1530.10 19 405 6.2E-149 T 13-10-2018 IPR023171 Na/H antiporter domain superfamily ambt_15850 20d2fca032bd753276e2b7c11cbd1d22 425 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 24 398 2.1E-140 T 13-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 ambt_01165 656b2cd2a51a7f53ddafa0edaf9962f2 306 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 3 305 1.7E-119 T 13-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B ambt_01165 656b2cd2a51a7f53ddafa0edaf9962f2 306 SUPERFAMILY SSF56281 1 306 3.16E-52 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_01165 656b2cd2a51a7f53ddafa0edaf9962f2 306 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 306 142.704 T 13-10-2018 IPR011842 Coenzyme PQQ biosynthesis protein B ambt_01165 656b2cd2a51a7f53ddafa0edaf9962f2 306 Gene3D G3DSA:3.60.15.10 1 306 8.6E-85 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ambt_01165 656b2cd2a51a7f53ddafa0edaf9962f2 306 Pfam PF12706 Beta-lactamase superfamily domain 51 273 1.9E-39 T 13-10-2018 IPR001279 Metallo-beta-lactamase ambt_07455 6b554df5abb810776523c5cd54faffc5 598 SUPERFAMILY SSF56349 398 589 1.21E-6 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_07455 6b554df5abb810776523c5cd54faffc5 598 Gene3D G3DSA:1.10.443.10 385 593 1.6E-5 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ambt_16610 1197a66472801ed4ee305c194a05d300 561 Pfam PF00732 GMC oxidoreductase 86 312 1.9E-13 T 13-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 ambt_16610 1197a66472801ed4ee305c194a05d300 561 Pfam PF05199 GMC oxidoreductase 425 548 1.3E-19 T 13-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 ambt_16610 1197a66472801ed4ee305c194a05d300 561 SUPERFAMILY SSF51905 2 557 1.26E-66 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_16610 1197a66472801ed4ee305c194a05d300 561 Gene3D G3DSA:3.50.50.60 237 345 1.5E-9 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_16610 1197a66472801ed4ee305c194a05d300 561 SUPERFAMILY SSF54373 350 497 4.32E-52 T 13-10-2018 ambt_16610 1197a66472801ed4ee305c194a05d300 561 Gene3D G3DSA:3.50.50.60 1 169 1.3E-21 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_16610 1197a66472801ed4ee305c194a05d300 561 Gene3D G3DSA:3.50.50.60 459 556 2.8E-11 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_20395 526cba2ea4cd611e56de0f41122a8f77 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.9E-11 T 13-10-2018 ambt_20395 526cba2ea4cd611e56de0f41122a8f77 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.9E-11 T 13-10-2018 ambt_20395 526cba2ea4cd611e56de0f41122a8f77 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.9E-11 T 13-10-2018 ambt_20395 526cba2ea4cd611e56de0f41122a8f77 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.9E-11 T 13-10-2018 ambt_20395 526cba2ea4cd611e56de0f41122a8f77 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.8E-6 T 13-10-2018 ambt_20395 526cba2ea4cd611e56de0f41122a8f77 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 4.8E-6 T 13-10-2018 ambt_20395 526cba2ea4cd611e56de0f41122a8f77 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 4.8E-6 T 13-10-2018 ambt_20395 526cba2ea4cd611e56de0f41122a8f77 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 334 1.6E-62 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ambt_20395 526cba2ea4cd611e56de0f41122a8f77 430 SUPERFAMILY SSF51905 2 339 2.94E-30 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_20395 526cba2ea4cd611e56de0f41122a8f77 430 Gene3D G3DSA:3.50.50.100 1 408 2.9E-110 T 13-10-2018 ambt_16580 2cc373ecfcfca0a5c12478246fae1a36 298 Pfam PF12006 Protein of unknown function (DUF3500) 9 295 1.0E-61 T 13-10-2018 IPR021889 Protein of unknown function DUF3500 ambt_14885 581cc25a7c9f77aa5e2b1ad2a810d35d 135 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 133 9.9E-32 T 13-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 ambt_14885 581cc25a7c9f77aa5e2b1ad2a810d35d 135 Gene3D G3DSA:3.30.420.270 62 130 2.8E-10 T 13-10-2018 ambt_12830 ff37fa96b9998d5c9d349e4143744691 231 Gene3D G3DSA:3.40.190.10 95 165 1.2E-36 T 13-10-2018 ambt_12830 ff37fa96b9998d5c9d349e4143744691 231 SUPERFAMILY SSF53850 92 231 7.06E-26 T 13-10-2018 ambt_12830 ff37fa96b9998d5c9d349e4143744691 231 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 4.7E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ambt_12830 ff37fa96b9998d5c9d349e4143744691 231 Pfam PF03466 LysR substrate binding domain 91 231 4.1E-27 T 13-10-2018 IPR005119 LysR, substrate-binding ambt_12830 ff37fa96b9998d5c9d349e4143744691 231 Gene3D G3DSA:1.10.10.10 5 94 5.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_12830 ff37fa96b9998d5c9d349e4143744691 231 Gene3D G3DSA:3.40.190.10 166 231 1.2E-36 T 13-10-2018 ambt_12830 ff37fa96b9998d5c9d349e4143744691 231 SUPERFAMILY SSF46785 7 87 7.62E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_19175 f9889c12deffb061dc14056223aa15c9 231 Gene3D G3DSA:2.40.30.10 2 98 3.7E-22 T 13-10-2018 ambt_19175 f9889c12deffb061dc14056223aa15c9 231 Pfam PF00175 Oxidoreductase NAD-binding domain 107 210 3.5E-24 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ambt_19175 f9889c12deffb061dc14056223aa15c9 231 SUPERFAMILY SSF63380 4 94 5.02E-17 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ambt_19175 f9889c12deffb061dc14056223aa15c9 231 SUPERFAMILY SSF52343 102 229 6.81E-36 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ambt_19175 f9889c12deffb061dc14056223aa15c9 231 Gene3D G3DSA:3.40.50.80 101 231 5.2E-30 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ambt_19175 f9889c12deffb061dc14056223aa15c9 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 1.7E-11 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ambt_19175 f9889c12deffb061dc14056223aa15c9 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 106 125 1.7E-11 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ambt_19175 f9889c12deffb061dc14056223aa15c9 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 1.7E-11 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ambt_19175 f9889c12deffb061dc14056223aa15c9 231 PRINTS PR00410 Phenol hydroxylase reductase family signature 131 140 1.7E-11 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ambt_01700 7e345d462782fba9a01c2e675de3ab0d 192 Pfam PF03703 Bacterial PH domain 108 183 3.6E-14 T 13-10-2018 IPR005182 Domain of unknown function DUF304 ambt_20800 79dd7f4748769a5bfcb0693672973c60 442 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 30 437 1.3E-107 T 13-10-2018 IPR021204 Integrating conjugative element protein, PFL4711 ambt_18290 f594670b69163a1bfd15d880e7eed6f8 264 Gene3D G3DSA:3.40.50.150 68 264 8.4E-72 T 13-10-2018 ambt_18290 f594670b69163a1bfd15d880e7eed6f8 264 Pfam PF04445 Putative SAM-dependent methyltransferase 35 260 6.1E-89 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 ambt_18290 f594670b69163a1bfd15d880e7eed6f8 264 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 7 262 35.809 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 ambt_18290 f594670b69163a1bfd15d880e7eed6f8 264 SUPERFAMILY SSF53335 24 261 8.06E-62 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_02645 ce67082a40668587ef2c1d16ccab09a3 415 Gene3D G3DSA:1.10.287.470 102 229 5.2E-25 T 13-10-2018 ambt_02645 ce67082a40668587ef2c1d16ccab09a3 415 Pfam PF13437 HlyD family secretion protein 230 319 6.3E-10 T 13-10-2018 ambt_02645 ce67082a40668587ef2c1d16ccab09a3 415 Gene3D G3DSA:2.40.420.20 56 394 5.2E-25 T 13-10-2018 ambt_02645 ce67082a40668587ef2c1d16ccab09a3 415 Gene3D G3DSA:2.40.30.170 57 336 5.2E-25 T 13-10-2018 ambt_02645 ce67082a40668587ef2c1d16ccab09a3 415 Gene3D G3DSA:2.40.50.100 68 264 5.2E-25 T 13-10-2018 ambt_17675 8035d6999d3871d563df3ba68e931627 497 Gene3D G3DSA:3.90.350.10 242 384 1.0E-5 T 13-10-2018 IPR014736 Transposase, Tn5-like, core ambt_17675 8035d6999d3871d563df3ba68e931627 497 Pfam PF13546 DDE superfamily endonuclease 47 293 3.3E-51 T 13-10-2018 IPR038721 Transposase IS701-like, DDE domain ambt_17675 8035d6999d3871d563df3ba68e931627 497 SUPERFAMILY SSF53098 84 412 1.06E-28 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_01705 9a66b8cbfbad283d429097aab05a27b4 576 PIRSF PIRSF026631 27 576 4.8E-61 T 13-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 ambt_01705 9a66b8cbfbad283d429097aab05a27b4 576 Pfam PF03703 Bacterial PH domain 95 171 2.6E-16 T 13-10-2018 IPR005182 Domain of unknown function DUF304 ambt_01705 9a66b8cbfbad283d429097aab05a27b4 576 Pfam PF03703 Bacterial PH domain 488 563 1.2E-8 T 13-10-2018 IPR005182 Domain of unknown function DUF304 ambt_01705 9a66b8cbfbad283d429097aab05a27b4 576 Pfam PF03703 Bacterial PH domain 343 388 2.3E-4 T 13-10-2018 IPR005182 Domain of unknown function DUF304 ambt_00680 38f557ba93c678a6267a9e816666f4e2 280 Gene3D G3DSA:3.40.50.1820 1 280 6.1E-94 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_00680 38f557ba93c678a6267a9e816666f4e2 280 SUPERFAMILY SSF53474 1 278 2.68E-88 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_00680 38f557ba93c678a6267a9e816666f4e2 280 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 276 3.0E-118 T 13-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 ambt_00680 38f557ba93c678a6267a9e816666f4e2 280 Pfam PF00756 Putative esterase 22 271 4.1E-60 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 ambt_17205 93eee4cf04fdf2b736d7d91b06bf8de1 425 Gene3D G3DSA:1.25.40.10 237 407 6.1E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_17205 93eee4cf04fdf2b736d7d91b06bf8de1 425 SUPERFAMILY SSF48452 236 401 7.59E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_17205 93eee4cf04fdf2b736d7d91b06bf8de1 425 Pfam PF14559 Tetratricopeptide repeat 242 308 3.7E-8 T 13-10-2018 ambt_00270 89e35ea775513cd10a967751372f88c2 388 SUPERFAMILY SSF56935 25 388 3.36E-30 T 13-10-2018 ambt_08415 4d52f2734583fec6b76868f25ca2eeaa 389 Pfam PF00144 Beta-lactamase 55 366 2.6E-41 T 13-10-2018 IPR001466 Beta-lactamase-related ambt_08415 4d52f2734583fec6b76868f25ca2eeaa 389 Gene3D G3DSA:3.40.710.10 37 383 9.1E-68 T 13-10-2018 ambt_08415 4d52f2734583fec6b76868f25ca2eeaa 389 SUPERFAMILY SSF56601 43 386 6.5E-62 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ambt_20420 28b362046a0e6ee3a50f3797b0f319ae 451 Gene3D G3DSA:2.40.160.60 26 451 9.5E-122 T 13-10-2018 ambt_20420 28b362046a0e6ee3a50f3797b0f319ae 451 SUPERFAMILY SSF56935 26 451 1.1E-88 T 13-10-2018 ambt_20420 28b362046a0e6ee3a50f3797b0f319ae 451 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 451 4.8E-111 T 13-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) ambt_20405 1395d1c24cf09fda4432873e41639517 147 Pfam PF11026 Protein of unknown function (DUF2721) 15 141 1.1E-36 T 13-10-2018 IPR021279 Protein of unknown function DUF2721 ambt_02595 03274ea001d46a6c0df7b4ba3ba69201 298 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 275 296 5.9E-4 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain ambt_04605 966052e8bd624180317dd747b01ef982 179 Pfam PF01609 Transposase DDE domain 15 172 6.3E-17 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_15660 6af6a5764c981a2f18793e388d2a0a74 349 Pfam PF01548 Transposase 12 156 1.3E-17 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 ambt_15660 6af6a5764c981a2f18793e388d2a0a74 349 Pfam PF02371 Transposase IS116/IS110/IS902 family 223 306 6.8E-19 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 ambt_18085 c41ec2f53b7aa317a29fdc593767cdbc 176 Gene3D G3DSA:3.30.420.10 7 171 1.2E-14 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ambt_18085 c41ec2f53b7aa317a29fdc593767cdbc 176 SUPERFAMILY SSF53098 11 163 3.04E-14 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_07180 7128b22ac35cb18a437a94ce268826b3 404 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 324 1.0E-123 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 ambt_07180 7128b22ac35cb18a437a94ce268826b3 404 Gene3D G3DSA:3.30.470.90 75 324 7.4E-94 T 13-10-2018 ambt_07180 7128b22ac35cb18a437a94ce268826b3 404 Gene3D G3DSA:1.10.287.610 4 74 7.7E-25 T 13-10-2018 ambt_07180 7128b22ac35cb18a437a94ce268826b3 404 SUPERFAMILY SSF56091 5 322 4.17E-115 T 13-10-2018 ambt_07180 7128b22ac35cb18a437a94ce268826b3 404 SMART SM00532 7 401 1.8E-145 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 ambt_15695 b09ed206f44b48ca97d33bfc9bb28626 84 SMART SM00360 2 75 2.9E-22 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 ambt_15695 b09ed206f44b48ca97d33bfc9bb28626 84 SUPERFAMILY SSF54928 2 82 1.32E-25 T 13-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 ambt_15695 b09ed206f44b48ca97d33bfc9bb28626 84 Gene3D G3DSA:3.30.70.330 1 84 9.2E-25 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ambt_15695 b09ed206f44b48ca97d33bfc9bb28626 84 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 8.5E-20 T 13-10-2018 IPR000504 RNA recognition motif domain GO:0003676 ambt_03085 fab36ab9da5cff7838f6422126532a6a 207 Gene3D G3DSA:2.60.120.10 36 207 5.1E-54 T 13-10-2018 IPR014710 RmlC-like jelly roll fold ambt_03085 fab36ab9da5cff7838f6422126532a6a 207 SUPERFAMILY SSF51182 36 206 1.78E-55 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily ambt_03085 fab36ab9da5cff7838f6422126532a6a 207 Pfam PF06172 Cupin superfamily (DUF985) 47 185 8.5E-42 T 13-10-2018 IPR009327 Cupin domain of unknown function DUF985 ambt_02150 47571c498b505f987fc16c2f6fc9d296 404 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 40 396 5.1E-95 T 13-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 ambt_02150 47571c498b505f987fc16c2f6fc9d296 404 SUPERFAMILY SSF51556 33 401 2.49E-95 T 13-10-2018 IPR032466 Metal-dependent hydrolase ambt_02150 47571c498b505f987fc16c2f6fc9d296 404 Gene3D G3DSA:3.20.20.140 31 404 2.2E-120 T 13-10-2018 ambt_19395 f85f024588b9d6ac82eebad5a385d28d 212 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 1.1E-91 T 13-10-2018 IPR021342 Protein of unknown function DUF2959 ambt_09330 2b607343423fb0e32a6bf2ed5eb89675 133 Pfam PF09335 SNARE associated Golgi protein 29 130 9.3E-10 T 13-10-2018 IPR032816 SNARE associated Golgi protein ambt_09330 2b607343423fb0e32a6bf2ed5eb89675 133 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 1 108 4.0E-7 T 13-10-2018 IPR020143 Uncharacterised protein family, RP436 ambt_13890 5c65834befc6f43dc13247c4ca3d1dce 287 Pfam PF04333 MlaA lipoprotein 45 234 2.1E-66 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ambt_13890 5c65834befc6f43dc13247c4ca3d1dce 287 PRINTS PR01805 VacJ lipoprotein signature 115 132 2.8E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ambt_13890 5c65834befc6f43dc13247c4ca3d1dce 287 PRINTS PR01805 VacJ lipoprotein signature 64 80 2.8E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ambt_13890 5c65834befc6f43dc13247c4ca3d1dce 287 PRINTS PR01805 VacJ lipoprotein signature 46 59 2.8E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ambt_13890 5c65834befc6f43dc13247c4ca3d1dce 287 PRINTS PR01805 VacJ lipoprotein signature 151 168 2.8E-24 T 13-10-2018 IPR007428 MlaA lipoprotein GO:0016020 ambt_12300 dd12dd36648de367d6c060d2583d0826 1246 Pfam PF12128 Protein of unknown function (DUF3584) 8 1209 0.0 T 13-10-2018 IPR021979 Protein of unknown function DUF3584 ambt_10135 6240d850009ac06279840609ebef089d 448 SUPERFAMILY SSF118215 10 419 2.48E-123 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ambt_10135 6240d850009ac06279840609ebef089d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 345 364 2.2E-43 T 13-10-2018 ambt_10135 6240d850009ac06279840609ebef089d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 208 227 2.2E-43 T 13-10-2018 ambt_10135 6240d850009ac06279840609ebef089d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 243 262 2.2E-43 T 13-10-2018 ambt_10135 6240d850009ac06279840609ebef089d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 2.2E-43 T 13-10-2018 ambt_10135 6240d850009ac06279840609ebef089d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 