locus-tag class description NLG07_00050 PF08443 RimK-like ATP-grasp domain NLG07_00050 PF18030 RimK PreATP-grasp domain NLG07_00060 PF08443 RimK-like ATP-grasp domain NLG07_00060 PF18030 RimK PreATP-grasp domain NLG07_00065 PF00892 EamA-like transporter family NLG07_00075 PF01467 Cytidylyltransferase-like NLG07_00075 PF00294 pfkB family carbohydrate kinase NLG07_00085 PF08335 GlnD PII-uridylyltransferase NLG07_00085 PF03710 Glutamate-ammonia ligase adenylyltransferase NLG07_00090 PF03279 Bacterial lipid A biosynthesis acyltransferase NLG07_00095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NLG07_00095 PF00072 Response regulator receiver domain NLG07_00095 PF01627 Hpt domain NLG07_00095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_00095 PF00672 HAMP domain NLG07_00095 PF00512 His Kinase A (phospho-acceptor) domain NLG07_00105 PF02770 Acyl-CoA dehydrogenase, middle domain NLG07_00105 PF09317 Domain of unknown function (DUF1974) NLG07_00105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NLG07_00105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NLG07_00110 PF00265 Thymidine kinase NLG07_00115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NLG07_00115 PF02770 Acyl-CoA dehydrogenase, middle domain NLG07_00115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NLG07_00125 PF00106 short chain dehydrogenase NLG07_00130 PF01758 Sodium Bile acid symporter family NLG07_00140 PF07244 Surface antigen variable number repeat NLG07_00140 PF17243 POTRA domain TamA domain 1 NLG07_00140 PF01103 Surface antigen NLG07_00145 PF04357 TamB, inner membrane protein subunit of TAM complex NLG07_00150 PF01894 Uncharacterised protein family UPF0047 NLG07_00160 PF07969 Amidohydrolase family NLG07_00165 PF01370 NAD dependent epimerase/dehydratase family NLG07_00165 PF02222 ATP-grasp domain NLG07_00170 PF00005 ABC transporter NLG07_00170 PF12848 ABC transporter NLG07_00175 PF02347 Glycine cleavage system P-protein NLG07_00180 PF01597 Glycine cleavage H-protein NLG07_00185 PF08669 Glycine cleavage T-protein C-terminal barrel domain NLG07_00185 PF01571 Aminomethyltransferase folate-binding domain NLG07_00190 PF03466 LysR substrate binding domain NLG07_00190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NLG07_00200 PF00850 Histone deacetylase domain NLG07_00220 PF00171 Aldehyde dehydrogenase family NLG07_00230 PF01709 Transcriptional regulator NLG07_00235 PF03969 AFG1-like ATPase NLG07_00245 PF13180 PDZ domain NLG07_00245 PF00595 PDZ domain NLG07_00250 PF13180 PDZ domain NLG07_00255 PF00293 NUDIX domain NLG07_00260 PF00072 Response regulator receiver domain NLG07_00260 PF00989 PAS fold NLG07_00260 PF01627 Hpt domain NLG07_00260 PF18415 Histidine kinase receptor ArcB trans-membrane domain NLG07_00260 PF00512 His Kinase A (phospho-acceptor) domain NLG07_00260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_00265 PF01645 Conserved region in glutamate synthase NLG07_00265 PF04898 Glutamate synthase central domain NLG07_00265 PF00310 Glutamine amidotransferases class-II NLG07_00265 PF01493 GXGXG motif NLG07_00270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NLG07_00270 PF07992 Pyridine nucleotide-disulphide oxidoreductase NLG07_00275 PF01048 Phosphorylase superfamily NLG07_00285 PF00579 tRNA synthetases class I (W and Y) NLG07_00295 PF03702 Anhydro-N-acetylmuramic acid kinase NLG07_00300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NLG07_00300 PF11890 Domain of unknown function (DUF3410) NLG07_00300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NLG07_00310 PF01521 Iron-sulphur cluster biosynthesis NLG07_00320 PF00654 Voltage gated chloride channel NLG07_00325 PF03653 Uncharacterised protein family (UPF0093) NLG07_00330 PF00155 Aminotransferase class I and II NLG07_00340 PF00009 Elongation factor Tu GTP binding domain NLG07_00340 PF03144 Elongation factor Tu domain 2 NLG07_00340 PF00679 Elongation factor G C-terminus NLG07_00345 PF03951 Glutamine synthetase, beta-Grasp domain NLG07_00345 PF00120 Glutamine synthetase, catalytic domain NLG07_00350 PF00989 PAS fold NLG07_00350 PF00512 His Kinase A (phospho-acceptor) domain NLG07_00350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_00355 PF00158 Sigma-54 interaction domain NLG07_00355 PF00072 Response regulator receiver domain NLG07_00355 PF02954 Bacterial regulatory protein, Fis family NLG07_00360 PF01553 Acyltransferase NLG07_00365 PF06877 Regulator of ribonuclease activity B NLG07_00370 PF08264 Anticodon-binding domain of tRNA NLG07_00370 PF00133 tRNA synthetases class I (I, L, M and V) NLG07_00370 PF10458 Valyl tRNA synthetase tRNA binding arm NLG07_00375 PF04364 DNA polymerase III chi subunit, HolC NLG07_00380 PF02789 Cytosol aminopeptidase family, N-terminal domain NLG07_00380 PF00883 Cytosol aminopeptidase family, catalytic domain NLG07_00385 PF03739 Lipopolysaccharide export system permease LptF/LptG NLG07_00390 PF03739 Lipopolysaccharide export system permease LptF/LptG NLG07_00405 PF00593 TonB dependent receptor NLG07_00405 PF07715 TonB-dependent Receptor Plug Domain NLG07_00415 PF04303 PrpF protein NLG07_00420 PF00330 Aconitase family (aconitate hydratase) NLG07_00420 PF00694 Aconitase C-terminal domain NLG07_00425 PF00285 Citrate synthase, C-terminal domain NLG07_00450 PF02833 DHHA2 domain NLG07_00450 PF01368 DHH family NLG07_00470 PF00589 Phage integrase family NLG07_00470 PF13356 Arm DNA-binding domain NLG07_00550 PF00072 Response regulator receiver domain NLG07_00550 PF00486 Transcriptional regulatory protein, C terminal NLG07_00555 PF00672 HAMP domain NLG07_00555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_00555 PF00512 His Kinase A (phospho-acceptor) domain NLG07_00590 PF01661 Macro domain NLG07_00595 PF01037 Lrp/AsnC ligand binding domain NLG07_00600 PF00107 Zinc-binding dehydrogenase NLG07_00600 PF08240 Alcohol dehydrogenase GroES-like domain NLG07_00625 PF01758 Sodium Bile acid symporter family NLG07_00640 PF13192 Thioredoxin domain NLG07_00640 PF07992 Pyridine nucleotide-disulphide oxidoreductase NLG07_00645 PF00578 AhpC/TSA family NLG07_00645 PF10417 C-terminal domain of 1-Cys peroxiredoxin NLG07_00655 PF15461 Beta-carotene 15,15'-dioxygenase NLG07_00670 PF01593 Flavin containing amine oxidoreductase NLG07_00680 PF00326 Prolyl oligopeptidase family NLG07_00680 PF07676 WD40-like Beta Propeller Repeat NLG07_00730 PF05958 tRNA (Uracil-5-)-methyltransferase NLG07_00735 PF00440 Bacterial regulatory proteins, tetR family NLG07_00755 PF01507 Phosphoadenosine phosphosulfate reductase family NLG07_00760 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NLG07_00760 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NLG07_00765 PF00175 Oxidoreductase NAD-binding domain NLG07_00765 PF00667 FAD binding domain NLG07_00765 PF00258 Flavodoxin NLG07_00790 PF01207 Dihydrouridine synthase (Dus) NLG07_00800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NLG07_00800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NLG07_00805 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NLG07_00810 PF02233 NAD(P) transhydrogenase beta subunit NLG07_00815 PF01553 Acyltransferase NLG07_00820 PF00924 Mechanosensitive ion channel NLG07_00835 PF01370 NAD dependent epimerase/dehydratase family NLG07_00840 PF00209 Sodium:neurotransmitter symporter family NLG07_00855 PF01625 Peptide methionine sulfoxide reductase NLG07_00860 PF00571 CBS domain NLG07_00860 PF01769 Divalent cation transporter NLG07_00860 PF03448 MgtE intracellular N domain NLG07_00865 PF00381 PTS HPr component phosphorylation site NLG07_00870 PF03668 P-loop ATPase protein family NLG07_00875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NLG07_00880 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NLG07_00885 PF04963 Sigma-54 factor, core binding domain NLG07_00885 PF00309 Sigma-54 factor, Activator interacting domain (AID) NLG07_00885 PF04552 Sigma-54, DNA binding domain NLG07_00890 PF00005 ABC transporter NLG07_00890 PF12399 Branched-chain amino acid ATP-binding cassette transporter NLG07_00910 PF01380 SIS domain NLG07_00910 PF00571 CBS domain NLG07_00915 PF01699 Sodium/calcium exchanger protein NLG07_00920 PF00005 ABC transporter NLG07_00925 PF02405 Permease MlaE NLG07_00930 PF02470 MlaD protein NLG07_00935 PF05494 MlaC protein NLG07_00945 PF01722 BolA-like protein NLG07_00950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NLG07_00965 PF00258 Flavodoxin NLG07_00975 PF02472 Biopolymer transport protein ExbD/TolR NLG07_00990 PF05175 Methyltransferase small domain NLG07_01000 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region NLG07_01000 PF00326 Prolyl oligopeptidase family NLG07_01005 PF08000 Bacterial PH domain NLG07_01010 PF13291 ACT domain NLG07_01010 PF00291 Pyridoxal-phosphate dependent enzyme NLG07_01015 PF01293 Phosphoenolpyruvate carboxykinase NLG07_01020 PF00248 Aldo/keto reductase family NLG07_01025 PF00535 Glycosyl transferase family 2 NLG07_01030 PF11798 IMS family HHH motif NLG07_01030 PF11799 impB/mucB/samB family C-terminal domain NLG07_01030 PF00817 impB/mucB/samB family NLG07_01040 PF02424 ApbE family NLG07_01045 PF00970 Oxidoreductase FAD-binding domain NLG07_01045 PF00175 Oxidoreductase NAD-binding domain NLG07_01045 PF00111 2Fe-2S iron-sulfur cluster binding domain NLG07_01050 PF02508 Rnf-Nqr subunit, membrane protein NLG07_01055 PF02508 Rnf-Nqr subunit, membrane protein NLG07_01060 PF04205 FMN-binding domain NLG07_01065 PF03116 NQR2, RnfD, RnfE family NLG07_01070 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NLG07_01070 PF11973 NQRA C-terminal domain NLG07_01075 PF12241 Trans-2-enoyl-CoA reductase catalytic region NLG07_01075 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NLG07_01075 PF07055 Enoyl reductase FAD binding domain NLG07_01080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NLG07_01080 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NLG07_01085 PF00311 Phosphoenolpyruvate carboxylase NLG07_01090 PF00056 lactate/malate dehydrogenase, NAD binding domain NLG07_01090 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NLG07_01095 PF02863 Arginine repressor, C-terminal domain NLG07_01095 PF01316 Arginine repressor, DNA binding domain NLG07_01105 PF02798 Glutathione S-transferase, N-terminal domain NLG07_01115 PF00485 Phosphoribulokinase / Uridine kinase family NLG07_01120 PF07670 Nucleoside recognition NLG07_01120 PF07662 Na+ dependent nucleoside transporter C-terminus NLG07_01120 PF01773 Na+ dependent nucleoside transporter N-terminus NLG07_01135 PF02028 BCCT, betaine/carnitine/choline family transporter NLG07_01140 PF07715 TonB-dependent Receptor Plug Domain NLG07_01140 PF00593 TonB dependent receptor NLG07_01145 PF13181 Tetratricopeptide repeat NLG07_01165 PF00072 Response regulator receiver domain NLG07_01165 PF00196 Bacterial regulatory proteins, luxR family NLG07_01170 PF00501 AMP-binding enzyme NLG07_01170 PF16177 Acetyl-coenzyme A synthetase N-terminus NLG07_01170 PF13193 AMP-binding enzyme C-terminal domain NLG07_01175 PF00248 Aldo/keto reductase family NLG07_01180 PF00850 Histone deacetylase domain NLG07_01185 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NLG07_01185 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NLG07_01190 PF00005 ABC transporter NLG07_01190 PF00664 ABC transporter transmembrane region NLG07_01200 PF03143 Elongation factor Tu C-terminal domain NLG07_01200 PF03144 Elongation factor Tu domain 2 NLG07_01200 PF00009 Elongation factor Tu GTP binding domain NLG07_01225 PF03309 Type III pantothenate kinase NLG07_01230 PF08279 HTH domain NLG07_01230 PF03099 Biotin/lipoate A/B protein ligase family NLG07_01230 PF02237 Biotin protein ligase C terminal domain NLG07_01235 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NLG07_01235 PF01565 FAD binding domain NLG07_01245 PF01196 Ribosomal protein L17 NLG07_01250 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NLG07_01250 PF01000 RNA polymerase Rpb3/RpoA insert domain NLG07_01250 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NLG07_01255 PF01479 S4 domain NLG07_01255 PF00163 Ribosomal protein S4/S9 N-terminal domain NLG07_01260 PF00411 Ribosomal protein S11 NLG07_01265 PF00416 Ribosomal protein S13/S18 NLG07_01270 PF00444 Ribosomal protein L36 NLG07_01275 PF00344 SecY translocase NLG07_01280 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NLG07_01285 PF00327 Ribosomal protein L30p/L7e NLG07_01290 PF00333 Ribosomal protein S5, N-terminal domain NLG07_01290 PF03719 Ribosomal protein S5, C-terminal domain NLG07_01295 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NLG07_01300 PF00347 Ribosomal protein L6 NLG07_01305 PF00410 Ribosomal protein S8 NLG07_01310 PF00253 Ribosomal protein S14p/S29e NLG07_01315 PF00281 Ribosomal protein L5 NLG07_01315 PF00673 ribosomal L5P family C-terminus NLG07_01320 PF00467 KOW motif NLG07_01320 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NLG07_01325 PF00238 Ribosomal protein L14p/L23e NLG07_01340 PF08032 RNA 2'-O ribose methyltransferase substrate binding NLG07_01340 PF00588 SpoU rRNA Methylase family NLG07_01345 PF00575 S1 RNA binding domain NLG07_01345 PF00773 RNB domain NLG07_01345 PF08206 Ribonuclease B OB domain NLG07_01345 PF08461 Ribonuclease R winged-helix domain NLG07_01345 PF17876 Cold shock domain NLG07_01350 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NLG07_01355 PF00175 Oxidoreductase NAD-binding domain NLG07_01360 PF00313 'Cold-shock' DNA-binding domain NLG07_01365 PF10369 Small subunit of acetolactate synthase NLG07_01370 PF00205 Thiamine pyrophosphate enzyme, central domain NLG07_01370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NLG07_01370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NLG07_01380 PF13181 Tetratricopeptide repeat NLG07_01385 PF00593 TonB dependent receptor NLG07_01385 PF07715 TonB-dependent Receptor Plug Domain NLG07_01390 PF00929 Exonuclease NLG07_01395 PF03193 RsgA GTPase NLG07_01400 PF02666 Phosphatidylserine decarboxylase NLG07_01420 PF01551 Peptidase family M23 NLG07_01425 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NLG07_01425 PF01676 Metalloenzyme superfamily NLG07_01430 PF00581 Rhodanese-like domain NLG07_01435 PF00462 Glutaredoxin NLG07_01440 PF02556 Preprotein translocase subunit SecB NLG07_01445 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NLG07_01445 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NLG07_01450 PF00588 SpoU rRNA Methylase family NLG07_01455 PF12146 Serine aminopeptidase, S33 NLG07_01460 PF01118 Semialdehyde dehydrogenase, NAD binding domain NLG07_01460 PF02774 Semialdehyde dehydrogenase, dimerisation domain NLG07_01465 PF00696 Amino acid kinase family NLG07_01470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NLG07_01470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NLG07_01475 PF00764 Arginosuccinate synthase NLG07_01480 PF14698 Argininosuccinate lyase C-terminal NLG07_01480 PF00206 Lyase NLG07_01485 PF00583 Acetyltransferase (GNAT) family NLG07_01485 PF00696 Amino acid kinase family NLG07_01490 PF00390 Malic enzyme, N-terminal domain NLG07_01490 PF03949 Malic enzyme, NAD binding domain NLG07_01495 PF17092 Penicillin-binding protein OB-like domain NLG07_01495 PF00905 Penicillin binding protein transpeptidase domain NLG07_01495 PF00912 Transglycosylase NLG07_01505 PF11104 Type IV pilus assembly protein PilM; NLG07_01510 PF05137 Fimbrial assembly protein (PilN) NLG07_01525 PF11741 AMIN domain NLG07_01525 PF03958 Bacterial type II/III secretion system short domain NLG07_01525 PF07660 Secretin and TonB N terminus short domain NLG07_01525 PF00263 Bacterial type II and III secretion system protein NLG07_01530 PF01202 Shikimate kinase NLG07_01535 PF01761 3-dehydroquinate synthase NLG07_01545 PF02086 D12 class N6 adenine-specific DNA methyltransferase NLG07_01565 PF00834 Ribulose-phosphate 3 epimerase family NLG07_01570 PF00579 tRNA synthetases class I (W and Y) NLG07_01575 PF00117 Glutamine amidotransferase class-I NLG07_01580 PF00202 Aminotransferase class-III NLG07_01585 PF04958 Arginine N-succinyltransferase beta subunit NLG07_01590 PF00171 Aldehyde dehydrogenase family NLG07_01605 PF03989 DNA gyrase C-terminal domain, beta-propeller NLG07_01605 PF00521 DNA gyrase/topoisomerase IV, subunit A NLG07_01610 PF00072 Response regulator receiver domain NLG07_01610 PF01627 Hpt domain NLG07_01610 PF00672 HAMP domain NLG07_01610 PF00512 His Kinase A (phospho-acceptor) domain NLG07_01610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_01610 