locus-tag class description IUA53_00005 PF11638 DnaA N-terminal domain IUA53_00005 PF08299 Bacterial dnaA protein helix-turn-helix IUA53_00005 PF00308 Bacterial dnaA protein IUA53_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain IUA53_00010 PF02767 DNA polymerase III beta subunit, central domain IUA53_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain IUA53_00015 PF02463 RecF/RecN/SMC N terminal domain IUA53_00020 PF00986 DNA gyrase B subunit, carboxyl terminus IUA53_00020 PF00204 DNA gyrase B IUA53_00020 PF18053 DNA gyrase B subunit insert domain IUA53_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_00020 PF01751 Toprim domain IUA53_00030 PF05746 DALR anticodon binding domain IUA53_00030 PF02092 Glycyl-tRNA synthetase beta subunit IUA53_00035 PF02091 Glycyl-tRNA synthetase alpha subunit IUA53_00040 PF03352 Methyladenine glycosylase IUA53_00050 PF04220 Der GTPase activator (YihI) IUA53_00060 PF00034 Cytochrome c IUA53_00065 PF01926 50S ribosome-binding GTPase IUA53_00070 PF01612 3'-5' exonuclease IUA53_00070 PF00476 DNA polymerase family A IUA53_00070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IUA53_00070 PF01367 5'-3' exonuclease, C-terminal SAM fold IUA53_00080 PF02386 Cation transport protein IUA53_00085 PF02254 TrkA-N domain IUA53_00085 PF02080 TrkA-C domain IUA53_00090 PF01189 16S rRNA methyltransferase RsmB/F IUA53_00090 PF01029 NusB family IUA53_00095 PF02911 Formyl transferase, C-terminal domain IUA53_00095 PF00551 Formyl transferase IUA53_00100 PF01327 Polypeptide deformylase IUA53_00105 PF01476 LysM domain IUA53_00110 PF02481 DNA recombination-mediator protein A IUA53_00110 PF17782 DprA winged helix domain IUA53_00115 PF04361 Protein of unknown function (DUF494) IUA53_00125 PF01300 Telomere recombination IUA53_00130 PF01218 Coproporphyrinogen III oxidase IUA53_00135 PF03922 OmpW family IUA53_00145 PF01488 Shikimate / quinate 5-dehydrogenase IUA53_00145 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IUA53_00145 PF08501 Shikimate dehydrogenase substrate binding domain IUA53_00150 PF00132 Bacterial transferase hexapeptide (six repeats) IUA53_00190 PF07733 Bacterial DNA polymerase III alpha NTPase domain IUA53_00190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IUA53_00190 PF02811 PHP domain IUA53_00190 PF14579 Helix-hairpin-helix motif IUA53_00190 PF01336 OB-fold nucleic acid binding domain IUA53_00220 PF04389 Peptidase family M28 IUA53_00220 PF02225 PA domain IUA53_00225 PF01467 Cytidylyltransferase-like IUA53_00230 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase IUA53_00235 PF00440 Bacterial regulatory proteins, tetR family IUA53_00240 PF02441 Flavoprotein IUA53_00240 PF04127 DNA / pantothenate metabolism flavoprotein IUA53_00245 PF04002 RadC-like JAB domain IUA53_00265 PF06082 Exopolysaccharide biosynthesis protein YbjH IUA53_00270 PF00830 Ribosomal L28 family IUA53_00275 PF00471 Ribosomal protein L33 IUA53_00285 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IUA53_00285 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IUA53_00285 PF06827 Zinc finger found in FPG and IleRS IUA53_00290 PF01467 Cytidylyltransferase-like IUA53_00300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IUA53_00315 PF03707 Bacterial signalling protein N terminal repeat IUA53_00315 PF00990 Diguanylate cyclase, GGDEF domain IUA53_00315 PF00563 EAL domain IUA53_00320 PF00155 Aminotransferase class I and II IUA53_00325 PF08240 Alcohol dehydrogenase GroES-like domain IUA53_00325 PF00107 Zinc-binding dehydrogenase IUA53_00330 PF00581 Rhodanese-like domain IUA53_00335 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease IUA53_00335 PF01694 Rhomboid family IUA53_00345 PF04345 Chorismate lyase IUA53_00350 PF01040 UbiA prenyltransferase family IUA53_00355 PF04380 Membrane fusogenic activity IUA53_00360 PF13361 UvrD-like helicase C-terminal domain IUA53_00360 PF00580 UvrD/REP helicase N-terminal domain IUA53_00365 PF00563 EAL domain IUA53_00365 PF00990 Diguanylate cyclase, GGDEF domain IUA53_00365 PF03707 Bacterial signalling protein N terminal repeat IUA53_00370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IUA53_00405 PF00145 C-5 cytosine-specific DNA methylase IUA53_00410 PF02151 UvrB/uvrC motif IUA53_00410 PF12344 Ultra-violet resistance protein B IUA53_00410 PF17757 UvrB interaction domain IUA53_00410 PF04851 Type III restriction enzyme, res subunit IUA53_00410 PF00271 Helicase conserved C-terminal domain IUA53_00420 PF13533 Biotin-lipoyl like IUA53_00425 PF00005 ABC transporter IUA53_00435 PF00593 TonB dependent receptor IUA53_00435 PF07715 TonB-dependent Receptor Plug Domain IUA53_00440 PF00593 TonB dependent receptor IUA53_00440 PF07715 TonB-dependent Receptor Plug Domain IUA53_00445 PF13006 Insertion element 4 transposase N-terminal IUA53_00445 PF01609 Transposase DDE domain IUA53_00450 PF02770 Acyl-CoA dehydrogenase, middle domain IUA53_00450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUA53_00450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUA53_00455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_00455 PF03466 LysR substrate binding domain IUA53_00460 PF00753 Metallo-beta-lactamase superfamily IUA53_00465 PF04317 YcjX-like family, DUF463 IUA53_00480 PF06968 Biotin and Thiamin Synthesis associated domain IUA53_00480 PF04055 Radical SAM superfamily IUA53_00485 PF05690 Thiazole biosynthesis protein ThiG IUA53_00495 PF00899 ThiF family IUA53_00500 PF02581 Thiamine monophosphate synthase IUA53_00505 PF13667 ThiC-associated domain IUA53_00505 PF01964 Radical SAM ThiC family IUA53_00510 PF07715 TonB-dependent Receptor Plug Domain IUA53_00510 PF00593 TonB dependent receptor IUA53_00525 PF00881 Nitroreductase family IUA53_00525 PF01996 F420-0:Gamma-glutamyl ligase IUA53_00530 PF01983 Guanylyl transferase CofC like IUA53_00535 PF01933 Uncharacterised protein family UPF0052 IUA53_00540 PF04055 Radical SAM superfamily IUA53_00545 PF04055 Radical SAM superfamily IUA53_00550 PF00440 Bacterial regulatory proteins, tetR family IUA53_00550 PF08362 YcdC-like protein, C-terminal region IUA53_00555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_00555 PF03466 LysR substrate binding domain IUA53_00560 PF00202 Aminotransferase class-III IUA53_00565 PF00171 Aldehyde dehydrogenase family IUA53_00570 PF01546 Peptidase family M20/M25/M40 IUA53_00570 PF07687 Peptidase dimerisation domain IUA53_00575 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IUA53_00580 PF01979 Amidohydrolase family IUA53_00585 PF07719 Tetratricopeptide repeat IUA53_00585 PF07219 HemY protein N-terminus IUA53_00590 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase IUA53_00595 PF02602 Uroporphyrinogen-III synthase HemD IUA53_00600 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IUA53_00600 PF03900 Porphobilinogen deaminase, C-terminal domain IUA53_00605 PF00990 Diguanylate cyclase, GGDEF domain IUA53_00605 PF00072 Response regulator receiver domain IUA53_00615 PF00625 Guanylate kinase IUA53_00620 PF01192 RNA polymerase Rpb6 IUA53_00625 PF04607 Region found in RelA / SpoT proteins IUA53_00625 PF13291 ACT domain IUA53_00625 PF02824 TGS domain IUA53_00630 PF01042 Endoribonuclease L-PSP IUA53_00635 PF00588 SpoU rRNA Methylase family IUA53_00635 PF12105 SpoU, rRNA methylase, C-terminal IUA53_00640 PF00271 Helicase conserved C-terminal domain IUA53_00640 PF17191 RecG wedge domain IUA53_00640 PF00270 DEAD/DEAH box helicase IUA53_00645 PF04445 Putative SAM-dependent methyltransferase IUA53_00650 PF08534 Redoxin IUA53_00665 PF00528 Binding-protein-dependent transport system inner membrane component IUA53_00670 PF00005 ABC transporter IUA53_00670 PF08402 TOBE domain IUA53_00675 PF00924 Mechanosensitive ion channel IUA53_00675 PF05552 Conserved TM helix IUA53_00685 PF08722 TnsA endonuclease N terminal IUA53_00685 PF08721 TnsA endonuclease C terminal IUA53_00690 PF00665 Integrase core domain IUA53_00695 PF13401 AAA domain IUA53_00695 PF11426 Tn7 transposition regulator TnsC IUA53_00740 PF08719 Domain of unknown function (DUF1768) IUA53_00760 PF00593 TonB dependent receptor IUA53_00770 PF01435 Peptidase family M48 IUA53_00775 PF00072 Response regulator receiver domain IUA53_00775 PF00486 Transcriptional regulatory protein, C terminal IUA53_00780 PF13181 Tetratricopeptide repeat IUA53_00785 PF00593 TonB dependent receptor IUA53_00785 PF07715 TonB-dependent Receptor Plug Domain IUA53_00790 PF00491 Arginase family IUA53_00805 PF00491 Arginase family IUA53_00810 PF00491 Arginase family IUA53_00815 PF00072 Response regulator receiver domain IUA53_00815 PF00989 PAS fold IUA53_00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_00815 PF01627 Hpt domain IUA53_00815 PF18415 Histidine kinase receptor ArcB trans-membrane domain IUA53_00815 PF00512 His Kinase A (phospho-acceptor) domain IUA53_00825 PF02653 Branched-chain amino acid transport system / permease component IUA53_00830 PF02653 Branched-chain amino acid transport system / permease component IUA53_00835 PF00005 ABC transporter IUA53_00835 PF12399 Branched-chain amino acid ATP-binding cassette transporter IUA53_00840 PF00005 ABC transporter IUA53_00845 PF01774 UreD urease accessory protein IUA53_00850 PF00547 Urease, gamma subunit IUA53_00855 PF00699 Urease beta subunit IUA53_00860 PF01979 Amidohydrolase family IUA53_00860 PF00449 Urease alpha-subunit, N-terminal domain IUA53_00865 PF02814 UreE urease accessory protein, N-terminal domain IUA53_00865 PF05194 UreE urease accessory protein, C-terminal domain IUA53_00870 PF01730 UreF IUA53_00875 PF02492 CobW/HypB/UreG, nucleotide-binding domain IUA53_00890 PF00990 Diguanylate cyclase, GGDEF domain IUA53_00900 PF03466 LysR substrate binding domain IUA53_00900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_00905 PF01810 LysE type translocator IUA53_00920 PF00529 HlyD membrane-fusion protein of T1SS IUA53_00920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUA53_00925 PF00873 AcrB/AcrD/AcrF family IUA53_00935 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IUA53_00935 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IUA53_00940 PF00850 Histone deacetylase domain IUA53_00955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_00955 PF00672 HAMP domain IUA53_00955 PF12729 Four helix bundle sensory module for signal transduction IUA53_00965 PF11737 Protein of unknown function (DUF3300) IUA53_00970 PF00925 GTP cyclohydrolase II IUA53_00975 PF00563 EAL domain IUA53_00975 PF00990 Diguanylate cyclase, GGDEF domain IUA53_00975 PF08448 PAS fold IUA53_00990 PF00570 HRDC domain IUA53_00990 PF00270 DEAD/DEAH box helicase IUA53_00990 PF16124 RecQ zinc-binding IUA53_00990 PF00271 Helicase conserved C-terminal domain IUA53_00990 PF09382 RQC domain IUA53_00995 PF03061 Thioesterase superfamily IUA53_01000 PF00571 CBS domain IUA53_01000 PF01769 Divalent cation transporter IUA53_01000 PF03448 MgtE intracellular N domain IUA53_01005 PF00892 EamA-like transporter family IUA53_01010 PF00072 Response regulator receiver domain IUA53_01010 PF00990 Diguanylate cyclase, GGDEF domain IUA53_01015 PF00580 UvrD/REP helicase N-terminal domain IUA53_01015 PF13361 UvrD-like helicase C-terminal domain IUA53_01020 PF00132 Bacterial transferase hexapeptide (six repeats) IUA53_01020 PF06426 Serine acetyltransferase, N-terminal IUA53_01025 PF13419 Haloacid dehalogenase-like hydrolase IUA53_01030 PF02899 Phage integrase, N-terminal SAM-like domain IUA53_01030 PF00589 Phage integrase family IUA53_01040 PF01678 Diaminopimelate epimerase IUA53_01045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IUA53_01045 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IUA53_01060 PF01569 PAP2 superfamily IUA53_01065 PF03737 Aldolase/RraA IUA53_01075 PF02441 Flavoprotein IUA53_01080 PF08245 Mur ligase middle domain IUA53_01080 PF02875 Mur ligase family, glutamate ligase domain IUA53_01080 PF01225 Mur ligase family, catalytic domain IUA53_01085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IUA53_01090 PF00719 Inorganic pyrophosphatase IUA53_01115 PF00005 ABC transporter IUA53_01115 PF17755 UvrA DNA-binding domain IUA53_01115 PF17760 UvrA interaction domain IUA53_01120 PF07690 Major Facilitator Superfamily IUA53_01125 PF13419 Haloacid dehalogenase-like hydrolase IUA53_01140 PF00356 Bacterial regulatory proteins, lacI family IUA53_01145 PF01263 Aldose 1-epimerase IUA53_01150 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IUA53_01150 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IUA53_01155 PF00288 GHMP kinases N terminal domain IUA53_01155 PF10509 Galactokinase galactose-binding signature IUA53_01155 PF08544 GHMP kinases C terminal IUA53_01160 PF00474 Sodium:solute symporter family IUA53_01165 PF00436 Single-strand binding protein family IUA53_01180 PF16874 Glycosyl hydrolase family 36 C-terminal domain IUA53_01180 PF16875 Glycosyl hydrolase family 36 N-terminal domain IUA53_01190 PF04820 Tryptophan halogenase IUA53_01195 PF00474 Sodium:solute symporter family IUA53_01205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IUA53_01205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IUA53_01210 PF00455 DeoR C terminal sensor domain IUA53_01210 PF08220 DeoR-like helix-turn-helix domain IUA53_01215 PF01266 FAD dependent oxidoreductase IUA53_01215 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IUA53_01235 PF04085 rod shape-determining protein MreC IUA53_01240 PF04093 rod shape-determining protein MreD IUA53_01245 PF02545 Maf-like protein IUA53_01250 PF10150 Ribonuclease E/G family IUA53_01250 PF00575 S1 RNA binding domain IUA53_01255 PF13502 AsmA-like C-terminal region IUA53_01255 PF13116 Protein of unknown function IUA53_01260 PF00795 Carbon-nitrogen hydrolase IUA53_01265 PF01523 Putative modulator of DNA gyrase IUA53_01270 PF04751 Protein of unknown function (DUF615) IUA53_01275 PF01523 Putative modulator of DNA gyrase IUA53_01285 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IUA53_01285 PF02929 Beta galactosidase small chain IUA53_01285 PF16353 Domain of unknown function(DUF4981) IUA53_01285 PF00703 Glycosyl hydrolases family 2 IUA53_01285 PF02837 Glycosyl hydrolases family 2, sugar binding domain IUA53_01290 PF00072 Response regulator receiver domain IUA53_01290 PF00486 Transcriptional regulatory protein, C terminal IUA53_01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_01295 PF00497 Bacterial extracellular solute-binding proteins, family 3 IUA53_01295 PF00512 His Kinase A (phospho-acceptor) domain IUA53_01300 PF08323 Starch synthase catalytic domain IUA53_01300 PF00534 Glycosyl transferases group 1 IUA53_01305 PF05175 Methyltransferase small domain IUA53_01305 PF08468 Methyltransferase small domain N-terminal IUA53_01310 PF02390 Putative methyltransferase IUA53_01320 PF00633 Helix-hairpin-helix motif IUA53_01320 PF00730 HhH-GPD superfamily base excision DNA repair protein IUA53_01320 PF14815 NUDIX domain IUA53_01325 PF04362 Bacterial Fe(2+) trafficking IUA53_01360 PF01420 Type I restriction modification DNA specificity domain IUA53_01365 PF02384 N-6 DNA Methylase IUA53_01365 PF12161 HsdM N-terminal domain IUA53_01370 PF08463 EcoEI R protein C-terminal IUA53_01370 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) IUA53_01370 PF00271 Helicase conserved C-terminal domain IUA53_01370 PF04851 Type III restriction enzyme, res subunit IUA53_01385 PF01131 DNA topoisomerase IUA53_01385 PF01751 Toprim domain IUA53_01385 PF01396 Topoisomerase DNA binding C4 zinc finger IUA53_01395 PF01693 Caulimovirus viroplasmin IUA53_01415 PF00589 Phage integrase family IUA53_01415 PF02899 Phage integrase, N-terminal SAM-like domain IUA53_01485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUA53_01485 PF00529 HlyD membrane-fusion protein of T1SS IUA53_01490 PF00873 AcrB/AcrD/AcrF family IUA53_01495 PF01545 Cation efflux family IUA53_01495 PF16916 Dimerisation domain of Zinc Transporter IUA53_01520 PF01219 Prokaryotic diacylglycerol kinase IUA53_01530 PF01695 IstB-like ATP binding protein IUA53_01535 PF00665 Integrase core domain IUA53_01555 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IUA53_01565 PF00535 Glycosyl transferase family 2 IUA53_01570 PF00486 Transcriptional regulatory protein, C terminal IUA53_01570 PF00072 Response regulator receiver domain IUA53_01575 PF00672 HAMP domain IUA53_01575 PF00512 His Kinase A (phospho-acceptor) domain IUA53_01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_01615 PF00551 Formyl transferase IUA53_01615 PF02911 Formyl transferase, C-terminal domain IUA53_01635 PF00376 MerR family regulatory protein IUA53_01635 PF09278 MerR, DNA binding IUA53_01640 PF00403 Heavy-metal-associated domain IUA53_01680 PF13520 Amino acid permease IUA53_01690 PF00394 Multicopper oxidase IUA53_01690 PF07731 Multicopper oxidase IUA53_01690 PF07732 Multicopper oxidase IUA53_01725 PF00873 AcrB/AcrD/AcrF family IUA53_01740 PF01435 Peptidase family M48 IUA53_01760 PF08787 Alginate lyase IUA53_01770 PF08279 HTH domain IUA53_01770 PF13280 WYL domain IUA53_01775 PF01266 FAD dependent oxidoreductase IUA53_01780 PF00593 TonB dependent receptor IUA53_01780 PF07715 TonB-dependent Receptor Plug Domain IUA53_01790 PF00672 HAMP domain IUA53_01790 PF16750 Sensor domain of 2-component histidine kinase IUA53_01790 PF00512 His Kinase A (phospho-acceptor) domain IUA53_01790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_01795 PF00072 Response regulator receiver domain IUA53_01795 PF00486 Transcriptional regulatory protein, C terminal IUA53_01800 PF02743 Cache domain IUA53_01800 PF00672 HAMP domain IUA53_01800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_01805 PF00072 Response regulator receiver domain IUA53_01810 PF01627 Hpt domain IUA53_01810 PF02895 Signal transducing histidine kinase, homodimeric domain IUA53_01810 PF09078 CheY binding IUA53_01810 PF01584 CheW-like domain IUA53_01810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_01815 PF01584 CheW-like domain IUA53_01820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_01820 PF13426 PAS domain IUA53_01820 PF08447 PAS fold IUA53_01825 PF03705 CheR methyltransferase, all-alpha domain IUA53_01825 PF01739 CheR methyltransferase, SAM binding domain IUA53_01830 PF03975 CheD chemotactic sensory transduction IUA53_01835 PF01339 CheB methylesterase IUA53_01835 PF00072 Response regulator receiver domain IUA53_01860 PF00072 Response regulator receiver domain IUA53_01865 PF01258 Prokaryotic dksA/traR C4-type zinc finger IUA53_01880 PF00356 Bacterial regulatory proteins, lacI family IUA53_01885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IUA53_01885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IUA53_01895 PF03825 Nucleoside H+ symporter IUA53_01905 PF05199 GMC oxidoreductase IUA53_01905 PF00732 GMC oxidoreductase IUA53_01920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IUA53_01925 PF00248 Aldo/keto reductase family IUA53_01930 PF08212 Lipocalin-like domain IUA53_01940 PF01979 Amidohydrolase family IUA53_01945 PF00270 DEAD/DEAH box helicase IUA53_01945 PF00271 Helicase conserved C-terminal domain IUA53_01945 PF03880 DbpA RNA binding domain IUA53_01955 PF01431 Peptidase family M13 IUA53_01955 PF05649 Peptidase family M13 IUA53_01960 PF03737 Aldolase/RraA IUA53_01965 PF00080 Copper/zinc superoxide dismutase (SODC) IUA53_01970 PF00563 EAL domain IUA53_01970 PF08668 HDOD domain IUA53_01975 PF00005 ABC transporter IUA53_01975 PF00664 ABC transporter transmembrane region IUA53_01985 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IUA53_01990 PF02357 Transcription termination factor nusG IUA53_01990 PF00467 KOW motif IUA53_02000 PF03946 Ribosomal protein L11, N-terminal domain IUA53_02000 PF00298 Ribosomal protein L11, RNA binding domain IUA53_02005 PF00687 Ribosomal protein L1p/L10e family IUA53_02010 PF00466 Ribosomal protein L10 IUA53_02015 PF16320 Ribosomal protein L7/L12 dimerisation domain IUA53_02015 PF00542 Ribosomal protein L7/L12 C-terminal domain IUA53_02020 PF04560 RNA polymerase Rpb2, domain 7 IUA53_02020 PF10385 RNA polymerase beta subunit external 1 domain IUA53_02020 PF04565 RNA polymerase Rpb2, domain 3 IUA53_02020 PF04563 RNA polymerase beta subunit IUA53_02020 PF00562 RNA polymerase Rpb2, domain 6 IUA53_02020 PF04561 RNA polymerase Rpb2, domain 2 IUA53_02025 PF04997 RNA polymerase Rpb1, domain 1 IUA53_02025 PF00623 RNA polymerase Rpb1, domain 2 IUA53_02025 PF04983 RNA polymerase Rpb1, domain 3 IUA53_02025 PF05000 RNA polymerase Rpb1, domain 4 IUA53_02025 PF04998 RNA polymerase Rpb1, domain 5 IUA53_02030 PF00164 Ribosomal protein S12/S23 IUA53_02035 PF00177 Ribosomal protein S7p/S5e IUA53_02040 PF14492 Elongation Factor G, domain II IUA53_02040 PF03764 Elongation factor G, domain IV IUA53_02040 PF00009 Elongation factor Tu GTP binding domain IUA53_02040 PF03144 Elongation factor Tu domain 2 IUA53_02040 PF00679 Elongation factor G C-terminus IUA53_02045 PF00009 Elongation factor Tu GTP binding domain IUA53_02045 PF03144 Elongation factor Tu domain 2 IUA53_02045 PF03143 Elongation factor Tu C-terminal domain IUA53_02050 PF07859 alpha/beta hydrolase fold IUA53_02060 PF02554 Carbon starvation protein CstA IUA53_02060 PF13722 5TM C-terminal transporter carbon starvation CstA IUA53_02065 PF03773 Predicted permease IUA53_02070 PF01595 Cyclin M transmembrane N-terminal domain IUA53_02070 PF00571 CBS domain IUA53_02085 PF18331 PKHD-type hydroxylase C-terminal domain IUA53_02085 PF13640 2OG-Fe(II) oxygenase superfamily IUA53_02090 PF07715 TonB-dependent Receptor Plug Domain IUA53_02090 PF00593 TonB dependent receptor IUA53_02095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_02095 PF00672 HAMP domain IUA53_02095 PF00512 His Kinase A (phospho-acceptor) domain IUA53_02100 PF00486 Transcriptional regulatory protein, C terminal IUA53_02100 PF00072 Response regulator receiver domain IUA53_02105 PF00005 ABC transporter IUA53_02110 PF01061 ABC-2 type transporter IUA53_02120 PF00282 Pyridoxal-dependent decarboxylase conserved domain IUA53_02125 PF02569 Pantoate-beta-alanine ligase IUA53_02130 PF02548 Ketopantoate hydroxymethyltransferase IUA53_02135 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IUA53_02140 PF12627 Probable RNA and SrmB- binding site of polymerase A IUA53_02140 PF12626 Polymerase A arginine-rich C-terminus IUA53_02140 PF01743 Poly A polymerase head domain IUA53_02145 PF00749 tRNA synthetases class I (E and Q), catalytic domain IUA53_02150 PF01258 Prokaryotic dksA/traR C4-type zinc finger IUA53_02155 PF17746 SfsA N-terminal OB domain IUA53_02155 PF03749 Sugar fermentation stimulation protein RE domain IUA53_02160 PF00883 Cytosol aminopeptidase family, catalytic domain IUA53_02160 PF12404 Peptidase IUA53_02170 PF01914 MarC family integral membrane protein IUA53_02175 PF04222 Protein of unknown function (DUF416) IUA53_02185 PF00448 SRP54-type protein, GTPase domain IUA53_02185 PF02881 SRP54-type protein, helical bundle domain IUA53_02190 PF00005 ABC transporter IUA53_02195 PF18075 FtsX extracellular domain IUA53_02200 PF08668 HDOD domain IUA53_02200 PF00563 EAL domain IUA53_02205 PF08668 HDOD domain IUA53_02205 PF00563 EAL domain IUA53_02210 PF04542 Sigma-70 region 2 IUA53_02210 PF04545 Sigma-70, region 4 IUA53_02210 PF00140 Sigma-70 factor, region 1.2 IUA53_02215 PF00583 Acetyltransferase (GNAT) family IUA53_02215 PF09500 Putative thioesterase (yiiD_Cterm) IUA53_02220 PF02580 D-Tyr-tRNA(Tyr) deacylase IUA53_02225 PF00561 alpha/beta hydrolase fold IUA53_02240 PF03631 Virulence factor BrkB IUA53_02245 PF02219 Methylenetetrahydrofolate reductase IUA53_02250 PF01340 Met Apo-repressor, MetJ IUA53_02255 PF00390 Malic enzyme, N-terminal domain IUA53_02255 PF03949 Malic enzyme, NAD binding domain IUA53_02265 PF01197 Ribosomal protein L31 IUA53_02270 PF00270 DEAD/DEAH box helicase IUA53_02270 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IUA53_02270 PF18074 Primosomal protein N C-terminal domain IUA53_02270 PF17764 3′ DNA-binding domain (3′BD) IUA53_02270 PF00271 Helicase conserved C-terminal domain IUA53_02275 PF05036 Sporulation related domain IUA53_02280 PF00227 Proteasome subunit IUA53_02285 PF00004 ATPase family associated with various cellular activities (AAA) IUA53_02285 PF07724 AAA domain (Cdc48 subfamily) IUA53_02300 PF00072 Response regulator receiver domain IUA53_02300 PF00196 Bacterial regulatory proteins, luxR family IUA53_02320 PF07676 WD40-like Beta Propeller Repeat IUA53_02320 PF00326 Prolyl oligopeptidase family IUA53_02325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUA53_02325 