372 392 2.2E-43 T 13-10-2018 ambt_10135 6240d850009ac06279840609ebef089d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 98 123 2.2E-43 T 13-10-2018 ambt_10135 6240d850009ac06279840609ebef089d 448 PRINTS PR00173 Glutamate-aspartate symporter signature 310 336 2.2E-43 T 13-10-2018 ambt_10135 6240d850009ac06279840609ebef089d 448 Pfam PF00375 Sodium:dicarboxylate symporter family 10 417 7.0E-134 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ambt_10135 6240d850009ac06279840609ebef089d 448 Gene3D G3DSA:1.10.3860.10 1 437 4.0E-142 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ambt_05715 ed029da0db38c173a55124ca8efb1ff5 319 Pfam PF13280 WYL domain 143 215 4.8E-11 T 13-10-2018 IPR026881 WYL domain ambt_05715 ed029da0db38c173a55124ca8efb1ff5 319 PIRSF PIRSF015558 22 309 1.5E-88 T 13-10-2018 IPR016634 WYL domain protein, s026 type ambt_10515 2dde7bab69ba26c2a6c85f0f4e13de6a 370 Pfam PF13439 Glycosyltransferase Family 4 17 177 4.4E-12 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ambt_10515 2dde7bab69ba26c2a6c85f0f4e13de6a 370 SUPERFAMILY SSF53756 7 369 6.8E-54 T 13-10-2018 ambt_10515 2dde7bab69ba26c2a6c85f0f4e13de6a 370 Gene3D G3DSA:3.40.50.2000 3 182 7.9E-16 T 13-10-2018 ambt_10515 2dde7bab69ba26c2a6c85f0f4e13de6a 370 Pfam PF13692 Glycosyl transferases group 1 203 333 7.9E-19 T 13-10-2018 ambt_10515 2dde7bab69ba26c2a6c85f0f4e13de6a 370 Gene3D G3DSA:3.40.50.2000 183 360 2.6E-28 T 13-10-2018 ambt_16290 b1fd276ae6968a5e2fb7c00c956b4b99 384 SUPERFAMILY SSF111369 66 236 1.44E-21 T 13-10-2018 ambt_16290 b1fd276ae6968a5e2fb7c00c956b4b99 384 Gene3D G3DSA:1.10.287.470 110 183 1.5E-56 T 13-10-2018 ambt_16290 b1fd276ae6968a5e2fb7c00c956b4b99 384 Gene3D G3DSA:2.40.50.100 76 222 1.5E-56 T 13-10-2018 ambt_16290 b1fd276ae6968a5e2fb7c00c956b4b99 384 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 75 284 8.7E-17 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ambt_16290 b1fd276ae6968a5e2fb7c00c956b4b99 384 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 66 371 6.7E-61 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 ambt_16290 b1fd276ae6968a5e2fb7c00c956b4b99 384 Gene3D G3DSA:2.40.30.170 64 293 1.5E-56 T 13-10-2018 ambt_16290 b1fd276ae6968a5e2fb7c00c956b4b99 384 Gene3D G3DSA:2.40.420.20 294 369 1.5E-56 T 13-10-2018 ambt_03770 2fc5b4ab52694e0e2481c2e4f32d1ec9 214 Pfam PF10679 Protein of unknown function (DUF2491) 2 211 1.5E-78 T 13-10-2018 IPR019621 Protein of unknown function DUF2491 ambt_01365 ceec182ffb32df052caf93c7138d2c60 384 Pfam PF13795 HupE / UreJ protein 197 356 3.2E-42 T 13-10-2018 IPR032809 Putative HupE/UreJ protein ambt_07275 108a9a916954c8dd6e6bbb361ea10af4 99 Pfam PF11666 Protein of unknown function (DUF2933) 18 67 1.3E-22 T 13-10-2018 IPR021682 Protein of unknown function DUF2933 ambt_02415 af93d0653a9fcf3a039fd0aefa0ce6de 188 Pfam PF03695 Uncharacterised protein family (UPF0149) 11 174 6.3E-42 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 ambt_02415 af93d0653a9fcf3a039fd0aefa0ce6de 188 SUPERFAMILY SSF101327 5 173 9.68E-44 T 13-10-2018 IPR036255 YgfB-like superfamily ambt_02415 af93d0653a9fcf3a039fd0aefa0ce6de 188 Gene3D G3DSA:1.20.120.740 2 188 5.8E-55 T 13-10-2018 ambt_02415 af93d0653a9fcf3a039fd0aefa0ce6de 188 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 12 152 3.3E-16 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 ambt_03145 2d220e7e1614ea110e390c715b15b2aa 114 Pfam PF12514 Protein of unknown function (DUF3718) 38 107 5.5E-23 T 13-10-2018 IPR022193 Protein of unknown function DUF3718 ambt_20935 3d28c8743712d770e53ba9bbabc9c699 242 TIGRFAM TIGR03747 conj_TIGR03747: integrating conjugative element membrane protein, PFL_4697 family 15 241 2.3E-67 T 13-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type ambt_20935 3d28c8743712d770e53ba9bbabc9c699 242 Pfam PF14348 Domain of unknown function (DUF4400) 50 239 1.4E-57 T 13-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type ambt_10125 9a0605a72dac8b33980c24961b46fa16 446 Pfam PF04996 Succinylarginine dihydrolase 3 444 1.0E-225 T 13-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 ambt_10125 9a0605a72dac8b33980c24961b46fa16 446 Gene3D G3DSA:3.75.10.20 1 446 3.1E-205 T 13-10-2018 IPR037031 Succinylarginine dihydrolase superfamily GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 ambt_10125 9a0605a72dac8b33980c24961b46fa16 446 SUPERFAMILY SSF55909 3 445 5.69E-209 T 13-10-2018 ambt_10125 9a0605a72dac8b33980c24961b46fa16 446 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 445 59.702 T 13-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 ambt_10125 9a0605a72dac8b33980c24961b46fa16 446 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 444 4.7E-223 T 13-10-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 ambt_02005 7638532c8dd8e6fa2c515454f8502213 111 Gene3D G3DSA:3.10.180.10 6 110 3.2E-13 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_02005 7638532c8dd8e6fa2c515454f8502213 111 SUPERFAMILY SSF54593 6 110 4.56E-19 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_01640 138811b0761dba7460cc25a102ab283d 134 Pfam PF11026 Protein of unknown function (DUF2721) 6 118 6.8E-32 T 13-10-2018 IPR021279 Protein of unknown function DUF2721 ambt_17080 acedbcff96941ff07e368ba4b334cf7b 474 SUPERFAMILY SSF53756 5 473 2.62E-112 T 13-10-2018 ambt_17080 acedbcff96941ff07e368ba4b334cf7b 474 Gene3D G3DSA:3.40.50.2000 3 470 1.8E-161 T 13-10-2018 ambt_17080 acedbcff96941ff07e368ba4b334cf7b 474 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 2 471 5.5E-156 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 ambt_17080 acedbcff96941ff07e368ba4b334cf7b 474 Gene3D G3DSA:3.40.50.2000 248 456 1.8E-161 T 13-10-2018 ambt_17080 acedbcff96941ff07e368ba4b334cf7b 474 Pfam PF08323 Starch synthase catalytic domain 2 232 9.8E-65 T 13-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 ambt_17080 acedbcff96941ff07e368ba4b334cf7b 474 Pfam PF00534 Glycosyl transferases group 1 292 446 5.6E-14 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 ambt_17080 acedbcff96941ff07e368ba4b334cf7b 474 Hamap MF_00484 Glycogen synthase [glgA]. 1 472 39.836 T 13-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 ambt_01870 48ea5e30f946fcd9a6cf8052294a190e 181 Gene3D G3DSA:3.50.70.10 29 164 2.4E-7 T 13-10-2018 IPR016088 Chalcone isomerase, 3-layer sandwich KEGG: 00941+5.5.1.6|MetaCyc: PWY-2002|MetaCyc: PWY-5059|MetaCyc: PWY-6325|MetaCyc: PWY-6787|MetaCyc: PWY-7397|MetaCyc: PWY-7897 ambt_01870 48ea5e30f946fcd9a6cf8052294a190e 181 Pfam PF16036 Chalcone isomerase-like 30 179 2.2E-16 T 13-10-2018 IPR016087 Chalcone isomerase GO:0016872 ambt_17845 6f9af05a2ed3f79b989cbdf3ad74639a 114 Pfam PF05717 IS66 Orf2 like protein 6 104 7.0E-41 T 13-10-2018 IPR008878 Transposase IS66, Orf2 ambt_17865 6f9af05a2ed3f79b989cbdf3ad74639a 114 Pfam PF05717 IS66 Orf2 like protein 6 104 7.0E-41 T 13-10-2018 IPR008878 Transposase IS66, Orf2 ambt_04990 d1fd7daa085a8d6d7f85cf27f196f6f7 174 Pfam PF04315 Elongation factor P hydroxylase 15 168 3.5E-73 T 13-10-2018 IPR007411 Elongation factor P hydroxylase ambt_08630 e1b68c87f27d81d123dfef49a1aa21cd 384 Pfam PF01548 Transposase 9 157 1.4E-14 T 13-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 ambt_08630 e1b68c87f27d81d123dfef49a1aa21cd 384 Pfam PF02371 Transposase IS116/IS110/IS902 family 227 299 2.7E-20 T 13-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 ambt_20765 572da2dfb08d31840652ed8529492876 178 Pfam PF11198 Protein of unknown function (DUF2857) 30 175 8.9E-26 T 13-10-2018 IPR021364 Protein of unknown function DUF2857 ambt_10260 3b71547cc32c65650982ab88e80bc0fa 551 Pfam PF03961 Flagellar Assembly Protein A 83 544 5.9E-111 T 13-10-2018 IPR005646 Flagellar assembly protein A ambt_16005 ec44eb88693a90a47fa10b08467f03f3 366 Gene3D G3DSA:2.70.70.10 229 365 1.7E-31 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_16005 ec44eb88693a90a47fa10b08467f03f3 366 SUPERFAMILY SSF51261 210 364 8.37E-39 T 13-10-2018 IPR011055 Duplicated hybrid motif ambt_16005 ec44eb88693a90a47fa10b08467f03f3 366 Pfam PF01551 Peptidase family M23 268 361 4.8E-22 T 13-10-2018 IPR016047 Peptidase M23 ambt_00805 715c277c68a85aeadd5841bc0360694f 364 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 2 364 41.903 T 13-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 ambt_00805 715c277c68a85aeadd5841bc0360694f 364 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 8 364 4.6E-164 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ambt_00805 715c277c68a85aeadd5841bc0360694f 364 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 8 364 4.7E-163 T 13-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 ambt_00805 715c277c68a85aeadd5841bc0360694f 364 Gene3D G3DSA:3.40.1350.30 43 187 4.8E-129 T 13-10-2018 ambt_00805 715c277c68a85aeadd5841bc0360694f 364 Gene3D G3DSA:3.40.50.150 11 360 4.8E-129 T 13-10-2018 ambt_00805 715c277c68a85aeadd5841bc0360694f 364 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 297 326 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site ambt_00805 715c277c68a85aeadd5841bc0360694f 364 SUPERFAMILY SSF53335 7 363 5.63E-53 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_07760 04f4450bbf6e913bbe658a2f3ee21823 287 SUPERFAMILY SSF53335 1 263 1.31E-26 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_07760 04f4450bbf6e913bbe658a2f3ee21823 287 Gene3D G3DSA:3.40.50.150 1 283 8.4E-60 T 13-10-2018 ambt_07760 04f4450bbf6e913bbe658a2f3ee21823 287 PIRSF PIRSF018249 1 285 3.4E-66 T 13-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 ambt_07760 04f4450bbf6e913bbe658a2f3ee21823 287 Pfam PF08241 Methyltransferase domain 102 190 1.5E-6 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ambt_02770 ab97ee65e5532b421b98beaec1e7a823 204 SUPERFAMILY SSF82171 28 177 4.71E-9 T 13-10-2018 ambt_02770 ab97ee65e5532b421b98beaec1e7a823 204 Gene3D G3DSA:2.120.10.30 20 195 1.3E-8 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ambt_09830 7bf5c22eeede393c43eb5fbc23d71351 975 Pfam PF00593 TonB dependent receptor 455 974 1.3E-40 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_09830 7bf5c22eeede393c43eb5fbc23d71351 975 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 38 974 2.2E-172 T 13-10-2018 IPR010104 Bacterial TonB-dependent receptor ambt_09830 7bf5c22eeede393c43eb5fbc23d71351 975 SUPERFAMILY SSF56935 41 975 1.37E-80 T 13-10-2018 ambt_09830 7bf5c22eeede393c43eb5fbc23d71351 975 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 158 1.4E-13 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_09830 7bf5c22eeede393c43eb5fbc23d71351 975 Gene3D G3DSA:2.170.130.10 40 161 7.5E-15 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_06450 bad58b5b1904e87abdbd8ce0da3550c3 242 TIGRFAM TIGR02145 Fib_succ_major: fibrobacter succinogenes major paralogous domain 49 241 9.5E-33 T 13-10-2018 IPR011871 Fibrobacter succinogenes major paralogous domain ambt_06450 bad58b5b1904e87abdbd8ce0da3550c3 242 Pfam PF09603 Fibrobacter succinogenes major domain (Fib_succ_major) 56 241 4.1E-44 T 13-10-2018 IPR011871 Fibrobacter succinogenes major paralogous domain ambt_20220 5c3dd75f7370ec195dc7f0fe290aa1ed 609 Pfam PF13387 Domain of unknown function (DUF4105) 111 277 1.1E-49 T 13-10-2018 IPR025178 Domain of unknown function DUF4105 ambt_21000 69f4e29cf30fa87fede658f0be97d744 123 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 30 118 2.4E-22 T 13-10-2018 IPR009241 Toxin HigB-like ambt_19090 78eb45b6d00be3e1b417924dcb9829df 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 121 3.1E-43 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19090 78eb45b6d00be3e1b417924dcb9829df 121 Gene3D G3DSA:3.30.420.100 5 121 1.3E-45 T 13-10-2018 ambt_19090 78eb45b6d00be3e1b417924dcb9829df 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 121 1.8E-42 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ambt_19090 78eb45b6d00be3e1b417924dcb9829df 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 121 26.611 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ambt_19090 78eb45b6d00be3e1b417924dcb9829df 121 SUPERFAMILY SSF53137 7 119 8.5E-53 T 13-10-2018 ambt_04575 b1680632e4714aa1ac3a940360bce535 315 SUPERFAMILY SSF63829 29 277 5.23E-6 T 13-10-2018 ambt_19930 89e8697f0029dfdc0abd9ddcc0a33bd5 393 Gene3D G3DSA:2.40.160.20 28 168 4.2E-8 T 13-10-2018 ambt_19930 89e8697f0029dfdc0abd9ddcc0a33bd5 393 SUPERFAMILY SSF103088 252 383 5.49E-28 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_19930 89e8697f0029dfdc0abd9ddcc0a33bd5 393 Pfam PF00691 OmpA family 281 377 2.4E-18 T 13-10-2018 IPR006665 OmpA-like domain ambt_19930 89e8697f0029dfdc0abd9ddcc0a33bd5 393 PRINTS PR01021 OMPA domain signature 312 327 1.0E-6 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_19930 89e8697f0029dfdc0abd9ddcc0a33bd5 393 PRINTS PR01021 OMPA domain signature 282 304 1.0E-6 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_19930 89e8697f0029dfdc0abd9ddcc0a33bd5 393 PRINTS PR01021 OMPA domain signature 327 343 1.0E-6 T 13-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ambt_19930 89e8697f0029dfdc0abd9ddcc0a33bd5 393 Pfam PF02412 Thrombospondin type 3 repeat 205 225 7.3E-4 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 ambt_19930 89e8697f0029dfdc0abd9ddcc0a33bd5 393 Pfam PF02412 Thrombospondin type 3 repeat 177 195 0.0082 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 ambt_19930 89e8697f0029dfdc0abd9ddcc0a33bd5 393 Pfam PF02412 Thrombospondin type 3 repeat 238 256 0.0057 T 13-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 ambt_19930 89e8697f0029dfdc0abd9ddcc0a33bd5 393 SUPERFAMILY SSF103647 175 258 7.19E-23 T 13-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 ambt_19930 89e8697f0029dfdc0abd9ddcc0a33bd5 393 Gene3D G3DSA:3.30.1330.60 267 386 1.5E-29 T 13-10-2018 IPR036737 OmpA-like domain superfamily ambt_21540 e8f01c27593eea854c6c0adf277e0847 56 SUPERFAMILY SSF46557 3 49 1.16E-16 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ambt_21540 e8f01c27593eea854c6c0adf277e0847 56 Gene3D G3DSA:1.10.287.180 1 51 7.8E-19 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ambt_21540 e8f01c27593eea854c6c0adf277e0847 56 Pfam PF03449 Transcription elongation factor, N-terminal 5 49 7.4E-17 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ambt_13165 ac713191ee710c2a87e0a48bbc28ec1d 146 Pfam PF10975 Protein of unknown function (DUF2802) 77 141 4.2E-21 T 13-10-2018 IPR021244 Protein of unknown function DUF2802 ambt_12105 599c5116a89c53d55fdd2a5a51141d7c 230 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 223 43.677 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 ambt_12105 599c5116a89c53d55fdd2a5a51141d7c 230 TIGRFAM TIGR02796 tolQ: protein TolQ 7 218 8.3E-91 T 13-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 ambt_12105 599c5116a89c53d55fdd2a5a51141d7c 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 205 2.9E-41 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ambt_16060 9b8cee0645d42128cb633eff0bbfd9ed 293 PRINTS PR01008 Flagellar L-ring protein signature 137 149 9.4E-14 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_16060 9b8cee0645d42128cb633eff0bbfd9ed 293 PRINTS PR01008 Flagellar L-ring protein signature 272 286 9.4E-14 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_16060 9b8cee0645d42128cb633eff0bbfd9ed 293 PRINTS PR01008 Flagellar L-ring protein signature 256 270 9.4E-14 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_16060 9b8cee0645d42128cb633eff0bbfd9ed 293 PRINTS PR01008 Flagellar L-ring protein signature 209 224 9.4E-14 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_16060 9b8cee0645d42128cb633eff0bbfd9ed 293 PRINTS PR01008 Flagellar L-ring protein signature 235 251 9.4E-14 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_16060 9b8cee0645d42128cb633eff0bbfd9ed 293 Pfam PF02107 Flagellar L-ring protein 