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NLG07_01620 PF00873 AcrB/AcrD/AcrF family NLG07_01625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NLG07_01630 PF00440 Bacterial regulatory proteins, tetR family NLG07_01635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NLG07_01635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NLG07_01640 PF00202 Aminotransferase class-III NLG07_01645 PF04261 Dyp-type peroxidase family NLG07_01655 PF00326 Prolyl oligopeptidase family NLG07_01655 PF07676 WD40-like Beta Propeller Repeat NLG07_01660 PF00196 Bacterial regulatory proteins, luxR family NLG07_01660 PF00072 Response regulator receiver domain NLG07_01665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_01665 PF07730 Histidine kinase NLG07_01665 PF05231 MASE1 NLG07_01670 PF00909 Ammonium Transporter Family NLG07_01675 PF00543 Nitrogen regulatory protein P-II NLG07_01685 PF00905 Penicillin binding protein transpeptidase domain NLG07_01685 PF00912 Transglycosylase NLG07_01685 PF14814 Bifunctional transglycosylase second domain NLG07_01690 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NLG07_01690 PF00561 alpha/beta hydrolase fold NLG07_01695 PF05233 PHB accumulation regulatory domain NLG07_01695 PF07879 PHB/PHA accumulation regulator DNA-binding domain NLG07_01715 PF13406 Transglycosylase SLT domain NLG07_01730 PF01842 ACT domain NLG07_01730 PF00551 Formyl transferase NLG07_01735 PF01432 Peptidase family M3 NLG07_01740 PF00106 short chain dehydrogenase NLG07_01745 PF00534 Glycosyl transferases group 1 NLG07_01745 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NLG07_01760 PF00266 Aminotransferase class-V NLG07_01775 PF00884 Sulfatase NLG07_01780 PF01219 Prokaryotic diacylglycerol kinase NLG07_01785 PF08019 Phosphoethanolamine transferase EptA/EptB NLG07_01785 PF00884 Sulfatase NLG07_01795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NLG07_01800 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NLG07_01805 PF03480 Bacterial extracellular solute-binding protein, family 7 NLG07_01810 PF07730 Histidine kinase NLG07_01810 PF17200 Single Cache domain 2 NLG07_01815 PF00196 Bacterial regulatory proteins, luxR family NLG07_01815 PF00072 Response regulator receiver domain NLG07_01820 PF13193 AMP-binding enzyme C-terminal domain NLG07_01820 PF00501 AMP-binding enzyme NLG07_01825 PF00366 Ribosomal protein S17 NLG07_01830 PF00831 Ribosomal L29 protein NLG07_01835 PF00252 Ribosomal protein L16p/L10e NLG07_01840 PF00189 Ribosomal protein S3, C-terminal domain NLG07_01840 PF07650 KH domain NLG07_01845 PF00237 Ribosomal protein L22p/L17e NLG07_01850 PF00203 Ribosomal protein S19 NLG07_01855 PF00181 Ribosomal Proteins L2, RNA binding domain NLG07_01855 PF03947 Ribosomal Proteins L2, C-terminal domain NLG07_01860 PF00276 Ribosomal protein L23 NLG07_01865 PF00573 Ribosomal protein L4/L1 family NLG07_01870 PF00297 Ribosomal protein L3 NLG07_01875 PF00338 Ribosomal protein S10p/S20e NLG07_01880 PF00437 Type II/IV secretion system protein NLG07_01890 PF13438 Domain of unknown function (DUF4113) NLG07_01890 PF00817 impB/mucB/samB family NLG07_01890 PF11798 IMS family HHH motif NLG07_01890 PF11799 impB/mucB/samB family C-terminal domain NLG07_01895 PF00717 Peptidase S24-like NLG07_01915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NLG07_01920 PF04073 Aminoacyl-tRNA editing domain NLG07_01930 PF00005 ABC transporter NLG07_01945 PF00043 Glutathione S-transferase, C-terminal domain NLG07_01945 PF13417 Glutathione S-transferase, N-terminal domain NLG07_01950 PF00593 TonB dependent receptor NLG07_01950 PF07715 TonB-dependent Receptor Plug Domain NLG07_01955 PF14602 Hexapeptide repeat of succinyl-transferase NLG07_01955 PF12464 Maltose acetyltransferase NLG07_01970 PF00474 Sodium:solute symporter family NLG07_01980 PF00356 Bacterial regulatory proteins, lacI family NLG07_01985 PF00232 Glycosyl hydrolase family 1 NLG07_01990 PF07690 Major Facilitator Superfamily NLG07_01995 PF14310 Fibronectin type III-like domain NLG07_01995 PF00933 Glycosyl hydrolase family 3 N terminal domain NLG07_01995 PF01915 Glycosyl hydrolase family 3 C-terminal domain NLG07_02005 PF00722 Glycosyl hydrolases family 16 NLG07_02010 PF09905 DNA-binding protein VF530 NLG07_02015 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NLG07_02015 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NLG07_02020 PF00294 pfkB family carbohydrate kinase NLG07_02025 PF08713 DNA alkylation repair enzyme NLG07_02035 PF16657 Maltogenic Amylase, C-terminal domain NLG07_02035 PF00128 Alpha amylase, catalytic domain NLG07_02040 PF02142 MGS-like domain NLG07_02045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NLG07_02045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NLG07_02050 PF00455 DeoR C terminal sensor domain NLG07_02050 PF08220 DeoR-like helix-turn-helix domain NLG07_02055 PF01266 FAD dependent oxidoreductase NLG07_02055 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NLG07_02070 PF03705 CheR methyltransferase, all-alpha domain NLG07_02070 PF01739 CheR methyltransferase, SAM binding domain NLG07_02070 PF08448 PAS fold NLG07_02070 PF01339 CheB methylesterase NLG07_02075 PF00072 Response regulator receiver domain NLG07_02075 PF00486 Transcriptional regulatory protein, C terminal NLG07_02080 PF08497 Radical SAM N-terminal NLG07_02080 PF04055 Radical SAM superfamily NLG07_02080 PF11842 Domain of unknown function (DUF3362) NLG07_02090 PF00072 Response regulator receiver domain NLG07_02090 PF00989 PAS fold NLG07_02090 PF01627 Hpt domain NLG07_02090 PF18415 Histidine kinase receptor ArcB trans-membrane domain NLG07_02090 PF00512 His Kinase A (phospho-acceptor) domain NLG07_02090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_02100 PF15978 Tn7-like transposition protein D NLG07_02100 PF06527 TniQ NLG07_02105 PF13401 AAA domain NLG07_02105 PF11426 Tn7 transposition regulator TnsC NLG07_02110 PF00665 Integrase core domain NLG07_02115 PF08721 TnsA endonuclease C terminal NLG07_02115 PF08722 TnsA endonuclease N terminal NLG07_02120 PF01380 SIS domain NLG07_02125 PF00455 DeoR C terminal sensor domain NLG07_02125 PF08220 DeoR-like helix-turn-helix domain NLG07_02130 PF13847 Methyltransferase domain NLG07_02135 PF00132 Bacterial transferase hexapeptide (six repeats) NLG07_02135 PF12804 MobA-like NTP transferase domain NLG07_02135 PF14602 Hexapeptide repeat of succinyl-transferase NLG07_02145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NLG07_02145 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NLG07_02150 PF17810 Arginine decarboxylase helical bundle domain NLG07_02150 PF17944 Arginine decarboxylase C-terminal helical extension NLG07_02150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NLG07_02155 PF00118 TCP-1/cpn60 chaperonin family NLG07_02160 PF00166 Chaperonin 10 Kd subunit NLG07_02165 PF01979 Amidohydrolase family NLG07_02165 PF13382 Adenine deaminase C-terminal domain NLG07_02170 PF04186 FxsA cytoplasmic membrane protein NLG07_02175 PF11412 Disulphide bond corrector protein DsbC NLG07_02175 PF02683 Cytochrome C biogenesis protein transmembrane region NLG07_02185 PF01220 Dehydroquinase class II NLG07_02190 PF00364 Biotin-requiring enzyme NLG07_02195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NLG07_02195 PF02785 Biotin carboxylase C-terminal domain NLG07_02195 PF00289 Biotin carboxylase, N-terminal domain NLG07_02205 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NLG07_02205 PF12833 Helix-turn-helix domain NLG07_02225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NLG07_02225 PF03466 LysR substrate binding domain NLG07_02240 PF00593 TonB dependent receptor NLG07_02240 PF07715 TonB-dependent Receptor Plug Domain NLG07_02255 PF11490 DNA polymerase III polC-type N-terminus II NLG07_02255 PF07733 Bacterial DNA polymerase III alpha NTPase domain NLG07_02255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NLG07_02255 PF14579 Helix-hairpin-helix motif NLG07_02255 PF01336 OB-fold nucleic acid binding domain NLG07_02255 PF02811 PHP domain NLG07_02255 PF00929 Exonuclease NLG07_02295 PF01207 Dihydrouridine synthase (Dus) NLG07_02300 PF02954 Bacterial regulatory protein, Fis family NLG07_02305 PF02142 MGS-like domain NLG07_02305 PF01808 AICARFT/IMPCHase bienzyme NLG07_02310 PF02844 Phosphoribosylglycinamide synthetase, N domain NLG07_02310 PF02843 Phosphoribosylglycinamide synthetase, C domain NLG07_02310 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NLG07_02315 PF00485 Phosphoribulokinase / Uridine kinase family NLG07_02320 PF00486 Transcriptional regulatory protein, C terminal NLG07_02320 PF00072 Response regulator receiver domain NLG07_02325 PF00512 His Kinase A (phospho-acceptor) domain NLG07_02325 PF00672 HAMP domain NLG07_02325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_02330 PF01430 Hsp33 protein NLG07_02335 PF01479 S4 domain NLG07_02340 PF11356 Type II secretion system protein C NLG07_02345 PF00263 Bacterial type II and III secretion system protein NLG07_02345 PF03958 Bacterial type II/III secretion system short domain NLG07_02350 PF00437 Type II/IV secretion system protein NLG07_02355 PF00482 Type II secretion system (T2SS), protein F NLG07_02360 PF07963 Prokaryotic N-terminal methylation motif NLG07_02360 PF08334 Type II secretion system (T2SS), protein G NLG07_02365 PF12019 Type II transport protein GspH NLG07_02365 PF07963 Prokaryotic N-terminal methylation motif NLG07_02370 PF07963 Prokaryotic N-terminal methylation motif NLG07_02370 PF02501 Type II secretion system (T2SS), protein I NLG07_02375 PF07963 Prokaryotic N-terminal methylation motif NLG07_02375 PF11612 Type II secretion system (T2SS), protein J NLG07_02380 PF03934 Type II secretion system (T2SS), protein K NLG07_02385 PF05134 Type II secretion system (T2SS), protein L NLG07_02385 PF12693 GspL periplasmic domain NLG07_02390 PF04612 Type II secretion system (T2SS), protein M NLG07_02400 PF00360 Phytochrome region NLG07_02400 PF00990 Diguanylate cyclase, GGDEF domain NLG07_02400 PF01590 GAF domain NLG07_02400 PF00563 EAL domain NLG07_02405 PF13419 Haloacid dehalogenase-like hydrolase NLG07_02410 PF00293 NUDIX domain NLG07_02415 PF00459 Inositol monophosphatase family NLG07_02420 PF06794 Uncharacterised protein family (UPF0270) NLG07_02425 PF00561 alpha/beta hydrolase fold NLG07_02435 PF00005 ABC transporter NLG07_02435 PF12848 ABC transporter NLG07_02440 PF09526 Probable metal-binding protein (DUF2387) NLG07_02445 PF04102 SlyX NLG07_02455 PF01541 GIY-YIG catalytic domain NLG07_02460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NLG07_02460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NLG07_02465 PF00672 HAMP domain NLG07_02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_02465 PF00512 His Kinase A (phospho-acceptor) domain NLG07_02465 PF01627 Hpt domain NLG07_02465 PF00072 Response regulator receiver domain NLG07_02465 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NLG07_02475 PF01272 Transcription elongation factor, GreA/GreB, C-term NLG07_02475 PF03449 Transcription elongation factor, N-terminal NLG07_02485 PF17674 HHH domain NLG07_02485 PF00575 S1 RNA binding domain NLG07_02485 PF16921 Tex protein YqgF-like domain NLG07_02485 PF09371 Tex-like protein N-terminal domain NLG07_02490 PF00561 alpha/beta hydrolase fold NLG07_02495 PF00156 Phosphoribosyl transferase domain NLG07_02505 PF01521 Iron-sulphur cluster biosynthesis NLG07_02505 PF01106 NifU-like domain NLG07_02510 PF01554 MatE NLG07_02515 PF01758 Sodium Bile acid symporter family NLG07_02525 PF02630 SCO1/SenC NLG07_02530 PF01040 UbiA prenyltransferase family NLG07_02535 PF02628 Cytochrome oxidase assembly protein NLG07_02555 PF00510 Cytochrome c oxidase subunit III NLG07_02560 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NLG07_02565 PF00115 Cytochrome C and Quinol oxidase polypeptide I NLG07_02570 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NLG07_02570 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NLG07_02575 PF01726 LexA DNA binding domain NLG07_02575 PF00717 Peptidase S24-like NLG07_02580 PF01553 Acyltransferase NLG07_02590 PF00291 Pyridoxal-phosphate dependent enzyme NLG07_02590 PF00585 C-terminal regulatory domain of Threonine dehydratase NLG07_02595 PF00920 Dehydratase family NLG07_02600 PF01063 Amino-transferase class IV NLG07_02605 PF13335 Magnesium chelatase, subunit ChlI C-terminal NLG07_02605 PF01078 Magnesium chelatase, subunit ChlI NLG07_02610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NLG07_02610 PF03466 LysR substrate binding domain NLG07_02615 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NLG07_02615 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NLG07_02620 PF07690 Major Facilitator Superfamily NLG07_02630 PF00171 Aldehyde dehydrogenase family NLG07_02635 PF00696 Amino acid kinase family NLG07_02635 PF01472 PUA domain NLG07_02650 PF00171 Aldehyde dehydrogenase family NLG07_02670 PF01979 Amidohydrolase family NLG07_02685 PF01206 Sulfurtransferase TusA NLG07_02690 PF00156 Phosphoribosyl transferase domain NLG07_02695 PF01138 3' exoribonuclease family, domain 1 NLG07_02695 PF03725 3' exoribonuclease family, domain 2 NLG07_02700 PF08340 Domain of unknown function (DUF1732) NLG07_02700 PF03755 YicC-like family, N-terminal region NLG07_02715 PF00873 AcrB/AcrD/AcrF family NLG07_02735 PF01545 Cation efflux family NLG07_02735 PF16916 Dimerisation domain of Zinc Transporter NLG07_02760 PF13411 MerR HTH family regulatory protein NLG07_02780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NLG07_02785 PF00873 AcrB/AcrD/AcrF family NLG07_02795 PF00970 Oxidoreductase FAD-binding domain NLG07_02795 PF00111 2Fe-2S iron-sulfur cluster binding domain NLG07_02795 PF00175 Oxidoreductase NAD-binding domain NLG07_02830 PF02911 Formyl transferase, C-terminal domain NLG07_02830 PF00551 Formyl transferase NLG07_02845 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NLG07_02845 PF00034 Cytochrome c NLG07_02845 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NLG07_02850 PF13411 MerR HTH family regulatory protein NLG07_02855 PF00403 Heavy-metal-associated domain NLG07_02890 PF13188 PAS domain NLG07_02890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_02890 PF00512 His Kinase A (phospho-acceptor) domain NLG07_02890 PF00989 PAS fold NLG07_02890 PF13426 PAS domain NLG07_02905 PF00694 Aconitase C-terminal domain NLG07_02905 PF00330 Aconitase family (aconitate hydratase) NLG07_02910 PF01177 Asp/Glu/Hydantoin racemase NLG07_02915 PF07687 Peptidase dimerisation domain NLG07_02915 PF01546 Peptidase family M20/M25/M40 NLG07_02930 PF13350 Tyrosine phosphatase family NLG07_02935 PF04324 BFD-like [2Fe-2S] binding domain NLG07_02935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NLG07_02935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NLG07_02935 PF07992 Pyridine nucleotide-disulphide oxidoreductase NLG07_02935 PF18267 Rubredoxin NAD+ reductase C-terminal domain NLG07_02940 PF13806 Rieske-like [2Fe-2S] domain NLG07_02955 PF00005 ABC transporter NLG07_02960 PF00528 Binding-protein-dependent transport system inner membrane component NLG07_02965 PF00005 ABC transporter NLG07_02975 PF00528 Binding-protein-dependent transport system inner membrane component NLG07_02980 PF00005 ABC transporter NLG07_02985 PF00994 Probable molybdopterin binding domain NLG07_02990 PF01967 MoaC family NLG07_02995 PF02597 ThiS family NLG07_03000 PF02391 MoaE protein NLG07_03005 PF02885 Glycosyl transferase family, helical bundle domain NLG07_03005 PF00591 Glycosyl transferase family, a/b domain NLG07_03010 PF04324 BFD-like [2Fe-2S] binding domain NLG07_03010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NLG07_03010 PF00384 Molybdopterin oxidoreductase NLG07_03010 PF01568 Molydopterin dinucleotide binding domain NLG07_03015 PF03861 ANTAR domain NLG07_03015 PF08376 Nitrate and nitrite sensing NLG07_03020 PF04055 Radical SAM superfamily NLG07_03020 PF06463 Molybdenum Cofactor Synthesis C NLG07_03025 PF12804 MobA-like NTP transferase domain NLG07_03030 PF00899 ThiF family NLG07_03035 PF00994 Probable molybdopterin binding domain NLG07_03035 PF03454 MoeA C-terminal region (domain IV) NLG07_03035 PF03453 MoeA N-terminal region (domain I and II) NLG07_03040 PF03806 AbgT putative transporter family NLG07_03045 PF11490 DNA polymerase III polC-type N-terminus II NLG07_03045 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NLG07_03045 PF14579 Helix-hairpin-helix motif NLG07_03045 PF02811 PHP domain NLG07_03045 PF00929 Exonuclease NLG07_03045 PF07733 