locus-tag class description KUC3_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KUC3_00010 PF02767 DNA polymerase III beta subunit, central domain KUC3_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KUC3_00020 PF02463 RecF/RecN/SMC N terminal domain KUC3_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_00030 PF01751 Toprim domain KUC3_00030 PF00204 DNA gyrase B KUC3_00030 PF18053 DNA gyrase B subunit insert domain KUC3_00030 PF00986 DNA gyrase B subunit, carboxyl terminus KUC3_00070 PF02092 Glycyl-tRNA synthetase beta subunit KUC3_00070 PF05746 DALR anticodon binding domain KUC3_00080 PF02091 Glycyl-tRNA synthetase alpha subunit KUC3_00090 PF03352 Methyladenine glycosylase KUC3_00110 PF04220 Der GTPase activator (YihI) KUC3_00130 PF00034 Cytochrome c KUC3_00140 PF01926 50S ribosome-binding GTPase KUC3_00150 PF01612 3'-5' exonuclease KUC3_00150 PF00476 DNA polymerase family A KUC3_00150 PF01367 5'-3' exonuclease, C-terminal SAM fold KUC3_00150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KUC3_00170 PF02386 Cation transport protein KUC3_00180 PF02254 TrkA-N domain KUC3_00180 PF02080 TrkA-C domain KUC3_00190 PF01189 16S rRNA methyltransferase RsmB/F KUC3_00190 PF01029 NusB family KUC3_00200 PF00551 Formyl transferase KUC3_00200 PF02911 Formyl transferase, C-terminal domain KUC3_00210 PF01327 Polypeptide deformylase KUC3_00230 PF02481 DNA recombination-mediator protein A KUC3_00230 PF17782 DprA winged helix domain KUC3_00240 PF04361 Protein of unknown function (DUF494) KUC3_00260 PF01300 Telomere recombination KUC3_00270 PF01218 Coproporphyrinogen III oxidase KUC3_00280 PF03922 OmpW family KUC3_00300 PF08501 Shikimate dehydrogenase substrate binding domain KUC3_00300 PF01488 Shikimate / quinate 5-dehydrogenase KUC3_00300 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KUC3_00310 PF00132 Bacterial transferase hexapeptide (six repeats) KUC3_00350 PF02811 PHP domain KUC3_00350 PF01336 OB-fold nucleic acid binding domain KUC3_00350 PF14579 Helix-hairpin-helix motif KUC3_00350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KUC3_00350 PF07733 Bacterial DNA polymerase III alpha NTPase domain KUC3_00410 PF02225 PA domain KUC3_00410 PF04389 Peptidase family M28 KUC3_00420 PF01467 Cytidylyltransferase-like KUC3_00420 PF00294 pfkB family carbohydrate kinase KUC3_00430 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KUC3_00440 PF00440 Bacterial regulatory proteins, tetR family KUC3_00450 PF04127 DNA / pantothenate metabolism flavoprotein KUC3_00450 PF02441 Flavoprotein KUC3_00460 PF04002 RadC-like JAB domain KUC3_00490 PF06251 Capsule biosynthesis GfcC KUC3_00500 PF06082 Exopolysaccharide biosynthesis protein YbjH KUC3_00510 PF00830 Ribosomal L28 family KUC3_00520 PF00471 Ribosomal protein L33 KUC3_00540 PF06827 Zinc finger found in FPG and IleRS KUC3_00540 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KUC3_00540 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KUC3_00550 PF01467 Cytidylyltransferase-like KUC3_00570 PF01075 Glycosyltransferase family 9 (heptosyltransferase) KUC3_00600 PF03707 Bacterial signalling protein N terminal repeat KUC3_00600 PF00990 Diguanylate cyclase, GGDEF domain KUC3_00600 PF00563 EAL domain KUC3_00610 PF00155 Aminotransferase class I and II KUC3_00620 PF08240 Alcohol dehydrogenase GroES-like domain KUC3_00620 PF00107 Zinc-binding dehydrogenase KUC3_00630 PF00581 Rhodanese-like domain KUC3_00640 PF01694 Rhomboid family KUC3_00640 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease KUC3_00660 PF04345 Chorismate lyase KUC3_00670 PF01040 UbiA prenyltransferase family KUC3_00700 PF04380 Membrane fusogenic activity KUC3_00710 PF13361 UvrD-like helicase C-terminal domain KUC3_00710 PF00580 UvrD/REP helicase N-terminal domain KUC3_00720 PF00990 Diguanylate cyclase, GGDEF domain KUC3_00720 PF00563 EAL domain KUC3_00720 PF03707 Bacterial signalling protein N terminal repeat KUC3_00730 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KUC3_00790 PF08241 Methyltransferase domain KUC3_00820 PF04542 Sigma-70 region 2 KUC3_00820 PF08281 Sigma-70, region 4 KUC3_00830 PF13193 AMP-binding enzyme C-terminal domain KUC3_00830 PF00501 AMP-binding enzyme KUC3_00860 PF02785 Biotin carboxylase C-terminal domain KUC3_00860 PF00289 Biotin carboxylase, N-terminal domain KUC3_00860 PF00364 Biotin-requiring enzyme KUC3_00860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KUC3_00870 PF00378 Enoyl-CoA hydratase/isomerase KUC3_00880 PF01039 Carboxyl transferase domain KUC3_00890 PF03060 Nitronate monooxygenase KUC3_00900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUC3_00900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUC3_00900 PF02770 Acyl-CoA dehydrogenase, middle domain KUC3_00920 PF00512 His Kinase A (phospho-acceptor) domain KUC3_00920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_00930 PF00072 Response regulator receiver domain KUC3_00930 PF00158 Sigma-54 interaction domain KUC3_00930 PF02954 Bacterial regulatory protein, Fis family KUC3_00950 PF00005 ABC transporter KUC3_00960 PF12704 MacB-like periplasmic core domain KUC3_00960 PF02687 FtsX-like permease family KUC3_00970 PF17158 Membrane-associated sensor, integral membrane domain KUC3_00970 PF00990 Diguanylate cyclase, GGDEF domain KUC3_00980 PF00072 Response regulator receiver domain KUC3_00980 PF00486 Transcriptional regulatory protein, C terminal KUC3_00990 PF00512 His Kinase A (phospho-acceptor) domain KUC3_00990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_00990 PF00672 HAMP domain KUC3_01010 PF00595 PDZ domain KUC3_01010 PF11818 C-terminal domain of tail specific protease (DUF3340) KUC3_01010 PF17804 Tail specific protease N-terminal domain KUC3_01010 PF03572 Peptidase family S41 KUC3_01030 PF00593 TonB dependent receptor KUC3_01030 PF07715 TonB-dependent Receptor Plug Domain KUC3_01050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUC3_01050 PF02770 Acyl-CoA dehydrogenase, middle domain KUC3_01050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUC3_01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_01060 PF03466 LysR substrate binding domain KUC3_01080 PF04317 YcjX-like family, DUF463 KUC3_01120 PF06968 Biotin and Thiamin Synthesis associated domain KUC3_01120 PF04055 Radical SAM superfamily KUC3_01130 PF05690 Thiazole biosynthesis protein ThiG KUC3_01150 PF00899 ThiF family KUC3_01160 PF02581 Thiamine monophosphate synthase KUC3_01170 PF13667 ThiC-associated domain KUC3_01170 PF01964 Radical SAM ThiC family KUC3_01180 PF07719 Tetratricopeptide repeat KUC3_01180 PF07219 HemY protein N-terminus KUC3_01190 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase KUC3_01200 PF02602 Uroporphyrinogen-III synthase HemD KUC3_01210 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KUC3_01210 PF03900 Porphobilinogen deaminase, C-terminal domain KUC3_01220 PF00072 Response regulator receiver domain KUC3_01220 PF00990 Diguanylate cyclase, GGDEF domain KUC3_01240 PF00625 Guanylate kinase KUC3_01250 PF01192 RNA polymerase Rpb6 KUC3_01260 PF02824 TGS domain KUC3_01260 PF04607 Region found in RelA / SpoT proteins KUC3_01260 PF13291 ACT domain KUC3_01270 PF01042 Endoribonuclease L-PSP KUC3_01280 PF12105 SpoU, rRNA methylase, C-terminal KUC3_01280 PF00588 SpoU rRNA Methylase family KUC3_01310 PF17191 RecG wedge domain KUC3_01310 PF00271 Helicase conserved C-terminal domain KUC3_01310 PF00270 DEAD/DEAH box helicase KUC3_01320 PF04445 Putative SAM-dependent methyltransferase KUC3_01330 PF08534 Redoxin KUC3_01360 PF00528 Binding-protein-dependent transport system inner membrane component KUC3_01370 PF08402 TOBE domain KUC3_01370 PF00005 ABC transporter KUC3_01430 PF00990 Diguanylate cyclase, GGDEF domain KUC3_01450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_01450 PF03466 LysR substrate binding domain KUC3_01460 PF01810 LysE type translocator KUC3_01490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KUC3_01490 PF00529 HlyD membrane-fusion protein of T1SS KUC3_01500 PF00873 AcrB/AcrD/AcrF family KUC3_01520 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain KUC3_01520 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain KUC3_01530 PF00850 Histone deacetylase domain KUC3_01560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_01560 PF00672 HAMP domain KUC3_01560 PF02743 Cache domain KUC3_01580 PF11737 Protein of unknown function (DUF3300) KUC3_01590 PF00925 GTP cyclohydrolase II KUC3_01600 PF00990 Diguanylate cyclase, GGDEF domain KUC3_01600 PF00563 EAL domain KUC3_01600 PF08448 PAS fold KUC3_01630 PF00271 Helicase conserved C-terminal domain KUC3_01630 PF00570 HRDC domain KUC3_01630 PF16124 RecQ zinc-binding KUC3_01630 PF09382 RQC domain KUC3_01630 PF00270 DEAD/DEAH box helicase KUC3_01640 PF03061 Thioesterase superfamily KUC3_01650 PF01769 Divalent cation transporter KUC3_01650 PF00571 CBS domain KUC3_01650 PF03448 MgtE intracellular N domain KUC3_01660 PF00892 EamA-like transporter family KUC3_01670 PF00072 Response regulator receiver domain KUC3_01670 PF00990 Diguanylate cyclase, GGDEF domain KUC3_01680 PF13361 UvrD-like helicase C-terminal domain KUC3_01680 PF00580 UvrD/REP helicase N-terminal domain KUC3_01690 PF06426 Serine acetyltransferase, N-terminal KUC3_01690 PF00132 Bacterial transferase hexapeptide (six repeats) KUC3_01700 PF00990 Diguanylate cyclase, GGDEF domain KUC3_01710 PF13419 Haloacid dehalogenase-like hydrolase KUC3_01720 PF00589 Phage integrase family KUC3_01720 PF02899 Phage integrase, N-terminal SAM-like domain KUC3_01740 PF01678 Diaminopimelate epimerase KUC3_01750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KUC3_01750 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KUC3_01770 PF01569 PAP2 superfamily KUC3_01780 PF03737 Aldolase/RraA KUC3_01800 PF02441 Flavoprotein KUC3_01810 PF01225 Mur ligase family, catalytic domain KUC3_01810 PF02875 Mur ligase family, glutamate ligase domain KUC3_01810 PF08245 Mur ligase middle domain KUC3_01820 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain KUC3_01830 PF00719 Inorganic pyrophosphatase KUC3_01850 PF00392 Bacterial regulatory proteins, gntR family KUC3_01850 PF00155 Aminotransferase class I and II KUC3_01860 PF00701 Dihydrodipicolinate synthetase family KUC3_01900 PF00106 short chain dehydrogenase KUC3_01910 PF12704 MacB-like periplasmic core domain KUC3_01910 PF02687 FtsX-like permease family KUC3_01910 PF00005 ABC transporter KUC3_01920 PF00005 ABC transporter KUC3_01920 PF02687 FtsX-like permease family KUC3_01920 PF12704 MacB-like periplasmic core domain KUC3_01930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KUC3_01960 PF00005 ABC transporter KUC3_02040 PF03472 Autoinducer binding domain KUC3_02040 PF00196 Bacterial regulatory proteins, luxR family KUC3_02090 PF00005 ABC transporter KUC3_02090 PF17755 UvrA DNA-binding domain KUC3_02090 PF17760 UvrA interaction domain KUC3_02100 PF07690 Major Facilitator Superfamily KUC3_02110 PF13419 Haloacid dehalogenase-like hydrolase KUC3_02140 PF00356 Bacterial regulatory proteins, lacI family KUC3_02150 PF01263 Aldose 1-epimerase KUC3_02160 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KUC3_02160 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KUC3_02170 PF10509 Galactokinase galactose-binding signature KUC3_02170 PF00288 GHMP kinases N terminal domain KUC3_02170 PF08544 GHMP kinases C terminal KUC3_02180 PF00474 Sodium:solute symporter family KUC3_02190 PF00436 Single-strand binding protein family KUC3_02230 PF16874 Glycosyl hydrolase family 36 C-terminal domain KUC3_02230 PF16875 Glycosyl hydrolase family 36 N-terminal domain KUC3_02250 PF00474 Sodium:solute symporter family KUC3_02270 PF04820 Tryptophan halogenase KUC3_02290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KUC3_02290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KUC3_02300 PF08220 DeoR-like helix-turn-helix domain KUC3_02300 PF00455 DeoR C terminal sensor domain KUC3_02310 PF01266 FAD dependent oxidoreductase KUC3_02310 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KUC3_02350 PF04085 rod shape-determining protein MreC KUC3_02360 PF04093 rod shape-determining protein MreD KUC3_02370 PF02545 Maf-like protein KUC3_02380 PF00575 S1 RNA binding domain KUC3_02380 PF10150 Ribonuclease E/G family KUC3_02400 PF00795 Carbon-nitrogen hydrolase KUC3_02410 PF01523 Putative modulator of DNA gyrase KUC3_02440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_02440 PF00512 His Kinase A (phospho-acceptor) domain KUC3_02440 PF09308 LuxQ, periplasmic KUC3_02440 PF00072 Response regulator receiver domain KUC3_02450 PF04751 Protein of unknown function (DUF615) KUC3_02460 PF01523 Putative modulator of DNA gyrase KUC3_02470 PF12833 Helix-turn-helix domain KUC3_02480 PF02929 Beta galactosidase small chain KUC3_02480 PF16353 Domain of unknown function(DUF4981) KUC3_02480 PF00703 Glycosyl hydrolases family 2 KUC3_02480 PF02836 Glycosyl hydrolases family 2, TIM barrel domain KUC3_02480 PF02837 Glycosyl hydrolases family 2, sugar binding domain KUC3_02490 PF00072 Response regulator receiver domain KUC3_02490 PF00486 Transcriptional regulatory protein, C terminal KUC3_02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_02500 PF00512 His Kinase A (phospho-acceptor) domain KUC3_02500 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUC3_02510 PF00534 Glycosyl transferases group 1 KUC3_02510 PF08323 Starch synthase catalytic domain KUC3_02520 PF05175 Methyltransferase small domain KUC3_02520 PF08468 Methyltransferase small domain N-terminal KUC3_02530 PF02390 Putative methyltransferase KUC3_02550 PF14815 NUDIX domain KUC3_02550 PF00633 Helix-hairpin-helix motif KUC3_02550 PF00730 HhH-GPD superfamily base excision DNA repair protein KUC3_02560 PF04362 Bacterial Fe(2+) trafficking KUC3_02580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_02580 PF00672 HAMP domain KUC3_02580 PF02743 Cache domain KUC3_02590 PF00072 Response regulator receiver domain KUC3_02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_02600 PF02895 Signal transducing histidine kinase, homodimeric domain KUC3_02600 PF01627 Hpt domain KUC3_02600 PF09078 CheY binding KUC3_02600 PF01584 CheW-like domain KUC3_02610 PF01584 CheW-like domain KUC3_02640 PF13419 Haloacid dehalogenase-like hydrolase KUC3_02660 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KUC3_02660 PF00356 Bacterial regulatory proteins, lacI family KUC3_02680 PF01204 Trehalase KUC3_02690 PF04542 Sigma-70 region 2 KUC3_02690 PF08281 Sigma-70, region 4 KUC3_02720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_02720 PF00512 His Kinase A (phospho-acceptor) domain KUC3_02720 PF09308 LuxQ, periplasmic KUC3_02720 PF00072 Response regulator receiver domain KUC3_02760 PF13419 Haloacid dehalogenase-like hydrolase KUC3_02780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_02780 PF00072 Response regulator receiver domain KUC3_02780 PF00512 His Kinase A (phospho-acceptor) domain KUC3_02780 PF09456 RcsC Alpha-Beta-Loop (ABL) KUC3_02810 PF00356 Bacterial regulatory proteins, lacI family KUC3_02820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KUC3_02820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KUC3_02860 PF03825 Nucleoside H+ symporter KUC3_02870 PF03825 Nucleoside H+ symporter KUC3_02940 PF05199 GMC oxidoreductase KUC3_02940 PF00732 GMC oxidoreductase KUC3_02990 PF00465 Iron-containing alcohol dehydrogenase KUC3_03040 PF01063 Amino-transferase class IV KUC3_03050 PF00300 Histidine phosphatase superfamily (branch 1) KUC3_03070 PF00694 Aconitase C-terminal domain KUC3_03070 PF00330 Aconitase family (aconitate hydratase) KUC3_03080 PF00437 Type II/IV secretion system protein KUC3_03080 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain KUC3_03100 PF00338 Ribosomal protein S10p/S20e KUC3_03110 PF00297 Ribosomal protein L3 KUC3_03120 PF00573 Ribosomal protein L4/L1 family KUC3_03130 PF00276 Ribosomal protein L23 KUC3_03140 PF00181 Ribosomal Proteins L2, RNA binding domain KUC3_03140 PF03947 Ribosomal Proteins L2, C-terminal domain KUC3_03150 PF00203 Ribosomal protein S19 KUC3_03160 PF00237 Ribosomal protein L22p/L17e KUC3_03170 PF07650 KH domain KUC3_03170 PF00189 Ribosomal protein S3, C-terminal domain KUC3_03180 PF00252 Ribosomal protein L16p/L10e KUC3_03190 PF00831 Ribosomal L29 protein KUC3_03200 PF00366 Ribosomal protein S17 KUC3_03210 PF13439 Glycosyltransferase Family 4 KUC3_03210 PF00534 Glycosyl transferases group 1 KUC3_03230 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) KUC3_03270 PF02743 Cache domain KUC3_03270 PF00672 HAMP domain KUC3_03270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_03280 PF01432 Peptidase family M3 KUC3_03310 PF00551 Formyl transferase KUC3_03310 PF01842 ACT domain KUC3_03330 PF00271 Helicase conserved C-terminal domain KUC3_03330 PF04408 Helicase associated domain (HA2) KUC3_03330 PF08482 ATP-dependent helicase C-terminal KUC3_03330 PF00270 DEAD/DEAH box helicase KUC3_03340 PF13406 Transglycosylase SLT domain KUC3_03350 PF00912 Transglycosylase KUC3_03350 PF00905 Penicillin binding protein transpeptidase domain KUC3_03350 PF14814 Bifunctional transglycosylase second domain KUC3_03370 PF05661 Protein of unknown function (DUF808) KUC3_03410 PF00543 Nitrogen regulatory protein P-II KUC3_03420 PF00909 Ammonium Transporter Family KUC3_03440 PF04261 Dyp-type peroxidase family KUC3_03450 PF00202 Aminotransferase class-III KUC3_03460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KUC3_03460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KUC3_03480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KUC3_03490 PF00873 AcrB/AcrD/AcrF family KUC3_03510 PF00072 Response regulator receiver domain KUC3_03510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KUC3_03510 PF01627 Hpt domain KUC3_03510 PF00512 His Kinase A (phospho-acceptor) domain KUC3_03510 PF00672 HAMP domain KUC3_03510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_03520 PF03989 DNA gyrase C-terminal domain, beta-propeller KUC3_03520 PF00521 DNA gyrase/topoisomerase IV, subunit A KUC3_03540 PF13188 PAS domain KUC3_03540 PF03707 Bacterial signalling protein N terminal repeat KUC3_03540 PF00990 Diguanylate cyclase, GGDEF domain KUC3_03540 PF00563 EAL domain KUC3_03560 PF00171 Aldehyde dehydrogenase family KUC3_03570 PF04958 Arginine N-succinyltransferase beta subunit KUC3_03580 PF00202 Aminotransferase class-III KUC3_03600 PF00117 Glutamine amidotransferase class-I KUC3_03610 PF00579 tRNA synthetases class I (W and Y) KUC3_03620 PF00834 Ribulose-phosphate 3 epimerase family KUC3_03660 PF02086 D12 class N6 adenine-specific DNA methyltransferase KUC3_03680 PF01761 3-dehydroquinate synthase KUC3_03690 PF01202 Shikimate kinase KUC3_03700 PF11741 AMIN domain KUC3_03700 PF03958 Bacterial type II/III secretion system short domain KUC3_03700 PF07660 Secretin and TonB N terminus short domain KUC3_03700 PF00263 Bacterial type II and III secretion system protein KUC3_03720 PF04350 Pilus assembly protein, PilO KUC3_03740 PF11104 Type IV pilus assembly protein PilM; KUC3_03750 PF17092 Penicillin-binding protein OB-like domain KUC3_03750 PF00912 Transglycosylase KUC3_03750 PF00905 Penicillin binding protein transpeptidase domain KUC3_03760 PF03949 Malic enzyme, NAD binding domain KUC3_03760 PF00390 Malic enzyme, N-terminal domain KUC3_03780 PF02798 Glutathione S-transferase, N-terminal domain KUC3_03830 PF00563 EAL domain KUC3_03830 PF00990 Diguanylate cyclase, GGDEF domain KUC3_03830 PF03707 Bacterial signalling protein N terminal repeat KUC3_03840 PF00583 Acetyltransferase (GNAT) family KUC3_03840 PF00696 Amino acid kinase family KUC3_03850 PF00206 Lyase KUC3_03850 PF14698 Argininosuccinate lyase C-terminal KUC3_03860 PF00764 Arginosuccinate synthase KUC3_03870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KUC3_03870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KUC3_03880 PF00696 Amino acid kinase family KUC3_03890 PF01118 Semialdehyde dehydrogenase, NAD binding domain KUC3_03890 PF02774 Semialdehyde dehydrogenase, dimerisation domain KUC3_03900 PF02142 MGS-like domain KUC3_03920 PF00486 Transcriptional regulatory protein, C terminal KUC3_03920 PF00072 Response regulator receiver domain KUC3_03930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_03930 PF00512 His Kinase A (phospho-acceptor) domain KUC3_03930 PF16527 Two-component sensor protein CpxA, periplasmic domain KUC3_03930 PF00672 HAMP domain KUC3_03940 PF12146 Serine aminopeptidase, S33 KUC3_03950 PF00588 SpoU rRNA Methylase family KUC3_03960 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KUC3_03960 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KUC3_03970 PF02556 Preprotein translocase subunit SecB KUC3_03980 PF00462 Glutaredoxin KUC3_03990 PF00581 Rhodanese-like domain KUC3_04000 PF01551 Peptidase family M23 KUC3_04010 PF04748 Divergent polysaccharide deacetylase KUC3_04030 PF03009 Glycerophosphoryl diester phosphodiesterase family KUC3_04050 PF02666 Phosphatidylserine decarboxylase KUC3_04060 PF03193 RsgA GTPase KUC3_04070 PF00929 Exonuclease KUC3_04080 PF00593 TonB dependent receptor KUC3_04080 PF07715 TonB-dependent Receptor Plug Domain KUC3_04090 PF13181 Tetratricopeptide repeat KUC3_04120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KUC3_04120 PF00205 Thiamine pyrophosphate enzyme, central domain KUC3_04120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KUC3_04130 PF10369 Small subunit of acetolactate synthase KUC3_04140 PF01979 Amidohydrolase family KUC3_04150 PF03606 C4-dicarboxylate anaerobic carrier KUC3_04160 PF07715 TonB-dependent Receptor Plug Domain KUC3_04160 PF00593 TonB dependent receptor KUC3_04170 PF03575 Peptidase family S51 KUC3_04190 PF02416 mttA/Hcf106 family KUC3_04200 PF02416 mttA/Hcf106 family KUC3_04210 PF00902 Sec-independent protein translocase protein (TatC) KUC3_04230 PF01026 TatD related DNase KUC3_04240 PF00990 Diguanylate cyclase, GGDEF domain KUC3_04240 PF00360 Phytochrome region KUC3_04240 PF00563 EAL domain KUC3_04240 PF01590 GAF domain KUC3_04250 PF00490 Delta-aminolevulinic acid dehydratase KUC3_04260 PF02541 Ppx/GppA phosphatase family KUC3_04270 PF00270 DEAD/DEAH box helicase KUC3_04270 PF00271 Helicase conserved C-terminal domain KUC3_04280 PF00085 Thioredoxin KUC3_04290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KUC3_04290 PF07497 Rho termination factor, RNA-binding domain KUC3_04290 PF07498 Rho termination factor, N-terminal domain KUC3_04300 PF07687 Peptidase dimerisation domain KUC3_04300 PF01546 Peptidase family M20/M25/M40 KUC3_04310 PF00072 Response regulator receiver domain KUC3_04310 PF09308 LuxQ, periplasmic KUC3_04310 PF00512 His Kinase A (phospho-acceptor) domain KUC3_04310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_04320 PF06965 Na+/H+ antiporter 1 KUC3_04330 PF00731 AIR carboxylase KUC3_04340 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KUC3_04340 PF02222 ATP-grasp domain KUC3_04360 PF00210 Ferritin-like domain KUC3_04370 PF07995 Glucose / Sorbosone dehydrogenase KUC3_04380 PF00326 Prolyl oligopeptidase family KUC3_04380 PF07676 WD40-like Beta Propeller Repeat KUC3_04400 PF00085 Thioredoxin KUC3_04430 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) KUC3_04440 PF00709 Adenylosuccinate synthetase KUC3_04450 PF00171 Aldehyde dehydrogenase family KUC3_04500 PF03553 Na+/H+ antiporter family KUC3_04510 PF00933 Glycosyl hydrolase family 3 N terminal domain KUC3_04530 PF07075 Protein of unknown function (DUF1343) KUC3_04540 PF01380 SIS domain KUC3_04550 PF01168 Alanine racemase, N-terminal domain KUC3_04550 PF00842 Alanine racemase, C-terminal domain KUC3_04580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KUC3_04640 PF00464 Serine hydroxymethyltransferase KUC3_04650 PF03466 LysR substrate binding domain KUC3_04650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_04660 PF03831 PhnA domain KUC3_04660 PF08274 PhnA Zinc-Ribbon KUC3_04670 PF00583 Acetyltransferase (GNAT) family KUC3_04960 PF01548 Transposase KUC3_04960 PF02371 Transposase IS116/IS110/IS902 family KUC3_05030 PF02371 Transposase IS116/IS110/IS902 family KUC3_05030 PF01548 Transposase KUC3_05100 PF02371 Transposase IS116/IS110/IS902 family KUC3_05100 PF01548 Transposase KUC3_05120 PF13495 Phage integrase, N-terminal SAM-like domain KUC3_05120 PF00589 Phage integrase family KUC3_05130 PF02803 Thiolase, C-terminal domain KUC3_05130 PF00108 Thiolase, N-terminal domain KUC3_05140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KUC3_05140 PF00378 Enoyl-CoA hydratase/isomerase