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_02330 PF00072 Response regulator receiver domain IUA53_02330 PF02954 Bacterial regulatory protein, Fis family IUA53_02330 PF00158 Sigma-54 interaction domain IUA53_02335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_02335 PF00497 Bacterial extracellular solute-binding proteins, family 3 IUA53_02335 PF00512 His Kinase A (phospho-acceptor) domain IUA53_02345 PF00072 Response regulator receiver domain IUA53_02350 PF01432 Peptidase family M3 IUA53_02360 PF01209 ubiE/COQ5 methyltransferase family IUA53_02370 PF03109 ABC1 family IUA53_02375 PF00313 'Cold-shock' DNA-binding domain IUA53_02385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_02385 PF00672 HAMP domain IUA53_02385 PF12729 Four helix bundle sensory module for signal transduction IUA53_02390 PF02322 Cytochrome bd terminal oxidase subunit II IUA53_02395 PF01654 Cytochrome bd terminal oxidase subunit I IUA53_02430 PF04389 Peptidase family M28 IUA53_02440 PF00970 Oxidoreductase FAD-binding domain IUA53_02440 PF00175 Oxidoreductase NAD-binding domain IUA53_02445 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IUA53_02455 PF08238 Sel1 repeat IUA53_02465 PF16655 PhoD-like phosphatase, N-terminal domain IUA53_02465 PF09423 PhoD-like phosphatase IUA53_02470 PF08461 Ribonuclease R winged-helix domain IUA53_02470 PF17876 Cold shock domain IUA53_02470 PF08206 Ribonuclease B OB domain IUA53_02470 PF00773 RNB domain IUA53_02470 PF00575 S1 RNA binding domain IUA53_02475 PF00588 SpoU rRNA Methylase family IUA53_02475 PF08032 RNA 2'-O ribose methyltransferase substrate binding IUA53_02485 PF09308 LuxQ, periplasmic IUA53_02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_02485 PF00512 His Kinase A (phospho-acceptor) domain IUA53_02485 PF00072 Response regulator receiver domain IUA53_02490 PF00238 Ribosomal protein L14p/L23e IUA53_02495 PF00467 KOW motif IUA53_02495 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IUA53_02500 PF00281 Ribosomal protein L5 IUA53_02500 PF00673 ribosomal L5P family C-terminus IUA53_02505 PF00253 Ribosomal protein S14p/S29e IUA53_02510 PF00410 Ribosomal protein S8 IUA53_02515 PF00347 Ribosomal protein L6 IUA53_02520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IUA53_02525 PF03719 Ribosomal protein S5, C-terminal domain IUA53_02525 PF00333 Ribosomal protein S5, N-terminal domain IUA53_02530 PF00327 Ribosomal protein L30p/L7e IUA53_02535 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IUA53_02540 PF00344 SecY translocase IUA53_02545 PF00444 Ribosomal protein L36 IUA53_02550 PF00416 Ribosomal protein S13/S18 IUA53_02555 PF00411 Ribosomal protein S11 IUA53_02560 PF01479 S4 domain IUA53_02560 PF00163 Ribosomal protein S4/S9 N-terminal domain IUA53_02565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IUA53_02565 PF01000 RNA polymerase Rpb3/RpoA insert domain IUA53_02565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IUA53_02570 PF01196 Ribosomal protein L17 IUA53_02575 PF00700 Bacterial flagellin C-terminal helical region IUA53_02575 PF07196 Flagellin hook IN motif IUA53_02575 PF00669 Bacterial flagellin N-terminal helical region IUA53_02585 PF01050 Mannose-6-phosphate isomerase IUA53_02585 PF00483 Nucleotidyl transferase IUA53_02625 PF00534 Glycosyl transferases group 1 IUA53_02625 PF13579 Glycosyl transferase 4-like domain IUA53_02660 PF00483 Nucleotidyl transferase IUA53_02665 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IUA53_02670 PF04321 RmlD substrate binding domain IUA53_02675 PF16363 GDP-mannose 4,6 dehydratase IUA53_02680 PF00535 Glycosyl transferase family 2 IUA53_02685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IUA53_02685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IUA53_02685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IUA53_02695 PF00535 Glycosyl transferase family 2 IUA53_02695 PF01501 Glycosyl transferase family 8 IUA53_02710 PF00535 Glycosyl transferase family 2 IUA53_02715 PF00535 Glycosyl transferase family 2 IUA53_02745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_02745 PF03466 LysR substrate binding domain IUA53_02750 PF00664 ABC transporter transmembrane region IUA53_02750 PF03412 Peptidase C39 family IUA53_02750 PF00005 ABC transporter IUA53_02795 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IUA53_02795 PF01565 FAD binding domain IUA53_02800 PF08279 HTH domain IUA53_02800 PF03099 Biotin/lipoate A/B protein ligase family IUA53_02800 PF02237 Biotin protein ligase C terminal domain IUA53_02805 PF03309 Type III pantothenate kinase IUA53_02830 PF03144 Elongation factor Tu domain 2 IUA53_02830 PF00009 Elongation factor Tu GTP binding domain IUA53_02830 PF03143 Elongation factor Tu C-terminal domain IUA53_02840 PF06628 Catalase-related immune-responsive IUA53_02840 PF00199 Catalase IUA53_02855 PF00248 Aldo/keto reductase family IUA53_02860 PF02690 Na+/Pi-cotransporter IUA53_02870 PF13193 AMP-binding enzyme C-terminal domain IUA53_02870 PF00501 AMP-binding enzyme IUA53_02870 PF16177 Acetyl-coenzyme A synthetase N-terminus IUA53_02875 PF00196 Bacterial regulatory proteins, luxR family IUA53_02875 PF00072 Response regulator receiver domain IUA53_02885 PF08443 RimK-like ATP-grasp domain IUA53_02885 PF18030 RimK PreATP-grasp domain IUA53_02895 PF18030 RimK PreATP-grasp domain IUA53_02895 PF08443 RimK-like ATP-grasp domain IUA53_02905 PF00989 PAS fold IUA53_02905 PF00072 Response regulator receiver domain IUA53_02905 PF00512 His Kinase A (phospho-acceptor) domain IUA53_02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_02905 PF01627 Hpt domain IUA53_02905 PF18415 Histidine kinase receptor ArcB trans-membrane domain IUA53_02915 PF00474 Sodium:solute symporter family IUA53_02920 PF00571 CBS domain IUA53_02920 PF01380 SIS domain IUA53_02945 PF07662 Na+ dependent nucleoside transporter C-terminus IUA53_02945 PF01773 Na+ dependent nucleoside transporter N-terminus IUA53_02945 PF07670 Nucleoside recognition IUA53_02950 PF00485 Phosphoribulokinase / Uridine kinase family IUA53_02965 PF00593 TonB dependent receptor IUA53_02980 PF07715 TonB-dependent Receptor Plug Domain IUA53_02980 PF00593 TonB dependent receptor IUA53_02985 PF02863 Arginine repressor, C-terminal domain IUA53_02985 PF01316 Arginine repressor, DNA binding domain IUA53_02990 PF00056 lactate/malate dehydrogenase, NAD binding domain IUA53_02990 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IUA53_03000 PF00141 Peroxidase IUA53_03005 PF00311 Phosphoenolpyruvate carboxylase IUA53_03010 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IUA53_03010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUA53_03015 PF12241 Trans-2-enoyl-CoA reductase catalytic region IUA53_03015 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IUA53_03015 PF07055 Enoyl reductase FAD binding domain IUA53_03020 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) IUA53_03020 PF11973 NQRA C-terminal domain IUA53_03025 PF03116 NQR2, RnfD, RnfE family IUA53_03030 PF04205 FMN-binding domain IUA53_03035 PF02508 Rnf-Nqr subunit, membrane protein IUA53_03040 PF02508 Rnf-Nqr subunit, membrane protein IUA53_03045 PF00970 Oxidoreductase FAD-binding domain IUA53_03045 PF00111 2Fe-2S iron-sulfur cluster binding domain IUA53_03045 PF00175 Oxidoreductase NAD-binding domain IUA53_03050 PF02424 ApbE family IUA53_03060 PF11798 IMS family HHH motif IUA53_03060 PF11799 impB/mucB/samB family C-terminal domain IUA53_03060 PF00817 impB/mucB/samB family IUA53_03075 PF00356 Bacterial regulatory proteins, lacI family IUA53_03085 PF02447 GntP family permease IUA53_03090 PF09905 DNA-binding protein VF530 IUA53_03105 PF00005 ABC transporter IUA53_03105 PF02687 FtsX-like permease family IUA53_03105 PF12704 MacB-like periplasmic core domain IUA53_03115 PF01037 Lrp/AsnC ligand binding domain IUA53_03140 PF13230 Glutamine amidotransferases class-II IUA53_03155 PF03466 LysR substrate binding domain IUA53_03155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_03165 PF00753 Metallo-beta-lactamase superfamily IUA53_03170 PF07969 Amidohydrolase family IUA53_03175 PF00291 Pyridoxal-phosphate dependent enzyme IUA53_03180 PF08448 PAS fold IUA53_03180 PF00563 EAL domain IUA53_03180 PF00990 Diguanylate cyclase, GGDEF domain IUA53_03185 PF08000 Bacterial PH domain IUA53_03190 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IUA53_03190 PF00326 Prolyl oligopeptidase family IUA53_03200 PF05175 Methyltransferase small domain IUA53_03210 PF02472 Biopolymer transport protein ExbD/TolR IUA53_03220 PF00258 Flavodoxin IUA53_03235 PF01625 Peptide methionine sulfoxide reductase IUA53_03250 PF00209 Sodium:neurotransmitter symporter family IUA53_03255 PF01370 NAD dependent epimerase/dehydratase family IUA53_03270 PF00924 Mechanosensitive ion channel IUA53_03275 PF01553 Acyltransferase IUA53_03280 PF01553 Acyltransferase IUA53_03285 PF00756 Putative esterase IUA53_03290 PF03707 Bacterial signalling protein N terminal repeat IUA53_03290 PF00990 Diguanylate cyclase, GGDEF domain IUA53_03290 PF00563 EAL domain IUA53_03295 PF00004 ATPase family associated with various cellular activities (AAA) IUA53_03295 PF05362 Lon protease (S16) C-terminal proteolytic domain IUA53_03295 PF02190 ATP-dependent protease La (LON) substrate-binding domain IUA53_03310 PF13454 FAD-NAD(P)-binding IUA53_03325 PF01207 Dihydrouridine synthase (Dus) IUA53_03335 PF04012 PspA/IM30 family IUA53_03360 PF00258 Flavodoxin IUA53_03360 PF00667 FAD binding domain IUA53_03360 PF00175 Oxidoreductase NAD-binding domain IUA53_03365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IUA53_03365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IUA53_03370 PF01507 Phosphoadenosine phosphosulfate reductase family IUA53_03380 PF03707 Bacterial signalling protein N terminal repeat IUA53_03380 PF00990 Diguanylate cyclase, GGDEF domain IUA53_03380 PF00563 EAL domain IUA53_03385 PF03167 Uracil DNA glycosylase superfamily IUA53_03395 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_03395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUA53_03405 PF00440 Bacterial regulatory proteins, tetR family IUA53_03410 PF05958 tRNA (Uracil-5-)-methyltransferase IUA53_03460 PF01609 Transposase DDE domain IUA53_03460 PF13006 Insertion element 4 transposase N-terminal IUA53_03470 PF03104 DNA polymerase family B, exonuclease domain IUA53_03470 PF00136 DNA polymerase family B IUA53_03475 PF00512 His Kinase A (phospho-acceptor) domain IUA53_03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_03485 PF00072 Response regulator receiver domain IUA53_03485 PF08769 Sporulation initiation factor Spo0A C terminal IUA53_03490 PF00155 Aminotransferase class I and II IUA53_03495 PF01925 Sulfite exporter TauE/SafE IUA53_03505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_03505 PF03466 LysR substrate binding domain IUA53_03510 PF03372 Endonuclease/Exonuclease/phosphatase family IUA53_03525 PF02254 TrkA-N domain IUA53_03525 PF00999 Sodium/hydrogen exchanger family IUA53_03535 PF00141 Peroxidase IUA53_03545 PF06719 AraC-type transcriptional regulator N-terminus IUA53_03545 PF12833 Helix-turn-helix domain IUA53_03550 PF12794 Mechanosensitive ion channel inner membrane domain 1 IUA53_03550 PF12795 Mechanosensitive ion channel porin domain IUA53_03550 PF00924 Mechanosensitive ion channel IUA53_03555 PF07729 FCD domain IUA53_03555 PF00392 Bacterial regulatory proteins, gntR family IUA53_03560 PF14592 Chondroitinase B IUA53_03565 PF00294 pfkB family carbohydrate kinase IUA53_03570 PF01081 KDPG and KHG aldolase IUA53_03580 PF00271 Helicase conserved C-terminal domain IUA53_03580 PF00270 DEAD/DEAH box helicase IUA53_03600 PF00005 ABC transporter IUA53_03605 PF01433 Peptidase family M1 domain IUA53_03605 PF11838 ERAP1-like C-terminal domain IUA53_03615 PF12697 Alpha/beta hydrolase family IUA53_03635 PF13419 Haloacid dehalogenase-like hydrolase IUA53_03645 PF05426 Alginate lyase IUA53_03645 PF07940 Heparinase II/III-like protein IUA53_03655 PF00356 Bacterial regulatory proteins, lacI family IUA53_03660 PF08787 Alginate lyase IUA53_03680 PF01202 Shikimate kinase IUA53_03685 PF14592 Chondroitinase B IUA53_03690 PF05221 S-adenosyl-L-homocysteine hydrolase IUA53_03690 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IUA53_03695 PF00005 ABC transporter IUA53_03700 PF01032 FecCD transport family IUA53_03705 PF01497 Periplasmic binding protein IUA53_03710 PF07715 TonB-dependent Receptor Plug Domain IUA53_03710 PF00593 TonB dependent receptor IUA53_03720 PF00375 Sodium:dicarboxylate symporter family IUA53_03725 PF08447 PAS fold IUA53_03725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_03725 PF13426 PAS domain IUA53_03760 PF00593 TonB dependent receptor IUA53_03765 PF07676 WD40-like Beta Propeller Repeat IUA53_03765 PF14684 Tricorn protease C1 domain IUA53_03765 PF03572 Peptidase family S41 IUA53_03765 PF14685 Tricorn protease PDZ domain IUA53_03775 PF04616 Glycosyl hydrolases family 43 IUA53_03775 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain IUA53_03780 PF03648 Glycosyl hydrolase family 67 N-terminus IUA53_03780 PF07488 Glycosyl hydrolase family 67 middle domain IUA53_03780 PF07477 Glycosyl hydrolase family 67 C-terminus IUA53_03785 PF13378 Enolase C-terminal domain-like IUA53_03785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IUA53_03790 PF04820 Tryptophan halogenase IUA53_03805 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IUA53_03805 PF02837 Glycosyl hydrolases family 2, sugar binding domain IUA53_03805 PF16355 Domain of unknown function (DUF4982) IUA53_03805 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 IUA53_03805 PF00703 Glycosyl hydrolases family 2 IUA53_03815 PF07729 FCD domain IUA53_03815 PF00392 Bacterial regulatory proteins, gntR family IUA53_03825 PF04820 Tryptophan halogenase IUA53_03830 PF04820 Tryptophan halogenase IUA53_03845 PF01695 IstB-like ATP binding protein IUA53_03850 PF00665 Integrase core domain IUA53_03855 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IUA53_03890 PF00700 Bacterial flagellin C-terminal helical region IUA53_03890 PF00669 Bacterial flagellin N-terminal helical region IUA53_03925 PF00589 Phage integrase family IUA53_03925 PF02899 Phage integrase, N-terminal SAM-like domain IUA53_03930 PF00004 ATPase family associated with various cellular activities (AAA) IUA53_03930 PF01434 Peptidase family M41 IUA53_03930 PF17862 AAA+ lid domain IUA53_03955 PF01751 Toprim domain IUA53_03955 PF01131 DNA topoisomerase IUA53_03955 PF01396 Topoisomerase DNA binding C4 zinc finger IUA53_03975 PF12161 HsdM N-terminal domain IUA53_03975 PF02384 N-6 DNA Methylase IUA53_03985 PF18766 SWI2/SNF2 ATPase IUA53_03985 PF12008 Type I restriction and modification enzyme - subunit R C terminal IUA53_03985 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IUA53_04065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IUA53_04065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IUA53_04070 PF05853 beta-keto acid cleavage enzyme IUA53_04085 PF00474 Sodium:solute symporter family IUA53_04090 PF01614 Bacterial transcriptional regulator IUA53_04090 PF09339 IclR helix-turn-helix domain IUA53_04100 PF03739 Lipopolysaccharide export system permease LptF/LptG IUA53_04105 PF03739 Lipopolysaccharide export system permease LptF/LptG IUA53_04110 PF02789 Cytosol aminopeptidase family, N-terminal domain IUA53_04110 PF00883 Cytosol aminopeptidase family, catalytic domain IUA53_04115 PF04364 DNA polymerase III chi subunit, HolC IUA53_04120 PF08264 Anticodon-binding domain of tRNA IUA53_04120 PF00133 tRNA synthetases class I (I, L, M and V) IUA53_04120 PF10458 Valyl tRNA synthetase tRNA binding arm IUA53_04125 PF01627 Hpt domain IUA53_04125 PF00512 His Kinase A (phospho-acceptor) domain IUA53_04125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IUA53_04125 PF00072 Response regulator receiver domain IUA53_04125 PF00672 HAMP domain IUA53_04125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_04145 PF06877 Regulator of ribonuclease activity B IUA53_04150 PF01553 Acyltransferase IUA53_04155 PF00072 Response regulator receiver domain IUA53_04160 PF00158 Sigma-54 interaction domain IUA53_04160 PF00072 Response regulator receiver domain IUA53_04160 PF02954 Bacterial regulatory protein, Fis family IUA53_04165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_04165 PF00512 His Kinase A (phospho-acceptor) domain IUA53_04165 PF00989 PAS fold IUA53_04175 PF03951 Glutamine synthetase, beta-Grasp domain IUA53_04175 PF00120 Glutamine synthetase, catalytic domain IUA53_04180 PF00679 Elongation factor G C-terminus IUA53_04180 PF03144 Elongation factor Tu domain 2 IUA53_04180 PF00009 Elongation factor Tu GTP binding domain IUA53_04185 PF00072 Response regulator receiver domain IUA53_04185 PF00196 Bacterial regulatory proteins, luxR family IUA53_04190 PF00155 Aminotransferase class I and II IUA53_04195 PF01566 Natural resistance-associated macrophage protein IUA53_04210 PF03653 Uncharacterised protein family (UPF0093) IUA53_04230 PF00127 Copper binding proteins, plastocyanin/azurin family IUA53_04235 PF00206 Lyase IUA53_04235 PF10415 Fumarase C C-terminus IUA53_04240 PF05209 Septum formation inhibitor MinC, N-terminal domain IUA53_04240 PF03775 Septum formation inhibitor MinC, C-terminal domain IUA53_04245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IUA53_04250 PF03776 Septum formation topological specificity factor MinE IUA53_04255 PF03976 Polyphosphate kinase 2 (PPK2) IUA53_04270 PF01521 Iron-sulphur cluster biosynthesis IUA53_04275 PF00043 Glutathione S-transferase, C-terminal domain IUA53_04275 PF13417 Glutathione S-transferase, N-terminal domain IUA53_04280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IUA53_04290 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IUA53_04295 PF00072 Response regulator receiver domain IUA53_04295 PF01627 Hpt domain IUA53_04295 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IUA53_04295 PF00512 His Kinase A (phospho-acceptor) domain IUA53_04295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_04295 PF00672 HAMP domain IUA53_04300 PF00072 Response regulator receiver domain IUA53_04305 PF03702 Anhydro-N-acetylmuramic acid kinase IUA53_04310 PF01551 Peptidase family M23 IUA53_04310 PF01464 Transglycosylase SLT domain IUA53_04310 PF10145 Phage-related minor tail protein IUA53_04315 PF00579 tRNA synthetases class I (W and Y) IUA53_04320 PF07237 Protein of unknown function (DUF1428) IUA53_04330 PF00581 Rhodanese-like domain IUA53_04340 PF01048 Phosphorylase superfamily IUA53_04355 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IUA53_04355 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_04360 PF04898 Glutamate synthase central domain IUA53_04360 PF00310 Glutamine amidotransferases class-II IUA53_04360 PF01493 GXGXG motif IUA53_04360 PF01645 Conserved region in glutamate synthase IUA53_04365 PF01510 N-acetylmuramoyl-L-alanine amidase IUA53_04370 PF18415 Histidine kinase receptor ArcB trans-membrane domain IUA53_04370 PF00512 His Kinase A (phospho-acceptor) domain IUA53_04370 PF01627 Hpt domain IUA53_04370 PF00989 PAS fold IUA53_04370 PF00072 Response regulator receiver domain IUA53_04370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_04385 PF00474 Sodium:solute symporter family IUA53_04390 PF00990 Diguanylate cyclase, GGDEF domain IUA53_04395 PF04303 PrpF protein IUA53_04400 PF00330 Aconitase family (aconitate hydratase) IUA53_04400 PF00694 Aconitase C-terminal domain IUA53_04405 PF00285 Citrate synthase, C-terminal domain IUA53_04420 PF07715 TonB-dependent Receptor Plug Domain IUA53_04420 PF00593 TonB dependent receptor IUA53_04425 PF07690 Major Facilitator Superfamily IUA53_04430 PF04972 BON domain IUA53_04435 PF13580 SIS domain IUA53_04440 PF02021 Uncharacterised protein family UPF0102 IUA53_04450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IUA53_04455 PF00990 Diguanylate cyclase, GGDEF domain IUA53_04465 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IUA53_04470 PF03435 Saccharopine dehydrogenase NADP binding domain IUA53_04470 PF16653 Saccharopine dehydrogenase C-terminal domain IUA53_04480 PF00291 Pyridoxal-phosphate dependent enzyme IUA53_04495 PF00512 His Kinase A (phospho-acceptor) domain IUA53_04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_04495 PF07689 KaiB domain IUA53_04500 PF00486 Transcriptional regulatory protein, C terminal IUA53_04500 PF00072 Response regulator receiver domain IUA53_04505 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) IUA53_04510 PF00072 Response regulator receiver domain IUA53_04515 PF01758 Sodium Bile acid symporter family IUA53_04520 PF03358 NADPH-dependent FMN reductase IUA53_04530 PF01022 Bacterial regulatory protein, arsR family IUA53_04540 PF08240 Alcohol dehydrogenase GroES-like domain IUA53_04540 PF00107 Zinc-binding dehydrogenase IUA53_04545 PF03466 LysR substrate binding domain IUA53_04545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_04550 PF00742 Homoserine dehydrogenase IUA53_04550 PF13840 ACT domain IUA53_04550 PF01842 ACT domain IUA53_04550 PF00696 Amino acid kinase family IUA53_04550 PF03447 Homoserine dehydrogenase, NAD binding domain IUA53_04555 PF00288 GHMP kinases N terminal domain IUA53_04555 PF08544 GHMP kinases C terminal IUA53_04560 PF14821 Threonine synthase N terminus IUA53_04560 PF00291 Pyridoxal-phosphate dependent enzyme IUA53_04565 PF03167 Uracil DNA glycosylase superfamily IUA53_04575 PF00342 Phosphoglucose isomerase IUA53_04580 PF00923 Transaldolase/Fructose-6-phosphate aldolase IUA53_04585 PF03883 Peroxide stress protein YaaA IUA53_04595 PF03591 AzlC protein IUA53_04610 PF08787 Alginate lyase IUA53_04625 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_04625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IUA53_04635 PF02325 YGGT family IUA53_04640 PF14748 Pyrroline-5-carboxylate reductase dimerisation IUA53_04640 PF03807 NADP oxidoreductase coenzyme F420-dependent IUA53_04645 PF01168 Alanine racemase, N-terminal domain IUA53_04650 PF00437 Type II/IV secretion system protein IUA53_04655 PF00437 Type II/IV secretion system protein IUA53_04665 PF03652 Holliday junction resolvase IUA53_04670 PF02622 Uncharacterized ACR, COG1678 IUA53_04675 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IUA53_04675 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IUA53_04680 PF04452 RNA methyltransferase IUA53_04685 PF05552 Conserved TM helix IUA53_04685 PF00924 Mechanosensitive ion channel IUA53_04690 PF00929 Exonuclease IUA53_04730 PF07690 Major Facilitator Superfamily IUA53_04735 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IUA53_04735 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IUA53_04740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IUA53_04740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IUA53_04750 PF00158 Sigma-54 interaction domain IUA53_04750 PF02954 Bacterial regulatory protein, Fis family IUA53_04750 PF00072 Response regulator receiver domain IUA53_04760 PF00990 Diguanylate cyclase, GGDEF domain IUA53_04765 PF00462 Glutaredoxin IUA53_04765 PF08534 Redoxin IUA53_04790 PF00873 AcrB/AcrD/AcrF family IUA53_04795 PF01244 Membrane dipeptidase (Peptidase family M19) IUA53_04805 PF02381 MraZ protein, putative antitoxin-like IUA53_04810 PF01795 MraW methylase family IUA53_04815 PF04999 Cell division protein FtsL IUA53_04820 PF03717 Penicillin-binding Protein dimerisation domain IUA53_04820 PF00905 Penicillin binding protein transpeptidase domain IUA53_04825 PF02875 Mur ligase family, glutamate ligase domain IUA53_04825 PF01225 Mur ligase family, catalytic domain IUA53_04825 PF08245 Mur ligase middle domain IUA53_04830 PF01225 Mur ligase family, catalytic domain IUA53_04830 PF08245 Mur ligase middle domain IUA53_04830 PF02875 Mur ligase family, glutamate ligase domain IUA53_04835 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IUA53_04835 PF00953 Glycosyl transferase family 4 IUA53_04840 PF02875 Mur ligase family, glutamate ligase domain IUA53_04840 PF08245 Mur ligase middle domain IUA53_04845 PF01098 Cell cycle protein IUA53_04850 PF03033 Glycosyltransferase family 28 N-terminal domain IUA53_04850 PF04101 Glycosyltransferase family 28 C-terminal domain IUA53_04855 PF08245 Mur ligase middle domain IUA53_04855 PF02875 Mur ligase family, glutamate ligase domain IUA53_04855 PF01225 Mur ligase family, catalytic domain IUA53_04860 PF01820 D-ala D-ala ligase N-terminus IUA53_04860 PF07478 D-ala D-ala ligase C-terminus IUA53_04865 PF08478 POTRA domain, FtsQ-type IUA53_04865 PF03799 Cell division