Bacterial DNA polymerase III alpha NTPase domain NLG07_03050 PF00582 Universal stress protein family NLG07_03065 PF03009 Glycerophosphoryl diester phosphodiesterase family NLG07_03075 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) NLG07_03080 PF00881 Nitroreductase family NLG07_03110 PF12320 Type 5 capsule protein repressor C-terminal domain NLG07_03110 PF00149 Calcineurin-like phosphoesterase NLG07_03115 PF13476 AAA domain NLG07_03160 PF08482 ATP-dependent helicase C-terminal NLG07_03160 PF00271 Helicase conserved C-terminal domain NLG07_03160 PF04408 Helicase associated domain (HA2) NLG07_03160 PF00270 DEAD/DEAH box helicase NLG07_03165 PF07730 Histidine kinase NLG07_03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_03170 PF00072 Response regulator receiver domain NLG07_03170 PF00196 Bacterial regulatory proteins, luxR family NLG07_03180 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NLG07_03180 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NLG07_03185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NLG07_03185 PF02874 ATP synthase alpha/beta family, beta-barrel domain NLG07_03190 PF00231 ATP synthase NLG07_03195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NLG07_03195 PF00306 ATP synthase alpha/beta chain, C terminal domain NLG07_03195 PF02874 ATP synthase alpha/beta family, beta-barrel domain NLG07_03200 PF00213 ATP synthase delta (OSCP) subunit NLG07_03205 PF00430 ATP synthase B/B' CF(0) NLG07_03210 PF00137 ATP synthase subunit C NLG07_03215 PF00119 ATP synthase A chain NLG07_03225 PF17762 HTH domain found in ParB protein NLG07_03225 PF02195 ParB-like nuclease domain NLG07_03230 PF13614 AAA domain NLG07_03235 PF02527 rRNA small subunit methyltransferase G NLG07_03240 PF13932 GidA associated domain NLG07_03240 PF01134 Glucose inhibited division protein A NLG07_03255 PF00258 Flavodoxin NLG07_03260 PF10396 GTP-binding protein TrmE N-terminus NLG07_03260 PF12631 MnmE helical domain NLG07_03260 PF01926 50S ribosome-binding GTPase NLG07_03265 PF04461 Protein of unknown function (DUF520) NLG07_03270 PF02096 60Kd inner membrane protein NLG07_03270 PF14849 YidC periplasmic domain NLG07_03275 PF01809 Putative membrane protein insertion efficiency factor NLG07_03280 PF00825 Ribonuclease P NLG07_03285 PF00468 Ribosomal protein L34 NLG07_03290 PF00308 Bacterial dnaA protein NLG07_03290 PF08299 Bacterial dnaA protein helix-turn-helix NLG07_03290 PF11638 DnaA N-terminal domain NLG07_03295 PF00712 DNA polymerase III beta subunit, N-terminal domain NLG07_03295 PF02767 DNA polymerase III beta subunit, central domain NLG07_03295 PF02768 DNA polymerase III beta subunit, C-terminal domain NLG07_03300 PF02463 RecF/RecN/SMC N terminal domain NLG07_03305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_03305 PF01751 Toprim domain NLG07_03305 PF00204 DNA gyrase B NLG07_03305 PF00986 DNA gyrase B subunit, carboxyl terminus NLG07_03305 PF18053 DNA gyrase B subunit insert domain NLG07_03310 PF00472 RF-1 domain NLG07_03320 PF02092 Glycyl-tRNA synthetase beta subunit NLG07_03320 PF05746 DALR anticodon binding domain NLG07_03325 PF02091 Glycyl-tRNA synthetase alpha subunit NLG07_03330 PF10675 Protein of unknown function (DUF2489) NLG07_03335 PF04220 Der GTPase activator (YihI) NLG07_03345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NLG07_03350 PF01926 50S ribosome-binding GTPase NLG07_03355 PF01810 LysE type translocator NLG07_03360 PF01367 5'-3' exonuclease, C-terminal SAM fold NLG07_03360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NLG07_03360 PF00476 DNA polymerase family A NLG07_03360 PF01612 3'-5' exonuclease NLG07_03365 PF02386 Cation transport protein NLG07_03370 PF02080 TrkA-C domain NLG07_03370 PF02254 TrkA-N domain NLG07_03375 PF01029 NusB family NLG07_03375 PF01189 16S rRNA methyltransferase RsmB/F NLG07_03380 PF02911 Formyl transferase, C-terminal domain NLG07_03380 PF00551 Formyl transferase NLG07_03385 PF01327 Polypeptide deformylase NLG07_03395 PF02481 DNA recombination-mediator protein A NLG07_03395 PF17782 DprA winged helix domain NLG07_03400 PF04361 Protein of unknown function (DUF494) NLG07_03405 PF01396 Topoisomerase DNA binding C4 zinc finger NLG07_03410 PF01300 Telomere recombination NLG07_03415 PF01218 Coproporphyrinogen III oxidase NLG07_03420 PF03922 OmpW family NLG07_03425 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NLG07_03425 PF01488 Shikimate / quinate 5-dehydrogenase NLG07_03425 PF08501 Shikimate dehydrogenase substrate binding domain NLG07_03430 PF00132 Bacterial transferase hexapeptide (six repeats) NLG07_03450 PF03466 LysR substrate binding domain NLG07_03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NLG07_03475 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation NLG07_03475 PF14508 Glycosyl-hydrolase 97 N-terminal NLG07_03475 PF10566 Glycoside hydrolase 97 NLG07_03480 PF04820 Tryptophan halogenase NLG07_03485 PF04820 Tryptophan halogenase NLG07_03495 PF00756 Putative esterase NLG07_03515 PF00440 Bacterial regulatory proteins, tetR family NLG07_03520 PF04127 DNA / pantothenate metabolism flavoprotein NLG07_03520 PF02441 Flavoprotein NLG07_03525 PF04002 RadC-like JAB domain NLG07_03530 PF00830 Ribosomal L28 family NLG07_03535 PF00471 Ribosomal protein L33 NLG07_03540 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NLG07_03540 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NLG07_03540 PF06827 Zinc finger found in FPG and IleRS NLG07_03545 PF01467 Cytidylyltransferase-like NLG07_03555 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NLG07_03560 PF00563 EAL domain NLG07_03560 PF00990 Diguanylate cyclase, GGDEF domain NLG07_03560 PF03707 Bacterial signalling protein N terminal repeat NLG07_03565 PF00155 Aminotransferase class I and II NLG07_03570 PF08240 Alcohol dehydrogenase GroES-like domain NLG07_03570 PF00107 Zinc-binding dehydrogenase NLG07_03575 PF00581 Rhodanese-like domain NLG07_03580 PF01694 Rhomboid family NLG07_03580 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NLG07_03585 PF04345 Chorismate lyase NLG07_03590 PF01040 UbiA prenyltransferase family NLG07_03595 PF04380 Membrane fusogenic activity NLG07_03600 PF00580 UvrD/REP helicase N-terminal domain NLG07_03600 PF13361 UvrD-like helicase C-terminal domain NLG07_03605 PF00881 Nitroreductase family NLG07_03610 PF07219 HemY protein N-terminus NLG07_03610 PF07719 Tetratricopeptide repeat NLG07_03615 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NLG07_03625 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NLG07_03625 PF03900 Porphobilinogen deaminase, C-terminal domain NLG07_03630 PF02230 Phospholipase/Carboxylesterase NLG07_03635 PF01491 Frataxin-like domain NLG07_03640 PF00625 Guanylate kinase NLG07_03645 PF01192 RNA polymerase Rpb6 NLG07_03650 PF13291 ACT domain NLG07_03650 PF04607 Region found in RelA / SpoT proteins NLG07_03650 PF02824 TGS domain NLG07_03655 PF01042 Endoribonuclease L-PSP NLG07_03660 PF12105 SpoU, rRNA methylase, C-terminal NLG07_03660 PF00588 SpoU rRNA Methylase family NLG07_03665 PF00270 DEAD/DEAH box helicase NLG07_03665 PF00271 Helicase conserved C-terminal domain NLG07_03665 PF17191 RecG wedge domain NLG07_03670 PF04445 Putative SAM-dependent methyltransferase NLG07_03675 PF01523 Putative modulator of DNA gyrase NLG07_03680 PF04751 Protein of unknown function (DUF615) NLG07_03685 PF01523 Putative modulator of DNA gyrase NLG07_03690 PF00795 Carbon-nitrogen hydrolase NLG07_03695 PF13116 Protein of unknown function NLG07_03695 PF13502 AsmA-like C-terminal region NLG07_03700 PF10150 Ribonuclease E/G family NLG07_03700 PF00575 S1 RNA binding domain NLG07_03705 PF02545 Maf-like protein NLG07_03710 PF04093 rod shape-determining protein MreD NLG07_03715 PF04085 rod shape-determining protein MreC NLG07_03725 PF00436 Single-strand binding protein family NLG07_03730 PF07690 Major Facilitator Superfamily NLG07_03735 PF00005 ABC transporter NLG07_03735 PF17755 UvrA DNA-binding domain NLG07_03735 PF17760 UvrA interaction domain NLG07_03745 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NLG07_03750 PF01225 Mur ligase family, catalytic domain NLG07_03750 PF02875 Mur ligase family, glutamate ligase domain NLG07_03750 PF08245 Mur ligase middle domain NLG07_03755 PF02441 Flavoprotein NLG07_03765 PF01569 PAP2 superfamily NLG07_03780 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NLG07_03780 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NLG07_03785 PF01678 Diaminopimelate epimerase NLG07_03795 PF13419 Haloacid dehalogenase-like hydrolase NLG07_03800 PF13361 UvrD-like helicase C-terminal domain NLG07_03800 PF00580 UvrD/REP helicase N-terminal domain NLG07_03815 PF00892 EamA-like transporter family NLG07_03820 PF09382 RQC domain NLG07_03820 PF00270 DEAD/DEAH box helicase NLG07_03820 PF00271 Helicase conserved C-terminal domain NLG07_03820 PF00570 HRDC domain NLG07_03820 PF16124 RecQ zinc-binding NLG07_03830 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NLG07_03835 PF00925 GTP cyclohydrolase II NLG07_03845 PF00909 Ammonium Transporter Family NLG07_03855 PF00072 Response regulator receiver domain NLG07_03855 PF00486 Transcriptional regulatory protein, C terminal NLG07_03860 PF08323 Starch synthase catalytic domain NLG07_03860 PF00534 Glycosyl transferases group 1 NLG07_03865 PF08468 Methyltransferase small domain N-terminal NLG07_03865 PF05175 Methyltransferase small domain NLG07_03870 PF02390 Putative methyltransferase NLG07_03875 PF00633 Helix-hairpin-helix motif NLG07_03875 PF00730 HhH-GPD superfamily base excision DNA repair protein NLG07_03875 PF14815 NUDIX domain NLG07_03880 PF04362 Bacterial Fe(2+) trafficking NLG07_03900 PF02868 Thermolysin metallopeptidase, alpha-helical domain NLG07_03900 PF07504 Fungalysin/Thermolysin Propeptide Motif NLG07_03900 PF03413 Peptidase propeptide and YPEB domain NLG07_03900 PF01447 Thermolysin metallopeptidase, catalytic domain NLG07_03915 PF00440 Bacterial regulatory proteins, tetR family NLG07_03915 PF08361 MAATS-type transcriptional repressor, C-terminal region NLG07_03925 PF00873 AcrB/AcrD/AcrF family NLG07_03970 PF00884 Sulfatase NLG07_03980 PF01219 Prokaryotic diacylglycerol kinase NLG07_03985 PF08019 Phosphoethanolamine transferase EptA/EptB NLG07_03985 PF00884 Sulfatase NLG07_04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_04015 PF12833 Helix-turn-helix domain NLG07_04015 PF00512 His Kinase A (phospho-acceptor) domain NLG07_04015 PF07494 Two component regulator propeller NLG07_04015 PF00072 Response regulator receiver domain NLG07_04015 PF07495 Y_Y_Y domain NLG07_04015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_04015 PF00512 His Kinase A (phospho-acceptor) domain NLG07_04015 PF12833 Helix-turn-helix domain NLG07_04015 PF07494 Two component regulator propeller NLG07_04015 PF00072 Response regulator receiver domain NLG07_04015 PF07495 Y_Y_Y domain NLG07_04025 PF01250 Ribosomal protein S6 NLG07_04030 PF01084 Ribosomal protein S18 NLG07_04035 PF01281 Ribosomal protein L9, N-terminal domain NLG07_04035 PF03948 Ribosomal protein L9, C-terminal domain NLG07_04050 PF00772 DnaB-like helicase N terminal domain NLG07_04050 PF03796 DnaB-like helicase C terminal domain NLG07_04055 PF00691 OmpA family NLG07_04055 PF05736 OprF membrane domain NLG07_04060 PF01475 Ferric uptake regulator family NLG07_04065 PF00293 NUDIX domain NLG07_04065 PF09297 NADH pyrophosphatase zinc ribbon domain NLG07_04070 PF01208 Uroporphyrinogen decarboxylase (URO-D) NLG07_04075 PF08331 Domain of unknown function (DUF1730) NLG07_04080 PF01256 Carbohydrate kinase NLG07_04080 PF03853 YjeF-related protein N-terminus NLG07_04085 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NLG07_04090 PF01520 N-acetylmuramoyl-L-alanine amidase NLG07_04095 PF01119 DNA mismatch repair protein, C-terminal domain NLG07_04095 PF08676 MutL C terminal dimerisation domain NLG07_04105 PF17209 Hfq protein NLG07_04110 PF16360 GTP-binding GTPase Middle Region NLG07_04110 PF01926 50S ribosome-binding GTPase NLG07_04110 PF13167 GTP-binding GTPase N-terminal NLG07_04115 PF01145 SPFH domain / Band 7 family NLG07_04115 PF12221 Bacterial membrane protein N terminal NLG07_04120 PF01145 SPFH domain / Band 7 family NLG07_04125 PF03806 AbgT putative transporter family NLG07_04130 PF00762 Ferrochelatase NLG07_04165 PF04679 ATP dependent DNA ligase C terminal region NLG07_04165 PF01068 ATP dependent DNA ligase domain NLG07_04165 PF04675 DNA ligase N terminus NLG07_04180 PF00128 Alpha amylase, catalytic domain NLG07_04180 PF16657 Maltogenic Amylase, C-terminal domain NLG07_04195 PF00270 DEAD/DEAH box helicase NLG07_04195 PF08494 DEAD/H associated NLG07_04195 PF00271 Helicase conserved C-terminal domain NLG07_04200 PF00375 Sodium:dicarboxylate symporter family NLG07_04210 PF00795 Carbon-nitrogen hydrolase NLG07_04215 PF04371 Porphyromonas-type peptidyl-arginine deiminase NLG07_04225 PF01227 GTP cyclohydrolase I NLG07_04230 PF08212 Lipocalin-like domain NLG07_04245 PF01979 Amidohydrolase family NLG07_04250 PF03880 DbpA RNA binding domain NLG07_04250 PF00270 DEAD/DEAH box helicase NLG07_04250 PF00271 Helicase conserved C-terminal domain NLG07_04260 PF03600 Citrate transporter NLG07_04265 PF03737 Aldolase/RraA NLG07_04270 PF00664 ABC transporter transmembrane region NLG07_04270 PF00005 ABC transporter NLG07_04280 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NLG07_04285 PF00467 KOW motif NLG07_04285 PF02357 Transcription termination factor nusG NLG07_04290 PF00298 Ribosomal protein L11, RNA binding domain NLG07_04290 PF03946 Ribosomal protein L11, N-terminal domain NLG07_04295 PF00687 Ribosomal protein L1p/L10e family NLG07_04300 PF00466 Ribosomal protein L10 NLG07_04305 PF16320 Ribosomal protein L7/L12 dimerisation domain NLG07_04305 PF00542 Ribosomal protein L7/L12 C-terminal domain NLG07_04310 PF04563 RNA polymerase beta subunit NLG07_04310 PF04561 RNA polymerase Rpb2, domain 2 NLG07_04310 PF04565 RNA polymerase Rpb2, domain 3 NLG07_04310 PF10385 RNA polymerase beta subunit external 1 domain NLG07_04310 PF00562 RNA polymerase Rpb2, domain 6 NLG07_04310 PF04560 RNA polymerase Rpb2, domain 7 NLG07_04315 PF04997 RNA polymerase Rpb1, domain 1 NLG07_04315 PF00623 RNA polymerase Rpb1, domain 2 NLG07_04315 PF04983 RNA polymerase Rpb1, domain 3 NLG07_04315 PF05000 RNA polymerase Rpb1, domain 4 NLG07_04315 PF04998 RNA polymerase Rpb1, domain 5 NLG07_04330 PF00164 Ribosomal protein S12/S23 NLG07_04335 PF00177 Ribosomal protein S7p/S5e NLG07_04340 PF00009 Elongation factor Tu GTP binding domain NLG07_04340 PF14492 Elongation Factor G, domain II NLG07_04340 PF00679 Elongation factor G C-terminus NLG07_04340 PF03144 Elongation factor Tu domain 2 NLG07_04340 PF03764 Elongation factor G, domain IV NLG07_04345 PF03143 Elongation factor Tu C-terminal domain NLG07_04345 PF03144 Elongation factor Tu domain 2 NLG07_04345 PF00009 Elongation factor Tu GTP binding domain NLG07_04355 PF00722 Glycosyl hydrolases family 16 NLG07_04360 PF01595 Cyclin M transmembrane N-terminal domain NLG07_04360 PF00571 CBS domain NLG07_04370 PF03600 Citrate transporter NLG07_04375 PF00005 ABC transporter NLG07_04380 PF01061 ABC-2 type transporter NLG07_04385 PF13649 Methyltransferase domain NLG07_04390 PF00282 Pyridoxal-dependent decarboxylase conserved domain NLG07_04395 PF02569 Pantoate-beta-alanine ligase NLG07_04400 PF02548 Ketopantoate hydroxymethyltransferase NLG07_04405 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NLG07_04410 PF01743 Poly A polymerase head domain NLG07_04410 PF12627 Probable RNA and SrmB- binding site of polymerase A NLG07_04410 PF12626 Polymerase A arginine-rich C-terminus NLG07_04415 PF00749 tRNA synthetases class I (E and Q), catalytic domain NLG07_04420 PF01258 Prokaryotic dksA/traR C4-type zinc finger NLG07_04425 PF12404 Peptidase NLG07_04425 PF00883 Cytosol aminopeptidase family, catalytic domain NLG07_04430 PF01914 MarC family integral membrane protein NLG07_04450 PF00005 ABC transporter NLG07_04455 PF18075 FtsX extracellular domain NLG07_04460 PF04545 Sigma-70, region 4 NLG07_04460 PF00140 Sigma-70 factor, region 1.2 NLG07_04460 PF04542 Sigma-70 region 2 NLG07_04465 PF00583 Acetyltransferase (GNAT) family NLG07_04465 PF09500 Putative thioesterase (yiiD_Cterm) NLG07_04470 PF02580 D-Tyr-tRNA(Tyr) deacylase NLG07_04475 PF00561 alpha/beta hydrolase fold NLG07_04485 PF03631 Virulence factor BrkB NLG07_04490 PF02219 Methylenetetrahydrofolate reductase NLG07_04495 PF01340 Met Apo-repressor, MetJ NLG07_04500 PF03949 Malic enzyme, NAD binding domain