KUC3_05140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KUC3_05150 PF10145 Phage-related minor tail protein KUC3_05150 PF01464 Transglycosylase SLT domain KUC3_05150 PF01551 Peptidase family M23 KUC3_05160 PF00557 Metallopeptidase family M24 KUC3_05180 PF00348 Polyprenyl synthetase KUC3_05190 PF00829 Ribosomal prokaryotic L21 protein KUC3_05200 PF01016 Ribosomal L27 protein KUC3_05210 PF01926 50S ribosome-binding GTPase KUC3_05210 PF01018 GTP1/OBG KUC3_05220 PF00186 Dihydrofolate reductase KUC3_05230 PF00140 Sigma-70 factor, region 1.2 KUC3_05230 PF04545 Sigma-70, region 4 KUC3_05230 PF04542 Sigma-70 region 2 KUC3_05230 PF04539 Sigma-70 region 3 KUC3_05240 PF01551 Peptidase family M23 KUC3_05240 PF01476 LysM domain KUC3_05250 PF09335 SNARE associated Golgi protein KUC3_05270 PF01142 tRNA pseudouridine synthase D (TruD) KUC3_05280 PF02542 YgbB family KUC3_05290 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KUC3_05300 PF04977 Septum formation initiator KUC3_05320 PF17200 Single Cache domain 2 KUC3_05320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_05320 PF00672 HAMP domain KUC3_05330 PF13404 AsnC-type helix-turn-helix domain KUC3_05330 PF01037 Lrp/AsnC ligand binding domain KUC3_05340 PF08240 Alcohol dehydrogenase GroES-like domain KUC3_05340 PF00107 Zinc-binding dehydrogenase KUC3_05350 PF14850 DNA-binding domain of Proline dehydrogenase KUC3_05350 PF01619 Proline dehydrogenase KUC3_05350 PF18327 Proline utilization A proline dehydrogenase N-terminal domain KUC3_05350 PF00171 Aldehyde dehydrogenase family KUC3_05360 PF08239 Bacterial SH3 domain KUC3_05390 PF02976 DNA mismatch repair enzyme MutH KUC3_05400 PF00293 NUDIX domain KUC3_05410 PF00391 PEP-utilising enzyme, mobile domain KUC3_05410 PF05524 PEP-utilising enzyme, N-terminal KUC3_05410 PF01590 GAF domain KUC3_05410 PF02896 PEP-utilising enzyme, TIM barrel domain KUC3_05420 PF01925 Sulfite exporter TauE/SafE KUC3_05430 PF01790 Prolipoprotein diacylglyceryl transferase KUC3_05440 PF00303 Thymidylate synthase KUC3_05450 PF00072 Response regulator receiver domain KUC3_05460 PF05230 MASE2 domain KUC3_05460 PF00990 Diguanylate cyclase, GGDEF domain KUC3_05470 PF00672 HAMP domain KUC3_05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_05470 PF00512 His Kinase A (phospho-acceptor) domain KUC3_05470 PF01627 Hpt domain KUC3_05470 PF00072 Response regulator receiver domain KUC3_05470 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KUC3_05480 PF07690 Major Facilitator Superfamily KUC3_05510 PF00849 RNA pseudouridylate synthase KUC3_05520 PF18339 RapA N-terminal Tudor like domain 1 KUC3_05520 PF00176 SNF2 family N-terminal domain KUC3_05520 PF12137 RNA polymerase recycling family C-terminal KUC3_05520 PF18337 RapA N-terminal Tudor like domain KUC3_05520 PF00271 Helicase conserved C-terminal domain KUC3_05540 PF13638 PIN domain KUC3_05540 PF02562 PhoH-like protein KUC3_05550 PF00392 Bacterial regulatory proteins, gntR family KUC3_05550 PF00155 Aminotransferase class I and II KUC3_05560 PF12801 4Fe-4S binding domain KUC3_05560 PF13746 4Fe-4S dicluster domain KUC3_05560 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KUC3_05580 PF10414 Sirohaem synthase dimerisation region KUC3_05580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KUC3_05590 PF00271 Helicase conserved C-terminal domain KUC3_05590 PF12343 Cold shock protein DEAD box A KUC3_05590 PF00270 DEAD/DEAH box helicase KUC3_05590 PF03880 DbpA RNA binding domain KUC3_05630 PF02321 Outer membrane efflux protein KUC3_05640 PF00293 NUDIX domain KUC3_05670 PF05728 Uncharacterised protein family (UPF0227) KUC3_05680 PF01751 Toprim domain KUC3_05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_05680 PF00204 DNA gyrase B KUC3_05680 PF00986 DNA gyrase B subunit, carboxyl terminus KUC3_05730 PF04055 Radical SAM superfamily KUC3_05740 PF01132 Elongation factor P (EF-P) OB domain KUC3_05740 PF09285 Elongation factor P, C-terminal KUC3_05740 PF08207 Elongation factor P (EF-P) KOW-like domain KUC3_05750 PF00152 tRNA synthetases class II (D, K and N) KUC3_05760 PF07715 TonB-dependent Receptor Plug Domain KUC3_05760 PF00593 TonB dependent receptor KUC3_05790 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KUC3_05800 PF05175 Methyltransferase small domain KUC3_05830 PF01722 BolA-like protein KUC3_05840 PF01569 PAP2 superfamily KUC3_05860 PF08376 Nitrate and nitrite sensing KUC3_05860 PF03861 ANTAR domain KUC3_05880 PF01740 STAS domain KUC3_05880 PF00916 Sulfate permease family KUC3_05890 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_05890 PF04324 BFD-like [2Fe-2S] binding domain KUC3_05890 PF18267 Rubredoxin NAD+ reductase C-terminal domain KUC3_05890 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KUC3_05890 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KUC3_05900 PF13806 Rieske-like [2Fe-2S] domain KUC3_05910 PF00384 Molybdopterin oxidoreductase KUC3_05910 PF01568 Molydopterin dinucleotide binding domain KUC3_05910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KUC3_05910 PF04324 BFD-like [2Fe-2S] binding domain KUC3_05920 PF10414 Sirohaem synthase dimerisation region KUC3_05920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KUC3_05920 PF14824 Sirohaem biosynthesis protein central KUC3_05930 PF02885 Glycosyl transferase family, helical bundle domain KUC3_05930 PF00591 Glycosyl transferase family, a/b domain KUC3_05950 PF17158 Membrane-associated sensor, integral membrane domain KUC3_05950 PF00990 Diguanylate cyclase, GGDEF domain KUC3_05960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_05960 PF13426 PAS domain KUC3_05960 PF08447 PAS fold KUC3_05970 PF00005 ABC transporter KUC3_05980 PF00528 Binding-protein-dependent transport system inner membrane component KUC3_05990 PF00005 ABC transporter KUC3_06010 PF12804 MobA-like NTP transferase domain KUC3_06030 PF01323 DSBA-like thioredoxin domain KUC3_06040 PF00593 TonB dependent receptor KUC3_06040 PF07715 TonB-dependent Receptor Plug Domain KUC3_06050 PF01636 Phosphotransferase enzyme family KUC3_06060 PF12801 4Fe-4S binding domain KUC3_06060 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase KUC3_06060 PF13746 4Fe-4S dicluster domain KUC3_06090 PF02770 Acyl-CoA dehydrogenase, middle domain KUC3_06090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUC3_06090 PF12806 Acetyl-CoA dehydrogenase C-terminal like KUC3_06090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUC3_06110 PF04909 Amidohydrolase KUC3_06120 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KUC3_06120 PF13378 Enolase C-terminal domain-like KUC3_06130 PF00596 Class II Aldolase and Adducin N-terminal domain KUC3_06150 PF13533 Biotin-lipoyl like KUC3_06160 PF00873 AcrB/AcrD/AcrF family KUC3_06190 PF02743 Cache domain KUC3_06190 PF00672 HAMP domain KUC3_06190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_06200 PF04542 Sigma-70 region 2 KUC3_06200 PF04539 Sigma-70 region 3 KUC3_06200 PF04545 Sigma-70, region 4 KUC3_06200 PF04546 Sigma-70, non-essential region KUC3_06200 PF03979 Sigma-70 factor, region 1.1 KUC3_06200 PF00140 Sigma-70 factor, region 1.2 KUC3_06210 PF01807 CHC2 zinc finger KUC3_06210 PF10410 DnaB-helicase binding domain of primase KUC3_06210 PF08278 DNA primase DnaG DnaB-binding KUC3_06210 PF08275 DNA primase catalytic core, N-terminal domain KUC3_06230 PF01165 Ribosomal protein S21 KUC3_06240 PF00814 Glycoprotease family KUC3_06260 PF02660 Glycerol-3-phosphate acyltransferase KUC3_06270 PF02152 Dihydroneopterin aldolase KUC3_06290 PF02673 Bacitracin resistance protein BacA KUC3_06300 PF01230 HIT domain KUC3_06330 PF03594 Benzoate membrane transport protein KUC3_06340 PF07883 Cupin domain KUC3_06340 PF01381 Helix-turn-helix KUC3_06350 PF04381 Putative exonuclease, RdgC KUC3_06360 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUC3_06360 PF00512 His Kinase A (phospho-acceptor) domain KUC3_06360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_06370 PF00486 Transcriptional regulatory protein, C terminal KUC3_06370 PF00072 Response regulator receiver domain KUC3_06380 PF00989 PAS fold KUC3_06380 PF11808 Phosphate regulon sensor protein PhoR KUC3_06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_06380 PF00512 His Kinase A (phospho-acceptor) domain KUC3_06390 PF12849 PBP superfamily domain KUC3_06440 PF01618 MotA/TolQ/ExbB proton channel family KUC3_06450 PF01618 MotA/TolQ/ExbB proton channel family KUC3_06460 PF02472 Biopolymer transport protein ExbD/TolR KUC3_06470 PF03544 Gram-negative bacterial TonB protein C-terminal KUC3_06490 PF00072 Response regulator receiver domain KUC3_06500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_06500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KUC3_06500 PF01627 Hpt domain KUC3_06500 PF00512 His Kinase A (phospho-acceptor) domain KUC3_06500 PF00072 Response regulator receiver domain KUC3_06500 PF00672 HAMP domain KUC3_06520 PF00501 AMP-binding enzyme KUC3_06520 PF13193 AMP-binding enzyme C-terminal domain KUC3_06540 PF07995 Glucose / Sorbosone dehydrogenase KUC3_06550 PF00330 Aconitase family (aconitate hydratase) KUC3_06550 PF06434 Aconitate hydratase 2 N-terminus KUC3_06550 PF11791 Aconitate B N-terminal domain KUC3_06570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KUC3_06570 PF00672 HAMP domain KUC3_06570 PF00072 Response regulator receiver domain KUC3_06570 PF01627 Hpt domain KUC3_06570 PF00512 His Kinase A (phospho-acceptor) domain KUC3_06570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_06580 PF00756 Putative esterase KUC3_06610 PF14743 DNA ligase OB-like domain KUC3_06610 PF01068 ATP dependent DNA ligase domain KUC3_06630 PF01842 ACT domain KUC3_06630 PF00696 Amino acid kinase family KUC3_06640 PF00990 Diguanylate cyclase, GGDEF domain KUC3_06640 PF00563 EAL domain KUC3_06640 PF01590 GAF domain KUC3_06640 PF00360 Phytochrome region KUC3_06650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_06650 PF00672 HAMP domain KUC3_06660 PF00149 Calcineurin-like phosphoesterase KUC3_06670 PF04379 ApaG domain KUC3_06680 PF00398 Ribosomal RNA adenine dimethylase KUC3_06690 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KUC3_06700 PF00639 PPIC-type PPIASE domain KUC3_06700 PF09312 SurA N-terminal domain KUC3_06710 PF04453 LPS transport system D KUC3_06710 PF03968 OstA-like protein KUC3_06720 PF00226 DnaJ domain KUC3_06720 PF05099 Tellurite resistance protein TerB KUC3_06730 PF00589 Phage integrase family KUC3_06730 PF02899 Phage integrase, N-terminal SAM-like domain KUC3_06740 PF10411 Disulfide bond isomerase protein N-terminus KUC3_06740 PF13098 Thioredoxin-like domain KUC3_06750 PF17768 RecJ OB domain KUC3_06750 PF02272 DHHA1 domain KUC3_06750 PF01368 DHH family KUC3_06770 PF02565 Recombination protein O C terminal KUC3_06770 PF11967 Recombination protein O N terminal KUC3_06780 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ KUC3_06790 PF01648 4'-phosphopantetheinyl transferase superfamily KUC3_06800 PF05958 tRNA (Uracil-5-)-methyltransferase KUC3_06810 PF04607 Region found in RelA / SpoT proteins KUC3_06810 PF13291 ACT domain KUC3_06810 PF02824 TGS domain KUC3_06820 PF03819 MazG nucleotide pyrophosphohydrolase domain KUC3_06840 PF07660 Secretin and TonB N terminus short domain KUC3_06840 PF00593 TonB dependent receptor KUC3_06840 PF07715 TonB-dependent Receptor Plug Domain KUC3_06880 PF00106 short chain dehydrogenase KUC3_06900 PF00501 AMP-binding enzyme KUC3_06920 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase KUC3_06940 PF00535 Glycosyl transferase family 2 KUC3_06980 PF08521 Two-component sensor kinase N-terminal KUC3_06980 PF00512 His Kinase A (phospho-acceptor) domain KUC3_06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_06990 PF00072 Response regulator receiver domain KUC3_06990 PF00486 Transcriptional regulatory protein, C terminal KUC3_07010 PF00572 Ribosomal protein L13 KUC3_07020 PF00380 Ribosomal protein S9/S16 KUC3_07030 PF00355 Rieske [2Fe-2S] domain KUC3_07030 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal KUC3_07040 PF00033 Cytochrome b/b6/petB KUC3_07040 PF00032 Cytochrome b(C-terminal)/b6/petD KUC3_07050 PF02167 Cytochrome C1 family KUC3_07060 PF02798 Glutathione S-transferase, N-terminal domain KUC3_07060 PF00043 Glutathione S-transferase, C-terminal domain KUC3_07070 PF04386 Stringent starvation protein B KUC3_07100 PF00072 Response regulator receiver domain KUC3_07100 PF00486 Transcriptional regulatory protein, C terminal KUC3_07110 PF01769 Divalent cation transporter KUC3_07110 PF03448 MgtE intracellular N domain KUC3_07110 PF00571 CBS domain KUC3_07120 PF00381 PTS HPr component phosphorylation site KUC3_07130 PF03668 P-loop ATPase protein family KUC3_07140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KUC3_07150 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KUC3_07160 PF00309 Sigma-54 factor, Activator interacting domain (AID) KUC3_07160 PF04552 Sigma-54, DNA binding domain KUC3_07160 PF04963 Sigma-54 factor, core binding domain KUC3_07170 PF12399 Branched-chain amino acid ATP-binding cassette transporter KUC3_07170 PF00005 ABC transporter KUC3_07180 PF03968 OstA-like protein KUC3_07210 PF01380 SIS domain KUC3_07210 PF00571 CBS domain KUC3_07220 PF01699 Sodium/calcium exchanger protein KUC3_07230 PF00005 ABC transporter KUC3_07240 PF02405 Permease MlaE KUC3_07250 PF02470 MlaD protein KUC3_07260 PF05494 MlaC protein KUC3_07280 PF01722 BolA-like protein KUC3_07290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KUC3_07300 PF13180 PDZ domain KUC3_07310 PF13180 PDZ domain KUC3_07310 PF00595 PDZ domain KUC3_07330 PF03969 AFG1-like ATPase KUC3_07340 PF01709 Transcriptional regulator KUC3_07380 PF03466 LysR substrate binding domain KUC3_07380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_07390 PF02567 Phenazine biosynthesis-like protein KUC3_07400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_07400 PF03466 LysR substrate binding domain KUC3_07410 PF12833 Helix-turn-helix domain KUC3_07410 PF02311 AraC-like ligand binding domain KUC3_07420 PF07681 DoxX KUC3_07450 PF00578 AhpC/TSA family KUC3_07470 PF05114 Protein of unknown function (DUF692) KUC3_07490 PF00085 Thioredoxin KUC3_07520 PF00881 Nitroreductase family KUC3_07540 PF07549 SecD/SecF GG Motif KUC3_07540 PF02355 Protein export membrane protein KUC3_07550 PF00999 Sodium/hydrogen exchanger family KUC3_07550 PF02080 TrkA-C domain KUC3_07550 PF03471 Transporter associated domain KUC3_07580 PF03193 RsgA GTPase KUC3_07640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_07640 PF00512 His Kinase A (phospho-acceptor) domain KUC3_07650 PF00486 Transcriptional regulatory protein, C terminal KUC3_07650 PF00072 Response regulator receiver domain KUC3_07660 PF00990 Diguanylate cyclase, GGDEF domain KUC3_07670 PF00892 EamA-like transporter family KUC3_07690 PF09308 LuxQ, periplasmic KUC3_07690 PF00072 Response regulator receiver domain KUC3_07690 PF00512 His Kinase A (phospho-acceptor) domain KUC3_07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_07700 PF13458 Periplasmic binding protein KUC3_07740 PF00438 S-adenosylmethionine synthetase, N-terminal domain KUC3_07740 PF02773 S-adenosylmethionine synthetase, C-terminal domain KUC3_07740 PF02772 S-adenosylmethionine synthetase, central domain KUC3_07760 PF00456 Transketolase, thiamine diphosphate binding domain KUC3_07760 PF02780 Transketolase, C-terminal domain KUC3_07760 PF02779 Transketolase, pyrimidine binding domain KUC3_07770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KUC3_07770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KUC3_07780 PF00162 Phosphoglycerate kinase KUC3_07790 PF00274 Fructose-bisphosphate aldolase class-I KUC3_07810 PF07676 WD40-like Beta Propeller Repeat KUC3_07810 PF04052 TolB amino-terminal domain KUC3_07820 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUC3_07830 PF02541 Ppx/GppA phosphatase family KUC3_07840 PF17941 Polyphosphate kinase C-terminal domain 1 KUC3_07840 PF02503 Polyphosphate kinase middle domain KUC3_07840 PF13089 Polyphosphate kinase N-terminal domain KUC3_07840 PF13090 Polyphosphate kinase C-terminal domain 2 KUC3_07860 PF00528 Binding-protein-dependent transport system inner membrane component KUC3_07870 PF00528 Binding-protein-dependent transport system inner membrane component KUC3_07880 PF00005 ABC transporter KUC3_07890 PF01895 PhoU domain KUC3_07900 PF01384 Phosphate transporter family KUC3_07920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_07920 PF03466 LysR substrate binding domain KUC3_07970 PF03006 Haemolysin-III related KUC3_07980 PF01047 MarR family KUC3_07990 PF02566 OsmC-like protein KUC3_08000 PF01433 Peptidase family M1 domain KUC3_08010 PF00144 Beta-lactamase KUC3_08030 PF09186 Domain of unknown function (DUF1949) KUC3_08030 PF01205 Uncharacterized protein family UPF0029 KUC3_08060 PF12320 Type 5 capsule protein repressor C-terminal domain KUC3_08060 PF00149 Calcineurin-like phosphoesterase KUC3_08070 PF13476 AAA domain KUC3_08090 PF01223 DNA/RNA non-specific endonuclease KUC3_08100 PF00375 Sodium:dicarboxylate symporter family KUC3_08110 PF00491 Arginase family KUC3_08120 PF01979 Amidohydrolase family KUC3_08130 PF07702 UTRA domain KUC3_08130 PF00392 Bacterial regulatory proteins, gntR family KUC3_08140 PF17391 Urocanase N-terminal domain KUC3_08140 PF01175 Urocanase Rossmann-like domain KUC3_08140 PF17392 Urocanase C-terminal domain KUC3_08150 PF00221 Aromatic amino acid lyase KUC3_08190 PF01869 BadF/BadG/BcrA/BcrD ATPase family KUC3_08200 PF01979 Amidohydrolase family KUC3_08220 PF00005 ABC transporter KUC3_08220 PF12848 ABC transporter KUC3_08230 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KUC3_08240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KUC3_08240 PF00361 Proton-conducting membrane transporter KUC3_08250 PF01300 Telomere recombination KUC3_08260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_08260 PF03466 LysR substrate binding domain KUC3_08300 PF00924 Mechanosensitive ion channel KUC3_08320 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KUC3_08320 PF11852 Domain of unknown function (DUF3372) KUC3_08320 PF03714 Bacterial pullanase-associated domain KUC3_08320 PF18494 Pullulanase Ins domain KUC3_08320 PF17967 Pullulanase N2 domain KUC3_08330 PF02525 Flavodoxin-like fold KUC3_08340 PF03466 LysR substrate binding domain KUC3_08340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_08360 PF02397 Bacterial sugar transferase KUC3_08400 PF03150 Di-haem cytochrome c peroxidase KUC3_08400 PF00034 Cytochrome c KUC3_08440 PF04397 LytTr DNA-binding domain KUC3_08440 PF00072 Response regulator receiver domain KUC3_08460 PF04172 LrgB-like family KUC3_08470 PF00072 Response regulator receiver domain KUC3_08530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_08530 PF03466 LysR substrate binding domain KUC3_08540 PF06969 HemN C-terminal domain KUC3_08540 PF04055 Radical SAM superfamily KUC3_08550 PF01725 Ham1 family KUC3_08560 PF00270 DEAD/DEAH box helicase KUC3_08560 PF00271 Helicase conserved C-terminal domain KUC3_08590 PF13443 Cro/C1-type HTH DNA-binding domain KUC3_08610 PF12627 Probable RNA and SrmB- binding site of polymerase A KUC3_08610 PF01743 Poly A polymerase head domain KUC3_08620 PF01471 Putative peptidoglycan binding domain KUC3_08620 PF13401 AAA domain KUC3_08640 PF11871 Domain of unknown function (DUF3391) KUC3_08640 PF01966 HD domain KUC3_08650 PF00694 Aconitase C-terminal domain KUC3_08660 PF00330 Aconitase family (aconitate hydratase) KUC3_08670 PF00180 Isocitrate/isopropylmalate dehydrogenase KUC3_08680 PF08502 LeuA allosteric (dimerisation) domain KUC3_08680 PF00682 HMGL-like KUC3_08710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KUC3_08710 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KUC3_08720 PF14592 Chondroitinase B KUC3_08730 PF07940 Heparinase II/III-like protein KUC3_08730 PF05426 Alginate lyase KUC3_08750 PF07690 Major Facilitator Superfamily KUC3_08760 PF00294 pfkB family carbohydrate kinase KUC3_08770 PF01081 KDPG and KHG aldolase KUC3_08780 PF00392 Bacterial regulatory proteins, gntR family KUC3_08780 PF07729 FCD domain KUC3_08790 PF08787 Alginate lyase KUC3_08820 PF08787 Alginate lyase KUC3_08830 PF00113 Enolase, C-terminal TIM barrel domain KUC3_08830 PF03952 Enolase, N-terminal domain KUC3_08840 PF06418 CTP synthase N-terminus KUC3_08840 PF00117 Glutamine amidotransferase class-I KUC3_08850 PF05192 MutS domain III KUC3_08850 PF05190 MutS family domain IV KUC3_08850 PF00488 MutS domain V KUC3_08850 PF01624 MutS domain I KUC3_08850 PF05188 MutS domain II KUC3_08860 PF02464 Competence-damaged protein KUC3_08870 PF00154 recA bacterial DNA recombination protein KUC3_08880 PF00005 ABC transporter KUC3_08890 PF12679 ABC-2 family transporter protein KUC3_08900 PF00512 His Kinase A (phospho-acceptor) domain KUC3_08900 PF00672 HAMP domain KUC3_08900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_08910 PF00486 Transcriptional regulatory protein, C terminal KUC3_08910 PF00072 Response regulator receiver domain KUC3_08970 PF00005 ABC transporter KUC3_08980 PF03379 CcmB protein KUC3_08990 PF01578 Cytochrome C assembly protein KUC3_09000 PF04995 Heme exporter protein D (CcmD) KUC3_09010 PF03100 CcmE KUC3_09020 PF01578 Cytochrome C assembly protein KUC3_09020 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal KUC3_09030 PF08534 Redoxin KUC3_09040 PF03918 Cytochrome C biogenesis protein KUC3_09060 PF04333 MlaA lipoprotein KUC3_09080 PF16363 GDP-mannose 4,6 dehydratase KUC3_09100 PF00854 POT family KUC3_09120 PF00005 ABC transporter KUC3_09160 PF00953 Glycosyl transferase family 4 KUC3_09190 PF00483 Nucleotidyl transferase KUC3_09210 PF18324 Hypothetical protein TT1725 KUC3_09210 PF00180 Isocitrate/isopropylmalate dehydrogenase KUC3_09240 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases KUC3_09240 PF11892 Domain of unknown function (DUF3412) KUC3_09240 PF03641 Possible lysine decarboxylase KUC3_09250 PF00990 Diguanylate cyclase, GGDEF domain KUC3_09260 PF14489 QueF-like protein KUC3_09260 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term KUC3_09270 PF07348 Syd protein (SUKH-2) KUC3_09340 PF00849 RNA pseudouridylate synthase KUC3_09350 PF00258 Flavodoxin KUC3_09360 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal KUC3_09360 PF14602 Hexapeptide repeat of succinyl-transferase KUC3_09360 PF00132 Bacterial transferase hexapeptide (six repeats) KUC3_09370 PF08335 GlnD PII-uridylyltransferase KUC3_09370 PF01966 HD domain KUC3_09370 PF01909 Nucleotidyltransferase domain KUC3_09380 PF00557 Metallopeptidase family M24 KUC3_09390 PF00318 Ribosomal protein S2 KUC3_09400 PF00889 Elongation factor TS KUC3_09410 PF00696 Amino acid kinase family KUC3_09420 PF01765 Ribosome recycling factor KUC3_09430 PF01255 Putative undecaprenyl diphosphate synthase KUC3_09450 PF13288 DXP reductoisomerase C-terminal domain KUC3_09450 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KUC3_09450 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KUC3_09460 PF17820 PDZ domain KUC3_09460 PF02163 Peptidase family M50 KUC3_09470 PF07244 Surface antigen variable number repeat KUC3_09470 PF01103 Surface antigen KUC3_09480 PF03938 Outer membrane protein (OmpH-like) KUC3_09490 PF07977 FabA-like domain KUC3_09500 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 KUC3_09500 PF00132 Bacterial transferase hexapeptide (six repeats) KUC3_09510 PF02684 Lipid-A-disaccharide synthetase KUC3_09520 PF01351 Ribonuclease HII KUC3_09530 PF02811 PHP domain KUC3_09530 PF07733 Bacterial DNA polymerase III alpha NTPase domain KUC3_09530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KUC3_09530 PF14579 Helix-hairpin-helix motif KUC3_09530 PF01336 OB-fold nucleic acid binding domain KUC3_09540 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KUC3_09550 PF01171 PP-loop family KUC3_09550 PF11734 TilS substrate C-terminal domain KUC3_09550 PF09179 TilS substrate binding domain KUC3_09560 PF00990 Diguanylate cyclase, GGDEF domain KUC3_09570 PF00999 Sodium/hydrogen exchanger family KUC3_09570 PF02080 TrkA-C domain KUC3_09570 PF02254 TrkA-N domain KUC3_09590 PF14437 MafB19-like deaminase KUC3_09610 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUC3_09610 PF01464 Transglycosylase SLT domain KUC3_09620 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KUC3_09620 PF02769 AIR synthase related protein, C-terminal domain KUC3_09620 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal KUC3_09640 PF01713 Smr domain KUC3_09750 PF01584 CheW-like