protein FtsQ IUA53_04870 PF02491 SHS2 domain inserted in FTSA IUA53_04875 PF00091 Tubulin/FtsZ family, GTPase domain IUA53_04875 PF12327 FtsZ family, C-terminal domain IUA53_04880 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IUA53_04885 PF01476 LysM domain IUA53_04885 PF08525 Opacity-associated protein A N-terminal motif IUA53_04885 PF01551 Peptidase family M23 IUA53_04890 PF02810 SEC-C motif IUA53_04890 PF07517 SecA DEAD-like domain IUA53_04890 PF07516 SecA Wing and Scaffold domain IUA53_04890 PF01043 SecA preprotein cross-linking domain IUA53_04895 PF00293 NUDIX domain IUA53_04900 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IUA53_04905 PF07715 TonB-dependent Receptor Plug Domain IUA53_04905 PF00593 TonB dependent receptor IUA53_04910 PF14322 Starch-binding associating with outer membrane IUA53_04910 PF07980 SusD family IUA53_04915 PF00083 Sugar (and other) transporter IUA53_04920 PF00251 Glycosyl hydrolases family 32 N-terminal domain IUA53_04920 PF08244 Glycosyl hydrolases family 32 C terminal IUA53_04925 PF01306 LacY proton/sugar symporter IUA53_04930 PF00356 Bacterial regulatory proteins, lacI family IUA53_04940 PF03884 DNA gyrase inhibitor YacG IUA53_04945 PF07072 Cell division protein IUA53_04950 PF01121 Dephospho-CoA kinase IUA53_04955 PF01478 Type IV leader peptidase family IUA53_04955 PF06750 Bacterial Peptidase A24 N-terminal domain IUA53_04960 PF00482 Type II secretion system (T2SS), protein F IUA53_04965 PF07963 Prokaryotic N-terminal methylation motif IUA53_04970 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IUA53_04970 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IUA53_04980 PF01510 N-acetylmuramoyl-L-alanine amidase IUA53_04995 PF17831 Pyruvate dehydrogenase E1 component middle domain IUA53_04995 PF00456 Transketolase, thiamine diphosphate binding domain IUA53_05000 PF02817 e3 binding domain IUA53_05000 PF00364 Biotin-requiring enzyme IUA53_05000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IUA53_05005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUA53_05005 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_05010 PF03466 LysR substrate binding domain IUA53_05015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUA53_05020 PF00873 AcrB/AcrD/AcrF family IUA53_05025 PF06945 Protein of unknown function (DUF1289) IUA53_05045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IUA53_05045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IUA53_05045 PF01842 ACT domain IUA53_05050 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IUA53_05055 PF01812 5-formyltetrahydrofolate cyclo-ligase family IUA53_05060 PF01156 Inosine-uridine preferring nucleoside hydrolase IUA53_05065 PF00294 pfkB family carbohydrate kinase IUA53_05075 PF03695 Uncharacterised protein family (UPF0149) IUA53_05080 PF05195 Aminopeptidase P, N-terminal domain IUA53_05080 PF00557 Metallopeptidase family M24 IUA53_05085 PF01494 FAD binding domain IUA53_05090 PF01494 FAD binding domain IUA53_05100 PF01321 Creatinase/Prolidase N-terminal domain IUA53_05100 PF00557 Metallopeptidase family M24 IUA53_05105 PF03466 LysR substrate binding domain IUA53_05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_05110 PF08669 Glycine cleavage T-protein C-terminal barrel domain IUA53_05110 PF01571 Aminomethyltransferase folate-binding domain IUA53_05115 PF01597 Glycine cleavage H-protein IUA53_05120 PF02347 Glycine cleavage system P-protein IUA53_05130 PF00270 DEAD/DEAH box helicase IUA53_05130 PF00271 Helicase conserved C-terminal domain IUA53_05130 PF18019 HD domain IUA53_05150 PF09704 CRISPR-associated protein (Cas_Cas5) IUA53_05165 PF01867 CRISPR associated protein Cas1 IUA53_05170 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) IUA53_05195 PF03786 D-mannonate dehydratase (UxuA) IUA53_05225 PF00596 Class II Aldolase and Adducin N-terminal domain IUA53_05240 PF00270 DEAD/DEAH box helicase IUA53_05240 PF00271 Helicase conserved C-terminal domain IUA53_05255 PF00005 ABC transporter IUA53_05265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IUA53_05265 PF00072 Response regulator receiver domain IUA53_05265 PF01627 Hpt domain IUA53_05265 PF00512 His Kinase A (phospho-acceptor) domain IUA53_05265 PF00672 HAMP domain IUA53_05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_05270 PF01625 Peptide methionine sulfoxide reductase IUA53_05275 PF02566 OsmC-like protein IUA53_05280 PF00561 alpha/beta hydrolase fold IUA53_05290 PF00072 Response regulator receiver domain IUA53_05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_05290 PF01627 Hpt domain IUA53_05290 PF00672 HAMP domain IUA53_05290 PF00512 His Kinase A (phospho-acceptor) domain IUA53_05290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IUA53_05310 PF12697 Alpha/beta hydrolase family IUA53_05315 PF00270 DEAD/DEAH box helicase IUA53_05315 PF00271 Helicase conserved C-terminal domain IUA53_05315 PF00570 HRDC domain IUA53_05315 PF16124 RecQ zinc-binding IUA53_05315 PF09382 RQC domain IUA53_05355 PF00923 Transaldolase/Fructose-6-phosphate aldolase IUA53_05360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IUA53_05365 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain IUA53_05365 PF04616 Glycosyl hydrolases family 43 IUA53_05375 PF00456 Transketolase, thiamine diphosphate binding domain IUA53_05375 PF02779 Transketolase, pyrimidine binding domain IUA53_05375 PF02780 Transketolase, C-terminal domain IUA53_05380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IUA53_05380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IUA53_05385 PF00331 Glycosyl hydrolase family 10 IUA53_05390 PF04616 Glycosyl hydrolases family 43 IUA53_05400 PF00331 Glycosyl hydrolase family 10 IUA53_05410 PF12833 Helix-turn-helix domain IUA53_05420 PF00083 Sugar (and other) transporter IUA53_05430 PF07152 YaeQ protein IUA53_05460 PF03965 Penicillinase repressor IUA53_05480 PF07715 TonB-dependent Receptor Plug Domain IUA53_05480 PF00593 TonB dependent receptor IUA53_05480 PF07660 Secretin and TonB N terminus short domain IUA53_05500 PF00072 Response regulator receiver domain IUA53_05500 PF00196 Bacterial regulatory proteins, luxR family IUA53_05505 PF03631 Virulence factor BrkB IUA53_05520 PF00593 TonB dependent receptor IUA53_05520 PF07715 TonB-dependent Receptor Plug Domain IUA53_05545 PF04542 Sigma-70 region 2 IUA53_05545 PF08281 Sigma-70, region 4 IUA53_05555 PF01979 Amidohydrolase family IUA53_05560 PF00860 Permease family IUA53_05565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_05565 PF03466 LysR substrate binding domain IUA53_05580 PF01965 DJ-1/PfpI family IUA53_05590 PF00128 Alpha amylase, catalytic domain IUA53_05600 PF01738 Dienelactone hydrolase family IUA53_05625 PF00144 Beta-lactamase IUA53_05625 PF11954 Domain of unknown function (DUF3471) IUA53_05630 PF00990 Diguanylate cyclase, GGDEF domain IUA53_05630 PF00072 Response regulator receiver domain IUA53_05635 PF12633 Adenylate cyclase NT domain IUA53_05635 PF01295 Adenylate cyclase, class-I IUA53_05640 PF00881 Nitroreductase family IUA53_05645 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IUA53_05645 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IUA53_05650 PF00941 FAD binding domain in molybdopterin dehydrogenase IUA53_05650 PF03450 CO dehydrogenase flavoprotein C-terminal domain IUA53_05655 PF00111 2Fe-2S iron-sulfur cluster binding domain IUA53_05655 PF01799 [2Fe-2S] binding domain IUA53_05665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IUA53_05680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUA53_05680 PF18158 Adaptive response protein AidB N-terminal domain IUA53_05680 PF02770 Acyl-CoA dehydrogenase, middle domain IUA53_05695 PF01695 IstB-like ATP binding protein IUA53_05700 PF00665 Integrase core domain IUA53_05710 PF05971 RNA methyltransferase IUA53_05725 PF00378 Enoyl-CoA hydratase/isomerase IUA53_05725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IUA53_05725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IUA53_05735 PF00069 Protein kinase domain IUA53_05735 PF03793 PASTA domain IUA53_05750 PF08032 RNA 2'-O ribose methyltransferase substrate binding IUA53_05750 PF00588 SpoU rRNA Methylase family IUA53_05755 PF01926 50S ribosome-binding GTPase IUA53_05795 PF00356 Bacterial regulatory proteins, lacI family IUA53_05800 PF00265 Thymidine kinase IUA53_05805 PF00990 Diguanylate cyclase, GGDEF domain IUA53_05805 PF03707 Bacterial signalling protein N terminal repeat IUA53_05805 PF00563 EAL domain IUA53_05820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUA53_05820 PF02770 Acyl-CoA dehydrogenase, middle domain IUA53_05820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUA53_05820 PF09317 Domain of unknown function (DUF1974) IUA53_05830 PF03279 Bacterial lipid A biosynthesis acyltransferase IUA53_05840 PF08335 GlnD PII-uridylyltransferase IUA53_05840 PF03710 Glutamate-ammonia ligase adenylyltransferase IUA53_05850 PF01541 GIY-YIG catalytic domain IUA53_05855 PF00294 pfkB family carbohydrate kinase IUA53_05855 PF01467 Cytidylyltransferase-like IUA53_05860 PF01471 Putative peptidoglycan binding domain IUA53_05860 PF13401 AAA domain IUA53_05870 PF13614 AAA domain IUA53_05885 PF02397 Bacterial sugar transferase IUA53_05890 PF01522 Polysaccharide deacetylase IUA53_05915 PF14667 Polysaccharide biosynthesis C-terminal domain IUA53_05935 PF01757 Acyltransferase family IUA53_05965 PF13537 Glutamine amidotransferase domain IUA53_05965 PF00733 Asparagine synthase IUA53_06000 PF14602 Hexapeptide repeat of succinyl-transferase IUA53_06000 PF00132 Bacterial transferase hexapeptide (six repeats) IUA53_06000 PF00483 Nucleotidyl transferase IUA53_06020 PF17820 PDZ domain IUA53_06020 PF13180 PDZ domain IUA53_06025 PF02913 FAD linked oxidases, C-terminal domain IUA53_06025 PF01565 FAD binding domain IUA53_06050 PF01274 Malate synthase IUA53_06055 PF03466 LysR substrate binding domain IUA53_06055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_06060 PF00463 Isocitrate lyase family IUA53_06065 PF00072 Response regulator receiver domain IUA53_06070 PF00245 Alkaline phosphatase IUA53_06075 PF04960 Glutaminase IUA53_06090 PF03738 Glutathionylspermidine synthase preATP-grasp IUA53_06115 PF04012 PspA/IM30 family IUA53_06130 PF02547 Queuosine biosynthesis protein IUA53_06135 PF01702 Queuine tRNA-ribosyltransferase IUA53_06140 PF02699 Preprotein translocase subunit IUA53_06145 PF02355 Protein export membrane protein IUA53_06145 PF13721 SecD export protein N-terminal TM region IUA53_06145 PF07549 SecD/SecF GG Motif IUA53_06150 PF02355 Protein export membrane protein IUA53_06150 PF07549 SecD/SecF GG Motif IUA53_06165 PF00459 Inositol monophosphatase family IUA53_06170 PF00588 SpoU rRNA Methylase family IUA53_06175 PF00132 Bacterial transferase hexapeptide (six repeats) IUA53_06175 PF06426 Serine acetyltransferase, N-terminal IUA53_06180 PF02082 Transcriptional regulator IUA53_06185 PF00266 Aminotransferase class-V IUA53_06190 PF01458 Uncharacterized protein family (UPF0051) IUA53_06195 PF00005 ABC transporter IUA53_06200 PF01458 Uncharacterized protein family (UPF0051) IUA53_06205 PF00266 Aminotransferase class-V IUA53_06210 PF01521 Iron-sulphur cluster biosynthesis IUA53_06215 PF01883 Iron-sulfur cluster assembly protein IUA53_06220 PF02657 Fe-S metabolism associated domain IUA53_06225 PF00334 Nucleoside diphosphate kinase IUA53_06230 PF04055 Radical SAM superfamily IUA53_06240 PF13464 Domain of unknown function (DUF4115) IUA53_06245 PF04551 GcpE protein IUA53_06250 PF03129 Anticodon binding domain IUA53_06250 PF13393 Histidyl-tRNA synthetase IUA53_06255 PF09976 Tetratricopeptide repeat-like domain IUA53_06260 PF13360 PQQ-like domain IUA53_06265 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IUA53_06265 PF01926 50S ribosome-binding GTPase IUA53_06275 PF13742 OB-fold nucleic acid binding domain IUA53_06275 PF02601 Exonuclease VII, large subunit IUA53_06280 PF00478 IMP dehydrogenase / GMP reductase domain IUA53_06280 PF00571 CBS domain IUA53_06285 PF00958 GMP synthase C terminal domain IUA53_06285 PF02540 NAD synthase IUA53_06285 PF00117 Glutamine amidotransferase class-I IUA53_06290 PF00672 HAMP domain IUA53_06290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_06295 PF00850 Histone deacetylase domain IUA53_06300 PF02253 Phospholipase A1 IUA53_06310 PF03129 Anticodon binding domain IUA53_06310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IUA53_06315 PF01980 tRNA-methyltransferase O IUA53_06315 PF18389 TrmO C-terminal domain IUA53_06325 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IUA53_06325 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IUA53_06355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUA53_06355 PF05698 Bacterial trigger factor protein (TF) C-terminus IUA53_06355 PF05697 Bacterial trigger factor protein (TF) IUA53_06360 PF00574 Clp protease IUA53_06365 PF07724 AAA domain (Cdc48 subfamily) IUA53_06365 PF10431 C-terminal, D2-small domain, of ClpB protein IUA53_06365 PF06689 ClpX C4-type zinc finger IUA53_06370 PF05362 Lon protease (S16) C-terminal proteolytic domain IUA53_06370 PF00004 ATPase family associated with various cellular activities (AAA) IUA53_06370 PF02190 ATP-dependent protease La (LON) substrate-binding domain IUA53_06375 PF00216 Bacterial DNA-binding protein IUA53_06385 PF01546 Peptidase family M20/M25/M40 IUA53_06385 PF07687 Peptidase dimerisation domain IUA53_06400 PF00106 short chain dehydrogenase IUA53_06405 PF01649 Ribosomal protein S20 IUA53_06410 PF03023 Lipid II flippase MurJ IUA53_06415 PF06574 FAD synthetase IUA53_06415 PF01687 Riboflavin kinase IUA53_06420 PF06827 Zinc finger found in FPG and IleRS IUA53_06420 PF00133 tRNA synthetases class I (I, L, M and V) IUA53_06420 PF08264 Anticodon-binding domain of tRNA IUA53_06425 PF01252 Signal peptidase (SPase) II IUA53_06430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUA53_06435 PF02401 LytB protein IUA53_06460 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor IUA53_06460 PF07963 Prokaryotic N-terminal methylation motif IUA53_06475 PF07963 Prokaryotic N-terminal methylation motif IUA53_06485 PF07963 Prokaryotic N-terminal methylation motif IUA53_06485 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor IUA53_06495 PF02540 NAD synthase IUA53_06500 PF00543 Nitrogen regulatory protein P-II IUA53_06505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUA53_06515 PF03937 Flavinator of succinate dehydrogenase IUA53_06530 PF02910 Fumarate reductase flavoprotein C-term IUA53_06530 PF00890 FAD binding domain IUA53_06535 PF08281 Sigma-70, region 4 IUA53_06535 PF04542 Sigma-70 region 2 IUA53_06545 PF03888 MucB/RseB N-terminal domain IUA53_06545 PF17188 MucB/RseB C-terminal domain IUA53_06555 PF06421 GTP-binding protein LepA C-terminus IUA53_06555 PF03144 Elongation factor Tu domain 2 IUA53_06555 PF00009 Elongation factor Tu GTP binding domain IUA53_06555 PF00679 Elongation factor G C-terminus IUA53_06560 PF10502 Signal peptidase, peptidase S26 IUA53_06565 PF00035 Double-stranded RNA binding motif IUA53_06565 PF14622 Ribonuclease-III-like IUA53_06570 PF01926 50S ribosome-binding GTPase IUA53_06570 PF07650 KH domain IUA53_06575 PF01243 Pyridoxamine 5'-phosphate oxidase IUA53_06575 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IUA53_06580 PF01026 TatD related DNase IUA53_06590 PF18429 Domain of unknown function (DUF5609) IUA53_06600 PF18073 Rubredoxin metal binding domain IUA53_06610 PF00005 ABC transporter IUA53_06610 PF12848 ABC transporter IUA53_06615 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IUA53_06615 PF14602 Hexapeptide repeat of succinyl-transferase IUA53_06615 PF00132 Bacterial transferase hexapeptide (six repeats) IUA53_06620 PF00464 Serine hydroxymethyltransferase IUA53_06625 PF03477 ATP cone domain IUA53_06630 PF01872 RibD C-terminal domain IUA53_06630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IUA53_06635 PF00677 Lumazine binding domain IUA53_06640 PF00925 GTP cyclohydrolase II IUA53_06640 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IUA53_06645 PF00885 6,7-dimethyl-8-ribityllumazine synthase IUA53_06650 PF01029 NusB family IUA53_06655 PF00586 AIR synthase related protein, N-terminal domain IUA53_06655 PF02769 AIR synthase related protein, C-terminal domain IUA53_06660 PF04608 Phosphatidylglycerophosphatase A IUA53_06665 PF02780 Transketolase, C-terminal domain IUA53_06665 PF02779 Transketolase, pyrimidine binding domain IUA53_06665 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IUA53_06670 PF00348 Polyprenyl synthetase IUA53_06675 PF02609 Exonuclease VII small subunit IUA53_06680 PF01618 MotA/TolQ/ExbB proton channel family IUA53_06685 PF00691 OmpA family IUA53_06685 PF13677 Membrane MotB of proton-channel complex MotA/MotB IUA53_06705 PF00106 short chain dehydrogenase IUA53_06720 PF04542 Sigma-70 region 2 IUA53_06720 PF04545 Sigma-70, region 4 IUA53_06730 PF13525 Outer membrane lipoprotein IUA53_06735 PF00849 RNA pseudouridylate synthase IUA53_06735 PF01479 S4 domain IUA53_06740 PF02578 Multi-copper polyphenol oxidoreductase laccase IUA53_06745 PF17871 AAA lid domain IUA53_06745 PF02861 Clp amino terminal domain, pathogenicity island component IUA53_06745 PF10431 C-terminal, D2-small domain, of ClpB protein IUA53_06745 PF00004 ATPase family associated with various cellular activities (AAA) IUA53_06745 PF07724 AAA domain (Cdc48 subfamily) IUA53_06765 PF01066 CDP-alcohol phosphatidyltransferase IUA53_06795 PF00360 Phytochrome region IUA53_06795 PF01590 GAF domain IUA53_06795 PF00990 Diguanylate cyclase, GGDEF domain IUA53_06795 PF00563 EAL domain IUA53_06805 PF12894 Anaphase-promoting complex subunit 4 WD40 domain IUA53_06805 PF00400 WD domain, G-beta repeat IUA53_06815 PF05114 Protein of unknown function (DUF692) IUA53_06825 PF00156 Phosphoribosyl transferase domain IUA53_06830 PF12169 DNA polymerase III subunits gamma and tau domain III IUA53_06830 PF12170 DNA polymerase III tau subunit V interacting with alpha IUA53_06835 PF02575 YbaB/EbfC DNA-binding family IUA53_06850 PF02132 RecR protein IUA53_06850 PF13662 Toprim domain IUA53_06855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_06855 PF00183 Hsp90 protein IUA53_06860 PF05191 Adenylate kinase, active site lid IUA53_06870 PF00593 TonB dependent receptor IUA53_06870 PF07715 TonB-dependent Receptor Plug Domain IUA53_06880 PF01226 Formate/nitrite transporter IUA53_06885 PF03466 LysR substrate binding domain IUA53_06885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_06890 PF01502 Phosphoribosyl-AMP cyclohydrolase IUA53_06890 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IUA53_06895 PF00977 Histidine biosynthesis protein IUA53_06900 PF00977 Histidine biosynthesis protein IUA53_06905 PF00117 Glutamine amidotransferase class-I IUA53_06910 PF00475 Imidazoleglycerol-phosphate dehydratase IUA53_06915 PF00155 Aminotransferase class I and II IUA53_06920 PF00815 Histidinol dehydrogenase IUA53_06935 PF07715 TonB-dependent Receptor Plug Domain IUA53_06935 PF00593 TonB dependent receptor IUA53_06955 PF00128 Alpha amylase, catalytic domain IUA53_06955 PF16657 Maltogenic Amylase, C-terminal domain IUA53_06955 PF02903 Alpha amylase, N-terminal ig-like domain IUA53_06965 PF13307 Helicase C-terminal domain IUA53_06965 PF06733 DEAD_2 IUA53_06970 PF00814 Glycoprotease family IUA53_06985 PF12697 Alpha/beta hydrolase family IUA53_06990 PF00501 AMP-binding enzyme IUA53_06990 PF13193 AMP-binding enzyme C-terminal domain IUA53_06995 PF00570 HRDC domain IUA53_06995 PF01612 3'-5' exonuclease IUA53_07000 PF05166 YcgL domain IUA53_07010 PF01557 Fumarylacetoacetate (FAA) hydrolase family IUA53_07015 PF03692 Putative zinc- or iron-chelating domain IUA53_07020 PF13302 Acetyltransferase (GNAT) domain IUA53_07025 PF02600 Disulfide bond formation protein DsbB IUA53_07035 PF00392 Bacterial regulatory proteins, gntR family IUA53_07035 PF07840 FadR C-terminal domain IUA53_07040 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IUA53_07040 PF00326 Prolyl oligopeptidase family IUA53_07065 PF04286 Protein of unknown function (DUF445) IUA53_07075 PF06974 Protein of unknown function (DUF1298) IUA53_07075 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain IUA53_07085 PF00732 GMC oxidoreductase IUA53_07085 PF05199 GMC oxidoreductase IUA53_07090 PF02909 Tetracyclin repressor-like, C-terminal domain IUA53_07090 PF00440 Bacterial regulatory proteins, tetR family IUA53_07095 PF00378 Enoyl-CoA hydratase/isomerase IUA53_07100 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_07100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IUA53_07120 PF04315 Elongation factor P hydroxylase IUA53_07135 PF00072 Response regulator receiver domain IUA53_07135 PF00512 His Kinase A (phospho-acceptor) domain IUA53_07135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IUA53_07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_07135 PF01627 Hpt domain IUA53_07135 PF00672 HAMP domain IUA53_07140 PF00924 Mechanosensitive ion channel IUA53_07165 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IUA53_07165 PF01266 FAD dependent oxidoreductase IUA53_07170 PF00109 Beta-ketoacyl synthase, N-terminal domain IUA53_07170 PF02801 Beta-ketoacyl synthase, C-terminal domain IUA53_07180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IUA53_07180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IUA53_07180 PF11890 Domain of unknown function (DUF3410) IUA53_07185 PF02774 Semialdehyde dehydrogenase, dimerisation domain IUA53_07185 PF01118 Semialdehyde dehydrogenase, NAD binding domain IUA53_07195 PF01416 tRNA pseudouridine synthase IUA53_07200 PF01039 Carboxyl transferase domain IUA53_07200 PF17848 Acetyl-coA carboxylase zinc finger domain IUA53_07205 PF08245 Mur ligase middle domain IUA53_07205 PF02875 Mur ligase family, glutamate ligase domain IUA53_07210 PF05036 Sporulation related domain IUA53_07215 PF02674 Colicin V production protein IUA53_07220 PF00156 Phosphoribosyl transferase domain IUA53_07230 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IUA53_07235 PF04336 Acyl carrier protein phosphodiesterase IUA53_07240 PF03466 LysR substrate binding domain IUA53_07240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_07245 PF08240 Alcohol dehydrogenase GroES-like domain IUA53_07245 PF00107 Zinc-binding dehydrogenase IUA53_07250 PF15975 Flotillin IUA53_07250 PF01145 SPFH domain / Band 7 family IUA53_07265 PF00245 Alkaline phosphatase IUA53_07270 PF00245 Alkaline phosphatase IUA53_07275 PF00149 Calcineurin-like phosphoesterase IUA53_07280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IUA53_07285 PF09190 DALR domain IUA53_07285 PF01406 tRNA synthetases class I (C) catalytic domain IUA53_07295 PF01476 LysM domain IUA53_07295 PF01464 Transglycosylase SLT domain IUA53_07300 PF16123 Hydroxyacylglutathione hydrolase C-terminus IUA53_07300 PF00753 Metallo-beta-lactamase superfamily IUA53_07305 PF08241 Methyltransferase domain IUA53_07310 PF01588 Putative tRNA binding domain IUA53_07310 PF08264 Anticodon-binding domain of tRNA IUA53_07310 PF09334 tRNA synthetases class I (M) IUA53_07315 PF10609 NUBPL iron-transfer P-loop NTPase IUA53_07320 PF00692 dUTPase IUA53_07325 PF00939 Sodium:sulfate symporter transmembrane region IUA53_07345 PF01145 SPFH domain / Band 7 family IUA53_07385 PF00497 Bacterial extracellular solute-binding proteins, family 3 IUA53_07385 PF00512 His Kinase A (phospho-acceptor) domain IUA53_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_07390 PF11849 Domain of unknown function (DUF3369) IUA53_07395 PF00881 Nitroreductase family IUA53_07400 PF00512 His Kinase A (phospho-acceptor) domain IUA53_07400 PF16527 Two-component sensor protein CpxA, periplasmic domain IUA53_07400 PF00672 HAMP domain IUA53_07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_07405 PF00072 Response regulator receiver domain IUA53_07405 PF00486 Transcriptional regulatory protein, C terminal IUA53_07425 PF00563 EAL domain IUA53_07425 PF03707 Bacterial signalling protein N terminal repeat IUA53_07425 PF00990 Diguanylate cyclase, GGDEF domain IUA53_07440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IUA53_07440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IUA53_07445 PF13378 Enolase C-terminal domain-like IUA53_07445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IUA53_07450 PF00356 Bacterial regulatory proteins, lacI family IUA53_07465 PF00005 ABC transporter IUA53_07475 PF00873 AcrB/AcrD/AcrF family IUA53_07480 PF11838 ERAP1-like C-terminal domain IUA53_07480 PF01433 Peptidase family M1 