NLG07_04500 PF00390 Malic enzyme, N-terminal domain NLG07_04505 PF01197 Ribosomal protein L31 NLG07_04510 PF00270 DEAD/DEAH box helicase NLG07_04510 PF00271 Helicase conserved C-terminal domain NLG07_04510 PF17764 3′ DNA-binding domain (3′BD) NLG07_04510 PF18074 Primosomal protein N C-terminal domain NLG07_04510 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NLG07_04515 PF05036 Sporulation related domain NLG07_04520 PF00227 Proteasome subunit NLG07_04525 PF00004 ATPase family associated with various cellular activities (AAA) NLG07_04525 PF07724 AAA domain (Cdc48 subfamily) NLG07_04530 PF00128 Alpha amylase, catalytic domain NLG07_04535 PF00356 Bacterial regulatory proteins, lacI family NLG07_04545 PF01979 Amidohydrolase family NLG07_04550 PF07992 Pyridine nucleotide-disulphide oxidoreductase NLG07_04550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NLG07_04560 PF01432 Peptidase family M3 NLG07_04570 PF01209 ubiE/COQ5 methyltransferase family NLG07_04580 PF03109 ABC1 family NLG07_04590 PF02416 mttA/Hcf106 family NLG07_04595 PF02416 mttA/Hcf106 family NLG07_04600 PF00902 Sec-independent protein translocase protein (TatC) NLG07_04610 PF00490 Delta-aminolevulinic acid dehydratase NLG07_04615 PF02541 Ppx/GppA phosphatase family NLG07_04620 PF00270 DEAD/DEAH box helicase NLG07_04620 PF00271 Helicase conserved C-terminal domain NLG07_04625 PF00085 Thioredoxin NLG07_04630 PF07498 Rho termination factor, N-terminal domain NLG07_04630 PF07497 Rho termination factor, RNA-binding domain NLG07_04630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NLG07_04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NLG07_04635 PF03466 LysR substrate binding domain NLG07_04640 PF00731 AIR carboxylase NLG07_04645 PF02222 ATP-grasp domain NLG07_04645 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NLG07_04655 PF07995 Glucose / Sorbosone dehydrogenase NLG07_04660 PF00849 RNA pseudouridylate synthase NLG07_04665 PF18337 RapA N-terminal Tudor like domain NLG07_04665 PF00176 SNF2 family N-terminal domain NLG07_04665 PF12137 RNA polymerase recycling family C-terminal NLG07_04665 PF18339 RapA N-terminal Tudor like domain 1 NLG07_04665 PF00271 Helicase conserved C-terminal domain NLG07_04670 PF13638 PIN domain NLG07_04670 PF02562 PhoH-like protein NLG07_04680 PF00085 Thioredoxin NLG07_04685 PF00709 Adenylosuccinate synthetase NLG07_04700 PF00933 Glycosyl hydrolase family 3 N terminal domain NLG07_04705 PF07075 Protein of unknown function (DUF1343) NLG07_04710 PF01380 SIS domain NLG07_04715 PF01168 Alanine racemase, N-terminal domain NLG07_04715 PF00842 Alanine racemase, C-terminal domain NLG07_04720 PF00171 Aldehyde dehydrogenase family NLG07_04720 PF01619 Proline dehydrogenase NLG07_04720 PF14850 DNA-binding domain of Proline dehydrogenase NLG07_04720 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NLG07_04725 PF01928 CYTH domain NLG07_04740 PF02976 DNA mismatch repair enzyme MutH NLG07_04745 PF00293 NUDIX domain NLG07_04750 PF00391 PEP-utilising enzyme, mobile domain NLG07_04750 PF02896 PEP-utilising enzyme, TIM barrel domain NLG07_04750 PF05524 PEP-utilising enzyme, N-terminal NLG07_04750 PF01590 GAF domain NLG07_04755 PF01925 Sulfite exporter TauE/SafE NLG07_04760 PF01790 Prolipoprotein diacylglyceryl transferase NLG07_04765 PF00303 Thymidylate synthase NLG07_04775 PF02525 Flavodoxin-like fold NLG07_04780 PF05726 Pirin C-terminal cupin domain NLG07_04780 PF02678 Pirin NLG07_04785 PF07690 Major Facilitator Superfamily NLG07_04790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NLG07_04790 PF10414 Sirohaem synthase dimerisation region NLG07_04795 PF00271 Helicase conserved C-terminal domain NLG07_04795 PF00270 DEAD/DEAH box helicase NLG07_04795 PF12343 Cold shock protein DEAD box A NLG07_04795 PF03880 DbpA RNA binding domain NLG07_04805 PF02321 Outer membrane efflux protein NLG07_04810 PF00293 NUDIX domain NLG07_04820 PF05728 Uncharacterised protein family (UPF0227) NLG07_04825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_04825 PF00204 DNA gyrase B NLG07_04825 PF00986 DNA gyrase B subunit, carboxyl terminus NLG07_04825 PF01751 Toprim domain NLG07_04840 PF04055 Radical SAM superfamily NLG07_04845 PF01132 Elongation factor P (EF-P) OB domain NLG07_04845 PF08207 Elongation factor P (EF-P) KOW-like domain NLG07_04845 PF09285 Elongation factor P, C-terminal NLG07_04850 PF00152 tRNA synthetases class II (D, K and N) NLG07_04865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NLG07_04870 PF05175 Methyltransferase small domain NLG07_04880 PF01722 BolA-like protein NLG07_04885 PF00140 Sigma-70 factor, region 1.2 NLG07_04885 PF04542 Sigma-70 region 2 NLG07_04885 PF04539 Sigma-70 region 3 NLG07_04885 PF04545 Sigma-70, region 4 NLG07_04890 PF01551 Peptidase family M23 NLG07_04890 PF01476 LysM domain NLG07_04895 PF09335 SNARE associated Golgi protein NLG07_04905 PF01975 Survival protein SurE NLG07_04910 PF01142 tRNA pseudouridine synthase D (TruD) NLG07_04915 PF02542 YgbB family NLG07_04920 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NLG07_04925 PF04977 Septum formation initiator NLG07_04935 PF01979 Amidohydrolase family NLG07_04940 PF02803 Thiolase, C-terminal domain NLG07_04940 PF00108 Thiolase, N-terminal domain NLG07_04945 PF00378 Enoyl-CoA hydratase/isomerase NLG07_04945 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NLG07_04945 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NLG07_04950 PF00557 Metallopeptidase family M24 NLG07_04955 PF00348 Polyprenyl synthetase NLG07_04960 PF00829 Ribosomal prokaryotic L21 protein NLG07_04965 PF01016 Ribosomal L27 protein NLG07_04970 PF08534 Redoxin NLG07_04970 PF00462 Glutaredoxin NLG07_04975 PF01018 GTP1/OBG NLG07_04975 PF01926 50S ribosome-binding GTPase NLG07_04980 PF04191 Phospholipid methyltransferase NLG07_04985 PF00186 Dihydrofolate reductase NLG07_04990 PF01435 Peptidase family M48 NLG07_04995 PF05987 Bacterial protein of unknown function (DUF898) NLG07_05005 PF00916 Sulfate permease family NLG07_05005 PF01740 STAS domain NLG07_05025 PF01323 DSBA-like thioredoxin domain NLG07_05030 PF07715 TonB-dependent Receptor Plug Domain NLG07_05030 PF00593 TonB dependent receptor NLG07_05035 PF01636 Phosphotransferase enzyme family NLG07_05040 PF12801 4Fe-4S binding domain NLG07_05040 PF13746 4Fe-4S dicluster domain NLG07_05040 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NLG07_05050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NLG07_05050 PF12806 Acetyl-CoA dehydrogenase C-terminal like NLG07_05050 PF02770 Acyl-CoA dehydrogenase, middle domain NLG07_05050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NLG07_05060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NLG07_05065 PF00873 AcrB/AcrD/AcrF family NLG07_05070 PF04546 Sigma-70, non-essential region NLG07_05070 PF03979 Sigma-70 factor, region 1.1 NLG07_05070 PF00140 Sigma-70 factor, region 1.2 NLG07_05070 PF04542 Sigma-70 region 2 NLG07_05070 PF04539 Sigma-70 region 3 NLG07_05070 PF04545 Sigma-70, region 4 NLG07_05075 PF01807 CHC2 zinc finger NLG07_05075 PF08275 DNA primase catalytic core, N-terminal domain NLG07_05075 PF08278 DNA primase DnaG DnaB-binding NLG07_05075 PF10410 DnaB-helicase binding domain of primase NLG07_05085 PF01165 Ribosomal protein S21 NLG07_05090 PF00814 Glycoprotease family NLG07_05095 PF02660 Glycerol-3-phosphate acyltransferase NLG07_05100 PF02152 Dihydroneopterin aldolase NLG07_05110 PF02673 Bacitracin resistance protein BacA NLG07_05115 PF01230 HIT domain NLG07_05120 PF04381 Putative exonuclease, RdgC NLG07_05125 PF00072 Response regulator receiver domain NLG07_05125 PF00486 Transcriptional regulatory protein, C terminal NLG07_05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_05130 PF00512 His Kinase A (phospho-acceptor) domain NLG07_05130 PF00989 PAS fold NLG07_05130 PF11808 Phosphate regulon sensor protein PhoR NLG07_05135 PF12849 PBP superfamily domain NLG07_05155 PF03806 AbgT putative transporter family NLG07_05160 PF09186 Domain of unknown function (DUF1949) NLG07_05160 PF01205 Uncharacterized protein family UPF0029 NLG07_05165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NLG07_05165 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NLG07_05180 PF00330 Aconitase family (aconitate hydratase) NLG07_05180 PF06434 Aconitate hydratase 2 N-terminus NLG07_05180 PF11791 Aconitate B N-terminal domain NLG07_05185 PF05724 Thiopurine S-methyltransferase (TPMT) NLG07_05190 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NLG07_05190 PF00326 Prolyl oligopeptidase family NLG07_05195 PF03976 Polyphosphate kinase 2 (PPK2) NLG07_05205 PF01618 MotA/TolQ/ExbB proton channel family NLG07_05210 PF01618 MotA/TolQ/ExbB proton channel family NLG07_05215 PF02472 Biopolymer transport protein ExbD/TolR NLG07_05220 PF03544 Gram-negative bacterial TonB protein C-terminal NLG07_05230 PF00326 Prolyl oligopeptidase family NLG07_05230 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NLG07_05240 PF07995 Glucose / Sorbosone dehydrogenase NLG07_05250 PF01842 ACT domain NLG07_05250 PF00696 Amino acid kinase family NLG07_05255 PF00149 Calcineurin-like phosphoesterase NLG07_05260 PF04379 ApaG domain NLG07_05265 PF00398 Ribosomal RNA adenine dimethylase NLG07_05270 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NLG07_05275 PF00639 PPIC-type PPIASE domain NLG07_05275 PF09312 SurA N-terminal domain NLG07_05280 PF03968 OstA-like protein NLG07_05280 PF04453 LPS transport system D NLG07_05285 PF05099 Tellurite resistance protein TerB NLG07_05285 PF00226 DnaJ domain NLG07_05290 PF10411 Disulfide bond isomerase protein N-terminus NLG07_05290 PF13098 Thioredoxin-like domain NLG07_05295 PF01368 DHH family NLG07_05295 PF02272 DHHA1 domain NLG07_05295 PF17768 RecJ OB domain NLG07_05300 PF02565 Recombination protein O C terminal NLG07_05300 PF11967 Recombination protein O N terminal NLG07_05305 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NLG07_05310 PF01648 4'-phosphopantetheinyl transferase superfamily NLG07_05315 PF05958 tRNA (Uracil-5-)-methyltransferase NLG07_05320 PF02824 TGS domain NLG07_05320 PF04607 Region found in RelA / SpoT proteins NLG07_05320 PF13291 ACT domain NLG07_05325 PF03819 MazG nucleotide pyrophosphohydrolase domain NLG07_05330 PF00572 Ribosomal protein L13 NLG07_05335 PF00380 Ribosomal protein S9/S16 NLG07_05340 PF00355 Rieske [2Fe-2S] domain NLG07_05340 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NLG07_05345 PF00033 Cytochrome b/b6/petB NLG07_05345 PF00032 Cytochrome b(C-terminal)/b6/petD NLG07_05350 PF02167 Cytochrome C1 family NLG07_05355 PF00043 Glutathione S-transferase, C-terminal domain NLG07_05355 PF02798 Glutathione S-transferase, N-terminal domain NLG07_05360 PF04386 Stringent starvation protein B NLG07_05365 PF04972 BON domain NLG07_05370 PF13580 SIS domain NLG07_05375 PF02021 Uncharacterised protein family UPF0102 NLG07_05385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NLG07_05390 PF00883 Cytosol aminopeptidase family, catalytic domain NLG07_05390 PF02789 Cytosol aminopeptidase family, N-terminal domain NLG07_05395 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NLG07_05400 PF16653 Saccharopine dehydrogenase C-terminal domain NLG07_05400 PF03435 Saccharopine dehydrogenase NADP binding domain NLG07_05410 PF00291 Pyridoxal-phosphate dependent enzyme NLG07_05435 PF13614 AAA domain NLG07_05440 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NLG07_05455 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NLG07_05460 PF00696 Amino acid kinase family NLG07_05460 PF01842 ACT domain NLG07_05460 PF13840 ACT domain NLG07_05460 PF00742 Homoserine dehydrogenase NLG07_05460 PF03447 Homoserine dehydrogenase, NAD binding domain NLG07_05465 PF08544 GHMP kinases C terminal NLG07_05465 PF00288 GHMP kinases N terminal domain NLG07_05470 PF14821 Threonine synthase N terminus NLG07_05470 PF00291 Pyridoxal-phosphate dependent enzyme NLG07_05475 PF03167 Uracil DNA glycosylase superfamily NLG07_05485 PF00342 Phosphoglucose isomerase NLG07_05490 PF00923 Transaldolase/Fructose-6-phosphate aldolase NLG07_05495 PF03883 Peroxide stress protein YaaA NLG07_05510 PF02325 YGGT family NLG07_05515 PF03807 NADP oxidoreductase coenzyme F420-dependent NLG07_05515 PF14748 Pyrroline-5-carboxylate reductase dimerisation NLG07_05520 PF01168 Alanine racemase, N-terminal domain NLG07_05525 PF00437 Type II/IV secretion system protein NLG07_05535 PF03652 Holliday junction resolvase NLG07_05540 PF02622 Uncharacterized ACR, COG1678 NLG07_05545 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NLG07_05545 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NLG07_05550 PF04452 RNA methyltransferase NLG07_05555 PF05552 Conserved TM helix NLG07_05555 PF00924 Mechanosensitive ion channel NLG07_05560 PF01435 Peptidase family M48 NLG07_05565 PF02773 S-adenosylmethionine synthetase, C-terminal domain NLG07_05565 PF02772 S-adenosylmethionine synthetase, central domain NLG07_05565 PF00438 S-adenosylmethionine synthetase, N-terminal domain NLG07_05570 PF02779 Transketolase, pyrimidine binding domain NLG07_05570 PF02780 Transketolase, C-terminal domain NLG07_05570 PF00456 Transketolase, thiamine diphosphate binding domain NLG07_05575 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NLG07_05575 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NLG07_05580 PF00162 Phosphoglycerate kinase NLG07_05585 PF00274 Fructose-bisphosphate aldolase class-I NLG07_05590 PF02541 Ppx/GppA phosphatase family NLG07_05595 PF13089 Polyphosphate kinase N-terminal domain NLG07_05595 PF02503 Polyphosphate kinase middle domain NLG07_05595 PF17941 Polyphosphate kinase C-terminal domain 1 NLG07_05595 PF13090 Polyphosphate kinase C-terminal domain 2 NLG07_05600 PF00528 Binding-protein-dependent transport system inner membrane component NLG07_05605 PF00528 Binding-protein-dependent transport system inner membrane component NLG07_05610 PF00005 ABC transporter NLG07_05615 PF01895 PhoU domain NLG07_05620 PF01384 Phosphate transporter family NLG07_05625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NLG07_05625 PF03466 LysR substrate binding domain NLG07_05635 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NLG07_05635 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NLG07_05640 PF00512 His Kinase A (phospho-acceptor) domain NLG07_05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_05645 PF02954 Bacterial regulatory protein, Fis family NLG07_05645 PF00072 Response regulator receiver domain NLG07_05645 PF00158 Sigma-54 interaction domain NLG07_05665 PF02381 MraZ protein, putative antitoxin-like NLG07_05670 PF01795 MraW methylase family NLG07_05675 PF04999 Cell division protein FtsL NLG07_05680 PF00905 Penicillin binding protein transpeptidase domain NLG07_05680 PF03717 Penicillin-binding Protein dimerisation domain NLG07_05685 PF02875 Mur ligase family, glutamate ligase domain NLG07_05685 PF08245 Mur ligase middle domain NLG07_05685 PF01225 Mur ligase family, catalytic domain NLG07_05690 PF00953 Glycosyl transferase family 4 NLG07_05690 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NLG07_05695 PF01098 Cell cycle protein NLG07_05700 PF04101 Glycosyltransferase family 28 C-terminal domain NLG07_05700 PF03033 Glycosyltransferase family 28 N-terminal domain NLG07_05705 PF07478 D-ala D-ala ligase C-terminus NLG07_05705 PF01820 D-ala D-ala ligase N-terminus NLG07_05710 PF03799 Cell division protein FtsQ NLG07_05710 PF08478 POTRA domain, FtsQ-type NLG07_05715 PF02491 SHS2 domain inserted in FTSA NLG07_05720 PF00091 Tubulin/FtsZ family, GTPase domain NLG07_05720 PF12327 FtsZ family, C-terminal domain NLG07_05725 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NLG07_05730 PF08525 Opacity-associated protein A N-terminal motif NLG07_05730 PF01551 Peptidase family M23 NLG07_05730 PF01476 LysM domain NLG07_05735 PF02810 SEC-C motif NLG07_05735 PF07517 SecA DEAD-like domain NLG07_05735 PF01043 SecA preprotein cross-linking domain NLG07_05735 PF07516 SecA Wing and Scaffold domain NLG07_05740 PF00293 NUDIX domain NLG07_05745 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NLG07_05750 PF03884 DNA gyrase inhibitor YacG NLG07_05755 PF07072 Cell division protein NLG07_05760 PF01121 Dephospho-CoA kinase NLG07_05765 PF06750 Bacterial Peptidase A24 N-terminal domain NLG07_05765 PF01478 Type IV leader peptidase family NLG07_05770 PF00482 Type II secretion system (T2SS), protein F NLG07_05780 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NLG07_05780 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NLG07_05790 