locus-tag class description BM527_00005 PF00308 Bacterial dnaA protein BM527_00005 PF08299 Bacterial dnaA protein helix-turn-helix BM527_00005 PF11638 DnaA N-terminal domain BM527_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BM527_00010 PF02767 DNA polymerase III beta subunit, central domain BM527_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BM527_00015 PF02463 RecF/RecN/SMC N terminal domain BM527_00020 PF18053 DNA gyrase B subunit insert domain BM527_00020 PF00204 DNA gyrase B BM527_00020 PF00986 DNA gyrase B subunit, carboxyl terminus BM527_00020 PF01751 Toprim domain BM527_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_00040 PF02092 Glycyl-tRNA synthetase beta subunit BM527_00040 PF05746 DALR anticodon binding domain BM527_00045 PF02091 Glycyl-tRNA synthetase alpha subunit BM527_00050 PF03352 Methyladenine glycosylase BM527_00060 PF04220 Der GTPase activator (YihI) BM527_00070 PF00034 Cytochrome c BM527_00075 PF01926 50S ribosome-binding GTPase BM527_00080 PF01367 5'-3' exonuclease, C-terminal SAM fold BM527_00080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BM527_00080 PF00476 DNA polymerase family A BM527_00080 PF01612 3'-5' exonuclease BM527_00090 PF02386 Cation transport protein BM527_00095 PF02254 TrkA-N domain BM527_00095 PF02080 TrkA-C domain BM527_00100 PF01189 16S rRNA methyltransferase RsmB/F BM527_00100 PF01029 NusB family BM527_00105 PF02911 Formyl transferase, C-terminal domain BM527_00105 PF00551 Formyl transferase BM527_00110 PF01327 Polypeptide deformylase BM527_00120 PF17782 DprA winged helix domain BM527_00120 PF02481 DNA recombination-mediator protein A BM527_00125 PF04361 Protein of unknown function (DUF494) BM527_00135 PF01300 Telomere recombination BM527_00140 PF01218 Coproporphyrinogen III oxidase BM527_00145 PF03922 OmpW family BM527_00155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BM527_00155 PF01488 Shikimate / quinate 5-dehydrogenase BM527_00155 PF08501 Shikimate dehydrogenase substrate binding domain BM527_00160 PF00132 Bacterial transferase hexapeptide (six repeats) BM527_00210 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM527_00210 PF14579 Helix-hairpin-helix motif BM527_00210 PF02811 PHP domain BM527_00210 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM527_00210 PF01336 OB-fold nucleic acid binding domain BM527_00240 PF04389 Peptidase family M28 BM527_00240 PF02225 PA domain BM527_00250 PF00440 Bacterial regulatory proteins, tetR family BM527_00255 PF02441 Flavoprotein BM527_00255 PF04127 DNA / pantothenate metabolism flavoprotein BM527_00260 PF04002 RadC-like JAB domain BM527_00280 PF06082 Exopolysaccharide biosynthesis protein YbjH BM527_00290 PF00830 Ribosomal L28 family BM527_00295 PF00471 Ribosomal protein L33 BM527_00305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BM527_00305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BM527_00305 PF06827 Zinc finger found in FPG and IleRS BM527_00310 PF01467 Cytidylyltransferase-like BM527_00320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BM527_00335 PF03707 Bacterial signalling protein N terminal repeat BM527_00335 PF00990 Diguanylate cyclase, GGDEF domain BM527_00335 PF00563 EAL domain BM527_00340 PF00155 Aminotransferase class I and II BM527_00345 PF08240 Alcohol dehydrogenase GroES-like domain BM527_00345 PF00107 Zinc-binding dehydrogenase BM527_00350 PF00581 Rhodanese-like domain BM527_00355 PF01694 Rhomboid family BM527_00355 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BM527_00365 PF04345 Chorismate lyase BM527_00370 PF01040 UbiA prenyltransferase family BM527_00375 PF04380 Membrane fusogenic activity BM527_00380 PF13361 UvrD-like helicase C-terminal domain BM527_00380 PF00580 UvrD/REP helicase N-terminal domain BM527_00385 PF00990 Diguanylate cyclase, GGDEF domain BM527_00385 PF03707 Bacterial signalling protein N terminal repeat BM527_00385 PF00563 EAL domain BM527_00390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BM527_00415 PF04143 Sulphur transport BM527_00420 PF02082 Transcriptional regulator BM527_00425 PF01925 Sulfite exporter TauE/SafE BM527_00430 PF00753 Metallo-beta-lactamase superfamily BM527_00440 PF00593 TonB dependent receptor BM527_00440 PF07715 TonB-dependent Receptor Plug Domain BM527_00450 PF00664 ABC transporter transmembrane region BM527_00450 PF00005 ABC transporter BM527_00455 PF00005 ABC transporter BM527_00455 PF00664 ABC transporter transmembrane region BM527_00465 PF01654 Cytochrome bd terminal oxidase subunit I BM527_00480 PF01206 Sulfurtransferase TusA BM527_00480 PF00581 Rhodanese-like domain BM527_00485 PF00753 Metallo-beta-lactamase superfamily BM527_00490 PF10417 C-terminal domain of 1-Cys peroxiredoxin BM527_00490 PF00578 AhpC/TSA family BM527_00500 PF00578 AhpC/TSA family BM527_00520 PF00873 AcrB/AcrD/AcrF family BM527_00560 PF13533 Biotin-lipoyl like BM527_00565 PF00005 ABC transporter BM527_00575 PF07715 TonB-dependent Receptor Plug Domain BM527_00575 PF00593 TonB dependent receptor BM527_00585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM527_00585 PF02770 Acyl-CoA dehydrogenase, middle domain BM527_00585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM527_00590 PF03466 LysR substrate binding domain BM527_00590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_00595 PF00753 Metallo-beta-lactamase superfamily BM527_00600 PF04317 YcjX-like family, DUF463 BM527_00615 PF04055 Radical SAM superfamily BM527_00615 PF06968 Biotin and Thiamin Synthesis associated domain BM527_00620 PF05690 Thiazole biosynthesis protein ThiG BM527_00630 PF00899 ThiF family BM527_00635 PF02581 Thiamine monophosphate synthase BM527_00640 PF13667 ThiC-associated domain BM527_00640 PF01964 Radical SAM ThiC family BM527_00645 PF07219 HemY protein N-terminus BM527_00645 PF07719 Tetratricopeptide repeat BM527_00650 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BM527_00660 PF03900 Porphobilinogen deaminase, C-terminal domain BM527_00660 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BM527_00665 PF00072 Response regulator receiver domain BM527_00665 PF00990 Diguanylate cyclase, GGDEF domain BM527_00675 PF00625 Guanylate kinase BM527_00680 PF01192 RNA polymerase Rpb6 BM527_00685 PF13291 ACT domain BM527_00685 PF04607 Region found in RelA / SpoT proteins BM527_00685 PF02824 TGS domain BM527_00690 PF01042 Endoribonuclease L-PSP BM527_00695 PF00588 SpoU rRNA Methylase family BM527_00695 PF12105 SpoU, rRNA methylase, C-terminal BM527_00700 PF17191 RecG wedge domain BM527_00700 PF00270 DEAD/DEAH box helicase BM527_00700 PF00271 Helicase conserved C-terminal domain BM527_00705 PF04445 Putative SAM-dependent methyltransferase BM527_00710 PF08534 Redoxin BM527_00725 PF00528 Binding-protein-dependent transport system inner membrane component BM527_00730 PF08402 TOBE domain BM527_00730 PF00005 ABC transporter BM527_00735 PF00924 Mechanosensitive ion channel BM527_00735 PF05552 Conserved TM helix BM527_00755 PF00563 EAL domain BM527_00755 PF04940 Sensors of blue-light using FAD BM527_00760 PF00990 Diguanylate cyclase, GGDEF domain BM527_00765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_00765 PF03466 LysR substrate binding domain BM527_00770 PF01810 LysE type translocator BM527_00775 PF00893 Small Multidrug Resistance protein BM527_00790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM527_00790 PF00529 HlyD membrane-fusion protein of T1SS BM527_00795 PF00873 AcrB/AcrD/AcrF family BM527_00805 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BM527_00805 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BM527_00810 PF00850 Histone deacetylase domain BM527_00830 PF11737 Protein of unknown function (DUF3300) BM527_00835 PF00925 GTP cyclohydrolase II BM527_00840 PF08448 PAS fold BM527_00840 PF00990 Diguanylate cyclase, GGDEF domain BM527_00840 PF00563 EAL domain BM527_00855 PF00270 DEAD/DEAH box helicase BM527_00855 PF09382 RQC domain BM527_00855 PF00570 HRDC domain BM527_00855 PF00271 Helicase conserved C-terminal domain BM527_00855 PF16124 RecQ zinc-binding BM527_00860 PF03061 Thioesterase superfamily BM527_00865 PF03448 MgtE intracellular N domain BM527_00865 PF01769 Divalent cation transporter BM527_00865 PF00571 CBS domain BM527_00870 PF00892 EamA-like transporter family BM527_00875 PF00990 Diguanylate cyclase, GGDEF domain BM527_00875 PF08448 PAS fold BM527_00880 PF00580 UvrD/REP helicase N-terminal domain BM527_00880 PF13361 UvrD-like helicase C-terminal domain BM527_00885 PF00132 Bacterial transferase hexapeptide (six repeats) BM527_00885 PF06426 Serine acetyltransferase, N-terminal BM527_00890 PF13419 Haloacid dehalogenase-like hydrolase BM527_00905 PF01678 Diaminopimelate epimerase BM527_00910 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BM527_00910 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BM527_00925 PF01569 PAP2 superfamily BM527_00930 PF03737 Aldolase/RraA BM527_00940 PF02441 Flavoprotein BM527_00945 PF08245 Mur ligase middle domain BM527_00945 PF01225 Mur ligase family, catalytic domain BM527_00945 PF02875 Mur ligase family, glutamate ligase domain BM527_00950 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BM527_00955 PF00719 Inorganic pyrophosphatase BM527_00980 PF17760 UvrA interaction domain BM527_00980 PF17755 UvrA DNA-binding domain BM527_00980 PF00005 ABC transporter BM527_00985 PF07690 Major Facilitator Superfamily BM527_00990 PF13419 Haloacid dehalogenase-like hydrolase BM527_01005 PF00356 Bacterial regulatory proteins, lacI family BM527_01010 PF01263 Aldose 1-epimerase BM527_01015 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BM527_01015 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BM527_01020 PF08544 GHMP kinases C terminal BM527_01020 PF10509 Galactokinase galactose-binding signature BM527_01020 PF00288 GHMP kinases N terminal domain BM527_01025 PF00474 Sodium:solute symporter family BM527_01030 PF00436 Single-strand binding protein family BM527_01110 PF02796 Helix-turn-helix domain of resolvase BM527_01110 PF00239 Resolvase, N terminal domain BM527_01115 PF12161 HsdM N-terminal domain BM527_01115 PF02384 N-6 DNA Methylase BM527_01120 PF01420 Type I restriction modification DNA specificity domain BM527_01125 PF04851 Type III restriction enzyme, res subunit BM527_01125 PF08463 EcoEI R protein C-terminal BM527_01125 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BM527_01125 PF00271 Helicase conserved C-terminal domain BM527_01150 PF16363 GDP-mannose 4,6 dehydratase BM527_01155 PF02837 Glycosyl hydrolases family 2, sugar binding domain BM527_01155 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BM527_01155 PF00703 Glycosyl hydrolases family 2 BM527_01155 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BM527_01155 PF16355 Domain of unknown function (DUF4982) BM527_01165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BM527_01165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BM527_01170 PF00455 DeoR C terminal sensor domain BM527_01170 PF08220 DeoR-like helix-turn-helix domain BM527_01175 PF01266 FAD dependent oxidoreductase BM527_01175 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BM527_01210 PF03958 Bacterial type II/III secretion system short domain BM527_01210 PF00263 Bacterial type II and III secretion system protein BM527_01225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BM527_01225 PF00437 Type II/IV secretion system protein BM527_01230 PF00482 Type II secretion system (T2SS), protein F BM527_01240 PF07963 Prokaryotic N-terminal methylation motif BM527_01240 PF00114 Pilin (bacterial filament) BM527_01245 PF08334 Type II secretion system (T2SS), protein G BM527_01245 PF07963 Prokaryotic N-terminal methylation motif BM527_01250 PF00114 Pilin (bacterial filament) BM527_01250 PF07963 Prokaryotic N-terminal methylation motif BM527_01280 PF04085 rod shape-determining protein MreC BM527_01285 PF04093 rod shape-determining protein MreD BM527_01290 PF02545 Maf-like protein BM527_01295 PF00575 S1 RNA binding domain BM527_01295 PF10150 Ribonuclease E/G family BM527_01305 PF00795 