domain KUC3_09750 PF00072 Response regulator receiver domain KUC3_09760 PF01739 CheR methyltransferase, SAM binding domain KUC3_09760 PF03705 CheR methyltransferase, all-alpha domain KUC3_09770 PF00460 Flagella basal body rod protein KUC3_09780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KUC3_09780 PF00460 Flagella basal body rod protein KUC3_09790 PF13861 FlgD Tudor-like domain KUC3_09790 PF03963 Flagellar hook capping protein - N-terminal region KUC3_09790 PF13860 FlgD Ig-like domain KUC3_09800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KUC3_09800 PF07559 Flagellar basal body protein FlaE KUC3_09800 PF00460 Flagella basal body rod protein KUC3_09810 PF00460 Flagella basal body rod protein KUC3_09810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KUC3_09820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KUC3_09820 PF00460 Flagella basal body rod protein KUC3_09830 PF02107 Flagellar L-ring protein KUC3_09840 PF02119 Flagellar P-ring protein KUC3_09850 PF10135 Rod binding protein KUC3_09850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KUC3_09870 PF00669 Bacterial flagellin N-terminal helical region KUC3_09870 PF00669 Bacterial flagellin N-terminal helical region KUC3_09870 PF00700 Bacterial flagellin C-terminal helical region KUC3_09870 PF00700 Bacterial flagellin C-terminal helical region KUC3_09890 PF07196 Flagellin hook IN motif KUC3_09890 PF00700 Bacterial flagellin C-terminal helical region KUC3_09890 PF00669 Bacterial flagellin N-terminal helical region KUC3_09900 PF00700 Bacterial flagellin C-terminal helical region KUC3_09900 PF07196 Flagellin hook IN motif KUC3_09900 PF00669 Bacterial flagellin N-terminal helical region KUC3_09910 PF00669 Bacterial flagellin N-terminal helical region KUC3_09910 PF07196 Flagellin hook IN motif KUC3_09910 PF00700 Bacterial flagellin C-terminal helical region KUC3_09920 PF03646 FlaG protein KUC3_09930 PF07195 Flagellar hook-associated protein 2 C-terminus KUC3_09930 PF07196 Flagellin hook IN motif KUC3_09930 PF02465 Flagellar hook-associated protein 2 N-terminus KUC3_09940 PF02561 Flagellar protein FliS KUC3_09980 PF16363 GDP-mannose 4,6 dehydratase KUC3_10000 PF00483 Nucleotidyl transferase KUC3_10010 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KUC3_10020 PF00132 Bacterial transferase hexapeptide (six repeats) KUC3_10050 PF00535 Glycosyl transferase family 2 KUC3_10060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KUC3_10070 PF02719 Polysaccharide biosynthesis protein KUC3_10100 PF04991 LicD family KUC3_10110 PF08666 SAF domain KUC3_10110 PF03102 NeuB family KUC3_10130 PF02348 Cytidylyltransferase KUC3_10140 PF01467 Cytidylyltransferase-like KUC3_10150 PF00700 Bacterial flagellin C-terminal helical region KUC3_10150 PF00669 Bacterial flagellin N-terminal helical region KUC3_10160 PF06490 Flagellar regulatory protein FleQ KUC3_10160 PF00158 Sigma-54 interaction domain KUC3_10160 PF02954 Bacterial regulatory protein, Fis family KUC3_10170 PF13188 PAS domain KUC3_10170 PF00512 His Kinase A (phospho-acceptor) domain KUC3_10170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_10180 PF00158 Sigma-54 interaction domain KUC3_10180 PF02954 Bacterial regulatory protein, Fis family KUC3_10180 PF00072 Response regulator receiver domain KUC3_10190 PF02049 Flagellar hook-basal body complex protein FliE KUC3_10200 PF08345 Flagellar M-ring protein C-terminal KUC3_10200 PF01514 Secretory protein of YscJ/FliF family KUC3_10210 PF14842 FliG N-terminal domain KUC3_10210 PF01706 FliG C-terminal domain KUC3_10210 PF14841 FliG middle domain KUC3_10230 PF18269 T3SS EscN ATPase C-terminal domain KUC3_10230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KUC3_10270 PF02154 Flagellar motor switch protein FliM KUC3_10270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KUC3_10280 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KUC3_10290 PF04347 Flagellar biosynthesis protein, FliO KUC3_10300 PF00813 FliP family KUC3_10310 PF01313 Bacterial export proteins, family 3 KUC3_10320 PF01311 Bacterial export proteins, family 1 KUC3_10330 PF01312 FlhB HrpN YscU SpaS Family KUC3_10340 PF00771 FHIPEP family KUC3_10350 PF00448 SRP54-type protein, GTPase domain KUC3_10360 PF10609 NUBPL iron-transfer P-loop NTPase KUC3_10370 PF04545 Sigma-70, region 4 KUC3_10370 PF04542 Sigma-70 region 2 KUC3_10370 PF04539 Sigma-70 region 3 KUC3_10380 PF00072 Response regulator receiver domain KUC3_10390 PF04344 Chemotaxis phosphatase, CheZ KUC3_10400 PF01584 CheW-like domain KUC3_10400 PF01627 Hpt domain KUC3_10400 PF00072 Response regulator receiver domain KUC3_10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_10400 PF02895 Signal transducing histidine kinase, homodimeric domain KUC3_10410 PF00072 Response regulator receiver domain KUC3_10410 PF01339 CheB methylesterase KUC3_10420 PF13614 AAA domain KUC3_10440 PF01584 CheW-like domain KUC3_10460 PF04204 Homoserine O-succinyltransferase KUC3_10470 PF02310 B12 binding domain KUC3_10470 PF02607 B12 binding domain KUC3_10470 PF02574 Homocysteine S-methyltransferase KUC3_10470 PF02965 Vitamin B12 dependent methionine synthase, activation domain KUC3_10470 PF00809 Pterin binding enzyme KUC3_10480 PF02965 Vitamin B12 dependent methionine synthase, activation domain KUC3_10480 PF02574 Homocysteine S-methyltransferase KUC3_10480 PF00809 Pterin binding enzyme KUC3_10480 PF02607 B12 binding domain KUC3_10480 PF02310 B12 binding domain KUC3_10500 PF05987 Bacterial protein of unknown function (DUF898) KUC3_10520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_10520 PF00672 HAMP domain KUC3_10520 PF02743 Cache domain KUC3_10530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_10530 PF03466 LysR substrate binding domain KUC3_10540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_10540 PF03466 LysR substrate binding domain KUC3_10550 PF00484 Carbonic anhydrase KUC3_10560 PF01740 STAS domain KUC3_10560 PF00916 Sulfate permease family KUC3_10590 PF13977 BetI-type transcriptional repressor, C-terminal KUC3_10590 PF00440 Bacterial regulatory proteins, tetR family KUC3_10600 PF01431 Peptidase family M13 KUC3_10600 PF05649 Peptidase family M13 KUC3_10630 PF02272 DHHA1 domain KUC3_10630 PF01411 tRNA synthetases class II (A) KUC3_10630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KUC3_10640 PF02599 Global regulator protein family KUC3_10660 PF02436 Conserved carboxylase domain KUC3_10660 PF00364 Biotin-requiring enzyme KUC3_10660 PF00682 HMGL-like KUC3_10670 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit KUC3_10680 PF00005 ABC transporter KUC3_10690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KUC3_10690 PF00005 ABC transporter KUC3_10700 PF00528 Binding-protein-dependent transport system inner membrane component KUC3_10700 PF12911 N-terminal TM domain of oligopeptide transport permease C KUC3_10710 PF00528 Binding-protein-dependent transport system inner membrane component KUC3_10720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KUC3_10730 PF00158 Sigma-54 interaction domain KUC3_10730 PF02954 Bacterial regulatory protein, Fis family KUC3_10740 PF04012 PspA/IM30 family KUC3_10780 PF00351 Biopterin-dependent aromatic amino acid hydroxylase KUC3_10790 PF00158 Sigma-54 interaction domain KUC3_10790 PF18024 Helix-turn-helix domain KUC3_10810 PF02798 Glutathione S-transferase, N-terminal domain KUC3_10810 PF14497 Glutathione S-transferase, C-terminal domain KUC3_10820 PF01037 Lrp/AsnC ligand binding domain KUC3_10830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KUC3_10830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KUC3_10850 PF03301 Tryptophan 2,3-dioxygenase KUC3_10880 PF07715 TonB-dependent Receptor Plug Domain KUC3_10880 PF00593 TonB dependent receptor KUC3_10920 PF01618 MotA/TolQ/ExbB proton channel family KUC3_10930 PF01618 MotA/TolQ/ExbB proton channel family KUC3_10940 PF02472 Biopolymer transport protein ExbD/TolR KUC3_10950 PF03544 Gram-negative bacterial TonB protein C-terminal KUC3_10970 PF13718 GNAT acetyltransferase 2 KUC3_10970 PF17176 tRNA-binding domain KUC3_10970 PF05127 Helicase KUC3_10970 PF08351 Domain of unknown function (DUF1726) KUC3_11040 PF00583 Acetyltransferase (GNAT) family KUC3_11060 PF03466 LysR substrate binding domain KUC3_11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_11070 PF07690 Major Facilitator Superfamily KUC3_11080 PF00296 Luciferase-like monooxygenase KUC3_11090 PF00248 Aldo/keto reductase family KUC3_11100 PF08240 Alcohol dehydrogenase GroES-like domain KUC3_11100 PF00107 Zinc-binding dehydrogenase KUC3_11110 PF05230 MASE2 domain KUC3_11110 PF00990 Diguanylate cyclase, GGDEF domain KUC3_11120 PF00009 Elongation factor Tu GTP binding domain KUC3_11120 PF03144 Elongation factor Tu domain 2 KUC3_11120 PF16658 Class II release factor RF3, C-terminal domain KUC3_11130 PF05746 DALR anticodon binding domain KUC3_11130 PF03485 Arginyl tRNA synthetase N terminal domain KUC3_11130 PF00750 tRNA synthetases class I (R) KUC3_11150 PF01039 Carboxyl transferase domain KUC3_11160 PF00990 Diguanylate cyclase, GGDEF domain KUC3_11170 PF13411 MerR HTH family regulatory protein KUC3_11190 PF03466 LysR substrate binding domain KUC3_11190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_11200 PF02525 Flavodoxin-like fold KUC3_11230 PF00291 Pyridoxal-phosphate dependent enzyme KUC3_11260 PF04224 Protein of unknown function, DUF417 KUC3_11280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_11280 PF03466 LysR substrate binding domain KUC3_11290 PF05368 NmrA-like family KUC3_11310 PF00487 Fatty acid desaturase KUC3_11320 PF00970 Oxidoreductase FAD-binding domain KUC3_11320 PF00111 2Fe-2S iron-sulfur cluster binding domain KUC3_11320 PF00175 Oxidoreductase NAD-binding domain KUC3_11330 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KUC3_11350 PF00472 RF-1 domain KUC3_11350 PF03462 PCRF domain KUC3_11360 PF00152 tRNA synthetases class II (D, K and N) KUC3_11360 PF01336 OB-fold nucleic acid binding domain KUC3_11370 PF02558 Ketopantoate reductase PanE/ApbA KUC3_11370 PF08546 Ketopantoate reductase PanE/ApbA C terminal KUC3_11380 PF00849 RNA pseudouridylate synthase KUC3_11400 PF00675 Insulinase (Peptidase family M16) KUC3_11400 PF05193 Peptidase M16 inactive domain KUC3_11410 PF04262 Glutamate-cysteine ligase KUC3_11430 PF01546 Peptidase family M20/M25/M40 KUC3_11430 PF07687 Peptidase dimerisation domain KUC3_11440 PF09308 LuxQ, periplasmic KUC3_11440 PF00512 His Kinase A (phospho-acceptor) domain KUC3_11440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_11440 PF00072 Response regulator receiver domain KUC3_11460 PF00005 ABC transporter KUC3_11470 PF00005 ABC transporter KUC3_11470 PF02687 FtsX-like permease family KUC3_11470 PF12704 MacB-like periplasmic core domain KUC3_11480 PF02687 FtsX-like permease family KUC3_11480 PF00005 ABC transporter KUC3_11480 PF12704 MacB-like periplasmic core domain KUC3_11490 PF02954 Bacterial regulatory protein, Fis family KUC3_11490 PF00158 Sigma-54 interaction domain KUC3_11490 PF00072 Response regulator receiver domain KUC3_11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_11500 PF00672 HAMP domain KUC3_11510 PF00128 Alpha amylase, catalytic domain KUC3_11540 PF01713 Smr domain KUC3_11550 PF05175 Methyltransferase small domain KUC3_11560 PF01264 Chorismate synthase KUC3_11580 PF04293 SpoVR like protein KUC3_11590 PF04285 Protein of unknown function (DUF444) KUC3_11600 PF08298 PrkA AAA domain KUC3_11600 PF06798 PrkA serine protein kinase C-terminal domain KUC3_11610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KUC3_11610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KUC3_11620 PF00462 Glutaredoxin KUC3_11630 PF00593 TonB dependent receptor KUC3_11630 PF07715 TonB-dependent Receptor Plug Domain KUC3_11660 PF07715 TonB-dependent Receptor Plug Domain KUC3_11660 PF00593 TonB dependent receptor KUC3_11670 PF04324 BFD-like [2Fe-2S] binding domain KUC3_11680 PF10417 C-terminal domain of 1-Cys peroxiredoxin KUC3_11680 PF00578 AhpC/TSA family KUC3_11690 PF00929 Exonuclease KUC3_11710 PF00691 OmpA family KUC3_11710 PF18393 MotY N-terminal domain KUC3_11720 PF03009 Glycerophosphoryl diester phosphodiesterase family KUC3_11730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KUC3_11750 PF00313 'Cold-shock' DNA-binding domain KUC3_11760 PF04389 Peptidase family M28 KUC3_11760 PF02225 PA domain KUC3_11780 PF00730 HhH-GPD superfamily base excision DNA repair protein KUC3_11780 PF00633 Helix-hairpin-helix motif KUC3_11780 PF10576 Iron-sulfur binding domain of endonuclease III KUC3_11790 PF02508 Rnf-Nqr subunit, membrane protein KUC3_11800 PF04205 FMN-binding domain KUC3_11810 PF03116 NQR2, RnfD, RnfE family KUC3_11820 PF10531 SLBB domain KUC3_11820 PF13375 RnfC Barrel sandwich hybrid domain KUC3_11820 PF12838 4Fe-4S dicluster domain KUC3_11820 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit KUC3_11830 PF04060 Putative Fe-S cluster KUC3_11840 PF02508 Rnf-Nqr subunit, membrane protein KUC3_11850 PF01554 MatE KUC3_11860 PF12344 Ultra-violet resistance protein B KUC3_11860 PF02151 UvrB/uvrC motif KUC3_11860 PF04851 Type III restriction enzyme, res subunit KUC3_11860 PF17757 UvrB interaction domain KUC3_11860 PF00271 Helicase conserved C-terminal domain KUC3_11900 PF06508 Queuosine biosynthesis protein QueC KUC3_11910 PF04055 Radical SAM superfamily KUC3_11930 PF13537 Glutamine amidotransferase domain KUC3_11930 PF00733 Asparagine synthase KUC3_11980 PF02080 TrkA-C domain KUC3_11980 PF03600 Citrate transporter KUC3_11990 PF00009 Elongation factor Tu GTP binding domain KUC3_12000 PF00459 Inositol monophosphatase family KUC3_12020 PF01507 Phosphoadenosine phosphosulfate reductase family KUC3_12030 PF00474 Sodium:solute symporter family KUC3_12040 PF00990 Diguanylate cyclase, GGDEF domain KUC3_12040 PF00072 Response regulator receiver domain KUC3_12060 PF04542 Sigma-70 region 2 KUC3_12060 PF04545 Sigma-70, region 4 KUC3_12090 PF13519 von Willebrand factor type A domain KUC3_12100 PF00092 von Willebrand factor type A domain KUC3_12120 PF01882 Protein of unknown function DUF58 KUC3_12130 PF17863 AAA lid domain KUC3_12130 PF07726 ATPase family associated with various cellular activities (AAA) KUC3_12140 PF02803 Thiolase, C-terminal domain KUC3_12140 PF00108 Thiolase, N-terminal domain KUC3_12150 PF00378 Enoyl-CoA hydratase/isomerase KUC3_12150 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KUC3_12150 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KUC3_12170 PF00563 EAL domain KUC3_12170 PF00990 Diguanylate cyclase, GGDEF domain KUC3_12170 PF03707 Bacterial signalling protein N terminal repeat KUC3_12180 PF05193 Peptidase M16 inactive domain KUC3_12180 PF00675 Insulinase (Peptidase family M16) KUC3_12190 PF00300 Histidine phosphatase superfamily (branch 1) KUC3_12210 PF01595 Cyclin M transmembrane N-terminal domain KUC3_12210 PF00571 CBS domain KUC3_12210 PF03471 Transporter associated domain KUC3_12220 PF01578 Cytochrome C assembly protein KUC3_12230 PF02881 SRP54-type protein, helical bundle domain KUC3_12230 PF00448 SRP54-type protein, GTPase domain KUC3_12230 PF02978 Signal peptide binding domain KUC3_12310 PF00873 AcrB/AcrD/AcrF family KUC3_12320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KUC3_12330 PF00664 ABC transporter transmembrane region KUC3_12330 PF00005 ABC transporter KUC3_12340 PF00886 Ribosomal protein S16 KUC3_12350 PF05239 PRC-barrel domain KUC3_12350 PF01782 RimM N-terminal domain KUC3_12360 PF01746 tRNA (Guanine-1)-methyltransferase KUC3_12370 PF01245 Ribosomal protein L19 KUC3_12380 PF03458 UPF0126 domain KUC3_12400 PF00378 Enoyl-CoA hydratase/isomerase KUC3_12410 PF00793 DAHP synthetase I family KUC3_12420 PF02153 Prephenate dehydrogenase KUC3_12420 PF01817 Chorismate mutase type II KUC3_12430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_12430 PF00672 HAMP domain KUC3_12430 PF12729 Four helix bundle sensory module for signal transduction KUC3_12440 PF01817 Chorismate mutase type II KUC3_12440 PF00800 Prephenate dehydratase KUC3_12450 PF00072 Response regulator receiver domain KUC3_12460 PF01253 Translation initiation factor SUI1 KUC3_12480 PF00072 Response regulator receiver domain KUC3_12480 PF00486 Transcriptional regulatory protein, C terminal KUC3_12510 PF03707 Bacterial signalling protein N terminal repeat KUC3_12510 PF00990 Diguanylate cyclase, GGDEF domain KUC3_12510 PF00563 EAL domain KUC3_12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_12530 PF00512 His Kinase A (phospho-acceptor) domain KUC3_12550 PF00158 Sigma-54 interaction domain KUC3_12550 PF00072 Response regulator receiver domain KUC3_12570 PF00152 tRNA synthetases class II (D, K and N) KUC3_12570 PF01336 OB-fold nucleic acid binding domain KUC3_12570 PF02938 GAD domain KUC3_12580 PF00293 NUDIX domain KUC3_12590 PF02075 Crossover junction endodeoxyribonuclease RuvC KUC3_12600 PF01330 RuvA N terminal domain KUC3_12600 PF07499 RuvA, C-terminal domain KUC3_12610 PF05491 RuvB C-terminal winged helix domain KUC3_12610 PF05496 Holliday junction DNA helicase RuvB P-loop domain KUC3_12610 PF17864 RuvB AAA lid domain KUC3_12620 PF03061 Thioesterase superfamily KUC3_12630 PF01618 MotA/TolQ/ExbB proton channel family KUC3_12640 PF02472 Biopolymer transport protein ExbD/TolR KUC3_12660 PF07676 WD40-like Beta Propeller Repeat KUC3_12660 PF04052 TolB amino-terminal domain KUC3_12670 PF00691 OmpA family KUC3_12680 PF16331 TolA binding protein trimerisation KUC3_12680 PF13174 Tetratricopeptide repeat KUC3_12690 PF02445 Quinolinate synthetase A protein KUC3_12730 PF00440 Bacterial regulatory proteins, tetR family KUC3_12730 PF17754 MftR C-terminal domain KUC3_12740 PF13474 SnoaL-like domain KUC3_12770 PF00392 Bacterial regulatory proteins, gntR family KUC3_12780 PF03466 LysR substrate binding domain KUC3_12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_12820 PF07715 TonB-dependent Receptor Plug Domain KUC3_12820 PF00593 TonB dependent receptor KUC3_12880 PF01381 Helix-turn-helix KUC3_12890 PF01734 Patatin-like phospholipase KUC3_12910 PF00270 DEAD/DEAH box helicase KUC3_12910 PF00271 Helicase conserved C-terminal domain KUC3_12930 PF01118 Semialdehyde dehydrogenase, NAD binding domain KUC3_12930 PF02774 Semialdehyde dehydrogenase, dimerisation domain KUC3_12940 PF00106 short chain dehydrogenase KUC3_12950 PF03466 LysR substrate binding domain KUC3_12950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_12970 PF00873 AcrB/AcrD/AcrF family KUC3_12990 PF00440 Bacterial regulatory proteins, tetR family KUC3_12990 PF08361 MAATS-type transcriptional repressor, C-terminal region KUC3_13000 PF00593 TonB dependent receptor KUC3_13000 PF07715 TonB-dependent Receptor Plug Domain KUC3_13020 PF00873 AcrB/AcrD/AcrF family KUC3_13040 PF00990 Diguanylate cyclase, GGDEF domain KUC3_13060 PF02470 MlaD protein KUC3_13070 PF04403 Paraquat-inducible protein A KUC3_13090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_13090 PF03466 LysR substrate binding domain KUC3_13130 PF06719 AraC-type transcriptional regulator N-terminus KUC3_13130 PF12833 Helix-turn-helix domain KUC3_13140 PF01336 OB-fold nucleic acid binding domain KUC3_13140 PF00152 tRNA synthetases class II (D, K and N) KUC3_13160 PF01699 Sodium/calcium exchanger protein KUC3_13170 PF08443 RimK-like ATP-grasp domain KUC3_13170 PF18030 RimK PreATP-grasp domain KUC3_13210 PF00072 Response regulator receiver domain KUC3_13210 PF01339 CheB methylesterase KUC3_13220 PF03975 CheD chemotactic sensory transduction KUC3_13230 PF01739 CheR methyltransferase, SAM binding domain KUC3_13230 PF03705 CheR methyltransferase, all-alpha domain KUC3_13240 PF08447 PAS fold KUC3_13240 PF13426 PAS domain KUC3_13240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_13260 PF00202 Aminotransferase class-III KUC3_13270 PF06968 Biotin and Thiamin Synthesis associated domain KUC3_13270 PF04055 Radical SAM superfamily KUC3_13280 PF00155 Aminotransferase class I and II KUC3_13290 PF08241 Methyltransferase domain KUC3_13310 PF03575 Peptidase family S51 KUC3_13320 PF01451 Low molecular weight phosphotyrosine protein phosphatase KUC3_13330 PF01032 FecCD transport family KUC3_13340 PF00005 ABC transporter KUC3_13350 PF01474 Class-II DAHP synthetase family KUC3_13360 PF00990 Diguanylate cyclase, GGDEF domain KUC3_13360 PF17151 Periplasmic sensor domain KUC3_13410 PF13493 Domain of unknown function (DUF4118) KUC3_13410 PF00512 His Kinase A (phospho-acceptor) domain KUC3_13410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_13410 PF02702 Osmosensitive K+ channel His kinase sensor domain KUC3_13420 PF00486 Transcriptional regulatory protein, C terminal KUC3_13420 PF00072 Response regulator receiver domain KUC3_13430 PF02080 TrkA-C domain KUC3_13430 PF02254 TrkA-N domain KUC3_13440 PF02386 Cation transport protein KUC3_13460 PF00664 ABC transporter transmembrane region KUC3_13460 PF00005 ABC transporter KUC3_13470 PF06463 Molybdenum Cofactor Synthesis C KUC3_13470 PF04055 Radical SAM superfamily KUC3_13490 PF00486 Transcriptional regulatory protein, C terminal KUC3_13490 PF00072 Response regulator receiver domain KUC3_13500 PF00749 tRNA synthetases class I (E and Q), catalytic domain KUC3_13540 PF01207 Dihydrouridine synthase (Dus) KUC3_13550 PF01979 Amidohydrolase family KUC3_13560 PF01979 Amidohydrolase family KUC3_13590 PF13472 GDSL-like Lipase/Acylhydrolase family KUC3_13600 PF00005 ABC transporter KUC3_13620 PF01370 NAD dependent epimerase/dehydratase family KUC3_13620 PF08338 Domain of unknown function (DUF1731) KUC3_13630 PF02152 Dihydroneopterin aldolase KUC3_13640 PF01594 AI-2E family transporter KUC3_13650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_13660 PF00486 Transcriptional regulatory protein, C terminal KUC3_13660 PF00072 Response regulator receiver domain KUC3_13680 PF03795 YCII-related domain KUC3_13690 PF00290 Tryptophan synthase alpha chain KUC3_13700 PF00291 Pyridoxal-phosphate dependent enzyme KUC3_13710 PF00218 Indole-3-glycerol phosphate synthase KUC3_13710 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KUC3_13720 PF00591 Glycosyl transferase family, a/b domain KUC3_13720 PF02885 Glycosyl transferase family, helical bundle domain KUC3_13730 PF00117 Glutamine amidotransferase class-I KUC3_13740 PF04715 Anthranilate synthase component I, N terminal region KUC3_13740 PF00425 chorismate binding enzyme KUC3_13750 PF02811 PHP domain KUC3_13760 PF01300 Telomere recombination KUC3_13770 PF02616 Segregation and condensation protein ScpA KUC3_13780 PF04079 Segregation and condensation complex subunit ScpB KUC3_13790 PF00849 RNA pseudouridylate synthase KUC3_13790 PF01479 S4 domain KUC3_13810 PF00248 Aldo/keto reductase family KUC3_13820 PF07702 UTRA domain KUC3_13820 PF00392 Bacterial regulatory proteins, gntR family KUC3_13830 PF00005 ABC transporter KUC3_13850 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KUC3_13850 PF00326 Prolyl oligopeptidase family KUC3_13860 PF14602 Hexapeptide repeat of succinyl-transferase KUC3_13860 PF12464 Maltose acetyltransferase KUC3_13880 PF04286 Protein of unknown function (DUF445) KUC3_13910 PF05724 Thiopurine S-methyltransferase (TPMT) KUC3_13920 PF04355 SmpA / OmlA family KUC3_13930 PF02463 RecF/RecN/SMC N terminal domain KUC3_13940 PF00210 Ferritin-like domain KUC3_13950 PF01513 ATP-NAD kinase KUC3_13970 PF00465 Iron-containing alcohol dehydrogenase KUC3_14000 PF00561 alpha/beta hydrolase fold KUC3_14020 PF00593 TonB dependent receptor KUC3_14020 PF07715 TonB-dependent Receptor Plug Domain KUC3_14030 PF00072 Response regulator receiver domain KUC3_14030 PF00196 Bacterial regulatory proteins, luxR family KUC3_14040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_14040 PF00512 His Kinase A (phospho-acceptor) domain KUC3_14040 PF09308 LuxQ, periplasmic KUC3_14040 PF00072 Response regulator receiver domain KUC3_14050 PF00990 Diguanylate cyclase, GGDEF domain KUC3_14060 PF09308 LuxQ, periplasmic KUC3_14060 PF00072 Response regulator receiver domain KUC3_14060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_14060 PF00512 His Kinase A (phospho-acceptor) domain KUC3_14070 PF02652 L-lactate permease KUC3_14080 PF01025 GrpE KUC3_14090 PF00012 Hsp70 protein KUC3_14100 PF01556 DnaJ C terminal domain KUC3_14100 PF00226 DnaJ domain KUC3_14100 PF00684 DnaJ central domain KUC3_14110 PF01322 Cytochrome C' KUC3_14130 PF01872 RibD C-terminal domain KUC3_14150 PF00990 Diguanylate cyclase, GGDEF domain KUC3_14150 PF03707 Bacterial signalling protein N