PF01510 N-acetylmuramoyl-L-alanine amidase NLG07_05795 PF03186 CobD/Cbib protein NLG07_05800 PF00392 Bacterial regulatory proteins, gntR family NLG07_05800 PF07729 FCD domain NLG07_05805 PF17831 Pyruvate dehydrogenase E1 component middle domain NLG07_05805 PF00456 Transketolase, thiamine diphosphate binding domain NLG07_05810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NLG07_05810 PF00364 Biotin-requiring enzyme NLG07_05810 PF02817 e3 binding domain NLG07_05815 PF07992 Pyridine nucleotide-disulphide oxidoreductase NLG07_05815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NLG07_05820 PF06945 Protein of unknown function (DUF1289) NLG07_05830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NLG07_05830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NLG07_05835 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NLG07_05845 PF01156 Inosine-uridine preferring nucleoside hydrolase NLG07_05850 PF00294 pfkB family carbohydrate kinase NLG07_05860 PF03695 Uncharacterised protein family (UPF0149) NLG07_05865 PF05195 Aminopeptidase P, N-terminal domain NLG07_05865 PF00557 Metallopeptidase family M24 NLG07_05870 PF01494 FAD binding domain NLG07_05875 PF13401 AAA domain NLG07_05875 PF01471 Putative peptidoglycan binding domain NLG07_05885 PF13614 AAA domain NLG07_05900 PF02397 Bacterial sugar transferase NLG07_05905 PF01522 Polysaccharide deacetylase NLG07_05915 PF13439 Glycosyltransferase Family 4 NLG07_05935 PF00534 Glycosyl transferases group 1 NLG07_05935 PF13439 Glycosyltransferase Family 4 NLG07_05950 PF01943 Polysaccharide biosynthesis protein NLG07_05960 PF13439 Glycosyltransferase Family 4 NLG07_05960 PF00534 Glycosyl transferases group 1 NLG07_05965 PF13537 Glutamine amidotransferase domain NLG07_05965 PF00733 Asparagine synthase NLG07_06050 PF01370 NAD dependent epimerase/dehydratase family NLG07_06055 PF01274 Malate synthase NLG07_06060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NLG07_06060 PF03466 LysR substrate binding domain NLG07_06065 PF00463 Isocitrate lyase family NLG07_06070 PF00245 Alkaline phosphatase NLG07_06080 PF03738 Glutathionylspermidine synthase preATP-grasp NLG07_06085 PF06693 Protein of unknown function (DUF1190) NLG07_06090 PF03994 Domain of Unknown Function (DUF350) NLG07_06100 PF02547 Queuosine biosynthesis protein NLG07_06105 PF01702 Queuine tRNA-ribosyltransferase NLG07_06110 PF02699 Preprotein translocase subunit NLG07_06115 PF07549 SecD/SecF GG Motif NLG07_06115 PF13721 SecD export protein N-terminal TM region NLG07_06115 PF02355 Protein export membrane protein NLG07_06120 PF07549 SecD/SecF GG Motif NLG07_06120 PF02355 Protein export membrane protein NLG07_06125 PF00459 Inositol monophosphatase family NLG07_06130 PF00588 SpoU rRNA Methylase family NLG07_06135 PF06426 Serine acetyltransferase, N-terminal NLG07_06135 PF00132 Bacterial transferase hexapeptide (six repeats) NLG07_06140 PF02082 Transcriptional regulator NLG07_06145 PF00266 Aminotransferase class-V NLG07_06150 PF01592 NifU-like N terminal domain NLG07_06155 PF01521 Iron-sulphur cluster biosynthesis NLG07_06160 PF07743 HSCB C-terminal oligomerisation domain NLG07_06165 PF00012 Hsp70 protein NLG07_06170 PF00111 2Fe-2S iron-sulfur cluster binding domain NLG07_06175 PF00334 Nucleoside diphosphate kinase NLG07_06180 PF04055 Radical SAM superfamily NLG07_06185 PF01476 LysM domain NLG07_06185 PF08239 Bacterial SH3 domain NLG07_06185 PF00877 NlpC/P60 family NLG07_06190 PF13464 Domain of unknown function (DUF4115) NLG07_06195 PF04551 GcpE protein NLG07_06200 PF03129 Anticodon binding domain NLG07_06200 PF13393 Histidyl-tRNA synthetase NLG07_06205 PF09976 Tetratricopeptide repeat-like domain NLG07_06210 PF13360 PQQ-like domain NLG07_06215 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NLG07_06215 PF01926 50S ribosome-binding GTPase NLG07_06220 PF02601 Exonuclease VII, large subunit NLG07_06220 PF13742 OB-fold nucleic acid binding domain NLG07_06225 PF00478 IMP dehydrogenase / GMP reductase domain NLG07_06225 PF00571 CBS domain NLG07_06230 PF00117 Glutamine amidotransferase class-I NLG07_06230 PF00958 GMP synthase C terminal domain NLG07_06230 PF02540 NAD synthase NLG07_06235 PF02253 Phospholipase A1 NLG07_06240 PF03129 Anticodon binding domain NLG07_06240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NLG07_06240 PF04073 Aminoacyl-tRNA editing domain NLG07_06245 PF01980 tRNA-methyltransferase O NLG07_06245 PF18389 TrmO C-terminal domain NLG07_06255 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NLG07_06255 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NLG07_06285 PF00005 ABC transporter NLG07_06285 PF03412 Peptidase C39 family NLG07_06285 PF00664 ABC transporter transmembrane region NLG07_06290 PF05384 Sensor protein DegS NLG07_06290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_06290 PF07730 Histidine kinase NLG07_06315 PF05698 Bacterial trigger factor protein (TF) C-terminus NLG07_06315 PF05697 Bacterial trigger factor protein (TF) NLG07_06315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NLG07_06320 PF00574 Clp protease NLG07_06325 PF07724 AAA domain (Cdc48 subfamily) NLG07_06325 PF10431 C-terminal, D2-small domain, of ClpB protein NLG07_06325 PF06689 ClpX C4-type zinc finger NLG07_06330 PF00004 ATPase family associated with various cellular activities (AAA) NLG07_06330 PF05362 Lon protease (S16) C-terminal proteolytic domain NLG07_06330 PF02190 ATP-dependent protease La (LON) substrate-binding domain NLG07_06335 PF00216 Bacterial DNA-binding protein NLG07_06350 PF02690 Na+/Pi-cotransporter NLG07_06355 PF04389 Peptidase family M28 NLG07_06355 PF02225 PA domain NLG07_06360 PF01649 Ribosomal protein S20 NLG07_06365 PF03023 Lipid II flippase MurJ NLG07_06370 PF06574 FAD synthetase NLG07_06370 PF01687 Riboflavin kinase NLG07_06375 PF06827 Zinc finger found in FPG and IleRS NLG07_06375 PF00133 tRNA synthetases class I (I, L, M and V) NLG07_06375 PF08264 Anticodon-binding domain of tRNA NLG07_06380 PF01252 Signal peptidase (SPase) II NLG07_06385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NLG07_06390 PF02401 LytB protein NLG07_06410 PF05567 Neisseria PilC beta-propeller domain NLG07_06415 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NLG07_06415 PF07963 Prokaryotic N-terminal methylation motif NLG07_06425 PF02540 NAD synthase NLG07_06430 PF00543 Nitrogen regulatory protein P-II NLG07_06435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NLG07_06445 PF03937 Flavinator of succinate dehydrogenase NLG07_06455 PF02910 Fumarate reductase flavoprotein C-term NLG07_06455 PF00890 FAD binding domain NLG07_06460 PF04542 Sigma-70 region 2 NLG07_06460 PF08281 Sigma-70, region 4 NLG07_06470 PF03888 MucB/RseB N-terminal domain NLG07_06470 PF17188 MucB/RseB C-terminal domain NLG07_06480 PF00679 Elongation factor G C-terminus NLG07_06480 PF03144 Elongation factor Tu domain 2 NLG07_06480 PF06421 GTP-binding protein LepA C-terminus NLG07_06480 PF00009 Elongation factor Tu GTP binding domain NLG07_06485 PF10502 Signal peptidase, peptidase S26 NLG07_06490 PF00035 Double-stranded RNA binding motif NLG07_06490 PF14622 Ribonuclease-III-like NLG07_06495 PF07650 KH domain NLG07_06495 PF01926 50S ribosome-binding GTPase NLG07_06500 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NLG07_06500 PF01243 Pyridoxamine 5'-phosphate oxidase NLG07_06505 PF01026 TatD related DNase NLG07_06515 PF18429 Domain of unknown function (DUF5609) NLG07_06520 PF18073 Rubredoxin metal binding domain NLG07_06525 PF00313 'Cold-shock' DNA-binding domain NLG07_06530 PF00005 ABC transporter NLG07_06530 PF12848 ABC transporter NLG07_06535 PF00132 Bacterial transferase hexapeptide (six repeats) NLG07_06535 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NLG07_06540 PF00464 Serine hydroxymethyltransferase NLG07_06545 PF03477 ATP cone domain NLG07_06550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NLG07_06550 PF01872 RibD C-terminal domain NLG07_06555 PF00677 Lumazine binding domain NLG07_06560 PF00925 GTP cyclohydrolase II NLG07_06560 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NLG07_06565 PF00885 6,7-dimethyl-8-ribityllumazine synthase NLG07_06570 PF01029 NusB family NLG07_06575 PF02769 AIR synthase related protein, C-terminal domain NLG07_06575 PF00586 AIR synthase related protein, N-terminal domain NLG07_06580 PF04608 Phosphatidylglycerophosphatase A NLG07_06585 PF02779 Transketolase, pyrimidine binding domain NLG07_06585 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NLG07_06585 PF02780 Transketolase, C-terminal domain NLG07_06590 PF00348 Polyprenyl synthetase NLG07_06595 PF02609 Exonuclease VII small subunit NLG07_06615 PF00106 short chain dehydrogenase NLG07_06630 PF04545 Sigma-70, region 4 NLG07_06630 PF04542 Sigma-70 region 2 NLG07_06635 PF12973 ChrR Cupin-like domain NLG07_06640 PF13525 Outer membrane lipoprotein NLG07_06645 PF00849 RNA pseudouridylate synthase NLG07_06645 PF01479 S4 domain NLG07_06650 PF00004 ATPase family associated with various cellular activities (AAA) NLG07_06650 PF07724 AAA domain (Cdc48 subfamily) NLG07_06650 PF17871 AAA lid domain NLG07_06650 PF02861 Clp amino terminal domain, pathogenicity island component NLG07_06650 PF10431 C-terminal, D2-small domain, of ClpB protein NLG07_06655 PF01066 CDP-alcohol phosphatidyltransferase NLG07_06680 PF04277 Oxaloacetate decarboxylase, gamma chain NLG07_06685 PF00682 HMGL-like NLG07_06685 PF00364 Biotin-requiring enzyme NLG07_06685 PF02436 Conserved carboxylase domain NLG07_06690 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NLG07_06695 PF00005 ABC transporter NLG07_06700 PF00005 ABC transporter NLG07_06700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NLG07_06705 PF00528 Binding-protein-dependent transport system inner membrane component NLG07_06705 PF12911 N-terminal TM domain of oligopeptide transport permease C NLG07_06710 PF00528 Binding-protein-dependent transport system inner membrane component NLG07_06715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NLG07_06720 PF02954 Bacterial regulatory protein, Fis family NLG07_06720 PF00158 Sigma-54 interaction domain NLG07_06725 PF04012 PspA/IM30 family NLG07_06730 PF06667 Phage shock protein B NLG07_06735 PF04024 PspC domain NLG07_06740 PF00158 Sigma-54 interaction domain NLG07_06740 PF18024 Helix-turn-helix domain NLG07_06745 PF14497 Glutathione S-transferase, C-terminal domain NLG07_06745 PF02798 Glutathione S-transferase, N-terminal domain NLG07_06750 PF01037 Lrp/AsnC ligand binding domain NLG07_06755 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NLG07_06755 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NLG07_06765 PF07715 TonB-dependent Receptor Plug Domain NLG07_06765 PF00593 TonB dependent receptor NLG07_06785 PF01618 MotA/TolQ/ExbB proton channel family NLG07_06790 PF01618 MotA/TolQ/ExbB proton channel family NLG07_06795 PF02472 Biopolymer transport protein ExbD/TolR NLG07_06800 PF03544 Gram-negative bacterial TonB protein C-terminal NLG07_06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_06825 PF04973 Nicotinamide mononucleotide transporter NLG07_06840 PF02357 Transcription termination factor nusG NLG07_06845 PF13230 Glutamine amidotransferases class-II NLG07_06860 PF13378 Enolase C-terminal domain-like NLG07_06860 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NLG07_06865 PF00596 Class II Aldolase and Adducin N-terminal domain NLG07_06870 PF13673 Acetyltransferase (GNAT) domain NLG07_06880 PF01740 STAS domain NLG07_06890 PF02563 Polysaccharide biosynthesis/export protein NLG07_06890 PF10531 SLBB domain NLG07_06900 PF00072 Response regulator receiver domain NLG07_06900 PF00486 Transcriptional regulatory protein, C terminal NLG07_06910 PF00534 Glycosyl transferases group 1 NLG07_06910 PF13439 Glycosyltransferase Family 4 NLG07_06930 PF03707 Bacterial signalling protein N terminal repeat NLG07_06930 PF00990 Diguanylate cyclase, GGDEF domain NLG07_06930 PF00563 EAL domain NLG07_06955 PF00534 Glycosyl transferases group 1 NLG07_06955 PF13439 Glycosyltransferase Family 4 NLG07_06960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NLG07_06960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NLG07_06960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NLG07_06960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NLG07_06965 PF00107 Zinc-binding dehydrogenase NLG07_06965 PF08240 Alcohol dehydrogenase GroES-like domain NLG07_06970 PF16177 Acetyl-coenzyme A synthetase N-terminus NLG07_06970 PF00501 AMP-binding enzyme NLG07_06970 PF13193 AMP-binding enzyme C-terminal domain NLG07_06975 PF01145 SPFH domain / Band 7 family NLG07_06995 PF03831 PhnA domain NLG07_06995 PF08274 PhnA Zinc-Ribbon NLG07_07000 PF00009 Elongation factor Tu GTP binding domain NLG07_07000 PF03144 Elongation factor Tu domain 2 NLG07_07000 PF16658 Class II release factor RF3, C-terminal domain NLG07_07005 PF03485 Arginyl tRNA synthetase N terminal domain NLG07_07005 PF05746 DALR anticodon binding domain NLG07_07005 PF00750 tRNA synthetases class I (R) NLG07_07010 PF03358 NADPH-dependent FMN reductase NLG07_07020 PF00152 tRNA synthetases class II (D, K and N) NLG07_07020 PF01336 OB-fold nucleic acid binding domain NLG07_07025 PF08546 Ketopantoate reductase PanE/ApbA C terminal NLG07_07025 PF02558 Ketopantoate reductase PanE/ApbA NLG07_07030 PF00849 RNA pseudouridylate synthase NLG07_07040 PF04262 Glutamate-cysteine ligase NLG07_07055 PF01713 Smr domain NLG07_07060 PF05175 Methyltransferase small domain NLG07_07065 PF01264 Chorismate synthase NLG07_07070 PF04293 SpoVR like protein NLG07_07075 PF04285 Protein of unknown function (DUF444) NLG07_07080 PF06798 PrkA serine protein kinase C-terminal domain NLG07_07080 PF08298 PrkA AAA domain NLG07_07085 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NLG07_07085 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NLG07_07090 PF00462 Glutaredoxin NLG07_07095 PF04324 BFD-like [2Fe-2S] binding domain NLG07_07100 PF00929 Exonuclease NLG07_07105 PF10576 Iron-sulfur binding domain of endonuclease III NLG07_07105 PF00633 Helix-hairpin-helix motif NLG07_07105 PF00730 HhH-GPD superfamily base excision DNA repair protein NLG07_07110 PF02508 Rnf-Nqr subunit, membrane protein NLG07_07115 PF04205 FMN-binding domain NLG07_07120 PF03116 NQR2, RnfD, RnfE family NLG07_07125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NLG07_07125 PF12838 4Fe-4S dicluster domain NLG07_07125 PF13375 RnfC Barrel sandwich hybrid domain NLG07_07125 PF10531 SLBB domain NLG07_07130 PF04060 Putative Fe-S cluster NLG07_07135 PF02508 Rnf-Nqr subunit, membrane protein NLG07_07150 PF01554 MatE NLG07_07155 PF00271 Helicase conserved C-terminal domain NLG07_07155 PF04851 Type III restriction enzyme, res subunit NLG07_07155 PF02151 UvrB/uvrC motif NLG07_07155 PF12344 Ultra-violet resistance protein B NLG07_07155 PF17757 UvrB interaction domain NLG07_07160 PF06508 Queuosine biosynthesis protein QueC NLG07_07165 PF04055 Radical SAM superfamily NLG07_07175 PF00733 Asparagine synthase NLG07_07175 PF13537 Glutamine amidotransferase domain NLG07_07190 PF00005 ABC transporter NLG07_07195 PF12679 ABC-2 family transporter protein NLG07_07200 PF01925 Sulfite exporter TauE/SafE NLG07_07205 PF00753 Metallo-beta-lactamase superfamily NLG07_07215 PF03600 Citrate transporter NLG07_07215 PF02080 TrkA-C domain NLG07_07220 PF00009 Elongation factor Tu GTP binding domain NLG07_07225 PF00459 Inositol monophosphatase family NLG07_07235 PF01507 Phosphoadenosine phosphosulfate reductase family NLG07_07240 PF00474 Sodium:solute symporter family NLG07_07255 PF13519 von Willebrand factor type A domain NLG07_07270 PF01882 Protein of unknown function DUF58 NLG07_07275 PF07726 ATPase family associated with various cellular activities (AAA) NLG07_07275 PF17863 AAA lid domain NLG07_07280 PF02803 Thiolase, C-terminal domain NLG07_07280 PF00108 Thiolase, N-terminal domain NLG07_07285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NLG07_07285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NLG07_07285 PF00378 Enoyl-CoA hydratase/isomerase NLG07_07310 PF01595 Cyclin M transmembrane N-terminal domain NLG07_07310 PF03471 Transporter associated domain NLG07_07310 PF00571 CBS domain NLG07_07320 PF02978 Signal peptide binding domain NLG07_07320 PF00448 SRP54-type protein, GTPase domain NLG07_07320 PF02881 SRP54-type protein, helical bundle domain NLG07_07325 PF00886 Ribosomal protein S16 NLG07_07330 PF05239 PRC-barrel domain NLG07_07330 PF01782 