Carbon-nitrogen hydrolase BM527_01310 PF01523 Putative modulator of DNA gyrase BM527_01315 PF04751 Protein of unknown function (DUF615) BM527_01320 PF01523 Putative modulator of DNA gyrase BM527_01330 PF02837 Glycosyl hydrolases family 2, sugar binding domain BM527_01330 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BM527_01330 PF00703 Glycosyl hydrolases family 2 BM527_01330 PF02929 Beta galactosidase small chain BM527_01330 PF16353 Domain of unknown function(DUF4981) BM527_01335 PF00486 Transcriptional regulatory protein, C terminal BM527_01335 PF00072 Response regulator receiver domain BM527_01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_01340 PF00512 His Kinase A (phospho-acceptor) domain BM527_01340 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM527_01345 PF00534 Glycosyl transferases group 1 BM527_01345 PF08323 Starch synthase catalytic domain BM527_01350 PF08468 Methyltransferase small domain N-terminal BM527_01350 PF05175 Methyltransferase small domain BM527_01355 PF02390 Putative methyltransferase BM527_01365 PF14815 NUDIX domain BM527_01365 PF10576 Iron-sulfur binding domain of endonuclease III BM527_01365 PF00633 Helix-hairpin-helix motif BM527_01365 PF00730 HhH-GPD superfamily base excision DNA repair protein BM527_01370 PF04362 Bacterial Fe(2+) trafficking BM527_01385 PF17200 Single Cache domain 2 BM527_01385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_01385 PF00672 HAMP domain BM527_01390 PF00072 Response regulator receiver domain BM527_01395 PF01627 Hpt domain BM527_01395 PF02895 Signal transducing histidine kinase, homodimeric domain BM527_01395 PF01584 CheW-like domain BM527_01395 PF09078 CheY binding BM527_01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_01400 PF01584 CheW-like domain BM527_01405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_01405 PF08447 PAS fold BM527_01405 PF13426 PAS domain BM527_01410 PF03705 CheR methyltransferase, all-alpha domain BM527_01410 PF01739 CheR methyltransferase, SAM binding domain BM527_01415 PF03975 CheD chemotactic sensory transduction BM527_01420 PF01339 CheB methylesterase BM527_01420 PF00072 Response regulator receiver domain BM527_01425 PF00672 HAMP domain BM527_01425 PF17200 Single Cache domain 2 BM527_01425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_01430 PF00072 Response regulator receiver domain BM527_01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_01435 PF02895 Signal transducing histidine kinase, homodimeric domain BM527_01435 PF01627 Hpt domain BM527_01435 PF09078 CheY binding BM527_01435 PF01584 CheW-like domain BM527_01440 PF01584 CheW-like domain BM527_01445 PF08447 PAS fold BM527_01445 PF13426 PAS domain BM527_01445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_01450 PF08447 PAS fold BM527_01450 PF13426 PAS domain BM527_01450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_01455 PF03705 CheR methyltransferase, all-alpha domain BM527_01455 PF01739 CheR methyltransferase, SAM binding domain BM527_01460 PF03975 CheD chemotactic sensory transduction BM527_01465 PF00072 Response regulator receiver domain BM527_01465 PF01339 CheB methylesterase BM527_01475 PF13419 Haloacid dehalogenase-like hydrolase BM527_01490 PF13419 Haloacid dehalogenase-like hydrolase BM527_01495 PF00512 His Kinase A (phospho-acceptor) domain BM527_01495 PF00989 PAS fold BM527_01495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_01495 PF16736 Single Cache-like BM527_01510 PF00356 Bacterial regulatory proteins, lacI family BM527_01515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BM527_01515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BM527_01525 PF03825 Nucleoside H+ symporter BM527_01530 PF01261 Xylose isomerase-like TIM barrel BM527_01535 PF00732 GMC oxidoreductase BM527_01535 PF05199 GMC oxidoreductase BM527_01550 PF00465 Iron-containing alcohol dehydrogenase BM527_01585 PF01063 Amino-transferase class IV BM527_01590 PF00300 Histidine phosphatase superfamily (branch 1) BM527_01600 PF00694 Aconitase C-terminal domain BM527_01600 PF00330 Aconitase family (aconitate hydratase) BM527_01610 PF00437 Type II/IV secretion system protein BM527_01615 PF00338 Ribosomal protein S10p/S20e BM527_01620 PF00297 Ribosomal protein L3 BM527_01625 PF00573 Ribosomal protein L4/L1 family BM527_01630 PF00276 Ribosomal protein L23 BM527_01635 PF00181 Ribosomal Proteins L2, RNA binding domain BM527_01635 PF03947 Ribosomal Proteins L2, C-terminal domain BM527_01640 PF00203 Ribosomal protein S19 BM527_01645 PF00237 Ribosomal protein L22p/L17e BM527_01650 PF00189 Ribosomal protein S3, C-terminal domain BM527_01650 PF07650 KH domain BM527_01655 PF00252 Ribosomal protein L16p/L10e BM527_01660 PF00831 Ribosomal L29 protein BM527_01665 PF00366 Ribosomal protein S17 BM527_01670 PF00534 Glycosyl transferases group 1 BM527_01670 PF13439 Glycosyltransferase Family 4 BM527_01675 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BM527_01680 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BM527_01700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_01700 PF02743 Cache domain BM527_01700 PF00672 HAMP domain BM527_01705 PF01432 Peptidase family M3 BM527_01720 PF01842 ACT domain BM527_01720 PF00551 Formyl transferase BM527_01730 PF00271 Helicase conserved C-terminal domain BM527_01730 PF08482 ATP-dependent helicase C-terminal BM527_01730 PF00270 DEAD/DEAH box helicase BM527_01730 PF04408 Helicase associated domain (HA2) BM527_01740 PF13406 Transglycosylase SLT domain BM527_01745 PF00905 Penicillin binding protein transpeptidase domain BM527_01745 PF00912 Transglycosylase BM527_01745 PF14814 Bifunctional transglycosylase second domain BM527_01755 PF05661 Protein of unknown function (DUF808) BM527_01765 PF00543 Nitrogen regulatory protein P-II BM527_01770 PF00909 Ammonium Transporter Family BM527_01780 PF04261 Dyp-type peroxidase family BM527_01785 PF00672 HAMP domain BM527_01785 PF00211 Adenylate and Guanylate cyclase catalytic domain BM527_01790 PF00202 Aminotransferase class-III BM527_01795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BM527_01795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BM527_01810 PF00873 AcrB/AcrD/AcrF family BM527_01820 PF01627 Hpt domain BM527_01820 PF00512 His Kinase A (phospho-acceptor) domain BM527_01820 PF00072 Response regulator receiver domain BM527_01820 PF00672 HAMP domain BM527_01820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM527_01820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_01825 PF00521 DNA gyrase/topoisomerase IV, subunit A BM527_01825 PF03989 DNA gyrase C-terminal domain, beta-propeller BM527_01835 PF08447 PAS fold BM527_01835 PF00563 EAL domain BM527_01835 PF00990 Diguanylate cyclase, GGDEF domain BM527_01835 PF08448 PAS fold BM527_01845 PF00171 Aldehyde dehydrogenase family BM527_01850 PF04958 Arginine N-succinyltransferase beta subunit BM527_01855 PF00202 Aminotransferase class-III BM527_01865 PF00117 Glutamine amidotransferase class-I BM527_01870 PF00579 tRNA synthetases class I (W and Y) BM527_01875 PF00834 Ribulose-phosphate 3 epimerase family BM527_01895 PF02086 D12 class N6 adenine-specific DNA methyltransferase BM527_01905 PF01761 3-dehydroquinate synthase BM527_01910 PF01202 Shikimate kinase BM527_01915 PF00263 Bacterial type II and III secretion system protein BM527_01915 PF03958 Bacterial type II/III secretion system short domain BM527_01915 PF11741 AMIN domain BM527_01915 PF07660 Secretin and TonB N terminus short domain BM527_01940 PF17092 Penicillin-binding protein OB-like domain BM527_01940 PF00905 Penicillin binding protein transpeptidase domain BM527_01940 PF00912 Transglycosylase BM527_01945 PF00390 Malic enzyme, N-terminal domain BM527_01945 PF03949 Malic enzyme, NAD binding domain BM527_01955 PF02798 Glutathione S-transferase, N-terminal domain BM527_01965 PF00440 Bacterial regulatory proteins, tetR family BM527_01975 PF00583 Acetyltransferase (GNAT) family BM527_01975 PF00696 Amino acid kinase family BM527_01980 PF14698 Argininosuccinate lyase C-terminal BM527_01980 PF00206 Lyase BM527_01985 PF00764 Arginosuccinate synthase BM527_01990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BM527_01990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BM527_01995 PF00696 Amino acid kinase family BM527_02000 PF01118 Semialdehyde dehydrogenase, NAD binding domain BM527_02000 PF02774 Semialdehyde dehydrogenase, dimerisation domain BM527_02005 PF02142 MGS-like domain BM527_02015 PF00072 Response regulator receiver domain BM527_02015 PF00486 Transcriptional regulatory protein, C terminal BM527_02020 PF16527 Two-component sensor protein CpxA, periplasmic domain BM527_02020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_02020 PF00672 HAMP domain BM527_02020 PF00512 His Kinase A (phospho-acceptor) domain BM527_02025 PF12146 Serine aminopeptidase, S33 BM527_02030 PF00588 SpoU rRNA Methylase family BM527_02040 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BM527_02040 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BM527_02045 PF02556 Preprotein translocase subunit SecB BM527_02050 PF00462 Glutaredoxin BM527_02055 PF00581 Rhodanese-like domain BM527_02060 PF01551 Peptidase family M23 BM527_02065 PF04748 Divergent polysaccharide deacetylase BM527_02085 PF02666 Phosphatidylserine decarboxylase BM527_02090 PF03193 RsgA GTPase BM527_02095 PF00929 Exonuclease BM527_02105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BM527_02105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BM527_02105 PF00205 Thiamine pyrophosphate enzyme, central domain BM527_02110 PF10369 Small subunit of acetolactate synthase BM527_02115 PF01979 Amidohydrolase family BM527_02120 PF03606 C4-dicarboxylate anaerobic carrier BM527_02125 PF00593 TonB dependent receptor BM527_02125 PF07715 TonB-dependent Receptor Plug Domain BM527_02130 PF03575 Peptidase family S51 BM527_02140 PF02416 mttA/Hcf106 family BM527_02145 PF02416 mttA/Hcf106 family BM527_02150 PF00902 Sec-independent protein translocase protein (TatC) BM527_02160 PF01026 TatD related DNase BM527_02165 PF00360 Phytochrome region BM527_02165 PF00990 Diguanylate cyclase, GGDEF domain BM527_02165 PF01590 GAF domain BM527_02165 PF00563 EAL domain BM527_02170 PF00490 Delta-aminolevulinic acid dehydratase BM527_02175 PF02541 Ppx/GppA phosphatase family BM527_02180 PF00270 DEAD/DEAH box helicase BM527_02180 PF00271 Helicase conserved C-terminal domain BM527_02185 PF00085 Thioredoxin BM527_02190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM527_02190 PF07497 Rho termination factor, RNA-binding domain BM527_02190 PF07498 Rho termination factor, N-terminal domain BM527_02200 PF00512 His Kinase A (phospho-acceptor) domain BM527_02200 PF09308 LuxQ, periplasmic BM527_02200 PF00072 Response regulator receiver domain BM527_02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_02205 PF06965 Na+/H+ antiporter 1 BM527_02210 PF00731 AIR carboxylase BM527_02215 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BM527_02215 PF02222 ATP-grasp domain BM527_02225 PF02743 Cache domain BM527_02225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_02225 PF00672 HAMP domain BM527_02230 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BM527_02230 PF01565 FAD binding domain BM527_02235 PF08279 HTH domain BM527_02235 PF03099 Biotin/lipoate A/B protein ligase family BM527_02235 PF02237 Biotin protein ligase C terminal domain BM527_02240 PF03309 Type III pantothenate kinase BM527_02255 PF00210 Ferritin-like domain BM527_02260 PF07995 Glucose / Sorbosone dehydrogenase BM527_02265 PF00326 Prolyl oligopeptidase family BM527_02265 PF07676 WD40-like Beta Propeller Repeat BM527_02275 PF00085 Thioredoxin BM527_02290 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BM527_02295 PF00709 Adenylosuccinate synthetase BM527_02300 PF00171 Aldehyde dehydrogenase family BM527_02325 PF03553 Na+/H+ antiporter family BM527_02330 PF00933 Glycosyl hydrolase family 3 N terminal domain BM527_02340 PF07075 Protein of unknown function (DUF1343) BM527_02345 PF01380 SIS domain BM527_02350 