terminal repeat KUC3_14150 PF00563 EAL domain KUC3_14160 PF13193 AMP-binding enzyme C-terminal domain KUC3_14160 PF16177 Acetyl-coenzyme A synthetase N-terminus KUC3_14160 PF00501 AMP-binding enzyme KUC3_14180 PF01113 Dihydrodipicolinate reductase, N-terminus KUC3_14180 PF05173 Dihydrodipicolinate reductase, C-terminus KUC3_14190 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KUC3_14190 PF00117 Glutamine amidotransferase class-I KUC3_14200 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KUC3_14200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KUC3_14200 PF02142 MGS-like domain KUC3_14210 PF01272 Transcription elongation factor, GreA/GreB, C-term KUC3_14210 PF03449 Transcription elongation factor, N-terminal KUC3_14220 PF00672 HAMP domain KUC3_14220 PF12729 Four helix bundle sensory module for signal transduction KUC3_14220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_14250 PF00011 Hsp20/alpha crystallin family KUC3_14260 PF17151 Periplasmic sensor domain KUC3_14260 PF00990 Diguanylate cyclase, GGDEF domain KUC3_14270 PF00871 Acetokinase family KUC3_14280 PF01515 Phosphate acetyl/butaryl transferase KUC3_14280 PF07085 DRTGG domain KUC3_14290 PF01979 Amidohydrolase family KUC3_14300 PF00795 Carbon-nitrogen hydrolase KUC3_14310 PF03471 Transporter associated domain KUC3_14310 PF00571 CBS domain KUC3_14320 PF02130 Uncharacterized protein family UPF0054 KUC3_14330 PF02562 PhoH-like protein KUC3_14340 PF04055 Radical SAM superfamily KUC3_14340 PF00919 Uncharacterized protein family UPF0004 KUC3_14340 PF01938 TRAM domain KUC3_14350 PF01494 FAD binding domain KUC3_14370 PF00990 Diguanylate cyclase, GGDEF domain KUC3_14380 PF00873 AcrB/AcrD/AcrF family KUC3_14390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KUC3_14470 PF07715 TonB-dependent Receptor Plug Domain KUC3_14470 PF00593 TonB dependent receptor KUC3_14480 PF03061 Thioesterase superfamily KUC3_14490 PF01613 Flavin reductase like domain KUC3_14500 PF01638 HxlR-like helix-turn-helix KUC3_14530 PF01235 Sodium:alanine symporter family KUC3_14540 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KUC3_14550 PF06071 Protein of unknown function (DUF933) KUC3_14550 PF01926 50S ribosome-binding GTPase KUC3_14560 PF01195 Peptidyl-tRNA hydrolase KUC3_14570 PF14693 Ribosomal protein TL5, C-terminal domain KUC3_14570 PF01386 Ribosomal L25p family KUC3_14600 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KUC3_14600 PF14572 Phosphoribosyl synthetase-associated domain KUC3_14610 PF08544 GHMP kinases C terminal KUC3_14610 PF00288 GHMP kinases N terminal domain KUC3_14620 PF03550 Outer membrane lipoprotein LolB KUC3_14630 PF01488 Shikimate / quinate 5-dehydrogenase KUC3_14630 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KUC3_14630 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KUC3_14640 PF03462 PCRF domain KUC3_14640 PF00472 RF-1 domain KUC3_14650 PF13847 Methyltransferase domain KUC3_14650 PF17827 PrmC N-terminal domain KUC3_14660 PF11849 Domain of unknown function (DUF3369) KUC3_14670 PF04247 Invasion gene expression up-regulator, SirB KUC3_14680 PF00793 DAHP synthetase I family KUC3_14700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_14700 PF03466 LysR substrate binding domain KUC3_14720 PF04241 Protein of unknown function (DUF423) KUC3_14730 PF01728 FtsJ-like methyltransferase KUC3_14730 PF18125 RlmM ferredoxin-like domain KUC3_14740 PF00009 Elongation factor Tu GTP binding domain KUC3_14740 PF03144 Elongation factor Tu domain 2 KUC3_14740 PF03764 Elongation factor G, domain IV KUC3_14740 PF00679 Elongation factor G C-terminus KUC3_14740 PF14492 Elongation Factor G, domain II KUC3_14760 PF01471 Putative peptidoglycan binding domain KUC3_14760 PF03572 Peptidase family S41 KUC3_14760 PF17820 PDZ domain KUC3_14770 PF02560 Cyanate lyase C-terminal domain KUC3_14780 PF00069 Protein kinase domain KUC3_14780 PF03793 PASTA domain KUC3_14790 PF01226 Formate/nitrite transporter KUC3_14800 PF01841 Transglutaminase-like superfamily KUC3_14800 PF13559 Domain of unknown function (DUF4129) KUC3_14800 PF11992 Domain of unknown function (DUF3488) KUC3_14820 PF17863 AAA lid domain KUC3_14820 PF07726 ATPase family associated with various cellular activities (AAA) KUC3_14830 PF03925 SeqA protein C-terminal domain KUC3_14830 PF17206 SeqA protein N-terminal domain KUC3_14840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KUC3_14840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KUC3_14840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KUC3_14840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KUC3_14850 PF00343 Carbohydrate phosphorylase KUC3_14860 PF00990 Diguanylate cyclase, GGDEF domain KUC3_14860 PF03707 Bacterial signalling protein N terminal repeat KUC3_14860 PF00563 EAL domain KUC3_14870 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KUC3_14890 PF01906 Putative heavy-metal-binding KUC3_14910 PF03544 Gram-negative bacterial TonB protein C-terminal KUC3_14940 PF07687 Peptidase dimerisation domain KUC3_14940 PF01546 Peptidase family M20/M25/M40 KUC3_14950 PF03960 ArsC family KUC3_14990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KUC3_15000 PF04209 homogentisate 1,2-dioxygenase KUC3_15030 PF00091 Tubulin/FtsZ family, GTPase domain KUC3_15030 PF12327 FtsZ family, C-terminal domain KUC3_15060 PF03435 Saccharopine dehydrogenase NADP binding domain KUC3_15070 PF00990 Diguanylate cyclase, GGDEF domain KUC3_15080 PF03707 Bacterial signalling protein N terminal repeat KUC3_15080 PF00990 Diguanylate cyclase, GGDEF domain KUC3_15080 PF00563 EAL domain KUC3_15090 PF12706 Beta-lactamase superfamily domain KUC3_15100 PF18113 Rubredoxin binding C-terminal domain KUC3_15100 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_15120 PF00440 Bacterial regulatory proteins, tetR family KUC3_15130 PF03466 LysR substrate binding domain KUC3_15130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_15150 PF00171 Aldehyde dehydrogenase family KUC3_15190 PF00873 AcrB/AcrD/AcrF family KUC3_15210 PF02254 TrkA-N domain KUC3_15210 PF00999 Sodium/hydrogen exchanger family KUC3_15220 PF02525 Flavodoxin-like fold KUC3_15250 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KUC3_15260 PF01799 [2Fe-2S] binding domain KUC3_15260 PF00111 2Fe-2S iron-sulfur cluster binding domain KUC3_15270 PF01638 HxlR-like helix-turn-helix KUC3_15290 PF02525 Flavodoxin-like fold KUC3_15300 PF05230 MASE2 domain KUC3_15300 PF00990 Diguanylate cyclase, GGDEF domain KUC3_15320 PF01979 Amidohydrolase family KUC3_15330 PF00576 HIUase/Transthyretin family KUC3_15360 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KUC3_15360 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KUC3_15370 PF01799 [2Fe-2S] binding domain KUC3_15370 PF00111 2Fe-2S iron-sulfur cluster binding domain KUC3_15370 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KUC3_15370 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain KUC3_15380 PF00440 Bacterial regulatory proteins, tetR family KUC3_15380 PF08362 YcdC-like protein, C-terminal region KUC3_15410 PF00860 Permease family KUC3_15420 PF00962 Adenosine/AMP deaminase KUC3_15440 PF00990 Diguanylate cyclase, GGDEF domain KUC3_15440 PF03707 Bacterial signalling protein N terminal repeat KUC3_15440 PF00563 EAL domain KUC3_15450 PF00990 Diguanylate cyclase, GGDEF domain KUC3_15450 PF00072 Response regulator receiver domain KUC3_15460 PF00512 His Kinase A (phospho-acceptor) domain KUC3_15460 PF09308 LuxQ, periplasmic KUC3_15460 PF00072 Response regulator receiver domain KUC3_15460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_15480 PF07715 TonB-dependent Receptor Plug Domain KUC3_15480 PF00593 TonB dependent receptor KUC3_15490 PF00860 Permease family KUC3_15510 PF07687 Peptidase dimerisation domain KUC3_15510 PF01546 Peptidase family M20/M25/M40 KUC3_15520 PF00266 Aminotransferase class-V KUC3_15530 PF01925 Sulfite exporter TauE/SafE KUC3_15550 PF01425 Amidase KUC3_15620 PF03881 Fructosamine kinase KUC3_15630 PF03129 Anticodon binding domain KUC3_15630 PF02824 TGS domain KUC3_15630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KUC3_15630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KUC3_15640 PF00707 Translation initiation factor IF-3, C-terminal domain KUC3_15640 PF05198 Translation initiation factor IF-3, N-terminal domain KUC3_15650 PF01632 Ribosomal protein L35 KUC3_15660 PF00453 Ribosomal protein L20 KUC3_15670 PF01050 Mannose-6-phosphate isomerase KUC3_15670 PF00483 Nucleotidyl transferase KUC3_15680 PF02397 Bacterial sugar transferase KUC3_15700 PF02563 Polysaccharide biosynthesis/export protein KUC3_15700 PF10531 SLBB domain KUC3_15700 PF18412 Outer-membrane lipoprotein Wza C-terminal domain KUC3_15710 PF13614 AAA domain KUC3_15770 PF00563 EAL domain KUC3_15770 PF00990 Diguanylate cyclase, GGDEF domain KUC3_15770 PF13426 PAS domain KUC3_15810 PF00534 Glycosyl transferases group 1 KUC3_15810 PF13477 Glycosyl transferase 4-like KUC3_15830 PF13439 Glycosyltransferase Family 4 KUC3_15830 PF00534 Glycosyl transferases group 1 KUC3_15840 PF04230 Polysaccharide pyruvyl transferase KUC3_15870 PF13439 Glycosyltransferase Family 4 KUC3_15870 PF00534 Glycosyl transferases group 1 KUC3_15880 PF00535 Glycosyl transferase family 2 KUC3_15900 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KUC3_15900 PF01409 tRNA synthetases class II core domain (F) KUC3_15910 PF03484 tRNA synthetase B5 domain KUC3_15910 PF03147 Ferredoxin-fold anticodon binding domain KUC3_15910 PF01588 Putative tRNA binding domain KUC3_15910 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KUC3_15910 PF03483 B3/4 domain KUC3_15920 PF00216 Bacterial DNA-binding protein KUC3_15950 PF04073 Aminoacyl-tRNA editing domain KUC3_15960 PF01804 Penicillin amidase KUC3_15970 PF00933 Glycosyl hydrolase family 3 N terminal domain KUC3_15990 PF01923 Cobalamin adenosyltransferase KUC3_16010 PF17757 UvrB interaction domain KUC3_16010 PF00270 DEAD/DEAH box helicase KUC3_16010 PF02559 CarD-like/TRCF domain KUC3_16010 PF00271 Helicase conserved C-terminal domain KUC3_16010 PF03461 TRCF domain KUC3_16030 PF12704 MacB-like periplasmic core domain KUC3_16030 PF02687 FtsX-like permease family KUC3_16040 PF00156 Phosphoribosyl transferase domain KUC3_16050 PF00072 Response regulator receiver domain KUC3_16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_16050 PF08448 PAS fold KUC3_16050 PF00512 His Kinase A (phospho-acceptor) domain KUC3_16050 PF13188 PAS domain KUC3_16080 PF03372 Endonuclease/Exonuclease/phosphatase family KUC3_16190 PF07690 Major Facilitator Superfamily KUC3_16210 PF00483 Nucleotidyl transferase KUC3_16220 PF01156 Inosine-uridine preferring nucleoside hydrolase KUC3_16250 PF00682 HMGL-like KUC3_16260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KUC3_16260 PF00289 Biotin carboxylase, N-terminal domain KUC3_16260 PF02785 Biotin carboxylase C-terminal domain KUC3_16260 PF00364 Biotin-requiring enzyme KUC3_16260 PF18140 Propionyl-coenzyme A carboxylase BT domain KUC3_16270 PF00378 Enoyl-CoA hydratase/isomerase KUC3_16280 PF01039 Carboxyl transferase domain KUC3_16290 PF02770 Acyl-CoA dehydrogenase, middle domain KUC3_16290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUC3_16290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUC3_16300 PF13411 MerR HTH family regulatory protein KUC3_16310 PF00108 Thiolase, N-terminal domain KUC3_16310 PF02803 Thiolase, C-terminal domain KUC3_16330 PF00266 Aminotransferase class-V KUC3_16360 PF08411 Exonuclease C-terminal KUC3_16360 PF00929 Exonuclease KUC3_16370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KUC3_16370 PF00072 Response regulator receiver domain KUC3_16370 PF01627 Hpt domain KUC3_16370 PF00512 His Kinase A (phospho-acceptor) domain KUC3_16370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_16370 PF00672 HAMP domain KUC3_16380 PF01112 Asparaginase KUC3_16410 PF00270 DEAD/DEAH box helicase KUC3_16410 PF04408 Helicase associated domain (HA2) KUC3_16410 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold KUC3_16410 PF00271 Helicase conserved C-terminal domain KUC3_16410 PF11898 Domain of unknown function (DUF3418) KUC3_16440 PF17785 PUA-like domain KUC3_16440 PF10672 S-adenosylmethionine-dependent methyltransferase KUC3_16450 PF02801 Beta-ketoacyl synthase, C-terminal domain KUC3_16450 PF08240 Alcohol dehydrogenase GroES-like domain KUC3_16450 PF00698 Acyl transferase domain KUC3_16450 PF14765 Polyketide synthase dehydratase KUC3_16450 PF00109 Beta-ketoacyl synthase, N-terminal domain KUC3_16450 PF16197 Ketoacyl-synthetase C-terminal extension KUC3_16450 PF00550 Phosphopantetheine attachment site KUC3_16450 PF08659 KR domain KUC3_16460 PF00075 RNase H KUC3_16470 PF00929 Exonuclease KUC3_16490 PF00005 ABC transporter KUC3_16500 PF12704 MacB-like periplasmic core domain KUC3_16500 PF02687 FtsX-like permease family KUC3_16510 PF00375 Sodium:dicarboxylate symporter family KUC3_16530 PF04996 Succinylarginine dihydrolase KUC3_16550 PF08272 Topoisomerase I zinc-ribbon-like KUC3_16550 PF01131 DNA topoisomerase KUC3_16550 PF01396 Topoisomerase DNA binding C4 zinc finger KUC3_16550 PF01751 Toprim domain KUC3_16560 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) KUC3_16590 PF00356 Bacterial regulatory proteins, lacI family KUC3_16610 PF04820 Tryptophan halogenase KUC3_16630 PF01081 KDPG and KHG aldolase KUC3_16640 PF07690 Major Facilitator Superfamily KUC3_16650 PF13378 Enolase C-terminal domain-like KUC3_16650 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KUC3_16670 PF05721 Phytanoyl-CoA dioxygenase (PhyH) KUC3_16690 PF17992 Agarase CBM like domain KUC3_16690 PF02449 Beta-galactosidase KUC3_16720 PF16385 Domain of unknown function KUC3_16720 PF00884 Sulfatase KUC3_16740 PF04820 Tryptophan halogenase KUC3_16760 PF00722 Glycosyl hydrolases family 16 KUC3_16770 PF00884 Sulfatase KUC3_16790 PF17992 Agarase CBM like domain KUC3_16790 PF02449 Beta-galactosidase KUC3_16820 PF00107 Zinc-binding dehydrogenase KUC3_16820 PF08240 Alcohol dehydrogenase GroES-like domain KUC3_16850 PF00067 Cytochrome P450 KUC3_16860 PF00111 2Fe-2S iron-sulfur cluster binding domain KUC3_16870 PF14759 Reductase C-terminal KUC3_16870 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_16890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KUC3_16900 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KUC3_16910 PF03480 Bacterial extracellular solute-binding protein, family 7 KUC3_16920 PF00171 Aldehyde dehydrogenase family KUC3_16940 PF00107 Zinc-binding dehydrogenase KUC3_16940 PF08240 Alcohol dehydrogenase GroES-like domain KUC3_16950 PF13378 Enolase C-terminal domain-like KUC3_16950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KUC3_16960 PF17992 Agarase CBM like domain KUC3_16960 PF02449 Beta-galactosidase KUC3_16970 PF08450 SMP-30/Gluconolactonase/LRE-like region KUC3_16980 PF00083 Sugar (and other) transporter KUC3_16990 PF00294 pfkB family carbohydrate kinase KUC3_17020 PF02798 Glutathione S-transferase, N-terminal domain KUC3_17040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_17040 PF03466 LysR substrate binding domain KUC3_17050 PF16325 Peptidase family U32 C-terminal domain KUC3_17050 PF01136 Peptidase family U32 KUC3_17060 PF00037 4Fe-4S binding domain KUC3_17070 PF13673 Acetyltransferase (GNAT) domain KUC3_17090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KUC3_17100 PF00111 2Fe-2S iron-sulfur cluster binding domain KUC3_17100 PF01799 [2Fe-2S] binding domain KUC3_17120 PF00072 Response regulator receiver domain KUC3_17120 PF00486 Transcriptional regulatory protein, C terminal KUC3_17130 PF00672 HAMP domain KUC3_17130 PF00989 PAS fold KUC3_17130 PF00512 His Kinase A (phospho-acceptor) domain KUC3_17130 PF18698 Histidine kinase sensor domain KUC3_17130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_17160 PF10150 Ribonuclease E/G family KUC3_17160 PF12111 Polyribonucleotide phosphorylase C terminal KUC3_17160 PF00575 S1 RNA binding domain KUC3_17170 PF12111 Polyribonucleotide phosphorylase C terminal KUC3_17170 PF10150 Ribonuclease E/G family KUC3_17170 PF00575 S1 RNA binding domain KUC3_17180 PF12111 Polyribonucleotide phosphorylase C terminal KUC3_17180 PF10150 Ribonuclease E/G family KUC3_17180 PF00575 S1 RNA binding domain KUC3_17190 PF01479 S4 domain KUC3_17190 PF00849 RNA pseudouridylate synthase KUC3_17200 PF00849 RNA pseudouridylate synthase KUC3_17200 PF01479 S4 domain KUC3_17210 PF13419 Haloacid dehalogenase-like hydrolase KUC3_17230 PF02545 Maf-like protein KUC3_17240 PF02545 Maf-like protein KUC3_17250 PF02620 Large ribosomal RNA subunit accumulation protein YceD KUC3_17260 PF01783 Ribosomal L32p protein family KUC3_17270 PF02504 Fatty acid synthesis protein KUC3_17280 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KUC3_17280 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KUC3_17290 PF00698 Acyl transferase domain KUC3_17310 PF00550 Phosphopantetheine attachment site KUC3_17320 PF00109 Beta-ketoacyl synthase, N-terminal domain KUC3_17320 PF02801 Beta-ketoacyl synthase, C-terminal domain KUC3_17330 PF01063 Amino-transferase class IV KUC3_17340 PF02618 YceG-like family KUC3_17350 PF02223 Thymidylate kinase KUC3_17360 PF09115 DNA polymerase III, delta subunit, C terminal KUC3_17370 PF01026 TatD related DNase KUC3_17380 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KUC3_17380 PF01243 Pyridoxamine 5'-phosphate oxidase KUC3_17390 PF13460 NAD(P)H-binding KUC3_17440 PF00815 Histidinol dehydrogenase KUC3_17450 PF00356 Bacterial regulatory proteins, lacI family KUC3_17470 PF03328 HpcH/HpaI aldolase/citrate lyase family KUC3_17520 PF00474 Sodium:solute symporter family KUC3_17540 PF00593 TonB dependent receptor KUC3_17540 PF07715 TonB-dependent Receptor Plug Domain KUC3_17610 PF02810 SEC-C motif KUC3_17640 PF09335 SNARE associated Golgi protein KUC3_17650 PF01794 Ferric reductase like transmembrane component KUC3_17660 PF00174 Oxidoreductase molybdopterin binding domain KUC3_17680 PF01966 HD domain KUC3_17680 PF13286 Phosphohydrolase-associated domain KUC3_17700 PF00155 Aminotransferase class I and II KUC3_17730 PF00873 AcrB/AcrD/AcrF family KUC3_17740 PF00873 AcrB/AcrD/AcrF family KUC3_17750 PF13533 Biotin-lipoyl like KUC3_17760 PF02566 OsmC-like protein KUC3_17770 PF17783 CvfB-like winged helix domain KUC3_17770 PF13509 S1 domain KUC3_17780 PF03746 LamB/YcsF family KUC3_17790 PF02682 Carboxyltransferase domain, subdomain C and D KUC3_17800 PF02626 Carboxyltransferase domain, subdomain A and B KUC3_17810 PF01063 Amino-transferase class IV KUC3_17820 PF01475 Ferric uptake regulator family KUC3_17840 PF00258 Flavodoxin KUC3_17860 PF00561 alpha/beta hydrolase fold KUC3_17890 PF01012 Electron transfer flavoprotein domain KUC3_17900 PF00766 Electron transfer flavoprotein FAD-binding domain KUC3_17900 PF01012 Electron transfer flavoprotein domain KUC3_17920 PF13533 Biotin-lipoyl like KUC3_17930 PF00873 AcrB/AcrD/AcrF family KUC3_17950 PF07715 TonB-dependent Receptor Plug Domain KUC3_17950 PF00593 TonB dependent receptor KUC3_17960 PF01965 DJ-1/PfpI family KUC3_17960 PF12833 Helix-turn-helix domain KUC3_17970 PF12806 Acetyl-CoA dehydrogenase C-terminal like KUC3_17970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUC3_17970 PF02770 Acyl-CoA dehydrogenase, middle domain KUC3_17970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUC3_18000 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KUC3_18020 PF00672 HAMP domain KUC3_18020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_18040 PF00155 Aminotransferase class I and II KUC3_18070 PF01053 Cys/Met metabolism PLP-dependent enzyme KUC3_18090 PF02525 Flavodoxin-like fold KUC3_18100 PF00255 Glutathione peroxidase KUC3_18130 PF00378 Enoyl-CoA hydratase/isomerase KUC3_18150 PF02567 Phenazine biosynthesis-like protein KUC3_18390 PF03691 Uncharacterised protein family (UPF0167) KUC3_18430 PF02371 Transposase IS116/IS110/IS902 family KUC3_18430 PF01548 Transposase KUC3_18500 PF00291 Pyridoxal-phosphate dependent enzyme KUC3_18540 PF01554 MatE KUC3_18550 PF03454 MoeA C-terminal region (domain IV) KUC3_18550 PF00994 Probable molybdopterin binding domain KUC3_18550 PF03453 MoeA N-terminal region (domain I and II) KUC3_18560 PF13419 Haloacid dehalogenase-like hydrolase KUC3_18570 PF00128 Alpha amylase, catalytic domain KUC3_18600 PF00485 Phosphoribulokinase / Uridine kinase family KUC3_18610 PF08003 Protein of unknown function (DUF1698) KUC3_18620 PF13649 Methyltransferase domain KUC3_18630 PF00072 Response regulator receiver domain KUC3_18630 PF00196 Bacterial regulatory proteins, luxR family KUC3_18640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUC3_18640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUC3_18640 PF02770 Acyl-CoA dehydrogenase, middle domain KUC3_18640 PF09317 Domain of unknown function (DUF1974) KUC3_18660 PF00551 Formyl transferase KUC3_18670 PF02769 AIR synthase related protein, C-terminal domain KUC3_18670 PF00586 AIR synthase related protein, N-terminal domain KUC3_18690 PF00308 Bacterial dnaA protein KUC3_18720 PF03358 NADPH-dependent FMN reductase KUC3_18730 PF03960 ArsC family KUC3_18750 PF01435 Peptidase family M48 KUC3_18750 PF13181 Tetratricopeptide repeat KUC3_18760 PF01594 AI-2E family transporter KUC3_18770 PF03466 LysR substrate binding domain KUC3_18770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_18800 PF00578 AhpC/TSA family KUC3_18820 PF00701 Dihydrodipicolinate synthetase family KUC3_18830 PF06804 NlpB/DapX lipoprotein KUC3_18840 PF01259 SAICAR synthetase KUC3_18850 PF00892 EamA-like transporter family KUC3_18860 PF03707 Bacterial signalling protein N terminal repeat KUC3_18860 PF00563 EAL domain KUC3_18860 PF00990 Diguanylate cyclase, GGDEF domain KUC3_18870 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_18870 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KUC3_18890 PF00487 Fatty acid desaturase KUC3_18920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_18920 PF03466 LysR substrate binding domain KUC3_18940 PF00111 2Fe-2S iron-sulfur cluster binding domain KUC3_18950 PF00268 Ribonucleotide reductase, small chain KUC3_18960 PF00317 Ribonucleotide reductase, all-alpha domain KUC3_18960 PF02867 Ribonucleotide reductase, barrel domain KUC3_18960 PF03477 ATP cone domain KUC3_18980 PF00521 DNA gyrase/topoisomerase IV, subunit A KUC3_18980 PF03989 DNA gyrase C-terminal domain, beta-propeller KUC3_18990 PF00266 Aminotransferase class-V KUC3_19000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KUC3_19010 PF02224 Cytidylate kinase KUC3_19020 PF00575 S1 RNA binding domain KUC3_19030 PF00216 Bacterial DNA-binding protein KUC3_19050 PF06305 Lipopolysaccharide assembly protein A domain KUC3_19060 PF18073 Rubredoxin metal binding domain KUC3_19070 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KUC3_19080 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KUC3_19080 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KUC3_19090 PF01037 Lrp/AsnC ligand binding domain KUC3_19100 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KUC3_19100 PF01580 FtsK/SpoIIIE family KUC3_19100 PF09397 Ftsk gamma domain KUC3_19100 PF17854 FtsK alpha domain KUC3_19110 PF03548 Outer membrane lipoprotein carrier protein LolA KUC3_19120 PF00004 ATPase family associated with various cellular activities (AAA) KUC3_19120 PF16193 AAA C-terminal domain KUC3_19120 PF12002 MgsA AAA+ ATPase C terminal KUC3_19130 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KUC3_19140 PF02403 Seryl-tRNA synthetase N-terminal domain KUC3_19140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KUC3_19210 PF04358 DsrC like protein KUC3_19240 PF02635 DsrE/DsrF-like family KUC3_19250 PF01027 Inhibitor of apoptosis-promoting Bax1 KUC3_19290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_19290 PF03466 LysR substrate binding domain KUC3_19300 PF07681 DoxX KUC3_19310 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase KUC3_19320 PF03781 Sulfatase-modifying factor enzyme 1 KUC3_19320 PF12867 DinB superfamily KUC3_19340 PF02678 Pirin KUC3_19340 PF17954 Quercetinase C-terminal cupin domain KUC3_19350 PF00072 Response regulator receiver domain KUC3_19350 PF00196 Bacterial regulatory proteins, luxR family KUC3_19360 PF08459 UvrC Helix-hairpin-helix N-terminal KUC3_19360 PF01541 GIY-YIG catalytic domain KUC3_19360 PF02151 UvrB/uvrC motif KUC3_19370 PF01066 CDP-alcohol phosphatidyltransferase KUC3_19390 PF00563 EAL domain KUC3_19390 PF12792 CSS motif domain associated with EAL KUC3_19400 PF03942 