RimM N-terminal domain NLG07_07335 PF01746 tRNA (Guanine-1)-methyltransferase NLG07_07340 PF01245 Ribosomal protein L19 NLG07_07345 PF04539 Sigma-70 region 3 NLG07_07345 PF04545 Sigma-70, region 4 NLG07_07345 PF04542 Sigma-70 region 2 NLG07_07350 PF04204 Homoserine O-succinyltransferase NLG07_07355 PF02310 B12 binding domain NLG07_07355 PF02607 B12 binding domain NLG07_07355 PF00809 Pterin binding enzyme NLG07_07355 PF02965 Vitamin B12 dependent methionine synthase, activation domain NLG07_07355 PF02574 Homocysteine S-methyltransferase NLG07_07360 PF02607 B12 binding domain NLG07_07360 PF02965 Vitamin B12 dependent methionine synthase, activation domain NLG07_07360 PF00809 Pterin binding enzyme NLG07_07360 PF02574 Homocysteine S-methyltransferase NLG07_07360 PF02310 B12 binding domain NLG07_07370 PF01431 Peptidase family M13 NLG07_07370 PF05649 Peptidase family M13 NLG07_07380 PF02631 RecX family NLG07_07385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NLG07_07385 PF02272 DHHA1 domain NLG07_07385 PF01411 tRNA synthetases class II (A) NLG07_07390 PF02599 Global regulator protein family NLG07_07425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_07425 PF00512 His Kinase A (phospho-acceptor) domain NLG07_07425 PF00497 Bacterial extracellular solute-binding proteins, family 3 NLG07_07440 PF00156 Phosphoribosyl transferase domain NLG07_07445 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NLG07_07445 PF12170 DNA polymerase III tau subunit V interacting with alpha NLG07_07445 PF12169 DNA polymerase III subunits gamma and tau domain III NLG07_07450 PF02575 YbaB/EbfC DNA-binding family NLG07_07455 PF02132 RecR protein NLG07_07455 PF13662 Toprim domain NLG07_07460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_07460 PF00183 Hsp90 protein NLG07_07465 PF05191 Adenylate kinase, active site lid NLG07_07470 PF01625 Peptide methionine sulfoxide reductase NLG07_07485 PF00011 Hsp20/alpha crystallin family NLG07_07490 PF04193 PQ loop repeat NLG07_07505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NLG07_07505 PF07992 Pyridine nucleotide-disulphide oxidoreductase NLG07_07515 PF13649 Methyltransferase domain NLG07_07520 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NLG07_07520 PF01502 Phosphoribosyl-AMP cyclohydrolase NLG07_07525 PF00977 Histidine biosynthesis protein NLG07_07535 PF00795 Carbon-nitrogen hydrolase NLG07_07535 PF00583 Acetyltransferase (GNAT) family NLG07_07540 PF00593 TonB dependent receptor NLG07_07540 PF07715 TonB-dependent Receptor Plug Domain NLG07_07550 PF06865 Pyrimidine/purine nucleoside phosphorylase NLG07_07555 PF13378 Enolase C-terminal domain-like NLG07_07555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NLG07_07565 PF00873 AcrB/AcrD/AcrF family NLG07_07570 PF13533 Biotin-lipoyl like NLG07_07580 PF00152 tRNA synthetases class II (D, K and N) NLG07_07580 PF01336 OB-fold nucleic acid binding domain NLG07_07585 PF00202 Aminotransferase class-III NLG07_07590 PF06968 Biotin and Thiamin Synthesis associated domain NLG07_07590 PF04055 Radical SAM superfamily NLG07_07595 PF00155 Aminotransferase class I and II NLG07_07600 PF08241 Methyltransferase domain NLG07_07620 PF03575 Peptidase family S51 NLG07_07640 PF00072 Response regulator receiver domain NLG07_07640 PF00158 Sigma-54 interaction domain NLG07_07640 PF02954 Bacterial regulatory protein, Fis family NLG07_07645 PF01654 Cytochrome bd terminal oxidase subunit I NLG07_07650 PF02322 Cytochrome bd terminal oxidase subunit II NLG07_07655 PF08173 Membrane bound YbgT-like protein NLG07_07660 PF00005 ABC transporter NLG07_07660 PF00664 ABC transporter transmembrane region NLG07_07665 PF00005 ABC transporter NLG07_07665 PF00664 ABC transporter transmembrane region NLG07_07670 PF01451 Low molecular weight phosphotyrosine protein phosphatase NLG07_07675 PF01032 FecCD transport family NLG07_07680 PF00005 ABC transporter NLG07_07685 PF01474 Class-II DAHP synthetase family NLG07_07690 PF00664 ABC transporter transmembrane region NLG07_07690 PF00005 ABC transporter NLG07_07695 PF01022 Bacterial regulatory protein, arsR family NLG07_07710 PF02646 RmuC family NLG07_07720 PF02563 Polysaccharide biosynthesis/export protein NLG07_07720 PF10531 SLBB domain NLG07_07720 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NLG07_07725 PF01451 Low molecular weight phosphotyrosine protein phosphatase NLG07_07730 PF13614 AAA domain NLG07_07730 PF13807 G-rich domain on putative tyrosine kinase NLG07_07730 PF02706 Chain length determinant protein NLG07_07750 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NLG07_07755 PF02719 Polysaccharide biosynthesis protein NLG07_07760 PF02348 Cytidylyltransferase NLG07_07770 PF03102 NeuB family NLG07_07770 PF08666 SAF domain NLG07_07775 PF00535 Glycosyl transferase family 2 NLG07_07790 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NLG07_07790 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NLG07_07790 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NLG07_07835 PF00534 Glycosyl transferases group 1 NLG07_07840 PF16363 GDP-mannose 4,6 dehydratase NLG07_07845 PF01370 NAD dependent epimerase/dehydratase family NLG07_07850 PF00293 NUDIX domain NLG07_07855 PF00483 Nucleotidyl transferase NLG07_07855 PF01050 Mannose-6-phosphate isomerase NLG07_07860 PF03808 Glycosyl transferase WecB/TagA/CpsF family NLG07_07865 PF16363 GDP-mannose 4,6 dehydratase NLG07_07870 PF00953 Glycosyl transferase family 4 NLG07_07880 PF00953 Glycosyl transferase family 4 NLG07_07905 PF03150 Di-haem cytochrome c peroxidase NLG07_07925 PF00196 Bacterial regulatory proteins, luxR family NLG07_07970 PF00196 Bacterial regulatory proteins, luxR family NLG07_07970 PF00072 Response regulator receiver domain NLG07_07975 PF00196 Bacterial regulatory proteins, luxR family NLG07_07975 PF00072 Response regulator receiver domain NLG07_07985 PF02574 Homocysteine S-methyltransferase NLG07_07985 PF02219 Methylenetetrahydrofolate reductase NLG07_07990 PF00128 Alpha amylase, catalytic domain NLG07_07990 PF17999 Pullulanase N1-terminal domain NLG07_07990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NLG07_07995 PF16338 Domain of unknown function (DUF4968) NLG07_07995 PF17137 Domain of unknown function (DUF5110) NLG07_07995 PF13802 Galactose mutarotase-like NLG07_07995 PF01055 Glycosyl hydrolases family 31 NLG07_08000 PF00072 Response regulator receiver domain NLG07_08000 PF00486 Transcriptional regulatory protein, C terminal NLG07_08010 PF00990 Diguanylate cyclase, GGDEF domain NLG07_08010 PF00563 EAL domain NLG07_08010 PF03707 Bacterial signalling protein N terminal repeat NLG07_08015 PF01112 Asparaginase NLG07_08020 PF00271 Helicase conserved C-terminal domain NLG07_08020 PF04408 Helicase associated domain (HA2) NLG07_08020 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NLG07_08020 PF00270 DEAD/DEAH box helicase NLG07_08020 PF11898 Domain of unknown function (DUF3418) NLG07_08030 PF00075 RNase H NLG07_08035 PF00929 Exonuclease NLG07_08065 PF00128 Alpha amylase, catalytic domain NLG07_08070 PF00005 ABC transporter NLG07_08075 PF02687 FtsX-like permease family NLG07_08075 PF12704 MacB-like periplasmic core domain NLG07_08080 PF00375 Sodium:dicarboxylate symporter family NLG07_08085 PF04996 Succinylarginine dihydrolase NLG07_08090 PF01396 Topoisomerase DNA binding C4 zinc finger NLG07_08090 PF08272 Topoisomerase I zinc-ribbon-like NLG07_08090 PF01131 DNA topoisomerase NLG07_08090 PF01751 Toprim domain NLG07_08095 PF12111 Polyribonucleotide phosphorylase C terminal NLG07_08095 PF10150 Ribonuclease E/G family NLG07_08095 PF00575 S1 RNA binding domain NLG07_08100 PF01479 S4 domain NLG07_08100 PF00849 RNA pseudouridylate synthase NLG07_08105 PF13419 Haloacid dehalogenase-like hydrolase NLG07_08110 PF02545 Maf-like protein NLG07_08115 PF02620 Large ribosomal RNA subunit accumulation protein YceD NLG07_08120 PF01783 Ribosomal L32p protein family NLG07_08125 PF02504 Fatty acid synthesis protein NLG07_08130 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NLG07_08130 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NLG07_08135 PF00698 Acyl transferase domain NLG07_08145 PF00550 Phosphopantetheine attachment site NLG07_08150 PF00109 Beta-ketoacyl synthase, N-terminal domain NLG07_08150 PF02801 Beta-ketoacyl synthase, C-terminal domain NLG07_08155 PF01063 Amino-transferase class IV NLG07_08160 PF02618 YceG-like family NLG07_08165 PF02223 Thymidylate kinase NLG07_08170 PF09115 DNA polymerase III, delta subunit, C terminal NLG07_08175 PF01026 TatD related DNase NLG07_08190 PF01966 HD domain NLG07_08190 PF13286 Phosphohydrolase-associated domain NLG07_08195 PF08448 PAS fold NLG07_08195 PF03705 CheR methyltransferase, all-alpha domain NLG07_08195 PF01739 CheR methyltransferase, SAM binding domain NLG07_08195 PF01339 CheB methylesterase NLG07_08200 PF00512 His Kinase A (phospho-acceptor) domain NLG07_08200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_08200 PF09456 RcsC Alpha-Beta-Loop (ABL) NLG07_08200 PF00072 Response regulator receiver domain NLG07_08210 PF00155 Aminotransferase class I and II NLG07_08225 PF11893 Domain of unknown function (DUF3413) NLG07_08225 PF00884 Sulfatase NLG07_08230 PF07208 Protein of unknown function (DUF1414) NLG07_08235 PF04245 37-kD nucleoid-associated bacterial protein NLG07_08245 PF00581 Rhodanese-like domain NLG07_08245 PF17773 UPF0176 acylphosphatase like domain NLG07_08255 PF00271 Helicase conserved C-terminal domain NLG07_08255 PF00270 DEAD/DEAH box helicase NLG07_08260 PF01144 Coenzyme A transferase NLG07_08265 PF01144 Coenzyme A transferase NLG07_08270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NLG07_08270 PF03466 LysR substrate binding domain NLG07_08275 PF03466 LysR substrate binding domain NLG07_08275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NLG07_08280 PF03315 Serine dehydratase beta chain NLG07_08280 PF03313 Serine dehydratase alpha chain NLG07_08290 PF00425 chorismate binding enzyme NLG07_08290 PF04715 Anthranilate synthase component I, N terminal region NLG07_08300 PF13509 S1 domain NLG07_08300 PF17783 CvfB-like winged helix domain NLG07_08305 PF03746 LamB/YcsF family NLG07_08310 PF02682 Carboxyltransferase domain, subdomain C and D NLG07_08315 PF02626 Carboxyltransferase domain, subdomain A and B NLG07_08320 PF01475 Ferric uptake regulator family NLG07_08325 PF00258 Flavodoxin NLG07_08335 PF12697 Alpha/beta hydrolase family NLG07_08350 PF01012 Electron transfer flavoprotein domain NLG07_08355 PF00766 Electron transfer flavoprotein FAD-binding domain NLG07_08355 PF01012 Electron transfer flavoprotein domain NLG07_08365 PF00529 HlyD membrane-fusion protein of T1SS NLG07_08365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NLG07_08370 PF00873 AcrB/AcrD/AcrF family NLG07_08375 PF07715 TonB-dependent Receptor Plug Domain NLG07_08375 PF00593 TonB dependent receptor NLG07_08380 PF02770 Acyl-CoA dehydrogenase, middle domain NLG07_08380 PF12806 Acetyl-CoA dehydrogenase C-terminal like NLG07_08380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NLG07_08380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NLG07_08390 PF00155 Aminotransferase class I and II NLG07_08400 PF01053 Cys/Met metabolism PLP-dependent enzyme NLG07_08410 PF00255 Glutathione peroxidase NLG07_08425 PF00378 Enoyl-CoA hydratase/isomerase NLG07_08430 PF00291 Pyridoxal-phosphate dependent enzyme NLG07_08450 PF00111 2Fe-2S iron-sulfur cluster binding domain NLG07_08455 PF00268 Ribonucleotide reductase, small chain NLG07_08460 PF02867 Ribonucleotide reductase, barrel domain NLG07_08460 PF00317 Ribonucleotide reductase, all-alpha domain NLG07_08460 PF03477 ATP cone domain NLG07_08470 PF03989 DNA gyrase C-terminal domain, beta-propeller NLG07_08470 PF00521 DNA gyrase/topoisomerase IV, subunit A NLG07_08475 PF00266 Aminotransferase class-V NLG07_08480 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NLG07_08485 PF02224 Cytidylate kinase NLG07_08490 PF00575 S1 RNA binding domain NLG07_08495 PF00216 Bacterial DNA-binding protein NLG07_08500 PF06305 Lipopolysaccharide assembly protein A domain NLG07_08505 PF18073 Rubredoxin metal binding domain NLG07_08510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NLG07_08515 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NLG07_08515 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NLG07_08520 PF01037 Lrp/AsnC ligand binding domain NLG07_08530 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NLG07_08530 PF17854 FtsK alpha domain NLG07_08530 PF09397 Ftsk gamma domain NLG07_08530 PF01580 FtsK/SpoIIIE family NLG07_08535 PF03548 Outer membrane lipoprotein carrier protein LolA NLG07_08540 PF00004 ATPase family associated with various cellular activities (AAA) NLG07_08540 PF16193 AAA C-terminal domain NLG07_08540 PF12002 MgsA AAA+ ATPase C terminal NLG07_08545 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NLG07_08550 PF02403 Seryl-tRNA synthetase N-terminal domain NLG07_08550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NLG07_08555 PF04358 DsrC like protein NLG07_08570 PF01027 Inhibitor of apoptosis-promoting Bax1 NLG07_08580 PF00072 Response regulator receiver domain NLG07_08580 PF00196 Bacterial regulatory proteins, luxR family NLG07_08585 PF01541 GIY-YIG catalytic domain NLG07_08585 PF02151 UvrB/uvrC motif NLG07_08585 PF08459 UvrC Helix-hairpin-helix N-terminal NLG07_08590 PF01066 CDP-alcohol phosphatidyltransferase NLG07_08615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NLG07_08620 PF00873 AcrB/AcrD/AcrF family NLG07_08625 PF01810 LysE type translocator NLG07_08645 PF01734 Patatin-like phospholipase NLG07_08655 PF00582 Universal stress protein family NLG07_08660 PF00027 Cyclic nucleotide-binding domain NLG07_08660 PF13545 Crp-like helix-turn-helix domain NLG07_08670 PF03597 Cytochrome oxidase maturation protein cbb3-type NLG07_08675 PF00403 Heavy-metal-associated domain NLG07_08685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NLG07_08685 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NLG07_08700 PF00115 Cytochrome C and Quinol oxidase polypeptide I NLG07_08710 PF00210 Ferritin-like domain NLG07_08715 PF00210 Ferritin-like domain NLG07_08720 PF00999 Sodium/hydrogen exchanger family NLG07_08720 PF02254 TrkA-N domain NLG07_08735 PF00743 Flavin-binding monooxygenase-like NLG07_08750 PF00005 ABC transporter NLG07_08765 PF13360 PQQ-like domain NLG07_08765 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NLG07_08775 PF13360 PQQ-like domain NLG07_08775 PF01011 PQQ enzyme repeat NLG07_08780 PF00171 Aldehyde dehydrogenase family NLG07_08785 PF04205 FMN-binding domain NLG07_08785 PF12801 4Fe-4S binding domain NLG07_08795 PF09456 RcsC Alpha-Beta-Loop (ABL) NLG07_08795 PF00072 Response regulator receiver domain NLG07_08795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_08795 PF00512 His Kinase A (phospho-acceptor) domain NLG07_08800 PF00072 Response regulator receiver domain NLG07_08800 PF00196 Bacterial regulatory proteins, luxR family NLG07_08810 PF00005 ABC transporter NLG07_08855 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NLG07_08860 PF00875 DNA photolyase NLG07_08860 PF03441 FAD binding domain of DNA photolyase NLG07_08865 PF03441 FAD binding domain of DNA photolyase NLG07_08865 PF00875 DNA photolyase NLG07_08870 PF03441 FAD binding domain of DNA photolyase NLG07_08870 PF00875 DNA photolyase NLG07_08880 PF07977 FabA-like domain NLG07_08885 PF04957 Ribosome modulation factor NLG07_08895 PF00005 ABC transporter NLG07_08895 PF12848 ABC transporter NLG07_08895 PF16326 ABC transporter C-terminal domain NLG07_08905 PF01170 Putative RNA methylase family UPF0020 NLG07_08905 PF10672 S-adenosylmethionine-dependent methyltransferase NLG07_08905 PF02926 THUMP domain NLG07_08910 PF01180 Dihydroorotate dehydrogenase NLG07_08915 PF05088 Bacterial NAD-glutamate dehydrogenase NLG07_08925 PF14870 Photosynthesis system II assembly factor YCF48 NLG07_08930 PF07044 Protein of unknown function (DUF1329) NLG07_08940 PF11940 Domain of unknown function (DUF3458) Ig-like fold NLG07_08940 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NLG07_08940 PF01433 Peptidase family M1 domain NLG07_08945 PF03553 Na+/H+ antiporter family NLG07_08950 PF00209 Sodium:neurotransmitter symporter family NLG07_08955 PF11818 C-terminal domain of tail specific protease (DUF3340) NLG07_08955 PF00595 PDZ domain NLG07_08955 PF03572 Peptidase family S41 NLG07_08955 PF17804 Tail specific protease N-terminal domain NLG07_08960 PF04352 ProQ/FINO family NLG07_08960 