PF01168 Alanine racemase, N-terminal domain BM527_02350 PF00842 Alanine racemase, C-terminal domain BM527_02365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM527_02390 PF08274 PhnA Zinc-Ribbon BM527_02390 PF03831 PhnA domain BM527_02395 PF00583 Acetyltransferase (GNAT) family BM527_02410 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BM527_02420 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BM527_02425 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BM527_02435 PF01381 Helix-turn-helix BM527_02455 PF00589 Phage integrase family BM527_02455 PF13495 Phage integrase, N-terminal SAM-like domain BM527_02460 PF02803 Thiolase, C-terminal domain BM527_02460 PF00108 Thiolase, N-terminal domain BM527_02465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BM527_02465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BM527_02465 PF00378 Enoyl-CoA hydratase/isomerase BM527_02470 PF01464 Transglycosylase SLT domain BM527_02470 PF14718 Soluble lytic murein transglycosylase L domain BM527_02475 PF00557 Metallopeptidase family M24 BM527_02485 PF00348 Polyprenyl synthetase BM527_02490 PF00829 Ribosomal prokaryotic L21 protein BM527_02495 PF01016 Ribosomal L27 protein BM527_02500 PF01926 50S ribosome-binding GTPase BM527_02500 PF01018 GTP1/OBG BM527_02505 PF00186 Dihydrofolate reductase BM527_02510 PF04539 Sigma-70 region 3 BM527_02510 PF04545 Sigma-70, region 4 BM527_02510 PF00140 Sigma-70 factor, region 1.2 BM527_02510 PF04542 Sigma-70 region 2 BM527_02515 PF01551 Peptidase family M23 BM527_02515 PF01476 LysM domain BM527_02520 PF09335 SNARE associated Golgi protein BM527_02530 PF01142 tRNA pseudouridine synthase D (TruD) BM527_02535 PF02542 YgbB family BM527_02540 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BM527_02545 PF04977 Septum formation initiator BM527_02555 PF00672 HAMP domain BM527_02555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_02555 PF17200 Single Cache domain 2 BM527_02560 PF01619 Proline dehydrogenase BM527_02560 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BM527_02560 PF14850 DNA-binding domain of Proline dehydrogenase BM527_02560 PF00171 Aldehyde dehydrogenase family BM527_02570 PF01928 CYTH domain BM527_02580 PF02976 DNA mismatch repair enzyme MutH BM527_02585 PF00293 NUDIX domain BM527_02590 PF01590 GAF domain BM527_02590 PF05524 PEP-utilising enzyme, N-terminal BM527_02590 PF02896 PEP-utilising enzyme, TIM barrel domain BM527_02590 PF00391 PEP-utilising enzyme, mobile domain BM527_02595 PF01925 Sulfite exporter TauE/SafE BM527_02600 PF01790 Prolipoprotein diacylglyceryl transferase BM527_02605 PF00303 Thymidylate synthase BM527_02610 PF01339 CheB methylesterase BM527_02610 PF00072 Response regulator receiver domain BM527_02615 PF00072 Response regulator receiver domain BM527_02615 PF00990 Diguanylate cyclase, GGDEF domain BM527_02620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_02620 PF00672 HAMP domain BM527_02620 PF00512 His Kinase A (phospho-acceptor) domain BM527_02620 PF01627 Hpt domain BM527_02620 PF00072 Response regulator receiver domain BM527_02620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM527_02625 PF07690 Major Facilitator Superfamily BM527_02640 PF00849 RNA pseudouridylate synthase BM527_02645 PF00271 Helicase conserved C-terminal domain BM527_02645 PF12137 RNA polymerase recycling family C-terminal BM527_02645 PF00176 SNF2 family N-terminal domain BM527_02645 PF18339 RapA N-terminal Tudor like domain 1 BM527_02645 PF18337 RapA N-terminal Tudor like domain BM527_02650 PF02562 PhoH-like protein BM527_02650 PF13638 PIN domain BM527_02660 PF10414 Sirohaem synthase dimerisation region BM527_02660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BM527_02665 PF00271 Helicase conserved C-terminal domain BM527_02665 PF00270 DEAD/DEAH box helicase BM527_02665 PF03880 DbpA RNA binding domain BM527_02680 PF02321 Outer membrane efflux protein BM527_02685 PF00293 NUDIX domain BM527_02695 PF00149 Calcineurin-like phosphoesterase BM527_02700 PF05728 Uncharacterised protein family (UPF0227) BM527_02705 PF00204 DNA gyrase B BM527_02705 PF01751 Toprim domain BM527_02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_02705 PF00986 DNA gyrase B subunit, carboxyl terminus BM527_02715 PF13419 Haloacid dehalogenase-like hydrolase BM527_02735 PF04055 Radical SAM superfamily BM527_02745 PF00152 tRNA synthetases class II (D, K and N) BM527_02750 PF07715 TonB-dependent Receptor Plug Domain BM527_02750 PF00593 TonB dependent receptor BM527_02765 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BM527_02770 PF05175 Methyltransferase small domain BM527_02780 PF01722 BolA-like protein BM527_02785 PF01569 PAP2 superfamily BM527_02795 PF03466 LysR substrate binding domain BM527_02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_02800 PF01300 Telomere recombination BM527_02800 PF03481 Putative GTP-binding controlling metal-binding BM527_02805 PF00361 Proton-conducting membrane transporter BM527_02805 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BM527_02810 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BM527_02820 PF01740 STAS domain BM527_02820 PF00916 Sulfate permease family BM527_02825 PF02885 Glycosyl transferase family, helical bundle domain BM527_02825 PF00591 Glycosyl transferase family, a/b domain BM527_02830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_02830 PF13426 PAS domain BM527_02830 PF08447 PAS fold BM527_02840 PF01323 DSBA-like thioredoxin domain BM527_02845 PF00593 TonB dependent receptor BM527_02845 PF07715 TonB-dependent Receptor Plug Domain BM527_02850 PF01636 Phosphotransferase enzyme family BM527_02855 PF13746 4Fe-4S dicluster domain BM527_02855 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BM527_02855 PF12801 4Fe-4S binding domain BM527_02870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM527_02870 PF12806 Acetyl-CoA dehydrogenase C-terminal like BM527_02870 PF02770 Acyl-CoA dehydrogenase, middle domain BM527_02870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM527_02885 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BM527_02885 PF13378 Enolase C-terminal domain-like BM527_02890 PF00596 Class II Aldolase and Adducin N-terminal domain BM527_02900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM527_02905 PF00873 AcrB/AcrD/AcrF family BM527_02920 PF00672 HAMP domain BM527_02920 PF02743 Cache domain BM527_02920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_02925 PF04539 Sigma-70 region 3 BM527_02925 PF00140 Sigma-70 factor, region 1.2 BM527_02925 PF03979 Sigma-70 factor, region 1.1 BM527_02925 PF04546 Sigma-70, non-essential region BM527_02925 PF04545 Sigma-70, region 4 BM527_02925 PF04542 Sigma-70 region 2 BM527_02930 PF08278 DNA primase DnaG DnaB-binding BM527_02930 PF08275 DNA primase catalytic core, N-terminal domain BM527_02930 PF01807 CHC2 zinc finger BM527_02930 PF10410 DnaB-helicase binding domain of primase BM527_02940 PF01165 Ribosomal protein S21 BM527_02945 PF00814 Glycoprotease family BM527_02955 PF02660 Glycerol-3-phosphate acyltransferase BM527_02960 PF02152 Dihydroneopterin aldolase BM527_02970 PF02673 Bacitracin resistance protein BacA BM527_02975 PF01230 HIT domain BM527_02990 PF03594 Benzoate membrane transport protein BM527_02995 PF01381 Helix-turn-helix BM527_02995 PF07883 Cupin domain BM527_03000 PF04381 Putative exonuclease, RdgC BM527_03005 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM527_03005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_03005 PF00512 His Kinase A (phospho-acceptor) domain BM527_03010 PF00486 Transcriptional regulatory protein, C terminal BM527_03010 PF00072 Response regulator receiver domain BM527_03015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_03015 PF00989 PAS fold BM527_03015 PF11808 Phosphate regulon sensor protein PhoR BM527_03015 PF00512 His Kinase A (phospho-acceptor) domain BM527_03020 PF12849 PBP superfamily domain BM527_03040 PF01618 MotA/TolQ/ExbB proton channel family BM527_03045 PF01618 MotA/TolQ/ExbB proton channel family BM527_03050 PF02472 Biopolymer transport protein ExbD/TolR BM527_03055 PF03544 Gram-negative bacterial TonB protein C-terminal BM527_03065 PF00072 Response regulator receiver domain BM527_03070 PF00672 HAMP domain BM527_03070 PF01627 Hpt domain BM527_03070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM527_03070 PF00072 Response regulator receiver domain BM527_03070 PF00512 His Kinase A (phospho-acceptor) domain BM527_03070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_03080 PF13193 AMP-binding enzyme C-terminal domain BM527_03080 PF00501 AMP-binding enzyme BM527_03095 PF07995 Glucose / Sorbosone dehydrogenase BM527_03100 PF00330 Aconitase family (aconitate hydratase) BM527_03100 PF06434 Aconitate hydratase 2 N-terminus BM527_03100 PF11791 Aconitate B N-terminal domain BM527_03110 PF01048 Phosphorylase superfamily BM527_03115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM527_03115 PF00512 His Kinase A (phospho-acceptor) domain BM527_03115 PF01627 Hpt domain BM527_03115 PF00672 HAMP domain BM527_03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_03115 PF00072 Response regulator receiver domain BM527_03135 PF06434 Aconitate hydratase 2 N-terminus BM527_03135 PF11791 Aconitate B N-terminal domain BM527_03135 PF00330 Aconitase family (aconitate hydratase) BM527_03145 PF00696 Amino acid kinase family BM527_03145 PF01842 ACT domain BM527_03155 PF00672 HAMP domain BM527_03155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_03160 PF00149 Calcineurin-like phosphoesterase BM527_03165 PF04379 ApaG domain BM527_03170 PF00398 Ribosomal RNA adenine dimethylase BM527_03175 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BM527_03180 PF09312 SurA N-terminal domain BM527_03180 PF00639 PPIC-type PPIASE domain BM527_03185 PF04453 LPS transport system D BM527_03185 PF03968 OstA-like protein BM527_03190 PF00226 DnaJ domain BM527_03190 PF05099 Tellurite resistance protein TerB BM527_03195 PF02899 Phage integrase, N-terminal SAM-like domain BM527_03195 PF00589 Phage integrase family BM527_03200 PF13098 Thioredoxin-like domain BM527_03200 PF10411 Disulfide bond isomerase protein N-terminus BM527_03205 PF17768 RecJ OB domain BM527_03205 PF02272 DHHA1 domain BM527_03205 PF01368 DHH family BM527_03215 PF02565 Recombination protein O C terminal BM527_03215 PF11967 Recombination protein O N terminal BM527_03220 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BM527_03225 PF01648 4'-phosphopantetheinyl transferase superfamily BM527_03230 PF05958 tRNA (Uracil-5-)-methyltransferase BM527_03235 PF02824 TGS domain BM527_03235 PF13291 ACT domain BM527_03235 PF04607 Region found in RelA / SpoT proteins BM527_03240 PF03819 MazG nucleotide pyrophosphohydrolase domain BM527_03250 PF07715 TonB-dependent Receptor Plug Domain BM527_03250 PF07660 Secretin and TonB N terminus short domain BM527_03250 PF00593 TonB dependent receptor BM527_03265 PF07715 TonB-dependent Receptor Plug Domain BM527_03265 PF00593 TonB dependent receptor BM527_03290 PF00501 AMP-binding enzyme BM527_03290 PF13193 AMP-binding enzyme C-terminal domain BM527_03300 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BM527_03310 PF00535 Glycosyl transferase family 2 BM527_03330 PF08521 Two-component sensor kinase N-terminal BM527_03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_03330 PF00512 His Kinase A (phospho-acceptor) domain BM527_03335 PF00486 Transcriptional regulatory protein, C terminal BM527_03335 PF00072 Response regulator receiver domain BM527_03345 PF00572 Ribosomal protein L13 BM527_03350 PF00380 Ribosomal protein S9/S16 BM527_03355 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BM527_03355 PF00355 Rieske [2Fe-2S] domain BM527_03360 PF00032 Cytochrome b(C-terminal)/b6/petD BM527_03360 PF00033 Cytochrome b/b6/petB BM527_03365 PF02167 Cytochrome C1 family BM527_03370 PF02798 Glutathione S-transferase, N-terminal domain BM527_03370 PF00043 Glutathione S-transferase, C-terminal domain BM527_03375 PF04386 Stringent starvation protein B