117 290 2.9E-45 T 13-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ambt_02050 417514a94f5a1120fef5cd4d813d1e28 104 Pfam PF09413 Putative prokaryotic signal transducing protein 2 67 4.0E-10 T 13-10-2018 IPR018551 Domain of unknown function DUF2007 ambt_02050 417514a94f5a1120fef5cd4d813d1e28 104 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 80 99 - T 13-10-2018 IPR001876 Zinc finger, RanBP2-type ambt_02750 364640556a91ffd00763587f389629ea 142 Gene3D G3DSA:1.10.287.700 46 141 4.4E-6 T 13-10-2018 ambt_04820 31252b00b9b4ad540b4d726fc73586cf 130 SUPERFAMILY SSF54593 1 128 2.68E-16 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_04820 31252b00b9b4ad540b4d726fc73586cf 130 Gene3D G3DSA:3.10.180.10 6 129 4.5E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_21585 589f98f733556558aa3d95d2ea090e50 109 SMART SM00530 10 69 1.1E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_21585 589f98f733556558aa3d95d2ea090e50 109 Gene3D G3DSA:1.10.260.40 7 105 3.4E-23 T 13-10-2018 ambt_21585 589f98f733556558aa3d95d2ea090e50 109 SUPERFAMILY SSF47413 6 76 3.1E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ambt_21585 589f98f733556558aa3d95d2ea090e50 109 Pfam PF12844 Helix-turn-helix domain 9 70 4.0E-9 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ambt_18180 bbffdd21480bc6c20b8435cfe8cd1f5f 166 SUPERFAMILY SSF53474 1 145 1.08E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_18180 bbffdd21480bc6c20b8435cfe8cd1f5f 166 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 134 3.8E-9 T 13-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA ambt_18180 bbffdd21480bc6c20b8435cfe8cd1f5f 166 Gene3D G3DSA:3.40.50.1820 1 163 5.0E-39 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_21620 7d7cac845a681915817706ca2ae9fdbb 87 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 45 61 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ambt_21620 7d7cac845a681915817706ca2ae9fdbb 87 SUPERFAMILY SSF54534 6 81 2.49E-18 T 13-10-2018 ambt_21620 7d7cac845a681915817706ca2ae9fdbb 87 Gene3D G3DSA:3.10.50.30 3 83 5.9E-28 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 ambt_21620 7d7cac845a681915817706ca2ae9fdbb 87 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 7 81 7.8E-20 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ambt_15305 952e8a3a5accee39c72167d020c0cc7a 131 Pfam PF06853 Protein of unknown function (DUF1249) 12 122 6.1E-41 T 13-10-2018 IPR009659 Protein of unknown function DUF1249 ambt_15995 76251c6e2f6e9f19b07fe4019fee2bec 280 SUPERFAMILY SSF88713 31 244 5.11E-65 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ambt_15995 76251c6e2f6e9f19b07fe4019fee2bec 280 Gene3D G3DSA:3.20.20.370 19 254 1.8E-76 T 13-10-2018 ambt_15995 76251c6e2f6e9f19b07fe4019fee2bec 280 Pfam PF04748 Divergent polysaccharide deacetylase 36 244 1.2E-72 T 13-10-2018 IPR006837 Divergent polysaccharide deacetylase ambt_02555 cf3c9592cf14135ef982f4b88b3a5b37 66 Gene3D G3DSA:3.20.20.30 1 66 1.7E-10 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ambt_08425 302b02b7272dcabd092a0c3413aa287f 129 Pfam PF02635 DsrE/DsrF-like family 4 129 1.0E-22 T 13-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein ambt_08425 302b02b7272dcabd092a0c3413aa287f 129 Gene3D G3DSA:3.40.1260.10 1 129 5.2E-46 T 13-10-2018 IPR027396 DsrEFH-like ambt_08425 302b02b7272dcabd092a0c3413aa287f 129 SUPERFAMILY SSF75169 1 129 1.43E-31 T 13-10-2018 IPR027396 DsrEFH-like ambt_08425 302b02b7272dcabd092a0c3413aa287f 129 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 129 2.2E-42 T 13-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 ambt_17105 34744673c2ba7ab7db50ae0d3b5af43a 443 Pfam PF01523 Putative modulator of DNA gyrase 28 320 3.6E-56 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 ambt_17105 34744673c2ba7ab7db50ae0d3b5af43a 443 SUPERFAMILY SSF111283 9 442 6.02E-124 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 ambt_17105 34744673c2ba7ab7db50ae0d3b5af43a 443 Gene3D G3DSA:3.30.2290.10 2 229 9.0E-85 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal ambt_10410 c80ee7d923a8f517a09f3148f274bbdc 539 Pfam PF10972 Peptidoglycan-binding protein, CsiV 10 531 2.7E-51 T 13-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV ambt_21705 b9246ae6a7ccb6ff682ba7a0608142f2 311 Gene3D G3DSA:1.10.357.140 32 201 1.5E-19 T 13-10-2018 ambt_21705 b9246ae6a7ccb6ff682ba7a0608142f2 311 Pfam PF01040 UbiA prenyltransferase family 41 289 2.7E-60 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 ambt_21705 b9246ae6a7ccb6ff682ba7a0608142f2 311 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 27 305 3.4E-98 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ambt_21705 b9246ae6a7ccb6ff682ba7a0608142f2 311 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 80 102 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site ambt_21705 b9246ae6a7ccb6ff682ba7a0608142f2 311 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 25 306 19.364 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ambt_13025 eaa7eaf4dec36b540268840e13a0af3c 227 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 217 9.1E-93 T 13-10-2018 IPR014319 Phage shock protein, PspA ambt_13025 eaa7eaf4dec36b540268840e13a0af3c 227 Pfam PF04012 PspA/IM30 family 2 215 1.6E-45 T 13-10-2018 IPR007157 PspA/IM30 ambt_11720 53a0d0c5c566268c284a0b46b4f54100 232 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ambt_11720 53a0d0c5c566268c284a0b46b4f54100 232 Gene3D G3DSA:3.40.50.300 1 231 3.6E-68 T 13-10-2018 ambt_11720 53a0d0c5c566268c284a0b46b4f54100 232 Pfam PF00005 ABC transporter 21 167 1.3E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ambt_11720 53a0d0c5c566268c284a0b46b4f54100 232 SUPERFAMILY SSF52540 1 223 1.27E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_11720 53a0d0c5c566268c284a0b46b4f54100 232 SMART SM00382 30 216 7.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain ambt_19830 3a33729f34e3e3e0c22117d608c5ef6a 137 Pfam PF13430 Domain of unknown function (DUF4112) 11 110 4.9E-33 T 13-10-2018 IPR025187 Protein of unknown function DUF4112 ambt_00720 2d7237d5943069d0bcf91fe8d76f5bd4 66 Pfam PF04024 PspC domain 7 65 1.6E-15 T 13-10-2018 IPR007168 Phage shock protein, PspC, N-terminal ambt_09600 cc4323369b03e3aeecd3cf347f10ffb7 209 Pfam PF07681 DoxX 21 105 1.9E-22 T 13-10-2018 IPR032808 DoxX family ambt_06180 49184292975ada60e5dcf515b273f5bc 168 Pfam PF13302 Acetyltransferase (GNAT) domain 61 145 8.1E-7 T 13-10-2018 IPR000182 GNAT domain ambt_06180 49184292975ada60e5dcf515b273f5bc 168 Gene3D G3DSA:3.40.630.30 8 145 3.1E-17 T 13-10-2018 ambt_06180 49184292975ada60e5dcf515b273f5bc 168 SUPERFAMILY SSF55729 25 151 2.13E-15 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_20445 90cb2760634327bcc84f523e726ba613 340 Gene3D G3DSA:3.40.50.2300 56 309 5.9E-36 T 13-10-2018 ambt_20445 90cb2760634327bcc84f523e726ba613 340 Pfam PF04392 ABC transporter substrate binding protein 40 336 2.4E-20 T 13-10-2018 IPR007487 ABC transporter, substrate-binding protein ambt_20445 90cb2760634327bcc84f523e726ba613 340 Gene3D G3DSA:3.40.50.2300 143 331 5.9E-36 T 13-10-2018 ambt_19455 db225871677972cdeee635b89a6fbcec 193 Gene3D G3DSA:1.20.1590.10 2 192 6.4E-63 T 13-10-2018 IPR023381 YP001051499.1-like domain superfamily ambt_19455 db225871677972cdeee635b89a6fbcec 193 Pfam PF04222 Protein of unknown function (DUF416) 8 191 2.4E-61 T 13-10-2018 IPR007338 Protein of unknown function DUF416 ambt_09520 fdfbc2c5c319dbf9f37c20d917964cb4 173 Gene3D G3DSA:3.30.160.150 17 170 1.0E-49 T 13-10-2018 ambt_09520 fdfbc2c5c319dbf9f37c20d917964cb4 173 Pfam PF04390 Lipopolysaccharide-assembly 41 162 5.4E-13 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 ambt_09520 fdfbc2c5c319dbf9f37c20d917964cb4 173 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 5 167 22.676 T 13-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 ambt_18735 22ae8c2750650b8b4bc6b58090fc99fe 703 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 38 695 1.5E-234 T 13-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH ambt_19995 dd037620daebc0da3bd6b2035253925b 95 Pfam PF07130 YebG protein 1 74 2.6E-29 T 13-10-2018 IPR009813 Uncharacterised protein family YebG ambt_19995 dd037620daebc0da3bd6b2035253925b 95 Gene3D G3DSA:1.10.10.710 21 88 2.3E-14 T 13-10-2018 IPR038627 YebG-like superfamily ambt_01085 09bb6ad9794d3c6ea9a21fa50bf4bd21 123 Gene3D G3DSA:3.40.50.1820 3 123 5.0E-18 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_01085 09bb6ad9794d3c6ea9a21fa50bf4bd21 123 SUPERFAMILY SSF53474 7 123 1.68E-17 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_17925 089dbbc2d21852fd45aeca7bc9ee8215 232 Gene3D G3DSA:3.90.850.10 2 232 6.5E-83 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_17925 089dbbc2d21852fd45aeca7bc9ee8215 232 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 231 1.1E-54 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ambt_17925 089dbbc2d21852fd45aeca7bc9ee8215 232 SUPERFAMILY SSF56529 16 231 3.79E-69 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ambt_18170 964717c06314c5c090a211a5c0b89a8a 322 Pfam PF00850 Histone deacetylase domain 20 319 5.3E-80 T 13-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ambt_18170 964717c06314c5c090a211a5c0b89a8a 322 Gene3D G3DSA:3.40.800.20 1 321 2.6E-106 T 13-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ambt_18170 964717c06314c5c090a211a5c0b89a8a 322 PRINTS PR01270 Histone deacetylase superfamily signature 249 259 5.5E-16 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ambt_18170 964717c06314c5c090a211a5c0b89a8a 322 PRINTS PR01270 Histone deacetylase superfamily signature 172 187 5.5E-16 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ambt_18170 964717c06314c5c090a211a5c0b89a8a 322 PRINTS PR01270 Histone deacetylase superfamily signature 138 161 5.5E-16 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ambt_18170 964717c06314c5c090a211a5c0b89a8a 322 SUPERFAMILY SSF52768 9 320 3.64E-90 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily ambt_04795 b61e20218a0bdc32ae8313a5b2f1732e 175 Pfam PF02600 Disulfide bond formation protein DsbB 15 163 3.4E-42 T 13-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 ambt_04795 b61e20218a0bdc32ae8313a5b2f1732e 175 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 10 171 20.439 T 13-10-2018 IPR022920 Disulphide bond formation protein DsbB ambt_04795 b61e20218a0bdc32ae8313a5b2f1732e 175 SUPERFAMILY SSF158442 18 165 2.62E-42 T 13-10-2018 IPR023380 DsbB-like superfamily ambt_04795 b61e20218a0bdc32ae8313a5b2f1732e 175 Gene3D G3DSA:1.20.1550.10 4 174 3.2E-51 T 13-10-2018 IPR023380 DsbB-like superfamily ambt_10370 895f67f195b9fb5747260b53198ed7fe 134 Pfam PF11042 Protein of unknown function (DUF2750) 30 127 8.0E-23 T 13-10-2018 IPR021284 Protein of unknown function DUF2750 ambt_14725 26cafa078c843a795652fe2b693dc42a 214 SUPERFAMILY SSF48452 60 179 1.62E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_14725 26cafa078c843a795652fe2b693dc42a 214 Gene3D G3DSA:1.25.40.10 90 202 1.1E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_17120 cf230e42da8a83753609a9cb4f473dbd 480 Pfam PF01523 Putative modulator of DNA gyrase 34 331 5.2E-68 T 13-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 ambt_17120 cf230e42da8a83753609a9cb4f473dbd 480 Gene3D G3DSA:3.30.2290.10 15 235 7.3E-14 T 13-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal ambt_17120 cf230e42da8a83753609a9cb4f473dbd 480 SUPERFAMILY SSF111283 20 479 4.71E-129 T 13-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 ambt_17120 cf230e42da8a83753609a9cb4f473dbd 480 PIRSF PIRSF004919 15 480 1.9E-144 T 13-10-2018 IPR025502 TldD ambt_10775 b9b3ead3c20311820b0d62ea616b5616 457 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 356 376 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ambt_10775 b9b3ead3c20311820b0d62ea616b5616 457 Pfam PF00860 Permease family 22 407 5.7E-84 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ambt_10775 b9b3ead3c20311820b0d62ea616b5616 457 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 16 437 2.1E-103 T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ambt_08585 29dd3457c2ebdfc476a424ddabedf9fb 90 Gene3D G3DSA:1.10.1220.10 1 49 1.4E-30 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 ambt_08585 29dd3457c2ebdfc476a424ddabedf9fb 90 SUPERFAMILY SSF47598 6 82 5.63E-17 T 13-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 ambt_08585 29dd3457c2ebdfc476a424ddabedf9fb 90 Gene3D G3DSA:1.20.890.30 50 90 2.9E-20 T 13-10-2018 ambt_08585 29dd3457c2ebdfc476a424ddabedf9fb 90 Pfam PF08681 Protein of unknown function (DUF1778) 7 86 1.4E-21 T 13-10-2018 IPR014795 Vibrio phage ICP1, Orf50 ambt_09385 f861eea477c1dee92264f6e833db51e7 168 Pfam PF00583 Acetyltransferase (GNAT) family 31 129 8.6E-11 T 13-10-2018 IPR000182 GNAT domain ambt_09385 f861eea477c1dee92264f6e833db51e7 168 SUPERFAMILY SSF55729 1 151 3.43E-23 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_09385 f861eea477c1dee92264f6e833db51e7 168 Gene3D G3DSA:3.40.630.30 1 156 2.0E-38 T 13-10-2018 ambt_09910 0ea815d206c8e373920b71589929509a 169 Pfam PF06271 RDD family 23 150 3.2E-28 T 13-10-2018 IPR010432 RDD ambt_03820 e735dea434e5819e9deb01adcf1be44c 650 Gene3D G3DSA:2.170.130.10 48 165 3.2E-27 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_03820 e735dea434e5819e9deb01adcf1be44c 650 Pfam PF00593 TonB dependent receptor 233 626 1.6E-23 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_03820 e735dea434e5819e9deb01adcf1be44c 650 Gene3D G3DSA:2.40.170.20 166 627 7.2E-34 T 13-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ambt_03820 e735dea434e5819e9deb01adcf1be44c 650 SUPERFAMILY SSF56935 46 646 6.41E-77 T 13-10-2018 ambt_03820 e735dea434e5819e9deb01adcf1be44c 650 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 158 1.4E-18 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_08960 1b89bc5baf01cb07c6681453e2f68e4a 407 SUPERFAMILY SSF53448 38 404 7.87E-93 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_08960 1b89bc5baf01cb07c6681453e2f68e4a 407 Gene3D G3DSA:3.90.550.10 104 325 1.3E-40 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_18960 d530510e6476a5f1ec6b187700532b20 684 SUPERFAMILY SSF51161 80 203 1.52E-19 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily ambt_18960 d530510e6476a5f1ec6b187700532b20 684 Gene3D G3DSA:2.160.10.10 2 218 2.8E-40 T 13-10-2018 ambt_01385 3b730f53c55c545b6f71a9ffc5efc0f5 233 Pfam PF10099 Anti-sigma-K factor rskA 62 225 2.1E-24 T 13-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 ambt_11010 3b6dd453f17f788a2ad7f84fbfaf699a 121 Gene3D G3DSA:3.10.180.10 2 120 7.0E-25 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_11010 3b6dd453f17f788a2ad7f84fbfaf699a 121 SUPERFAMILY SSF54593 5 117 1.1E-17 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_10395 271050c7a283f87d71a6c793a791a2e7 404 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 404 8.3E-117 T 13-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 ambt_10395 271050c7a283f87d71a6c793a791a2e7 404 Pfam PF02687 FtsX-like permease family 297 397 1.5E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ambt_10395 271050c7a283f87d71a6c793a791a2e7 404 Pfam PF12704 MacB-like periplasmic core domain 35 209 3.2E-11 T 13-10-2018 IPR025857 MacB-like periplasmic core domain ambt_22075 c5f96b2523907b3381a53149b9637fb4 547 Gene3D G3DSA:3.50.50.60 6 519 1.0E-180 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_22075 c5f96b2523907b3381a53149b9637fb4 547 Pfam PF04820 Tryptophan halogenase 9 477 6.2E-115 T 13-10-2018 IPR006905 Flavin-dependent halogenase ambt_22075 c5f96b2523907b3381a53149b9637fb4 547 SUPERFAMILY SSF51905 7 452 2.41E-26 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_22075 c5f96b2523907b3381a53149b9637fb4 547 PIRSF PIRSF011396 1 525 3.5E-160 T 13-10-2018 