PF17516 ProQ C-terminal domain NLG07_08970 PF13185 GAF domain NLG07_08975 PF07670 Nucleoside recognition NLG07_08980 PF00266 Aminotransferase class-V NLG07_08995 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NLG07_09000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NLG07_09000 PF00364 Biotin-requiring enzyme NLG07_09000 PF02817 e3 binding domain NLG07_09005 PF02779 Transketolase, pyrimidine binding domain NLG07_09005 PF02780 Transketolase, C-terminal domain NLG07_09010 PF00676 Dehydrogenase E1 component NLG07_09015 PF01554 MatE NLG07_09025 PF01259 SAICAR synthetase NLG07_09030 PF06804 NlpB/DapX lipoprotein NLG07_09035 PF00701 Dihydrodipicolinate synthetase family NLG07_09040 PF00578 AhpC/TSA family NLG07_09045 PF01594 AI-2E family transporter NLG07_09050 PF01435 Peptidase family M48 NLG07_09060 PF03960 ArsC family NLG07_09065 PF03358 NADPH-dependent FMN reductase NLG07_09080 PF00308 Bacterial dnaA protein NLG07_09090 PF00586 AIR synthase related protein, N-terminal domain NLG07_09090 PF02769 AIR synthase related protein, C-terminal domain NLG07_09095 PF00551 Formyl transferase NLG07_09105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NLG07_09105 PF09317 Domain of unknown function (DUF1974) NLG07_09105 PF02770 Acyl-CoA dehydrogenase, middle domain NLG07_09105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NLG07_09110 PF00072 Response regulator receiver domain NLG07_09110 PF00196 Bacterial regulatory proteins, luxR family NLG07_09115 PF13649 Methyltransferase domain NLG07_09120 PF08003 Protein of unknown function (DUF1698) NLG07_09140 PF00128 Alpha amylase, catalytic domain NLG07_09145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NLG07_09145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NLG07_09150 PF00255 Glutathione peroxidase NLG07_09155 PF13847 Methyltransferase domain NLG07_09160 PF01784 NIF3 (NGG1p interacting factor 3) NLG07_09170 PF01343 Peptidase family S49 NLG07_09170 PF08496 Peptidase family S49 N-terminal NLG07_09175 PF12262 Bacterial virulence factor lipase N-terminal NLG07_09180 PF00106 short chain dehydrogenase NLG07_09185 PF00749 tRNA synthetases class I (E and Q), catalytic domain NLG07_09185 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NLG07_09190 PF00356 Bacterial regulatory proteins, lacI family NLG07_09195 PF00128 Alpha amylase, catalytic domain NLG07_09195 PF01373 Glycosyl hydrolase family 14 NLG07_09195 PF03423 Carbohydrate binding domain (family 25) NLG07_09200 PF00128 Alpha amylase, catalytic domain NLG07_09200 PF09087 Cyclomaltodextrinase, N-terminal NLG07_09200 PF10438 Cyclo-malto-dextrinase C-terminal domain NLG07_09205 PF04820 Tryptophan halogenase NLG07_09210 PF00497 Bacterial extracellular solute-binding proteins, family 3 NLG07_09210 PF00512 His Kinase A (phospho-acceptor) domain NLG07_09210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_09215 PF00108 Thiolase, N-terminal domain NLG07_09215 PF02803 Thiolase, C-terminal domain NLG07_09220 PF13411 MerR HTH family regulatory protein NLG07_09225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NLG07_09225 PF02770 Acyl-CoA dehydrogenase, middle domain NLG07_09225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NLG07_09230 PF01039 Carboxyl transferase domain NLG07_09240 PF00364 Biotin-requiring enzyme NLG07_09240 PF18140 Propionyl-coenzyme A carboxylase BT domain NLG07_09240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NLG07_09240 PF00289 Biotin carboxylase, N-terminal domain NLG07_09240 PF02785 Biotin carboxylase C-terminal domain NLG07_09245 PF00682 HMGL-like NLG07_09250 PF00483 Nucleotidyl transferase NLG07_09280 PF00266 Aminotransferase class-V NLG07_09285 PF03372 Endonuclease/Exonuclease/phosphatase family NLG07_09300 PF02687 FtsX-like permease family NLG07_09300 PF12704 MacB-like periplasmic core domain NLG07_09305 PF02559 CarD-like/TRCF domain NLG07_09305 PF17757 UvrB interaction domain NLG07_09305 PF00270 DEAD/DEAH box helicase NLG07_09305 PF03461 TRCF domain NLG07_09305 PF00271 Helicase conserved C-terminal domain NLG07_09315 PF01923 Cobalamin adenosyltransferase NLG07_09320 PF00933 Glycosyl hydrolase family 3 N terminal domain NLG07_09325 PF01804 Penicillin amidase NLG07_09335 PF00216 Bacterial DNA-binding protein NLG07_09340 PF01588 Putative tRNA binding domain NLG07_09340 PF03483 B3/4 domain NLG07_09340 PF03484 tRNA synthetase B5 domain NLG07_09340 PF03147 Ferredoxin-fold anticodon binding domain NLG07_09340 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NLG07_09345 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NLG07_09345 PF01409 tRNA synthetases class II core domain (F) NLG07_09350 PF00453 Ribosomal protein L20 NLG07_09355 PF01632 Ribosomal protein L35 NLG07_09360 PF00707 Translation initiation factor IF-3, C-terminal domain NLG07_09360 PF05198 Translation initiation factor IF-3, N-terminal domain NLG07_09365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NLG07_09365 PF02824 TGS domain NLG07_09365 PF03129 Anticodon binding domain NLG07_09365 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NLG07_09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_09380 PF07730 Histidine kinase NLG07_09385 PF00196 Bacterial regulatory proteins, luxR family NLG07_09385 PF00072 Response regulator receiver domain NLG07_09405 PF03960 ArsC family NLG07_09410 PF01546 Peptidase family M20/M25/M40 NLG07_09410 PF07687 Peptidase dimerisation domain NLG07_09415 PF02557 D-alanyl-D-alanine carboxypeptidase NLG07_09430 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NLG07_09435 PF00343 Carbohydrate phosphorylase NLG07_09440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NLG07_09440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NLG07_09440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NLG07_09440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NLG07_09445 PF00679 Elongation factor G C-terminus NLG07_09445 PF14492 Elongation Factor G, domain II NLG07_09445 PF00009 Elongation factor Tu GTP binding domain NLG07_09445 PF03144 Elongation factor Tu domain 2 NLG07_09445 PF03764 Elongation factor G, domain IV NLG07_09450 PF18125 RlmM ferredoxin-like domain NLG07_09450 PF01728 FtsJ-like methyltransferase NLG07_09465 PF03466 LysR substrate binding domain NLG07_09465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NLG07_09470 PF00793 DAHP synthetase I family NLG07_09480 PF17827 PrmC N-terminal domain NLG07_09480 PF13847 Methyltransferase domain NLG07_09485 PF00472 RF-1 domain NLG07_09485 PF03462 PCRF domain NLG07_09490 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NLG07_09490 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NLG07_09490 PF01488 Shikimate / quinate 5-dehydrogenase NLG07_09495 PF03550 Outer membrane lipoprotein LolB NLG07_09500 PF00288 GHMP kinases N terminal domain NLG07_09500 PF08544 GHMP kinases C terminal NLG07_09510 PF14572 Phosphoribosyl synthetase-associated domain NLG07_09510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NLG07_09515 PF01386 Ribosomal L25p family NLG07_09515 PF14693 Ribosomal protein TL5, C-terminal domain NLG07_09520 PF01195 Peptidyl-tRNA hydrolase NLG07_09525 PF06071 Protein of unknown function (DUF933) NLG07_09525 PF01926 50S ribosome-binding GTPase NLG07_09550 PF01235 Sodium:alanine symporter family NLG07_09565 PF01494 FAD binding domain NLG07_09570 PF00919 Uncharacterized protein family UPF0004 NLG07_09570 PF01938 TRAM domain NLG07_09570 PF04055 Radical SAM superfamily NLG07_09575 PF02562 PhoH-like protein NLG07_09580 PF02130 Uncharacterized protein family UPF0054 NLG07_09585 PF03471 Transporter associated domain NLG07_09585 PF00571 CBS domain NLG07_09590 PF00795 Carbon-nitrogen hydrolase NLG07_09595 PF01979 Amidohydrolase family NLG07_09600 PF01740 STAS domain NLG07_09600 PF00916 Sulfate permease family NLG07_09605 PF01272 Transcription elongation factor, GreA/GreB, C-term NLG07_09605 PF03449 Transcription elongation factor, N-terminal NLG07_09610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NLG07_09610 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NLG07_09610 PF02142 MGS-like domain NLG07_09615 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NLG07_09615 PF00117 Glutamine amidotransferase class-I NLG07_09620 PF05173 Dihydrodipicolinate reductase, C-terminus NLG07_09620 PF01113 Dihydrodipicolinate reductase, N-terminus NLG07_09630 PF03703 Bacterial PH domain NLG07_09640 PF01322 Cytochrome C' NLG07_09645 PF00226 DnaJ domain NLG07_09645 PF01556 DnaJ C terminal domain NLG07_09645 PF00684 DnaJ central domain NLG07_09650 PF00012 Hsp70 protein NLG07_09655 PF01025 GrpE NLG07_09660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_09660 PF00512 His Kinase A (phospho-acceptor) domain NLG07_09660 PF00672 HAMP domain NLG07_09665 PF00072 Response regulator receiver domain NLG07_09665 PF00196 Bacterial regulatory proteins, luxR family NLG07_09670 PF00593 TonB dependent receptor NLG07_09670 PF07715 TonB-dependent Receptor Plug Domain NLG07_09680 PF00561 alpha/beta hydrolase fold NLG07_09695 PF01513 ATP-NAD kinase NLG07_09700 PF02463 RecF/RecN/SMC N terminal domain NLG07_09705 PF04355 SmpA / OmlA family NLG07_09715 PF00849 RNA pseudouridylate synthase NLG07_09715 PF01479 S4 domain NLG07_09720 PF04079 Segregation and condensation complex subunit ScpB NLG07_09725 PF02616 Segregation and condensation protein ScpA NLG07_09735 PF02811 PHP domain NLG07_09740 PF04715 Anthranilate synthase component I, N terminal region NLG07_09740 PF00425 chorismate binding enzyme NLG07_09745 PF00117 Glutamine amidotransferase class-I NLG07_09750 PF02885 Glycosyl transferase family, helical bundle domain NLG07_09750 PF00591 Glycosyl transferase family, a/b domain NLG07_09755 PF00218 Indole-3-glycerol phosphate synthase NLG07_09755 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NLG07_09760 PF00291 Pyridoxal-phosphate dependent enzyme NLG07_09765 PF00290 Tryptophan synthase alpha chain NLG07_09770 PF03795 YCII-related domain NLG07_09775 PF00675 Insulinase (Peptidase family M16) NLG07_09775 PF05193 Peptidase M16 inactive domain NLG07_09785 PF00072 Response regulator receiver domain NLG07_09785 PF00486 Transcriptional regulatory protein, C terminal NLG07_09790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_09795 PF01594 AI-2E family transporter NLG07_09800 PF02152 Dihydroneopterin aldolase NLG07_09805 PF01370 NAD dependent epimerase/dehydratase family NLG07_09805 PF08338 Domain of unknown function (DUF1731) NLG07_09830 PF00005 ABC transporter NLG07_09835 PF13472 GDSL-like Lipase/Acylhydrolase family NLG07_09840 PF01566 Natural resistance-associated macrophage protein NLG07_09855 PF01979 Amidohydrolase family NLG07_09860 PF00916 Sulfate permease family NLG07_09860 PF01740 STAS domain NLG07_09865 PF01207 Dihydrouridine synthase (Dus) NLG07_09870 PF00072 Response regulator receiver domain NLG07_09870 PF00486 Transcriptional regulatory protein, C terminal NLG07_09875 PF00512 His Kinase A (phospho-acceptor) domain NLG07_09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NLG07_09880 PF13473 Cupredoxin-like domain NLG07_09895 PF00578 AhpC/TSA family NLG07_09935 PF00749 tRNA synthetases class I (E and Q), catalytic domain NLG07_09950 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NLG07_09970 PF00245 Alkaline phosphatase NLG07_09975 PF00245 Alkaline phosphatase NLG07_09985 PF03061 Thioesterase superfamily NLG07_09990 PF00270 DEAD/DEAH box helicase NLG07_09990 PF00271 Helicase conserved C-terminal domain NLG07_09995 PF13538 UvrD-like helicase C-terminal domain NLG07_10000 PF00580 UvrD/REP helicase N-terminal domain NLG07_10000 PF12705 PD-(D/E)XK nuclease superfamily NLG07_10000 PF13361 UvrD-like helicase C-terminal domain NLG07_10005 PF17946 RecC C-terminal domain NLG07_10010 PF03971 Monomeric isocitrate dehydrogenase NLG07_10035 PF00348 Polyprenyl synthetase NLG07_10040 PF01036 Bacteriorhodopsin-like protein NLG07_10050 PF12706 Beta-lactamase superfamily domain NLG07_10050 PF17770 Ribonuclease J C-terminal domain NLG07_10050 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NLG07_10065 PF02574 Homocysteine S-methyltransferase NLG07_10065 PF02219 Methylenetetrahydrofolate reductase NLG07_10080 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA NLG07_10085 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system NLG07_10120 PF00550 Phosphopantetheine attachment site NLG07_10160 PF00589 Phage integrase family NLG07_10160 PF13495 Phage integrase, N-terminal SAM-like domain NLG07_10175 PF02543 Carbamoyltransferase N-terminus NLG07_10175 PF16861 Carbamoyltransferase C-terminus NLG07_10200 PF01266 FAD dependent oxidoreductase NLG07_10205 PF17967 Pullulanase N2 domain NLG07_10205 PF18494 Pullulanase Ins domain NLG07_10205 PF03714 Bacterial pullanase-associated domain NLG07_10205 PF11852 Domain of unknown function (DUF3372) NLG07_10205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NLG07_10220 PF00549 CoA-ligase NLG07_10220 PF02629 CoA binding domain NLG07_10225 PF00549 CoA-ligase NLG07_10225 PF08442 ATP-grasp domain NLG07_10230 PF02817 e3 binding domain NLG07_10230 PF00364 Biotin-requiring enzyme NLG07_10230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NLG07_10235 PF16078 2-oxoglutarate dehydrogenase N-terminus NLG07_10235 PF02779 Transketolase, pyrimidine binding domain NLG07_10235 PF16870 2-oxoglutarate dehydrogenase C-terminal NLG07_10235 PF00676 Dehydrogenase E1 component NLG07_10240 PF13085 2Fe-2S iron-sulfur cluster binding domain NLG07_10245 PF02910 Fumarate reductase flavoprotein C-term NLG07_10245 PF00890 FAD binding domain NLG07_10250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NLG07_10255 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NLG07_10260 PF00285 Citrate synthase, C-terminal domain NLG07_10270 PF00483 Nucleotidyl transferase NLG07_10270 PF01050 Mannose-6-phosphate isomerase NLG07_10275 PF05726 Pirin C-terminal cupin domain NLG07_10275 PF02678 Pirin NLG07_10280 PF00899 ThiF family NLG07_10305 PF00919 Uncharacterized protein family UPF0004 NLG07_10305 PF18693 TRAM domain NLG07_10305 PF04055 Radical SAM superfamily NLG07_10310 PF02348 Cytidylyltransferase NLG07_10315 PF03966 Trm112p-like protein NLG07_10320 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NLG07_10325 PF00005 ABC transporter NLG07_10325 PF00664 ABC transporter transmembrane region NLG07_10340 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NLG07_10340 PF03120 NAD-dependent DNA ligase OB-fold domain NLG07_10340 PF01653 NAD-dependent DNA ligase adenylation domain NLG07_10340 PF00533 BRCA1 C Terminus (BRCT) domain NLG07_10340 PF12826 Helix-hairpin-helix motif NLG07_10345 PF04354 ZipA, C-terminal FtsZ-binding domain NLG07_10350 PF02463 RecF/RecN/SMC N terminal domain NLG07_10350 PF06470 SMC proteins Flexible Hinge Domain NLG07_10365 PF13181 Tetratricopeptide repeat NLG07_10365 PF07719 Tetratricopeptide repeat NLG07_10370 PF00575 S1 RNA binding domain NLG07_10370 PF03725 3' exoribonuclease family, domain 2 NLG07_10370 PF01138 3' exoribonuclease family, domain 1 NLG07_10370 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NLG07_10370 PF00013 KH domain NLG07_10395 PF03840 Preprotein translocase SecG subunit NLG07_10400 PF00121 Triosephosphate isomerase NLG07_10405 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NLG07_10405 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NLG07_10405 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NLG07_10405 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NLG07_10410 PF00809 Pterin binding enzyme NLG07_10415 PF00004 ATPase family associated with various cellular activities (AAA) NLG07_10415 PF17862 AAA+ lid domain NLG07_10415 PF06480 FtsH Extracellular NLG07_10415 PF01434 Peptidase family M41 NLG07_10420 PF01728 FtsJ-like methyltransferase NLG07_10425 PF01985 CRS1 / YhbY (CRM) domain NLG07_10430 PF00106 short chain dehydrogenase NLG07_10440 PF05362 Lon protease (S16) C-terminal proteolytic domain NLG07_10440 PF13654 AAA domain NLG07_10445 PF00133 tRNA synthetases class I (I, L, M and V) NLG07_10445 PF08264 Anticodon-binding domain of tRNA NLG07_10445 PF13603 Leucyl-tRNA synthetase, Domain 2 NLG07_10450 PF04390 Lipopolysaccharide-assembly NLG07_10455 PF06144 DNA polymerase III, delta subunit NLG07_10455 PF14840 Processivity clamp loader gamma complex DNA pol III C-term NLG07_10460 PF01467 Cytidylyltransferase-like NLG07_10470 PF02590 Predicted SPOUT methyltransferase NLG07_10475 PF00905 Penicillin binding protein transpeptidase domain NLG07_10475 