BM527_03380 PF03448 MgtE intracellular N domain BM527_03380 PF01769 Divalent cation transporter BM527_03380 PF00571 CBS domain BM527_03385 PF00381 PTS HPr component phosphorylation site BM527_03390 PF03668 P-loop ATPase protein family BM527_03395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BM527_03400 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BM527_03405 PF04552 Sigma-54, DNA binding domain BM527_03405 PF04963 Sigma-54 factor, core binding domain BM527_03405 PF00309 Sigma-54 factor, Activator interacting domain (AID) BM527_03410 PF00005 ABC transporter BM527_03410 PF12399 Branched-chain amino acid ATP-binding cassette transporter BM527_03415 PF03968 OstA-like protein BM527_03430 PF00571 CBS domain BM527_03430 PF01380 SIS domain BM527_03435 PF01699 Sodium/calcium exchanger protein BM527_03440 PF00005 ABC transporter BM527_03445 PF02405 Permease MlaE BM527_03450 PF02470 MlaD protein BM527_03455 PF05494 MlaC protein BM527_03465 PF01722 BolA-like protein BM527_03470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BM527_03475 PF13180 PDZ domain BM527_03480 PF13180 PDZ domain BM527_03480 PF00595 PDZ domain BM527_03490 PF03969 AFG1-like ATPase BM527_03495 PF01709 Transcriptional regulator BM527_03540 PF00990 Diguanylate cyclase, GGDEF domain BM527_03540 PF13188 PAS domain BM527_03540 PF03707 Bacterial signalling protein N terminal repeat BM527_03540 PF00563 EAL domain BM527_03545 PF00881 Nitroreductase family BM527_03555 PF02355 Protein export membrane protein BM527_03555 PF07549 SecD/SecF GG Motif BM527_03560 PF02080 TrkA-C domain BM527_03560 PF03471 Transporter associated domain BM527_03560 PF00999 Sodium/hydrogen exchanger family BM527_03570 PF07715 TonB-dependent Receptor Plug Domain BM527_03570 PF00593 TonB dependent receptor BM527_03575 PF00892 EamA-like transporter family BM527_03580 PF00512 His Kinase A (phospho-acceptor) domain BM527_03580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_03580 PF00072 Response regulator receiver domain BM527_03580 PF09308 LuxQ, periplasmic BM527_03585 PF13458 Periplasmic binding protein BM527_03600 PF02772 S-adenosylmethionine synthetase, central domain BM527_03600 PF02773 S-adenosylmethionine synthetase, C-terminal domain BM527_03600 PF00438 S-adenosylmethionine synthetase, N-terminal domain BM527_03605 PF00456 Transketolase, thiamine diphosphate binding domain BM527_03605 PF02779 Transketolase, pyrimidine binding domain BM527_03605 PF02780 Transketolase, C-terminal domain BM527_03610 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BM527_03610 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM527_03615 PF00162 Phosphoglycerate kinase BM527_03620 PF00274 Fructose-bisphosphate aldolase class-I BM527_03625 PF01219 Prokaryotic diacylglycerol kinase BM527_03630 PF08019 Phosphoethanolamine transferase EptA/EptB BM527_03630 PF00884 Sulfatase BM527_03635 PF00486 Transcriptional regulatory protein, C terminal BM527_03635 PF00072 Response regulator receiver domain BM527_03640 PF00672 HAMP domain BM527_03640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_03640 PF00512 His Kinase A (phospho-acceptor) domain BM527_03650 PF00529 HlyD membrane-fusion protein of T1SS BM527_03650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM527_03655 PF00873 AcrB/AcrD/AcrF family BM527_03660 PF02321 Outer membrane efflux protein BM527_03665 PF00326 Prolyl oligopeptidase family BM527_03665 PF07676 WD40-like Beta Propeller Repeat BM527_03670 PF02541 Ppx/GppA phosphatase family BM527_03675 PF13090 Polyphosphate kinase C-terminal domain 2 BM527_03675 PF02503 Polyphosphate kinase middle domain BM527_03675 PF17941 Polyphosphate kinase C-terminal domain 1 BM527_03675 PF13089 Polyphosphate kinase N-terminal domain BM527_03685 PF00528 Binding-protein-dependent transport system inner membrane component BM527_03690 PF00528 Binding-protein-dependent transport system inner membrane component BM527_03695 PF00005 ABC transporter BM527_03700 PF01895 PhoU domain BM527_03705 PF01384 Phosphate transporter family BM527_03715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_03715 PF03466 LysR substrate binding domain BM527_03725 PF03006 Haemolysin-III related BM527_03730 PF01047 MarR family BM527_03735 PF02566 OsmC-like protein BM527_03740 PF01433 Peptidase family M1 domain BM527_03750 PF09186 Domain of unknown function (DUF1949) BM527_03750 PF01205 Uncharacterized protein family UPF0029 BM527_03765 PF13476 AAA domain BM527_03770 PF02435 Levansucrase/Invertase BM527_03780 PF00375 Sodium:dicarboxylate symporter family BM527_03785 PF00491 Arginase family BM527_03790 PF01979 Amidohydrolase family BM527_03795 PF00392 Bacterial regulatory proteins, gntR family BM527_03795 PF07702 UTRA domain BM527_03800 PF01175 Urocanase Rossmann-like domain BM527_03800 PF17392 Urocanase C-terminal domain BM527_03800 PF17391 Urocanase N-terminal domain BM527_03805 PF00221 Aromatic amino acid lyase BM527_03830 PF12848 ABC transporter BM527_03830 PF00005 ABC transporter BM527_03850 PF00158 Sigma-54 interaction domain BM527_03850 PF00072 Response regulator receiver domain BM527_03850 PF02954 Bacterial regulatory protein, Fis family BM527_03855 PF01627 Hpt domain BM527_03855 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM527_03855 PF00512 His Kinase A (phospho-acceptor) domain BM527_03855 PF00072 Response regulator receiver domain BM527_03855 PF00672 HAMP domain BM527_03855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_03880 PF00437 Type II/IV secretion system protein BM527_03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_03900 PF00072 Response regulator receiver domain BM527_03900 PF00512 His Kinase A (phospho-acceptor) domain BM527_03900 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM527_03910 PF00158 Sigma-54 interaction domain BM527_03910 PF00072 Response regulator receiver domain BM527_03910 PF02954 Bacterial regulatory protein, Fis family BM527_03935 PF00924 Mechanosensitive ion channel BM527_03945 PF07690 Major Facilitator Superfamily BM527_03980 PF03788 LrgA family BM527_03985 PF04172 LrgB-like family BM527_03990 PF00072 Response regulator receiver domain BM527_04015 PF06969 HemN C-terminal domain BM527_04015 PF04055 Radical SAM superfamily BM527_04020 PF01725 Ham1 family BM527_04025 PF00271 Helicase conserved C-terminal domain BM527_04025 PF00270 DEAD/DEAH box helicase BM527_04030 PF01743 Poly A polymerase head domain BM527_04030 PF12627 Probable RNA and SrmB- binding site of polymerase A BM527_04040 PF01471 Putative peptidoglycan binding domain BM527_04040 PF13401 AAA domain BM527_04050 PF01966 HD domain BM527_04050 PF11871 Domain of unknown function (DUF3391) BM527_04055 PF00694 Aconitase C-terminal domain BM527_04060 PF00330 Aconitase family (aconitate hydratase) BM527_04065 PF00180 Isocitrate/isopropylmalate dehydrogenase BM527_04070 PF08502 LeuA allosteric (dimerisation) domain BM527_04070 PF00682 HMGL-like BM527_04080 PF03952 Enolase, N-terminal domain BM527_04080 PF00113 Enolase, C-terminal TIM barrel domain BM527_04085 PF00117 Glutamine amidotransferase class-I BM527_04085 PF06418 CTP synthase N-terminus BM527_04090 PF00488 MutS domain V BM527_04090 PF05188 MutS domain II BM527_04090 PF05192 MutS domain III BM527_04090 PF05190 MutS family domain IV BM527_04090 PF01624 MutS domain I BM527_04095 PF02464 Competence-damaged protein BM527_04100 PF00154 recA bacterial DNA recombination protein BM527_04105 PF00005 ABC transporter BM527_04110 PF12679 ABC-2 family transporter protein BM527_04125 PF00005 ABC transporter BM527_04130 PF03379 CcmB protein BM527_04135 PF01578 Cytochrome C assembly protein BM527_04140 PF04995 Heme exporter protein D (CcmD) BM527_04145 PF03100 CcmE BM527_04150 PF01578 Cytochrome C assembly protein BM527_04150 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BM527_04155 PF08534 Redoxin BM527_04160 PF03918 Cytochrome C biogenesis protein BM527_04170 PF04333 MlaA lipoprotein BM527_04175 PF16363 GDP-mannose 4,6 dehydratase BM527_04185 PF00854 POT family BM527_04195 PF00005 ABC transporter BM527_04205 PF10531 SLBB domain BM527_04205 PF02563 Polysaccharide biosynthesis/export protein BM527_04215 PF00953 Glycosyl transferase family 4 BM527_04220 PF00535 Glycosyl transferase family 2 BM527_04230 PF00483 Nucleotidyl transferase BM527_04235 PF10531 SLBB domain BM527_04240 PF00180 Isocitrate/isopropylmalate dehydrogenase BM527_04240 PF18324 Hypothetical protein TT1725 BM527_04255 PF03641 Possible lysine decarboxylase BM527_04255 PF11892 Domain of unknown function (DUF3412) BM527_04255 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BM527_04260 PF00072 Response regulator receiver domain BM527_04260 PF00990 Diguanylate cyclase, GGDEF domain BM527_04265 PF14489 QueF-like protein BM527_04265 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BM527_04270 PF07348 Syd protein (SUKH-2) BM527_04300 PF04287 tRNA pseudouridine synthase C BM527_04305 PF00849 RNA pseudouridylate synthase BM527_04310 PF00258 Flavodoxin BM527_04315 PF00132 Bacterial transferase hexapeptide (six repeats) BM527_04315 PF14602 Hexapeptide repeat of succinyl-transferase BM527_04315 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BM527_04320 PF01966 HD domain BM527_04320 PF08335 GlnD PII-uridylyltransferase BM527_04320 PF01842 ACT domain BM527_04320 PF01909 Nucleotidyltransferase domain BM527_04325 PF00557 Metallopeptidase family M24 BM527_04330 PF00318 Ribosomal protein S2 BM527_04335 PF00889 Elongation factor TS BM527_04340 PF00696 Amino acid kinase family BM527_04345 PF01765 Ribosome recycling factor BM527_04350 PF01255 Putative undecaprenyl diphosphate synthase BM527_04360 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BM527_04360 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BM527_04360 PF13288 DXP reductoisomerase C-terminal domain BM527_04365 PF17820 PDZ domain BM527_04365 PF02163 Peptidase family M50 BM527_04370 PF01103 Surface antigen BM527_04370 PF07244 Surface antigen variable number repeat BM527_04375 PF03938 Outer membrane protein (OmpH-like) BM527_04380 PF07977 FabA-like domain BM527_04385 PF00132 Bacterial transferase hexapeptide (six repeats) BM527_04385 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BM527_04390 PF02684 Lipid-A-disaccharide synthetase BM527_04395 PF01351 Ribonuclease HII BM527_04400 PF14579 Helix-hairpin-helix motif BM527_04400 PF01336 OB-fold nucleic acid binding domain BM527_04400 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM527_04400 PF02811 PHP domain BM527_04400 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM527_04405 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BM527_04410 PF11734 TilS substrate C-terminal domain BM527_04410 PF09179 TilS substrate binding domain BM527_04410 PF01171 PP-loop family BM527_04415 PF03707 Bacterial signalling protein N terminal repeat BM527_04415 PF00990 Diguanylate cyclase, GGDEF domain BM527_04415 PF00563 EAL domain BM527_04420 PF02254 TrkA-N domain BM527_04420 PF02080 TrkA-C domain BM527_04420 PF00999 Sodium/hydrogen exchanger family BM527_04430 PF14437 MafB19-like deaminase BM527_04435 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM527_04435 PF01464 Transglycosylase SLT domain BM527_04440 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BM527_04440 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BM527_04440 PF02769 AIR synthase related protein, C-terminal domain BM527_04450 PF01713 Smr domain BM527_04475 PF02384 N-6 DNA Methylase BM527_04480 PF01420 Type I restriction modification DNA specificity domain BM527_04495 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BM527_04495 PF18766 SWI2/SNF2 ATPase BM527_04495 PF11867 Domain of unknown function (DUF3387) BM527_04580 PF05736 OprF membrane domain BM527_04580 PF00691 OmpA family BM527_04585 PF00664 ABC transporter transmembrane region BM527_04585 PF00005 ABC transporter BM527_04585 PF03412 Peptidase C39 family BM527_04590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM527_04590 PF00529 HlyD membrane-fusion protein of T1SS BM527_04595 PF00072 Response regulator