DTW domain KUC3_19410 PF08534 Redoxin KUC3_19420 PF00581 Rhodanese-like domain KUC3_19430 PF02146 Sir2 family KUC3_19440 PF01810 LysE type translocator KUC3_19480 PF01734 Patatin-like phospholipase KUC3_19490 PF01171 PP-loop family KUC3_19500 PF00582 Universal stress protein family KUC3_19510 PF00027 Cyclic nucleotide-binding domain KUC3_19510 PF13545 Crp-like helix-turn-helix domain KUC3_19540 PF00403 Heavy-metal-associated domain KUC3_19560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KUC3_19560 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP KUC3_19590 PF00115 Cytochrome C and Quinol oxidase polypeptide I KUC3_19610 PF00210 Ferritin-like domain KUC3_19620 PF00210 Ferritin-like domain KUC3_19630 PF00999 Sodium/hydrogen exchanger family KUC3_19640 PF01645 Conserved region in glutamate synthase KUC3_19660 PF00582 Universal stress protein family KUC3_19670 PF01219 Prokaryotic diacylglycerol kinase KUC3_19690 PF00589 Phage integrase family KUC3_19690 PF02899 Phage integrase, N-terminal SAM-like domain KUC3_19710 PF00486 Transcriptional regulatory protein, C terminal KUC3_19710 PF00072 Response regulator receiver domain KUC3_19720 PF00672 HAMP domain KUC3_19720 PF00512 His Kinase A (phospho-acceptor) domain KUC3_19720 PF16750 Sensor domain of 2-component histidine kinase KUC3_19720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_19730 PF01717 Cobalamin-independent synthase, Catalytic domain KUC3_19730 PF08267 Cobalamin-independent synthase, N-terminal domain KUC3_19790 PF01261 Xylose isomerase-like TIM barrel KUC3_19810 PF13193 AMP-binding enzyme C-terminal domain KUC3_19810 PF00501 AMP-binding enzyme KUC3_19820 PF06276 Ferric iron reductase FhuF-like transporter KUC3_19820 PF04183 IucA / IucC family KUC3_19830 PF06276 Ferric iron reductase FhuF-like transporter KUC3_19830 PF04183 IucA / IucC family KUC3_19840 PF01554 MatE KUC3_19850 PF00593 TonB dependent receptor KUC3_19850 PF07715 TonB-dependent Receptor Plug Domain KUC3_19860 PF04244 Deoxyribodipyrimidine photo-lyase-related protein KUC3_19870 PF00875 DNA photolyase KUC3_19870 PF03441 FAD binding domain of DNA photolyase KUC3_19880 PF03441 FAD binding domain of DNA photolyase KUC3_19880 PF00875 DNA photolyase KUC3_19890 PF00875 DNA photolyase KUC3_19890 PF03441 FAD binding domain of DNA photolyase KUC3_19910 PF07977 FabA-like domain KUC3_19920 PF04957 Ribosome modulation factor KUC3_19940 PF12848 ABC transporter KUC3_19940 PF00005 ABC transporter KUC3_19940 PF16326 ABC transporter C-terminal domain KUC3_19960 PF10672 S-adenosylmethionine-dependent methyltransferase KUC3_19960 PF02926 THUMP domain KUC3_19960 PF01170 Putative RNA methylase family UPF0020 KUC3_19970 PF01180 Dihydroorotate dehydrogenase KUC3_19980 PF05088 Bacterial NAD-glutamate dehydrogenase KUC3_20010 PF07044 Protein of unknown function (DUF1329) KUC3_20040 PF17432 Domain of unknown function (DUF3458_C) ARM repeats KUC3_20040 PF11940 Domain of unknown function (DUF3458) Ig-like fold KUC3_20040 PF01433 Peptidase family M1 domain KUC3_20050 PF03553 Na+/H+ antiporter family KUC3_20060 PF00209 Sodium:neurotransmitter symporter family KUC3_20070 PF17804 Tail specific protease N-terminal domain KUC3_20070 PF11818 C-terminal domain of tail specific protease (DUF3340) KUC3_20070 PF03572 Peptidase family S41 KUC3_20070 PF00595 PDZ domain KUC3_20080 PF04352 ProQ/FINO family KUC3_20080 PF17516 ProQ C-terminal domain KUC3_20100 PF13185 GAF domain KUC3_20120 PF00266 Aminotransferase class-V KUC3_20130 PF00132 Bacterial transferase hexapeptide (six repeats) KUC3_20150 PF00069 Protein kinase domain KUC3_20160 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ KUC3_20170 PF00364 Biotin-requiring enzyme KUC3_20170 PF02817 e3 binding domain KUC3_20170 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KUC3_20180 PF02779 Transketolase, pyrimidine binding domain KUC3_20180 PF02780 Transketolase, C-terminal domain KUC3_20190 PF00676 Dehydrogenase E1 component KUC3_20200 PF00082 Subtilase family KUC3_20200 PF13860 FlgD Ig-like domain KUC3_20200 PF05922 Peptidase inhibitor I9 KUC3_20200 PF02225 PA domain KUC3_20210 PF02646 RmuC family KUC3_20230 PF04715 Anthranilate synthase component I, N terminal region KUC3_20230 PF00425 chorismate binding enzyme KUC3_20240 PF00293 NUDIX domain KUC3_20250 PF03315 Serine dehydratase beta chain KUC3_20250 PF03313 Serine dehydratase alpha chain KUC3_20260 PF03466 LysR substrate binding domain KUC3_20260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_20270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_20300 PF03466 LysR substrate binding domain KUC3_20300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_20310 PF01144 Coenzyme A transferase KUC3_20320 PF01144 Coenzyme A transferase KUC3_20330 PF00271 Helicase conserved C-terminal domain KUC3_20330 PF00270 DEAD/DEAH box helicase KUC3_20350 PF17773 UPF0176 acylphosphatase like domain KUC3_20350 PF00581 Rhodanese-like domain KUC3_20380 PF06719 AraC-type transcriptional regulator N-terminus KUC3_20380 PF12833 Helix-turn-helix domain KUC3_20390 PF12146 Serine aminopeptidase, S33 KUC3_20410 PF00365 Phosphofructokinase KUC3_20430 PF00072 Response regulator receiver domain KUC3_20430 PF04397 LytTr DNA-binding domain KUC3_20440 PF06580 Histidine kinase KUC3_20440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_20440 PF07694 5TMR of 5TMR-LYT KUC3_20500 PF04245 37-kD nucleoid-associated bacterial protein KUC3_20510 PF07208 Protein of unknown function (DUF1414) KUC3_20520 PF11893 Domain of unknown function (DUF3413) KUC3_20520 PF00884 Sulfatase KUC3_20550 PF00378 Enoyl-CoA hydratase/isomerase KUC3_20560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUC3_20560 PF02770 Acyl-CoA dehydrogenase, middle domain KUC3_20560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUC3_20580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KUC3_20580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KUC3_20590 PF00255 Glutathione peroxidase KUC3_20600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KUC3_20600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KUC3_20610 PF13847 Methyltransferase domain KUC3_20620 PF01784 NIF3 (NGG1p interacting factor 3) KUC3_20650 PF01343 Peptidase family S49 KUC3_20650 PF08496 Peptidase family S49 N-terminal KUC3_20660 PF01804 Penicillin amidase KUC3_20670 PF12262 Bacterial virulence factor lipase N-terminal KUC3_20680 PF00106 short chain dehydrogenase KUC3_20690 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain KUC3_20690 PF00749 tRNA synthetases class I (E and Q), catalytic domain KUC3_20700 PF00356 Bacterial regulatory proteins, lacI family KUC3_20710 PF00128 Alpha amylase, catalytic domain KUC3_20710 PF00686 Starch binding domain KUC3_20730 PF00128 Alpha amylase, catalytic domain KUC3_20730 PF10438 Cyclo-malto-dextrinase C-terminal domain KUC3_20730 PF09087 Cyclomaltodextrinase, N-terminal KUC3_20740 PF00128 Alpha amylase, catalytic domain KUC3_20740 PF02903 Alpha amylase, N-terminal ig-like domain KUC3_20740 PF16657 Maltogenic Amylase, C-terminal domain KUC3_20750 PF00593 TonB dependent receptor KUC3_20750 PF07715 TonB-dependent Receptor Plug Domain KUC3_20780 PF01734 Patatin-like phospholipase KUC3_20790 PF18494 Pullulanase Ins domain KUC3_20790 PF03714 Bacterial pullanase-associated domain KUC3_20790 PF11852 Domain of unknown function (DUF3372) KUC3_20790 PF17967 Pullulanase N2 domain KUC3_20790 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KUC3_20810 PF04820 Tryptophan halogenase KUC3_20820 PF04820 Tryptophan halogenase KUC3_20870 PF02629 CoA binding domain KUC3_20870 PF00549 CoA-ligase KUC3_20880 PF00549 CoA-ligase KUC3_20880 PF08442 ATP-grasp domain KUC3_20890 PF02817 e3 binding domain KUC3_20890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KUC3_20890 PF00364 Biotin-requiring enzyme KUC3_20900 PF00676 Dehydrogenase E1 component KUC3_20900 PF16870 2-oxoglutarate dehydrogenase C-terminal KUC3_20900 PF02779 Transketolase, pyrimidine binding domain KUC3_20900 PF16078 2-oxoglutarate dehydrogenase N-terminus KUC3_20910 PF13085 2Fe-2S iron-sulfur cluster binding domain KUC3_20920 PF02910 Fumarate reductase flavoprotein C-term KUC3_20920 PF00890 FAD binding domain KUC3_20930 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KUC3_20940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KUC3_20950 PF00285 Citrate synthase, C-terminal domain KUC3_20980 PF02678 Pirin KUC3_20980 PF05726 Pirin C-terminal cupin domain KUC3_20990 PF13409 Glutathione S-transferase, N-terminal domain KUC3_21000 PF01266 FAD dependent oxidoreductase KUC3_21010 PF00899 ThiF family KUC3_21050 PF18693 TRAM domain KUC3_21050 PF00919 Uncharacterized protein family UPF0004 KUC3_21050 PF04055 Radical SAM superfamily KUC3_21060 PF00106 short chain dehydrogenase KUC3_21070 PF02348 Cytidylyltransferase KUC3_21080 PF03966 Trm112p-like protein KUC3_21090 PF02606 Tetraacyldisaccharide-1-P 4'-kinase KUC3_21100 PF00664 ABC transporter transmembrane region KUC3_21100 PF00005 ABC transporter KUC3_21110 PF00753 Metallo-beta-lactamase superfamily KUC3_21110 PF03772 Competence protein KUC3_21130 PF03120 NAD-dependent DNA ligase OB-fold domain KUC3_21130 PF01653 NAD-dependent DNA ligase adenylation domain KUC3_21130 PF12826 Helix-hairpin-helix motif KUC3_21130 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KUC3_21130 PF00533 BRCA1 C Terminus (BRCT) domain KUC3_21140 PF04354 ZipA, C-terminal FtsZ-binding domain KUC3_21150 PF02463 RecF/RecN/SMC N terminal domain KUC3_21150 PF06470 SMC proteins Flexible Hinge Domain KUC3_21180 PF13181 Tetratricopeptide repeat KUC3_21180 PF07719 Tetratricopeptide repeat KUC3_21240 PF03544 Gram-negative bacterial TonB protein C-terminal KUC3_21340 PF13649 Methyltransferase domain KUC3_21540 PF03725 3' exoribonuclease family, domain 2 KUC3_21540 PF01138 3' exoribonuclease family, domain 1 KUC3_21540 PF00013 KH domain KUC3_21540 PF00575 S1 RNA binding domain KUC3_21540 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KUC3_21570 PF00171 Aldehyde dehydrogenase family KUC3_21580 PF00696 Amino acid kinase family KUC3_21590 PF00474 Sodium:solute symporter family KUC3_21650 PF02142 MGS-like domain KUC3_21650 PF00781 Diacylglycerol kinase catalytic domain KUC3_21660 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KUC3_21660 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KUC3_21680 PF01679 Proteolipid membrane potential modulator KUC3_21690 PF03707 Bacterial signalling protein N terminal repeat KUC3_21690 PF00990 Diguanylate cyclase, GGDEF domain KUC3_21690 PF00563 EAL domain KUC3_21700 PF00990 Diguanylate cyclase, GGDEF domain KUC3_21710 PF03840 Preprotein translocase SecG subunit KUC3_21720 PF00121 Triosephosphate isomerase KUC3_21730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KUC3_21730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KUC3_21730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KUC3_21730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KUC3_21740 PF00809 Pterin binding enzyme KUC3_21750 PF00004 ATPase family associated with various cellular activities (AAA) KUC3_21750 PF17862 AAA+ lid domain KUC3_21750 PF01434 Peptidase family M41 KUC3_21750 PF06480 FtsH Extracellular KUC3_21760 PF01728 FtsJ-like methyltransferase KUC3_21770 PF01985 CRS1 / YhbY (CRM) domain KUC3_21780 PF00106 short chain dehydrogenase KUC3_21800 PF05362 Lon protease (S16) C-terminal proteolytic domain KUC3_21800 PF13654 AAA domain KUC3_21820 PF00133 tRNA synthetases class I (I, L, M and V) KUC3_21820 PF13603 Leucyl-tRNA synthetase, Domain 2 KUC3_21820 PF08264 Anticodon-binding domain of tRNA KUC3_21830 PF04390 Lipopolysaccharide-assembly KUC3_21840 PF14840 Processivity clamp loader gamma complex DNA pol III C-term KUC3_21840 PF06144 DNA polymerase III, delta subunit KUC3_21850 PF01467 Cytidylyltransferase-like KUC3_21870 PF02590 Predicted SPOUT methyltransferase KUC3_21880 PF00905 Penicillin binding protein transpeptidase domain KUC3_21880 PF03717 Penicillin-binding Protein dimerisation domain KUC3_21890 PF01098 Cell cycle protein KUC3_21900 PF03330 Lytic transglycolase KUC3_21900 PF05036 Sporulation related domain KUC3_21910 PF07943 Penicillin-binding protein 5, C-terminal domain KUC3_21910 PF00768 D-alanyl-D-alanine carboxypeptidase KUC3_21920 PF04359 Protein of unknown function (DUF493) KUC3_21930 PF03099 Biotin/lipoate A/B protein ligase family KUC3_21940 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KUC3_21940 PF04055 Radical SAM superfamily KUC3_21950 PF00710 Asparaginase, N-terminal KUC3_21950 PF17763 Glutaminase/Asparaginase C-terminal domain KUC3_21990 PF00881 Nitroreductase family KUC3_22020 PF01343 Peptidase family S49 KUC3_22030 PF04217 Protein of unknown function, DUF412 KUC3_22040 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_22050 PF03588 Leucyl/phenylalanyl-tRNA protein transferase KUC3_22060 PF04376 Arginine-tRNA-protein transferase, N terminus KUC3_22060 PF04377 Arginine-tRNA-protein transferase, C terminus KUC3_22070 PF01176 Translation initiation factor 1A / IF-1 KUC3_22080 PF10431 C-terminal, D2-small domain, of ClpB protein KUC3_22080 PF17871 AAA lid domain KUC3_22080 PF07724 AAA domain (Cdc48 subfamily) KUC3_22080 PF00004 ATPase family associated with various cellular activities (AAA) KUC3_22080 PF02861 Clp amino terminal domain, pathogenicity island component KUC3_22090 PF02617 ATP-dependent Clp protease adaptor protein ClpS KUC3_22100 PF00313 'Cold-shock' DNA-binding domain KUC3_22110 PF03971 Monomeric isocitrate dehydrogenase KUC3_22120 PF00849 RNA pseudouridylate synthase KUC3_22140 PF04356 Protein of unknown function (DUF489) KUC3_22150 PF08328 Adenylosuccinate lyase C-terminal KUC3_22150 PF00206 Lyase KUC3_22170 PF08007 Cupin superfamily protein KUC3_22210 PF01799 [2Fe-2S] binding domain KUC3_22210 PF00111 2Fe-2S iron-sulfur cluster binding domain KUC3_22220 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KUC3_22240 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KUC3_22240 PF00391 PEP-utilising enzyme, mobile domain KUC3_22240 PF02896 PEP-utilising enzyme, TIM barrel domain KUC3_22250 PF03618 Kinase/pyrophosphorylase KUC3_22270 PF13181 Tetratricopeptide repeat KUC3_22280 PF07715 TonB-dependent Receptor Plug Domain KUC3_22280 PF00593 TonB dependent receptor KUC3_22290 PF02028 BCCT, betaine/carnitine/choline family transporter KUC3_22310 PF03658 RnfH family Ubiquitin KUC3_22320 PF03364 Polyketide cyclase / dehydrase and lipid transport KUC3_22330 PF01668 SmpB protein KUC3_22340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KUC3_22350 PF00990 Diguanylate cyclase, GGDEF domain KUC3_22350 PF17158 Membrane-associated sensor, integral membrane domain KUC3_22370 PF00005 ABC transporter KUC3_22400 PF00593 TonB dependent receptor KUC3_22400 PF07715 TonB-dependent Receptor Plug Domain KUC3_22420 PF02525 Flavodoxin-like fold KUC3_22430 PF03466 LysR substrate binding domain KUC3_22430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_22440 PF00561 alpha/beta hydrolase fold KUC3_22490 PF14765 Polyketide synthase dehydratase KUC3_22490 PF08990 Erythronolide synthase docking KUC3_22490 PF08659 KR domain KUC3_22490 PF02801 Beta-ketoacyl synthase, C-terminal domain KUC3_22490 PF08240 Alcohol dehydrogenase GroES-like domain KUC3_22490 PF00109 Beta-ketoacyl synthase, N-terminal domain KUC3_22490 PF16197 Ketoacyl-synthetase C-terminal extension KUC3_22490 PF00698 Acyl transferase domain KUC3_22490 PF00550 Phosphopantetheine attachment site KUC3_22490 PF09277 Erythronolide synthase, docking KUC3_22510 PF01066 CDP-alcohol phosphatidyltransferase KUC3_22520 PF00005 ABC transporter KUC3_22530 PF00528 Binding-protein-dependent transport system inner membrane component KUC3_22540 PF13416 Bacterial extracellular solute-binding protein KUC3_22550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KUC3_22550 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_22560 PF07715 TonB-dependent Receptor Plug Domain KUC3_22560 PF00593 TonB dependent receptor KUC3_22590 PF04055 Radical SAM superfamily KUC3_22590 PF11842 Domain of unknown function (DUF3362) KUC3_22590 PF08497 Radical SAM N-terminal KUC3_22680 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_22680 PF13192 Thioredoxin domain KUC3_22690 PF00578 AhpC/TSA family KUC3_22690 PF10417 C-terminal domain of 1-Cys peroxiredoxin KUC3_22740 PF00795 Carbon-nitrogen hydrolase KUC3_22740 PF00583 Acetyltransferase (GNAT) family KUC3_22760 PF00849 RNA pseudouridylate synthase KUC3_22760 PF01479 S4 domain KUC3_22770 PF03707 Bacterial signalling protein N terminal repeat KUC3_22770 PF00990 Diguanylate cyclase, GGDEF domain KUC3_22770 PF00563 EAL domain KUC3_22770 PF00990 Diguanylate cyclase, GGDEF domain KUC3_22770 PF03707 Bacterial signalling protein N terminal repeat KUC3_22770 PF00563 EAL domain KUC3_22780 PF00312 Ribosomal protein S15 KUC3_22800 PF09157 Pseudouridine synthase II TruB, C-terminal KUC3_22800 PF16198 tRNA pseudouridylate synthase B C-terminal domain KUC3_22800 PF01509 TruB family pseudouridylate synthase (N terminal domain) KUC3_22810 PF02033 Ribosome-binding factor A KUC3_22820 PF08364 Bacterial translation initiation factor IF-2 associated region KUC3_22820 PF00009 Elongation factor Tu GTP binding domain KUC3_22820 PF11987 Translation-initiation factor 2 KUC3_22820 PF04760 Translation initiation factor IF-2, N-terminal region KUC3_22830 PF13184 NusA-like KH domain KUC3_22830 PF08529 NusA N-terminal domain KUC3_22830 PF00575 S1 RNA binding domain KUC3_22840 PF02576 RimP N-terminal domain KUC3_22840 PF17384 RimP C-terminal SH3 domain KUC3_22850 PF00072 Response regulator receiver domain KUC3_22860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_22860 PF00512 His Kinase A (phospho-acceptor) domain KUC3_22860 PF01627 Hpt domain KUC3_22860 PF00072 Response regulator receiver domain KUC3_22910 PF00672 HAMP domain KUC3_22910 PF00512 His Kinase A (phospho-acceptor) domain KUC3_22910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_22920 PF00072 Response regulator receiver domain KUC3_22920 PF00486 Transcriptional regulatory protein, C terminal KUC3_22930 PF01329 Pterin 4 alpha carbinolamine dehydratase KUC3_22940 PF00593 TonB dependent receptor KUC3_22940 PF07715 TonB-dependent Receptor Plug Domain KUC3_22950 PF00924 Mechanosensitive ion channel KUC3_22970 PF01575 MaoC like domain KUC3_22980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_22980 PF03466 LysR substrate binding domain KUC3_23070 PF00701 Dihydrodipicolinate synthetase family KUC3_23130 PF00561 alpha/beta hydrolase fold KUC3_23140 PF02770 Acyl-CoA dehydrogenase, middle domain KUC3_23140 PF12806 Acetyl-CoA dehydrogenase C-terminal like KUC3_23140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUC3_23140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUC3_23150 PF02803 Thiolase, C-terminal domain KUC3_23150 PF00108 Thiolase, N-terminal domain KUC3_23160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KUC3_23160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KUC3_23160 PF00378 Enoyl-CoA hydratase/isomerase KUC3_23170 PF00561 alpha/beta hydrolase fold KUC3_23200 PF13426 PAS domain KUC3_23200 PF08447 PAS fold KUC3_23200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_23210 PF00128 Alpha amylase, catalytic domain KUC3_23220 PF00107 Zinc-binding dehydrogenase KUC3_23220 PF08240 Alcohol dehydrogenase GroES-like domain KUC3_23240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUC3_23240 PF02770 Acyl-CoA dehydrogenase, middle domain KUC3_23240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUC3_23260 PF07715 TonB-dependent Receptor Plug Domain KUC3_23260 PF00593 TonB dependent receptor KUC3_23300 PF06969 HemN C-terminal domain KUC3_23300 PF04055 Radical SAM superfamily KUC3_23310 PF03459 TOBE domain KUC3_23310 PF00005 ABC transporter KUC3_23320 PF00528 Binding-protein-dependent transport system inner membrane component KUC3_23340 PF02391 MoaE protein KUC3_23350 PF02597 ThiS family KUC3_23360 PF01967 MoaC family KUC3_23370 PF00994 Probable molybdopterin binding domain KUC3_23380 PF00899 ThiF family KUC3_23420 PF00155 Aminotransferase class I and II KUC3_23430 PF03435 Saccharopine dehydrogenase NADP binding domain KUC3_23450 PF00175 Oxidoreductase NAD-binding domain KUC3_23450 PF00042 Globin KUC3_23450 PF00970 Oxidoreductase FAD-binding domain KUC3_23470 PF00158 Sigma-54 interaction domain KUC3_23470 PF01590 GAF domain KUC3_23510 PF01810 LysE type translocator KUC3_23520 PF00155 Aminotransferase class I and II KUC3_23520 PF00392 Bacterial regulatory proteins, gntR family KUC3_23550 PF13538 UvrD-like helicase C-terminal domain KUC3_23560 PF00580 UvrD/REP helicase N-terminal domain KUC3_23560 PF13361 UvrD-like helicase C-terminal domain KUC3_23560 PF12705 PD-(D/E)XK nuclease superfamily KUC3_23570 PF17946 RecC C-terminal domain KUC3_23590 PF00501 AMP-binding enzyme KUC3_23600 PF00563 EAL domain KUC3_23600 PF00990 Diguanylate cyclase, GGDEF domain KUC3_23600 PF03707 Bacterial signalling protein N terminal repeat KUC3_23610 PF17770 Ribonuclease J C-terminal domain KUC3_23610 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KUC3_23610 PF12706 Beta-lactamase superfamily domain KUC3_23630 PF03466 LysR substrate binding domain KUC3_23630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_23670 PF01022 Bacterial regulatory protein, arsR family KUC3_23690 PF03466 LysR substrate binding domain KUC3_23690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_23700 PF06055 Exopolysaccharide synthesis, ExoD KUC3_23710 PF00158 Sigma-54 interaction domain KUC3_23710 PF00072 Response regulator receiver domain KUC3_23710 PF02954 Bacterial regulatory protein, Fis family KUC3_23730 PF00360 Phytochrome region KUC3_23730 PF00512 His Kinase A (phospho-acceptor) domain KUC3_23730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_23730 PF08446 PAS fold KUC3_23730 PF01590 GAF domain KUC3_23740 PF00072 Response regulator receiver domain KUC3_23750 PF00512 His Kinase A (phospho-acceptor) domain KUC3_23750 PF09308 LuxQ, periplasmic KUC3_23750 PF00072 Response regulator receiver domain KUC3_23750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_23820 PF07043 Protein of unknown function (DUF1328) KUC3_23860 PF07023 Protein of unknown function (DUF1315) KUC3_23880 PF01235 Sodium:alanine symporter family KUC3_23890 PF18027 Cytosolic carboxypeptidase N-terminal domain KUC3_23890 PF00246 Zinc carboxypeptidase KUC3_23900 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KUC3_23900 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KUC3_23920 PF01641 SelR domain KUC3_23930 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KUC3_23930 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KUC3_23940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KUC3_23940 PF00128 Alpha amylase, catalytic domain KUC3_23950 PF00128 Alpha amylase, catalytic domain KUC3_23950 PF02806 Alpha amylase, C-terminal all-beta domain KUC3_23950 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KUC3_23960 PF02446 4-alpha-glucanotransferase KUC3_23970 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KUC3_23970 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KUC3_23980 PF01263 Aldose 1-epimerase KUC3_23990 PF01081 KDPG and KHG aldolase KUC3_24000 PF02685 Glucokinase KUC3_24010 PF00920 Dehydratase family KUC3_24020 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KUC3_24030 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KUC3_24030 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KUC3_24040 PF01418 Helix-turn-helix domain, rpiR family KUC3_24040 PF01380 SIS domain KUC3_24050 PF00224 Pyruvate kinase, barrel domain KUC3_24050 PF02887 Pyruvate kinase, alpha/beta domain KUC3_24110 PF00512 His Kinase A (phospho-acceptor) domain KUC3_24110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_24110 PF00072 Response regulator receiver domain KUC3_24110 PF09456 RcsC Alpha-Beta-Loop (ABL) KUC3_24140 PF04231 Endonuclease I KUC3_24150 PF11838 ERAP1-like C-terminal domain KUC3_24150 PF01433 Peptidase family M1 domain KUC3_24160 PF02743 Cache domain KUC3_24160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_24160 PF00672 HAMP domain KUC3_24200 PF03466 LysR substrate binding domain KUC3_24200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_24220 PF00465 Iron-containing alcohol dehydrogenase KUC3_24230 PF00563 EAL domain KUC3_24230 PF00990 Diguanylate cyclase, GGDEF domain KUC3_24230 PF08448 PAS fold KUC3_24230 PF08447 PAS fold KUC3_24240 