IPR033856 Flavin-dependent tryptophan halogenase ambt_09845 01c69717c86a195adb52c2e59067b011 310 Gene3D G3DSA:1.20.1530.20 154 308 2.6E-8 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily ambt_09845 01c69717c86a195adb52c2e59067b011 310 Pfam PF03547 Membrane transport protein 163 299 1.4E-9 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ambt_07620 42048c77cb0e79f6a9f283e92e1cf456 528 PIRSF PIRSF011396 24 522 5.3E-199 T 13-10-2018 IPR033856 Flavin-dependent tryptophan halogenase ambt_07620 42048c77cb0e79f6a9f283e92e1cf456 528 SUPERFAMILY SSF51905 28 445 4.88E-29 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_07620 42048c77cb0e79f6a9f283e92e1cf456 528 Pfam PF04820 Tryptophan halogenase 31 484 5.3E-185 T 13-10-2018 IPR006905 Flavin-dependent halogenase ambt_07620 42048c77cb0e79f6a9f283e92e1cf456 528 Gene3D G3DSA:3.50.50.60 29 518 4.9E-183 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_06110 80b98d85774ba859a05809ce7cfa853c 821 Gene3D G3DSA:3.40.390.10 361 496 1.4E-5 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 ambt_06110 80b98d85774ba859a05809ce7cfa853c 821 Pfam PF17148 Domain of unknown function (DUF5117) 102 292 6.7E-34 T 13-10-2018 IPR033413 Domain of unknown function DUF5117 ambt_06110 80b98d85774ba859a05809ce7cfa853c 821 Pfam PF16313 Met-zincin 421 731 8.1E-62 T 13-10-2018 IPR032534 Domain of unknown function DUF4953 ambt_06110 80b98d85774ba859a05809ce7cfa853c 821 SUPERFAMILY SSF55486 296 497 9.87E-24 T 13-10-2018 ambt_14110 ddcdd2da44e3351982e6e02a887d3902 265 TIGRFAM TIGR04052 AZL_007920_fam: AZL_007920/MXAN_0976 family protein 61 255 5.5E-36 T 13-10-2018 IPR023977 Conserved hypotheical protein CHP04052 ambt_19575 27ad8fd60d30b573f6c030bd215b31cc 411 Pfam PF03773 Predicted permease 7 348 7.0E-46 T 13-10-2018 IPR005524 Predicted permease DUF318 ambt_08235 07cd23aa5b5fa1d447b6c1a07cd8245e 201 SUPERFAMILY SSF46626 18 197 5.27E-31 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_08235 07cd23aa5b5fa1d447b6c1a07cd8245e 201 Gene3D G3DSA:1.10.760.10 42 201 3.1E-75 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_08235 07cd23aa5b5fa1d447b6c1a07cd8245e 201 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 5 181 1.3E-83 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO ambt_08235 07cd23aa5b5fa1d447b6c1a07cd8245e 201 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 5 181 6.3E-83 T 13-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO ambt_12960 fbf548830a569450ccdbc3d782e5f854 373 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 258 359 2.6E-14 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ambt_12960 fbf548830a569450ccdbc3d782e5f854 373 Gene3D G3DSA:2.60.120.620 143 359 7.8E-43 T 13-10-2018 ambt_12960 fbf548830a569450ccdbc3d782e5f854 373 SMART SM00702 176 359 2.2E-25 T 13-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 ambt_15630 b9c0a4d3935ed91af04288d8970f69a6 92 SUPERFAMILY SSF116922 19 89 1.96E-5 T 13-10-2018 IPR023162 Apc36109-like domain superfamily ambt_16165 2486a10fafa94b6bf4a768bb400efa93 176 Gene3D G3DSA:2.30.30.830 76 168 2.0E-23 T 13-10-2018 ambt_16165 2486a10fafa94b6bf4a768bb400efa93 176 Pfam PF04351 Pilus assembly protein, PilP 22 166 4.9E-42 T 13-10-2018 IPR007446 Pilus assembly protein PilP ambt_16165 2486a10fafa94b6bf4a768bb400efa93 176 PIRSF PIRSF016481 1 172 3.4E-34 T 13-10-2018 IPR007446 Pilus assembly protein PilP ambt_08360 3434f779fa7b9b26719d2d2a8e839d3b 488 Pfam PF11840 Protein of unknown function (DUF3360) 3 483 4.0E-248 T 13-10-2018 IPR021794 Protein of unknown function DUF3360 ambt_07955 f2f837f8611d4a5651ca27e5d5168b4f 463 Pfam PF02646 RmuC family 154 450 5.1E-106 T 13-10-2018 IPR003798 DNA recombination RmuC ambt_21520 be0909b328ff7c6c3adc77bfb65d1096 86 Hamap MF_00715 Protein SlyX [slyX]. 19 86 16.064 T 13-10-2018 IPR007236 SlyX ambt_21520 be0909b328ff7c6c3adc77bfb65d1096 86 Pfam PF04102 SlyX 21 86 2.0E-23 T 13-10-2018 IPR007236 SlyX ambt_04910 d2f01b5b7ef32ba41b7da8ebac488666 501 Gene3D G3DSA:3.40.50.12780 2 367 2.6E-62 T 13-10-2018 ambt_04910 d2f01b5b7ef32ba41b7da8ebac488666 501 Pfam PF00501 AMP-binding enzyme 12 373 5.8E-54 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ambt_04910 d2f01b5b7ef32ba41b7da8ebac488666 501 SUPERFAMILY SSF56801 3 480 4.58E-76 T 13-10-2018 ambt_04910 d2f01b5b7ef32ba41b7da8ebac488666 501 ProSitePatterns PS00455 Putative AMP-binding domain signature. 139 150 - T 13-10-2018 IPR020845 AMP-binding, conserved site ambt_04910 d2f01b5b7ef32ba41b7da8ebac488666 501 Gene3D G3DSA:3.30.300.30 371 475 6.9E-6 T 13-10-2018 ambt_17420 dbeb27816522bac33e5612707eb3cd5e 233 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 130 220 1.9E-11 T 13-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ambt_17420 dbeb27816522bac33e5612707eb3cd5e 233 SMART SM00702 3 221 1.5E-4 T 13-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 ambt_07305 e27564a969a1a21e6195a88cf52e0e2c 169 Gene3D G3DSA:1.20.1260.10 83 165 1.3E-10 T 13-10-2018 IPR012347 Ferritin-like ambt_07305 e27564a969a1a21e6195a88cf52e0e2c 169 Pfam PF03713 Domain of unknown function (DUF305) 92 142 5.8E-10 T 13-10-2018 IPR005183 Domain of unknown function DUF305 ambt_14940 eabd388f27ddfd9bbf8a88e45571f601 303 Pfam PF04381 Putative exonuclease, RdgC 1 297 3.7E-95 T 13-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 ambt_11035 6cc7081e8ff6917cc2c2bce5e42872ec 232 Gene3D G3DSA:3.30.1380.10 3 194 3.5E-31 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ambt_11035 6cc7081e8ff6917cc2c2bce5e42872ec 232 SUPERFAMILY SSF55166 18 175 9.81E-18 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ambt_11035 6cc7081e8ff6917cc2c2bce5e42872ec 232 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 21 177 7.7E-31 T 13-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 ambt_05920 0557994f034b71d6074cc1f16c0b95de 69 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 12 59 20.195 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 ambt_05920 0557994f034b71d6074cc1f16c0b95de 69 PIRSF PIRSF036466 12 66 8.3E-21 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 ambt_05920 0557994f034b71d6074cc1f16c0b95de 69 Pfam PF07043 Protein of unknown function (DUF1328) 17 55 5.0E-14 T 13-10-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 ambt_03575 8d5902053a919158885c71bab17400a3 457 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 19 265 7.7E-41 T 13-10-2018 IPR019127 Exosortase ambt_03575 8d5902053a919158885c71bab17400a3 457 TIGRFAM TIGR02602 8TM_EpsH: exosortase 37 267 1.3E-54 T 13-10-2018 IPR013426 Exosortase, EpsH-like ambt_03575 8d5902053a919158885c71bab17400a3 457 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 174 264 7.2E-18 T 13-10-2018 IPR026392 Exosortase/Archaeosortase domain ambt_01160 8878e23b01fd57d3ae238f23c9d4a376 251 Gene3D G3DSA:1.20.910.10 2 251 4.2E-70 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ambt_01160 8878e23b01fd57d3ae238f23c9d4a376 251 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 7 237 5.7E-107 T 13-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 ambt_01160 8878e23b01fd57d3ae238f23c9d4a376 251 SUPERFAMILY SSF48613 3 249 6.67E-72 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ambt_01160 8878e23b01fd57d3ae238f23c9d4a376 251 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 251 125.678 T 13-10-2018 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 ambt_01160 8878e23b01fd57d3ae238f23c9d4a376 251 Pfam PF03070 TENA/THI-4/PQQC family 13 224 1.3E-57 T 13-10-2018 IPR004305 Thiaminase-2/PQQC ambt_01065 f51a4559a4b2e5a6467d22992c2c8bca 106 SUPERFAMILY SSF46689 2 72 2.87E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ambt_01065 f51a4559a4b2e5a6467d22992c2c8bca 106 Pfam PF01527 Transposase 3 69 3.9E-16 T 13-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ambt_01065 f51a4559a4b2e5a6467d22992c2c8bca 106 Gene3D G3DSA:1.10.10.60 6 85 6.0E-13 T 13-10-2018 ambt_20085 4955212c4604e2a98f70f2a53704530d 333 Pfam PF03601 Conserved hypothetical protein 698 17 314 2.1E-66 T 13-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 ambt_15125 00cab35c4d731a85ce9131c19c8e32dc 426 Pfam PF13372 Alginate export 76 281 1.4E-13 T 13-10-2018 IPR025388 Alginate export domain ambt_05725 9d81cd1f32289c02dac6400494a3b6b3 195 Pfam PF09347 Domain of unknown function (DUF1989) 4 168 4.7E-49 T 13-10-2018 IPR018959 Protein of unknown function DUF1989 ambt_10625 d0e4613791786fcab743cad27d714dd7 232 Gene3D G3DSA:3.10.620.30 30 222 7.4E-73 T 13-10-2018 ambt_10625 d0e4613791786fcab743cad27d714dd7 232 SUPERFAMILY SSF54001 69 193 3.92E-6 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ambt_10625 d0e4613791786fcab743cad27d714dd7 232 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 71 177 1.1E-13 T 13-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted ambt_18980 9d83cfe41895785c45ad101e036dc7ba 116 Pfam PF05717 IS66 Orf2 like protein 9 103 4.0E-36 T 13-10-2018 IPR008878 Transposase IS66, Orf2 ambt_20215 9b8d24c3ddaaccacef479eb73ef4ff82 256 Pfam PF01925 Sulfite exporter TauE/SafE 23 247 1.5E-15 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ambt_06400 9525c5264a98aeb97805329efa00cbb1 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 128 141 5.9E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_06400 9525c5264a98aeb97805329efa00cbb1 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 98 5.9E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_06400 9525c5264a98aeb97805329efa00cbb1 306 PRINTS PR00111 Alpha/beta hydrolase fold signature 142 155 5.9E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_06400 9525c5264a98aeb97805329efa00cbb1 306 SUPERFAMILY SSF53474 38 301 8.4E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_06400 9525c5264a98aeb97805329efa00cbb1 306 Gene3D G3DSA:3.40.50.1820 43 304 2.7E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_06400 9525c5264a98aeb97805329efa00cbb1 306 Pfam PF00561 alpha/beta hydrolase fold 61 166 1.5E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_00885 62010abfaeec2af832a7c67406722301 385 SUPERFAMILY SSF55073 243 349 2.75E-14 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_00885 62010abfaeec2af832a7c67406722301 385 Pfam PF00990 Diguanylate cyclase, GGDEF domain 233 347 5.7E-13 T 13-10-2018 IPR000160 GGDEF domain ambt_00885 62010abfaeec2af832a7c67406722301 385 Gene3D G3DSA:3.30.70.270 227 362 2.7E-16 T 13-10-2018 ambt_00885 62010abfaeec2af832a7c67406722301 385 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 348 9.9E-12 T 13-10-2018 IPR000160 GGDEF domain ambt_00885 62010abfaeec2af832a7c67406722301 385 SMART SM00267 222 366 0.0021 T 13-10-2018 IPR000160 GGDEF domain ambt_08905 87cc37602b46b47335a77d04a5d99f8e 457 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 29 361 1.1E-61 T 13-10-2018 IPR018642 Protein of unknown function DUF2066 ambt_10420 e3e04d6822304154fe43e620bccd7c1f 463 Pfam PF00939 Sodium:sulfate symporter transmembrane region 25 454 4.7E-61 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 ambt_10420 e3e04d6822304154fe43e620bccd7c1f 463 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 412 428 - T 13-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 ambt_10420 e3e04d6822304154fe43e620bccd7c1f 463 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 28 456 1.8E-76 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 ambt_21370 28c9f9c8445fef2c2bab87d27027a198 131 SUPERFAMILY SSF55174 9 104 3.89E-27 T 13-10-2018 ambt_21370 28c9f9c8445fef2c2bab87d27027a198 131 Gene3D G3DSA:3.10.290.10 3 109 3.7E-36 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ambt_21370 28c9f9c8445fef2c2bab87d27027a198 131 Pfam PF01479 S4 domain 10 56 4.7E-13 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_21370 28c9f9c8445fef2c2bab87d27027a198 131 SMART SM00363 10 77 1.6E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ambt_21370 28c9f9c8445fef2c2bab87d27027a198 131 PIRSF PIRSF016821 7 131 4.9E-40 T 13-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 ambt_06725 f96d3e2be97192f792e06e9ec19b243e 271 Pfam PF00561 alpha/beta hydrolase fold 25 259 5.6E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ambt_06725 f96d3e2be97192f792e06e9ec19b243e 271 SUPERFAMILY SSF53474 16 270 1.75E-43 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_06725 f96d3e2be97192f792e06e9ec19b243e 271 Gene3D G3DSA:3.40.50.1820 3 271 3.8E-67 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_04425 9c10c0111b04f6c391d9154cd5877cd0 421 SUPERFAMILY SSF51905 3 415 4.34E-46 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_04425 9c10c0111b04f6c391d9154cd5877cd0 421 Pfam PF01593 Flavin containing amine oxidoreductase 12 281 2.3E-15 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ambt_04425 9c10c0111b04f6c391d9154cd5877cd0 421 Gene3D G3DSA:3.50.50.60 1 275 6.2E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ambt_08790 2c509503f028160d72c61416539e0d81 176 SUPERFAMILY SSF51316 56 149 1.36E-18 T 13-10-2018 IPR011057 Mss4-like superfamily ambt_08790 2c509503f028160d72c61416539e0d81 176 Gene3D G3DSA:2.170.150.70 59 173 1.1E-20 T 13-10-2018 ambt_18350 983f08256584bbc9eda5cbd1b85409fc 390 Pfam PF07219 HemY protein N-terminus 29 133 1.3E-23 T 13-10-2018 IPR010817 HemY, N-terminal ambt_18350 983f08256584bbc9eda5cbd1b85409fc 390 SUPERFAMILY SSF48452 91 359 2.89E-9 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_18350 983f08256584bbc9eda5cbd1b85409fc 390 Gene3D G3DSA:1.25.40.10 88 228 2.2E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_18350 983f08256584bbc9eda5cbd1b85409fc 390 Gene3D G3DSA:1.25.40.10 256 389 2.4E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ambt_18350 983f08256584bbc9eda5cbd1b85409fc 390 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 7 385 1.3E-74 T 13-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 ambt_06220 d6bd1ae403edfcacfd00441f5e0b2d6f 98 Gene3D G3DSA:3.30.2310.20 1 91 4.1E-9 T 13-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily ambt_06220 d6bd1ae403edfcacfd00441f5e0b2d6f 98 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 90 1.4E-8 T 13-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ambt_16055 8a6011cd3e142b0559827c2e5bda3b21 396 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 314 388 8.1E-14 T 13-10-2018 IPR032388 Flagellar assembly protein T, C-terminal ambt_16055 8a6011cd3e142b0559827c2e5bda3b21 396 Pfam PF16539 Flagellar assembly protein T, middle domain 112 271 1.3E-42 T 13-10-2018 IPR032386 Flagellar assembly protein T, middle domain ambt_16055 8a6011cd3e142b0559827c2e5bda3b21 396 Gene3D G3DSA:3.40.50.10610 112 305 1.7E-49 T 13-10-2018 ambt_16055 8a6011cd3e142b0559827c2e5bda3b21 396 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 109 2.8E-16 T 13-10-2018 IPR032370 Flagellar assembly protein T, N-terminal ambt_18250 5de73bb88a9acc2c4cc8836594526f68 276 Gene3D G3DSA:1.10.10.10 110 230 7.3E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_18250 5de73bb88a9acc2c4cc8836594526f68 276 SUPERFAMILY SSF46785 135 210 9.45E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ambt_15820 4961f71c31cbb0a19a8542e9eb14f3ee 109 Pfam PF06127 Protein of unknown function (DUF962) 11 104 8.4E-37 T 13-10-2018 IPR009305 Protein of unknown function DUF962 ambt_00625 9b4aafae4e724d6993c4dfa3402218d3 382 SUPERFAMILY SSF50956 59 304 3.92E-8 T 13-10-2018 ambt_07350 d7d5e50be432f047fcc7d0df49db7e2b 303 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 292 3.1E-65 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ambt_07350 d7d5e50be432f047fcc7d0df49db7e2b 303 SUPERFAMILY SSF161111 18 214 1.44E-47 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ambt_07350 d7d5e50be432f047fcc7d0df49db7e2b 303 Gene3D G3DSA:1.20.1510.10 20 212 3.3E-39 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ambt_07350 d7d5e50be432f047fcc7d0df49db7e2b 303 Pfam