receiver domain BM527_04595 PF00196 Bacterial regulatory proteins, luxR family BM527_04635 PF01584 CheW-like domain BM527_04635 PF00072 Response regulator receiver domain BM527_04640 PF01739 CheR methyltransferase, SAM binding domain BM527_04640 PF03705 CheR methyltransferase, all-alpha domain BM527_04645 PF00460 Flagella basal body rod protein BM527_04650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM527_04650 PF00460 Flagella basal body rod protein BM527_04655 PF03963 Flagellar hook capping protein - N-terminal region BM527_04655 PF13860 FlgD Ig-like domain BM527_04655 PF13861 FlgD Tudor-like domain BM527_04660 PF07559 Flagellar basal body protein FlaE BM527_04660 PF00460 Flagella basal body rod protein BM527_04660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM527_04665 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM527_04665 PF00460 Flagella basal body rod protein BM527_04670 PF00460 Flagella basal body rod protein BM527_04670 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BM527_04675 PF02107 Flagellar L-ring protein BM527_04680 PF02119 Flagellar P-ring protein BM527_04685 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BM527_04685 PF10135 Rod binding protein BM527_04705 PF07196 Flagellin hook IN motif BM527_04705 PF00700 Bacterial flagellin C-terminal helical region BM527_04705 PF00669 Bacterial flagellin N-terminal helical region BM527_04710 PF00700 Bacterial flagellin C-terminal helical region BM527_04710 PF07196 Flagellin hook IN motif BM527_04710 PF00669 Bacterial flagellin N-terminal helical region BM527_04715 PF00669 Bacterial flagellin N-terminal helical region BM527_04715 PF07196 Flagellin hook IN motif BM527_04715 PF00700 Bacterial flagellin C-terminal helical region BM527_04720 PF03646 FlaG protein BM527_04725 PF02465 Flagellar hook-associated protein 2 N-terminus BM527_04725 PF07195 Flagellar hook-associated protein 2 C-terminus BM527_04725 PF07196 Flagellin hook IN motif BM527_04730 PF02561 Flagellar protein FliS BM527_04740 PF02719 Polysaccharide biosynthesis protein BM527_04745 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM527_04750 PF02348 Cytidylyltransferase BM527_04755 PF03102 NeuB family BM527_04755 PF08666 SAF domain BM527_04805 PF11380 Stealth protein CR2, conserved region 2 BM527_04805 PF17102 Stealth protein CR3, conserved region 3 BM527_04805 PF17101 Stealth protein CR1, conserved region 1 BM527_04815 PF02350 UDP-N-acetylglucosamine 2-epimerase BM527_04855 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM527_04860 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BM527_04860 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BM527_04860 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BM527_04865 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BM527_04865 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BM527_04870 PF00132 Bacterial transferase hexapeptide (six repeats) BM527_04875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM527_04880 PF01467 Cytidylyltransferase-like BM527_04885 PF00669 Bacterial flagellin N-terminal helical region BM527_04885 PF00700 Bacterial flagellin C-terminal helical region BM527_04890 PF00158 Sigma-54 interaction domain BM527_04890 PF00072 Response regulator receiver domain BM527_04890 PF02954 Bacterial regulatory protein, Fis family BM527_04895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_04895 PF00989 PAS fold BM527_04895 PF00512 His Kinase A (phospho-acceptor) domain BM527_04900 PF00158 Sigma-54 interaction domain BM527_04900 PF02954 Bacterial regulatory protein, Fis family BM527_04905 PF02049 Flagellar hook-basal body complex protein FliE BM527_04910 PF01514 Secretory protein of YscJ/FliF family BM527_04910 PF08345 Flagellar M-ring protein C-terminal BM527_04915 PF14841 FliG middle domain BM527_04915 PF14842 FliG N-terminal domain BM527_04915 PF01706 FliG C-terminal domain BM527_04925 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM527_04925 PF18269 T3SS EscN ATPase C-terminal domain BM527_04945 PF02154 Flagellar motor switch protein FliM BM527_04945 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BM527_04950 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BM527_04955 PF04347 Flagellar biosynthesis protein, FliO BM527_04960 PF00813 FliP family BM527_04965 PF01313 Bacterial export proteins, family 3 BM527_04970 PF01311 Bacterial export proteins, family 1 BM527_04975 PF01312 FlhB HrpN YscU SpaS Family BM527_04980 PF00771 FHIPEP family BM527_04985 PF00448 SRP54-type protein, GTPase domain BM527_04990 PF10609 NUBPL iron-transfer P-loop NTPase BM527_04995 PF04539 Sigma-70 region 3 BM527_04995 PF04542 Sigma-70 region 2 BM527_04995 PF04545 Sigma-70, region 4 BM527_05000 PF00072 Response regulator receiver domain BM527_05005 PF04344 Chemotaxis phosphatase, CheZ BM527_05010 PF01627 Hpt domain BM527_05010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_05010 PF02895 Signal transducing histidine kinase, homodimeric domain BM527_05010 PF01584 CheW-like domain BM527_05010 PF07194 P2 response regulator binding domain BM527_05015 PF01339 CheB methylesterase BM527_05015 PF00072 Response regulator receiver domain BM527_05020 PF13614 AAA domain BM527_05030 PF01584 CheW-like domain BM527_05040 PF04204 Homoserine O-succinyltransferase BM527_05045 PF00809 Pterin binding enzyme BM527_05045 PF02965 Vitamin B12 dependent methionine synthase, activation domain BM527_05045 PF02607 B12 binding domain BM527_05045 PF02310 B12 binding domain BM527_05045 PF02574 Homocysteine S-methyltransferase BM527_05050 PF02310 B12 binding domain BM527_05050 PF02607 B12 binding domain BM527_05050 PF02965 Vitamin B12 dependent methionine synthase, activation domain BM527_05050 PF00809 Pterin binding enzyme BM527_05050 PF02574 Homocysteine S-methyltransferase BM527_05060 PF06865 Pyrimidine/purine nucleoside phosphorylase BM527_05065 PF03466 LysR substrate binding domain BM527_05065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_05070 PF03466 LysR substrate binding domain BM527_05070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_05075 PF00484 Carbonic anhydrase BM527_05080 PF00916 Sulfate permease family BM527_05080 PF01740 STAS domain BM527_05090 PF00440 Bacterial regulatory proteins, tetR family BM527_05090 PF13977 BetI-type transcriptional repressor, C-terminal BM527_05095 PF05649 Peptidase family M13 BM527_05095 PF01431 Peptidase family M13 BM527_05110 PF01411 tRNA synthetases class II (A) BM527_05110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BM527_05110 PF02272 DHHA1 domain BM527_05115 PF02599 Global regulator protein family BM527_05130 PF03061 Thioesterase superfamily BM527_05140 PF00682 HMGL-like BM527_05140 PF02436 Conserved carboxylase domain BM527_05140 PF00364 Biotin-requiring enzyme BM527_05145 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BM527_05150 PF00005 ABC transporter BM527_05155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BM527_05155 PF00005 ABC transporter BM527_05160 PF00528 Binding-protein-dependent transport system inner membrane component BM527_05160 PF12911 N-terminal TM domain of oligopeptide transport permease C BM527_05165 PF00528 Binding-protein-dependent transport system inner membrane component BM527_05170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BM527_05175 PF00158 Sigma-54 interaction domain BM527_05175 PF02954 Bacterial regulatory protein, Fis family BM527_05180 PF04012 PspA/IM30 family BM527_05195 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BM527_05200 PF18024 Helix-turn-helix domain BM527_05200 PF00158 Sigma-54 interaction domain BM527_05210 PF14497 Glutathione S-transferase, C-terminal domain BM527_05210 PF02798 Glutathione S-transferase, N-terminal domain BM527_05215 PF01037 Lrp/AsnC ligand binding domain BM527_05220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BM527_05220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BM527_05235 PF03301 Tryptophan 2,3-dioxygenase BM527_05240 PF00593 TonB dependent receptor BM527_05245 PF07715 TonB-dependent Receptor Plug Domain BM527_05245 PF00593 TonB dependent receptor BM527_05280 PF01618 MotA/TolQ/ExbB proton channel family BM527_05285 PF01618 MotA/TolQ/ExbB proton channel family BM527_05290 PF02472 Biopolymer transport protein ExbD/TolR BM527_05295 PF03544 Gram-negative bacterial TonB protein C-terminal BM527_05305 PF13718 GNAT acetyltransferase 2 BM527_05305 PF17176 tRNA-binding domain BM527_05305 PF05127 Helicase BM527_05305 PF08351 Domain of unknown function (DUF1726) BM527_05345 PF00583 Acetyltransferase (GNAT) family BM527_05355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_05355 PF03466 LysR substrate binding domain BM527_05360 PF07690 Major Facilitator Superfamily BM527_05365 PF00296 Luciferase-like monooxygenase BM527_05370 PF00248 Aldo/keto reductase family BM527_05390 PF13533 Biotin-lipoyl like BM527_05395 PF01047 MarR family BM527_05425 PF13438 Domain of unknown function (DUF4113) BM527_05425 PF00817 impB/mucB/samB family BM527_05425 PF11799 impB/mucB/samB family C-terminal domain BM527_05430 PF00717 Peptidase S24-like BM527_05435 PF02811 PHP domain BM527_05435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM527_05435 PF00929 Exonuclease BM527_05435 PF11490 DNA polymerase III polC-type N-terminus II BM527_05435 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM527_05435 PF14579 Helix-hairpin-helix motif BM527_05450 PF18273 Type III R-M EcoP15I C-terminal domain BM527_05450 PF01555 DNA methylase BM527_05550 PF13091 PLD-like domain BM527_05555 PF00072 Response regulator receiver domain BM527_05555 PF00158 Sigma-54 interaction domain BM527_05555 PF02954 Bacterial regulatory protein, Fis family BM527_05560 PF10411 Disulfide bond isomerase protein N-terminus BM527_05560 PF13098 Thioredoxin-like domain BM527_05575 PF10502 Signal peptidase, peptidase S26 BM527_05585 PF06834 TraU protein BM527_05590 PF06986 Type-1V conjugative transfer system mating pair stabilisation BM527_05605 PF17782 DprA winged helix domain BM527_05605 PF02481 DNA recombination-mediator protein A BM527_05610 PF00270 DEAD/DEAH box helicase BM527_05610 PF00271 Helicase conserved C-terminal domain BM527_05620 PF04231 Endonuclease I BM527_05635 PF00436 Single-strand binding protein family BM527_05650 PF07728 AAA domain (dynein-related subfamily) BM527_05650 PF08406 CbbQ/NirQ/NorQ C-terminal BM527_05670 PF00092 von Willebrand factor type A domain BM527_05675 PF04002 RadC-like JAB domain BM527_05705 PF06122 Conjugative relaxosome accessory transposon protein BM527_05750 PF00717 Peptidase S24-like BM527_05750 PF01381 Helix-turn-helix BM527_05755 PF16658 Class II release factor RF3, C-terminal domain BM527_05755 PF03144 Elongation factor Tu domain 2 BM527_05755 PF00009 Elongation factor Tu GTP binding domain BM527_05760 PF03485 Arginyl tRNA synthetase N terminal domain BM527_05760 PF05746 DALR anticodon binding domain BM527_05760 PF00750 tRNA synthetases class I (R) BM527_05780 PF00291 Pyridoxal-phosphate dependent enzyme BM527_05790 PF13188 PAS domain BM527_05790 PF00563 EAL domain BM527_05790 PF00990 Diguanylate cyclase, GGDEF domain BM527_05790 PF03707 Bacterial signalling protein N terminal repeat BM527_05795 PF04224 Protein of unknown function, DUF417 BM527_05810 PF00990 Diguanylate cyclase, GGDEF domain BM527_05810 PF00072 Response regulator receiver domain BM527_05820 PF00487 Fatty acid desaturase BM527_05825 PF00175 Oxidoreductase NAD-binding domain BM527_05825 PF00042 Globin BM527_05825 PF00970 Oxidoreductase FAD-binding domain BM527_05835 PF03462 PCRF domain BM527_05835 PF00472 RF-1 domain BM527_05840 PF00152 tRNA synthetases class II (D, K and N) BM527_05840 PF01336 OB-fold nucleic acid binding domain BM527_05845 PF02558 Ketopantoate reductase PanE/ApbA BM527_05845 PF08546 Ketopantoate reductase PanE/ApbA C terminal BM527_05850 PF00849 RNA pseudouridylate synthase BM527_05860 PF05193 Peptidase M16 inactive domain BM527_05860 PF00675 Insulinase (Peptidase family M16) BM527_05865 PF04262 Glutamate-cysteine ligase BM527_05880 PF01713 