PF00881 Nitroreductase family KUC3_24250 PF00199 Catalase KUC3_24250 PF06628 Catalase-related immune-responsive KUC3_24260 PF11849 Domain of unknown function (DUF3369) KUC3_24270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_24270 PF00512 His Kinase A (phospho-acceptor) domain KUC3_24270 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUC3_24280 PF01063 Amino-transferase class IV KUC3_24340 PF00881 Nitroreductase family KUC3_24380 PF01145 SPFH domain / Band 7 family KUC3_24440 PF03358 NADPH-dependent FMN reductase KUC3_24450 PF05726 Pirin C-terminal cupin domain KUC3_24450 PF02678 Pirin KUC3_24460 PF03466 LysR substrate binding domain KUC3_24460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_24490 PF00939 Sodium:sulfate symporter transmembrane region KUC3_24500 PF00692 dUTPase KUC3_24510 PF10609 NUBPL iron-transfer P-loop NTPase KUC3_24520 PF08264 Anticodon-binding domain of tRNA KUC3_24520 PF09334 tRNA synthetases class I (M) KUC3_24520 PF01588 Putative tRNA binding domain KUC3_24530 PF08241 Methyltransferase domain KUC3_24540 PF16123 Hydroxyacylglutathione hydrolase C-terminus KUC3_24540 PF00753 Metallo-beta-lactamase superfamily KUC3_24550 PF01464 Transglycosylase SLT domain KUC3_24550 PF01476 LysM domain KUC3_24590 PF09190 DALR domain KUC3_24590 PF01406 tRNA synthetases class I (C) catalytic domain KUC3_24600 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KUC3_24610 PF00149 Calcineurin-like phosphoesterase KUC3_24620 PF00245 Alkaline phosphatase KUC3_24630 PF00245 Alkaline phosphatase KUC3_24660 PF15975 Flotillin KUC3_24660 PF01145 SPFH domain / Band 7 family KUC3_24680 PF00005 ABC transporter KUC3_24710 PF00072 Response regulator receiver domain KUC3_24710 PF00486 Transcriptional regulatory protein, C terminal KUC3_24720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_24720 PF00672 HAMP domain KUC3_24720 PF00512 His Kinase A (phospho-acceptor) domain KUC3_24780 PF08240 Alcohol dehydrogenase GroES-like domain KUC3_24780 PF00107 Zinc-binding dehydrogenase KUC3_24790 PF03466 LysR substrate binding domain KUC3_24790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_24840 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) KUC3_24860 PF00156 Phosphoribosyl transferase domain KUC3_24870 PF02674 Colicin V production protein KUC3_24880 PF05036 Sporulation related domain KUC3_24890 PF08245 Mur ligase middle domain KUC3_24890 PF02875 Mur ligase family, glutamate ligase domain KUC3_24900 PF01039 Carboxyl transferase domain KUC3_24900 PF17848 Acetyl-coA carboxylase zinc finger domain KUC3_24920 PF01416 tRNA pseudouridine synthase KUC3_24940 PF01118 Semialdehyde dehydrogenase, NAD binding domain KUC3_24940 PF02774 Semialdehyde dehydrogenase, dimerisation domain KUC3_24950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KUC3_24950 PF11890 Domain of unknown function (DUF3410) KUC3_24950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KUC3_24960 PF00596 Class II Aldolase and Adducin N-terminal domain KUC3_24980 PF00109 Beta-ketoacyl synthase, N-terminal domain KUC3_24980 PF02801 Beta-ketoacyl synthase, C-terminal domain KUC3_25000 PF05430 S-adenosyl-L-methionine-dependent methyltransferase KUC3_25000 PF01266 FAD dependent oxidoreductase KUC3_25040 PF00005 ABC transporter KUC3_25060 PF05193 Peptidase M16 inactive domain KUC3_25060 PF00675 Insulinase (Peptidase family M16) KUC3_25080 PF02667 Short chain fatty acid transporter KUC3_25090 PF08891 YfcL protein KUC3_25110 PF04315 Elongation factor P hydroxylase KUC3_25190 PF00884 Sulfatase KUC3_25200 PF00106 short chain dehydrogenase KUC3_25220 PF12708 Pectate lyase superfamily protein KUC3_25260 PF00171 Aldehyde dehydrogenase family KUC3_25270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KUC3_25270 PF13378 Enolase C-terminal domain-like KUC3_25280 PF07944 Beta-L-arabinofuranosidase, GH127 KUC3_25290 PF00884 Sulfatase KUC3_25300 PF00884 Sulfatase KUC3_25300 PF16347 Domain of unknown function (DUF4976) KUC3_25310 PF00155 Aminotransferase class I and II KUC3_25310 PF00392 Bacterial regulatory proteins, gntR family KUC3_25320 PF01081 KDPG and KHG aldolase KUC3_25340 PF00083 Sugar (and other) transporter KUC3_25350 PF00356 Bacterial regulatory proteins, lacI family KUC3_25360 PF00593 TonB dependent receptor KUC3_25360 PF07715 TonB-dependent Receptor Plug Domain KUC3_25390 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_25390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KUC3_25400 PF00378 Enoyl-CoA hydratase/isomerase KUC3_25410 PF02909 Tetracyclin repressor-like, C-terminal domain KUC3_25410 PF00440 Bacterial regulatory proteins, tetR family KUC3_25420 PF05199 GMC oxidoreductase KUC3_25420 PF00732 GMC oxidoreductase KUC3_25440 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain KUC3_25440 PF06974 Protein of unknown function (DUF1298) KUC3_25460 PF04286 Protein of unknown function (DUF445) KUC3_25510 PF00326 Prolyl oligopeptidase family KUC3_25510 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain KUC3_25520 PF07840 FadR C-terminal domain KUC3_25520 PF00392 Bacterial regulatory proteins, gntR family KUC3_25530 PF06450 Bacterial Na+/H+ antiporter B (NhaB) KUC3_25540 PF02600 Disulfide bond formation protein DsbB KUC3_25550 PF13302 Acetyltransferase (GNAT) domain KUC3_25560 PF03692 Putative zinc- or iron-chelating domain KUC3_25570 PF01557 Fumarylacetoacetate (FAA) hydrolase family KUC3_25590 PF05166 YcgL domain KUC3_25600 PF01612 3'-5' exonuclease KUC3_25600 PF00570 HRDC domain KUC3_25610 PF00501 AMP-binding enzyme KUC3_25610 PF13193 AMP-binding enzyme C-terminal domain KUC3_25620 PF12697 Alpha/beta hydrolase family KUC3_25650 PF00814 Glycoprotease family KUC3_25660 PF06733 DEAD_2 KUC3_25660 PF13307 Helicase C-terminal domain KUC3_25690 PF01569 PAP2 superfamily KUC3_25710 PF00128 Alpha amylase, catalytic domain KUC3_25760 PF13614 AAA domain KUC3_25780 PF08029 HisG, C-terminal domain KUC3_25780 PF01634 ATP phosphoribosyltransferase KUC3_25790 PF00815 Histidinol dehydrogenase KUC3_25800 PF00155 Aminotransferase class I and II KUC3_25810 PF00475 Imidazoleglycerol-phosphate dehydratase KUC3_25820 PF00117 Glutamine amidotransferase class-I KUC3_25830 PF00977 Histidine biosynthesis protein KUC3_25840 PF00977 Histidine biosynthesis protein KUC3_25850 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KUC3_25850 PF01502 Phosphoribosyl-AMP cyclohydrolase KUC3_25870 PF03466 LysR substrate binding domain KUC3_25870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_25880 PF00675 Insulinase (Peptidase family M16) KUC3_25880 PF05193 Peptidase M16 inactive domain KUC3_25890 PF10502 Signal peptidase, peptidase S26 KUC3_25900 PF00593 TonB dependent receptor KUC3_25900 PF07715 TonB-dependent Receptor Plug Domain KUC3_25920 PF05191 Adenylate kinase, active site lid KUC3_25930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_25930 PF00183 Hsp90 protein KUC3_25940 PF02132 RecR protein KUC3_25940 PF13662 Toprim domain KUC3_25970 PF02575 YbaB/EbfC DNA-binding family KUC3_25980 PF12169 DNA polymerase III subunits gamma and tau domain III KUC3_25980 PF12170 DNA polymerase III tau subunit V interacting with alpha KUC3_25980 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding KUC3_25990 PF00156 Phosphoribosyl transferase domain KUC3_26010 PF05114 Protein of unknown function (DUF692) KUC3_26040 PF01066 CDP-alcohol phosphatidyltransferase KUC3_26080 PF01565 FAD binding domain KUC3_26080 PF09330 D-lactate dehydrogenase, membrane binding KUC3_26090 PF10431 C-terminal, D2-small domain, of ClpB protein KUC3_26090 PF02861 Clp amino terminal domain, pathogenicity island component KUC3_26090 PF17871 AAA lid domain KUC3_26090 PF07724 AAA domain (Cdc48 subfamily) KUC3_26090 PF00004 ATPase family associated with various cellular activities (AAA) KUC3_26100 PF02578 Multi-copper polyphenol oxidoreductase laccase KUC3_26110 PF00849 RNA pseudouridylate synthase KUC3_26110 PF01479 S4 domain KUC3_26120 PF13525 Outer membrane lipoprotein KUC3_26140 PF04542 Sigma-70 region 2 KUC3_26140 PF04545 Sigma-70, region 4 KUC3_26170 PF00106 short chain dehydrogenase KUC3_26180 PF01593 Flavin containing amine oxidoreductase KUC3_26210 PF13677 Membrane MotB of proton-channel complex MotA/MotB KUC3_26210 PF00691 OmpA family KUC3_26220 PF01618 MotA/TolQ/ExbB proton channel family KUC3_26230 PF02609 Exonuclease VII small subunit KUC3_26240 PF00348 Polyprenyl synthetase KUC3_26250 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KUC3_26250 PF02779 Transketolase, pyrimidine binding domain KUC3_26250 PF02780 Transketolase, C-terminal domain KUC3_26260 PF04608 Phosphatidylglycerophosphatase A KUC3_26270 PF02769 AIR synthase related protein, C-terminal domain KUC3_26270 PF00586 AIR synthase related protein, N-terminal domain KUC3_26280 PF01029 NusB family KUC3_26290 PF00885 6,7-dimethyl-8-ribityllumazine synthase KUC3_26300 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KUC3_26300 PF00925 GTP cyclohydrolase II KUC3_26310 PF00677 Lumazine binding domain KUC3_26320 PF01872 RibD C-terminal domain KUC3_26320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KUC3_26330 PF03477 ATP cone domain KUC3_26340 PF00464 Serine hydroxymethyltransferase KUC3_26350 PF00132 Bacterial transferase hexapeptide (six repeats) KUC3_26350 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD KUC3_26360 PF00005 ABC transporter KUC3_26360 PF12848 ABC transporter KUC3_26380 PF18073 Rubredoxin metal binding domain KUC3_26400 PF18429 Domain of unknown function (DUF5609) KUC3_26420 PF01026 TatD related DNase KUC3_26430 PF01243 Pyridoxamine 5'-phosphate oxidase KUC3_26430 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region KUC3_26440 PF07650 KH domain KUC3_26440 PF01926 50S ribosome-binding GTPase KUC3_26450 PF14622 Ribonuclease-III-like KUC3_26450 PF00035 Double-stranded RNA binding motif KUC3_26460 PF10502 Signal peptidase, peptidase S26 KUC3_26470 PF00009 Elongation factor Tu GTP binding domain KUC3_26470 PF03144 Elongation factor Tu domain 2 KUC3_26470 PF06421 GTP-binding protein LepA C-terminus KUC3_26470 PF00679 Elongation factor G C-terminus KUC3_26490 PF03888 MucB/RseB N-terminal domain KUC3_26490 PF17188 MucB/RseB C-terminal domain KUC3_26510 PF04542 Sigma-70 region 2 KUC3_26510 PF08281 Sigma-70, region 4 KUC3_26520 PF02910 Fumarate reductase flavoprotein C-term KUC3_26520 PF00890 FAD binding domain KUC3_26550 PF03937 Flavinator of succinate dehydrogenase KUC3_26570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KUC3_26580 PF00543 Nitrogen regulatory protein P-II KUC3_26590 PF02540 NAD synthase KUC3_26660 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor KUC3_26660 PF07963 Prokaryotic N-terminal methylation motif KUC3_26710 PF02401 LytB protein KUC3_26720 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KUC3_26730 PF01252 Signal peptidase (SPase) II KUC3_26740 PF06827 Zinc finger found in FPG and IleRS KUC3_26740 PF00133 tRNA synthetases class I (I, L, M and V) KUC3_26740 PF08264 Anticodon-binding domain of tRNA KUC3_26750 PF01687 Riboflavin kinase KUC3_26750 PF06574 FAD synthetase KUC3_26760 PF03023 Lipid II flippase MurJ KUC3_26770 PF03023 Lipid II flippase MurJ KUC3_26780 PF01649 Ribosomal protein S20 KUC3_26790 PF00106 short chain dehydrogenase KUC3_26810 PF00106 short chain dehydrogenase KUC3_26820 PF01758 Sodium Bile acid symporter family KUC3_26830 PF03466 LysR substrate binding domain KUC3_26830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_26870 PF01546 Peptidase family M20/M25/M40 KUC3_26870 PF07687 Peptidase dimerisation domain KUC3_26890 PF00216 Bacterial DNA-binding protein KUC3_26900 PF00004 ATPase family associated with various cellular activities (AAA) KUC3_26900 PF02190 ATP-dependent protease La (LON) substrate-binding domain KUC3_26900 PF05362 Lon protease (S16) C-terminal proteolytic domain KUC3_26920 PF06689 ClpX C4-type zinc finger KUC3_26920 PF10431 C-terminal, D2-small domain, of ClpB protein KUC3_26920 PF07724 AAA domain (Cdc48 subfamily) KUC3_26930 PF00574 Clp protease KUC3_26940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KUC3_26940 PF05698 Bacterial trigger factor protein (TF) C-terminus KUC3_26940 PF05697 Bacterial trigger factor protein (TF) KUC3_26950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KUC3_26950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KUC3_26970 PF18389 TrmO C-terminal domain KUC3_26970 PF01980 tRNA-methyltransferase O KUC3_26980 PF03129 Anticodon binding domain KUC3_26980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KUC3_26990 PF12706 Beta-lactamase superfamily domain KUC3_26990 PF00753 Metallo-beta-lactamase superfamily KUC3_27000 PF02253 Phospholipase A1 KUC3_27010 PF00850 Histone deacetylase domain KUC3_27020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_27020 PF00672 HAMP domain KUC3_27020 PF02743 Cache domain KUC3_27040 PF00174 Oxidoreductase molybdopterin binding domain KUC3_27070 PF00034 Cytochrome c KUC3_27070 PF03150 Di-haem cytochrome c peroxidase KUC3_27080 PF00672 HAMP domain KUC3_27080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_27080 PF02743 Cache domain KUC3_27120 PF02540 NAD synthase KUC3_27120 PF00958 GMP synthase C terminal domain KUC3_27120 PF00117 Glutamine amidotransferase class-I KUC3_27130 PF00571 CBS domain KUC3_27130 PF00478 IMP dehydrogenase / GMP reductase domain KUC3_27140 PF02601 Exonuclease VII, large subunit KUC3_27140 PF13742 OB-fold nucleic acid binding domain KUC3_27180 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KUC3_27180 PF01926 50S ribosome-binding GTPase KUC3_27190 PF13360 PQQ-like domain KUC3_27200 PF09976 Tetratricopeptide repeat-like domain KUC3_27210 PF13393 Histidyl-tRNA synthetase KUC3_27210 PF03129 Anticodon binding domain KUC3_27220 PF04551 GcpE protein KUC3_27230 PF13464 Domain of unknown function (DUF4115) KUC3_27250 PF04055 Radical SAM superfamily KUC3_27260 PF00334 Nucleoside diphosphate kinase KUC3_27270 PF02657 Fe-S metabolism associated domain KUC3_27280 PF01883 Iron-sulfur cluster assembly protein KUC3_27290 PF01521 Iron-sulphur cluster biosynthesis KUC3_27300 PF00266 Aminotransferase class-V KUC3_27310 PF01458 Uncharacterized protein family (UPF0051) KUC3_27320 PF00005 ABC transporter KUC3_27330 PF01458 Uncharacterized protein family (UPF0051) KUC3_27340 PF00266 Aminotransferase class-V KUC3_27350 PF02082 Transcriptional regulator KUC3_27360 PF00132 Bacterial transferase hexapeptide (six repeats) KUC3_27360 PF06426 Serine acetyltransferase, N-terminal KUC3_27370 PF00588 SpoU rRNA Methylase family KUC3_27380 PF00459 Inositol monophosphatase family KUC3_27410 PF02355 Protein export membrane protein KUC3_27410 PF07549 SecD/SecF GG Motif KUC3_27420 PF02355 Protein export membrane protein KUC3_27420 PF13721 SecD export protein N-terminal TM region KUC3_27420 PF07549 SecD/SecF GG Motif KUC3_27430 PF02699 Preprotein translocase subunit KUC3_27440 PF01702 Queuine tRNA-ribosyltransferase KUC3_27450 PF02547 Queuosine biosynthesis protein KUC3_27480 PF04012 PspA/IM30 family KUC3_27490 PF07885 Ion channel KUC3_27520 PF06693 Protein of unknown function (DUF1190) KUC3_27530 PF03738 Glutathionylspermidine synthase preATP-grasp KUC3_27560 PF00005 ABC transporter KUC3_27590 PF04960 Glutaminase KUC3_27600 PF00245 Alkaline phosphatase KUC3_27610 PF00072 Response regulator receiver domain KUC3_27620 PF00463 Isocitrate lyase family KUC3_27630 PF03466 LysR substrate binding domain KUC3_27630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_27640 PF01274 Malate synthase KUC3_27670 PF01370 NAD dependent epimerase/dehydratase family KUC3_27780 PF00534 Glycosyl transferases group 1 KUC3_27780 PF13439 Glycosyltransferase Family 4 KUC3_27870 PF00534 Glycosyl transferases group 1 KUC3_27870 PF13439 Glycosyltransferase Family 4 KUC3_27890 PF01757 Acyltransferase family KUC3_27900 PF13537 Glutamine amidotransferase domain KUC3_27900 PF00733 Asparagine synthase KUC3_27960 PF13537 Glutamine amidotransferase domain KUC3_27960 PF00733 Asparagine synthase KUC3_27990 PF01522 Polysaccharide deacetylase KUC3_28000 PF02397 Bacterial sugar transferase KUC3_28030 PF13614 AAA domain KUC3_28050 PF13401 AAA domain KUC3_28050 PF01471 Putative peptidoglycan binding domain KUC3_28060 PF01467 Cytidylyltransferase-like KUC3_28060 PF00294 pfkB family carbohydrate kinase KUC3_28070 PF01541 GIY-YIG catalytic domain KUC3_28090 PF08335 GlnD PII-uridylyltransferase KUC3_28090 PF03710 Glutamate-ammonia ligase adenylyltransferase KUC3_28110 PF03279 Bacterial lipid A biosynthesis acyltransferase KUC3_28140 PF02770 Acyl-CoA dehydrogenase, middle domain KUC3_28140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUC3_28140 PF09317 Domain of unknown function (DUF1974) KUC3_28140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KUC3_28160 PF00990 Diguanylate cyclase, GGDEF domain KUC3_28160 PF00563 EAL domain KUC3_28160 PF03707 Bacterial signalling protein N terminal repeat KUC3_28170 PF00265 Thymidine kinase KUC3_28190 PF00356 Bacterial regulatory proteins, lacI family KUC3_28240 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation KUC3_28240 PF14508 Glycosyl-hydrolase 97 N-terminal KUC3_28240 PF10566 Glycoside hydrolase 97 KUC3_28250 PF01926 50S ribosome-binding GTPase KUC3_28260 PF00588 SpoU rRNA Methylase family KUC3_28260 PF08032 RNA 2'-O ribose methyltransferase substrate binding KUC3_28290 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain KUC3_28290 PF01276 Orn/Lys/Arg decarboxylase, major domain KUC3_28290 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KUC3_28320 PF00171 Aldehyde dehydrogenase family KUC3_28330 PF05199 GMC oxidoreductase KUC3_28330 PF00732 GMC oxidoreductase KUC3_28360 PF05971 RNA methyltransferase KUC3_28370 PF09278 MerR, DNA binding KUC3_28370 PF00376 MerR family regulatory protein KUC3_28440 PF18158 Adaptive response protein AidB N-terminal domain KUC3_28440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KUC3_28440 PF02770 Acyl-CoA dehydrogenase, middle domain KUC3_28480 PF12633 Adenylate cyclase NT domain KUC3_28480 PF01295 Adenylate cyclase, class-I KUC3_28490 PF03965 Penicillinase repressor KUC3_28510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KUC3_28570 PF07715 TonB-dependent Receptor Plug Domain KUC3_28570 PF00593 TonB dependent receptor KUC3_28580 PF03442 Carbohydrate binding domain X2 KUC3_28580 PF00942 Cellulose binding domain KUC3_28600 PF03631 Virulence factor BrkB KUC3_28610 PF00563 EAL domain KUC3_28610 PF03707 Bacterial signalling protein N terminal repeat KUC3_28610 PF00990 Diguanylate cyclase, GGDEF domain KUC3_28620 PF00144 Beta-lactamase KUC3_28640 PF04397 LytTr DNA-binding domain KUC3_28640 PF00072 Response regulator receiver domain KUC3_28650 PF00756 Putative esterase KUC3_28670 PF12833 Helix-turn-helix domain KUC3_28670 PF02311 AraC-like ligand binding domain KUC3_28730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KUC3_28730 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KUC3_28740 PF07152 YaeQ protein KUC3_28770 PF00144 Beta-lactamase KUC3_28830 PF01627 Hpt domain KUC3_28830 PF00072 Response regulator receiver domain KUC3_28830 PF00512 His Kinase A (phospho-acceptor) domain KUC3_28830 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KUC3_28830 PF00672 HAMP domain KUC3_28830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_28930 PF00158 Sigma-54 interaction domain KUC3_28930 PF06956 Regulator of RNA terminal phosphate cyclase KUC3_28950 PF01139 tRNA-splicing ligase RtcB KUC3_28960 PF01137 RNA 3'-terminal phosphate cyclase KUC3_28960 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain KUC3_28970 PF00472 RF-1 domain KUC3_29000 PF13087 AAA domain KUC3_29000 PF13091 PLD-like domain KUC3_29030 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) KUC3_29030 PF12008 Type I restriction and modification enzyme - subunit R C terminal KUC3_29030 PF18766 SWI2/SNF2 ATPase KUC3_29040 PF02384 N-6 DNA Methylase KUC3_29050 PF01420 Type I restriction modification DNA specificity domain KUC3_29090 PF02347 Glycine cleavage system P-protein KUC3_29100 PF01597 Glycine cleavage H-protein KUC3_29110 PF01571 Aminomethyltransferase folate-binding domain KUC3_29110 PF08669 Glycine cleavage T-protein C-terminal barrel domain KUC3_29120 PF03575 Peptidase family S51 KUC3_29130 PF01048 Phosphorylase superfamily KUC3_29140 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) KUC3_29140 PF06594 Haemolysin-type calcium binding protein related domain KUC3_29150 PF07690 Major Facilitator Superfamily KUC3_29160 PF01979 Amidohydrolase family KUC3_29170 PF01380 SIS domain KUC3_29180 PF01869 BadF/BadG/BcrA/BcrD ATPase family KUC3_29190 PF03173 Putative carbohydrate binding domain KUC3_29190 PF00728 Glycosyl hydrolase family 20, catalytic domain KUC3_29190 PF02838 Glycosyl hydrolase family 20, domain 2 KUC3_29210 PF00356 Bacterial regulatory proteins, lacI family KUC3_29220 PF04820 Tryptophan halogenase KUC3_29230 PF03466 LysR substrate binding domain KUC3_29230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_29240 PF01321 Creatinase/Prolidase N-terminal domain KUC3_29240 PF00557 Metallopeptidase family M24 KUC3_29270 PF01494 FAD binding domain KUC3_29280 PF01494 FAD binding domain KUC3_29290 PF05195 Aminopeptidase P, N-terminal domain KUC3_29290 PF00557 Metallopeptidase family M24 KUC3_29300 PF03695 Uncharacterised protein family (UPF0149) KUC3_29310 PF00294 pfkB family carbohydrate kinase KUC3_29320 PF01156 Inosine-uridine preferring nucleoside hydrolase KUC3_29330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_29330 PF00512 His Kinase A (phospho-acceptor) domain KUC3_29330 PF00989 PAS fold KUC3_29330 PF01627 Hpt domain KUC3_29330 PF00072 Response regulator receiver domain KUC3_29330 PF18415 Histidine kinase receptor ArcB trans-membrane domain KUC3_29340 PF01812 5-formyltetrahydrofolate cyclo-ligase family KUC3_29360 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KUC3_29370 PF01842 ACT domain KUC3_29370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KUC3_29370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KUC3_29410 PF06945 Protein of unknown function (DUF1289) KUC3_29430 PF00873 AcrB/AcrD/AcrF family KUC3_29440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KUC3_29450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_29450 PF03466 LysR substrate binding domain KUC3_29470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KUC3_29470 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_29480 PF00364 Biotin-requiring enzyme KUC3_29480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KUC3_29480 PF02817 e3 binding domain KUC3_29490 PF17831 Pyruvate dehydrogenase E1 component middle domain KUC3_29490 PF00456 Transketolase, thiamine diphosphate binding domain KUC3_29500 PF00392 Bacterial regulatory proteins, gntR family KUC3_29500 PF07729 FCD domain KUC3_29520 PF01510 N-acetylmuramoyl-L-alanine amidase KUC3_29540 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain KUC3_29540 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain KUC3_29560 PF00482 Type II secretion system (T2SS), protein F KUC3_29570 PF01478 Type IV leader peptidase family KUC3_29570 PF06750 Bacterial Peptidase A24 N-terminal domain KUC3_29580 PF01121 Dephospho-CoA kinase KUC3_29590 PF07072 Cell division protein KUC3_29600 PF03884 DNA gyrase inhibitor YacG KUC3_29610 PF09278 MerR, DNA binding KUC3_29610 PF00376 MerR family regulatory protein KUC3_29620 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_29620 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KUC3_29630 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family KUC3_29640 PF00293 NUDIX domain KUC3_29650 PF07517 SecA DEAD-like domain KUC3_29650 PF01043 SecA preprotein cross-linking domain KUC3_29650 PF07516 SecA Wing and Scaffold domain KUC3_29650 PF02810 SEC-C motif KUC3_29660 PF01476 LysM domain KUC3_29660 PF01551 Peptidase family M23 KUC3_29660 PF08525 Opacity-associated protein A N-terminal motif KUC3_29670 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase KUC3_29680 PF12327 FtsZ family, C-terminal domain KUC3_29680 PF00091 Tubulin/FtsZ family, GTPase domain KUC3_29690 PF02491 SHS2 domain inserted in FTSA KUC3_29700 PF03799 Cell division protein FtsQ KUC3_29700 PF08478 POTRA domain, FtsQ-type KUC3_29710 PF01820 D-ala D-ala ligase N-terminus KUC3_29710 PF07478 D-ala D-ala ligase C-terminus KUC3_29720 PF01225 Mur ligase family, catalytic domain KUC3_29720 PF02875 Mur ligase family, glutamate ligase domain KUC3_29720 PF08245 Mur