PF01545 Cation efflux family 27 209 1.9E-39 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ambt_07350 d7d5e50be432f047fcc7d0df49db7e2b 303 SUPERFAMILY SSF160240 217 294 9.55E-10 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ambt_21785 afd5f7ef082ab3bed671452fb5a97967 204 Pfam PF03458 UPF0126 domain 93 164 7.9E-18 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 ambt_21785 afd5f7ef082ab3bed671452fb5a97967 204 Pfam PF03458 UPF0126 domain 7 79 1.7E-19 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 ambt_14900 43415582c11322774539e3f9d8890691 252 Pfam PF11932 Protein of unknown function (DUF3450) 8 248 3.8E-95 T 13-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 ambt_14900 43415582c11322774539e3f9d8890691 252 PIRSF PIRSF028069 1 252 2.6E-85 T 13-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 ambt_00480 42d751b23c560c755f8fff639b51813e 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 1.1E-21 T 13-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM ambt_12650 452164f558b11b2fc78a3a8fa53e9f50 504 Pfam PF04293 SpoVR like protein 17 447 2.8E-175 T 13-10-2018 IPR007390 Sporulation stage V, protein R ambt_06875 386f0709dc0fd540228370393474cc52 212 Gene3D G3DSA:3.30.70.1230 1 113 2.2E-8 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_06875 386f0709dc0fd540228370393474cc52 212 SUPERFAMILY SSF55073 6 97 1.24E-6 T 13-10-2018 IPR029787 Nucleotide cyclase ambt_06850 8fee2b43f0b17ff70bd8fbbe5c2f9c70 266 Pfam PF04116 Fatty acid hydroxylase superfamily 89 224 2.3E-27 T 13-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 ambt_02855 5eb23d4459e7595d71870bd0321fdb8f 604 Pfam PF05960 Bacterial protein of unknown function (DUF885) 63 593 1.3E-159 T 13-10-2018 IPR010281 Protein of unknown function DUF885 ambt_16935 c20ec599a8e7e530d70fa747d0d8043f 205 Pfam PF04219 Protein of unknown function, DUF 112 165 1.7E-10 T 13-10-2018 IPR007335 Protein of unknown function DUF413 ambt_11770 23a252c305650f35551127fe01b916ff 203 SUPERFAMILY SSF55729 30 185 1.02E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_11770 23a252c305650f35551127fe01b916ff 203 Gene3D G3DSA:3.40.630.30 8 202 2.3E-29 T 13-10-2018 ambt_11770 23a252c305650f35551127fe01b916ff 203 Pfam PF13302 Acetyltransferase (GNAT) domain 36 182 9.0E-25 T 13-10-2018 IPR000182 GNAT domain ambt_01690 a2eb891e5359af4aef650dc2a6a80cd8 1488 Gene3D G3DSA:3.60.20.10 13 546 0.0 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_01690 a2eb891e5359af4aef650dc2a6a80cd8 1488 Gene3D G3DSA:3.20.20.70 431 793 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_01690 a2eb891e5359af4aef650dc2a6a80cd8 1488 Pfam PF01493 GXGXG motif 1238 1420 4.9E-76 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 ambt_01690 a2eb891e5359af4aef650dc2a6a80cd8 1488 SUPERFAMILY SSF69336 1213 1466 8.76E-86 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ambt_01690 a2eb891e5359af4aef650dc2a6a80cd8 1488 Pfam PF04898 Glutamate synthase central domain 460 738 2.8E-103 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 ambt_01690 a2eb891e5359af4aef650dc2a6a80cd8 1488 SUPERFAMILY SSF51395 433 1194 1.76E-249 T 13-10-2018 ambt_01690 a2eb891e5359af4aef650dc2a6a80cd8 1488 Pfam PF00310 Glutamine amidotransferases class-II 13 426 1.0E-173 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ambt_01690 a2eb891e5359af4aef650dc2a6a80cd8 1488 SUPERFAMILY SSF56235 13 429 1.61E-148 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ambt_01690 a2eb891e5359af4aef650dc2a6a80cd8 1488 Gene3D G3DSA:2.160.20.60 1211 1480 3.9E-98 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ambt_01690 a2eb891e5359af4aef650dc2a6a80cd8 1488 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ambt_01690 a2eb891e5359af4aef650dc2a6a80cd8 1488 Pfam PF01645 Conserved region in glutamate synthase 794 1157 1.5E-151 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ambt_08420 132b2c2d5b377f0f20f797fdcc4389c2 221 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 214 1.6E-46 T 13-10-2018 IPR006214 Bax inhibitor 1-related ambt_11970 db32aca4ad341a7b601b29d226d8bbd4 118 Gene3D G3DSA:3.10.180.10 2 118 2.0E-16 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_11970 db32aca4ad341a7b601b29d226d8bbd4 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 112 9.5E-5 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ambt_11970 db32aca4ad341a7b601b29d226d8bbd4 118 SUPERFAMILY SSF54593 6 115 9.08E-19 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ambt_09370 5e4ac01d98e76be8cf674202ff1cf4de 157 Gene3D G3DSA:3.40.50.1010 1 156 6.1E-50 T 13-10-2018 ambt_09370 5e4ac01d98e76be8cf674202ff1cf4de 157 Pfam PF01936 NYN domain 4 149 1.1E-37 T 13-10-2018 IPR021139 NYN domain, limkain-b1-type ambt_20240 cc0a16541d870a5c41b4f658ddcce901 168 Pfam PF13238 AAA domain 4 114 7.3E-7 T 13-10-2018 ambt_20240 cc0a16541d870a5c41b4f658ddcce901 168 Gene3D G3DSA:3.40.50.300 1 153 6.4E-14 T 13-10-2018 ambt_20240 cc0a16541d870a5c41b4f658ddcce901 168 SUPERFAMILY SSF52540 2 140 6.36E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_15605 5541fd542c12fa4919f576b88edb86d0 138 Gene3D G3DSA:2.170.150.70 7 122 1.2E-16 T 13-10-2018 ambt_15605 5541fd542c12fa4919f576b88edb86d0 138 SUPERFAMILY SSF51316 6 134 3.14E-32 T 13-10-2018 IPR011057 Mss4-like superfamily ambt_15605 5541fd542c12fa4919f576b88edb86d0 138 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 117 5.0E-15 T 13-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ambt_12725 13b655f314bfdff8b20bafd3fd8e45f8 212 SUPERFAMILY SSF53955 24 175 6.62E-26 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily ambt_12725 13b655f314bfdff8b20bafd3fd8e45f8 212 Gene3D G3DSA:1.10.530.10 43 198 4.6E-13 T 13-10-2018 ambt_02440 7a9968b8a7cfef45a24a1fd92bec5a6e 303 SUPERFAMILY SSF103481 223 302 3.27E-5 T 13-10-2018 ambt_03870 429c9892eaa6496bd752e952ffc02929 218 TIGRFAM TIGR02595 PEP_exosort: PEP-CTERM protein-sorting domain 195 216 0.0029 T 13-10-2018 IPR013424 PEP-CTERM protein-sorting domain ambt_11095 ddcef2f6b512174ee1a70cd05cfc086d 282 Gene3D G3DSA:1.20.1080.10 1 249 2.6E-67 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 ambt_11095 ddcef2f6b512174ee1a70cd05cfc086d 282 Pfam PF01226 Formate/nitrite transporter 9 257 1.0E-64 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 ambt_07170 2e821e6bf45609f3ec5b3481a4b9f667 1155 SUPERFAMILY SSF57997 649 916 2.48E-5 T 13-10-2018 ambt_07170 2e821e6bf45609f3ec5b3481a4b9f667 1155 Gene3D G3DSA:3.40.50.300 932 1155 1.7E-44 T 13-10-2018 ambt_07170 2e821e6bf45609f3ec5b3481a4b9f667 1155 Gene3D G3DSA:3.40.50.300 1 274 2.8E-54 T 13-10-2018 ambt_07170 2e821e6bf45609f3ec5b3481a4b9f667 1155 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1146 1.6E-304 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ambt_07170 2e821e6bf45609f3ec5b3481a4b9f667 1155 PIRSF PIRSF005719 1 1155 1.8E-244 T 13-10-2018 IPR024704 Structural maintenance of chromosomes protein ambt_07170 2e821e6bf45609f3ec5b3481a4b9f667 1155 SUPERFAMILY SSF52540 2 1149 2.66E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_07170 2e821e6bf45609f3ec5b3481a4b9f667 1155 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1148 21.29 T 13-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ambt_07170 2e821e6bf45609f3ec5b3481a4b9f667 1155 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1139 1.2E-62 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ambt_01300 8aa94edafcf4536ef6fe79089e0d6bfe 118 Pfam PF01042 Endoribonuclease L-PSP 4 114 1.6E-24 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 ambt_01300 8aa94edafcf4536ef6fe79089e0d6bfe 118 SUPERFAMILY SSF55298 2 114 7.07E-32 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ambt_01300 8aa94edafcf4536ef6fe79089e0d6bfe 118 Gene3D G3DSA:3.30.1330.40 1 117 1.8E-41 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ambt_15980 a397c176aedd08bb9cc2c6703ae18b1a 294 Pfam PF00892 EamA-like transporter family 148 274 2.9E-14 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_15980 a397c176aedd08bb9cc2c6703ae18b1a 294 Pfam PF00892 EamA-like transporter family 18 137 2.7E-11 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_15980 a397c176aedd08bb9cc2c6703ae18b1a 294 SUPERFAMILY SSF103481 185 277 4.18E-12 T 13-10-2018 ambt_15980 a397c176aedd08bb9cc2c6703ae18b1a 294 SUPERFAMILY SSF103481 39 137 4.71E-10 T 13-10-2018 ambt_01820 63d16e2d99e25b567cbfc8089e04fe30 193 Pfam PF04972 BON domain 66 117 7.7E-11 T 13-10-2018 IPR007055 BON domain ambt_01820 63d16e2d99e25b567cbfc8089e04fe30 193 Pfam PF04972 BON domain 127 192 1.5E-12 T 13-10-2018 IPR007055 BON domain ambt_00285 ab0ec759c8881c1c10c2d738545e08a4 327 SUPERFAMILY SSF53850 95 266 1.3E-9 T 13-10-2018 ambt_10580 8b4ed7afb5d1139d79141bfa29847670 484 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 324 463 1.1E-9 T 13-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain ambt_10580 8b4ed7afb5d1139d79141bfa29847670 484 Pfam PF13440 Polysaccharide biosynthesis protein 32 320 2.9E-56 T 13-10-2018 ambt_20495 c33fada0b62fbf8bb63890706cf40d42 97 Pfam PF03203 MerC mercury resistance protein 8 92 1.4E-23 T 13-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 ambt_06950 e2f98a788fca1edeba66f33f58f40cef 785 SUPERFAMILY SSF56935 35 783 1.1E-69 T 13-10-2018 ambt_06950 e2f98a788fca1edeba66f33f58f40cef 785 Pfam PF00593 TonB dependent receptor 322 783 9.0E-24 T 13-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel ambt_06950 e2f98a788fca1edeba66f33f58f40cef 785 Gene3D G3DSA:2.170.130.10 50 176 1.1E-9 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_08280 a8a75fc46e7a163b5b25ccb87de6a5d2 313 Gene3D G3DSA:3.40.50.620 8 282 8.8E-49 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ambt_08280 a8a75fc46e7a163b5b25ccb87de6a5d2 313 Pfam PF01171 PP-loop family 50 211 2.6E-15 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 ambt_08280 a8a75fc46e7a163b5b25ccb87de6a5d2 313 PIRSF PIRSF004976 1 282 4.3E-75 T 13-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 ambt_08280 a8a75fc46e7a163b5b25ccb87de6a5d2 313 SUPERFAMILY SSF52402 26 244 3.26E-54 T 13-10-2018 ambt_08280 a8a75fc46e7a163b5b25ccb87de6a5d2 313 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 19 280 57.047 T 13-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 ambt_18520 ae38db6581101f7ef1166f34d4fe07dd 373 Pfam PF12698 ABC-2 family transporter protein 23 361 5.7E-30 T 13-10-2018 ambt_21115 de5699d2a3cf78558a8bebf1f978574d 368 Pfam PF13515 Fusaric acid resistance protein-like 220 346 7.6E-20 T 13-10-2018 ambt_15215 25c6ad7fe7cac8808926c6c562a13de2 209 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 26 203 1.4E-29 T 13-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like ambt_15215 25c6ad7fe7cac8808926c6c562a13de2 209 Gene3D G3DSA:2.60.120.590 11 208 5.8E-60 T 13-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily ambt_15215 25c6ad7fe7cac8808926c6c562a13de2 209 SUPERFAMILY SSF51197 18 205 5.49E-62 T 13-10-2018 ambt_04925 f25620529c80bad996d44abac3776560 230 Pfam PF09335 SNARE associated Golgi protein 72 192 3.0E-17 T 13-10-2018 IPR032816 SNARE associated Golgi protein ambt_07030 4cbca0baaa8405b8d44fd5fb2ee3d4c1 143 SUPERFAMILY SSF55961 1 142 1.61E-32 T 13-10-2018 ambt_07030 4cbca0baaa8405b8d44fd5fb2ee3d4c1 143 Gene3D G3DSA:3.30.530.20 2 143 4.7E-37 T 13-10-2018 IPR023393 START-like domain superfamily ambt_07030 4cbca0baaa8405b8d44fd5fb2ee3d4c1 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 4.0E-30 T 13-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 ambt_02365 da5337406d9e7e45d4a3cd64c35069d7 100 Pfam PF06945 Protein of unknown function (DUF1289) 18 64 2.5E-15 T 13-10-2018 IPR010710 Protein of unknown function DUF1289 ambt_20340 c07cc4fd1a2fd5a8ba12eccec616e57c 334 SUPERFAMILY SSF56935 78 315 8.75E-6 T 13-10-2018 ambt_05610 89884a3745984d3ff2cc73d21338e8b2 345 Pfam PF12146 Serine aminopeptidase, S33 109 237 1.2E-17 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 ambt_05610 89884a3745984d3ff2cc73d21338e8b2 345 SUPERFAMILY SSF53474 112 343 5.27E-30 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_05610 89884a3745984d3ff2cc73d21338e8b2 345 Gene3D G3DSA:3.40.50.1820 72 342 1.6E-32 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_10595 43a4aa4737f16b3e5f58a3eedd87a550 283 Gene3D G3DSA:3.90.550.10 2 253 9.8E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_10595 43a4aa4737f16b3e5f58a3eedd87a550 283 SUPERFAMILY SSF53448 3 199 1.5E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ambt_10595 43a4aa4737f16b3e5f58a3eedd87a550 283 Pfam PF00535 Glycosyl transferase family 2 4 161 2.0E-27 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ambt_14905 0a546ef05063a42848fa0ab8e8fc5332 898 Gene3D G3DSA:2.170.130.10 32 168 3.3E-8 T 13-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily ambt_14905 0a546ef05063a42848fa0ab8e8fc5332 898 SUPERFAMILY SSF56935 42 898 4.97E-74 T 13-10-2018 ambt_14905 0a546ef05063a42848fa0ab8e8fc5332 898 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 157 3.8E-8 T 13-10-2018 IPR012910 TonB-dependent receptor, plug domain ambt_14080 fdac69917d6d9e767a2014a99c89396d 239 Pfam PF04172 LrgB-like family 20 233 1.2E-65 T 13-10-2018 IPR007300 CidB/LrgB family ambt_18345 20869f5dcefceccea3276edcc7e7cb51 402 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 64 393 1.2E-74 T 13-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX ambt_15985 94a2a30214d8ae273a49b5bd4409cc6f 229 SUPERFAMILY SSF51695 1 227 3.14E-61 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ambt_15985 94a2a30214d8ae273a49b5bd4409cc6f 229 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 222 1.6E-32 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ambt_15985 94a2a30214d8ae273a49b5bd4409cc6f 229 Gene3D G3DSA:3.20.20.190 1 229 2.8E-65 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ambt_19815 089766fe0e0825145d735345ecb2315a 81 Pfam PF09996 Uncharacterized protein conserved in bacteria (DUF2237) 1 79 1.2E-33 T 13-10-2018 IPR018714 Protein of unknown function DUF2237 ambt_19815 089766fe0e0825145d735345ecb2315a 81 Gene3D G3DSA:3.30.56.110 1 81 4.5E-34 T 13-10-2018 ambt_08310 82dd6a5e2bc8757fa425d30769d5d9dd 238 Gene3D G3DSA:3.40.50.1220 7 226 6.1E-78 T 13-10-2018 ambt_08310 82dd6a5e2bc8757fa425d30769d5d9dd 238 SUPERFAMILY SSF52467 4 233 1.26E-70 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ambt_08310 82dd6a5e2bc8757fa425d30769d5d9dd 238 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 5 234 52.1 T 13-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 ambt_08310 82dd6a5e2bc8757fa425d30769d5d9dd 238 Gene3D G3DSA:3.30.1600.10 21 156 6.1E-78 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily ambt_08310 82dd6a5e2bc8757fa425d30769d5d9dd 238 Pfam PF02146 Sir2 family 12 184 5.7E-47 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 ambt_04170 013fdc59e212803e7c6f9ad1a9bb3a76 187 Pfam PF14341 PilX N-terminal 6 53 5.4E-8 T 13-10-2018 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain ambt_12935 15e3a42d8f78d68b7cf4ec797677b064 253 PIRSF PIRSF028069 5 253 2.9E-89 T 13-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 ambt_12935 15e3a42d8f78d68b7cf4ec797677b064 253 Pfam PF11932 Protein of unknown function (DUF3450) 10 250 4.1E-91 T 13-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 ambt_09375 46fb3e98477c5d6fb393b2fc62b8b16d 72 Gene3D G3DSA:1.10.720.30 14 71 1.1E-29 T 13-10-2018 IPR036361 SAP domain superfamily ambt_09375 46fb3e98477c5d6fb393b2fc62b8b16d 72 Pfam PF09905 DNA-binding protein VF530 6 68 1.4E-34 T 13-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 ambt_04520 76ed96086a8ab08e7bb2c78509fb1fac 121 SUPERFAMILY SSF49503 7 119 4.62E-21 T 13-10-2018 IPR008972 Cupredoxin ambt_04520 76ed96086a8ab08e7bb2c78509fb1fac 121 Gene3D G3DSA:2.60.40.420 1 112 1.7E-8 T 13-10-2018 IPR008972 Cupredoxin ambt_04520 