Smr domain BM527_05885 PF05175 Methyltransferase small domain BM527_05890 PF01264 Chorismate synthase BM527_05900 PF04293 SpoVR like protein BM527_05905 PF04285 Protein of unknown function (DUF444) BM527_05910 PF06798 PrkA serine protein kinase C-terminal domain BM527_05910 PF08298 PrkA AAA domain BM527_05920 PF00462 Glutaredoxin BM527_05925 PF00593 TonB dependent receptor BM527_05925 PF07715 TonB-dependent Receptor Plug Domain BM527_05945 PF04324 BFD-like [2Fe-2S] binding domain BM527_05950 PF10417 C-terminal domain of 1-Cys peroxiredoxin BM527_05950 PF00578 AhpC/TSA family BM527_05955 PF00929 Exonuclease BM527_05960 PF18393 MotY N-terminal domain BM527_05960 PF00691 OmpA family BM527_05965 PF03009 Glycerophosphoryl diester phosphodiesterase family BM527_05970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM527_05975 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM527_05980 PF00313 'Cold-shock' DNA-binding domain BM527_05990 PF02225 PA domain BM527_05990 PF04389 Peptidase family M28 BM527_05995 PF00730 HhH-GPD superfamily base excision DNA repair protein BM527_05995 PF00633 Helix-hairpin-helix motif BM527_06000 PF02508 Rnf-Nqr subunit, membrane protein BM527_06005 PF04205 FMN-binding domain BM527_06010 PF03116 NQR2, RnfD, RnfE family BM527_06015 PF10531 SLBB domain BM527_06015 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BM527_06015 PF12838 4Fe-4S dicluster domain BM527_06015 PF13375 RnfC Barrel sandwich hybrid domain BM527_06020 PF04060 Putative Fe-S cluster BM527_06025 PF02508 Rnf-Nqr subunit, membrane protein BM527_06035 PF01554 MatE BM527_06040 PF17757 UvrB interaction domain BM527_06040 PF00271 Helicase conserved C-terminal domain BM527_06040 PF12344 Ultra-violet resistance protein B BM527_06040 PF02151 UvrB/uvrC motif BM527_06040 PF04851 Type III restriction enzyme, res subunit BM527_06050 PF06508 Queuosine biosynthesis protein QueC BM527_06055 PF04055 Radical SAM superfamily BM527_06065 PF00733 Asparagine synthase BM527_06065 PF13537 Glutamine amidotransferase domain BM527_06085 PF02080 TrkA-C domain BM527_06085 PF03600 Citrate transporter BM527_06090 PF00009 Elongation factor Tu GTP binding domain BM527_06095 PF00459 Inositol monophosphatase family BM527_06105 PF01507 Phosphoadenosine phosphosulfate reductase family BM527_06110 PF00474 Sodium:solute symporter family BM527_06115 PF00990 Diguanylate cyclase, GGDEF domain BM527_06125 PF04542 Sigma-70 region 2 BM527_06125 PF08281 Sigma-70, region 4 BM527_06140 PF00092 von Willebrand factor type A domain BM527_06140 PF07584 Aerotolerance regulator N-terminal BM527_06145 PF00092 von Willebrand factor type A domain BM527_06155 PF01882 Protein of unknown function DUF58 BM527_06160 PF07726 ATPase family associated with various cellular activities (AAA) BM527_06160 PF17863 AAA lid domain BM527_06170 PF02803 Thiolase, C-terminal domain BM527_06170 PF00108 Thiolase, N-terminal domain BM527_06175 PF00378 Enoyl-CoA hydratase/isomerase BM527_06175 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BM527_06175 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BM527_06185 PF00563 EAL domain BM527_06185 PF00990 Diguanylate cyclase, GGDEF domain BM527_06185 PF03707 Bacterial signalling protein N terminal repeat BM527_06190 PF00675 Insulinase (Peptidase family M16) BM527_06190 PF05193 Peptidase M16 inactive domain BM527_06195 PF00300 Histidine phosphatase superfamily (branch 1) BM527_06205 PF01595 Cyclin M transmembrane N-terminal domain BM527_06205 PF03471 Transporter associated domain BM527_06205 PF00571 CBS domain BM527_06210 PF01578 Cytochrome C assembly protein BM527_06215 PF02881 SRP54-type protein, helical bundle domain BM527_06215 PF02978 Signal peptide binding domain BM527_06215 PF00448 SRP54-type protein, GTPase domain BM527_06250 PF00873 AcrB/AcrD/AcrF family BM527_06255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM527_06260 PF00005 ABC transporter BM527_06260 PF00664 ABC transporter transmembrane region BM527_06270 PF00886 Ribosomal protein S16 BM527_06275 PF01782 RimM N-terminal domain BM527_06275 PF05239 PRC-barrel domain BM527_06280 PF01746 tRNA (Guanine-1)-methyltransferase BM527_06285 PF01245 Ribosomal protein L19 BM527_06290 PF03458 UPF0126 domain BM527_06295 PF00378 Enoyl-CoA hydratase/isomerase BM527_06300 PF00793 DAHP synthetase I family BM527_06305 PF01817 Chorismate mutase type II BM527_06305 PF02153 Prephenate dehydrogenase BM527_06310 PF00800 Prephenate dehydratase BM527_06310 PF01817 Chorismate mutase type II BM527_06315 PF00072 Response regulator receiver domain BM527_06320 PF01253 Translation initiation factor SUI1 BM527_06330 PF00072 Response regulator receiver domain BM527_06330 PF00486 Transcriptional regulatory protein, C terminal BM527_06340 PF03707 Bacterial signalling protein N terminal repeat BM527_06340 PF00990 Diguanylate cyclase, GGDEF domain BM527_06340 PF00563 EAL domain BM527_06350 PF00512 His Kinase A (phospho-acceptor) domain BM527_06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_06360 PF00158 Sigma-54 interaction domain BM527_06360 PF00072 Response regulator receiver domain BM527_06375 PF01336 OB-fold nucleic acid binding domain BM527_06375 PF02938 GAD domain BM527_06375 PF00152 tRNA synthetases class II (D, K and N) BM527_06380 PF00293 NUDIX domain BM527_06395 PF17864 RuvB AAA lid domain BM527_06395 PF05491 RuvB C-terminal winged helix domain BM527_06395 PF05496 Holliday junction DNA helicase RuvB P-loop domain BM527_06400 PF03061 Thioesterase superfamily BM527_06405 PF01618 MotA/TolQ/ExbB proton channel family BM527_06410 PF02472 Biopolymer transport protein ExbD/TolR BM527_06420 PF07676 WD40-like Beta Propeller Repeat BM527_06420 PF04052 TolB amino-terminal domain BM527_06425 PF00691 OmpA family BM527_06430 PF13174 Tetratricopeptide repeat BM527_06430 PF16331 TolA binding protein trimerisation BM527_06440 PF02445 Quinolinate synthetase A protein BM527_06455 PF00593 TonB dependent receptor BM527_06455 PF07715 TonB-dependent Receptor Plug Domain BM527_06465 PF08546 Ketopantoate reductase PanE/ApbA C terminal BM527_06465 PF02558 Ketopantoate reductase PanE/ApbA BM527_06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_06475 PF09308 LuxQ, periplasmic BM527_06475 PF00072 Response regulator receiver domain BM527_06475 PF00512 His Kinase A (phospho-acceptor) domain BM527_06485 PF01118 Semialdehyde dehydrogenase, NAD binding domain BM527_06485 PF02774 Semialdehyde dehydrogenase, dimerisation domain BM527_06490 PF00990 Diguanylate cyclase, GGDEF domain BM527_06490 PF03707 Bacterial signalling protein N terminal repeat BM527_06490 PF00563 EAL domain BM527_06505 PF01863 Protein of unknown function DUF45 BM527_06510 PF00571 CBS domain BM527_06515 PF00873 AcrB/AcrD/AcrF family BM527_06525 PF08361 MAATS-type transcriptional repressor, C-terminal region BM527_06525 PF00440 Bacterial regulatory proteins, tetR family BM527_06530 PF07715 TonB-dependent Receptor Plug Domain BM527_06530 PF00593 TonB dependent receptor BM527_06540 PF00873 AcrB/AcrD/AcrF family BM527_06550 PF00990 Diguanylate cyclase, GGDEF domain BM527_06560 PF02470 MlaD protein BM527_06565 PF04403 Paraquat-inducible protein A BM527_06575 PF01336 OB-fold nucleic acid binding domain BM527_06575 PF00152 tRNA synthetases class II (D, K and N) BM527_06585 PF01699 Sodium/calcium exchanger protein BM527_06590 PF18030 RimK PreATP-grasp domain BM527_06590 PF08443 RimK-like ATP-grasp domain BM527_06610 PF00202 Aminotransferase class-III BM527_06615 PF04055 Radical SAM superfamily BM527_06615 PF06968 Biotin and Thiamin Synthesis associated domain BM527_06620 PF00155 Aminotransferase class I and II BM527_06625 PF08241 Methyltransferase domain BM527_06635 PF03575 Peptidase family S51 BM527_06640 PF01451 Low molecular weight phosphotyrosine protein phosphatase BM527_06645 PF01032 FecCD transport family BM527_06650 PF00005 ABC transporter BM527_06655 PF01474 Class-II DAHP synthetase family BM527_06660 PF13493 Domain of unknown function (DUF4118) BM527_06660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_06660 PF00512 His Kinase A (phospho-acceptor) domain BM527_06660 PF02702 Osmosensitive K+ channel His kinase sensor domain BM527_06665 PF00486 Transcriptional regulatory protein, C terminal BM527_06665 PF00072 Response regulator receiver domain BM527_06670 PF02254 TrkA-N domain BM527_06670 PF02080 TrkA-C domain BM527_06675 PF02386 Cation transport protein BM527_06690 PF00005 ABC transporter BM527_06690 PF00664 ABC transporter transmembrane region BM527_06695 PF06463 Molybdenum Cofactor Synthesis C BM527_06695 PF04055 Radical SAM superfamily BM527_06705 PF00486 Transcriptional regulatory protein, C terminal BM527_06705 PF00072 Response regulator receiver domain BM527_06715 PF00749 tRNA synthetases class I (E and Q), catalytic domain BM527_06740 PF01207 Dihydrouridine synthase (Dus) BM527_06750 PF13472 GDSL-like Lipase/Acylhydrolase family BM527_06755 PF00005 ABC transporter BM527_06765 PF08338 Domain of unknown function (DUF1731) BM527_06765 PF01370 NAD dependent epimerase/dehydratase family BM527_06770 PF02152 Dihydroneopterin aldolase BM527_06775 PF01594 AI-2E family transporter BM527_06780 PF08918 PhoQ Sensor BM527_06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_06785 PF00072 Response regulator receiver domain BM527_06785 PF00486 Transcriptional regulatory protein, C terminal BM527_06800 PF03795 YCII-related domain BM527_06805 PF00290 Tryptophan synthase alpha chain BM527_06810 PF00291 Pyridoxal-phosphate dependent enzyme BM527_06815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BM527_06815 PF00218 Indole-3-glycerol phosphate synthase BM527_06820 PF00591 Glycosyl transferase family, a/b domain BM527_06820 PF02885 Glycosyl transferase family, helical bundle domain BM527_06825 PF00117 Glutamine amidotransferase class-I BM527_06830 PF04715 Anthranilate synthase component I, N terminal region BM527_06830 PF00425 chorismate binding enzyme BM527_06835 PF02811 PHP domain BM527_06840 PF01300 Telomere recombination BM527_06845 PF02616 Segregation and condensation protein ScpA BM527_06850 PF04079 Segregation and condensation complex subunit ScpB BM527_06855 PF00849 RNA pseudouridylate synthase BM527_06855 PF01479 S4 domain BM527_06860 PF00248 Aldo/keto reductase family BM527_06865 PF12464 Maltose acetyltransferase BM527_06865 PF14602 Hexapeptide repeat of succinyl-transferase BM527_06880 PF04286 Protein of unknown function (DUF445) BM527_06885 PF05724 Thiopurine S-methyltransferase (TPMT) BM527_06890 PF04355 SmpA / OmlA family BM527_06895 PF02463 RecF/RecN/SMC N terminal domain BM527_06900 PF00210 Ferritin-like domain BM527_06915 PF00465 Iron-containing alcohol dehydrogenase BM527_06930 PF00561 alpha/beta hydrolase fold BM527_06940 PF07715 TonB-dependent Receptor Plug Domain BM527_06940 PF00593 TonB dependent receptor BM527_06945 PF00196 Bacterial regulatory proteins, luxR family BM527_06945 PF00072 Response regulator receiver domain BM527_06955 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM527_06955 PF00072 Response regulator receiver domain BM527_06955 PF01627 Hpt domain BM527_06955 PF00512 His Kinase A (phospho-acceptor) domain BM527_06955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_06965 PF01025 GrpE BM527_06970 PF00012 Hsp70 protein BM527_06975 PF00684 DnaJ central domain BM527_06975 PF01556 DnaJ C terminal domain BM527_06975 PF00226 DnaJ domain BM527_06980 PF01322 Cytochrome C' BM527_06985 PF00563 EAL domain BM527_06985 PF12792 CSS motif domain associated with EAL BM527_06990 PF13193 AMP-binding enzyme C-terminal domain BM527_06990 PF16177 Acetyl-coenzyme A synthetase N-terminus BM527_06990 PF00501 AMP-binding enzyme BM527_07000 PF05173 Dihydrodipicolinate reductase, C-terminus BM527_07000 PF01113 Dihydrodipicolinate reductase, N-terminus BM527_07005 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BM527_07005 PF00117 Glutamine amidotransferase class-I BM527_07010 PF02142 MGS-like domain BM527_07010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BM527_07010 