ligase middle domain KUC3_29730 PF03033 Glycosyltransferase family 28 N-terminal domain KUC3_29730 PF04101 Glycosyltransferase family 28 C-terminal domain KUC3_29740 PF01098 Cell cycle protein KUC3_29750 PF02875 Mur ligase family, glutamate ligase domain KUC3_29750 PF08245 Mur ligase middle domain KUC3_29760 PF00953 Glycosyl transferase family 4 KUC3_29760 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KUC3_29770 PF08245 Mur ligase middle domain KUC3_29770 PF02875 Mur ligase family, glutamate ligase domain KUC3_29770 PF01225 Mur ligase family, catalytic domain KUC3_29780 PF02875 Mur ligase family, glutamate ligase domain KUC3_29780 PF08245 Mur ligase middle domain KUC3_29780 PF01225 Mur ligase family, catalytic domain KUC3_29790 PF00905 Penicillin binding protein transpeptidase domain KUC3_29790 PF03717 Penicillin-binding Protein dimerisation domain KUC3_29800 PF04999 Cell division protein FtsL KUC3_29810 PF01795 MraW methylase family KUC3_29820 PF02381 MraZ protein, putative antitoxin-like KUC3_29870 PF00873 AcrB/AcrD/AcrF family KUC3_29880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion KUC3_29920 PF00462 Glutaredoxin KUC3_29920 PF08534 Redoxin KUC3_29930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KUC3_29950 PF00990 Diguanylate cyclase, GGDEF domain KUC3_29970 PF00072 Response regulator receiver domain KUC3_29970 PF00158 Sigma-54 interaction domain KUC3_29970 PF02954 Bacterial regulatory protein, Fis family KUC3_29980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_29980 PF00512 His Kinase A (phospho-acceptor) domain KUC3_29980 PF09456 RcsC Alpha-Beta-Loop (ABL) KUC3_29980 PF00072 Response regulator receiver domain KUC3_29990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KUC3_29990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KUC3_30040 PF05552 Conserved TM helix KUC3_30040 PF00924 Mechanosensitive ion channel KUC3_30050 PF04452 RNA methyltransferase KUC3_30060 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain KUC3_30060 PF02951 Prokaryotic glutathione synthetase, N-terminal domain KUC3_30070 PF02622 Uncharacterized ACR, COG1678 KUC3_30080 PF03652 Holliday junction resolvase KUC3_30100 PF00437 Type II/IV secretion system protein KUC3_30110 PF00437 Type II/IV secretion system protein KUC3_30120 PF01168 Alanine racemase, N-terminal domain KUC3_30130 PF14748 Pyrroline-5-carboxylate reductase dimerisation KUC3_30130 PF03807 NADP oxidoreductase coenzyme F420-dependent KUC3_30140 PF02325 YGGT family KUC3_30200 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_30200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KUC3_30240 PF00043 Glutathione S-transferase, C-terminal domain KUC3_30240 PF02798 Glutathione S-transferase, N-terminal domain KUC3_30260 PF03591 AzlC protein KUC3_30290 PF08279 HTH domain KUC3_30290 PF13280 WYL domain KUC3_30300 PF03883 Peroxide stress protein YaaA KUC3_30310 PF00923 Transaldolase/Fructose-6-phosphate aldolase KUC3_30320 PF00342 Phosphoglucose isomerase KUC3_30340 PF03167 Uracil DNA glycosylase superfamily KUC3_30350 PF00291 Pyridoxal-phosphate dependent enzyme KUC3_30350 PF14821 Threonine synthase N terminus KUC3_30360 PF08544 GHMP kinases C terminal KUC3_30360 PF00288 GHMP kinases N terminal domain KUC3_30370 PF00696 Amino acid kinase family KUC3_30370 PF13840 ACT domain KUC3_30370 PF01842 ACT domain KUC3_30370 PF00742 Homoserine dehydrogenase KUC3_30370 PF03447 Homoserine dehydrogenase, NAD binding domain KUC3_30380 PF01842 ACT domain KUC3_30380 PF03447 Homoserine dehydrogenase, NAD binding domain KUC3_30380 PF13840 ACT domain KUC3_30380 PF00742 Homoserine dehydrogenase KUC3_30380 PF00696 Amino acid kinase family KUC3_30390 PF03466 LysR substrate binding domain KUC3_30390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_30400 PF00107 Zinc-binding dehydrogenase KUC3_30400 PF08240 Alcohol dehydrogenase GroES-like domain KUC3_30410 PF00196 Bacterial regulatory proteins, luxR family KUC3_30410 PF00072 Response regulator receiver domain KUC3_30420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_30420 PF07730 Histidine kinase KUC3_30450 PF00672 HAMP domain KUC3_30450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_30450 PF02743 Cache domain KUC3_30460 PF01022 Bacterial regulatory protein, arsR family KUC3_30480 PF03358 NADPH-dependent FMN reductase KUC3_30490 PF01758 Sodium Bile acid symporter family KUC3_30500 PF00072 Response regulator receiver domain KUC3_30500 PF00196 Bacterial regulatory proteins, luxR family KUC3_30510 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) KUC3_30520 PF00486 Transcriptional regulatory protein, C terminal KUC3_30520 PF00072 Response regulator receiver domain KUC3_30530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_30530 PF00512 His Kinase A (phospho-acceptor) domain KUC3_30530 PF00672 HAMP domain KUC3_30580 PF16653 Saccharopine dehydrogenase C-terminal domain KUC3_30580 PF03435 Saccharopine dehydrogenase NADP binding domain KUC3_30590 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KUC3_30600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KUC3_30610 PF04348 LppC putative lipoprotein KUC3_30620 PF02021 Uncharacterised protein family UPF0102 KUC3_30630 PF13580 SIS domain KUC3_30640 PF04972 BON domain KUC3_30650 PF07690 Major Facilitator Superfamily KUC3_30670 PF00893 Small Multidrug Resistance protein KUC3_30680 PF07730 Histidine kinase KUC3_30690 PF00196 Bacterial regulatory proteins, luxR family KUC3_30690 PF00072 Response regulator receiver domain KUC3_30710 PF00593 TonB dependent receptor KUC3_30710 PF07715 TonB-dependent Receptor Plug Domain KUC3_30720 PF07729 FCD domain KUC3_30720 PF00392 Bacterial regulatory proteins, gntR family KUC3_30740 PF00285 Citrate synthase, C-terminal domain KUC3_30750 PF00330 Aconitase family (aconitate hydratase) KUC3_30750 PF00694 Aconitase C-terminal domain KUC3_30770 PF04303 PrpF protein KUC3_30780 PF00990 Diguanylate cyclase, GGDEF domain KUC3_30810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_30810 PF00512 His Kinase A (phospho-acceptor) domain KUC3_30810 PF18415 Histidine kinase receptor ArcB trans-membrane domain KUC3_30810 PF01627 Hpt domain KUC3_30810 PF00989 PAS fold KUC3_30810 PF00072 Response regulator receiver domain KUC3_30820 PF01510 N-acetylmuramoyl-L-alanine amidase KUC3_30830 PF01493 GXGXG motif KUC3_30830 PF01645 Conserved region in glutamate synthase KUC3_30830 PF04898 Glutamate synthase central domain KUC3_30830 PF00310 Glutamine amidotransferases class-II KUC3_30840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KUC3_30840 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_30850 PF00266 Aminotransferase class-V KUC3_30890 PF01048 Phosphorylase superfamily KUC3_30900 PF03186 CobD/Cbib protein KUC3_30900 PF17113 Regulatory signalling modulator protein AmpE KUC3_30910 PF01497 Periplasmic binding protein KUC3_30920 PF00581 Rhodanese-like domain KUC3_30920 PF17773 UPF0176 acylphosphatase like domain KUC3_30950 PF01266 FAD dependent oxidoreductase KUC3_30960 PF07237 Protein of unknown function (DUF1428) KUC3_30970 PF01479 S4 domain KUC3_30970 PF00579 tRNA synthetases class I (W and Y) KUC3_30980 PF01551 Peptidase family M23 KUC3_30980 PF10145 Phage-related minor tail protein KUC3_30980 PF01464 Transglycosylase SLT domain KUC3_30990 PF03702 Anhydro-N-acetylmuramic acid kinase KUC3_31000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KUC3_31020 PF01053 Cys/Met metabolism PLP-dependent enzyme KUC3_31030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KUC3_31030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KUC3_31040 PF00043 Glutathione S-transferase, C-terminal domain KUC3_31040 PF13417 Glutathione S-transferase, N-terminal domain KUC3_31050 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase KUC3_31060 PF00111 2Fe-2S iron-sulfur cluster binding domain KUC3_31060 PF01799 [2Fe-2S] binding domain KUC3_31070 PF01521 Iron-sulphur cluster biosynthesis KUC3_31080 PF03976 Polyphosphate kinase 2 (PPK2) KUC3_31090 PF00990 Diguanylate cyclase, GGDEF domain KUC3_31090 PF00072 Response regulator receiver domain KUC3_31110 PF00535 Glycosyl transferase family 2 KUC3_31120 PF02397 Bacterial sugar transferase KUC3_31140 PF02954 Bacterial regulatory protein, Fis family KUC3_31140 PF00072 Response regulator receiver domain KUC3_31140 PF00158 Sigma-54 interaction domain KUC3_31150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_31150 PF00512 His Kinase A (phospho-acceptor) domain KUC3_31150 PF08448 PAS fold KUC3_31150 PF13188 PAS domain KUC3_31150 PF00072 Response regulator receiver domain KUC3_31160 PF03776 Septum formation topological specificity factor MinE KUC3_31170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KUC3_31180 PF05209 Septum formation inhibitor MinC, N-terminal domain KUC3_31180 PF03775 Septum formation inhibitor MinC, C-terminal domain KUC3_31190 PF00206 Lyase KUC3_31190 PF10415 Fumarase C C-terminus KUC3_31220 PF03653 Uncharacterised protein family (UPF0093) KUC3_31250 PF01566 Natural resistance-associated macrophage protein KUC3_31260 PF00155 Aminotransferase class I and II KUC3_31270 PF00072 Response regulator receiver domain KUC3_31270 PF13188 PAS domain KUC3_31270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_31270 PF00512 His Kinase A (phospho-acceptor) domain KUC3_31270 PF08448 PAS fold KUC3_31280 PF00679 Elongation factor G C-terminus KUC3_31280 PF03144 Elongation factor Tu domain 2 KUC3_31280 PF00009 Elongation factor Tu GTP binding domain KUC3_31290 PF03951 Glutamine synthetase, beta-Grasp domain KUC3_31290 PF00120 Glutamine synthetase, catalytic domain KUC3_31310 PF00989 PAS fold KUC3_31310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_31310 PF00512 His Kinase A (phospho-acceptor) domain KUC3_31320 PF00158 Sigma-54 interaction domain KUC3_31320 PF00072 Response regulator receiver domain KUC3_31320 PF02954 Bacterial regulatory protein, Fis family KUC3_31340 PF00072 Response regulator receiver domain KUC3_31350 PF01553 Acyltransferase KUC3_31360 PF06877 Regulator of ribonuclease activity B KUC3_31390 PF01627 Hpt domain KUC3_31390 PF00672 HAMP domain KUC3_31390 PF00512 His Kinase A (phospho-acceptor) domain KUC3_31390 PF00072 Response regulator receiver domain KUC3_31390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_31390 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) KUC3_31410 PF10458 Valyl tRNA synthetase tRNA binding arm KUC3_31410 PF08264 Anticodon-binding domain of tRNA KUC3_31410 PF00133 tRNA synthetases class I (I, L, M and V) KUC3_31420 PF04364 DNA polymerase III chi subunit, HolC KUC3_31430 PF02789 Cytosol aminopeptidase family, N-terminal domain KUC3_31430 PF00883 Cytosol aminopeptidase family, catalytic domain KUC3_31440 PF03739 Lipopolysaccharide export system permease LptF/LptG KUC3_31450 PF03739 Lipopolysaccharide export system permease LptF/LptG KUC3_31470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KUC3_31470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KUC3_31490 PF04545 Sigma-70, region 4 KUC3_31490 PF04542 Sigma-70 region 2 KUC3_31640 PF00004 ATPase family associated with various cellular activities (AAA) KUC3_31640 PF17866 AAA lid domain KUC3_31700 PF01966 HD domain KUC3_31700 PF00072 Response regulator receiver domain KUC3_31720 PF01751 Toprim domain KUC3_31720 PF01396 Topoisomerase DNA binding C4 zinc finger KUC3_31720 PF01131 DNA topoisomerase KUC3_31740 PF01693 Caulimovirus viroplasmin KUC3_31770 PF00004 ATPase family associated with various cellular activities (AAA) KUC3_31770 PF01434 Peptidase family M41 KUC3_31770 PF17862 AAA+ lid domain KUC3_31780 PF02899 Phage integrase, N-terminal SAM-like domain KUC3_31780 PF00589 Phage integrase family KUC3_31820 PF13361 UvrD-like helicase C-terminal domain KUC3_31820 PF00580 UvrD/REP helicase N-terminal domain KUC3_31840 PF00722 Glycosyl hydrolases family 16 KUC3_31890 PF01396 Topoisomerase DNA binding C4 zinc finger KUC3_31890 PF01131 DNA topoisomerase KUC3_31890 PF01751 Toprim domain KUC3_32010 PF00563 EAL domain KUC3_32010 PF00990 Diguanylate cyclase, GGDEF domain KUC3_32010 PF03707 Bacterial signalling protein N terminal repeat KUC3_32040 PF13407 Periplasmic binding protein domain KUC3_32060 PF00072 Response regulator receiver domain KUC3_32060 PF00486 Transcriptional regulatory protein, C terminal KUC3_32080 PF02696 Uncharacterized ACR, YdiU/UPF0061 family KUC3_32090 PF00580 UvrD/REP helicase N-terminal domain KUC3_32090 PF13361 UvrD-like helicase C-terminal domain KUC3_32100 PF00378 Enoyl-CoA hydratase/isomerase KUC3_32150 PF00535 Glycosyl transferase family 2 KUC3_32160 PF13439 Glycosyltransferase Family 4 KUC3_32160 PF00534 Glycosyl transferases group 1 KUC3_32190 PF05736 OprF membrane domain KUC3_32190 PF00691 OmpA family KUC3_32230 PF00557 Metallopeptidase family M24 KUC3_32230 PF01321 Creatinase/Prolidase N-terminal domain KUC3_32240 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KUC3_32240 PF05221 S-adenosyl-L-homocysteine hydrolase KUC3_32280 PF00171 Aldehyde dehydrogenase family KUC3_32290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KUC3_32290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KUC3_32300 PF01565 FAD binding domain KUC3_32300 PF09330 D-lactate dehydrogenase, membrane binding KUC3_32310 PF00196 Bacterial regulatory proteins, luxR family KUC3_32320 PF03783 Curli production assembly/transport component CsgG KUC3_32370 PF00082 Subtilase family KUC3_32380 PF00196 Bacterial regulatory proteins, luxR family KUC3_32380 PF00072 Response regulator receiver domain KUC3_32390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_32390 PF07730 Histidine kinase KUC3_32410 PF00270 DEAD/DEAH box helicase KUC3_32410 PF00271 Helicase conserved C-terminal domain KUC3_32430 PF00924 Mechanosensitive ion channel KUC3_32430 PF05552 Conserved TM helix KUC3_32450 PF00141 Peroxidase KUC3_32470 PF00990 Diguanylate cyclase, GGDEF domain KUC3_32470 PF13426 PAS domain KUC3_32470 PF00563 EAL domain KUC3_32490 PF03372 Endonuclease/Exonuclease/phosphatase family KUC3_32500 PF03466 LysR substrate binding domain KUC3_32500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_32520 PF01925 Sulfite exporter TauE/SafE KUC3_32530 PF00155 Aminotransferase class I and II KUC3_32540 PF00072 Response regulator receiver domain KUC3_32540 PF08769 Sporulation initiation factor Spo0A C terminal KUC3_32560 PF00512 His Kinase A (phospho-acceptor) domain KUC3_32560 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUC3_32560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_32580 PF00136 DNA polymerase family B KUC3_32580 PF03104 DNA polymerase family B, exonuclease domain KUC3_32630 PF05958 tRNA (Uracil-5-)-methyltransferase KUC3_32640 PF00440 Bacterial regulatory proteins, tetR family KUC3_32660 PF12697 Alpha/beta hydrolase family KUC3_32680 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_32680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KUC3_32700 PF03167 Uracil DNA glycosylase superfamily KUC3_32710 PF00990 Diguanylate cyclase, GGDEF domain KUC3_32710 PF00563 EAL domain KUC3_32710 PF03707 Bacterial signalling protein N terminal repeat KUC3_32730 PF01507 Phosphoadenosine phosphosulfate reductase family KUC3_32740 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KUC3_32740 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KUC3_32750 PF00175 Oxidoreductase NAD-binding domain KUC3_32750 PF00667 FAD binding domain KUC3_32750 PF00258 Flavodoxin KUC3_32790 PF04024 PspC domain KUC3_32800 PF04012 PspA/IM30 family KUC3_32830 PF01207 Dihydrouridine synthase (Dus) KUC3_32850 PF00691 OmpA family KUC3_32850 PF01389 OmpA-like transmembrane domain KUC3_32860 PF10431 C-terminal, D2-small domain, of ClpB protein KUC3_32860 PF17871 AAA lid domain KUC3_32860 PF00004 ATPase family associated with various cellular activities (AAA) KUC3_32860 PF07724 AAA domain (Cdc48 subfamily) KUC3_32860 PF02861 Clp amino terminal domain, pathogenicity island component KUC3_32870 PF03707 Bacterial signalling protein N terminal repeat KUC3_32870 PF00990 Diguanylate cyclase, GGDEF domain KUC3_32870 PF00563 EAL domain KUC3_32880 PF00756 Putative esterase KUC3_32890 PF01553 Acyltransferase KUC3_32900 PF01553 Acyltransferase KUC3_32910 PF00924 Mechanosensitive ion channel KUC3_32940 PF01370 NAD dependent epimerase/dehydratase family KUC3_32950 PF00209 Sodium:neurotransmitter symporter family KUC3_32980 PF01625 Peptide methionine sulfoxide reductase KUC3_33010 PF00258 Flavodoxin KUC3_33030 PF02472 Biopolymer transport protein ExbD/TolR KUC3_33050 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) KUC3_33060 PF01270 Glycosyl hydrolases family 8 KUC3_33080 PF00535 Glycosyl transferase family 2 KUC3_33080 PF03170 Bacterial cellulose synthase subunit KUC3_33080 PF03552 Cellulose synthase KUC3_33080 PF07238 PilZ domain KUC3_33110 PF13460 NAD(P)H-binding KUC3_33120 PF00326 Prolyl oligopeptidase family KUC3_33120 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region KUC3_33130 PF00082 Subtilase family KUC3_33140 PF08000 Bacterial PH domain KUC3_33150 PF08448 PAS fold KUC3_33150 PF00563 EAL domain KUC3_33150 PF00990 Diguanylate cyclase, GGDEF domain KUC3_33160 PF00291 Pyridoxal-phosphate dependent enzyme KUC3_33170 PF07969 Amidohydrolase family KUC3_33190 PF00753 Metallo-beta-lactamase superfamily KUC3_33210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_33210 PF03466 LysR substrate binding domain KUC3_33220 PF13230 Glutamine amidotransferases class-II KUC3_33240 PF05360 yiaA/B two helix domain KUC3_33280 PF09905 DNA-binding protein VF530 KUC3_33290 PF00753 Metallo-beta-lactamase superfamily KUC3_33310 PF11798 IMS family HHH motif KUC3_33310 PF11799 impB/mucB/samB family C-terminal domain KUC3_33310 PF00817 impB/mucB/samB family KUC3_33330 PF02424 ApbE family KUC3_33340 PF00111 2Fe-2S iron-sulfur cluster binding domain KUC3_33340 PF00970 Oxidoreductase FAD-binding domain KUC3_33340 PF00175 Oxidoreductase NAD-binding domain KUC3_33350 PF02508 Rnf-Nqr subunit, membrane protein KUC3_33360 PF02508 Rnf-Nqr subunit, membrane protein KUC3_33370 PF04205 FMN-binding domain KUC3_33380 PF03116 NQR2, RnfD, RnfE family KUC3_33390 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) KUC3_33390 PF11973 NQRA C-terminal domain KUC3_33400 PF12241 Trans-2-enoyl-CoA reductase catalytic region KUC3_33400 PF07055 Enoyl reductase FAD binding domain KUC3_33400 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase KUC3_33410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KUC3_33410 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KUC3_33420 PF00311 Phosphoenolpyruvate carboxylase KUC3_33460 PF00056 lactate/malate dehydrogenase, NAD binding domain KUC3_33460 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KUC3_33470 PF01316 Arginine repressor, DNA binding domain KUC3_33470 PF02863 Arginine repressor, C-terminal domain KUC3_33490 PF00593 TonB dependent receptor KUC3_33520 PF00485 Phosphoribulokinase / Uridine kinase family KUC3_33530 PF07670 Nucleoside recognition KUC3_33530 PF01773 Na+ dependent nucleoside transporter N-terminus KUC3_33530 PF07662 Na+ dependent nucleoside transporter C-terminus KUC3_33580 PF00571 CBS domain KUC3_33580 PF01380 SIS domain KUC3_33590 PF00474 Sodium:solute symporter family KUC3_33610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_33610 PF00512 His Kinase A (phospho-acceptor) domain KUC3_33610 PF09456 RcsC Alpha-Beta-Loop (ABL) KUC3_33610 PF00072 Response regulator receiver domain KUC3_33630 PF08443 RimK-like ATP-grasp domain KUC3_33630 PF18030 RimK PreATP-grasp domain KUC3_33650 PF18030 RimK PreATP-grasp domain KUC3_33650 PF08443 RimK-like ATP-grasp domain KUC3_33670 PF00072 Response regulator receiver domain KUC3_33670 PF00196 Bacterial regulatory proteins, luxR family KUC3_33680 PF16177 Acetyl-coenzyme A synthetase N-terminus KUC3_33680 PF00501 AMP-binding enzyme KUC3_33680 PF13193 AMP-binding enzyme C-terminal domain KUC3_33700 PF02690 Na+/Pi-cotransporter KUC3_33710 PF00248 Aldo/keto reductase family KUC3_33750 PF00563 EAL domain KUC3_33750 PF03707 Bacterial signalling protein N terminal repeat KUC3_33750 PF00990 Diguanylate cyclase, GGDEF domain KUC3_33760 PF00009 Elongation factor Tu GTP binding domain KUC3_33760 PF03144 Elongation factor Tu domain 2 KUC3_33760 PF03143 Elongation factor Tu C-terminal domain KUC3_33770 PF03309 Type III pantothenate kinase KUC3_33780 PF02237 Biotin protein ligase C terminal domain KUC3_33780 PF08279 HTH domain KUC3_33780 PF03099 Biotin/lipoate A/B protein ligase family KUC3_33790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KUC3_33790 PF01565 FAD binding domain KUC3_33800 PF12729 Four helix bundle sensory module for signal transduction KUC3_33800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_33800 PF00672 HAMP domain KUC3_33840 PF00005 ABC transporter KUC3_33840 PF03412 Peptidase C39 family KUC3_33840 PF00664 ABC transporter transmembrane region KUC3_33850 PF03466 LysR substrate binding domain KUC3_33850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_33870 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KUC3_33870 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KUC3_33870 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KUC3_33880 PF00535 Glycosyl transferase family 2 KUC3_33890 PF16363 GDP-mannose 4,6 dehydratase KUC3_33900 PF04321 RmlD substrate binding domain KUC3_33910 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase KUC3_33920 PF00483 Nucleotidyl transferase KUC3_33970 PF00535 Glycosyl transferase family 2 KUC3_33970 PF01501 Glycosyl transferase family 8 KUC3_33990 PF00535 Glycosyl transferase family 2 KUC3_34090 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KUC3_34090 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KUC3_34090 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KUC3_34100 PF02350 UDP-N-acetylglucosamine 2-epimerase KUC3_34140 PF01196 Ribosomal protein L17 KUC3_34150 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KUC3_34150 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KUC3_34150 PF01000 RNA polymerase Rpb3/RpoA insert domain KUC3_34160 PF01479 S4 domain KUC3_34160 PF00163 Ribosomal protein S4/S9 N-terminal domain KUC3_34170 PF00411 Ribosomal protein S11 KUC3_34180 PF00416 Ribosomal protein S13/S18 KUC3_34190 PF00344 SecY translocase KUC3_34200 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KUC3_34210 PF00327 Ribosomal protein L30p/L7e KUC3_34220 PF00333 Ribosomal protein S5, N-terminal domain KUC3_34220 PF03719 Ribosomal protein S5, C-terminal domain KUC3_34230 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KUC3_34240 PF00347 Ribosomal protein L6 KUC3_34250 PF00410 Ribosomal protein S8 KUC3_34260 PF00253 Ribosomal protein S14p/S29e KUC3_34270 PF00281 Ribosomal protein L5 KUC3_34270 PF00673 ribosomal L5P family C-terminus KUC3_34280 PF00467 KOW motif KUC3_34280 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KUC3_34290 PF00238 Ribosomal protein L14p/L23e KUC3_34300 PF00072 Response regulator receiver domain KUC3_34300 PF00512 His Kinase A (phospho-acceptor) domain KUC3_34300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_34300 PF09308 LuxQ, periplasmic KUC3_34320 PF00082 Subtilase family KUC3_34320 PF05922 Peptidase inhibitor I9 KUC3_34330 PF08032 RNA 2'-O ribose methyltransferase substrate binding KUC3_34330 PF00588 SpoU rRNA Methylase family KUC3_34340 PF00773 RNB domain KUC3_34340 PF00575 S1 RNA binding domain KUC3_34340 PF17876 Cold shock domain KUC3_34340 PF08461 Ribonuclease R winged-helix domain KUC3_34340 PF08206 Ribonuclease B OB domain KUC3_34350 PF09423 PhoD-like phosphatase KUC3_34350 PF16655 PhoD-like phosphatase, N-terminal domain KUC3_34390 PF08238 Sel1 repeat KUC3_34410 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KUC3_34420 PF00970 Oxidoreductase FAD-binding domain KUC3_34420 PF00175 Oxidoreductase NAD-binding domain KUC3_34430 PF04389 Peptidase family M28 KUC3_34430 PF04151 Bacterial pre-peptidase C-terminal domain KUC3_34490 PF09411 Lipid A 3-O-deacylase (PagL) KUC3_34510 PF00512 His Kinase A (phospho-acceptor) domain KUC3_34510 PF01590 GAF domain KUC3_34510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_34510 PF08446 PAS fold KUC3_34510 PF00360 Phytochrome region KUC3_34550 PF08448 PAS fold KUC3_34550 PF00990 Diguanylate cyclase, GGDEF domain KUC3_34580 PF13673 Acetyltransferase (GNAT) domain KUC3_34580 PF04229 GrpB protein KUC3_34610 PF03466 LysR substrate binding domain KUC3_34610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_34650 