76ed96086a8ab08e7bb2c78509fb1fac 121 Pfam PF08985 DP-EP family 7 119 6.0E-35 T 13-10-2018 IPR015078 DP-EP family ambt_06360 fcc1735aec556241e2a84970a705f4d2 139 Pfam PF14081 Domain of unknown function (DUF4262) 11 132 5.0E-39 T 13-10-2018 IPR025358 Protein of unknown function DUF4262 ambt_19560 8fbd99cedd21b80190e1acabe24d7513 250 SUPERFAMILY SSF49503 92 177 6.09E-16 T 13-10-2018 IPR008972 Cupredoxin ambt_19560 8fbd99cedd21b80190e1acabe24d7513 250 Gene3D G3DSA:2.60.40.420 80 177 2.7E-12 T 13-10-2018 IPR008972 Cupredoxin ambt_04195 4ab6eb84e6ccc76db20a6e3b5c9d10a2 199 PIRSF PIRSF004525 1 199 1.2E-35 T 13-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted ambt_18230 c21fc603856b8fc8bae64b5717f67155 317 Pfam PF11231 Protein of unknown function (DUF3034) 29 313 2.9E-101 T 13-10-2018 IPR021393 Protein of unknown function DUF3034 ambt_03585 7d98dadc023626c72c911d6fb00c5fa2 449 Pfam PF04932 O-Antigen ligase 216 335 3.0E-11 T 13-10-2018 IPR007016 O-antigen ligase-related ambt_21910 10af9f2c0e1c9d5240923434eb588f23 196 Pfam PF09335 SNARE associated Golgi protein 53 159 1.2E-14 T 13-10-2018 IPR032816 SNARE associated Golgi protein ambt_05585 dbbca05393a17cc566accef0043e3bf0 142 Pfam PF02566 OsmC-like protein 42 139 1.6E-18 T 13-10-2018 IPR003718 OsmC/Ohr family ambt_05585 dbbca05393a17cc566accef0043e3bf0 142 Gene3D G3DSA:3.30.300.20 2 142 7.5E-38 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta ambt_05585 dbbca05393a17cc566accef0043e3bf0 142 SUPERFAMILY SSF82784 14 141 1.57E-32 T 13-10-2018 IPR036102 OsmC/Ohr superfamily ambt_05585 dbbca05393a17cc566accef0043e3bf0 142 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 3.9E-55 T 13-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 ambt_08605 ebd29448488a03a00d933f803f710eff 254 Pfam PF14329 Domain of unknown function (DUF4386) 43 231 1.3E-9 T 13-10-2018 IPR025495 Protein of unknown function DUF4386 ambt_13745 b31f6b600bbd6d3748803736881babda 101 Pfam PF11743 Protein of unknown function (DUF3301) 7 97 1.1E-26 T 13-10-2018 IPR021732 Protein of unknown function DUF3301 ambt_16775 5d9c827d95bf7772af2ad91964128459 423 Pfam PF03929 PepSY-associated TM region 11 407 4.4E-47 T 13-10-2018 IPR005625 PepSY-associated TM protein ambt_10115 ae1387d4fc3b495cb448524311e8c327 183 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 3 183 4.0E-56 T 13-10-2018 IPR018636 Protein of unknown function DUF2058 ambt_20790 89135ce0b3b17fb9466629f208d03e25 522 Pfam PF07916 TraG-like protein, N-terminal region 8 495 2.3E-88 T 13-10-2018 IPR012931 TraG-like, N-terminal ambt_00985 87b798103084e40454428e2ddc08bff1 175 SUPERFAMILY SSF57997 44 163 5.17E-6 T 13-10-2018 ambt_18605 5b564b72349587cd5cc17173fd584e76 63 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 2 55 1.1E-12 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 ambt_18605 5b564b72349587cd5cc17173fd584e76 63 Pfam PF13657 HipA N-terminal domain 4 53 1.0E-8 T 13-10-2018 IPR017508 HipA, N-terminal subdomain 1 ambt_21445 010e18836b0c652deca6a9dae62d60ff 180 Pfam PF01931 Protein of unknown function DUF84 8 172 9.4E-54 T 13-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 ambt_21445 010e18836b0c652deca6a9dae62d60ff 180 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 178 7.5E-37 T 13-10-2018 IPR002786 Non-canonical purine NTP phosphatase ambt_21445 010e18836b0c652deca6a9dae62d60ff 180 SUPERFAMILY SSF52972 4 178 1.18E-51 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ambt_21445 010e18836b0c652deca6a9dae62d60ff 180 Gene3D G3DSA:3.90.950.10 1 180 3.4E-51 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ambt_10545 39fa14895cdd9564b5ed159d6b60a41f 318 Pfam PF00685 Sulfotransferase domain 30 265 6.2E-8 T 13-10-2018 IPR000863 Sulfotransferase domain GO:0008146 ambt_10545 39fa14895cdd9564b5ed159d6b60a41f 318 SUPERFAMILY SSF52540 27 292 4.96E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ambt_10545 39fa14895cdd9564b5ed159d6b60a41f 318 Gene3D G3DSA:3.40.50.300 1 296 3.2E-17 T 13-10-2018 ambt_07470 726d8568419d718d895747f6a5776043 178 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 163 1.4E-50 T 13-10-2018 IPR018639 Domain of unknown function DUF2062 ambt_14100 ab095dd7d9728a53db1fdd64536eb490 219 SUPERFAMILY SSF54001 13 192 9.81E-17 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ambt_14100 ab095dd7d9728a53db1fdd64536eb490 219 Gene3D G3DSA:3.90.1720.10 1 191 9.8E-23 T 13-10-2018 ambt_19945 edc05ea3f74d4d937a62a90cd3714f02 326 Pfam PF13349 Putative adhesin 44 251 1.2E-9 T 13-10-2018 IPR025164 Putative adhesin ambt_07515 6bddbb19825f3e0625df844f709b6099 544 SUPERFAMILY SSF53474 263 459 2.25E-14 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_07515 6bddbb19825f3e0625df844f709b6099 544 Gene3D G3DSA:3.40.50.1820 261 544 1.2E-16 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_08200 25cad71923651482ba209a9fe380ada4 162 Pfam PF00034 Cytochrome c 35 133 3.3E-5 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_08200 25cad71923651482ba209a9fe380ada4 162 Gene3D G3DSA:1.10.760.10 7 138 3.1E-10 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_08200 25cad71923651482ba209a9fe380ada4 162 SUPERFAMILY SSF46626 13 137 4.28E-12 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ambt_09775 fde9fcb29b7fbfcacc9e60cbbecfac76 197 Gene3D G3DSA:3.30.420.40 15 146 4.5E-10 T 13-10-2018 ambt_09775 fde9fcb29b7fbfcacc9e60cbbecfac76 197 Pfam PF06723 MreB/Mbl protein 39 143 7.2E-6 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ambt_20280 9ac10be597352bcf17991901aa72a908 72 Pfam PF11127 Protein of unknown function (DUF2892) 4 56 1.7E-13 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 ambt_19000 6159943472c9d0b0fd9571b6e39f903e 979 SUPERFAMILY SSF69318 739 903 1.44E-8 T 13-10-2018 ambt_09635 7a871d0cdf8b6517a8e401051670d1cf 248 Gene3D G3DSA:2.30.210.20 6 61 9.0E-24 T 13-10-2018 ambt_09635 7a871d0cdf8b6517a8e401051670d1cf 248 Gene3D G3DSA:3.40.630.70 62 242 5.0E-63 T 13-10-2018 ambt_09635 7a871d0cdf8b6517a8e401051670d1cf 248 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 248 87.52 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 ambt_09635 7a871d0cdf8b6517a8e401051670d1cf 248 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 222 3.8E-62 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 ambt_09635 7a871d0cdf8b6517a8e401051670d1cf 248 SUPERFAMILY SSF55729 3 227 3.07E-85 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_09635 7a871d0cdf8b6517a8e401051670d1cf 248 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 211 1.7E-72 T 13-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 ambt_17225 6662eeb7051dc2cdc74c8c0966b455ed 214 Pfam PF04612 Type II secretion system (T2SS), protein M 6 69 1.3E-7 T 13-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 ambt_21085 c08d050346295caee71cd231e064ebb5 549 Gene3D G3DSA:3.90.1300.10 15 531 3.1E-156 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ambt_21085 c08d050346295caee71cd231e064ebb5 549 Pfam PF01425 Amidase 66 514 7.9E-97 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ambt_21085 c08d050346295caee71cd231e064ebb5 549 SUPERFAMILY SSF75304 36 522 1.57E-115 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ambt_00045 a438d4b421f3fe53a7a07c447988a3c1 150 Pfam PF10675 Protein of unknown function (DUF2489) 14 141 1.6E-40 T 13-10-2018 IPR019617 Domain of unknown function DUF2489 ambt_01875 f4760fc9daf5fc50b82007074b764c85 182 Pfam PF12915 Protein of unknown function (DUF3833) 17 180 1.8E-60 T 13-10-2018 IPR024409 Protein of unknown function DUF3833 ambt_00255 7935ee946d2ca3f3d9ca8e690ba0ec85 359 SMART SM01358 29 262 7.7E-12 T 13-10-2018 IPR032255 Helical bimodular sensor domain ambt_13260 3d0c49f66d573b5bdd5adf91651d8b49 178 Pfam PF03748 Flagellar basal body-associated protein FliL 77 178 3.3E-20 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 ambt_15400 9c747df4b7c44dc8ce4476e28b19070b 268 Pfam PF01925 Sulfite exporter TauE/SafE 12 263 2.1E-48 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ambt_11260 5dbaacdc8c3b0b506c9f4e29a0b1b382 330 Gene3D G3DSA:2.60.40.10 209 264 5.5E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_01750 755e50313c859ce7dcbae93d3a445b1c 416 Pfam PF07730 Histidine kinase 218 282 6.3E-14 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ambt_01750 755e50313c859ce7dcbae93d3a445b1c 416 SUPERFAMILY SSF55874 306 404 1.03E-6 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_01750 755e50313c859ce7dcbae93d3a445b1c 416 Gene3D G3DSA:3.30.565.10 284 404 3.2E-18 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ambt_02025 819a02d32fa9c3712c6d571c2a30f8be 179 Pfam PF02325 YGGT family 106 172 2.5E-20 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 ambt_02025 819a02d32fa9c3712c6d571c2a30f8be 179 Pfam PF02325 YGGT family 10 78 3.8E-18 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 ambt_14085 72ab32a386c3d06b9d91de6de22fc465 152 Pfam PF03788 LrgA family 19 110 6.3E-22 T 13-10-2018 IPR005538 LrgA/CidA family GO:0016021 ambt_20255 7166e9b85f604cb699357c4869a481bd 379 Pfam PF01839 FG-GAP repeat 344 374 9.7E-5 T 13-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 ambt_20255 7166e9b85f604cb699357c4869a481bd 379 Gene3D G3DSA:2.130.10.130 192 376 7.8E-10 T 13-10-2018 IPR028994 Integrin alpha, N-terminal Reactome: R-HSA-216083 ambt_20255 7166e9b85f604cb699357c4869a481bd 379 SUPERFAMILY SSF69318 47 375 2.62E-47 T 13-10-2018 ambt_20255 7166e9b85f604cb699357c4869a481bd 379 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 253 313 1.5E-10 T 13-10-2018 ambt_20255 7166e9b85f604cb699357c4869a481bd 379 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 101 165 1.3E-11 T 13-10-2018 ambt_04975 150645aba9ab18dad3b602e82ba14ddc 390 Gene3D G3DSA:2.40.70.10 253 385 4.3E-21 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily ambt_04975 150645aba9ab18dad3b602e82ba14ddc 390 SUPERFAMILY SSF50630 267 370 1.51E-9 T 13-10-2018 IPR021109 Aspartic peptidase domain superfamily ambt_04975 150645aba9ab18dad3b602e82ba14ddc 390 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 282 293 - T 13-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 ambt_04975 150645aba9ab18dad3b602e82ba14ddc 390 Pfam PF13975 gag-polyprotein putative aspartyl protease 276 365 1.1E-15 T 13-10-2018 ambt_08325 1942bf0b2706eee4fa9d0ec463dba1d1 235 SMART SM01144 29 221 6.9E-62 T 13-10-2018 IPR005636 DTW ambt_08325 1942bf0b2706eee4fa9d0ec463dba1d1 235 Pfam PF03942 DTW domain 32 215 1.6E-38 T 13-10-2018 IPR005636 DTW ambt_11485 ba394735e92d8eaf6857a4f39680cd69 226 Pfam PF01292 Prokaryotic cytochrome b561 7 181 9.0E-25 T 13-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ambt_11485 ba394735e92d8eaf6857a4f39680cd69 226 SUPERFAMILY SSF81342 2 190 2.22E-39 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ambt_11485 ba394735e92d8eaf6857a4f39680cd69 226 Gene3D G3DSA:1.20.950.20 1 169 1.2E-18 T 13-10-2018 ambt_12885 06169871a84d6bab0484f97e11e8e2a2 214 Pfam PF04973 Nicotinamide mononucleotide transporter 18 194 5.5E-37 T 13-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 ambt_12885 06169871a84d6bab0484f97e11e8e2a2 214 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 18 196 1.4E-13 T 13-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 ambt_18575 562b57bb0232d9a9f9efdda329a21af3 252 SUPERFAMILY SSF57783 214 251 1.7E-6 T 13-10-2018 ambt_18575 562b57bb0232d9a9f9efdda329a21af3 252 SUPERFAMILY SSF52980 95 204 2.04E-26 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ambt_18575 562b57bb0232d9a9f9efdda329a21af3 252 Gene3D G3DSA:3.40.1350.10 96 205 2.0E-8 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 ambt_18575 562b57bb0232d9a9f9efdda329a21af3 252 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 216 252 8.4E-10 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 ambt_18575 562b57bb0232d9a9f9efdda329a21af3 252 Pfam PF04471 Restriction endonuclease 90 199 1.6E-26 T 13-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 ambt_03095 389c7ef10abd152a32e419c413315286 218 Pfam PF00881 Nitroreductase family 10 193 1.0E-22 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ambt_03095 389c7ef10abd152a32e419c413315286 218 Gene3D G3DSA:3.40.109.10 1 218 7.1E-55 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ambt_03095 389c7ef10abd152a32e419c413315286 218 SUPERFAMILY SSF55469 5 216 1.44E-55 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ambt_00785 67ce125185428ca90d9e91d7fdacb3e6 363 Pfam PF00487 Fatty acid desaturase 28 250 5.0E-24 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ambt_00785 67ce125185428ca90d9e91d7fdacb3e6 363 PRINTS PR00075 Fatty acid desaturase family 1 signature 217 231 5.4E-36 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 ambt_00785 67ce125185428ca90d9e91d7fdacb3e6 363 PRINTS PR00075 Fatty acid desaturase family 1 signature 174 195 5.4E-36 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 ambt_00785 67ce125185428ca90d9e91d7fdacb3e6 363 PRINTS PR00075 Fatty acid desaturase family 1 signature 46 66 5.4E-36 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 ambt_00785 67ce125185428ca90d9e91d7fdacb3e6 363 PRINTS PR00075 Fatty acid desaturase family 1 signature 84 113 5.4E-36 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 ambt_00785 67ce125185428ca90d9e91d7fdacb3e6 363 PRINTS PR00075 Fatty acid desaturase family 1 signature 143 161 5.4E-36 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 ambt_00785 67ce125185428ca90d9e91d7fdacb3e6 363 PRINTS PR00075 Fatty acid desaturase family 1 signature 23 45 5.4E-36 T 13-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 ambt_17330 a010e14b43c0e57771f390f3fec2d077 181 SUPERFAMILY SSF141868 47 152 2.35E-8 T 13-10-2018 IPR035919 EAL domain superfamily ambt_21890 0edbb0a0d55204a9a5bf79335392f521 286 Pfam PF11219 Protein of unknown function (DUF3014) 122 277 1.8E-51 T 13-10-2018 IPR021382 Protein of unknown function DUF3014 ambt_13950 68e098ed83e0f33a01e58274b8bbc05c 398 Pfam PF12679 ABC-2 family transporter protein 2 394 4.0E-29 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 ambt_08660 a1ccd5b6b2c279efd9f795e07ca17dee 237 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 86 172 4.0E-5 T 13-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 ambt_03530 7282edfc23a62cfce145707e6bbe544a 301 Pfam PF03994 Domain of Unknown Function (DUF350) 93 144 2.5E-5 T 13-10-2018 IPR007140 Protein of unknown function DUF350 ambt_16950 a00c76509e8ee8a28c576f28d43abeab 237 Pfam PF14335 Domain of unknown function (DUF4391) 17 229 1.4E-51 T 13-10-2018 IPR025503 Protein of unknown function DUF4391 ambt_05000 3008af18d24df3b80a0fea08f3e7f7e4 100 Pfam PF08891 YfcL protein 15 95 1.9E-29 T 13-10-2018 IPR014987 Uncharacterised protein family YfcL ambt_14060 3dad82d0b771a7780e5401e8692ada7b 175 Pfam PF07603 Protein of unknown function (DUF1566) 47 170 1.1E-27 T 13-10-2018 IPR011460 Protein of unknown function DUF1566 ambt_09795 d88a3e257f3decc42190fa18c5d890d1 203 Pfam PF06197 Protein of unknown function (DUF998) 10 199 6.6E-25 T 13-10-2018 IPR009339 Protein of unknown function DUF998 ambt_21935 3522b0b6f3edcf6da47f6ce8f84949e2 213 Pfam PF00156 Phosphoribosyl transferase domain 47 159 2.6E-10 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ambt_21935 3522b0b6f3edcf6da47f6ce8f84949e2 213 SUPERFAMILY SSF53271 2 211 4.84E-48 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like ambt_21935 3522b0b6f3edcf6da47f6ce8f84949e2 213 Gene3D G3DSA:3.40.50.2020 1 213 1.4E-76 T 13-10-2018 ambt_21935 3522b0b6f3edcf6da47f6ce8f84949e2 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 33.384 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_21935 3522b0b6f3edcf6da47f6ce8f84949e2 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 4.6E-63 T 13-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ambt_02535 5ec566569706f763c45f7dc553d6522b 