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BM527_07015 PF03449 Transcription elongation factor, N-terminal BM527_07015 PF01272 Transcription elongation factor, GreA/GreB, C-term BM527_07020 PF03150 Di-haem cytochrome c peroxidase BM527_07020 PF00034 Cytochrome c BM527_07020 PF14376 Haem-binding domain BM527_07025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_07025 PF00672 HAMP domain BM527_07025 PF12729 Four helix bundle sensory module for signal transduction BM527_07040 PF00011 Hsp20/alpha crystallin family BM527_07045 PF00871 Acetokinase family BM527_07050 PF01515 Phosphate acetyl/butaryl transferase BM527_07050 PF07085 DRTGG domain BM527_07060 PF00795 Carbon-nitrogen hydrolase BM527_07065 PF03471 Transporter associated domain BM527_07065 PF00571 CBS domain BM527_07070 PF02130 Uncharacterized protein family UPF0054 BM527_07075 PF02562 PhoH-like protein BM527_07080 PF00919 Uncharacterized protein family UPF0004 BM527_07080 PF01938 TRAM domain BM527_07080 PF04055 Radical SAM superfamily BM527_07085 PF01494 FAD binding domain BM527_07105 PF01400 Astacin (Peptidase family M12A) BM527_07105 PF14200 Ricin-type beta-trefoil lectin domain-like BM527_07125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BM527_07145 PF00593 TonB dependent receptor BM527_07145 PF07715 TonB-dependent Receptor Plug Domain BM527_07165 PF01037 Lrp/AsnC ligand binding domain BM527_07170 PF03061 Thioesterase superfamily BM527_07175 PF01613 Flavin reductase like domain BM527_07185 PF01235 Sodium:alanine symporter family BM527_07190 PF01926 50S ribosome-binding GTPase BM527_07190 PF06071 Protein of unknown function (DUF933) BM527_07195 PF01195 Peptidyl-tRNA hydrolase BM527_07200 PF01386 Ribosomal L25p family BM527_07200 PF14693 Ribosomal protein TL5, C-terminal domain BM527_07205 PF08240 Alcohol dehydrogenase GroES-like domain BM527_07205 PF00107 Zinc-binding dehydrogenase BM527_07220 PF14572 Phosphoribosyl synthetase-associated domain BM527_07220 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BM527_07230 PF00288 GHMP kinases N terminal domain BM527_07230 PF08544 GHMP kinases C terminal BM527_07240 PF01488 Shikimate / quinate 5-dehydrogenase BM527_07240 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BM527_07240 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BM527_07245 PF03462 PCRF domain BM527_07245 PF00472 RF-1 domain BM527_07250 PF17827 PrmC N-terminal domain BM527_07250 PF13847 Methyltransferase domain BM527_07255 PF11849 Domain of unknown function (DUF3369) BM527_07265 PF04247 Invasion gene expression up-regulator, SirB BM527_07280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_07280 PF03466 LysR substrate binding domain BM527_07290 PF04241 Protein of unknown function (DUF423) BM527_07295 PF18125 RlmM ferredoxin-like domain BM527_07295 PF01728 FtsJ-like methyltransferase BM527_07300 PF03764 Elongation factor G, domain IV BM527_07300 PF03144 Elongation factor Tu domain 2 BM527_07300 PF00679 Elongation factor G C-terminus BM527_07300 PF14492 Elongation Factor G, domain II BM527_07300 PF00009 Elongation factor Tu GTP binding domain BM527_07305 PF11992 Domain of unknown function (DUF3488) BM527_07305 PF13559 Domain of unknown function (DUF4129) BM527_07305 PF01841 Transglutaminase-like superfamily BM527_07315 PF17863 AAA lid domain BM527_07315 PF07726 ATPase family associated with various cellular activities (AAA) BM527_07320 PF17206 SeqA protein N-terminal domain BM527_07320 PF03925 SeqA protein C-terminal domain BM527_07325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM527_07325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM527_07325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM527_07325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM527_07330 PF00343 Carbohydrate phosphorylase BM527_07345 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BM527_07355 PF01906 Putative heavy-metal-binding BM527_07360 PF00326 Prolyl oligopeptidase family BM527_07365 PF00990 Diguanylate cyclase, GGDEF domain BM527_07365 PF00563 EAL domain BM527_07365 PF08447 PAS fold BM527_07365 PF08448 PAS fold BM527_07375 PF16655 PhoD-like phosphatase, N-terminal domain BM527_07375 PF09423 PhoD-like phosphatase BM527_07395 PF13333 Integrase core domain BM527_07395 PF00665 Integrase core domain BM527_07395 PF13276 HTH-like domain BM527_07405 PF00375 Sodium:dicarboxylate symporter family BM527_07420 PF01546 Peptidase family M20/M25/M40 BM527_07420 PF07687 Peptidase dimerisation domain BM527_07425 PF03960 ArsC family BM527_07430 PF00367 phosphotransferase system, EIIB BM527_07430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BM527_07430 PF02378 Phosphotransferase system, EIIC BM527_07445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM527_07450 PF04209 homogentisate 1,2-dioxygenase BM527_07455 PF01047 MarR family BM527_07475 PF04264 YceI-like domain BM527_07485 PF01979 Amidohydrolase family BM527_07495 PF07969 Amidohydrolase family BM527_07510 PF05726 Pirin C-terminal cupin domain BM527_07510 PF02678 Pirin BM527_07530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_07530 PF03466 LysR substrate binding domain BM527_07540 PF09411 Lipid A 3-O-deacylase (PagL) BM527_07545 PF00563 EAL domain BM527_07545 PF00990 Diguanylate cyclase, GGDEF domain BM527_07545 PF03707 Bacterial signalling protein N terminal repeat BM527_07550 PF03707 Bacterial signalling protein N terminal repeat BM527_07550 PF00990 Diguanylate cyclase, GGDEF domain BM527_07550 PF00563 EAL domain BM527_07555 PF00873 AcrB/AcrD/AcrF family BM527_07565 PF02254 TrkA-N domain BM527_07565 PF00999 Sodium/hydrogen exchanger family BM527_07570 PF02525 Flavodoxin-like fold BM527_07580 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM527_07585 PF01799 [2Fe-2S] binding domain BM527_07585 PF00111 2Fe-2S iron-sulfur cluster binding domain BM527_07590 PF01638 HxlR-like helix-turn-helix BM527_07595 PF00990 Diguanylate cyclase, GGDEF domain BM527_07595 PF00563 EAL domain BM527_07595 PF05231 MASE1 BM527_07595 PF08447 PAS fold BM527_07595 PF08448 PAS fold BM527_07595 PF13426 PAS domain BM527_07605 PF01979 Amidohydrolase family BM527_07610 PF00576 HIUase/Transthyretin family BM527_07625 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM527_07625 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM527_07630 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM527_07630 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM527_07630 PF01799 [2Fe-2S] binding domain BM527_07630 PF00111 2Fe-2S iron-sulfur cluster binding domain BM527_07635 PF00440 Bacterial regulatory proteins, tetR family BM527_07635 PF08362 YcdC-like protein, C-terminal region BM527_07650 PF00860 Permease family BM527_07655 PF00962 Adenosine/AMP deaminase BM527_07665 PF01590 GAF domain BM527_07665 PF00360 Phytochrome region BM527_07665 PF00563 EAL domain BM527_07665 PF00990 Diguanylate cyclase, GGDEF domain BM527_07670 PF00072 Response regulator receiver domain BM527_07670 PF09308 LuxQ, periplasmic BM527_07670 PF00512 His Kinase A (phospho-acceptor) domain BM527_07670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_07680 PF00593 TonB dependent receptor BM527_07680 PF07715 TonB-dependent Receptor Plug Domain BM527_07685 PF00860 Permease family BM527_07695 PF01546 Peptidase family M20/M25/M40 BM527_07695 PF07687 Peptidase dimerisation domain BM527_07700 PF00266 Aminotransferase class-V BM527_07705 PF01925 Sulfite exporter TauE/SafE BM527_07715 PF01425 Amidase BM527_07755 PF03129 Anticodon binding domain BM527_07755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BM527_07755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BM527_07755 PF02824 TGS domain BM527_07760 PF05198 Translation initiation factor IF-3, N-terminal domain BM527_07760 PF00707 Translation initiation factor IF-3, C-terminal domain BM527_07765 PF01632 Ribosomal protein L35 BM527_07770 PF00453 Ribosomal protein L20 BM527_07775 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BM527_07775 PF01409 tRNA synthetases class II core domain (F) BM527_07780 PF03484 tRNA synthetase B5 domain BM527_07780 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BM527_07780 PF01588 Putative tRNA binding domain BM527_07780 PF03483 B3/4 domain BM527_07780 PF03147 Ferredoxin-fold anticodon binding domain BM527_07785 PF00216 Bacterial DNA-binding protein BM527_07805 PF04073 Aminoacyl-tRNA editing domain BM527_07810 PF01804 Penicillin amidase BM527_07815 PF00933 Glycosyl hydrolase family 3 N terminal domain BM527_07820 PF01923 Cobalamin adenosyltransferase BM527_07830 PF02559 CarD-like/TRCF domain BM527_07830 PF17757 UvrB interaction domain BM527_07830 PF00271 Helicase conserved C-terminal domain BM527_07830 PF03461 TRCF domain BM527_07830 PF00270 DEAD/DEAH box helicase BM527_07840 PF12704 MacB-like periplasmic core domain BM527_07840 PF02687 FtsX-like permease family BM527_07850 PF00512 His Kinase A (phospho-acceptor) domain BM527_07850 PF00072 Response regulator receiver domain BM527_07850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_07850 PF13188 PAS domain BM527_07850 PF08448 PAS fold BM527_07865 PF03372 Endonuclease/Exonuclease/phosphatase family BM527_07900 PF07690 Major Facilitator Superfamily BM527_07910 PF00483 Nucleotidyl transferase BM527_07930 PF00682 HMGL-like BM527_07935 PF02785 Biotin carboxylase C-terminal domain BM527_07935 PF00289 Biotin carboxylase, N-terminal domain BM527_07935 PF00364 Biotin-requiring enzyme BM527_07935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BM527_07940 PF00378 Enoyl-CoA hydratase/isomerase BM527_07945 PF01039 Carboxyl transferase domain BM527_07950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM527_07950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM527_07950 PF02770 Acyl-CoA dehydrogenase, middle domain BM527_07955 PF13411 MerR HTH family regulatory protein BM527_07960 PF00108 Thiolase, N-terminal domain BM527_07960 PF02803 Thiolase, C-terminal domain BM527_07970 PF00266 Aminotransferase class-V BM527_07975 PF00563 EAL domain BM527_07975 PF00990 Diguanylate cyclase, GGDEF domain BM527_07975 PF08447 PAS fold BM527_07975 PF08448 PAS fold BM527_07975 PF05231 MASE1 BM527_07975 PF13426 PAS domain BM527_07985 PF08411 Exonuclease C-terminal BM527_07985 PF00929 Exonuclease BM527_07990 PF01112 Asparaginase BM527_08000 PF02333 Phytase BM527_08030 PF11898 Domain of unknown function (DUF3418) BM527_08030 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BM527_08030 PF04408 Helicase associated domain (HA2) BM527_08030 PF00271 Helicase conserved C-terminal domain BM527_08030 PF00270 DEAD/DEAH box helicase BM527_08045 PF17785 PUA-like domain BM527_08045 PF10672 S-adenosylmethionine-dependent methyltransferase BM527_08050 PF08659 KR domain BM527_08050 PF00698 Acyl transferase domain BM527_08050 PF00109 Beta-ketoacyl synthase, N-terminal domain BM527_08050 PF14765 Polyketide synthase dehydratase BM527_08050 PF16197 Ketoacyl-synthetase C-terminal extension BM527_08050 PF08240 Alcohol dehydrogenase GroES-like domain BM527_08050 PF00550 Phosphopantetheine attachment site BM527_08050 PF02801 Beta-ketoacyl synthase, C-terminal domain BM527_08055 PF00075 RNase H BM527_08060 PF00929 Exonuclease BM527_08075 PF00563 EAL domain BM527_08075 PF12792 CSS motif domain associated with EAL BM527_08080 PF00005 ABC transporter BM527_08085 PF02687 FtsX-like permease family BM527_08085 PF12704 MacB-like periplasmic core domain BM527_08090 PF00375 Sodium:dicarboxylate symporter family BM527_08100 PF04996 Succinylarginine dihydrolase BM527_08105 PF01131 DNA topoisomerase BM527_08105 PF01751 Toprim domain BM527_08105 PF08272 Topoisomerase I zinc-ribbon-like BM527_08105 PF01396 Topoisomerase DNA binding C4 zinc finger BM527_08115 PF12804 MobA-like NTP transferase domain BM527_08120 PF02634 FdhD/NarQ family BM527_08125 PF00384 Molybdopterin oxidoreductase BM527_08130 PF13673 Acetyltransferase (GNAT) domain BM527_08135 PF00072 Response regulator receiver domain BM527_08135 PF00486 Transcriptional regulatory protein, C terminal BM527_08140 PF00512 His Kinase A (phospho-acceptor) domain