domain IUA53_07490 PF00072 Response regulator receiver domain IUA53_07490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IUA53_07490 PF01627 Hpt domain IUA53_07490 PF00512 His Kinase A (phospho-acceptor) domain IUA53_07490 PF00672 HAMP domain IUA53_07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_07495 PF01095 Pectinesterase IUA53_07500 PF00295 Glycosyl hydrolases family 28 IUA53_07505 PF07470 Glycosyl Hydrolase Family 88 IUA53_07515 PF13472 GDSL-like Lipase/Acylhydrolase family IUA53_07520 PF00294 pfkB family carbohydrate kinase IUA53_07525 PF01232 Mannitol dehydrogenase Rossmann domain IUA53_07525 PF08125 Mannitol dehydrogenase C-terminal domain IUA53_07530 PF02614 Glucuronate isomerase IUA53_07535 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IUA53_07535 PF08666 SAF domain IUA53_07540 PF00356 Bacterial regulatory proteins, lacI family IUA53_07545 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IUA53_07555 PF03480 Bacterial extracellular solute-binding protein, family 7 IUA53_07560 PF04962 KduI/IolB family IUA53_07600 PF00072 Response regulator receiver domain IUA53_07600 PF00486 Transcriptional regulatory protein, C terminal IUA53_07605 PF00672 HAMP domain IUA53_07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_07605 PF00512 His Kinase A (phospho-acceptor) domain IUA53_07645 PF01048 Phosphorylase superfamily IUA53_07650 PF00224 Pyruvate kinase, barrel domain IUA53_07650 PF02887 Pyruvate kinase, alpha/beta domain IUA53_07655 PF01380 SIS domain IUA53_07655 PF01418 Helix-turn-helix domain, rpiR family IUA53_07660 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IUA53_07660 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IUA53_07665 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IUA53_07670 PF00920 Dehydratase family IUA53_07675 PF02685 Glucokinase IUA53_07680 PF01081 KDPG and KHG aldolase IUA53_07685 PF01263 Aldose 1-epimerase IUA53_07690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IUA53_07690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IUA53_07695 PF02446 4-alpha-glucanotransferase IUA53_07700 PF00128 Alpha amylase, catalytic domain IUA53_07700 PF02806 Alpha amylase, C-terminal all-beta domain IUA53_07700 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IUA53_07705 PF00128 Alpha amylase, catalytic domain IUA53_07705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IUA53_07710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IUA53_07710 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IUA53_07715 PF01641 SelR domain IUA53_07725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IUA53_07725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IUA53_07730 PF00246 Zinc carboxypeptidase IUA53_07730 PF18027 Cytosolic carboxypeptidase N-terminal domain IUA53_07735 PF01235 Sodium:alanine symporter family IUA53_07745 PF07023 Protein of unknown function (DUF1315) IUA53_07765 PF07043 Protein of unknown function (DUF1328) IUA53_07790 PF00072 Response regulator receiver domain IUA53_07790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_07790 PF09308 LuxQ, periplasmic IUA53_07790 PF00512 His Kinase A (phospho-acceptor) domain IUA53_07795 PF00072 Response regulator receiver domain IUA53_07800 PF01590 GAF domain IUA53_07800 PF08446 PAS fold IUA53_07800 PF00512 His Kinase A (phospho-acceptor) domain IUA53_07800 PF00360 Phytochrome region IUA53_07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_07810 PF00072 Response regulator receiver domain IUA53_07810 PF02954 Bacterial regulatory protein, Fis family IUA53_07810 PF00158 Sigma-54 interaction domain IUA53_07830 PF01022 Bacterial regulatory protein, arsR family IUA53_07840 PF04219 Protein of unknown function, DUF IUA53_07850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_07850 PF03466 LysR substrate binding domain IUA53_07865 PF04337 Protein of unknown function, DUF480 IUA53_07870 PF12706 Beta-lactamase superfamily domain IUA53_07870 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IUA53_07870 PF17770 Ribonuclease J C-terminal domain IUA53_07875 PF03707 Bacterial signalling protein N terminal repeat IUA53_07875 PF00563 EAL domain IUA53_07875 PF00990 Diguanylate cyclase, GGDEF domain IUA53_07880 PF00501 AMP-binding enzyme IUA53_07890 PF17946 RecC C-terminal domain IUA53_07895 PF12705 PD-(D/E)XK nuclease superfamily IUA53_07895 PF13361 UvrD-like helicase C-terminal domain IUA53_07895 PF00580 UvrD/REP helicase N-terminal domain IUA53_07900 PF13538 UvrD-like helicase C-terminal domain IUA53_07925 PF00155 Aminotransferase class I and II IUA53_07930 PF03435 Saccharopine dehydrogenase NADP binding domain IUA53_07935 PF00155 Aminotransferase class I and II IUA53_07955 PF00899 ThiF family IUA53_07960 PF00994 Probable molybdopterin binding domain IUA53_07965 PF01967 MoaC family IUA53_07970 PF02597 ThiS family IUA53_07975 PF02391 MoaE protein IUA53_07985 PF00528 Binding-protein-dependent transport system inner membrane component IUA53_07990 PF03459 TOBE domain IUA53_07990 PF10649 Protein of unknown function (DUF2478) IUA53_07990 PF00005 ABC transporter IUA53_07995 PF06969 HemN C-terminal domain IUA53_07995 PF04055 Radical SAM superfamily IUA53_08010 PF00593 TonB dependent receptor IUA53_08010 PF07715 TonB-dependent Receptor Plug Domain IUA53_08020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUA53_08020 PF02770 Acyl-CoA dehydrogenase, middle domain IUA53_08020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUA53_08030 PF08240 Alcohol dehydrogenase GroES-like domain IUA53_08030 PF00107 Zinc-binding dehydrogenase IUA53_08045 PF00561 alpha/beta hydrolase fold IUA53_08050 PF00378 Enoyl-CoA hydratase/isomerase IUA53_08050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IUA53_08050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IUA53_08055 PF00108 Thiolase, N-terminal domain IUA53_08055 PF02803 Thiolase, C-terminal domain IUA53_08060 PF12806 Acetyl-CoA dehydrogenase C-terminal like IUA53_08060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUA53_08060 PF02770 Acyl-CoA dehydrogenase, middle domain IUA53_08060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUA53_08070 PF04198 Putative sugar-binding domain IUA53_08075 PF13419 Haloacid dehalogenase-like hydrolase IUA53_08085 PF01232 Mannitol dehydrogenase Rossmann domain IUA53_08085 PF08125 Mannitol dehydrogenase C-terminal domain IUA53_08095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_08095 PF03466 LysR substrate binding domain IUA53_08100 PF01575 MaoC like domain IUA53_08110 PF00924 Mechanosensitive ion channel IUA53_08115 PF00593 TonB dependent receptor IUA53_08115 PF07715 TonB-dependent Receptor Plug Domain IUA53_08120 PF01329 Pterin 4 alpha carbinolamine dehydratase IUA53_08135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_08135 PF00672 HAMP domain IUA53_08135 PF01627 Hpt domain IUA53_08135 PF00072 Response regulator receiver domain IUA53_08135 PF00512 His Kinase A (phospho-acceptor) domain IUA53_08135 PF17149 Periplasmic sensor domain found in signal transduction proteins IUA53_08140 PF00072 Response regulator receiver domain IUA53_08145 PF02576 RimP N-terminal domain IUA53_08145 PF17384 RimP C-terminal SH3 domain IUA53_08150 PF08529 NusA N-terminal domain IUA53_08150 PF13184 NusA-like KH domain IUA53_08150 PF00575 S1 RNA binding domain IUA53_08155 PF08364 Bacterial translation initiation factor IF-2 associated region IUA53_08155 PF04760 Translation initiation factor IF-2, N-terminal region IUA53_08155 PF00009 Elongation factor Tu GTP binding domain IUA53_08155 PF11987 Translation-initiation factor 2 IUA53_08160 PF02033 Ribosome-binding factor A IUA53_08165 PF01509 TruB family pseudouridylate synthase (N terminal domain) IUA53_08165 PF09157 Pseudouridine synthase II TruB, C-terminal IUA53_08165 PF16198 tRNA pseudouridylate synthase B C-terminal domain IUA53_08170 PF00312 Ribosomal protein S15 IUA53_08175 PF00990 Diguanylate cyclase, GGDEF domain IUA53_08175 PF08448 PAS fold IUA53_08180 PF12697 Alpha/beta hydrolase family IUA53_08190 PF00583 Acetyltransferase (GNAT) family IUA53_08190 PF00795 Carbon-nitrogen hydrolase IUA53_08215 PF00578 AhpC/TSA family IUA53_08215 PF10417 C-terminal domain of 1-Cys peroxiredoxin IUA53_08220 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_08220 PF13192 Thioredoxin domain IUA53_08225 PF00593 TonB dependent receptor IUA53_08225 PF07715 TonB-dependent Receptor Plug Domain IUA53_08240 PF07883 Cupin domain IUA53_08255 PF08497 Radical SAM N-terminal IUA53_08255 PF11842 Domain of unknown function (DUF3362) IUA53_08255 PF04055 Radical SAM superfamily IUA53_08270 PF00593 TonB dependent receptor IUA53_08270 PF07715 TonB-dependent Receptor Plug Domain IUA53_08275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUA53_08275 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_08285 PF13416 Bacterial extracellular solute-binding protein IUA53_08290 PF00528 Binding-protein-dependent transport system inner membrane component IUA53_08295 PF00005 ABC transporter IUA53_08300 PF01066 CDP-alcohol phosphatidyltransferase IUA53_08310 PF06055 Exopolysaccharide synthesis, ExoD IUA53_08315 PF00107 Zinc-binding dehydrogenase IUA53_08315 PF08240 Alcohol dehydrogenase GroES-like domain IUA53_08325 PF00593 TonB dependent receptor IUA53_08325 PF07715 TonB-dependent Receptor Plug Domain IUA53_08350 PF12729 Four helix bundle sensory module for signal transduction IUA53_08350 PF00672 HAMP domain IUA53_08350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_08370 PF00005 ABC transporter IUA53_08385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IUA53_08390 PF01668 SmpB protein IUA53_08395 PF03364 Polyketide cyclase / dehydrase and lipid transport IUA53_08400 PF03658 RnfH family Ubiquitin IUA53_08410 PF02028 BCCT, betaine/carnitine/choline family transporter IUA53_08415 PF07715 TonB-dependent Receptor Plug Domain IUA53_08415 PF00593 TonB dependent receptor IUA53_08420 PF13181 Tetratricopeptide repeat IUA53_08425 PF03618 Kinase/pyrophosphorylase IUA53_08430 PF00391 PEP-utilising enzyme, mobile domain IUA53_08430 PF02896 PEP-utilising enzyme, TIM barrel domain IUA53_08430 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IUA53_08435 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IUA53_08440 PF01799 [2Fe-2S] binding domain IUA53_08440 PF00111 2Fe-2S iron-sulfur cluster binding domain IUA53_08450 PF02913 FAD linked oxidases, C-terminal domain IUA53_08450 PF01565 FAD binding domain IUA53_08450 PF13183 4Fe-4S dicluster domain IUA53_08460 PF08007 Cupin superfamily protein IUA53_08470 PF00206 Lyase IUA53_08470 PF08328 Adenylosuccinate lyase C-terminal IUA53_08475 PF04356 Protein of unknown function (DUF489) IUA53_08485 PF00849 RNA pseudouridylate synthase IUA53_08490 PF03971 Monomeric isocitrate dehydrogenase IUA53_08495 PF00313 'Cold-shock' DNA-binding domain IUA53_08500 PF02617 ATP-dependent Clp protease adaptor protein ClpS IUA53_08505 PF02861 Clp amino terminal domain, pathogenicity island component IUA53_08505 PF17871 AAA lid domain IUA53_08505 PF07724 AAA domain (Cdc48 subfamily) IUA53_08505 PF00004 ATPase family associated with various cellular activities (AAA) IUA53_08505 PF10431 C-terminal, D2-small domain, of ClpB protein IUA53_08510 PF01176 Translation initiation factor 1A / IF-1 IUA53_08515 PF04377 Arginine-tRNA-protein transferase, C terminus IUA53_08515 PF04376 Arginine-tRNA-protein transferase, N terminus IUA53_08520 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IUA53_08525 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_08530 PF04217 Protein of unknown function, DUF412 IUA53_08535 PF10263 SprT-like family IUA53_08540 PF01343 Peptidase family S49 IUA53_08545 PF00881 Nitroreductase family IUA53_08555 PF17763 Glutaminase/Asparaginase C-terminal domain IUA53_08555 PF00710 Asparaginase, N-terminal IUA53_08560 PF00990 Diguanylate cyclase, GGDEF domain IUA53_08560 PF17158 Membrane-associated sensor, integral membrane domain IUA53_08565 PF04055 Radical SAM superfamily IUA53_08565 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IUA53_08570 PF03099 Biotin/lipoate A/B protein ligase family IUA53_08575 PF04359 Protein of unknown function (DUF493) IUA53_08580 PF07943 Penicillin-binding protein 5, C-terminal domain IUA53_08580 PF00768 D-alanyl-D-alanine carboxypeptidase IUA53_08585 PF03330 Lytic transglycolase IUA53_08585 PF05036 Sporulation related domain IUA53_08590 PF01098 Cell cycle protein IUA53_08595 PF03717 Penicillin-binding Protein dimerisation domain IUA53_08595 PF00905 Penicillin binding protein transpeptidase domain IUA53_08600 PF02590 Predicted SPOUT methyltransferase IUA53_08610 PF01467 Cytidylyltransferase-like IUA53_08615 PF06144 DNA polymerase III, delta subunit IUA53_08615 PF14840 Processivity clamp loader gamma complex DNA pol III C-term IUA53_08620 PF04390 Lipopolysaccharide-assembly IUA53_08625 PF08264 Anticodon-binding domain of tRNA IUA53_08625 PF13603 Leucyl-tRNA synthetase, Domain 2 IUA53_08625 PF00133 tRNA synthetases class I (I, L, M and V) IUA53_08630 PF13654 AAA domain IUA53_08630 PF05362 Lon protease (S16) C-terminal proteolytic domain IUA53_08635 PF00106 short chain dehydrogenase IUA53_08640 PF01985 CRS1 / YhbY (CRM) domain IUA53_08645 PF01728 FtsJ-like methyltransferase IUA53_08655 PF00809 Pterin binding enzyme IUA53_08660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IUA53_08660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IUA53_08660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IUA53_08660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IUA53_08665 PF00121 Triosephosphate isomerase IUA53_08670 PF03840 Preprotein translocase SecG subunit IUA53_08680 PF00498 FHA domain IUA53_08680 PF00990 Diguanylate cyclase, GGDEF domain IUA53_08680 PF00563 EAL domain IUA53_08685 PF01679 Proteolipid membrane potential modulator IUA53_08695 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IUA53_08695 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IUA53_08700 PF00781 Diacylglycerol kinase catalytic domain IUA53_08710 PF00106 short chain dehydrogenase IUA53_08725 PF00474 Sodium:solute symporter family IUA53_08730 PF00696 Amino acid kinase family IUA53_08735 PF00171 Aldehyde dehydrogenase family IUA53_08750 PF00013 KH domain IUA53_08750 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IUA53_08750 PF01138 3' exoribonuclease family, domain 1 IUA53_08750 PF00575 S1 RNA binding domain IUA53_08750 PF03725 3' exoribonuclease family, domain 2 IUA53_08770 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IUA53_08770 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region IUA53_08775 PF13181 Tetratricopeptide repeat IUA53_08775 PF07719 Tetratricopeptide repeat IUA53_08790 PF06470 SMC proteins Flexible Hinge Domain IUA53_08790 PF02463 RecF/RecN/SMC N terminal domain IUA53_08795 PF04354 ZipA, C-terminal FtsZ-binding domain IUA53_08800 PF12826 Helix-hairpin-helix motif IUA53_08800 PF01653 NAD-dependent DNA ligase adenylation domain IUA53_08800 PF03120 NAD-dependent DNA ligase OB-fold domain IUA53_08800 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IUA53_08800 PF00533 BRCA1 C Terminus (BRCT) domain IUA53_08810 PF03772 Competence protein IUA53_08810 PF00753 Metallo-beta-lactamase superfamily IUA53_08815 PF00005 ABC transporter IUA53_08815 PF00664 ABC transporter transmembrane region IUA53_08820 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IUA53_08825 PF03966 Trm112p-like protein IUA53_08830 PF02348 Cytidylyltransferase IUA53_08835 PF00106 short chain dehydrogenase IUA53_08840 PF00919 Uncharacterized protein family UPF0004 IUA53_08840 PF18693 TRAM domain IUA53_08840 PF04055 Radical SAM superfamily IUA53_08890 PF04299 Putative FMN-binding domain IUA53_08985 PF00899 ThiF family IUA53_08990 PF13409 Glutathione S-transferase, N-terminal domain IUA53_08995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IUA53_08995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IUA53_08995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IUA53_08995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IUA53_09005 PF00285 Citrate synthase, C-terminal domain IUA53_09010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IUA53_09015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IUA53_09020 PF02910 Fumarate reductase flavoprotein C-term IUA53_09020 PF00890 FAD binding domain IUA53_09025 PF13085 2Fe-2S iron-sulfur cluster binding domain IUA53_09030 PF16078 2-oxoglutarate dehydrogenase N-terminus IUA53_09030 PF02779 Transketolase, pyrimidine binding domain IUA53_09030 PF16870 2-oxoglutarate dehydrogenase C-terminal IUA53_09030 PF00676 Dehydrogenase E1 component IUA53_09035 PF00364 Biotin-requiring enzyme IUA53_09035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IUA53_09035 PF02817 e3 binding domain IUA53_09040 PF08442 ATP-grasp domain IUA53_09040 PF00549 CoA-ligase IUA53_09045 PF02629 CoA binding domain IUA53_09045 PF00549 CoA-ligase IUA53_09055 PF04820 Tryptophan halogenase IUA53_09065 PF17967 Pullulanase N2 domain IUA53_09065 PF03714 Bacterial pullanase-associated domain IUA53_09065 PF11852 Domain of unknown function (DUF3372) IUA53_09065 PF18494 Pullulanase Ins domain IUA53_09065 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IUA53_09070 PF01734 Patatin-like phospholipase IUA53_09080 PF02903 Alpha amylase, N-terminal ig-like domain IUA53_09080 PF16657 Maltogenic Amylase, C-terminal domain IUA53_09080 PF00128 Alpha amylase, catalytic domain IUA53_09085 PF10438 Cyclo-malto-dextrinase C-terminal domain IUA53_09085 PF00128 Alpha amylase, catalytic domain IUA53_09085 PF09087 Cyclomaltodextrinase, N-terminal IUA53_09095 PF00128 Alpha amylase, catalytic domain IUA53_09095 PF00686 Starch binding domain IUA53_09100 PF00356 Bacterial regulatory proteins, lacI family IUA53_09105 PF00749 tRNA synthetases class I (E and Q), catalytic domain IUA53_09105 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IUA53_09110 PF00106 short chain dehydrogenase IUA53_09115 PF12262 Bacterial virulence factor lipase N-terminal IUA53_09120 PF01804 Penicillin amidase IUA53_09125 PF08496 Peptidase family S49 N-terminal IUA53_09125 PF01343 Peptidase family S49 IUA53_09135 PF01784 NIF3 (NGG1p interacting factor 3) IUA53_09140 PF13847 Methyltransferase domain IUA53_09145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IUA53_09145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IUA53_09150 PF00255 Glutathione peroxidase IUA53_09155 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IUA53_09155 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IUA53_09165 PF00171 Aldehyde dehydrogenase family IUA53_09170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUA53_09170 PF02770 Acyl-CoA dehydrogenase, middle domain IUA53_09170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUA53_09175 PF00378 Enoyl-CoA hydratase/isomerase IUA53_09180 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IUA53_09180 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IUA53_09185 PF13847 Methyltransferase domain IUA53_09195 PF00884 Sulfatase IUA53_09195 PF11893 Domain of unknown function (DUF3413) IUA53_09200 PF07208 Protein of unknown function (DUF1414) IUA53_09205 PF04245 37-kD nucleoid-associated bacterial protein IUA53_09235 PF07694 5TMR of 5TMR-LYT IUA53_09235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_09235 PF06580 Histidine kinase IUA53_09240 PF00072 Response regulator receiver domain IUA53_09240 PF04397 LytTr DNA-binding domain IUA53_09245 PF00365 Phosphofructokinase IUA53_09270 PF00497 Bacterial extracellular solute-binding proteins, family 3 IUA53_09270 PF00072 Response regulator receiver domain IUA53_09270 PF00989 PAS fold IUA53_09270 PF01627 Hpt domain IUA53_09270 PF00512 His Kinase A (phospho-acceptor) domain IUA53_09270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_09280 PF17773 UPF0176 acylphosphatase like domain IUA53_09280 PF00581 Rhodanese-like domain IUA53_09290 PF00849 RNA pseudouridylate synthase IUA53_09290 PF01479 S4 domain IUA53_09295 PF00990 Diguanylate cyclase, GGDEF domain IUA53_09295 PF00563 EAL domain IUA53_09295 PF03707 Bacterial signalling protein N terminal repeat IUA53_09300 PF00270 DEAD/DEAH box helicase IUA53_09300 PF00271 Helicase conserved C-terminal domain IUA53_09305 PF01144 Coenzyme A transferase IUA53_09310 PF01144 Coenzyme A transferase IUA53_09315 PF03466 LysR substrate binding domain IUA53_09315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_09340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_09340 PF03466 LysR substrate binding domain IUA53_09345 PF03313 Serine dehydratase alpha chain IUA53_09345 PF03315 Serine dehydratase beta chain IUA53_09350 PF00293 NUDIX domain IUA53_09355 PF04715 Anthranilate synthase component I, N terminal region IUA53_09355 PF00425 chorismate binding enzyme IUA53_09365 PF02646 RmuC family IUA53_09370 PF08448 PAS fold IUA53_09370 PF00990 Diguanylate cyclase, GGDEF domain IUA53_09380 PF05922 Peptidase inhibitor I9 IUA53_09380 PF00082 Subtilase family IUA53_09380 PF13860 FlgD Ig-like domain IUA53_09380 PF02225 PA domain IUA53_09385 PF00676 Dehydrogenase E1 component IUA53_09390 PF02780 Transketolase, C-terminal domain IUA53_09390 PF02779 Transketolase, pyrimidine binding domain IUA53_09395 PF00364 Biotin-requiring enzyme IUA53_09395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IUA53_09395 PF02817 e3 binding domain IUA53_09400 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IUA53_09405 PF00069 Protein kinase domain IUA53_09415 PF00132 Bacterial transferase hexapeptide (six repeats) IUA53_09420 PF00266 Aminotransferase class-V IUA53_09430 PF13185 GAF domain IUA53_09440 PF17516 ProQ C-terminal domain IUA53_09440 PF04352 ProQ/FINO family IUA53_09445 PF17804 Tail specific protease N-terminal domain IUA53_09445 PF03572 Peptidase family S41 IUA53_09445 PF00595 PDZ domain IUA53_09445 PF11818 C-terminal domain of tail specific protease (DUF3340) IUA53_09450 PF00209 Sodium:neurotransmitter symporter family IUA53_09455 PF03553 Na+/H+ antiporter family IUA53_09460 PF11940 Domain of unknown function (DUF3458) Ig-like fold IUA53_09460 PF01433 Peptidase family M1 domain IUA53_09460 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IUA53_09475 PF07044 Protein of unknown function (DUF1329) IUA53_09490 PF05088 Bacterial NAD-glutamate dehydrogenase IUA53_09495 PF01180 Dihydroorotate dehydrogenase IUA53_09500 PF01170 Putative RNA methylase family UPF0020 IUA53_09500 PF02926 THUMP domain IUA53_09500 PF10672 S-adenosylmethionine-dependent methyltransferase IUA53_09510 PF00005 ABC transporter IUA53_09510 PF12848 ABC transporter IUA53_09510 PF16326 ABC transporter C-terminal domain IUA53_09520 PF04957 Ribosome modulation factor IUA53_09525 PF01609 Transposase DDE domain IUA53_09525 PF13006 Insertion element 4 transposase N-terminal IUA53_09530 PF07977 FabA-like domain IUA53_09540 PF03441 FAD binding domain of DNA photolyase IUA53_09540 PF00875 DNA photolyase IUA53_09545 PF03441 FAD binding domain of DNA photolyase IUA53_09545 PF00875 DNA photolyase IUA53_09550 PF03441 FAD binding domain of DNA photolyase IUA53_09550 PF00875 DNA photolyase IUA53_09555 PF04244 Deoxyribodipyrimidine photo-lyase-related protein IUA53_09570 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IUA53_09570 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_09570 PF00403 Heavy-metal-associated domain IUA53_09575 PF00403 Heavy-metal-associated domain IUA53_09580 PF02411 MerT mercuric transport protein IUA53_09585 PF13411 MerR HTH family regulatory protein IUA53_09615 PF00144 Beta-lactamase IUA53_09625 PF07715 TonB-dependent Receptor Plug Domain IUA53_09625 PF07660 Secretin and TonB N terminus short domain IUA53_09625 PF00593 TonB dependent receptor IUA53_09630 PF00873 AcrB/AcrD/AcrF family IUA53_09650 PF16916 Dimerisation domain of Zinc Transporter IUA53_09650 PF01545 Cation efflux family IUA53_09655 PF00873 AcrB/AcrD/AcrF family IUA53_09660 PF00529 HlyD membrane-fusion protein of T1SS IUA53_09660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUA53_09680 PF13411 MerR HTH family regulatory protein IUA53_09685 PF02311 AraC-like ligand binding domain IUA53_09685 PF12833 Helix-turn-helix domain IUA53_09710 PF07732 Multicopper oxidase IUA53_09710 PF07731 Multicopper oxidase IUA53_09710 PF00394 Multicopper oxidase IUA53_09715 PF05275 Copper resistance protein B precursor (CopB) IUA53_09730 PF00462 Glutaredoxin IUA53_09770 PF00403 Heavy-metal-associated domain IUA53_09775 PF00376 MerR family regulatory protein IUA53_09775 PF09278 MerR, DNA