PF03717 Penicillin-binding Protein dimerisation domain NLG07_10480 PF01098 Cell cycle protein NLG07_10495 PF07943 Penicillin-binding protein 5, C-terminal domain NLG07_10495 PF00768 D-alanyl-D-alanine carboxypeptidase NLG07_10500 PF04359 Protein of unknown function (DUF493) NLG07_10505 PF03099 Biotin/lipoate A/B protein ligase family NLG07_10510 PF04055 Radical SAM superfamily NLG07_10510 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NLG07_10515 PF00710 Asparaginase, N-terminal NLG07_10515 PF17763 Glutaminase/Asparaginase C-terminal domain NLG07_10520 PF07023 Protein of unknown function (DUF1315) NLG07_10530 PF01235 Sodium:alanine symporter family NLG07_10535 PF00246 Zinc carboxypeptidase NLG07_10535 PF18027 Cytosolic carboxypeptidase N-terminal domain NLG07_10540 PF00578 AhpC/TSA family NLG07_10545 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NLG07_10545 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NLG07_10550 PF01641 SelR domain NLG07_10555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NLG07_10555 PF00128 Alpha amylase, catalytic domain NLG07_10560 PF00128 Alpha amylase, catalytic domain NLG07_10560 PF02806 Alpha amylase, C-terminal all-beta domain NLG07_10560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NLG07_10565 PF02446 4-alpha-glucanotransferase NLG07_10570 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NLG07_10570 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NLG07_10575 PF01263 Aldose 1-epimerase NLG07_10580 PF01081 KDPG and KHG aldolase NLG07_10585 PF02685 Glucokinase NLG07_10590 PF00920 Dehydratase family NLG07_10595 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NLG07_10600 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NLG07_10600 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NLG07_10605 PF01418 Helix-turn-helix domain, rpiR family NLG07_10605 PF01380 SIS domain NLG07_10610 PF02887 Pyruvate kinase, alpha/beta domain NLG07_10610 PF00224 Pyruvate kinase, barrel domain NLG07_10615 PF03435 Saccharopine dehydrogenase NADP binding domain NLG07_10620 PF00881 Nitroreductase family NLG07_10625 PF01343 Peptidase family S49 NLG07_10630 PF04217 Protein of unknown function, DUF412 NLG07_10635 PF07992 Pyridine nucleotide-disulphide oxidoreductase NLG07_10640 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NLG07_10645 PF04377 Arginine-tRNA-protein transferase, C terminus NLG07_10645 PF04376 Arginine-tRNA-protein transferase, N terminus NLG07_10650 PF01176 Translation initiation factor 1A / IF-1 NLG07_10655 PF00004 ATPase family associated with various cellular activities (AAA) NLG07_10655 PF07724 AAA domain (Cdc48 subfamily) NLG07_10655 PF17871 AAA lid domain NLG07_10655 PF02861 Clp amino terminal domain, pathogenicity island component NLG07_10655 PF10431 C-terminal, D2-small domain, of ClpB protein NLG07_10660 PF02617 ATP-dependent Clp protease adaptor protein ClpS NLG07_10665 PF00313 'Cold-shock' DNA-binding domain NLG07_10670 PF00849 RNA pseudouridylate synthase NLG07_10680 PF04356 Protein of unknown function (DUF489) NLG07_10685 PF00206 Lyase NLG07_10685 PF08328 Adenylosuccinate lyase C-terminal NLG07_10695 PF08007 Cupin superfamily protein NLG07_10705 PF13183 4Fe-4S dicluster domain NLG07_10705 PF01565 FAD binding domain NLG07_10705 PF02913 FAD linked oxidases, C-terminal domain NLG07_10710 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NLG07_10710 PF02896 PEP-utilising enzyme, TIM barrel domain NLG07_10710 PF00391 PEP-utilising enzyme, mobile domain NLG07_10715 PF03618 Kinase/pyrophosphorylase NLG07_10720 PF03658 RnfH family Ubiquitin NLG07_10725 PF03364 Polyketide cyclase / dehydrase and lipid transport NLG07_10730 PF01668 SmpB protein NLG07_10735 PF01053 Cys/Met metabolism PLP-dependent enzyme NLG07_10745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NLG07_10745 PF02843 Phosphoribosylglycinamide synthetase, C domain NLG07_10745 PF02844 Phosphoribosylglycinamide synthetase, N domain NLG07_10750 PF01168 Alanine racemase, N-terminal domain NLG07_10750 PF00842 Alanine racemase, C-terminal domain NLG07_10760 PF00312 Ribosomal protein S15 NLG07_10765 PF01509 TruB family pseudouridylate synthase (N terminal domain) NLG07_10765 PF16198 tRNA pseudouridylate synthase B C-terminal domain NLG07_10765 PF09157 Pseudouridine synthase II TruB, C-terminal NLG07_10770 PF02033 Ribosome-binding factor A NLG07_10775 PF03144 Elongation factor Tu domain 2 NLG07_10775 PF00009 Elongation factor Tu GTP binding domain NLG07_10775 PF08364 Bacterial translation initiation factor IF-2 associated region NLG07_10775 PF04760 Translation initiation factor IF-2, N-terminal region NLG07_10775 PF11987 Translation-initiation factor 2 NLG07_10780 PF13184 NusA-like KH domain NLG07_10780 PF00575 S1 RNA binding domain NLG07_10780 PF08529 NusA N-terminal domain NLG07_10785 PF17384 RimP C-terminal SH3 domain NLG07_10785 PF02576 RimP N-terminal domain NLG07_10795 PF01329 Pterin 4 alpha carbinolamine dehydratase NLG07_10800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NLG07_10800 PF03466 LysR substrate binding domain NLG07_10820 PF04055 Radical SAM superfamily NLG07_10820 PF06969 HemN C-terminal domain NLG07_10835 PF00501 AMP-binding enzyme NLG07_10855 PF00326 Prolyl oligopeptidase family NLG07_10855 PF07676 WD40-like Beta Propeller Repeat NLG07_10860 PF00108 Thiolase, N-terminal domain NLG07_10860 PF02803 Thiolase, C-terminal domain NLG07_10865 PF02789 Cytosol aminopeptidase family, N-terminal domain NLG07_10865 PF00883 Cytosol aminopeptidase family, catalytic domain NLG07_10870 PF08042 PqqA family NLG07_10875 PF12706 Beta-lactamase superfamily domain NLG07_10880 PF03070 TENA/THI-4/PQQC family NLG07_10885 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NLG07_10890 PF04055 Radical SAM superfamily NLG07_10890 PF13186 Iron-sulfur cluster-binding domain NLG07_10895 PF05193 Peptidase M16 inactive domain NLG07_10895 PF00675 Insulinase (Peptidase family M16) NLG07_10900 PF07690 Major Facilitator Superfamily NLG07_10915 PF03480 Bacterial extracellular solute-binding protein, family 7 NLG07_10920 PF08042 PqqA family NLG07_10930 PF02678 Pirin NLG07_10930 PF17954 Quercetinase C-terminal cupin domain NLG07_10935 PF01435 Peptidase family M48 NLG07_10940 PF00005 ABC transporter NLG07_10940 PF02687 FtsX-like permease family NLG07_10940 PF12704 MacB-like periplasmic core domain NLG07_10955 PF12704 MacB-like periplasmic core domain NLG07_10955 PF02687 FtsX-like permease family NLG07_10955 PF00005 ABC transporter NLG07_10965 PF00692 dUTPase NLG07_10970 PF01588 Putative tRNA binding domain NLG07_10970 PF09334 tRNA synthetases class I (M) NLG07_10970 PF08264 Anticodon-binding domain of tRNA NLG07_10975 PF08241 Methyltransferase domain NLG07_10980 PF00753 Metallo-beta-lactamase superfamily NLG07_10980 PF16123 Hydroxyacylglutathione hydrolase C-terminus NLG07_10985 PF01464 Transglycosylase SLT domain NLG07_10985 PF01476 LysM domain NLG07_10990 PF09190 DALR domain NLG07_10990 PF01406 tRNA synthetases class I (C) catalytic domain NLG07_10995 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NLG07_11000 PF00149 Calcineurin-like phosphoesterase NLG07_11005 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NLG07_11010 PF04893 Yip1 domain NLG07_11015 PF00156 Phosphoribosyl transferase domain NLG07_11020 PF02674 Colicin V production protein NLG07_11030 PF02875 Mur ligase family, glutamate ligase domain NLG07_11030 PF08245 Mur ligase middle domain NLG07_11035 PF17848 Acetyl-coA carboxylase zinc finger domain NLG07_11035 PF01039 Carboxyl transferase domain NLG07_11040 PF01416 tRNA pseudouridine synthase NLG07_11050 PF02774 Semialdehyde dehydrogenase, dimerisation domain NLG07_11050 PF01118 Semialdehyde dehydrogenase, NAD binding domain NLG07_11055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NLG07_11055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NLG07_11055 PF11890 Domain of unknown function (DUF3410) NLG07_11065 PF12697 Alpha/beta hydrolase family NLG07_11070 PF00596 Class II Aldolase and Adducin N-terminal domain NLG07_11075 PF00109 Beta-ketoacyl synthase, N-terminal domain NLG07_11075 PF02801 Beta-ketoacyl synthase, C-terminal domain NLG07_11080 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NLG07_11080 PF01266 FAD dependent oxidoreductase NLG07_11095 PF04315 Elongation factor P hydroxylase NLG07_11110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NLG07_11110 PF07992 Pyridine nucleotide-disulphide oxidoreductase NLG07_11115 PF00732 GMC oxidoreductase NLG07_11115 PF05199 GMC oxidoreductase NLG07_11120 PF00392 Bacterial regulatory proteins, gntR family NLG07_11120 PF07840 FadR C-terminal domain NLG07_11125 PF02600 Disulfide bond formation protein DsbB NLG07_11130 PF03692 Putative zinc- or iron-chelating domain NLG07_11135 PF05166 YcgL domain NLG07_11140 PF00570 HRDC domain NLG07_11140 PF01612 3'-5' exonuclease NLG07_11145 PF00892 EamA-like transporter family NLG07_11175 PF00814 Glycoprotease family NLG07_11180 PF06733 DEAD_2 NLG07_11180 PF13307 Helicase C-terminal domain NLG07_11205 PF03435 Saccharopine dehydrogenase NADP binding domain NLG07_11220 PF08029 HisG, C-terminal domain NLG07_11220 PF01634 ATP phosphoribosyltransferase NLG07_11225 PF00815 Histidinol dehydrogenase NLG07_11230 PF00155 Aminotransferase class I and II NLG07_11235 PF00475 Imidazoleglycerol-phosphate dehydratase NLG07_11240 PF00117 Glutamine amidotransferase class-I NLG07_11255 PF00977 Histidine biosynthesis protein NLG07_11260 PF03334 Na+/H+ antiporter subunit NLG07_11265 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NLG07_11270 PF01899 Na+/H+ ion antiporter subunit NLG07_11275 PF00361 Proton-conducting membrane transporter NLG07_11280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NLG07_11285 PF00361 Proton-conducting membrane transporter NLG07_11285 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NLG07_11285 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NLG07_11285 PF13244 Domain of unknown function (DUF4040) NLG07_11290 PF02445 Quinolinate synthetase A protein NLG07_11305 PF16331 TolA binding protein trimerisation NLG07_11305 PF13174 Tetratricopeptide repeat NLG07_11310 PF00691 OmpA family NLG07_11315 PF07676 WD40-like Beta Propeller Repeat NLG07_11315 PF04052 TolB amino-terminal domain NLG07_11325 PF02472 Biopolymer transport protein ExbD/TolR NLG07_11330 PF01618 MotA/TolQ/ExbB proton channel family NLG07_11335 PF03061 Thioesterase superfamily NLG07_11340 PF17864 RuvB AAA lid domain NLG07_11340 PF05496 Holliday junction DNA helicase RuvB P-loop domain NLG07_11340 PF05491 RuvB C-terminal winged helix domain NLG07_11345 PF07499 RuvA, C-terminal domain NLG07_11345 PF01330 RuvA N terminal domain NLG07_11350 PF02075 Crossover junction endodeoxyribonuclease RuvC NLG07_11355 PF00293 NUDIX domain NLG07_11360 PF02938 GAD domain NLG07_11360 PF00152 tRNA synthetases class II (D, K and N) NLG07_11360 PF01336 OB-fold nucleic acid binding domain NLG07_11365 PF00005 ABC transporter NLG07_11365 PF08402 TOBE domain NLG07_11370 PF00528 Binding-protein-dependent transport system inner membrane component NLG07_11375 PF13416 Bacterial extracellular solute-binding protein NLG07_11380 PF01253 Translation initiation factor SUI1 NLG07_11385 PF01817 Chorismate mutase type II NLG07_11385 PF00800 Prephenate dehydratase NLG07_11390 PF01817 Chorismate mutase type II NLG07_11390 PF02153 Prephenate dehydrogenase NLG07_11395 PF00793 DAHP synthetase I family NLG07_11400 PF02954 Bacterial regulatory protein, Fis family NLG07_11400 PF06490 Flagellar regulatory protein FleQ NLG07_11400 PF00158 Sigma-54 interaction domain NLG07_11410 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NLG07_11410 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NLG07_11410 PF02769 AIR synthase related protein, C-terminal domain NLG07_11415 PF00497 Bacterial extracellular solute-binding proteins, family 3 NLG07_11415 PF01464 Transglycosylase SLT domain NLG07_11425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NLG07_11430 PF00999 Sodium/hydrogen exchanger family NLG07_11430 PF02080 TrkA-C domain NLG07_11430 PF02254 TrkA-N domain NLG07_11435 PF11734 TilS substrate C-terminal domain NLG07_11435 PF01171 PP-loop family NLG07_11435 PF09179 TilS substrate binding domain NLG07_11440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NLG07_11445 PF01336 OB-fold nucleic acid binding domain NLG07_11445 PF02811 PHP domain NLG07_11445 PF14579 Helix-hairpin-helix motif NLG07_11445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NLG07_11445 PF07733 Bacterial DNA polymerase III alpha NTPase domain NLG07_11450 PF01351 Ribonuclease HII NLG07_11455 PF02684 Lipid-A-disaccharide synthetase NLG07_11460 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NLG07_11460 PF00132 Bacterial transferase hexapeptide (six repeats) NLG07_11465 PF07977 FabA-like domain NLG07_11475 PF01103 Surface antigen NLG07_11475 PF07244 Surface antigen variable number repeat NLG07_11480 PF17820 PDZ domain NLG07_11480 PF02163 Peptidase family M50 NLG07_11485 PF13288 DXP reductoisomerase C-terminal domain NLG07_11485 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NLG07_11485 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NLG07_11495 PF01255 Putative undecaprenyl diphosphate synthase NLG07_11500 PF01765 Ribosome recycling factor NLG07_11505 PF00696 Amino acid kinase family NLG07_11510 PF00889 Elongation factor TS NLG07_11515 PF00318 Ribosomal protein S2 NLG07_11520 PF00557 Metallopeptidase family M24 NLG07_11525 PF01966 HD domain NLG07_11525 PF08335 GlnD PII-uridylyltransferase NLG07_11525 PF01909 Nucleotidyltransferase domain NLG07_11530 PF00132 Bacterial transferase hexapeptide (six repeats) NLG07_11530 PF14602 Hexapeptide repeat of succinyl-transferase NLG07_11530 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NLG07_11535 PF00258 Flavodoxin NLG07_11540 PF00849 RNA pseudouridylate synthase NLG07_11570 PF07348 Syd protein (SUKH-2) NLG07_11575 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NLG07_11575 PF14489 QueF-like protein NLG07_11580 PF11892 Domain of unknown function (DUF3412) NLG07_11580 PF03641 Possible lysine decarboxylase NLG07_11580 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NLG07_11585 PF18324 Hypothetical protein TT1725 NLG07_11585 PF00180 Isocitrate/isopropylmalate dehydrogenase NLG07_11595 PF00483 Nucleotidyl transferase NLG07_11600 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NLG07_11600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NLG07_11600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NLG07_11605 PF00854 POT family NLG07_11615 PF16363 GDP-mannose 4,6 dehydratase NLG07_11620 PF04333 MlaA lipoprotein NLG07_11630 PF03918 Cytochrome C biogenesis protein NLG07_11635 PF08534 Redoxin NLG07_11640 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NLG07_11640 PF01578 Cytochrome C assembly protein NLG07_11645 PF03100 CcmE NLG07_11650 PF04995 Heme exporter protein D (CcmD) NLG07_11655 PF01578 Cytochrome C assembly protein NLG07_11660 PF03379 CcmB protein NLG07_11665 PF00005 ABC transporter NLG07_11670 PF00154 recA bacterial DNA recombination protein NLG07_11675 PF02464 Competence-damaged protein NLG07_11680 PF00488 MutS domain V NLG07_11680 PF01624 MutS domain I NLG07_11680 PF05188 MutS domain II NLG07_11680 PF05192 MutS domain III NLG07_11680 PF05190 MutS family domain IV NLG07_11685 PF06418 CTP synthase N-terminus NLG07_11685 PF00117 Glutamine amidotransferase class-I NLG07_11690 PF00113 Enolase, C-terminal TIM barrel domain NLG07_11690 PF03952 Enolase, N-terminal domain NLG07_11695 PF02810 SEC-C motif NLG07_11705 PF00682 HMGL-like NLG07_11705 PF08502 LeuA allosteric (dimerisation) domain NLG07_11710 PF00180 Isocitrate/isopropylmalate dehydrogenase NLG07_11715 PF00330 Aconitase family (aconitate hydratase) NLG07_11720 PF00694 Aconitase C-terminal domain NLG07_11730 PF06969 HemN C-terminal domain NLG07_11730 PF04055 Radical SAM superfamily NLG07_11735 PF01725 Ham1 family NLG07_11740 PF00271 Helicase conserved C-terminal domain NLG07_11740 PF00270 DEAD/DEAH box helicase NLG07_11750 PF13401 AAA domain NLG07_11750 PF01471 Putative peptidoglycan binding domain NLG07_11760 PF04172 LrgB-like family NLG07_11770 PF01070 FMN-dependent dehydrogenase NLG07_11820 PF03050 Transposase IS66 family NLG07_11820 PF13817 IS66 C-terminal element NLG07_11820 PF13007 Transposase C of IS166 homeodomain NLG07_11820 PF13005 zinc-finger binding domain of transposase IS66 NLG07_11825 PF05717 IS66 Orf2 like protein