81 Pfam PF14019 Protein of unknown function (DUF4235) 14 72 7.4E-16 T 13-10-2018 IPR025329 Protein of unknown function DUF4235 ambt_17390 9be174b8c41504fde3a68bad7e174821 286 SUPERFAMILY SSF53474 56 283 1.51E-19 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_17390 9be174b8c41504fde3a68bad7e174821 286 Gene3D G3DSA:3.40.50.1820 57 285 9.1E-16 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_11855 9107c67c59c3ffd41b8ad32fe022b17f 403 Pfam PF00583 Acetyltransferase (GNAT) family 52 156 4.0E-13 T 13-10-2018 IPR000182 GNAT domain ambt_11855 9107c67c59c3ffd41b8ad32fe022b17f 403 SUPERFAMILY SSF55729 29 179 1.61E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase ambt_11855 9107c67c59c3ffd41b8ad32fe022b17f 403 Pfam PF11814 Peptidase_C39 like family 190 397 4.3E-86 T 13-10-2018 IPR021770 Protein of unknown function DUF3335 ambt_11855 9107c67c59c3ffd41b8ad32fe022b17f 403 Gene3D G3DSA:3.40.630.30 28 187 1.6E-31 T 13-10-2018 ambt_05895 3df63a5f6f239448b8bb0caf9647b8a0 109 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 1 62 2.0E-18 T 13-10-2018 ambt_03630 1cd9b4b41b838fd6f2bdcbd59def6bc9 474 Pfam PF13440 Polysaccharide biosynthesis protein 32 322 1.4E-56 T 13-10-2018 ambt_09455 93c186fde1d2a917d3c10a8cbdd68f83 147 Pfam PF01814 Hemerythrin HHE cation binding domain 3 118 2.1E-15 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 ambt_09455 93c186fde1d2a917d3c10a8cbdd68f83 147 Gene3D G3DSA:1.20.120.520 1 140 3.5E-9 T 13-10-2018 ambt_03330 6b9b2e43a48e02e87fec88dfcb4eb80f 520 Pfam PF03929 PepSY-associated TM region 11 372 1.9E-53 T 13-10-2018 IPR005625 PepSY-associated TM protein ambt_09250 c601249faedec96d37f46431dbcd12cd 264 Pfam PF09955 Predicted integral membrane protein (DUF2189) 77 191 5.0E-26 T 13-10-2018 IPR018692 Predicted integral membrane protein DUF2189 ambt_02935 6a57441bacfce1066feb51db2179593d 177 Pfam PF03929 PepSY-associated TM region 11 165 1.4E-12 T 13-10-2018 IPR005625 PepSY-associated TM protein ambt_03760 2a99944fe3bea48202a27efcc91f7459 226 Pfam PF06693 Protein of unknown function (DUF1190) 63 216 5.0E-46 T 13-10-2018 IPR009576 Biofilm formation YgiB ambt_07520 856aafcd0e6746e7faa6d6c7b264636a 157 Pfam PF11143 Protein of unknown function (DUF2919) 5 150 1.6E-40 T 13-10-2018 IPR021318 Protein of unknown function DUF2919 ambt_01075 48ff1515428af07fd020c277ebd8abbd 76 Pfam PF13333 Integrase core domain 14 67 5.4E-12 T 13-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ambt_01075 48ff1515428af07fd020c277ebd8abbd 76 SUPERFAMILY SSF53098 1 63 5.69E-9 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily ambt_06195 119da8173afa90f147e0e2556c398c5e 229 Pfam PF01988 VIT family 15 223 1.3E-54 T 13-10-2018 IPR008217 Ccc1 family ambt_18150 66e5b4fa7165428fc2d79b0558be116a 455 Pfam PF11737 Protein of unknown function (DUF3300) 39 270 4.2E-77 T 13-10-2018 IPR021728 Protein of unknown function DUF3300 ambt_13780 b55963db3971ade1aa48c817a80bddf2 121 Pfam PF11399 Protein of unknown function (DUF3192) 18 118 3.4E-38 T 13-10-2018 IPR021534 Protein of unknown function DUF3192 ambt_15990 b6c706af694f785fc2ae787ffacf85d0 142 Pfam PF03203 MerC mercury resistance protein 12 120 2.5E-26 T 13-10-2018 IPR004891 Mercury transport protein MerC GO:0015097|GO:0015694|GO:0016020 ambt_00930 271c0b2998665e0dd20175a02cd5625a 398 SUPERFAMILY SSF56935 21 398 8.24E-23 T 13-10-2018 ambt_17515 349c8a76d4aa2b12e17553e58ea9007e 316 Pfam PF00892 EamA-like transporter family 11 147 9.9E-14 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_17515 349c8a76d4aa2b12e17553e58ea9007e 316 TIGRFAM TIGR00688 rarD: protein RarD 12 263 3.9E-78 T 13-10-2018 IPR004626 RarD protein GO:0005887 ambt_17515 349c8a76d4aa2b12e17553e58ea9007e 316 SUPERFAMILY SSF103481 45 149 1.57E-12 T 13-10-2018 ambt_17515 349c8a76d4aa2b12e17553e58ea9007e 316 SUPERFAMILY SSF103481 189 287 1.07E-6 T 13-10-2018 ambt_05150 5cb4d62ad23d2d84441bd94164475405 311 SMART SM01321 12 190 0.0027 T 13-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 ambt_05150 5cb4d62ad23d2d84441bd94164475405 311 SUPERFAMILY SSF143422 16 196 2.35E-18 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 ambt_17960 fed972f18cefd724752e7ade0db3278c 289 Gene3D G3DSA:1.10.10.10 2 89 2.7E-5 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ambt_05155 a612e88b7df9ac60c81a44142e952ea2 414 Pfam PF15975 Flotillin 250 372 5.0E-34 T 13-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 ambt_01380 6322b71532c541acb3ac75940761dc4f 526 Pfam PF14224 Domain of unknown function (DUF4331) 23 521 4.0E-139 T 13-10-2018 IPR025566 Protein of unknown function DUF4331 ambt_01010 73fa65529e6a7ba49fa745ec0b82d8cf 498 Gene3D G3DSA:2.40.10.120 19 191 1.3E-6 T 13-10-2018 ambt_01010 73fa65529e6a7ba49fa745ec0b82d8cf 498 Gene3D G3DSA:2.60.200.20 401 496 8.5E-21 T 13-10-2018 ambt_01010 73fa65529e6a7ba49fa745ec0b82d8cf 498 SUPERFAMILY SSF49879 409 495 4.59E-21 T 13-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ambt_01010 73fa65529e6a7ba49fa745ec0b82d8cf 498 Pfam PF00498 FHA domain 421 487 8.9E-14 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_01010 73fa65529e6a7ba49fa745ec0b82d8cf 498 SMART SM00240 419 470 9.1E-5 T 13-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ambt_01010 73fa65529e6a7ba49fa745ec0b82d8cf 498 SUPERFAMILY SSF50494 32 165 1.43E-7 T 13-10-2018 IPR009003 Peptidase S1, PA clan ambt_02085 d42f6becc122a142bcbafcbe9ecf4afe 264 Pfam PF01435 Peptidase family M48 77 245 7.5E-39 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ambt_02085 d42f6becc122a142bcbafcbe9ecf4afe 264 Gene3D G3DSA:3.30.2010.10 53 145 2.6E-6 T 13-10-2018 ambt_00510 ef0d8ca83d5666f55653666f3de145e0 81 Pfam PF13372 Alginate export 12 57 1.4E-6 T 13-10-2018 IPR025388 Alginate export domain ambt_18210 9b99fb77ede1581349f6317d6403ae5d 200 Pfam PF01810 LysE type translocator 15 198 4.1E-36 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ambt_14890 5cc2ffbd98a2e03039f9b3dce2770258 172 Pfam PF01618 MotA/TolQ/ExbB proton channel family 62 165 6.0E-21 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ambt_04420 eb9fe64a04072d21cb8d67595e49c5df 242 Pfam PF07103 Protein of unknown function (DUF1365) 5 238 5.3E-67 T 13-10-2018 IPR010775 Protein of unknown function DUF1365 ambt_09315 562fa94a20e992f645932a713c36a5e4 348 Pfam PF06271 RDD family 236 324 2.7E-16 T 13-10-2018 IPR010432 RDD ambt_09850 79752d9ddddb39c459ee067ccf116f0c 71 Pfam PF09656 Putative transmembrane protein (PGPGW) 3 50 1.8E-6 T 13-10-2018 IPR019099 Uncharacterised protein family PGPGW, transmembrane ambt_00120 e9477677dc68926c113ef730fd4c316b 158 Pfam PF04361 Protein of unknown function (DUF494) 1 158 5.2E-62 T 13-10-2018 IPR007456 Smg ambt_00120 e9477677dc68926c113ef730fd4c316b 158 Hamap MF_00598 Protein Smg [smg]. 1 158 32.272 T 13-10-2018 IPR007456 Smg ambt_18475 194aad556b6178c68312d801dfe74558 393 Pfam PF14240 YHYH protein 191 287 1.7E-10 T 13-10-2018 IPR025924 YHYH domain ambt_05595 dc2265331e49f6a4f3092526e7c50847 262 SUPERFAMILY SSF53850 40 254 2.17E-22 T 13-10-2018 ambt_05595 dc2265331e49f6a4f3092526e7c50847 262 Gene3D G3DSA:3.40.190.10 45 254 6.8E-13 T 13-10-2018 ambt_05595 dc2265331e49f6a4f3092526e7c50847 262 Gene3D G3DSA:3.40.190.10 118 214 6.8E-13 T 13-10-2018 ambt_05595 dc2265331e49f6a4f3092526e7c50847 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 255 4.3E-9 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ambt_15090 11213a6e31a04555aa21f205d1b8ddd4 181 Pfam PF11454 Protein of unknown function (DUF3016) 26 166 9.1E-51 T 13-10-2018 IPR021557 Protein of unknown function DUF3016 ambt_18220 225110c0231d70f911ad801d6c5422c1 197 SUPERFAMILY SSF53335 3 183 2.19E-18 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ambt_18220 225110c0231d70f911ad801d6c5422c1 197 Gene3D G3DSA:3.40.50.150 2 194 3.5E-18 T 13-10-2018 ambt_18220 225110c0231d70f911ad801d6c5422c1 197 Pfam PF13649 Methyltransferase domain 45 137 1.0E-7 T 13-10-2018 ambt_01270 41527feee8172f65db2cfedbeec68e3b 194 Gene3D G3DSA:1.10.1740.10 2 121 5.6E-11 T 13-10-2018 ambt_01270 41527feee8172f65db2cfedbeec68e3b 194 Pfam PF04542 Sigma-70 region 2 27 94 1.7E-10 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ambt_01270 41527feee8172f65db2cfedbeec68e3b 194 SUPERFAMILY SSF88946 11 98 1.31E-13 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ambt_01270 41527feee8172f65db2cfedbeec68e3b 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 184 1.4E-14 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ambt_10505 6bf0ada5fce79bdd9b44a8d7f1dbe8e4 635 Pfam PF01757 Acyltransferase family 13 332 1.7E-31 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ambt_20195 89af80182cf01bcaa26fe4cfe2a22a7d 212 Pfam PF11845 Protein of unknown function (DUF3365) 65 208 3.1E-21 T 13-10-2018 IPR021796 Protein of unknown function DUF3365 ambt_01510 69e3f09bff33354ebd237fa379af51ee 227 Pfam PF03695 Uncharacterised protein family (UPF0149) 26 188 4.6E-11 T 13-10-2018 IPR011978 Uncharacterised protein family UPF0149 ambt_13020 42a55f3a7e02e2528c4ba200f1685d14 79 Pfam PF06667 Phage shock protein B 7 77 1.0E-34 T 13-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 ambt_13020 42a55f3a7e02e2528c4ba200f1685d14 79 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 7 78 8.7E-31 T 13-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 ambt_19460 d57ed5a4572f3ba18cc91101b375d84e 200 Pfam PF01914 MarC family integral membrane protein 4 192 2.9E-53 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 ambt_19460 d57ed5a4572f3ba18cc91101b375d84e 200 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 188 3.3E-30 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 ambt_20855 e1f1d4edcb8b1d2d3fc0adaa8c34969b 96 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 23 95 8.5E-21 T 13-10-2018 IPR019110 Uncharacterised protein family, RAQPRD ambt_12460 6de471a5ce596ee9c696a4aed9252f6e 260 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 44 209 2.7E-43 T 13-10-2018 IPR003734 Domain of unknown function DUF155 ambt_21700 30d99591b1ef1b019b18625e372b9e8f 222 Gene3D G3DSA:3.40.30.10 34 210 3.7E-41 T 13-10-2018 ambt_21700 30d99591b1ef1b019b18625e372b9e8f 222 Pfam PF02630 SCO1/SenC 44 188 1.7E-30 T 13-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_21700 30d99591b1ef1b019b18625e372b9e8f 222 SUPERFAMILY SSF52833 45 197 1.94E-41 T 13-10-2018 IPR036249 Thioredoxin-like superfamily ambt_19730 d9ff367d0f2168b67a537116a3c4950c 62 Pfam PF14255 Cysteine-rich CPXCG 9 46 6.0E-6 T 13-10-2018 IPR025990 Cysteine-rich CPXCG protein ambt_20700 82f0da70b4b22c3523102cd08bc8c398 229 Pfam PF08856 Protein of unknown function (DUF1826) 29 226 3.2E-66 T 13-10-2018 IPR014955 Protein of unknown function DUF1826 ambt_11585 8a04ea8f0679ad8398fc7da6cc688d2d 431 Pfam PF04286 Protein of unknown function (DUF445) 53 425 1.1E-85 T 13-10-2018 IPR007383 Protein of unknown function DUF445 ambt_04385 abb423d8685dec22c50b48ccedebba00 166 SUPERFAMILY SSF101307 9 155 6.93E-43 T 13-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 ambt_04385 abb423d8685dec22c50b48ccedebba00 166 Pfam PF04608 Phosphatidylglycerophosphatase A 16 155 3.0E-48 T 13-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 ambt_04385 abb423d8685dec22c50b48ccedebba00 166 PIRSF PIRSF006162 6 163 6.2E-51 T 13-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ambt_21720 0d448a9f4449f31f9ee2362b08eda6a4 235 Pfam PF02104 SURF1 family 18 217 4.5E-32 T 13-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ambt_11085 33708490433c59e61946e735a0664100 366 Pfam PF01882 Protein of unknown function DUF58 227 356 1.8E-8 T 13-10-2018 IPR002881 Domain of unknown function DUF58 ambt_13810 147284639354bd86406685d2e2917f05 124 Pfam PF11399 Protein of unknown function (DUF3192) 22 119 1.2E-43 T 13-10-2018 IPR021534 Protein of unknown function DUF3192 ambt_06620 15ad098e642bbef629a0de913e9f5923 130 Pfam PF12514 Protein of unknown function (DUF3718) 32 100 1.3E-21 T 13-10-2018 IPR022193 Protein of unknown function DUF3718 ambt_19435 538fd07c6bc445fc362c7ab4208c577e 326 PIRSF PIRSF003097 21 322 9.8E-69 T 13-10-2018 IPR004513 Cell division protein FtsX GO:0016021 ambt_08045 03dba9da36b6be748831a4a2562a0825 80 Pfam PF11197 Protein of unknown function (DUF2835) 11 78 3.2E-23 T 13-10-2018 IPR021363 Protein of unknown function DUF2835 ambt_15505 c04117b5da15e72fddf04379cb86a679 192 Pfam PF09335 SNARE associated Golgi protein 53 158 2.0E-12 T 13-10-2018 IPR032816 SNARE associated Golgi protein ambt_03310 db49c9b25904a8e40f559cb857f8f9c3 162 Pfam PF05360 yiaA/B two helix domain 78 130 1.7E-20 T 13-10-2018 IPR008024 YiaAB two helix ambt_03310 db49c9b25904a8e40f559cb857f8f9c3 162 Pfam PF05360 yiaA/B two helix domain 15 67 2.2E-20 T 13-10-2018 IPR008024 YiaAB two helix ambt_20920 9f2610f294a4e2b1129cf75929edd109 212 Pfam PF11769 Protein of unknown function (DUF3313) 19 200 6.0E-37 T 13-10-2018 IPR021747 Protein of unknown function DUF3313 ambt_05240 e4443e8efb164815122b48b2c1e1a1b9 469 Pfam PF00939 Sodium:sulfate symporter transmembrane region 36 462 2.1E-60 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 ambt_05240 e4443e8efb164815122b48b2c1e1a1b9 469 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 37 467 1.9E-74 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 ambt_12020 d92ea1fd6066a9040c01cdf56f00a848 238 Pfam PF13795 HupE / UreJ protein 60 205 2.9E-47 T 13-10-2018 IPR032809 Putative HupE/UreJ protein ambt_12220 d89ee9e4136940e29844486f3a0e3114 222 SUPERFAMILY SSF53474 26 213 1.06E-12 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_12220 d89ee9e4136940e29844486f3a0e3114 222 Gene3D G3DSA:3.40.50.1820 21 205 9.1E-7 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold ambt_08050 e3164a8c6b7e40b132fff6a4cee17163 687 Pfam PF06980 Protein of unknown function (DUF1302) 33 686 1.8E-181 T 13-10-2018 IPR010727 Protein of unknown function DUF1302 ambt_12775 84b47fde6f3e07164c709b660e48eedf 145 Pfam PF09945 Predicted membrane protein (DUF2177) 13 133 6.0E-36 T 13-10-2018 IPR018687 Protein of unknown function DUF2177, membrane ambt_07715 d85443ecb26901f5db5117e6e23c2093 363 Gene3D G3DSA:3.40.710.10 33 358 6.5E-71 T 13-10-2018 ambt_07715 d85443ecb26901f5db5117e6e23c2093 363 SUPERFAMILY SSF56601 36 357 3.44E-65 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ambt_07715 d85443ecb26901f5db5117e6e23c2093 363 Pfam PF00144 Beta-lactamase 39 345 1.2E-52 T 13-10-2018 IPR001466 Beta-lactamase-related ambt_19250 a98b5680c89612e1156b1e017467b81d 211 Pfam PF02036 SCP-2 sterol transfer family 16 120 7.0E-12 T 13-10-2018 IPR003033 SCP2 sterol-binding domain ambt_18770 f5dc77f81f1c064277e2ebf0dc799f0e 278 Pfam PF11316 Putative rhamnosyl transferase 3 218 3.0E-49 T 13-10-2018 IPR021466 Putative rhamnosyl transferase ambt_10155 efb16d7eae3a1376d676a605297d87b3 497 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 54 446 1.4E-126 T 13-10-2018 IPR020010 Conserved hypothetical protein CHP03503 ambt_08135 c2daf6a52bb0986c0077d0bee2ce0609 441 Pfam PF10011 Predicted membrane protein (DUF2254) 19 391 1.7E-90 T 13-10-2018 IPR018723 Protein of unknown function DUF2254, membrane ambt_19010 3c855c2e05f966f68a830f30ba7c9477 301 Pfam PF13524 Glycosyl transferases group 1 220 289 6.4E-6 T 13-10-2018 ambt_19745 81b5986c87964b6b39e33abc63ffc5ad 297 SUPERFAMILY SSF56317 4 293 3.4E-84 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ambt_19745 81b5986c87964b6b39e33abc63ffc5ad 297 Gene3D G3DSA:3.60.110.10 1 296 7.1E-93 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ambt_19745 81b5986c87964b6b39e33abc63ffc5ad 297 Pfam PF00795 Carbon-nitrogen hydrolase 8 275 1.8E-58 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ambt_05745 c8ca8f621aa72ae9b18b0808bf92eb99 334 Pfam PF14240 YHYH protein 192 285 9.0E-12 T 13-10-2018 IPR025924 YHYH domain ambt_00595 