binding IUA53_09795 PF00042 Globin IUA53_09795 PF00970 Oxidoreductase FAD-binding domain IUA53_09795 PF00175 Oxidoreductase NAD-binding domain IUA53_09815 PF00106 short chain dehydrogenase IUA53_09850 PF00970 Oxidoreductase FAD-binding domain IUA53_09850 PF00111 2Fe-2S iron-sulfur cluster binding domain IUA53_09850 PF00175 Oxidoreductase NAD-binding domain IUA53_09860 PF00873 AcrB/AcrD/AcrF family IUA53_09865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUA53_09890 PF00072 Response regulator receiver domain IUA53_09890 PF00486 Transcriptional regulatory protein, C terminal IUA53_09895 PF00672 HAMP domain IUA53_09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_09895 PF00512 His Kinase A (phospho-acceptor) domain IUA53_09915 PF01381 Helix-turn-helix IUA53_09935 PF13700 Domain of unknown function (DUF4158) IUA53_09935 PF01526 Tn3 transposase DDE domain IUA53_09955 PF01219 Prokaryotic diacylglycerol kinase IUA53_09960 PF00582 Universal stress protein family IUA53_09970 PF01645 Conserved region in glutamate synthase IUA53_09975 PF00999 Sodium/hydrogen exchanger family IUA53_09980 PF00210 Ferritin-like domain IUA53_09985 PF00210 Ferritin-like domain IUA53_09995 PF00115 Cytochrome C and Quinol oxidase polypeptide I IUA53_10010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IUA53_10010 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IUA53_10020 PF00403 Heavy-metal-associated domain IUA53_10035 PF13545 Crp-like helix-turn-helix domain IUA53_10035 PF00027 Cyclic nucleotide-binding domain IUA53_10040 PF00582 Universal stress protein family IUA53_10045 PF01171 PP-loop family IUA53_10050 PF01734 Patatin-like phospholipase IUA53_10070 PF01810 LysE type translocator IUA53_10075 PF02146 Sir2 family IUA53_10080 PF00581 Rhodanese-like domain IUA53_10085 PF08534 Redoxin IUA53_10090 PF03942 DTW domain IUA53_10140 PF00589 Phage integrase family IUA53_10140 PF13356 Arm DNA-binding domain IUA53_10160 PF01066 CDP-alcohol phosphatidyltransferase IUA53_10165 PF01541 GIY-YIG catalytic domain IUA53_10165 PF08459 UvrC Helix-hairpin-helix N-terminal IUA53_10165 PF02151 UvrB/uvrC motif IUA53_10170 PF00072 Response regulator receiver domain IUA53_10170 PF00196 Bacterial regulatory proteins, luxR family IUA53_10175 PF17954 Quercetinase C-terminal cupin domain IUA53_10175 PF02678 Pirin IUA53_10180 PF00155 Aminotransferase class I and II IUA53_10185 PF12867 DinB superfamily IUA53_10185 PF03781 Sulfatase-modifying factor enzyme 1 IUA53_10195 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IUA53_10200 PF07681 DoxX IUA53_10205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_10205 PF03466 LysR substrate binding domain IUA53_10220 PF01027 Inhibitor of apoptosis-promoting Bax1 IUA53_10225 PF02635 DsrE/DsrF-like family IUA53_10240 PF04358 DsrC like protein IUA53_10250 PF03783 Curli production assembly/transport component CsgG IUA53_10260 PF05643 Putative bacterial lipoprotein (DUF799) IUA53_10265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IUA53_10265 PF02403 Seryl-tRNA synthetase N-terminal domain IUA53_10270 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IUA53_10275 PF00004 ATPase family associated with various cellular activities (AAA) IUA53_10275 PF16193 AAA C-terminal domain IUA53_10275 PF12002 MgsA AAA+ ATPase C terminal IUA53_10280 PF03548 Outer membrane lipoprotein carrier protein LolA IUA53_10285 PF17854 FtsK alpha domain IUA53_10285 PF09397 Ftsk gamma domain IUA53_10285 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IUA53_10285 PF01580 FtsK/SpoIIIE family IUA53_10290 PF01037 Lrp/AsnC ligand binding domain IUA53_10295 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IUA53_10295 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IUA53_10300 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IUA53_10305 PF18073 Rubredoxin metal binding domain IUA53_10320 PF00216 Bacterial DNA-binding protein IUA53_10325 PF00575 S1 RNA binding domain IUA53_10330 PF02224 Cytidylate kinase IUA53_10335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IUA53_10340 PF00266 Aminotransferase class-V IUA53_10345 PF03989 DNA gyrase C-terminal domain, beta-propeller IUA53_10345 PF00521 DNA gyrase/topoisomerase IV, subunit A IUA53_10355 PF03477 ATP cone domain IUA53_10355 PF02867 Ribonucleotide reductase, barrel domain IUA53_10355 PF00317 Ribonucleotide reductase, all-alpha domain IUA53_10360 PF00268 Ribonucleotide reductase, small chain IUA53_10365 PF00111 2Fe-2S iron-sulfur cluster binding domain IUA53_10390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IUA53_10390 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_10395 PF00892 EamA-like transporter family IUA53_10400 PF01259 SAICAR synthetase IUA53_10405 PF06804 NlpB/DapX lipoprotein IUA53_10410 PF00701 Dihydrodipicolinate synthetase family IUA53_10420 PF00578 AhpC/TSA family IUA53_10430 PF01594 AI-2E family transporter IUA53_10435 PF01435 Peptidase family M48 IUA53_10435 PF13181 Tetratricopeptide repeat IUA53_10440 PF02683 Cytochrome C biogenesis protein transmembrane region IUA53_10440 PF11412 Disulphide bond corrector protein DsbC IUA53_10445 PF03960 ArsC family IUA53_10450 PF03358 NADPH-dependent FMN reductase IUA53_10465 PF13411 MerR HTH family regulatory protein IUA53_10480 PF01965 DJ-1/PfpI family IUA53_10495 PF00308 Bacterial dnaA protein IUA53_10505 PF02769 AIR synthase related protein, C-terminal domain IUA53_10505 PF00586 AIR synthase related protein, N-terminal domain IUA53_10510 PF00551 Formyl transferase IUA53_10520 PF09317 Domain of unknown function (DUF1974) IUA53_10520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUA53_10520 PF02770 Acyl-CoA dehydrogenase, middle domain IUA53_10520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUA53_10525 PF00196 Bacterial regulatory proteins, luxR family IUA53_10525 PF00072 Response regulator receiver domain IUA53_10530 PF13649 Methyltransferase domain IUA53_10535 PF08003 Protein of unknown function (DUF1698) IUA53_10555 PF00128 Alpha amylase, catalytic domain IUA53_10560 PF13419 Haloacid dehalogenase-like hydrolase IUA53_10565 PF03453 MoeA N-terminal region (domain I and II) IUA53_10565 PF03454 MoeA C-terminal region (domain IV) IUA53_10565 PF00994 Probable molybdopterin binding domain IUA53_10570 PF01554 MatE IUA53_10585 PF17862 AAA+ lid domain IUA53_10585 PF00004 ATPase family associated with various cellular activities (AAA) IUA53_10585 PF01434 Peptidase family M41 IUA53_10590 PF00291 Pyridoxal-phosphate dependent enzyme IUA53_10615 PF00378 Enoyl-CoA hydratase/isomerase IUA53_10630 PF00255 Glutathione peroxidase IUA53_10635 PF02525 Flavodoxin-like fold IUA53_10640 PF01053 Cys/Met metabolism PLP-dependent enzyme IUA53_10655 PF00155 Aminotransferase class I and II IUA53_10665 PF08267 Cobalamin-independent synthase, N-terminal domain IUA53_10665 PF01717 Cobalamin-independent synthase, Catalytic domain IUA53_10675 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IUA53_10690 PF12806 Acetyl-CoA dehydrogenase C-terminal like IUA53_10690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUA53_10690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUA53_10690 PF02770 Acyl-CoA dehydrogenase, middle domain IUA53_10695 PF02311 AraC-like ligand binding domain IUA53_10695 PF12833 Helix-turn-helix domain IUA53_10700 PF07715 TonB-dependent Receptor Plug Domain IUA53_10700 PF00593 TonB dependent receptor IUA53_10710 PF00873 AcrB/AcrD/AcrF family IUA53_10715 PF13533 Biotin-lipoyl like IUA53_10725 PF01012 Electron transfer flavoprotein domain IUA53_10725 PF00766 Electron transfer flavoprotein FAD-binding domain IUA53_10730 PF01012 Electron transfer flavoprotein domain IUA53_10740 PF00816 H-NS histone family IUA53_10745 PF12697 Alpha/beta hydrolase family IUA53_10755 PF00258 Flavodoxin IUA53_10765 PF01475 Ferric uptake regulator family IUA53_10770 PF01063 Amino-transferase class IV IUA53_10775 PF02626 Carboxyltransferase domain, subdomain A and B IUA53_10785 PF03746 LamB/YcsF family IUA53_10790 PF13509 S1 domain IUA53_10790 PF17783 CvfB-like winged helix domain IUA53_10795 PF02566 OsmC-like protein IUA53_10810 PF00155 Aminotransferase class I and II IUA53_10825 PF00196 Bacterial regulatory proteins, luxR family IUA53_10835 PF00593 TonB dependent receptor IUA53_10835 PF07715 TonB-dependent Receptor Plug Domain IUA53_10840 PF00174 Oxidoreductase molybdopterin binding domain IUA53_10845 PF01794 Ferric reductase like transmembrane component IUA53_10850 PF09335 SNARE associated Golgi protein IUA53_10860 PF02810 SEC-C motif IUA53_10875 PF00583 Acetyltransferase (GNAT) family IUA53_10880 PF00990 Diguanylate cyclase, GGDEF domain IUA53_10885 PF13460 NAD(P)H-binding IUA53_10895 PF01026 TatD related DNase IUA53_10900 PF09115 DNA polymerase III, delta subunit, C terminal IUA53_10905 PF02223 Thymidylate kinase IUA53_10910 PF02618 YceG-like family IUA53_10915 PF01063 Amino-transferase class IV IUA53_10920 PF00109 Beta-ketoacyl synthase, N-terminal domain IUA53_10920 PF02801 Beta-ketoacyl synthase, C-terminal domain IUA53_10925 PF00550 Phosphopantetheine attachment site IUA53_10935 PF00698 Acyl transferase domain IUA53_10940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IUA53_10940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IUA53_10945 PF02504 Fatty acid synthesis protein IUA53_10950 PF01783 Ribosomal L32p protein family IUA53_10955 PF02620 Large ribosomal RNA subunit accumulation protein YceD IUA53_10960 PF02545 Maf-like protein IUA53_10965 PF13419 Haloacid dehalogenase-like hydrolase IUA53_10970 PF00849 RNA pseudouridylate synthase IUA53_10970 PF01479 S4 domain IUA53_10975 PF10150 Ribonuclease E/G family IUA53_10975 PF00575 S1 RNA binding domain IUA53_10975 PF12111 Polyribonucleotide phosphorylase C terminal IUA53_10985 PF13419 Haloacid dehalogenase-like hydrolase IUA53_10990 PF13673 Acetyltransferase (GNAT) domain IUA53_10995 PF00962 Adenosine/AMP deaminase IUA53_11000 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IUA53_11005 PF01396 Topoisomerase DNA binding C4 zinc finger IUA53_11005 PF01751 Toprim domain IUA53_11005 PF08272 Topoisomerase I zinc-ribbon-like IUA53_11005 PF01131 DNA topoisomerase IUA53_11010 PF04996 Succinylarginine dihydrolase IUA53_11020 PF00375 Sodium:dicarboxylate symporter family IUA53_11025 PF12704 MacB-like periplasmic core domain IUA53_11025 PF02687 FtsX-like permease family IUA53_11030 PF00005 ABC transporter IUA53_11035 PF00563 EAL domain IUA53_11035 PF12792 CSS motif domain associated with EAL IUA53_11065 PF00929 Exonuclease IUA53_11070 PF00075 RNase H IUA53_11075 PF00550 Phosphopantetheine attachment site IUA53_11075 PF00698 Acyl transferase domain IUA53_11075 PF08240 Alcohol dehydrogenase GroES-like domain IUA53_11075 PF14765 Polyketide synthase dehydratase IUA53_11075 PF08659 KR domain IUA53_11075 PF02801 Beta-ketoacyl synthase, C-terminal domain IUA53_11075 PF00109 Beta-ketoacyl synthase, N-terminal domain IUA53_11075 PF16197 Ketoacyl-synthetase C-terminal extension IUA53_11080 PF17785 PUA-like domain IUA53_11080 PF10672 S-adenosylmethionine-dependent methyltransferase IUA53_11095 PF00271 Helicase conserved C-terminal domain IUA53_11095 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IUA53_11095 PF04408 Helicase associated domain (HA2) IUA53_11095 PF11898 Domain of unknown function (DUF3418) IUA53_11095 PF00270 DEAD/DEAH box helicase IUA53_11120 PF16656 Purple acid Phosphatase, N-terminal domain IUA53_11120 PF00149 Calcineurin-like phosphoesterase IUA53_11135 PF00929 Exonuclease IUA53_11135 PF08411 Exonuclease C-terminal IUA53_11150 PF02803 Thiolase, C-terminal domain IUA53_11150 PF00108 Thiolase, N-terminal domain IUA53_11155 PF13411 MerR HTH family regulatory protein IUA53_11160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUA53_11160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUA53_11160 PF02770 Acyl-CoA dehydrogenase, middle domain IUA53_11165 PF01039 Carboxyl transferase domain IUA53_11175 PF18140 Propionyl-coenzyme A carboxylase BT domain IUA53_11175 PF02785 Biotin carboxylase C-terminal domain IUA53_11175 PF00289 Biotin carboxylase, N-terminal domain IUA53_11175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IUA53_11175 PF00364 Biotin-requiring enzyme IUA53_11180 PF00682 HMGL-like IUA53_11195 PF00483 Nucleotidyl transferase IUA53_11205 PF07690 Major Facilitator Superfamily IUA53_11240 PF03372 Endonuclease/Exonuclease/phosphatase family IUA53_11250 PF00156 Phosphoribosyl transferase domain IUA53_11255 PF12704 MacB-like periplasmic core domain IUA53_11255 PF02687 FtsX-like permease family IUA53_11265 PF00270 DEAD/DEAH box helicase IUA53_11265 PF03461 TRCF domain IUA53_11265 PF02559 CarD-like/TRCF domain IUA53_11265 PF17757 UvrB interaction domain IUA53_11265 PF00271 Helicase conserved C-terminal domain IUA53_11275 PF01923 Cobalamin adenosyltransferase IUA53_11280 PF00933 Glycosyl hydrolase family 3 N terminal domain IUA53_11290 PF04073 Aminoacyl-tRNA editing domain IUA53_11300 PF00216 Bacterial DNA-binding protein IUA53_11305 PF03483 B3/4 domain IUA53_11305 PF01588 Putative tRNA binding domain IUA53_11305 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IUA53_11305 PF03147 Ferredoxin-fold anticodon binding domain IUA53_11305 PF03484 tRNA synthetase B5 domain IUA53_11310 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IUA53_11310 PF01409 tRNA synthetases class II core domain (F) IUA53_11315 PF01757 Acyltransferase family IUA53_11330 PF14667 Polysaccharide biosynthesis C-terminal domain IUA53_11350 PF00534 Glycosyl transferases group 1 IUA53_11350 PF13439 Glycosyltransferase Family 4 IUA53_11355 PF13579 Glycosyl transferase 4-like domain IUA53_11355 PF00534 Glycosyl transferases group 1 IUA53_11365 PF00534 Glycosyl transferases group 1 IUA53_11370 PF01757 Acyltransferase family IUA53_11375 PF04932 O-Antigen ligase IUA53_11380 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 IUA53_11380 PF00535 Glycosyl transferase family 2 IUA53_11385 PF00534 Glycosyl transferases group 1 IUA53_11385 PF13439 Glycosyltransferase Family 4 IUA53_11395 PF03707 Bacterial signalling protein N terminal repeat IUA53_11395 PF13188 PAS domain IUA53_11395 PF00563 EAL domain IUA53_11395 PF00990 Diguanylate cyclase, GGDEF domain IUA53_11410 PF00534 Glycosyl transferases group 1 IUA53_11410 PF13439 Glycosyltransferase Family 4 IUA53_11425 PF13614 AAA domain IUA53_11430 PF18412 Outer-membrane lipoprotein Wza C-terminal domain IUA53_11430 PF02563 Polysaccharide biosynthesis/export protein IUA53_11430 PF10531 SLBB domain IUA53_11440 PF02397 Bacterial sugar transferase IUA53_11445 PF00453 Ribosomal protein L20 IUA53_11450 PF01632 Ribosomal protein L35 IUA53_11455 PF00707 Translation initiation factor IF-3, C-terminal domain IUA53_11455 PF05198 Translation initiation factor IF-3, N-terminal domain IUA53_11460 PF03129 Anticodon binding domain IUA53_11460 PF02824 TGS domain IUA53_11460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IUA53_11460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IUA53_11465 PF03881 Fructosamine kinase IUA53_11500 PF01425 Amidase IUA53_11510 PF01925 Sulfite exporter TauE/SafE IUA53_11515 PF00266 Aminotransferase class-V IUA53_11520 PF07687 Peptidase dimerisation domain IUA53_11520 PF01546 Peptidase family M20/M25/M40 IUA53_11535 PF00860 Permease family IUA53_11540 PF07715 TonB-dependent Receptor Plug Domain IUA53_11540 PF00593 TonB dependent receptor IUA53_11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_11560 PF00512 His Kinase A (phospho-acceptor) domain IUA53_11560 PF09308 LuxQ, periplasmic IUA53_11560 PF00072 Response regulator receiver domain IUA53_11565 PF00990 Diguanylate cyclase, GGDEF domain IUA53_11565 PF00072 Response regulator receiver domain IUA53_11570 PF03707 Bacterial signalling protein N terminal repeat IUA53_11570 PF00563 EAL domain IUA53_11570 PF00990 Diguanylate cyclase, GGDEF domain IUA53_11580 PF00962 Adenosine/AMP deaminase IUA53_11585 PF00860 Permease family IUA53_11600 PF08362 YcdC-like protein, C-terminal region IUA53_11600 PF00440 Bacterial regulatory proteins, tetR family IUA53_11605 PF00111 2Fe-2S iron-sulfur cluster binding domain IUA53_11605 PF01799 [2Fe-2S] binding domain IUA53_11610 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IUA53_11610 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IUA53_11625 PF00576 HIUase/Transthyretin family IUA53_11630 PF01979 Amidohydrolase family IUA53_11640 PF08447 PAS fold IUA53_11640 PF05231 MASE1 IUA53_11640 PF00990 Diguanylate cyclase, GGDEF domain IUA53_11640 PF00563 EAL domain IUA53_11640 PF13426 PAS domain IUA53_11640 PF08448 PAS fold IUA53_11650 PF00091 Tubulin/FtsZ family, GTPase domain IUA53_11650 PF12327 FtsZ family, C-terminal domain IUA53_11665 PF04209 homogentisate 1,2-dioxygenase IUA53_11670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IUA53_11690 PF03960 ArsC family IUA53_11695 PF01546 Peptidase family M20/M25/M40 IUA53_11695 PF07687 Peptidase dimerisation domain IUA53_11710 PF01906 Putative heavy-metal-binding IUA53_11720 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IUA53_11725 PF03707 Bacterial signalling protein N terminal repeat IUA53_11725 PF00563 EAL domain IUA53_11725 PF00990 Diguanylate cyclase, GGDEF domain IUA53_11730 PF00343 Carbohydrate phosphorylase IUA53_11735 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IUA53_11735 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IUA53_11735 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IUA53_11735 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IUA53_11740 PF17206 SeqA protein N-terminal domain IUA53_11740 PF03925 SeqA protein C-terminal domain IUA53_11745 PF01226 Formate/nitrite transporter IUA53_11750 PF00069 Protein kinase domain IUA53_11750 PF03793 PASTA domain IUA53_11755 PF02560 Cyanate lyase C-terminal domain IUA53_11765 PF14492 Elongation Factor G, domain II IUA53_11765 PF00679 Elongation factor G C-terminus IUA53_11765 PF03764 Elongation factor G, domain IV IUA53_11765 PF00009 Elongation factor Tu GTP binding domain IUA53_11765 PF03144 Elongation factor Tu domain 2 IUA53_11770 PF18125 RlmM ferredoxin-like domain IUA53_11770 PF01728 FtsJ-like methyltransferase IUA53_11775 PF04241 Protein of unknown function (DUF423) IUA53_11785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_11785 PF03466 LysR substrate binding domain IUA53_11795 PF00793 DAHP synthetase I family IUA53_11800 PF04247 Invasion gene expression up-regulator, SirB IUA53_11805 PF11849 Domain of unknown function (DUF3369) IUA53_11810 PF13847 Methyltransferase domain IUA53_11810 PF17827 PrmC N-terminal domain IUA53_11815 PF00472 RF-1 domain IUA53_11815 PF03462 PCRF domain IUA53_11820 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IUA53_11820 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IUA53_11820 PF01488 Shikimate / quinate 5-dehydrogenase IUA53_11825 PF03550 Outer membrane lipoprotein LolB IUA53_11830 PF08544 GHMP kinases C terminal IUA53_11830 PF00288 GHMP kinases N terminal domain IUA53_11840 PF14572 Phosphoribosyl synthetase-associated domain IUA53_11840 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IUA53_11855 PF14693 Ribosomal protein TL5, C-terminal domain IUA53_11855 PF01386 Ribosomal L25p family IUA53_11860 PF01195 Peptidyl-tRNA hydrolase IUA53_11865 PF01926 50S ribosome-binding GTPase IUA53_11865 PF06071 Protein of unknown function (DUF933) IUA53_11925 PF01235 Sodium:alanine symporter family IUA53_11930 PF01613 Flavin reductase like domain IUA53_11935 PF03061 Thioesterase superfamily IUA53_11960 PF01494 FAD binding domain IUA53_11965 PF00919 Uncharacterized protein family UPF0004 IUA53_11965 PF01938 TRAM domain IUA53_11965 PF04055 Radical SAM superfamily IUA53_11970 PF02562 PhoH-like protein IUA53_11975 PF02130 Uncharacterized protein family UPF0054 IUA53_11985 PF01370 NAD dependent epimerase/dehydratase family IUA53_11990 PF02397 Bacterial sugar transferase IUA53_11995 PF00571 CBS domain IUA53_11995 PF03471 Transporter associated domain IUA53_12000 PF00795 Carbon-nitrogen hydrolase IUA53_12005 PF07085 DRTGG domain IUA53_12005 PF01515 Phosphate acetyl/butaryl transferase IUA53_12010 PF00871 Acetokinase family IUA53_12015 PF00011 Hsp20/alpha crystallin family IUA53_12025 PF12729 Four helix bundle sensory module for signal transduction IUA53_12025 PF00672 HAMP domain IUA53_12025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_12030 PF01272 Transcription elongation factor, GreA/GreB, C-term IUA53_12030 PF03449 Transcription elongation factor, N-terminal IUA53_12035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IUA53_12035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IUA53_12035 PF02142 MGS-like domain IUA53_12040 PF00117 Glutamine amidotransferase class-I IUA53_12040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IUA53_12045 PF05173 Dihydrodipicolinate reductase, C-terminus IUA53_12045 PF01113 Dihydrodipicolinate reductase, N-terminus IUA53_12055 PF03707 Bacterial signalling protein N terminal repeat IUA53_12055 PF00563 EAL domain IUA53_12055 PF00990 Diguanylate cyclase, GGDEF domain IUA53_12060 PF01322 Cytochrome C' IUA53_12065 PF01556 DnaJ C terminal domain IUA53_12065 PF00684 DnaJ central domain IUA53_12065 PF00226 DnaJ domain IUA53_12070 PF00012 Hsp70 protein IUA53_12075 PF01025 GrpE IUA53_12080 PF00989 PAS fold IUA53_12080 PF00512 His Kinase A (phospho-acceptor) domain IUA53_12080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_12090 PF00072 Response regulator receiver domain IUA53_12090 PF00196 Bacterial regulatory proteins, luxR family IUA53_12095 PF00593 TonB dependent receptor IUA53_12095 PF07715 TonB-dependent Receptor Plug Domain IUA53_12105 PF00561 alpha/beta hydrolase fold IUA53_12120 PF01513 ATP-NAD kinase IUA53_12125 PF00210 Ferritin-like domain IUA53_12135 PF02463 RecF/RecN/SMC N terminal domain IUA53_12140 PF04355 SmpA / OmlA family IUA53_12145 PF05724 Thiopurine S-methyltransferase (TPMT) IUA53_12150 PF04286 Protein of unknown function (DUF445) IUA53_12155 PF03960 ArsC family IUA53_12165 PF12464 Maltose acetyltransferase IUA53_12165 PF14602 Hexapeptide repeat of succinyl-transferase IUA53_12170 PF00248 Aldo/keto reductase family IUA53_12175 PF00849 RNA pseudouridylate synthase IUA53_12175 PF01479 S4 domain IUA53_12180 PF04079 Segregation and condensation complex subunit ScpB IUA53_12185 PF02616 Segregation and condensation protein ScpA IUA53_12190 PF01300 Telomere recombination IUA53_12195 PF02811 PHP domain IUA53_12200 PF04715 Anthranilate synthase component I, N terminal region IUA53_12200 PF00425 chorismate binding enzyme IUA53_12205 PF00117 Glutamine amidotransferase class-I IUA53_12210 PF02885 Glycosyl transferase family, helical bundle domain IUA53_12210 PF00591 Glycosyl transferase family, a/b domain IUA53_12215 PF00218 Indole-3-glycerol phosphate synthase IUA53_12215 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IUA53_12220 PF00291 Pyridoxal-phosphate dependent enzyme IUA53_12225 PF00290 Tryptophan synthase alpha chain IUA53_12230 PF03795 YCII-related domain IUA53_12245 PF00072 Response regulator receiver domain IUA53_12245 PF00486 Transcriptional regulatory protein, C terminal IUA53_12250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_12255 PF01594 AI-2E family transporter IUA53_12260 PF02152 Dihydroneopterin aldolase IUA53_12265 PF01370 NAD dependent epimerase/dehydratase family IUA53_12265 PF08338 Domain of unknown function (DUF1731) IUA53_12275 PF00005 ABC transporter IUA53_12280 PF13472 GDSL-like Lipase/Acylhydrolase family IUA53_12300 PF01979 Amidohydrolase family IUA53_12305 PF01207 Dihydrouridine synthase (Dus) IUA53_12350 PF00749 tRNA synthetases class I (E and Q), catalytic domain IUA53_12380 PF06463 Molybdenum Cofactor Synthesis C IUA53_12380 PF04055 Radical SAM superfamily IUA53_12385 PF00664 ABC transporter transmembrane region IUA53_12385 PF00005 ABC transporter IUA53_12395 PF00072 Response regulator receiver domain IUA53_12395 PF04397 LytTr DNA-binding domain IUA53_12400 PF06580 Histidine kinase IUA53_12400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_12405 PF00005 ABC transporter IUA53_12405 PF13732 Domain of unknown function (DUF4162) IUA53_12415 PF01474 Class-II DAHP synthetase family IUA53_12420 PF01451 Low molecular weight phosphotyrosine protein phosphatase IUA53_12425 PF03575 Peptidase family S51 IUA53_12435 PF08241 Methyltransferase domain IUA53_12435 PF12697 Alpha/beta hydrolase family IUA53_12440 PF00155 Aminotransferase class I and II IUA53_12445 PF04055 Radical SAM superfamily