PF01654 Cytochrome bd terminal oxidase subunit I KUC3_34660 PF02322 Cytochrome bd terminal oxidase subunit II KUC3_34680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_34680 PF08447 PAS fold KUC3_34680 PF13426 PAS domain KUC3_34690 PF13404 AsnC-type helix-turn-helix domain KUC3_34690 PF01037 Lrp/AsnC ligand binding domain KUC3_34710 PF00313 'Cold-shock' DNA-binding domain KUC3_34720 PF03109 ABC1 family KUC3_34740 PF01209 ubiE/COQ5 methyltransferase family KUC3_34760 PF01432 Peptidase family M3 KUC3_34770 PF00072 Response regulator receiver domain KUC3_34790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_34790 PF00497 Bacterial extracellular solute-binding proteins, family 3 KUC3_34790 PF00512 His Kinase A (phospho-acceptor) domain KUC3_34800 PF00158 Sigma-54 interaction domain KUC3_34800 PF00072 Response regulator receiver domain KUC3_34800 PF02954 Bacterial regulatory protein, Fis family KUC3_34810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KUC3_34810 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_34820 PF00072 Response regulator receiver domain KUC3_34840 PF07676 WD40-like Beta Propeller Repeat KUC3_34840 PF00326 Prolyl oligopeptidase family KUC3_34900 PF00004 ATPase family associated with various cellular activities (AAA) KUC3_34900 PF07724 AAA domain (Cdc48 subfamily) KUC3_34910 PF00227 Proteasome subunit KUC3_34920 PF00313 'Cold-shock' DNA-binding domain KUC3_34960 PF05036 Sporulation related domain KUC3_34970 PF00270 DEAD/DEAH box helicase KUC3_34970 PF00271 Helicase conserved C-terminal domain KUC3_34970 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KUC3_34970 PF18074 Primosomal protein N C-terminal domain KUC3_34970 PF17764 3′ DNA-binding domain (3′BD) KUC3_34980 PF01197 Ribosomal protein L31 KUC3_35000 PF03949 Malic enzyme, NAD binding domain KUC3_35000 PF00390 Malic enzyme, N-terminal domain KUC3_35010 PF01340 Met Apo-repressor, MetJ KUC3_35020 PF02219 Methylenetetrahydrofolate reductase KUC3_35030 PF03631 Virulence factor BrkB KUC3_35060 PF00561 alpha/beta hydrolase fold KUC3_35070 PF02580 D-Tyr-tRNA(Tyr) deacylase KUC3_35080 PF00583 Acetyltransferase (GNAT) family KUC3_35080 PF09500 Putative thioesterase (yiiD_Cterm) KUC3_35090 PF04542 Sigma-70 region 2 KUC3_35090 PF04545 Sigma-70, region 4 KUC3_35090 PF00140 Sigma-70 factor, region 1.2 KUC3_35100 PF08668 HDOD domain KUC3_35100 PF00563 EAL domain KUC3_35110 PF08668 HDOD domain KUC3_35110 PF00563 EAL domain KUC3_35120 PF18075 FtsX extracellular domain KUC3_35130 PF00005 ABC transporter KUC3_35140 PF02881 SRP54-type protein, helical bundle domain KUC3_35140 PF00448 SRP54-type protein, GTPase domain KUC3_35170 PF01914 MarC family integral membrane protein KUC3_35190 PF00883 Cytosol aminopeptidase family, catalytic domain KUC3_35190 PF12404 Peptidase KUC3_35200 PF03749 Sugar fermentation stimulation protein RE domain KUC3_35200 PF17746 SfsA N-terminal OB domain KUC3_35210 PF01258 Prokaryotic dksA/traR C4-type zinc finger KUC3_35220 PF00749 tRNA synthetases class I (E and Q), catalytic domain KUC3_35230 PF12626 Polymerase A arginine-rich C-terminus KUC3_35230 PF01743 Poly A polymerase head domain KUC3_35230 PF12627 Probable RNA and SrmB- binding site of polymerase A KUC3_35240 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KUC3_35250 PF02548 Ketopantoate hydroxymethyltransferase KUC3_35260 PF02569 Pantoate-beta-alanine ligase KUC3_35270 PF00282 Pyridoxal-dependent decarboxylase conserved domain KUC3_35300 PF01061 ABC-2 type transporter KUC3_35310 PF00005 ABC transporter KUC3_35320 PF02627 Carboxymuconolactone decarboxylase family KUC3_35340 PF00486 Transcriptional regulatory protein, C terminal KUC3_35340 PF00072 Response regulator receiver domain KUC3_35350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_35350 PF00512 His Kinase A (phospho-acceptor) domain KUC3_35350 PF00672 HAMP domain KUC3_35360 PF00593 TonB dependent receptor KUC3_35360 PF07715 TonB-dependent Receptor Plug Domain KUC3_35370 PF18331 PKHD-type hydroxylase C-terminal domain KUC3_35370 PF13640 2OG-Fe(II) oxygenase superfamily KUC3_35410 PF01595 Cyclin M transmembrane N-terminal domain KUC3_35410 PF00571 CBS domain KUC3_35420 PF03773 Predicted permease KUC3_35430 PF13722 5TM C-terminal transporter carbon starvation CstA KUC3_35430 PF02554 Carbon starvation protein CstA KUC3_35440 PF00175 Oxidoreductase NAD-binding domain KUC3_35440 PF00667 FAD binding domain KUC3_35440 PF00258 Flavodoxin KUC3_35500 PF02472 Biopolymer transport protein ExbD/TolR KUC3_35520 PF01618 MotA/TolQ/ExbB proton channel family KUC3_35540 PF07859 alpha/beta hydrolase fold KUC3_35570 PF01638 HxlR-like helix-turn-helix KUC3_35580 PF00009 Elongation factor Tu GTP binding domain KUC3_35580 PF03144 Elongation factor Tu domain 2 KUC3_35580 PF03143 Elongation factor Tu C-terminal domain KUC3_35590 PF03144 Elongation factor Tu domain 2 KUC3_35590 PF00679 Elongation factor G C-terminus KUC3_35590 PF00009 Elongation factor Tu GTP binding domain KUC3_35590 PF14492 Elongation Factor G, domain II KUC3_35590 PF03764 Elongation factor G, domain IV KUC3_35600 PF00177 Ribosomal protein S7p/S5e KUC3_35610 PF00164 Ribosomal protein S12/S23 KUC3_35620 PF00623 RNA polymerase Rpb1, domain 2 KUC3_35620 PF05000 RNA polymerase Rpb1, domain 4 KUC3_35620 PF04998 RNA polymerase Rpb1, domain 5 KUC3_35620 PF04997 RNA polymerase Rpb1, domain 1 KUC3_35620 PF04983 RNA polymerase Rpb1, domain 3 KUC3_35630 PF04563 RNA polymerase beta subunit KUC3_35630 PF04561 RNA polymerase Rpb2, domain 2 KUC3_35630 PF04560 RNA polymerase Rpb2, domain 7 KUC3_35630 PF00562 RNA polymerase Rpb2, domain 6 KUC3_35630 PF10385 RNA polymerase beta subunit external 1 domain KUC3_35630 PF04565 RNA polymerase Rpb2, domain 3 KUC3_35640 PF16320 Ribosomal protein L7/L12 dimerisation domain KUC3_35640 PF00542 Ribosomal protein L7/L12 C-terminal domain KUC3_35650 PF00466 Ribosomal protein L10 KUC3_35660 PF00687 Ribosomal protein L1p/L10e family KUC3_35670 PF00298 Ribosomal protein L11, RNA binding domain KUC3_35670 PF03946 Ribosomal protein L11, N-terminal domain KUC3_35700 PF02357 Transcription termination factor nusG KUC3_35700 PF00467 KOW motif KUC3_35710 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KUC3_35720 PF00664 ABC transporter transmembrane region KUC3_35720 PF00005 ABC transporter KUC3_35740 PF03737 Aldolase/RraA KUC3_35750 PF01431 Peptidase family M13 KUC3_35750 PF05649 Peptidase family M13 KUC3_35780 PF00271 Helicase conserved C-terminal domain KUC3_35780 PF00270 DEAD/DEAH box helicase KUC3_35780 PF03880 DbpA RNA binding domain KUC3_35800 PF01979 Amidohydrolase family KUC3_35810 PF08212 Lipocalin-like domain KUC3_35820 PF00248 Aldo/keto reductase family KUC3_35830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KUC3_35840 PF00924 Mechanosensitive ion channel KUC3_35850 PF07690 Major Facilitator Superfamily KUC3_35860 PF00128 Alpha amylase, catalytic domain KUC3_35880 PF01227 GTP cyclohydrolase I KUC3_35900 PF04371 Porphyromonas-type peptidyl-arginine deiminase KUC3_35910 PF00795 Carbon-nitrogen hydrolase KUC3_35930 PF08494 DEAD/H associated KUC3_35930 PF00271 Helicase conserved C-terminal domain KUC3_35930 PF00270 DEAD/DEAH box helicase KUC3_35950 PF04675 DNA ligase N terminus KUC3_35950 PF04679 ATP dependent DNA ligase C terminal region KUC3_35950 PF01068 ATP dependent DNA ligase domain KUC3_35960 PF00294 pfkB family carbohydrate kinase KUC3_35990 PF03466 LysR substrate binding domain KUC3_35990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_36000 PF00326 Prolyl oligopeptidase family KUC3_36010 PF02798 Glutathione S-transferase, N-terminal domain KUC3_36010 PF00043 Glutathione S-transferase, C-terminal domain KUC3_36020 PF02798 Glutathione S-transferase, N-terminal domain KUC3_36040 PF00561 alpha/beta hydrolase fold KUC3_36070 PF00171 Aldehyde dehydrogenase family KUC3_36080 PF00205 Thiamine pyrophosphate enzyme, central domain KUC3_36080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KUC3_36080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KUC3_36100 PF00762 Ferrochelatase KUC3_36110 PF03806 AbgT putative transporter family KUC3_36120 PF01145 SPFH domain / Band 7 family KUC3_36130 PF01145 SPFH domain / Band 7 family KUC3_36130 PF12221 Bacterial membrane protein N terminal KUC3_36140 PF16360 GTP-binding GTPase Middle Region KUC3_36140 PF13167 GTP-binding GTPase N-terminal KUC3_36140 PF01926 50S ribosome-binding GTPase KUC3_36150 PF17209 Hfq protein KUC3_36170 PF08676 MutL C terminal dimerisation domain KUC3_36170 PF01119 DNA mismatch repair protein, C-terminal domain KUC3_36180 PF01520 N-acetylmuramoyl-L-alanine amidase KUC3_36190 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KUC3_36200 PF01256 Carbohydrate kinase KUC3_36200 PF03853 YjeF-related protein N-terminus KUC3_36210 PF08331 Domain of unknown function (DUF1730) KUC3_36230 PF01208 Uroporphyrinogen decarboxylase (URO-D) KUC3_36240 PF09297 NADH pyrophosphatase zinc ribbon domain KUC3_36240 PF00293 NUDIX domain KUC3_36250 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ KUC3_36260 PF01475 Ferric uptake regulator family KUC3_36280 PF01894 Uncharacterised protein family UPF0047 KUC3_36290 PF00691 OmpA family KUC3_36290 PF05736 OprF membrane domain KUC3_36300 PF03796 DnaB-like helicase C terminal domain KUC3_36300 PF00772 DnaB-like helicase N terminal domain KUC3_36350 PF03473 MOSC domain KUC3_36350 PF03475 3-alpha domain KUC3_36390 PF00873 AcrB/AcrD/AcrF family KUC3_36400 PF03948 Ribosomal protein L9, C-terminal domain KUC3_36400 PF01281 Ribosomal protein L9, N-terminal domain KUC3_36410 PF01084 Ribosomal protein S18 KUC3_36420 PF01250 Ribosomal protein S6 KUC3_36440 PF00005 ABC transporter KUC3_36440 PF02687 FtsX-like permease family KUC3_36440 PF12704 MacB-like periplasmic core domain KUC3_36460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_36460 PF08447 PAS fold KUC3_36470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_36470 PF00512 His Kinase A (phospho-acceptor) domain KUC3_36470 PF00989 PAS fold KUC3_36470 PF13426 PAS domain KUC3_36470 PF13188 PAS domain KUC3_36480 PF12729 Four helix bundle sensory module for signal transduction KUC3_36480 PF00672 HAMP domain KUC3_36480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KUC3_36510 PF03601 Conserved hypothetical protein 698 KUC3_36530 PF00248 Aldo/keto reductase family KUC3_36570 PF00474 Sodium:solute symporter family KUC3_36580 PF00593 TonB dependent receptor KUC3_36580 PF07715 TonB-dependent Receptor Plug Domain KUC3_36590 PF01545 Cation efflux family KUC3_36590 PF16916 Dimerisation domain of Zinc Transporter KUC3_36600 PF00722 Glycosyl hydrolases family 16 KUC3_36640 PF14310 Fibronectin type III-like domain KUC3_36640 PF00933 Glycosyl hydrolase family 3 N terminal domain KUC3_36640 PF01915 Glycosyl hydrolase family 3 C-terminal domain KUC3_36650 PF07690 Major Facilitator Superfamily KUC3_36660 PF00232 Glycosyl hydrolase family 1 KUC3_36670 PF00356 Bacterial regulatory proteins, lacI family KUC3_36680 PF00083 Sugar (and other) transporter KUC3_36690 PF00005 ABC transporter KUC3_36690 PF10649 Protein of unknown function (DUF2478) KUC3_36690 PF03459 TOBE domain KUC3_36700 PF00664 ABC transporter transmembrane region KUC3_36700 PF00005 ABC transporter KUC3_36710 PF02322 Cytochrome bd terminal oxidase subunit II KUC3_36720 PF01654 Cytochrome bd terminal oxidase subunit I KUC3_36730 PF02954 Bacterial regulatory protein, Fis family KUC3_36730 PF00158 Sigma-54 interaction domain KUC3_36780 PF13474 SnoaL-like domain KUC3_36790 PF00857 Isochorismatase family KUC3_36810 PF01979 Amidohydrolase family KUC3_36820 PF05726 Pirin C-terminal cupin domain KUC3_36820 PF02678 Pirin KUC3_36840 PF00593 TonB dependent receptor KUC3_36840 PF07715 TonB-dependent Receptor Plug Domain KUC3_36870 PF02649 Type I GTP cyclohydrolase folE2 KUC3_36950 PF01618 MotA/TolQ/ExbB proton channel family KUC3_37030 PF00578 AhpC/TSA family KUC3_37100 PF01590 GAF domain KUC3_37100 PF00563 EAL domain KUC3_37100 PF00990 Diguanylate cyclase, GGDEF domain KUC3_37100 PF00360 Phytochrome region KUC3_37110 PF02424 ApbE family KUC3_37180 PF05532 CsbD-like KUC3_37200 PF00472 RF-1 domain KUC3_37210 PF00561 alpha/beta hydrolase fold KUC3_37210 PF00364 Biotin-requiring enzyme KUC3_37260 PF01292 Prokaryotic cytochrome b561 KUC3_37270 PF04264 YceI-like domain KUC3_37280 PF07992 Pyridine nucleotide-disulphide oxidoreductase KUC3_37290 PF00593 TonB dependent receptor KUC3_37290 PF07715 TonB-dependent Receptor Plug Domain KUC3_37310 PF01048 Phosphorylase superfamily KUC3_37320 PF03466 LysR substrate binding domain KUC3_37320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_37330 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) KUC3_37340 PF00990 Diguanylate cyclase, GGDEF domain KUC3_37340 PF00563 EAL domain KUC3_37340 PF00360 Phytochrome region KUC3_37340 PF01590 GAF domain KUC3_37360 PF00989 PAS fold KUC3_37360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_37360 PF00512 His Kinase A (phospho-acceptor) domain KUC3_37370 PF00072 Response regulator receiver domain KUC3_37370 PF00158 Sigma-54 interaction domain KUC3_37370 PF02954 Bacterial regulatory protein, Fis family KUC3_37380 PF02687 FtsX-like permease family KUC3_37380 PF12704 MacB-like periplasmic core domain KUC3_37380 PF00005 ABC transporter KUC3_37390 PF02687 FtsX-like permease family KUC3_37390 PF00005 ABC transporter KUC3_37390 PF12704 MacB-like periplasmic core domain KUC3_37410 PF08448 PAS fold KUC3_37410 PF00990 Diguanylate cyclase, GGDEF domain KUC3_37410 PF00563 EAL domain KUC3_37430 PF00491 Arginase family KUC3_37440 PF01380 SIS domain KUC3_37450 PF08220 DeoR-like helix-turn-helix domain KUC3_37450 PF00455 DeoR C terminal sensor domain KUC3_37460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KUC3_37460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KUC3_37470 PF00132 Bacterial transferase hexapeptide (six repeats) KUC3_37470 PF14602 Hexapeptide repeat of succinyl-transferase KUC3_37470 PF12804 MobA-like NTP transferase domain KUC3_37480 PF07694 5TMR of 5TMR-LYT KUC3_37480 PF00990 Diguanylate cyclase, GGDEF domain KUC3_37500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KUC3_37500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KUC3_37510 PF02805 Metal binding domain of Ada KUC3_37510 PF00730 HhH-GPD superfamily base excision DNA repair protein KUC3_37510 PF12833 Helix-turn-helix domain KUC3_37510 PF06029 AlkA N-terminal domain KUC3_37520 PF00144 Beta-lactamase KUC3_37530 PF17810 Arginine decarboxylase helical bundle domain KUC3_37530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KUC3_37530 PF17944 Arginine decarboxylase C-terminal helical extension KUC3_37550 PF02233 NAD(P) transhydrogenase beta subunit KUC3_37560 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch KUC3_37570 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KUC3_37570 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KUC3_37590 PF04820 Tryptophan halogenase KUC3_37650 PF00593 TonB dependent receptor KUC3_37650 PF07715 TonB-dependent Receptor Plug Domain KUC3_37710 PF13426 PAS domain KUC3_37710 PF00563 EAL domain KUC3_37710 PF00990 Diguanylate cyclase, GGDEF domain KUC3_37730 PF03551 Transcriptional regulator PadR-like family KUC3_37810 PF02796 Helix-turn-helix domain of resolvase KUC3_37810 PF00239 Resolvase, N terminal domain KUC3_37850 PF00075 RNase H KUC3_37880 PF00118 TCP-1/cpn60 chaperonin family KUC3_37890 PF00166 Chaperonin 10 Kd subunit KUC3_37900 PF04186 FxsA cytoplasmic membrane protein KUC3_37910 PF03091 CutA1 divalent ion tolerance protein KUC3_37920 PF11412 Disulphide bond corrector protein DsbC KUC3_37920 PF02683 Cytochrome C biogenesis protein transmembrane region KUC3_37930 PF01551 Peptidase family M23 KUC3_37940 PF01220 Dehydroquinase class II KUC3_37950 PF00364 Biotin-requiring enzyme KUC3_37960 PF00289 Biotin carboxylase, N-terminal domain KUC3_37960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KUC3_37960 PF02785 Biotin carboxylase C-terminal domain KUC3_38020 PF11490 DNA polymerase III polC-type N-terminus II KUC3_38020 PF00929 Exonuclease KUC3_38020 PF14579 Helix-hairpin-helix motif KUC3_38020 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KUC3_38020 PF02811 PHP domain KUC3_38020 PF07733 Bacterial DNA polymerase III alpha NTPase domain KUC3_38050 PF01355 High potential iron-sulfur protein KUC3_38060 PF01425 Amidase KUC3_38090 PF01207 Dihydrouridine synthase (Dus) KUC3_38100 PF02954 Bacterial regulatory protein, Fis family KUC3_38110 PF02142 MGS-like domain KUC3_38110 PF01808 AICARFT/IMPCHase bienzyme KUC3_38130 PF02844 Phosphoribosylglycinamide synthetase, N domain KUC3_38130 PF02843 Phosphoribosylglycinamide synthetase, C domain KUC3_38130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KUC3_38150 PF00520 Ion transport protein KUC3_38150 PF00027 Cyclic nucleotide-binding domain KUC3_38160 PF00485 Phosphoribulokinase / Uridine kinase family KUC3_38190 PF00072 Response regulator receiver domain KUC3_38190 PF00486 Transcriptional regulatory protein, C terminal KUC3_38200 PF00672 HAMP domain KUC3_38200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KUC3_38200 PF00512 His Kinase A (phospho-acceptor) domain KUC3_38220 PF13802 Galactose mutarotase-like KUC3_38220 PF16338 Domain of unknown function (DUF4968) KUC3_38220 PF17137 Domain of unknown function (DUF5110) KUC3_38220 PF01055 Glycosyl hydrolases family 31 KUC3_38240 PF01293 Phosphoenolpyruvate carboxykinase KUC3_38250 PF01430 Hsp33 protein KUC3_38260 PF01479 S4 domain KUC3_38270 PF11356 Type II secretion system protein C KUC3_38280 PF00263 Bacterial type II and III secretion system protein KUC3_38280 PF03958 Bacterial type II/III secretion system short domain KUC3_38290 PF00437 Type II/IV secretion system protein KUC3_38300 PF00482 Type II secretion system (T2SS), protein F KUC3_38310 PF08334 Type II secretion system (T2SS), protein G KUC3_38310 PF07963 Prokaryotic N-terminal methylation motif KUC3_38320 PF12019 Type II transport protein GspH KUC3_38330 PF02501 Type II secretion system (T2SS), protein I KUC3_38330 PF07963 Prokaryotic N-terminal methylation motif KUC3_38340 PF07963 Prokaryotic N-terminal methylation motif KUC3_38340 PF11612 Type II secretion system (T2SS), protein J KUC3_38360 PF12693 GspL periplasmic domain KUC3_38360 PF05134 Type II secretion system (T2SS), protein L KUC3_38370 PF04612 Type II secretion system (T2SS), protein M KUC3_38400 PF12706 Beta-lactamase superfamily domain KUC3_38410 PF00171 Aldehyde dehydrogenase family KUC3_38420 PF01931 Protein of unknown function DUF84 KUC3_38430 PF13419 Haloacid dehalogenase-like hydrolase KUC3_38440 PF00293 NUDIX domain KUC3_38450 PF00459 Inositol monophosphatase family KUC3_38470 PF00535 Glycosyl transferase family 2 KUC3_38480 PF04349 Periplasmic glucan biosynthesis protein, MdoG KUC3_38500 PF06794 Uncharacterised protein family (UPF0270) KUC3_38510 PF00561 alpha/beta hydrolase fold KUC3_38530 PF12848 ABC transporter KUC3_38530 PF00005 ABC transporter KUC3_38590 PF04102 SlyX KUC3_38610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KUC3_38610 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase KUC3_38630 PF01272 Transcription elongation factor, GreA/GreB, C-term KUC3_38630 PF03449 Transcription elongation factor, N-terminal KUC3_38640 PF16921 Tex protein YqgF-like domain KUC3_38640 PF17674 HHH domain KUC3_38640 PF09371 Tex-like protein N-terminal domain KUC3_38640 PF00575 S1 RNA binding domain KUC3_38670 PF00561 alpha/beta hydrolase fold KUC3_38680 PF00156 Phosphoribosyl transferase domain KUC3_38700 PF01521 Iron-sulphur cluster biosynthesis KUC3_38700 PF01106 NifU-like domain KUC3_38710 PF01177 Asp/Glu/Hydantoin racemase KUC3_38740 PF01554 MatE KUC3_38760 PF01522 Polysaccharide deacetylase KUC3_38760 PF14883 Hypothetical glycosyl hydrolase family 13 KUC3_38780 PF02630 SCO1/SenC KUC3_38790 PF01040 UbiA prenyltransferase family KUC3_38800 PF02628 Cytochrome oxidase assembly protein KUC3_38840 PF00510 Cytochrome c oxidase subunit III KUC3_38850 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 KUC3_38860 PF00115 Cytochrome C and Quinol oxidase polypeptide I KUC3_38870 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KUC3_38870 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KUC3_38880 PF00717 Peptidase S24-like KUC3_38880 PF01726 LexA DNA binding domain KUC3_38900 PF01553 Acyltransferase KUC3_38910 PF00291 Pyridoxal-phosphate dependent enzyme KUC3_38910 PF00585 C-terminal regulatory domain of Threonine dehydratase KUC3_38920 PF00920 Dehydratase family KUC3_38930 PF03458 UPF0126 domain KUC3_38940 PF01078 Magnesium chelatase, subunit ChlI KUC3_38940 PF13335 Magnesium chelatase, subunit ChlI C-terminal KUC3_38950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KUC3_38950 PF03466 LysR substrate binding domain KUC3_38960 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KUC3_38960 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KUC3_39050 PF07690 Major Facilitator Superfamily KUC3_39060 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) KUC3_39070 PF01103 Surface antigen KUC3_39070 PF17243 POTRA domain TamA domain 1 KUC3_39070 PF07244 Surface antigen variable number repeat KUC3_39080 PF04357 TamB, inner membrane protein subunit of TAM complex KUC3_39100 PF04542 Sigma-70 region 2 KUC3_39100 PF08281 Sigma-70, region 4 KUC3_39130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KUC3_39130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KUC3_39150 PF01472 PUA domain KUC3_39150 PF00696 Amino acid kinase family KUC3_39190 PF03109 ABC1 family KUC3_39210 PF04116 Fatty acid hydroxylase superfamily KUC3_39240 PF01979 Amidohydrolase family KUC3_39290 PF01206 Sulfurtransferase TusA KUC3_39300 PF00156 Phosphoribosyl transferase domain KUC3_39310 PF01138 3' exoribonuclease family, domain 1 KUC3_39310 PF03725 3' exoribonuclease family, domain 2 KUC3_39320 PF08340 Domain of unknown function (DUF1732) KUC3_39320 PF03755 YicC-like family, N-terminal region KUC3_39380 PF00145 C-5 cytosine-specific DNA methylase KUC3_39390 PF13491 4TM region of DNA translocase FtsK/SpoIIIE KUC3_39390 PF01580 FtsK/SpoIIIE family KUC3_39390 PF09397 Ftsk gamma domain KUC3_39390 PF17854 FtsK alpha domain KUC3_39440 PF04820 Tryptophan halogenase KUC3_39460 PF04820 Tryptophan halogenase KUC3_39490 PF04820 Tryptophan halogenase KUC3_39500 PF04820 Tryptophan halogenase KUC3_39520 PF00232 Glycosyl hydrolase family 1 KUC3_39540 PF00356 Bacterial regulatory proteins, lacI family KUC3_39560 PF05736 OprF membrane domain KUC3_39560 PF00691 OmpA family KUC3_39570 PF01966 HD domain KUC3_39580 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KUC3_39580 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KUC3_39600 PF00043 Glutathione S-transferase, C-terminal domain KUC3_39600 PF02798 Glutathione S-transferase, N-terminal domain KUC3_39620 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KUC3_39620 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KUC3_39630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KUC3_39630 PF02874 ATP synthase alpha/beta family, beta-barrel domain KUC3_39640 PF00231 ATP synthase KUC3_39650 PF00306 ATP synthase alpha/beta chain, C terminal domain KUC3_39650 PF02874 ATP synthase alpha/beta family, beta-barrel domain KUC3_39650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KUC3_39660 PF00213 ATP synthase delta (OSCP) subunit KUC3_39670 PF00430 ATP synthase B/B' CF(0) KUC3_39680 PF00137 ATP synthase subunit C KUC3_39690 PF00119 ATP synthase A chain KUC3_39710 PF17762 HTH domain found in ParB protein KUC3_39710 PF02195 ParB-like nuclease domain KUC3_39720 PF13614 AAA domain KUC3_39730 PF02527 rRNA small subunit methyltransferase G KUC3_39740 PF13932 GidA associated domain KUC3_39740 PF01134 Glucose inhibited division protein A KUC3_39750 PF16326 ABC transporter C-terminal domain KUC3_39750 PF12848 ABC transporter KUC3_39750 PF00005 ABC transporter KUC3_39780 PF00258 Flavodoxin KUC3_39790 PF10396 GTP-binding protein TrmE N-terminus KUC3_39790 PF12631 MnmE helical domain KUC3_39790 PF01926 50S ribosome-binding GTPase KUC3_39830 PF00239 Resolvase, N terminal domain KUC3_39830 PF02796 Helix-turn-helix domain of resolvase KUC3_39850 PF04461 Protein of unknown function (DUF520) KUC3_39860 PF14849 YidC periplasmic domain KUC3_39860 PF02096 60Kd inner membrane protein KUC3_39870 PF01809 Putative membrane protein insertion efficiency factor KUC3_39880 PF00825 Ribonuclease P