6ec9341168ae3cf2d2995d28e4e0d8c6 450 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 127 392 2.2E-28 T 13-10-2018 IPR026588 Choice-of-anchor A domain ambt_00595 6ec9341168ae3cf2d2995d28e4e0d8c6 450 TIGRFAM TIGR04215 choice_anch_A: choice-of-anchor A domain 42 120 4.2E-14 T 13-10-2018 IPR026588 Choice-of-anchor A domain ambt_01480 6fe4fb9d1b9e858f349ce0bf3e368d5f 189 Gene3D G3DSA:2.60.40.10 94 179 2.8E-6 T 13-10-2018 IPR013783 Immunoglobulin-like fold ambt_05795 9885fb40c926d476ab1c07933ea35330 383 Pfam PF11199 Protein of unknown function (DUF2891) 52 376 5.1E-136 T 13-10-2018 IPR021365 Protein of unknown function DUF2891 ambt_00715 9fbc04d1e066e96cda33b21e47bf499d 223 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 221 1.2E-78 T 13-10-2018 IPR014319 Phage shock protein, PspA ambt_00715 9fbc04d1e066e96cda33b21e47bf499d 223 Pfam PF04012 PspA/IM30 family 2 222 2.7E-40 T 13-10-2018 IPR007157 PspA/IM30 ambt_10190 81feeba7fc0e82fbcd3996c191ff5be2 100 Gene3D G3DSA:2.40.10.220 4 100 1.2E-11 T 13-10-2018 ambt_10190 81feeba7fc0e82fbcd3996c191ff5be2 100 SUPERFAMILY SSF141371 2 99 1.45E-11 T 13-10-2018 ambt_10190 81feeba7fc0e82fbcd3996c191ff5be2 100 Pfam PF07238 PilZ domain 7 99 1.6E-14 T 13-10-2018 IPR009875 PilZ domain GO:0035438 ambt_11120 8dc62c88604db1d17a31390f7bb00d9d 152 Pfam PF04241 Protein of unknown function (DUF423) 45 131 5.0E-28 T 13-10-2018 IPR006696 Protein of unknown function DUF423 ambt_15200 f12697e6571c469c609c5222c116abae 200 Pfam PF06042 Nucleotidyltransferase 32 191 1.4E-57 T 13-10-2018 IPR009267 Putative nucleotidyltransferase ambt_00935 d9c170f4caa55a283c7bf977e1ccf290 139 SUPERFAMILY SSF53850 21 134 2.01E-8 T 13-10-2018 ambt_12470 f9a22c4d29564bce4638d9fd6e1c66ed 286 SUPERFAMILY SSF53850 43 245 1.85E-13 T 13-10-2018 ambt_16280 e07c8a5e0c03fa36776f2e0aa459a45b 231 Pfam PF11201 Protein of unknown function (DUF2982) 73 223 1.3E-61 T 13-10-2018 IPR021367 Protein of unknown function DUF2982 ambt_12035 6a98dabe3dcfd26a83a05843eb016001 335 Pfam PF13280 WYL domain 154 322 8.1E-9 T 13-10-2018 IPR026881 WYL domain ambt_12850 3177ff3abfc77735b7b658468b639e77 119 Pfam PF00892 EamA-like transporter family 13 83 1.0E-8 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ambt_12745 46d2f7e8f562b1a10e7d8015d58ab498 278 Pfam PF00849 RNA pseudouridylate synthase 12 196 1.5E-25 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_12745 46d2f7e8f562b1a10e7d8015d58ab498 278 SUPERFAMILY SSF55120 2 238 1.92E-41 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ambt_10440 802174160fbced20db906b607385acf5 61 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 1 58 2.5E-25 T 13-10-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin ambt_03785 38ab2871bd4309c58549ce4ddd085bb5 129 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 4 128 1.0E-38 T 13-10-2018 IPR019231 Protein of unknown function DUF2170 ambt_20055 1c4921ad2e164c810b1f2a19cabd4d95 392 Pfam PF14064 HmuY protein 80 227 2.0E-7 T 13-10-2018 IPR025921 HmuY protein ambt_08035 aab1a59dfdf71b4a23c43178f29c659e 493 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 9 478 1.5E-138 T 13-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 ambt_08035 aab1a59dfdf71b4a23c43178f29c659e 493 Pfam PF03553 Na+/H+ antiporter family 167 474 2.0E-58 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 ambt_15420 72864e7ca64d4d3d21e03bd36aa00361 361 Gene3D G3DSA:1.10.10.60 260 353 6.5E-9 T 13-10-2018 ambt_08920 79c2670dae56ac9ee04092e4ad951f27 238 Pfam PF11306 Protein of unknown function (DUF3108) 17 235 5.4E-14 T 13-10-2018 IPR021457 Protein of unknown function DUF3108 ambt_17710 6f5054ca0bfa0dafd9820430a280e0c6 101 Pfam PF07178 TraL protein 7 64 5.9E-5 T 13-10-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 ambt_20960 1cc353762a12129ba78dc67e0b07698f 271 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 35 142 1.2E-21 T 13-10-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 ambt_04920 3f5ba77410f75099392951ddf92f0ec4 562 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 64 224 7.0E-16 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like ambt_02015 279888b17f506e4f24a2193e964b4bc3 284 SUPERFAMILY SSF143422 13 167 1.7E-17 T 13-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 ambt_10320 14b57cd635f170fd4d7b5549c6c6286d 386 SUPERFAMILY SSF103473 26 380 1.44E-20 T 13-10-2018 IPR036259 MFS transporter superfamily ambt_10320 14b57cd635f170fd4d7b5549c6c6286d 386 Pfam PF07690 Major Facilitator Superfamily 228 384 3.4E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ambt_10320 14b57cd635f170fd4d7b5549c6c6286d 386 Gene3D G3DSA:1.20.1250.20 26 382 5.6E-14 T 13-10-2018 ambt_11595 c413f587f53e3e5a968271d6bbfd8a23 223 Gene3D G3DSA:2.160.20.20 15 220 1.6E-5 T 13-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily ambt_15935 80c0c17ffc77c58e4e2b7472a7e176fc 126 Pfam PF04219 Protein of unknown function, DUF 14 100 1.9E-29 T 13-10-2018 IPR007335 Protein of unknown function DUF413 ambt_08305 66ed51d6e48a9d2f331fd798a1df7a7a 230 Pfam PF01810 LysE type translocator 16 229 1.0E-24 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ambt_13540 37380abb0cd9009189032df859c8ea81 163 Pfam PF02169 LPP20 lipoprotein 38 140 8.1E-12 T 13-10-2018 IPR024952 Lipoprotein LPP20-like ambt_13540 37380abb0cd9009189032df859c8ea81 163 PIRSF PIRSF028687 10 163 5.1E-44 T 13-10-2018 IPR007293 Flagellar protein FlgP ambt_08495 803ef3574822b7b4a893c1f9f4432916 75 Pfam PF06305 Lipopolysaccharide assembly protein A domain 13 74 1.2E-15 T 13-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 ambt_19210 178e283edfb455c6b7b63b2c871b21df 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 13 326 8.5E-78 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ambt_11270 50ca9123bc2f5cb40125e3076816aa68 592 Gene3D G3DSA:2.60.120.260 7 136 1.3E-6 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily ambt_17715 bd10024b813822cf50e76f7bfcf28f67 229 Pfam PF05309 TraE protein 18 179 1.4E-19 T 13-10-2018 IPR007973 Pilus assembly TraE GO:0000746 ambt_12395 6c59f966f5508f68215f8d6c686f9827 617 Pfam PF05960 Bacterial protein of unknown function (DUF885) 65 607 3.6E-178 T 13-10-2018 IPR010281 Protein of unknown function DUF885 ambt_17725 54e013c940fb96fdc4b5340bc2b36eeb 459 Pfam PF03743 Bacterial conjugation TrbI-like protein 251 454 1.6E-28 T 13-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI ambt_12605 03d57e16d71d28d5f779c040fe3fabc1 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 3 51 4.7E-14 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain ambt_12605 03d57e16d71d28d5f779c040fe3fabc1 64 Gene3D G3DSA:1.10.10.1100 1 57 4.0E-20 T 13-10-2018 ambt_00735 71d7ac30862def33887970bbb7281dee 251 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 2 251 4.3E-84 T 13-10-2018 IPR026387 Outer membrane protein ambt_05110 7f2f419fc429adfaba80d2daf2ee9f82 203 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 184 1.4E-28 T 13-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 ambt_05110 7f2f419fc429adfaba80d2daf2ee9f82 203 PIRSF PIRSF011489 1 194 8.4E-50 T 13-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 ambt_16155 77c2b8a3b585cc34342ad76cd6aa257c 194 Pfam PF05137 Fimbrial assembly protein (PilN) 101 176 8.7E-19 T 13-10-2018 IPR007813 Fimbrial assembly PilN ambt_13940 f165cc729250bf865be30c34b3eff57f 862 Pfam PF02120 Flagellar hook-length control protein FliK 771 844 4.8E-9 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal ambt_01050 7fb455491055724e5e893dc4d915ee0a 392 Pfam PF04116 Fatty acid hydroxylase superfamily 172 325 1.2E-19 T 13-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 ambt_00315 3a3817137270999983b027ef85272828 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 1.4E-34 T 13-10-2018 IPR019886 Sodium symporter small subunit, predicted ambt_00315 3a3817137270999983b027ef85272828 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 4.4E-33 T 13-10-2018 IPR019886 Sodium symporter small subunit, predicted ambt_11845 c2140c4677b50a3b8b7723a748f49e5f 173 Pfam PF11157 Protein of unknown function (DUF2937) 2 161 5.3E-47 T 13-10-2018 IPR022584 Protein of unknown function DUF2937 ambt_12370 c4073245f6b255fc652648092df0d32f 320 Pfam PF01882 Protein of unknown function DUF58 57 141 5.0E-21 T 13-10-2018 IPR002881 Domain of unknown function DUF58 ambt_04725 a7c0d3d90928ac7151eefacccf028350 302 Pfam PF01925 Sulfite exporter TauE/SafE 43 297 1.5E-38 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ambt_03550 fee8927e0200fc5cdc9190dbad842f70 560 SUPERFAMILY SSF56935 430 558 7.69E-6 T 13-10-2018 ambt_02730 d2495264ac993dcb7249556c6482055b 364 Pfam PF14240 YHYH protein 314 353 6.8E-6 T 13-10-2018 IPR025924 YHYH domain ambt_02730 d2495264ac993dcb7249556c6482055b 364 Pfam PF14240 YHYH protein 177 306 8.2E-14 T 13-10-2018 IPR025924 YHYH domain ambt_10200 9d54ffdcf53f64f98b99b9757895d348 446 Pfam PF03553 Na+/H+ antiporter family 15 220 3.1E-14 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 ambt_10200 9d54ffdcf53f64f98b99b9757895d348 446 Pfam PF03553 Na+/H+ antiporter family 244 428 2.4E-9 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 ambt_04785 3a5c16a24b4fffbac193f660d64cf446 164 PIRSF PIRSF006173 1 160 8.7E-53 T 13-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 ambt_04785 3a5c16a24b4fffbac193f660d64cf446 164 Pfam PF03692 Putative zinc- or iron-chelating domain 23 103 4.0E-7 T 13-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein ambt_09380 f0d8f4406f90beffeb35dd2dec93480d 133 Pfam PF09685 Domain of unknown function (DUF4870) 27 132 6.1E-30 T 13-10-2018 IPR019109 Protein of unknown function DUF4870 ambt_00490 0e8a62aa45d589b04f61744688f942eb 87 Pfam PF07866 Protein of unknown function (DUF1653) 16 75 6.2E-26 T 13-10-2018 IPR023387 DUF1653-like domain ambt_00490 0e8a62aa45d589b04f61744688f942eb 87 Gene3D G3DSA:2.30.30.320 7 86 5.6E-29 T 13-10-2018 IPR037135 DUF1653-like domain superfamily ambt_09245 1bf73480c7b158be67f04bf89936bd4a 105 Pfam PF12514 Protein of unknown function (DUF3718) 39 103 3.8E-6 T 13-10-2018 IPR022193 Protein of unknown function DUF3718 ambt_03780 66ff39fe3ab7dd61df4ccafd7e1030bf 226 Pfam PF04012 PspA/IM30 family 2 222 5.9E-37 T 13-10-2018 IPR007157 PspA/IM30 ambt_04720 b29799c31c0b454002711c3497ce5600 149 Pfam PF10003 Integral membrane protein (DUF2244) 3 135 4.5E-33 T 13-10-2018 IPR019253 Protein of unknown function DUF2244, transmembrane ambt_17290 24fb673d92be9842dd948c38b93c2b2f 61 Pfam PF07277 SapC 2 41 1.0E-7 T 13-10-2018 IPR010836 SapC ambt_10520 65bc3c912b1b8f18eda786da7ae3a0f6 140 Pfam PF10129 OpgC protein 1 134 5.5E-21 T 13-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC ambt_03360 53a34d37550fe83ff00502796af50023 171 Pfam PF06127 Protein of unknown function (DUF962) 1 151 4.5E-24 T 13-10-2018 IPR009305 Protein of unknown function DUF962 ambt_14525 eb0cf8633e5ced85f3c1bb16d4a6c88a 145 Pfam PF06295 Protein of unknown function (DUF1043) 7 134 2.9E-23 T 13-10-2018 IPR009386 Protein of unknown function DUF1043 ambt_20590 d87c5c67ac8d0951daabae0d65ed5a10 94 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 90 1.1E-32 T 13-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 ambt_09295 704368e5df9312dc6dea38c6ae8af747 316 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 49 288 1.1E-57 T 13-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related ambt_08715 9ade15ac887dc033b0684cb336eeae3a 243 Pfam PF02517 CAAX protease self-immunity 135 218 8.5E-17 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 ambt_01020 e6d2c5b80dfda646da6d91480fcce90d 309 Pfam PF00092 von Willebrand factor type A domain 81 229 2.2E-8 T 13-10-2018 IPR002035 von Willebrand factor, type A ambt_01020 e6d2c5b80dfda646da6d91480fcce90d 309 SUPERFAMILY SSF53300 75 188 4.75E-11 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_01020 e6d2c5b80dfda646da6d91480fcce90d 309 Gene3D G3DSA:3.40.50.410 70 261 4.2E-11 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ambt_10185 52fccee1451a3c6f1fa781ad9950148e 84 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 9.8E-24 T 13-10-2018 IPR018638 Domain of unknown function DUF2061, membrane ambt_03135 be40d047507c0b69121bd000f1751aef 199 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 7.2E-21 T 13-10-2018 IPR009921 Domain of unknown function DUF1456 ambt_03135 be40d047507c0b69121bd000f1751aef 199 Pfam PF07308 Protein of unknown function (DUF1456) 88 154 2.8E-21 T 13-10-2018 IPR009921 Domain of unknown function DUF1456 ambt_07545 de654ccddc339f4c9fb6d3f5345d2880 140 Pfam PF11911 Protein of unknown function (DUF3429) 2 136 1.3E-24 T 13-10-2018 IPR021836 Protein of unknown function DUF3429 ambt_06160 8b5a2882814085e394e77e5255095167 114 Pfam PF01609 Transposase DDE domain 11 77 2.0E-9 T 13-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ambt_06020 4c129ba3b046c3647fd60934208b1d5f 116 Pfam PF11042 Protein of unknown function (DUF2750) 18 115 1.8E-30 T 13-10-2018 IPR021284 Protein of unknown function DUF2750 ambt_03840 416731669c3a5fb17d9d3eeb6a8a145a 428 Pfam PF01757 Acyltransferase family 14 377 1.3E-17 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ambt_18780 b5228c833e7b196fa585273e8781755e 111 Pfam PF08850 Domain of unknown function (DUF1820) 7 103 9.2E-41 T 13-10-2018 IPR014949 Protein of unknown function DUF1820 ambt_16425 d38e89c8e4c4940c15790f71d4f721fb 634 SUPERFAMILY SSF56349 309 479 8.83E-8 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ambt_13405 df2e02da760d779ce47c4f3c268313dc 323 Pfam PF11380 Stealth protein CR2, conserved region 2 49 155 1.1E-34 T 13-10-2018 IPR021520 Stealth protein CR2, conserved region 2 GO:0016772 ambt_18240 bac8f764688da1ef0e22db3e100a9e13 199 SUPERFAMILY SSF56925 42 171 5.02E-6 T 13-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ambt_04705 114c6e4375fc9b4a50ee4367cf07ddca 190 Pfam PF04366 Las17-binding protein actin regulator 102 190 5.9E-9 T 13-10-2018 IPR007461 Ysc84 actin-binding domain ambt_21275 99a2051d0efcce18eb2e776ca2e1209b 284 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 281 1.4E-18 T 13-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ambt_04965 1e140ce3485ec05784c51d97040faa41 382 Pfam PF00487 Fatty acid desaturase 92 362 1.9E-26 T 13-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ambt_07410 e15ef10e60b3c1e9b9b68177f127c71b 209 Pfam PF11740 Plasmid replication region DNA-binding N-term 9 125 4.8E-16 T 13-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain ambt_15805 25c4470b1817bca52922af1e5a1c89d7 60 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 58 2.5E-20 T 13-10-2018 IPR019201 Protein of unknown function DUF2065 ambt_06300 f8382ee42030a1699e82c66f21772913 140 Gene3D G3DSA:2.170.150.70 5 120 1.9E-9 T 13-10-2018 ambt_06300 f8382ee42030a1699e82c66f21772913 140 SUPERFAMILY SSF51316 3 87 2.93E-7 T 13-10-2018 IPR011057 Mss4-like superfamily ambt_06915 18f046ba578b27b404a36e76db856665 96 Pfam PF11804 Protein of unknown function (DUF3325) 4 93 1.6E-7 T 13-10-2018 IPR021762 Protein of unknown function DUF3325 ambt_14055 a8e7494fe417e768c893981ded19c4be 269 Pfam PF11101 Protein of unknown function (DUF2884) 30 260 1.3E-70 T 13-10-2018 IPR021307 Protein of unknown function DUF2884 ambt_09620 8e9032c21c3a5d647963806e54d9c715 149 Pfam PF04217 Protein of unknown function, DUF412 6 144 1.1E-55 T 13-10-2018 IPR007334 Uncharacterised protein family UPF0208 ambt_08250 48fb73eb731b6fed1ef3a39a263268c7 159 Pfam PF05751 FixH 7 147 1.4E-40 T 13-10-2018 IPR008620 Nitrogen fixation protein FixH ambt_09070 991fca8c3cf03197df55d40013e06476 274 Pfam PF05742 Transport and Golgi organisation 2 21 260 4.6E-72 T 13-10-2018 IPR008551 Transport and Golgi organisation protein 2 ambt_00615 747518c49c15ff9eb2f3454e223b3d18 618 SUPERFAMILY SSF56300 115 511 2.82E-11 T 13-10-2018