IUA53_12445 PF06968 Biotin and Thiamin Synthesis associated domain IUA53_12450 PF00202 Aminotransferase class-III IUA53_12470 PF08443 RimK-like ATP-grasp domain IUA53_12470 PF18030 RimK PreATP-grasp domain IUA53_12475 PF01699 Sodium/calcium exchanger protein IUA53_12485 PF01336 OB-fold nucleic acid binding domain IUA53_12485 PF00152 tRNA synthetases class II (D, K and N) IUA53_12490 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain IUA53_12490 PF00326 Prolyl oligopeptidase family IUA53_12500 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system IUA53_12515 PF00144 Beta-lactamase IUA53_12520 PF01381 Helix-turn-helix IUA53_12540 PF04403 Paraquat-inducible protein A IUA53_12545 PF02470 MlaD protein IUA53_12555 PF03707 Bacterial signalling protein N terminal repeat IUA53_12555 PF00563 EAL domain IUA53_12555 PF00990 Diguanylate cyclase, GGDEF domain IUA53_12560 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUA53_12565 PF00873 AcrB/AcrD/AcrF family IUA53_12580 PF00873 AcrB/AcrD/AcrF family IUA53_12590 PF00550 Phosphopantetheine attachment site IUA53_12590 PF14765 Polyketide synthase dehydratase IUA53_12590 PF08240 Alcohol dehydrogenase GroES-like domain IUA53_12590 PF08659 KR domain IUA53_12590 PF00698 Acyl transferase domain IUA53_12595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_12595 PF03466 LysR substrate binding domain IUA53_12600 PF01292 Prokaryotic cytochrome b561 IUA53_12605 PF06628 Catalase-related immune-responsive IUA53_12605 PF18011 C-terminal domain found in long catalases IUA53_12605 PF00199 Catalase IUA53_12610 PF00106 short chain dehydrogenase IUA53_12615 PF00296 Luciferase-like monooxygenase IUA53_12620 PF02774 Semialdehyde dehydrogenase, dimerisation domain IUA53_12620 PF01118 Semialdehyde dehydrogenase, NAD binding domain IUA53_12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_12630 PF09308 LuxQ, periplasmic IUA53_12630 PF00072 Response regulator receiver domain IUA53_12630 PF00512 His Kinase A (phospho-acceptor) domain IUA53_12635 PF00675 Insulinase (Peptidase family M16) IUA53_12635 PF05193 Peptidase M16 inactive domain IUA53_12640 PF01734 Patatin-like phospholipase IUA53_12645 PF13419 Haloacid dehalogenase-like hydrolase IUA53_12685 PF02445 Quinolinate synthetase A protein IUA53_12715 PF13174 Tetratricopeptide repeat IUA53_12715 PF16331 TolA binding protein trimerisation IUA53_12720 PF00691 OmpA family IUA53_12725 PF04052 TolB amino-terminal domain IUA53_12725 PF07676 WD40-like Beta Propeller Repeat IUA53_12735 PF02472 Biopolymer transport protein ExbD/TolR IUA53_12740 PF01618 MotA/TolQ/ExbB proton channel family IUA53_12745 PF03061 Thioesterase superfamily IUA53_12750 PF17864 RuvB AAA lid domain IUA53_12750 PF05491 RuvB C-terminal winged helix domain IUA53_12750 PF05496 Holliday junction DNA helicase RuvB P-loop domain IUA53_12755 PF01330 RuvA N terminal domain IUA53_12755 PF07499 RuvA, C-terminal domain IUA53_12760 PF02075 Crossover junction endodeoxyribonuclease RuvC IUA53_12765 PF00293 NUDIX domain IUA53_12770 PF00152 tRNA synthetases class II (D, K and N) IUA53_12770 PF01336 OB-fold nucleic acid binding domain IUA53_12770 PF02938 GAD domain IUA53_12775 PF01904 Protein of unknown function DUF72 IUA53_12780 PF00158 Sigma-54 interaction domain IUA53_12780 PF00072 Response regulator receiver domain IUA53_12790 PF00512 His Kinase A (phospho-acceptor) domain IUA53_12790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_12800 PF00563 EAL domain IUA53_12800 PF03707 Bacterial signalling protein N terminal repeat IUA53_12800 PF00990 Diguanylate cyclase, GGDEF domain IUA53_12810 PF00486 Transcriptional regulatory protein, C terminal IUA53_12810 PF00072 Response regulator receiver domain IUA53_12820 PF01253 Translation initiation factor SUI1 IUA53_12825 PF00072 Response regulator receiver domain IUA53_12830 PF01817 Chorismate mutase type II IUA53_12830 PF00800 Prephenate dehydratase IUA53_12835 PF02153 Prephenate dehydrogenase IUA53_12835 PF01817 Chorismate mutase type II IUA53_12840 PF00793 DAHP synthetase I family IUA53_12845 PF00378 Enoyl-CoA hydratase/isomerase IUA53_12850 PF03458 UPF0126 domain IUA53_12855 PF01245 Ribosomal protein L19 IUA53_12860 PF01746 tRNA (Guanine-1)-methyltransferase IUA53_12865 PF01782 RimM N-terminal domain IUA53_12865 PF05239 PRC-barrel domain IUA53_12870 PF00886 Ribosomal protein S16 IUA53_12885 PF01053 Cys/Met metabolism PLP-dependent enzyme IUA53_12890 PF00664 ABC transporter transmembrane region IUA53_12890 PF00005 ABC transporter IUA53_12895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUA53_12900 PF00873 AcrB/AcrD/AcrF family IUA53_12935 PF00448 SRP54-type protein, GTPase domain IUA53_12935 PF02881 SRP54-type protein, helical bundle domain IUA53_12935 PF02978 Signal peptide binding domain IUA53_12940 PF01578 Cytochrome C assembly protein IUA53_12945 PF01595 Cyclin M transmembrane N-terminal domain IUA53_12945 PF03471 Transporter associated domain IUA53_12945 PF00571 CBS domain IUA53_12955 PF00300 Histidine phosphatase superfamily (branch 1) IUA53_12960 PF00675 Insulinase (Peptidase family M16) IUA53_12960 PF05193 Peptidase M16 inactive domain IUA53_12965 PF03707 Bacterial signalling protein N terminal repeat IUA53_12965 PF00990 Diguanylate cyclase, GGDEF domain IUA53_12965 PF00563 EAL domain IUA53_12980 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IUA53_12980 PF00378 Enoyl-CoA hydratase/isomerase IUA53_12980 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IUA53_12985 PF00108 Thiolase, N-terminal domain IUA53_12985 PF02803 Thiolase, C-terminal domain IUA53_12990 PF17863 AAA lid domain IUA53_12990 PF07726 ATPase family associated with various cellular activities (AAA) IUA53_12995 PF01882 Protein of unknown function DUF58 IUA53_13005 PF00092 von Willebrand factor type A domain IUA53_13010 PF07584 Aerotolerance regulator N-terminal IUA53_13010 PF00092 von Willebrand factor type A domain IUA53_13025 PF04542 Sigma-70 region 2 IUA53_13025 PF08281 Sigma-70, region 4 IUA53_13035 PF00990 Diguanylate cyclase, GGDEF domain IUA53_13040 PF00474 Sodium:solute symporter family IUA53_13045 PF01507 Phosphoadenosine phosphosulfate reductase family IUA53_13055 PF00459 Inositol monophosphatase family IUA53_13060 PF00009 Elongation factor Tu GTP binding domain IUA53_13065 PF03600 Citrate transporter IUA53_13065 PF02080 TrkA-C domain IUA53_13090 PF00733 Asparagine synthase IUA53_13090 PF13537 Glutamine amidotransferase domain IUA53_13100 PF04055 Radical SAM superfamily IUA53_13105 PF06508 Queuosine biosynthesis protein QueC IUA53_13125 PF00271 Helicase conserved C-terminal domain IUA53_13125 PF02151 UvrB/uvrC motif IUA53_13125 PF12344 Ultra-violet resistance protein B IUA53_13125 PF17757 UvrB interaction domain IUA53_13125 PF04851 Type III restriction enzyme, res subunit IUA53_13130 PF01554 MatE IUA53_13145 PF02508 Rnf-Nqr subunit, membrane protein IUA53_13150 PF04060 Putative Fe-S cluster IUA53_13155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IUA53_13155 PF12838 4Fe-4S dicluster domain IUA53_13155 PF10531 SLBB domain IUA53_13155 PF13375 RnfC Barrel sandwich hybrid domain IUA53_13160 PF03116 NQR2, RnfD, RnfE family IUA53_13165 PF04205 FMN-binding domain IUA53_13170 PF02508 Rnf-Nqr subunit, membrane protein IUA53_13175 PF10576 Iron-sulfur binding domain of endonuclease III IUA53_13175 PF00633 Helix-hairpin-helix motif IUA53_13175 PF00730 HhH-GPD superfamily base excision DNA repair protein IUA53_13180 PF00144 Beta-lactamase IUA53_13190 PF03466 LysR substrate binding domain IUA53_13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_13230 PF02371 Transposase IS116/IS110/IS902 family IUA53_13230 PF01548 Transposase IUA53_13270 PF00144 Beta-lactamase IUA53_13320 PF00486 Transcriptional regulatory protein, C terminal IUA53_13320 PF18500 CadC C-terminal domain 1 IUA53_13335 PF00990 Diguanylate cyclase, GGDEF domain IUA53_13335 PF17151 Periplasmic sensor domain IUA53_13340 PF00313 'Cold-shock' DNA-binding domain IUA53_13345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IUA53_13350 PF03009 Glycerophosphoryl diester phosphodiesterase family IUA53_13355 PF18393 MotY N-terminal domain IUA53_13355 PF00691 OmpA family IUA53_13360 PF00929 Exonuclease IUA53_13365 PF04324 BFD-like [2Fe-2S] binding domain IUA53_13385 PF00593 TonB dependent receptor IUA53_13385 PF07715 TonB-dependent Receptor Plug Domain IUA53_13390 PF00462 Glutaredoxin IUA53_13395 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IUA53_13395 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IUA53_13400 PF08298 PrkA AAA domain IUA53_13400 PF06798 PrkA serine protein kinase C-terminal domain IUA53_13405 PF04285 Protein of unknown function (DUF444) IUA53_13410 PF04293 SpoVR like protein IUA53_13425 PF01264 Chorismate synthase IUA53_13430 PF05175 Methyltransferase small domain IUA53_13435 PF01713 Smr domain IUA53_13445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_13445 PF00512 His Kinase A (phospho-acceptor) domain IUA53_13445 PF00989 PAS fold IUA53_13450 PF00158 Sigma-54 interaction domain IUA53_13450 PF02954 Bacterial regulatory protein, Fis family IUA53_13450 PF00072 Response regulator receiver domain IUA53_13455 PF12704 MacB-like periplasmic core domain IUA53_13455 PF00005 ABC transporter IUA53_13455 PF02687 FtsX-like permease family IUA53_13465 PF00005 ABC transporter IUA53_13470 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IUA53_13480 PF04262 Glutamate-cysteine ligase IUA53_13485 PF05193 Peptidase M16 inactive domain IUA53_13485 PF00675 Insulinase (Peptidase family M16) IUA53_13495 PF00849 RNA pseudouridylate synthase IUA53_13500 PF08546 Ketopantoate reductase PanE/ApbA C terminal IUA53_13500 PF02558 Ketopantoate reductase PanE/ApbA IUA53_13505 PF01336 OB-fold nucleic acid binding domain IUA53_13505 PF00152 tRNA synthetases class II (D, K and N) IUA53_13515 PF00485 Phosphoribulokinase / Uridine kinase family IUA53_13565 PF00175 Oxidoreductase NAD-binding domain IUA53_13565 PF00111 2Fe-2S iron-sulfur cluster binding domain IUA53_13565 PF00970 Oxidoreductase FAD-binding domain IUA53_13570 PF00487 Fatty acid desaturase IUA53_13585 PF00291 Pyridoxal-phosphate dependent enzyme IUA53_13590 PF01979 Amidohydrolase family IUA53_13595 PF01156 Inosine-uridine preferring nucleoside hydrolase IUA53_13605 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region IUA53_13605 PF00326 Prolyl oligopeptidase family IUA53_13610 PF05746 DALR anticodon binding domain IUA53_13610 PF00750 tRNA synthetases class I (R) IUA53_13610 PF03485 Arginyl tRNA synthetase N terminal domain IUA53_13615 PF16658 Class II release factor RF3, C-terminal domain IUA53_13615 PF03144 Elongation factor Tu domain 2 IUA53_13615 PF00009 Elongation factor Tu GTP binding domain IUA53_13620 PF00717 Peptidase S24-like IUA53_13620 PF01381 Helix-turn-helix IUA53_13665 PF06122 Conjugative relaxosome accessory transposon protein IUA53_13680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_13680 PF03466 LysR substrate binding domain IUA53_13700 PF04002 RadC-like JAB domain IUA53_13705 PF00092 von Willebrand factor type A domain IUA53_13725 PF08406 CbbQ/NirQ/NorQ C-terminal IUA53_13725 PF07728 AAA domain (dynein-related subfamily) IUA53_13745 PF00436 Single-strand binding protein family IUA53_13760 PF00004 ATPase family associated with various cellular activities (AAA) IUA53_13765 PF00082 Subtilase family IUA53_13775 PF00580 UvrD/REP helicase N-terminal domain IUA53_13775 PF13361 UvrD-like helicase C-terminal domain IUA53_13780 PF06986 Type-1V conjugative transfer system mating pair stabilisation IUA53_13785 PF06834 TraU protein IUA53_13795 PF10502 Signal peptidase, peptidase S26 IUA53_13810 PF10411 Disulfide bond isomerase protein N-terminus IUA53_13810 PF13098 Thioredoxin-like domain IUA53_13830 PF00873 AcrB/AcrD/AcrF family IUA53_13835 PF00873 AcrB/AcrD/AcrF family IUA53_13840 PF00873 AcrB/AcrD/AcrF family IUA53_13855 PF02321 Outer membrane efflux protein IUA53_13860 PF00873 AcrB/AcrD/AcrF family IUA53_13870 PF00403 Heavy-metal-associated domain IUA53_13885 PF01545 Cation efflux family IUA53_13895 PF01022 Bacterial regulatory protein, arsR family IUA53_13905 PF09278 MerR, DNA binding IUA53_13905 PF00376 MerR family regulatory protein IUA53_13915 PF09278 MerR, DNA binding IUA53_13915 PF00376 MerR family regulatory protein IUA53_13960 PF01695 IstB-like ATP binding protein IUA53_13980 PF01814 Hemerythrin HHE cation binding domain IUA53_13990 PF00873 AcrB/AcrD/AcrF family IUA53_14000 PF00440 Bacterial regulatory proteins, tetR family IUA53_14040 PF03466 LysR substrate binding domain IUA53_14040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_14050 PF02770 Acyl-CoA dehydrogenase, middle domain IUA53_14050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUA53_14050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUA53_14065 PF00034 Cytochrome c IUA53_14070 PF01593 Flavin containing amine oxidoreductase IUA53_14075 PF00593 TonB dependent receptor IUA53_14075 PF07715 TonB-dependent Receptor Plug Domain IUA53_14080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IUA53_14080 PF12833 Helix-turn-helix domain IUA53_14090 PF00884 Sulfatase IUA53_14095 PF07690 Major Facilitator Superfamily IUA53_14100 PF00082 Subtilase family IUA53_14105 PF00005 ABC transporter IUA53_14105 PF00664 ABC transporter transmembrane region IUA53_14120 PF00501 AMP-binding enzyme IUA53_14120 PF13193 AMP-binding enzyme C-terminal domain IUA53_14130 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit IUA53_14145 PF00171 Aldehyde dehydrogenase family IUA53_14165 PF01451 Low molecular weight phosphotyrosine protein phosphatase IUA53_14270 PF01420 Type I restriction modification DNA specificity domain IUA53_14290 PF11490 DNA polymerase III polC-type N-terminus II IUA53_14290 PF07733 Bacterial DNA polymerase III alpha NTPase domain IUA53_14290 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IUA53_14290 PF02811 PHP domain IUA53_14290 PF00929 Exonuclease IUA53_14290 PF14579 Helix-hairpin-helix motif IUA53_14295 PF00717 Peptidase S24-like IUA53_14320 PF01695 IstB-like ATP binding protein IUA53_14325 PF00665 Integrase core domain IUA53_14355 PF01695 IstB-like ATP binding protein IUA53_14360 PF00665 Integrase core domain IUA53_14370 PF05552 Conserved TM helix IUA53_14370 PF00924 Mechanosensitive ion channel IUA53_14375 PF01699 Sodium/calcium exchanger protein IUA53_14405 PF13657 HipA N-terminal domain IUA53_14405 PF07804 HipA-like C-terminal domain IUA53_14410 PF01381 Helix-turn-helix IUA53_14415 PF16658 Class II release factor RF3, C-terminal domain IUA53_14415 PF00009 Elongation factor Tu GTP binding domain IUA53_14415 PF03144 Elongation factor Tu domain 2 IUA53_14420 PF05230 MASE2 domain IUA53_14420 PF00990 Diguanylate cyclase, GGDEF domain IUA53_14430 PF07690 Major Facilitator Superfamily IUA53_14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_14435 PF03466 LysR substrate binding domain IUA53_14450 PF00583 Acetyltransferase (GNAT) family IUA53_14465 PF01636 Phosphotransferase enzyme family IUA53_14490 PF05127 Helicase IUA53_14490 PF13718 GNAT acetyltransferase 2 IUA53_14500 PF03544 Gram-negative bacterial TonB protein C-terminal IUA53_14505 PF02472 Biopolymer transport protein ExbD/TolR IUA53_14510 PF01618 MotA/TolQ/ExbB proton channel family IUA53_14515 PF01618 MotA/TolQ/ExbB proton channel family IUA53_14530 PF00593 TonB dependent receptor IUA53_14545 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IUA53_14545 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IUA53_14550 PF01037 Lrp/AsnC ligand binding domain IUA53_14555 PF14497 Glutathione S-transferase, C-terminal domain IUA53_14555 PF02798 Glutathione S-transferase, N-terminal domain IUA53_14565 PF00158 Sigma-54 interaction domain IUA53_14565 PF18024 Helix-turn-helix domain IUA53_14570 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IUA53_14580 PF06667 Phage shock protein B IUA53_14585 PF04012 PspA/IM30 family IUA53_14590 PF02954 Bacterial regulatory protein, Fis family IUA53_14590 PF00158 Sigma-54 interaction domain IUA53_14595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IUA53_14600 PF00528 Binding-protein-dependent transport system inner membrane component IUA53_14605 PF12911 N-terminal TM domain of oligopeptide transport permease C IUA53_14605 PF00528 Binding-protein-dependent transport system inner membrane component IUA53_14610 PF00005 ABC transporter IUA53_14610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IUA53_14615 PF00005 ABC transporter IUA53_14620 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit IUA53_14625 PF00682 HMGL-like IUA53_14625 PF02436 Conserved carboxylase domain IUA53_14625 PF00364 Biotin-requiring enzyme IUA53_14650 PF02599 Global regulator protein family IUA53_14655 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IUA53_14655 PF01411 tRNA synthetases class II (A) IUA53_14655 PF02272 DHHA1 domain IUA53_14660 PF02631 RecX family IUA53_14670 PF05649 Peptidase family M13 IUA53_14670 PF01431 Peptidase family M13 IUA53_14675 PF01740 STAS domain IUA53_14675 PF00916 Sulfate permease family IUA53_14680 PF00484 Carbonic anhydrase IUA53_14685 PF03466 LysR substrate binding domain IUA53_14685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_14690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_14690 PF03466 LysR substrate binding domain IUA53_14695 PF06865 Pyrimidine/purine nucleoside phosphorylase IUA53_14700 PF02743 Cache domain IUA53_14700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_14700 PF00672 HAMP domain IUA53_14710 PF02607 B12 binding domain IUA53_14710 PF00809 Pterin binding enzyme IUA53_14710 PF02965 Vitamin B12 dependent methionine synthase, activation domain IUA53_14710 PF02310 B12 binding domain IUA53_14710 PF02574 Homocysteine S-methyltransferase IUA53_14715 PF02574 Homocysteine S-methyltransferase IUA53_14715 PF02607 B12 binding domain IUA53_14715 PF02310 B12 binding domain IUA53_14715 PF00809 Pterin binding enzyme IUA53_14715 PF02965 Vitamin B12 dependent methionine synthase, activation domain IUA53_14720 PF04204 Homoserine O-succinyltransferase IUA53_14730 PF01584 CheW-like domain IUA53_14740 PF13614 AAA domain IUA53_14745 PF00072 Response regulator receiver domain IUA53_14745 PF01339 CheB methylesterase IUA53_14750 PF01584 CheW-like domain IUA53_14750 PF02895 Signal transducing histidine kinase, homodimeric domain IUA53_14750 PF00072 Response regulator receiver domain IUA53_14750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_14750 PF01627 Hpt domain IUA53_14755 PF04344 Chemotaxis phosphatase, CheZ IUA53_14760 PF00072 Response regulator receiver domain IUA53_14765 PF04545 Sigma-70, region 4 IUA53_14765 PF04539 Sigma-70 region 3 IUA53_14765 PF04542 Sigma-70 region 2 IUA53_14770 PF10609 NUBPL iron-transfer P-loop NTPase IUA53_14775 PF00448 SRP54-type protein, GTPase domain IUA53_14780 PF00771 FHIPEP family IUA53_14785 PF01312 FlhB HrpN YscU SpaS Family IUA53_14790 PF01311 Bacterial export proteins, family 1 IUA53_14795 PF01313 Bacterial export proteins, family 3 IUA53_14800 PF00813 FliP family IUA53_14805 PF04347 Flagellar biosynthesis protein, FliO IUA53_14810 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IUA53_14815 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IUA53_14815 PF02154 Flagellar motor switch protein FliM IUA53_14845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IUA53_14845 PF18269 T3SS EscN ATPase C-terminal domain IUA53_14855 PF14841 FliG middle domain IUA53_14855 PF14842 FliG N-terminal domain IUA53_14855 PF01706 FliG C-terminal domain IUA53_14860 PF01514 Secretory protein of YscJ/FliF family IUA53_14860 PF08345 Flagellar M-ring protein C-terminal IUA53_14865 PF02049 Flagellar hook-basal body complex protein FliE IUA53_14870 PF00072 Response regulator receiver domain IUA53_14870 PF02954 Bacterial regulatory protein, Fis family IUA53_14870 PF00158 Sigma-54 interaction domain IUA53_14875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_14875 PF00512 His Kinase A (phospho-acceptor) domain IUA53_14875 PF13188 PAS domain IUA53_14880 PF00158 Sigma-54 interaction domain IUA53_14880 PF06490 Flagellar regulatory protein FleQ IUA53_14880 PF02954 Bacterial regulatory protein, Fis family IUA53_14885 PF12445 Flagellin protein IUA53_14885 PF00669 Bacterial flagellin N-terminal helical region IUA53_14885 PF00700 Bacterial flagellin C-terminal helical region IUA53_14890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IUA53_14895 PF02911 Formyl transferase, C-terminal domain IUA53_14895 PF00551 Formyl transferase IUA53_14900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IUA53_14900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IUA53_14905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IUA53_14905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IUA53_14905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IUA53_14935 PF00550 Phosphopantetheine attachment site IUA53_14940 PF04991 LicD family IUA53_14945 PF00266 Aminotransferase class-V IUA53_14950 PF00483 Nucleotidyl transferase IUA53_14960 PF17102 Stealth protein CR3, conserved region 3 IUA53_14960 PF11380 Stealth protein CR2, conserved region 2 IUA53_14960 PF17101 Stealth protein CR1, conserved region 1 IUA53_14965 PF02350 UDP-N-acetylglucosamine 2-epimerase IUA53_15025 PF08666 SAF domain IUA53_15025 PF03102 NeuB family IUA53_15030 PF02348 Cytidylyltransferase IUA53_15035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IUA53_15040 PF02719 Polysaccharide biosynthesis protein IUA53_15050 PF02561 Flagellar protein FliS IUA53_15055 PF07195 Flagellar hook-associated protein 2 C-terminus IUA53_15055 PF07196 Flagellin hook IN motif IUA53_15055 PF02465 Flagellar hook-associated protein 2 N-terminus IUA53_15060 PF03646 FlaG protein IUA53_15065 PF00700 Bacterial flagellin C-terminal helical region IUA53_15065 PF00669 Bacterial flagellin N-terminal helical region IUA53_15065 PF07196 Flagellin hook IN motif IUA53_15070 PF00669 Bacterial flagellin N-terminal helical region IUA53_15070 PF07196 Flagellin hook IN motif IUA53_15070 PF00700 Bacterial flagellin C-terminal helical region IUA53_15075 PF07196 Flagellin hook IN motif IUA53_15075 PF00669 Bacterial flagellin N-terminal helical region IUA53_15075 PF00700 Bacterial flagellin C-terminal helical region IUA53_15095 PF10135 Rod binding protein IUA53_15095 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IUA53_15100 PF02119 Flagellar P-ring protein IUA53_15105 PF02107 Flagellar L-ring protein IUA53_15110 PF00460 Flagella basal body rod protein IUA53_15110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IUA53_15115 PF00460 Flagella basal body rod protein IUA53_15115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IUA53_15120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IUA53_15120 PF00460 Flagella basal body rod protein IUA53_15120 PF07559 Flagellar basal body protein FlaE IUA53_15125 PF13861 FlgD Tudor-like domain IUA53_15125 PF03963 Flagellar hook capping protein - N-terminal region IUA53_15125 PF13860 FlgD Ig-like domain IUA53_15130 PF00460 Flagella basal body rod protein IUA53_15130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IUA53_15135 PF00460 Flagella basal body rod protein IUA53_15140 PF01739 CheR methyltransferase, SAM binding domain IUA53_15140 PF03705 CheR methyltransferase, all-alpha domain IUA53_15145 PF01584 CheW-like domain IUA53_15145 PF00072 Response regulator receiver domain IUA53_15180 PF01713 Smr domain IUA53_15190 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IUA53_15190 PF02769 AIR synthase related protein, C-terminal domain IUA53_15190 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IUA53_15195 PF01464 Transglycosylase SLT domain IUA53_15195 PF00497 Bacterial extracellular solute-binding proteins, family 3 IUA53_15200 PF14437 MafB19-like deaminase IUA53_15210 PF02254 TrkA-N domain IUA53_15210 PF00999 Sodium/hydrogen exchanger family IUA53_15210 PF02080 TrkA-C domain IUA53_15215 PF03707 Bacterial signalling protein N terminal repeat IUA53_15215 PF00563 EAL domain IUA53_15215 PF00990 Diguanylate cyclase, GGDEF domain IUA53_15220 PF11734 TilS substrate C-terminal domain IUA53_15220 PF01171 PP-loop family IUA53_15220 PF09179 TilS substrate binding domain IUA53_15225 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IUA53_15230 PF02811 PHP domain IUA53_15230 PF01336 OB-fold nucleic acid binding domain IUA53_15230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IUA53_15230 PF14579 Helix-hairpin-helix motif IUA53_15230 PF07733 Bacterial DNA polymerase III alpha NTPase domain IUA53_15235 PF01351 Ribonuclease HII IUA53_15240 PF02684 Lipid-A-disaccharide synthetase IUA53_15245 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IUA53_15245 PF00132 Bacterial transferase hexapeptide (six repeats) IUA53_15250 PF07977 FabA-like domain IUA53_15255 PF03938 Outer membrane protein (OmpH-like) IUA53_15260 PF07244 Surface antigen variable number repeat IUA53_15260 PF01103 Surface antigen IUA53_15265 PF02163 Peptidase family M50 IUA53_15265 PF17820 PDZ domain IUA53_15270 PF13288 DXP reductoisomerase C-terminal domain IUA53_15270 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IUA53_15270 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IUA53_15280 PF01255 Putative undecaprenyl diphosphate synthase IUA53_15285 PF01765 Ribosome recycling factor IUA53_15290 PF00696 Amino acid kinase family IUA53_15295 PF00889 Elongation factor TS IUA53_15300 PF00318 Ribosomal protein S2 IUA53_15305 PF00557 Metallopeptidase family M24 IUA53_15310 PF01842 ACT domain IUA53_15310 PF01966 HD domain IUA53_15310 PF01909 Nucleotidyltransferase domain IUA53_15310 PF08335 GlnD PII-uridylyltransferase IUA53_15315 PF14602 Hexapeptide repeat of succinyl-transferase IUA53_15315 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal IUA53_15315 PF00132 Bacterial transferase hexapeptide (six repeats) IUA53_15320 PF00258 Flavodoxin IUA53_15325 PF00849 RNA pseudouridylate synthase IUA53_15345 PF07715 TonB-dependent Receptor Plug Domain IUA53_15345 PF00593 TonB dependent receptor IUA53_15370 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system IUA53_15385 PF01695 IstB-like ATP binding protein IUA53_15390 PF00665 Integrase core domain IUA53_15410 PF07348 Syd protein (SUKH-2) IUA53_15415 PF14489 QueF-like protein IUA53_15415 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IUA53_15420 PF00990 Diguanylate cyclase, GGDEF domain IUA53_15425 PF11892 Domain of unknown function (DUF3412) IUA53_15425 PF03641 Possible lysine decarboxylase IUA53_15425 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases IUA53_15440 PF00180 Isocitrate/isopropylmalate dehydrogenase IUA53_15440 PF18324 Hypothetical protein TT1725 IUA53_15445 PF10531 SLBB domain IUA53_15450 PF00483 Nucleotidyl transferase IUA53_15465 PF00953 Glycosyl transferase family 4 IUA53_15475 PF10531 SLBB domain IUA53_15475 PF02563 Polysaccharide biosynthesis/export protein IUA53_15485 PF00005 ABC transporter IUA53_15495 PF00854 POT family IUA53_15505 PF16363 GDP-mannose 4,6 dehydratase IUA53_15510 PF04333 MlaA lipoprotein IUA53_15520 PF03918 Cytochrome C biogenesis protein IUA53_15525 PF08534 Redoxin IUA53_15530 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IUA53_15530 PF01578 Cytochrome C assembly protein IUA53_15535 PF03100 CcmE IUA53_15540 PF04995 Heme exporter protein D (CcmD) IUA53_15545 PF01578 Cytochrome C assembly protein IUA53_15550 PF03379 CcmB protein IUA53_15555 PF00005 ABC transporter IUA53_15570 PF12679 ABC-2 family transporter protein IUA53_15575 PF00005 ABC transporter IUA53_15585 PF00154 recA bacterial DNA recombination protein IUA53_15590 PF02464 Competence-damaged protein IUA53_15595 PF05188 MutS domain II IUA53_15595 PF01624 MutS domain I IUA53_15595 PF00488 MutS domain V IUA53_15595 PF05190 MutS family domain IV IUA53_15595 PF05192 MutS domain III IUA53_15600 PF06418 CTP synthase N-terminus IUA53_15600 PF00117 Glutamine amidotransferase class-I IUA53_15605 PF00113 Enolase, C-terminal TIM barrel domain IUA53_15605 PF03952 Enolase, N-terminal domain IUA53_15620 PF00682 HMGL-like IUA53_15620 PF08502 LeuA allosteric (dimerisation) domain IUA53_15625 PF00180 Isocitrate/isopropylmalate dehydrogenase IUA53_15630 PF00330 Aconitase family (aconitate hydratase) IUA53_15635 PF00694 Aconitase C-terminal domain IUA53_15640 PF01966 HD domain IUA53_15640 PF11871 Domain of unknown function (DUF3391) IUA53_15650 PF13401 AAA domain IUA53_15650 PF01471 Putative peptidoglycan binding domain IUA53_15655 PF12627 Probable RNA and SrmB- binding site of polymerase A IUA53_15655 PF01743 Poly A polymerase head domain IUA53_15660 PF00271 Helicase conserved C-terminal domain IUA53_15660 PF00270 DEAD/DEAH box helicase IUA53_15665 PF01725 Ham1 family IUA53_15670 PF04055 Radical SAM superfamily IUA53_15670 PF06969 HemN C-terminal domain IUA53_15695 PF00072 Response regulator receiver domain IUA53_15700 PF04172 LrgB-like family IUA53_15705 PF03788 LrgA family IUA53_15750 PF09615 CRISPR-associated protein (Cas_Csy3) IUA53_15755 PF09614 CRISPR-associated protein (Cas_Csy2) IUA53_15760 PF09611 CRISPR-associated protein (Cas_Csy1) IUA53_15775 PF12729 Four helix bundle sensory module for signal transduction IUA53_15775 PF00672 HAMP domain IUA53_15775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_15780 PF00672 HAMP domain IUA53_15780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_15785 PF00274 Fructose-bisphosphate aldolase class-I IUA53_15810 PF00528 Binding-protein-dependent transport system inner membrane component IUA53_15815 PF00005 ABC transporter IUA53_15815 PF17912 MalK OB fold domain IUA53_15820 PF17912 MalK OB fold domain IUA53_15820 PF03459 TOBE domain IUA53_15820 PF00005 ABC transporter IUA53_15825 PF02954 Bacterial regulatory protein, Fis family IUA53_15825 PF01590 GAF domain IUA53_15825 PF00158 Sigma-54 interaction domain IUA53_15830 PF00121 Triosephosphate isomerase IUA53_15835 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IUA53_15840 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IUA53_15845 PF01266 FAD dependent oxidoreductase IUA53_15845 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IUA53_15850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IUA53_15850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IUA53_15855 PF08402 TOBE domain IUA53_15855 PF00005 ABC transporter IUA53_15905 PF00924 Mechanosensitive ion channel IUA53_15910 PF01979 Amidohydrolase family IUA53_15925 PF00005 ABC transporter IUA53_15925 PF12848 ABC transporter IUA53_15935 PF01869 BadF/BadG/BcrA/BcrD ATPase family IUA53_15955 PF02798 Glutathione S-transferase, N-terminal domain IUA53_15955 PF00043 Glutathione S-transferase, C-terminal domain IUA53_16020 PF00144 Beta-lactamase IUA53_16030 PF13476 AAA domain IUA53_16035 PF00149 Calcineurin-like phosphoesterase IUA53_16035 PF12320 Type 5 capsule protein repressor C-terminal domain IUA53_16040 PF08447 PAS fold IUA53_16040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_16040 PF13426 PAS domain IUA53_16045 PF01205 Uncharacterized protein family UPF0029 IUA53_16045 PF09186 Domain of unknown function (DUF1949) IUA53_16055 PF02566 OsmC-like protein IUA53_16060 PF01047 MarR family IUA53_16065 PF03006 Haemolysin-III related IUA53_16075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_16075 PF03466 LysR substrate binding domain IUA53_16080 PF00582 Universal stress protein family IUA53_16085 PF01384 Phosphate transporter family IUA53_16090 PF01895 PhoU domain IUA53_16095 PF00005 ABC transporter IUA53_16100 PF00528 Binding-protein-dependent transport system inner membrane component IUA53_16105 PF00528 Binding-protein-dependent transport system inner membrane component IUA53_16115 PF13089 Polyphosphate kinase N-terminal domain IUA53_16115 PF02503 Polyphosphate kinase middle domain IUA53_16115 PF17941 Polyphosphate kinase C-terminal domain 1 IUA53_16115 PF13090 Polyphosphate kinase C-terminal domain 2 IUA53_16120 PF02541 Ppx/GppA phosphatase family IUA53_16125 PF00274 Fructose-bisphosphate aldolase class-I IUA53_16130 PF00162 Phosphoglycerate kinase IUA53_16135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IUA53_16135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IUA53_16140 PF02780 Transketolase, C-terminal domain IUA53_16140 PF00456 Transketolase, thiamine diphosphate binding domain IUA53_16140 PF02779 Transketolase, pyrimidine binding domain IUA53_16145 PF02773 S-adenosylmethionine synthetase, C-terminal domain IUA53_16145 PF00438 S-adenosylmethionine synthetase, N-terminal domain IUA53_16145 PF02772 S-adenosylmethionine synthetase, central domain IUA53_16165 PF00465 Iron-containing alcohol dehydrogenase IUA53_16180 PF00072 Response regulator receiver domain IUA53_16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_16180 PF09308 LuxQ, periplasmic IUA53_16180 PF00512 His Kinase A (phospho-acceptor) domain IUA53_16190 PF00999 Sodium/hydrogen exchanger family IUA53_16190 PF02080 TrkA-C domain IUA53_16190 PF03471 Transporter associated domain IUA53_16195 PF07549 SecD/SecF GG Motif IUA53_16195 PF02355 Protein export membrane protein IUA53_16240 PF01709 Transcriptional regulator IUA53_16245 PF03969 AFG1-like ATPase IUA53_16255 PF00595 PDZ domain IUA53_16255 PF13180 PDZ domain IUA53_16260 PF13180 PDZ domain IUA53_16270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IUA53_16275 PF01722 BolA-like protein IUA53_16285 PF05494 MlaC protein IUA53_16290 PF02470 MlaD protein IUA53_16295 PF02405 Permease MlaE IUA53_16300 PF00005 ABC transporter IUA53_16305 PF01699 Sodium/calcium exchanger protein IUA53_16310 PF00571 CBS domain IUA53_16310 PF01380 SIS domain IUA53_16330 PF12399 Branched-chain amino acid ATP-binding cassette transporter IUA53_16330 PF00005 ABC transporter IUA53_16335 PF04552 Sigma-54, DNA binding domain IUA53_16335 PF00309 Sigma-54 factor, Activator interacting domain (AID) IUA53_16335 PF04963 Sigma-54 factor, core binding domain IUA53_16340 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IUA53_16345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IUA53_16350 PF03668 P-loop ATPase protein family IUA53_16355 PF00381 PTS HPr component phosphorylation site IUA53_16360 PF03448 MgtE intracellular N domain IUA53_16360 PF01769 Divalent cation transporter IUA53_16360 PF00571 CBS domain IUA53_16365 PF00486 Transcriptional regulatory protein, C terminal IUA53_16365 PF00072 Response regulator receiver domain IUA53_16380 PF04386 Stringent starvation protein B IUA53_16385 PF02798 Glutathione S-transferase, N-terminal domain IUA53_16385 PF00043 Glutathione S-transferase, C-terminal domain IUA53_16390 PF02167 Cytochrome C1 family IUA53_16395 PF00033 Cytochrome b/b6/petB IUA53_16395 PF00032 Cytochrome b(C-terminal)/b6/petD IUA53_16400 PF00355 Rieske [2Fe-2S] domain IUA53_16400 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IUA53_16410 PF07715 TonB-dependent Receptor Plug Domain IUA53_16410 PF00593 TonB dependent receptor IUA53_16420 PF08281 Sigma-70, region 4 IUA53_16420 PF04542 Sigma-70 region 2 IUA53_16425 PF00380 Ribosomal protein S9/S16 IUA53_16430 PF00572 Ribosomal protein L13 IUA53_16440 PF03819 MazG nucleotide pyrophosphohydrolase domain IUA53_16445 PF04607 Region found in RelA / SpoT proteins IUA53_16445 PF13291 ACT domain IUA53_16445 PF02824 TGS domain IUA53_16450 PF05958 tRNA (Uracil-5-)-methyltransferase IUA53_16455 PF01648 4'-phosphopantetheinyl transferase superfamily IUA53_16460 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IUA53_16465 PF11967 Recombination protein O N terminal IUA53_16465 PF02565 Recombination protein O C terminal IUA53_16475 PF01368 DHH family IUA53_16475 PF02272 DHHA1 domain IUA53_16475 PF17768 RecJ OB domain IUA53_16480 PF10411 Disulfide bond isomerase protein N-terminus IUA53_16480 PF13098 Thioredoxin-like domain IUA53_16485 PF02899 Phage integrase, N-terminal SAM-like domain IUA53_16485 PF00589 Phage integrase family IUA53_16490 PF05099 Tellurite resistance protein TerB IUA53_16490 PF00226 DnaJ domain IUA53_16500 PF03968 OstA-like protein IUA53_16500 PF04453 LPS transport system D IUA53_16505 PF09312 SurA N-terminal domain IUA53_16505 PF00639 PPIC-type PPIASE domain IUA53_16510 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IUA53_16515 PF00398 Ribosomal RNA adenine dimethylase IUA53_16520 PF04379 ApaG domain IUA53_16525 PF00149 Calcineurin-like phosphoesterase IUA53_16530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_16530 PF00672 HAMP domain IUA53_16535 PF01842 ACT domain IUA53_16535 PF00696 Amino acid kinase family IUA53_16545 PF11791 Aconitate B N-terminal domain IUA53_16545 PF06434 Aconitate hydratase 2 N-terminus IUA53_16545 PF00330 Aconitase family (aconitate hydratase) IUA53_16550 PF14743 DNA ligase OB-like domain IUA53_16550 PF01068 ATP dependent DNA ligase domain IUA53_16560 PF00330 Aconitase family (aconitate hydratase) IUA53_16560 PF06434 Aconitate hydratase 2 N-terminus IUA53_16560 PF11791 Aconitate B N-terminal domain IUA53_16565 PF07995 Glucose / Sorbosone dehydrogenase IUA53_16575 PF13193 AMP-binding enzyme C-terminal domain IUA53_16575 PF00501 AMP-binding enzyme IUA53_16580 PF00512 His Kinase A (phospho-acceptor) domain IUA53_16580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_16580 PF00072 Response regulator receiver domain IUA53_16580 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IUA53_16580 PF00672 HAMP domain IUA53_16580 PF01627 Hpt domain IUA53_16585 PF00072 Response regulator receiver domain IUA53_16590 PF09411 Lipid A 3-O-deacylase (PagL) IUA53_16600 PF03544 Gram-negative bacterial TonB protein C-terminal IUA53_16605 PF02472 Biopolymer transport protein ExbD/TolR IUA53_16610 PF01618 MotA/TolQ/ExbB proton channel family IUA53_16615 PF01618 MotA/TolQ/ExbB proton channel family IUA53_16640 PF12849 PBP superfamily domain IUA53_16645 PF00512 His Kinase A (phospho-acceptor) domain IUA53_16645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_16645 PF11808 Phosphate regulon sensor protein PhoR IUA53_16645 PF00989 PAS fold IUA53_16650 PF00072 Response regulator receiver domain IUA53_16650 PF00486 Transcriptional regulatory protein, C terminal IUA53_16655 PF00497 Bacterial extracellular solute-binding proteins, family 3 IUA53_16655 PF00512 His Kinase A (phospho-acceptor) domain IUA53_16655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_16660 PF04381 Putative exonuclease, RdgC IUA53_16665 PF07883 Cupin domain IUA53_16665 PF01381 Helix-turn-helix IUA53_16670 PF03594 Benzoate membrane transport protein IUA53_16685 PF01230 HIT domain IUA53_16690 PF02673 Bacitracin resistance protein BacA IUA53_16705 PF02660 Glycerol-3-phosphate acyltransferase IUA53_16710 PF00814 Glycoprotease family IUA53_16715 PF01165 Ribosomal protein S21 IUA53_16725 PF08275 DNA primase catalytic core, N-terminal domain IUA53_16725 PF01807 CHC2 zinc finger IUA53_16725 PF10410 DnaB-helicase binding domain of primase IUA53_16725 PF08278 DNA primase DnaG DnaB-binding IUA53_16730 PF04539 Sigma-70 region 3 IUA53_16730 PF04545 Sigma-70, region 4 IUA53_16730 PF04546 Sigma-70, non-essential region IUA53_16730 PF04542 Sigma-70 region 2 IUA53_16730 PF00140 Sigma-70 factor, region 1.2 IUA53_16730 PF03979 Sigma-70 factor, region 1.1 IUA53_16735 PF02743 Cache domain IUA53_16735 PF00672 HAMP domain IUA53_16735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_16760 PF00873 AcrB/AcrD/AcrF family IUA53_16765 PF13533 Biotin-lipoyl like IUA53_16775 PF00596 Class II Aldolase and Adducin N-terminal domain IUA53_16780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IUA53_16780 PF13378 Enolase C-terminal domain-like IUA53_16795 PF02770 Acyl-CoA dehydrogenase, middle domain IUA53_16795 PF12806 Acetyl-CoA dehydrogenase C-terminal like IUA53_16795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IUA53_16795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IUA53_16810 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase IUA53_16810 PF13746 4Fe-4S dicluster domain IUA53_16810 PF12801 4Fe-4S binding domain IUA53_16815 PF01636 Phosphotransferase enzyme family IUA53_16820 PF01323 DSBA-like thioredoxin domain IUA53_16830 PF12804 MobA-like NTP transferase domain IUA53_16840 PF00005 ABC transporter IUA53_16845 PF00528 Binding-protein-dependent transport system inner membrane component IUA53_16850 PF00005 ABC transporter IUA53_16855 PF13426 PAS domain IUA53_16855 PF08447 PAS fold IUA53_16855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_16860 PF00591 Glycosyl transferase family, a/b domain IUA53_16860 PF02885 Glycosyl transferase family, helical bundle domain IUA53_16865 PF14824 Sirohaem biosynthesis protein central IUA53_16865 PF10414 Sirohaem synthase dimerisation region IUA53_16865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IUA53_16870 PF01568 Molydopterin dinucleotide binding domain IUA53_16870 PF04324 BFD-like [2Fe-2S] binding domain IUA53_16870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IUA53_16870 PF00384 Molybdopterin oxidoreductase IUA53_16875 PF13806 Rieske-like [2Fe-2S] domain IUA53_16880 PF04324 BFD-like [2Fe-2S] binding domain IUA53_16880 PF18267 Rubredoxin NAD+ reductase C-terminal domain IUA53_16880 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_16880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IUA53_16880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IUA53_16885 PF01740 STAS domain IUA53_16885 PF00916 Sulfate permease family IUA53_16895 PF08376 Nitrate and nitrite sensing IUA53_16895 PF03861 ANTAR domain IUA53_16905 PF01569 PAP2 superfamily IUA53_16910 PF01722 BolA-like protein IUA53_16920 PF05175 Methyltransferase small domain IUA53_16925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IUA53_16935 PF00593 TonB dependent receptor IUA53_16935 PF07715 TonB-dependent Receptor Plug Domain IUA53_16940 PF00152 tRNA synthetases class II (D, K and N) IUA53_16945 PF08207 Elongation factor P (EF-P) KOW-like domain IUA53_16945 PF01132 Elongation factor P (EF-P) OB domain IUA53_16945 PF09285 Elongation factor P, C-terminal IUA53_16950 PF04055 Radical SAM superfamily IUA53_16970 PF13419 Haloacid dehalogenase-like hydrolase IUA53_16975 PF08446 PAS fold IUA53_16975 PF00512 His Kinase A (phospho-acceptor) domain IUA53_16975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_16975 PF00360 Phytochrome region IUA53_16975 PF01590 GAF domain IUA53_16980 PF03707 Bacterial signalling protein N terminal repeat IUA53_16980 PF00563 EAL domain IUA53_16980 PF00990 Diguanylate cyclase, GGDEF domain IUA53_16985 PF00986 DNA gyrase B subunit, carboxyl terminus IUA53_16985 PF00204 DNA gyrase B IUA53_16985 PF01751 Toprim domain IUA53_16985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_16990 PF05728 Uncharacterised protein family (UPF0227) IUA53_17000 PF06853 Protein of unknown function (DUF1249) IUA53_17005 PF00293 NUDIX domain IUA53_17010 PF02321 Outer membrane efflux protein IUA53_17030 PF00271 Helicase conserved C-terminal domain IUA53_17030 PF00270 DEAD/DEAH box helicase IUA53_17030 PF12343 Cold shock protein DEAD box A IUA53_17030 PF03880 DbpA RNA binding domain IUA53_17035 PF10414 Sirohaem synthase dimerisation region IUA53_17035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IUA53_17045 PF02562 PhoH-like protein IUA53_17045 PF13638 PIN domain IUA53_17055 PF00176 SNF2 family N-terminal domain IUA53_17055 PF18339 RapA N-terminal Tudor like domain 1 IUA53_17055 PF18337 RapA N-terminal Tudor like domain IUA53_17055 PF12137 RNA polymerase recycling family C-terminal IUA53_17055 PF00271 Helicase conserved C-terminal domain IUA53_17060 PF00849 RNA pseudouridylate synthase IUA53_17075 PF07690 Major Facilitator Superfamily IUA53_17080 PF00512 His Kinase A (phospho-acceptor) domain IUA53_17080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_17080 PF00072 Response regulator receiver domain IUA53_17080 PF09456 RcsC Alpha-Beta-Loop (ABL) IUA53_17085 PF05230 MASE2 domain IUA53_17085 PF00990 Diguanylate cyclase, GGDEF domain IUA53_17090 PF00072 Response regulator receiver domain IUA53_17095 PF00303 Thymidylate synthase IUA53_17100 PF01790 Prolipoprotein diacylglyceryl transferase IUA53_17105 PF01925 Sulfite exporter TauE/SafE IUA53_17110 PF01590 GAF domain IUA53_17110 PF02896 PEP-utilising enzyme, TIM barrel domain IUA53_17110 PF00391 PEP-utilising enzyme, mobile domain IUA53_17110 PF05524 PEP-utilising enzyme, N-terminal IUA53_17115 PF00293 NUDIX domain IUA53_17120 PF02976 DNA mismatch repair enzyme MutH IUA53_17130 PF01928 CYTH domain IUA53_17140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_17140 PF00512 His Kinase A (phospho-acceptor) domain IUA53_17145 PF00486 Transcriptional regulatory protein, C terminal IUA53_17145 PF00072 Response regulator receiver domain IUA53_17150 PF00873 AcrB/AcrD/AcrF family IUA53_17160 PF02321 Outer membrane efflux protein IUA53_17165 PF00171 Aldehyde dehydrogenase family IUA53_17165 PF01619 Proline dehydrogenase IUA53_17165 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IUA53_17165 PF14850 DNA-binding domain of Proline dehydrogenase IUA53_17170 PF17200 Single Cache domain 2 IUA53_17170 PF00672 HAMP domain IUA53_17170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_17180 PF04977 Septum formation initiator IUA53_17185 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IUA53_17190 PF02542 YgbB family IUA53_17195 PF01142 tRNA pseudouridine synthase D (TruD) IUA53_17200 PF01975 Survival protein SurE IUA53_17210 PF09335 SNARE associated Golgi protein IUA53_17215 PF01551 Peptidase family M23 IUA53_17215 PF01476 LysM domain IUA53_17220 PF00140 Sigma-70 factor, region 1.2 IUA53_17220 PF04542 Sigma-70 region 2 IUA53_17220 PF04539 Sigma-70 region 3 IUA53_17220 PF04545 Sigma-70, region 4 IUA53_17225 PF00186 Dihydrofolate reductase IUA53_17245 PF09055 Nickel-containing superoxide dismutase IUA53_17255 PF01926 50S ribosome-binding GTPase IUA53_17255 PF01018 GTP1/OBG IUA53_17260 PF01016 Ribosomal L27 protein IUA53_17265 PF00829 Ribosomal prokaryotic L21 protein IUA53_17270 PF00348 Polyprenyl synthetase IUA53_17280 PF00557 Metallopeptidase family M24 IUA53_17285 PF14718 Soluble lytic murein transglycosylase L domain IUA53_17285 PF01464 Transglycosylase SLT domain IUA53_17290 PF00378 Enoyl-CoA hydratase/isomerase IUA53_17290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IUA53_17290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IUA53_17295 PF02803 Thiolase, C-terminal domain IUA53_17295 PF00108 Thiolase, N-terminal domain IUA53_17300 PF00589 Phage integrase family IUA53_17300 PF13495 Phage integrase, N-terminal SAM-like domain IUA53_17385 PF01979 Amidohydrolase family IUA53_17395 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH IUA53_17425 PF03352 Methyladenine glycosylase IUA53_17425 PF13302 Acetyltransferase (GNAT) domain IUA53_17425 PF13673 Acetyltransferase (GNAT) domain IUA53_17425 PF00117 Glutamine amidotransferase class-I IUA53_17425 PF00958 GMP synthase C terminal domain IUA53_17525 PF01168 Alanine racemase, N-terminal domain IUA53_17525 PF00842 Alanine racemase, C-terminal domain IUA53_17530 PF01380 SIS domain IUA53_17535 PF07075 Protein of unknown function (DUF1343) IUA53_17545 PF00933 Glycosyl hydrolase family 3 N terminal domain IUA53_17550 PF03553 Na+/H+ antiporter family IUA53_17560 PF00171 Aldehyde dehydrogenase family IUA53_17565 PF00709 Adenylosuccinate synthetase IUA53_17570 PF00085 Thioredoxin IUA53_17580 PF00326 Prolyl oligopeptidase family IUA53_17580 PF07676 WD40-like Beta Propeller Repeat IUA53_17585 PF07995 Glucose / Sorbosone dehydrogenase IUA53_17590 PF00210 Ferritin-like domain IUA53_17605 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IUA53_17605 PF02222 ATP-grasp domain IUA53_17610 PF00731 AIR carboxylase IUA53_17615 PF06965 Na+/H+ antiporter 1 IUA53_17620 PF09308 LuxQ, periplasmic IUA53_17620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_17620 PF00512 His Kinase A (phospho-acceptor) domain IUA53_17620 PF00072 Response regulator receiver domain IUA53_17625 PF01546 Peptidase family M20/M25/M40 IUA53_17625 PF07687 Peptidase dimerisation domain IUA53_17630 PF07497 Rho termination factor, RNA-binding domain IUA53_17630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IUA53_17630 PF07498 Rho termination factor, N-terminal domain IUA53_17635 PF00085 Thioredoxin IUA53_17640 PF00271 Helicase conserved C-terminal domain IUA53_17640 PF00270 DEAD/DEAH box helicase IUA53_17645 PF02541 Ppx/GppA phosphatase family IUA53_17650 PF00490 Delta-aminolevulinic acid dehydratase IUA53_17655 PF00990 Diguanylate cyclase, GGDEF domain IUA53_17655 PF07694 5TMR of 5TMR-LYT IUA53_17660 PF01026 TatD related DNase IUA53_17670 PF00902 Sec-independent protein translocase protein (TatC) IUA53_17675 PF02416 mttA/Hcf106 family IUA53_17680 PF02416 mttA/Hcf106 family IUA53_17690 PF10369 Small subunit of acetolactate synthase IUA53_17695 PF00205 Thiamine pyrophosphate enzyme, central domain IUA53_17695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IUA53_17695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IUA53_17710 PF07715 TonB-dependent Receptor Plug Domain IUA53_17710 PF00593 TonB dependent receptor IUA53_17725 PF00929 Exonuclease IUA53_17730 PF03193 RsgA GTPase IUA53_17735 PF02666 Phosphatidylserine decarboxylase IUA53_17745 PF03009 Glycerophosphoryl diester phosphodiesterase family IUA53_17755 PF04748 Divergent polysaccharide deacetylase IUA53_17765 PF01551 Peptidase family M23 IUA53_17770 PF00581 Rhodanese-like domain IUA53_17775 PF00462 Glutaredoxin IUA53_17780 PF02556 Preprotein translocase subunit SecB IUA53_17785 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IUA53_17785 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IUA53_17795 PF00588 SpoU rRNA Methylase family IUA53_17800 PF12146 Serine aminopeptidase, S33 IUA53_17805 PF00672 HAMP domain IUA53_17805 PF16527 Two-component sensor protein CpxA, periplasmic domain IUA53_17805 PF00512 His Kinase A (phospho-acceptor) domain IUA53_17805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_17810 PF00072 Response regulator receiver domain IUA53_17810 PF00486 Transcriptional regulatory protein, C terminal IUA53_17825 PF02107 Flagellar L-ring protein IUA53_17835 PF02142 MGS-like domain IUA53_17840 PF01118 Semialdehyde dehydrogenase, NAD binding domain IUA53_17840 PF02774 Semialdehyde dehydrogenase, dimerisation domain IUA53_17845 PF00696 Amino acid kinase family IUA53_17850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IUA53_17850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IUA53_17855 PF00764 Arginosuccinate synthase IUA53_17860 PF00206 Lyase IUA53_17860 PF14698 Argininosuccinate lyase C-terminal IUA53_17865 PF00696 Amino acid kinase family IUA53_17865 PF00583 Acetyltransferase (GNAT) family IUA53_17870 PF03707 Bacterial signalling protein N terminal repeat IUA53_17870 PF00990 Diguanylate cyclase, GGDEF domain IUA53_17870 PF00563 EAL domain IUA53_17890 PF00199 Catalase IUA53_17890 PF06628 Catalase-related immune-responsive IUA53_17895 PF02798 Glutathione S-transferase, N-terminal domain IUA53_17900 PF00390 Malic enzyme, N-terminal domain IUA53_17900 PF03949 Malic enzyme, NAD binding domain IUA53_17905 PF00912 Transglycosylase IUA53_17905 PF17092 Penicillin-binding protein OB-like domain IUA53_17905 PF00905 Penicillin binding protein transpeptidase domain IUA53_17910 PF11104 Type IV pilus assembly protein PilM; IUA53_17915 PF05137 Fimbrial assembly protein (PilN) IUA53_17930 PF00263 Bacterial type II and III secretion system protein IUA53_17930 PF11741 AMIN domain IUA53_17930 PF03958 Bacterial type II/III secretion system short domain IUA53_17930 PF07660 Secretin and TonB N terminus short domain IUA53_17935 PF01202 Shikimate kinase IUA53_17940 PF01761 3-dehydroquinate synthase IUA53_17950 PF02086 D12 class N6 adenine-specific DNA methyltransferase IUA53_17970 PF00834 Ribulose-phosphate 3 epimerase family IUA53_17975 PF00579 tRNA synthetases class I (W and Y) IUA53_17980 PF00117 Glutamine amidotransferase class-I IUA53_17990 PF00202 Aminotransferase class-III IUA53_17995 PF04958 Arginine N-succinyltransferase beta subunit IUA53_18000 PF00171 Aldehyde dehydrogenase family IUA53_18010 PF00563 EAL domain IUA53_18010 PF03707 Bacterial signalling protein N terminal repeat IUA53_18010 PF13188 PAS domain IUA53_18010 PF00990 Diguanylate cyclase, GGDEF domain IUA53_18020 PF03989 DNA gyrase C-terminal domain, beta-propeller IUA53_18020 PF00521 DNA gyrase/topoisomerase IV, subunit A IUA53_18025 PF00672 HAMP domain IUA53_18025 PF00512 His Kinase A (phospho-acceptor) domain IUA53_18025 PF01627 Hpt domain IUA53_18025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_18025 PF00072 Response regulator receiver domain IUA53_18025 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IUA53_18035 PF00873 AcrB/AcrD/AcrF family IUA53_18050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IUA53_18050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IUA53_18055 PF00202 Aminotransferase class-III IUA53_18060 PF04261 Dyp-type peroxidase family IUA53_18070 PF00909 Ammonium Transporter Family IUA53_18075 PF00543 Nitrogen regulatory protein P-II IUA53_18090 PF12833 Helix-turn-helix domain IUA53_18095 PF05661 Protein of unknown function (DUF808) IUA53_18105 PF00912 Transglycosylase IUA53_18105 PF00905 Penicillin binding protein transpeptidase domain IUA53_18105 PF14814 Bifunctional transglycosylase second domain IUA53_18115 PF13406 Transglycosylase SLT domain IUA53_18120 PF04408 Helicase associated domain (HA2) IUA53_18120 PF00271 Helicase conserved C-terminal domain IUA53_18120 PF08482 ATP-dependent helicase C-terminal IUA53_18120 PF00270 DEAD/DEAH box helicase IUA53_18135 PF01842 ACT domain IUA53_18135 PF00551 Formyl transferase IUA53_18150 PF01432 Peptidase family M3 IUA53_18155 PF02743 Cache domain IUA53_18155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_18155 PF00672 HAMP domain IUA53_18165 PF03471 Transporter associated domain IUA53_18165 PF00999 Sodium/hydrogen exchanger family IUA53_18165 PF02080 TrkA-C domain IUA53_18170 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IUA53_18175 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IUA53_18180 PF00534 Glycosyl transferases group 1 IUA53_18180 PF13439 Glycosyltransferase Family 4 IUA53_18185 PF00366 Ribosomal protein S17 IUA53_18190 PF00831 Ribosomal L29 protein IUA53_18195 PF00252 Ribosomal protein L16p/L10e IUA53_18200 PF00189 Ribosomal protein S3, C-terminal domain IUA53_18200 PF07650 KH domain IUA53_18205 PF00237 Ribosomal protein L22p/L17e IUA53_18210 PF00203 Ribosomal protein S19 IUA53_18215 PF03947 Ribosomal Proteins L2, C-terminal domain IUA53_18215 PF00181 Ribosomal Proteins L2, RNA binding domain IUA53_18220 PF00276 Ribosomal protein L23 IUA53_18225 PF00573 Ribosomal protein L4/L1 family IUA53_18230 PF00297 Ribosomal protein L3 IUA53_18235 PF00338 Ribosomal protein S10p/S20e IUA53_18240 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IUA53_18240 PF00437 Type II/IV secretion system protein IUA53_18245 PF00694 Aconitase C-terminal domain IUA53_18245 PF00330 Aconitase family (aconitate hydratase) IUA53_18250 PF00300 Histidine phosphatase superfamily (branch 1) IUA53_18285 PF07690 Major Facilitator Superfamily IUA53_18295 PF01227 GTP cyclohydrolase I IUA53_18305 PF04371 Porphyromonas-type peptidyl-arginine deiminase IUA53_18310 PF00795 Carbon-nitrogen hydrolase IUA53_18320 PF17158 Membrane-associated sensor, integral membrane domain IUA53_18320 PF00990 Diguanylate cyclase, GGDEF domain IUA53_18330 PF12833 Helix-turn-helix domain IUA53_18330 PF06719 AraC-type transcriptional regulator N-terminus IUA53_18335 PF12146 Serine aminopeptidase, S33 IUA53_18385 PF08494 DEAD/H associated IUA53_18385 PF00271 Helicase conserved C-terminal domain IUA53_18385 PF00270 DEAD/DEAH box helicase IUA53_18395 PF04675 DNA ligase N terminus IUA53_18395 PF01068 ATP dependent DNA ligase domain IUA53_18395 PF04679 ATP dependent DNA ligase C terminal region IUA53_18400 PF00294 pfkB family carbohydrate kinase IUA53_18405 PF00480 ROK family IUA53_18410 PF00326 Prolyl oligopeptidase family IUA53_18415 PF02798 Glutathione S-transferase, N-terminal domain IUA53_18415 PF00043 Glutathione S-transferase, C-terminal domain IUA53_18435 PF00171 Aldehyde dehydrogenase family IUA53_18440 PF00205 Thiamine pyrophosphate enzyme, central domain IUA53_18440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IUA53_18440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IUA53_18450 PF00762 Ferrochelatase IUA53_18455 PF00145 C-5 cytosine-specific DNA methylase IUA53_18465 PF03806 AbgT putative transporter family IUA53_18470 PF01145 SPFH domain / Band 7 family IUA53_18475 PF01145 SPFH domain / Band 7 family IUA53_18475 PF12221 Bacterial membrane protein N terminal IUA53_18480 PF13167 GTP-binding GTPase N-terminal IUA53_18480 PF01926 50S ribosome-binding GTPase IUA53_18480 PF16360 GTP-binding GTPase Middle Region IUA53_18485 PF17209 Hfq protein IUA53_18495 PF01119 DNA mismatch repair protein, C-terminal domain IUA53_18495 PF08676 MutL C terminal dimerisation domain IUA53_18500 PF01520 N-acetylmuramoyl-L-alanine amidase IUA53_18505 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IUA53_18510 PF01256 Carbohydrate kinase IUA53_18510 PF03853 YjeF-related protein N-terminus IUA53_18515 PF08331 Domain of unknown function (DUF1730) IUA53_18525 PF01208 Uroporphyrinogen decarboxylase (URO-D) IUA53_18530 PF00293 NUDIX domain IUA53_18530 PF09297 NADH pyrophosphatase zinc ribbon domain IUA53_18535 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ IUA53_18540 PF01475 Ferric uptake regulator family IUA53_18550 PF01894 Uncharacterised protein family UPF0047 IUA53_18555 PF00691 OmpA family IUA53_18555 PF05736 OprF membrane domain IUA53_18560 PF00772 DnaB-like helicase N terminal domain IUA53_18560 PF03796 DnaB-like helicase C terminal domain IUA53_18585 PF03475 3-alpha domain IUA53_18585 PF03473 MOSC domain IUA53_18590 PF03948 Ribosomal protein L9, C-terminal domain IUA53_18590 PF01281 Ribosomal protein L9, N-terminal domain IUA53_18595 PF01084 Ribosomal protein S18 IUA53_18600 PF01250 Ribosomal protein S6 IUA53_18615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_18615 PF08447 PAS fold IUA53_18620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_18620 PF00512 His Kinase A (phospho-acceptor) domain IUA53_18625 PF00672 HAMP domain IUA53_18625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IUA53_18625 PF17200 Single Cache domain 2 IUA53_18630 PF00356 Bacterial regulatory proteins, lacI family IUA53_18640 PF00232 Glycosyl hydrolase family 1 IUA53_18645 PF00722 Glycosyl hydrolases family 16 IUA53_18655 PF00376 MerR family regulatory protein IUA53_18655 PF09278 MerR, DNA binding IUA53_18660 PF03358 NADPH-dependent FMN reductase IUA53_18670 PF00005 ABC transporter IUA53_18675 PF01032 FecCD transport family IUA53_18680 PF01497 Periplasmic binding protein IUA53_18690 PF00593 TonB dependent receptor IUA53_18690 PF07715 TonB-dependent Receptor Plug Domain IUA53_18695 PF01915 Glycosyl hydrolase family 3 C-terminal domain IUA53_18695 PF00933 Glycosyl hydrolase family 3 N terminal domain IUA53_18695 PF14310 Fibronectin type III-like domain IUA53_18700 PF07690 Major Facilitator Superfamily IUA53_18705 PF01545 Cation efflux family IUA53_18705 PF16916 Dimerisation domain of Zinc Transporter IUA53_18710 PF17151 Periplasmic sensor domain IUA53_18710 PF00990 Diguanylate cyclase, GGDEF domain IUA53_18715 PF00005 ABC transporter IUA53_18715 PF00664 ABC transporter transmembrane region IUA53_18720 PF00664 ABC transporter transmembrane region IUA53_18720 PF00005 ABC transporter IUA53_18725 PF08173 Membrane bound YbgT-like protein IUA53_18730 PF02322 Cytochrome bd terminal oxidase subunit II IUA53_18735 PF01654 Cytochrome bd terminal oxidase subunit I IUA53_18745 PF02954 Bacterial regulatory protein, Fis family IUA53_18745 PF00072 Response regulator receiver domain IUA53_18745 PF00158 Sigma-54 interaction domain IUA53_18790 PF00005 ABC transporter IUA53_18830 PF07690 Major Facilitator Superfamily IUA53_18840 PF05532 CsbD-like IUA53_18845 PF00196 Bacterial regulatory proteins, luxR family IUA53_18850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_18850 PF03466 LysR substrate binding domain IUA53_18855 PF07715 TonB-dependent Receptor Plug Domain IUA53_18855 PF00593 TonB dependent receptor IUA53_18860 PF13181 Tetratricopeptide repeat IUA53_18870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IUA53_18870 PF00205 Thiamine pyrophosphate enzyme, central domain IUA53_18870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IUA53_18875 PF07670 Nucleoside recognition IUA53_18880 PF00355 Rieske [2Fe-2S] domain IUA53_18880 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IUA53_18885 PF00171 Aldehyde dehydrogenase family IUA53_18890 PF00202 Aminotransferase class-III IUA53_18895 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_18895 PF14759 Reductase C-terminal IUA53_18900 PF00111 2Fe-2S iron-sulfur cluster binding domain IUA53_18905 PF00155 Aminotransferase class I and II IUA53_18910 PF00171 Aldehyde dehydrogenase family IUA53_18915 PF01546 Peptidase family M20/M25/M40 IUA53_18915 PF07687 Peptidase dimerisation domain IUA53_18925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_18925 PF03466 LysR substrate binding domain IUA53_18940 PF08281 Sigma-70, region 4 IUA53_18940 PF04542 Sigma-70 region 2 IUA53_18965 PF00472 RF-1 domain IUA53_18970 PF08386 TAP-like protein IUA53_18970 PF00561 alpha/beta hydrolase fold IUA53_18990 PF07992 Pyridine nucleotide-disulphide oxidoreductase IUA53_18995 PF07715 TonB-dependent Receptor Plug Domain IUA53_18995 PF00593 TonB dependent receptor IUA53_19005 PF01048 Phosphorylase superfamily IUA53_19010 PF03466 LysR substrate binding domain IUA53_19010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_19015 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IUA53_19020 PF00107 Zinc-binding dehydrogenase IUA53_19020 PF16884 N-terminal domain of oxidoreductase IUA53_19025 PF00072 Response regulator receiver domain IUA53_19025 PF00990 Diguanylate cyclase, GGDEF domain IUA53_19030 PF00072 Response regulator receiver domain IUA53_19030 PF09308 LuxQ, periplasmic IUA53_19030 PF00512 His Kinase A (phospho-acceptor) domain IUA53_19030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_19040 PF00296 Luciferase-like monooxygenase IUA53_19050 PF01063 Amino-transferase class IV IUA53_19055 PF00593 TonB dependent receptor IUA53_19055 PF07715 TonB-dependent Receptor Plug Domain IUA53_19060 PF00474 Sodium:solute symporter family IUA53_19080 PF00248 Aldo/keto reductase family IUA53_19085 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IUA53_19090 PF03601 Conserved hypothetical protein 698 IUA53_19110 PF03466 LysR substrate binding domain IUA53_19110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_19120 PF01380 SIS domain IUA53_19125 PF08220 DeoR-like helix-turn-helix domain IUA53_19125 PF00455 DeoR C terminal sensor domain IUA53_19130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IUA53_19130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IUA53_19135 PF00132 Bacterial transferase hexapeptide (six repeats) IUA53_19135 PF14602 Hexapeptide repeat of succinyl-transferase IUA53_19135 PF12804 MobA-like NTP transferase domain IUA53_19145 PF00892 EamA-like transporter family IUA53_19150 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IUA53_19150 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IUA53_19155 PF12833 Helix-turn-helix domain IUA53_19160 PF00144 Beta-lactamase IUA53_19165 PF17944 Arginine decarboxylase C-terminal helical extension IUA53_19165 PF17810 Arginine decarboxylase helical bundle domain IUA53_19165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IUA53_19175 PF02233 NAD(P) transhydrogenase beta subunit IUA53_19180 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IUA53_19185 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IUA53_19185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IUA53_19205 PF00544 Pectate lyase IUA53_19220 PF03422 Carbohydrate binding module (family 6) IUA53_19220 PF04616 Glycosyl hydrolases family 43 IUA53_19230 PF01040 UbiA prenyltransferase family IUA53_19235 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IUA53_19240 PF00510 Cytochrome c oxidase subunit III IUA53_19245 PF00115 Cytochrome C and Quinol oxidase polypeptide I IUA53_19250 PF06481 COX Aromatic Rich Motif IUA53_19250 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IUA53_19260 PF00848 Ring hydroxylating alpha subunit (catalytic domain) IUA53_19260 PF00355 Rieske [2Fe-2S] domain IUA53_19265 PF00111 2Fe-2S iron-sulfur cluster binding domain IUA53_19265 PF00175 Oxidoreductase NAD-binding domain IUA53_19285 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IUA53_19290 PF07687 Peptidase dimerisation domain IUA53_19290 PF01546 Peptidase family M20/M25/M40 IUA53_19295 PF00857 Isochorismatase family IUA53_19300 PF00296 Luciferase-like monooxygenase IUA53_19310 PF03069 Acetamidase/Formamidase family IUA53_19315 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IUA53_19325 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IUA53_19335 PF00118 TCP-1/cpn60 chaperonin family IUA53_19340 PF00166 Chaperonin 10 Kd subunit IUA53_19350 PF03091 CutA1 divalent ion tolerance protein IUA53_19355 PF02683 Cytochrome C biogenesis protein transmembrane region IUA53_19355 PF11412 Disulphide bond corrector protein DsbC IUA53_19360 PF01220 Dehydroquinase class II IUA53_19365 PF00364 Biotin-requiring enzyme IUA53_19370 PF02785 Biotin carboxylase C-terminal domain IUA53_19370 PF00289 Biotin carboxylase, N-terminal domain IUA53_19370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IUA53_19405 PF01355 High potential iron-sulfur protein IUA53_19410 PF13006 Insertion element 4 transposase N-terminal IUA53_19410 PF01609 Transposase DDE domain IUA53_19415 PF01425 Amidase IUA53_19430 PF01207 Dihydrouridine synthase (Dus) IUA53_19435 PF02954 Bacterial regulatory protein, Fis family IUA53_19440 PF01808 AICARFT/IMPCHase bienzyme IUA53_19440 PF02142 MGS-like domain IUA53_19450 PF02844 Phosphoribosylglycinamide synthetase, N domain IUA53_19450 PF02843 Phosphoribosylglycinamide synthetase, C domain IUA53_19450 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IUA53_19455 PF00331 Glycosyl hydrolase family 10 IUA53_19455 PF02018 Carbohydrate binding domain IUA53_19455 PF06452 Carbohydrate family 9 binding domain-like IUA53_19455 PF00395 S-layer homology domain IUA53_19460 PF00027 Cyclic nucleotide-binding domain IUA53_19460 PF00520 Ion transport protein IUA53_19470 PF00485 Phosphoribulokinase / Uridine kinase family IUA53_19480 PF00486 Transcriptional regulatory protein, C terminal IUA53_19480 PF00072 Response regulator receiver domain IUA53_19485 PF00512 His Kinase A (phospho-acceptor) domain IUA53_19485 PF00672 HAMP domain IUA53_19485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IUA53_19495 PF01293 Phosphoenolpyruvate carboxykinase IUA53_19500 PF01430 Hsp33 protein IUA53_19505 PF01479 S4 domain IUA53_19510 PF11356 Type II secretion system protein C IUA53_19515 PF00263 Bacterial type II and III secretion system protein IUA53_19515 PF03958 Bacterial type II/III secretion system short domain IUA53_19520 PF00437 Type II/IV secretion system protein IUA53_19525 PF00482 Type II secretion system (T2SS), protein F IUA53_19530 PF07963 Prokaryotic N-terminal methylation motif IUA53_19530 PF08334 Type II secretion system (T2SS), protein G IUA53_19535 PF07963 Prokaryotic N-terminal methylation motif IUA53_19535 PF12019 Type II transport protein GspH IUA53_19540 PF07963 Prokaryotic N-terminal methylation motif IUA53_19540 PF02501 Type II secretion system (T2SS), protein I IUA53_19545 PF11612 Type II secretion system (T2SS), protein J IUA53_19545 PF07963 Prokaryotic N-terminal methylation motif IUA53_19550 PF03934 Type II secretion system (T2SS), protein K IUA53_19555 PF05134 Type II secretion system (T2SS), protein L IUA53_19555 PF12693 GspL periplasmic domain IUA53_19560 PF04612 Type II secretion system (T2SS), protein M IUA53_19575 PF00171 Aldehyde dehydrogenase family IUA53_19580 PF01931 Protein of unknown function DUF84 IUA53_19585 PF13419 Haloacid dehalogenase-like hydrolase IUA53_19590 PF00293 NUDIX domain IUA53_19595 PF00459 Inositol monophosphatase family IUA53_19605 PF00535 Glycosyl transferase family 2 IUA53_19610 PF04349 Periplasmic glucan biosynthesis protein, MdoG IUA53_19620 PF06794 Uncharacterised protein family (UPF0270) IUA53_19625 PF00561 alpha/beta hydrolase fold IUA53_19635 PF12848 ABC transporter IUA53_19635 PF00005 ABC transporter IUA53_19650 PF04102 SlyX IUA53_19660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IUA53_19660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IUA53_19670 PF01272 Transcription elongation factor, GreA/GreB, C-term IUA53_19670 PF03449 Transcription elongation factor, N-terminal IUA53_19675 PF09371 Tex-like protein N-terminal domain IUA53_19675 PF17674 HHH domain IUA53_19675 PF16921 Tex protein YqgF-like domain IUA53_19675 PF00575 S1 RNA binding domain IUA53_19690 PF00561 alpha/beta hydrolase fold IUA53_19695 PF00156 Phosphoribosyl transferase domain IUA53_19705 PF01521 Iron-sulphur cluster biosynthesis IUA53_19705 PF01106 NifU-like domain IUA53_19710 PF01177 Asp/Glu/Hydantoin racemase IUA53_19715 PF13649 Methyltransferase domain IUA53_19725 PF01554 MatE IUA53_19740 PF02630 SCO1/SenC IUA53_19745 PF01040 UbiA prenyltransferase family IUA53_19750 PF02628 Cytochrome oxidase assembly protein IUA53_19770 PF00510 Cytochrome c oxidase subunit III IUA53_19780 PF00115 Cytochrome C and Quinol oxidase polypeptide I IUA53_19785 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IUA53_19785 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IUA53_19790 PF00717 Peptidase S24-like IUA53_19790 PF01726 LexA DNA binding domain IUA53_19795 PF07715 TonB-dependent Receptor Plug Domain IUA53_19795 PF00593 TonB dependent receptor IUA53_19805 PF01553 Acyltransferase IUA53_19810 PF00585 C-terminal regulatory domain of Threonine dehydratase IUA53_19810 PF00291 Pyridoxal-phosphate dependent enzyme IUA53_19815 PF00920 Dehydratase family IUA53_19820 PF03458 UPF0126 domain IUA53_19825 PF01078 Magnesium chelatase, subunit ChlI IUA53_19825 PF13335 Magnesium chelatase, subunit ChlI C-terminal IUA53_19830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IUA53_19830 PF03466 LysR substrate binding domain IUA53_19835 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IUA53_19835 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IUA53_19840 PF07690 Major Facilitator Superfamily IUA53_19845 PF01103 Surface antigen IUA53_19845 PF17243 POTRA domain TamA domain 1 IUA53_19845 PF07244 Surface antigen variable number repeat IUA53_19850 PF04357 TamB, inner membrane protein subunit of TAM complex IUA53_19870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IUA53_19870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IUA53_19880 PF01472 PUA domain IUA53_19880 PF00696 Amino acid kinase family IUA53_19900 PF03109 ABC1 family IUA53_19920 PF01979 Amidohydrolase family IUA53_19945 PF01206 Sulfurtransferase TusA IUA53_19950 PF00156 Phosphoribosyl transferase domain IUA53_19955 PF03725 3' exoribonuclease family, domain 2 IUA53_19955 PF01138 3' exoribonuclease family, domain 1 IUA53_19960 PF03755 YicC-like family, N-terminal region IUA53_19960 PF08340 Domain of unknown function (DUF1732) IUA53_19970 PF02810 SEC-C motif IUA53_19995 PF07804 HipA-like C-terminal domain IUA53_19995 PF13657 HipA N-terminal domain IUA53_20005 PF01695 IstB-like ATP binding protein IUA53_20010 PF00665 Integrase core domain IUA53_20035 PF04820 Tryptophan halogenase IUA53_20040 PF04820 Tryptophan halogenase IUA53_20050 PF00232 Glycosyl hydrolase family 1 IUA53_20060 PF00356 Bacterial regulatory proteins, lacI family IUA53_20070 PF00691 OmpA family IUA53_20075 PF01966 HD domain IUA53_20075 PF11871 Domain of unknown function (DUF3391) IUA53_20090 PF02798 Glutathione S-transferase, N-terminal domain IUA53_20090 PF00043 Glutathione S-transferase, C-terminal domain IUA53_20105 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IUA53_20105 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IUA53_20110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IUA53_20110 PF02874 ATP synthase alpha/beta family, beta-barrel domain IUA53_20115 PF00231 ATP synthase IUA53_20120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IUA53_20120 PF02874 ATP synthase alpha/beta family, beta-barrel domain IUA53_20120 PF00306 ATP synthase alpha/beta chain, C terminal domain IUA53_20125 PF00213 ATP synthase delta (OSCP) subunit IUA53_20130 PF00430 ATP synthase B/B' CF(0) IUA53_20135 PF00137 ATP synthase subunit C IUA53_20140 PF00119 ATP synthase A chain IUA53_20150 PF17762 HTH domain found in ParB protein IUA53_20150 PF02195 ParB-like nuclease domain IUA53_20155 PF13614 AAA domain IUA53_20160 PF02527 rRNA small subunit methyltransferase G IUA53_20165 PF01134 Glucose inhibited division protein A IUA53_20165 PF13932 GidA associated domain IUA53_20180 PF00258 Flavodoxin IUA53_20185 PF10396 GTP-binding protein TrmE N-terminus IUA53_20185 PF12631 MnmE helical domain IUA53_20185 PF01926 50S ribosome-binding GTPase IUA53_20190 PF04461 Protein of unknown function (DUF520) IUA53_20195 PF14849 YidC periplasmic domain IUA53_20195 PF02096 60Kd inner membrane protein IUA53_20200 PF01809 Putative membrane protein insertion efficiency factor IUA53_20205 PF00825 Ribonuclease P IUA53_20210 PF00468 Ribosomal protein L34