BM527_08140 PF18698 Histidine kinase sensor domain BM527_08140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_08140 PF00672 HAMP domain BM527_08140 PF00989 PAS fold BM527_08150 PF00575 S1 RNA binding domain BM527_08150 PF10150 Ribonuclease E/G family BM527_08150 PF12111 Polyribonucleotide phosphorylase C terminal BM527_08155 PF01479 S4 domain BM527_08155 PF00849 RNA pseudouridylate synthase BM527_08160 PF13419 Haloacid dehalogenase-like hydrolase BM527_08165 PF02545 Maf-like protein BM527_08170 PF02620 Large ribosomal RNA subunit accumulation protein YceD BM527_08175 PF01783 Ribosomal L32p protein family BM527_08180 PF02504 Fatty acid synthesis protein BM527_08185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BM527_08185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BM527_08190 PF00698 Acyl transferase domain BM527_08200 PF00550 Phosphopantetheine attachment site BM527_08205 PF02801 Beta-ketoacyl synthase, C-terminal domain BM527_08205 PF00109 Beta-ketoacyl synthase, N-terminal domain BM527_08210 PF01063 Amino-transferase class IV BM527_08215 PF02618 YceG-like family BM527_08220 PF02223 Thymidylate kinase BM527_08225 PF09115 DNA polymerase III, delta subunit, C terminal BM527_08230 PF01026 TatD related DNase BM527_08240 PF13460 NAD(P)H-binding BM527_08245 PF00990 Diguanylate cyclase, GGDEF domain BM527_08245 PF17151 Periplasmic sensor domain BM527_08270 PF00561 alpha/beta hydrolase fold BM527_08275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BM527_08275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BM527_08275 PF00378 Enoyl-CoA hydratase/isomerase BM527_08280 PF00108 Thiolase, N-terminal domain BM527_08280 PF02803 Thiolase, C-terminal domain BM527_08285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM527_08285 PF02770 Acyl-CoA dehydrogenase, middle domain BM527_08285 PF12806 Acetyl-CoA dehydrogenase C-terminal like BM527_08285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM527_08315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_08315 PF03466 LysR substrate binding domain BM527_08320 PF01575 MaoC like domain BM527_08330 PF00924 Mechanosensitive ion channel BM527_08335 PF07715 TonB-dependent Receptor Plug Domain BM527_08335 PF00593 TonB dependent receptor BM527_08340 PF01329 Pterin 4 alpha carbinolamine dehydratase BM527_08355 PF00072 Response regulator receiver domain BM527_08360 PF17384 RimP C-terminal SH3 domain BM527_08360 PF02576 RimP N-terminal domain BM527_08365 PF13184 NusA-like KH domain BM527_08365 PF00575 S1 RNA binding domain BM527_08365 PF08529 NusA N-terminal domain BM527_08370 PF04760 Translation initiation factor IF-2, N-terminal region BM527_08370 PF08364 Bacterial translation initiation factor IF-2 associated region BM527_08370 PF11987 Translation-initiation factor 2 BM527_08370 PF00009 Elongation factor Tu GTP binding domain BM527_08375 PF02033 Ribosome-binding factor A BM527_08380 PF01509 TruB family pseudouridylate synthase (N terminal domain) BM527_08380 PF16198 tRNA pseudouridylate synthase B C-terminal domain BM527_08380 PF09157 Pseudouridine synthase II TruB, C-terminal BM527_08390 PF00312 Ribosomal protein S15 BM527_08400 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BM527_08405 PF00849 RNA pseudouridylate synthase BM527_08405 PF01479 S4 domain BM527_08415 PF00795 Carbon-nitrogen hydrolase BM527_08415 PF00583 Acetyltransferase (GNAT) family BM527_08440 PF10417 C-terminal domain of 1-Cys peroxiredoxin BM527_08440 PF00578 AhpC/TSA family BM527_08445 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM527_08445 PF13192 Thioredoxin domain BM527_08485 PF11842 Domain of unknown function (DUF3362) BM527_08485 PF04055 Radical SAM superfamily BM527_08485 PF08497 Radical SAM N-terminal BM527_08500 PF00593 TonB dependent receptor BM527_08500 PF07715 TonB-dependent Receptor Plug Domain BM527_08505 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM527_08505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM527_08515 PF13416 Bacterial extracellular solute-binding protein BM527_08525 PF00005 ABC transporter BM527_08530 PF01066 CDP-alcohol phosphatidyltransferase BM527_08545 PF00563 EAL domain BM527_08545 PF01590 GAF domain BM527_08545 PF00990 Diguanylate cyclase, GGDEF domain BM527_08545 PF00360 Phytochrome region BM527_08565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_08565 PF03466 LysR substrate binding domain BM527_08570 PF07715 TonB-dependent Receptor Plug Domain BM527_08570 PF00593 TonB dependent receptor BM527_08585 PF00005 ABC transporter BM527_08600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM527_08605 PF01668 SmpB protein BM527_08610 PF03364 Polyketide cyclase / dehydrase and lipid transport BM527_08615 PF03658 RnfH family Ubiquitin BM527_08625 PF02028 BCCT, betaine/carnitine/choline family transporter BM527_08630 PF00593 TonB dependent receptor BM527_08630 PF07715 TonB-dependent Receptor Plug Domain BM527_08635 PF13181 Tetratricopeptide repeat BM527_08645 PF03618 Kinase/pyrophosphorylase BM527_08650 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BM527_08650 PF02896 PEP-utilising enzyme, TIM barrel domain BM527_08650 PF00391 PEP-utilising enzyme, mobile domain BM527_08655 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM527_08660 PF01799 [2Fe-2S] binding domain BM527_08660 PF00111 2Fe-2S iron-sulfur cluster binding domain BM527_08680 PF08007 Cupin superfamily protein BM527_08685 PF00211 Adenylate and Guanylate cyclase catalytic domain BM527_08690 PF08328 Adenylosuccinate lyase C-terminal BM527_08690 PF00206 Lyase BM527_08695 PF04356 Protein of unknown function (DUF489) BM527_08705 PF00849 RNA pseudouridylate synthase BM527_08710 PF03971 Monomeric isocitrate dehydrogenase BM527_08715 PF00313 'Cold-shock' DNA-binding domain BM527_08720 PF02617 ATP-dependent Clp protease adaptor protein ClpS BM527_08725 PF07724 AAA domain (Cdc48 subfamily) BM527_08725 PF00004 ATPase family associated with various cellular activities (AAA) BM527_08725 PF02861 Clp amino terminal domain, pathogenicity island component BM527_08725 PF10431 C-terminal, D2-small domain, of ClpB protein BM527_08725 PF17871 AAA lid domain BM527_08730 PF01176 Translation initiation factor 1A / IF-1 BM527_08735 PF04376 Arginine-tRNA-protein transferase, N terminus BM527_08735 PF04377 Arginine-tRNA-protein transferase, C terminus BM527_08740 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BM527_08745 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM527_08750 PF04217 Protein of unknown function, DUF412 BM527_08755 PF01343 Peptidase family S49 BM527_08765 PF00881 Nitroreductase family BM527_08775 PF00710 Asparaginase, N-terminal BM527_08775 PF17763 Glutaminase/Asparaginase C-terminal domain BM527_08780 PF04055 Radical SAM superfamily BM527_08780 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BM527_08785 PF03099 Biotin/lipoate A/B protein ligase family BM527_08790 PF04359 Protein of unknown function (DUF493) BM527_08795 PF00768 D-alanyl-D-alanine carboxypeptidase BM527_08795 PF07943 Penicillin-binding protein 5, C-terminal domain BM527_08800 PF03330 Lytic transglycolase BM527_08800 PF05036 Sporulation related domain BM527_08805 PF01098 Cell cycle protein BM527_08810 PF03717 Penicillin-binding Protein dimerisation domain BM527_08810 PF00905 Penicillin binding protein transpeptidase domain BM527_08815 PF02590 Predicted SPOUT methyltransferase BM527_08825 PF01467 Cytidylyltransferase-like BM527_08830 PF06144 DNA polymerase III, delta subunit BM527_08830 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BM527_08835 PF04390 Lipopolysaccharide-assembly BM527_08840 PF08264 Anticodon-binding domain of tRNA BM527_08840 PF13603 Leucyl-tRNA synthetase, Domain 2 BM527_08840 PF00133 tRNA synthetases class I (I, L, M and V) BM527_08850 PF13654 AAA domain BM527_08850 PF05362 Lon protease (S16) C-terminal proteolytic domain BM527_08855 PF12697 Alpha/beta hydrolase family BM527_08860 PF00990 Diguanylate cyclase, GGDEF domain BM527_08865 PF00106 short chain dehydrogenase BM527_08870 PF01985 CRS1 / YhbY (CRM) domain BM527_08875 PF01728 FtsJ-like methyltransferase BM527_08880 PF06480 FtsH Extracellular BM527_08880 PF00004 ATPase family associated with various cellular activities (AAA) BM527_08880 PF17862 AAA+ lid domain BM527_08880 PF01434 Peptidase family M41 BM527_08885 PF00809 Pterin binding enzyme BM527_08890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM527_08890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM527_08890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM527_08890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM527_08895 PF00121 Triosephosphate isomerase BM527_08900 PF03840 Preprotein translocase SecG subunit BM527_08910 PF13188 PAS domain BM527_08910 PF00563 EAL domain BM527_08910 PF00990 Diguanylate cyclase, GGDEF domain BM527_08910 PF03707 Bacterial signalling protein N terminal repeat BM527_08915 PF01679 Proteolipid membrane potential modulator BM527_08925 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BM527_08925 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BM527_08930 PF02142 MGS-like domain BM527_08930 PF00781 Diacylglycerol kinase catalytic domain BM527_08960 PF00474 Sodium:solute symporter family BM527_08985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BM527_08985 PF00575 S1 RNA binding domain BM527_08985 PF03725 3' exoribonuclease family, domain 2 BM527_08985 PF01138 3' exoribonuclease family, domain 1 BM527_08985 PF00013 KH domain BM527_09120 PF03544 Gram-negative bacterial TonB protein C-terminal BM527_09140 PF07719 Tetratricopeptide repeat BM527_09140 PF13181 Tetratricopeptide repeat BM527_09155 PF02463 RecF/RecN/SMC N terminal domain BM527_09155 PF06470 SMC proteins Flexible Hinge Domain BM527_09160 PF04354 ZipA, C-terminal FtsZ-binding domain BM527_09165 PF00533 BRCA1 C Terminus (BRCT) domain BM527_09165 PF01653 NAD-dependent DNA ligase adenylation domain BM527_09165 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BM527_09165 PF03120 NAD-dependent DNA ligase OB-fold domain BM527_09165 PF12826 Helix-hairpin-helix motif BM527_09180 PF00005 ABC transporter BM527_09180 PF00664 ABC transporter transmembrane region BM527_09185 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BM527_09190 PF03966 Trm112p-like protein BM527_09195 PF02348 Cytidylyltransferase BM527_09205 PF00919 Uncharacterized protein family UPF0004 BM527_09205 PF18693 TRAM domain BM527_09205 PF04055 Radical SAM superfamily BM527_09220 PF00899 ThiF family BM527_09225 PF13409 Glutathione S-transferase, N-terminal domain BM527_09230 PF02678 Pirin BM527_09230 PF05726 Pirin C-terminal cupin domain BM527_09235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM527_09235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM527_09235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM527_09235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM527_09245 PF00285 Citrate synthase, C-terminal domain BM527_09250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BM527_09255 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BM527_09260 PF00890 FAD binding domain BM527_09260 PF02910 Fumarate reductase flavoprotein C-term BM527_09265 PF13085 2Fe-2S iron-sulfur cluster binding domain BM527_09270 PF16870 2-oxoglutarate dehydrogenase C-terminal BM527_09270 PF00676 Dehydrogenase E1 component BM527_09270 PF16078 2-oxoglutarate dehydrogenase N-terminus BM527_09270 PF02779 Transketolase, pyrimidine binding domain BM527_09275 PF02817 e3 binding domain BM527_09275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BM527_09275 PF00364 Biotin-requiring enzyme BM527_09280 PF08442 ATP-grasp domain BM527_09280 PF00549 CoA-ligase BM527_09285 PF00549 CoA-ligase BM527_09285 PF02629 CoA binding domain BM527_09300 PF04820 Tryptophan halogenase BM527_09305 PF04820 Tryptophan halogenase BM527_09315 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BM527_09315 PF03714 Bacterial pullanase-associated domain BM527_09315 PF11852 Domain of unknown function (DUF3372) BM527_09315 PF18494 Pullulanase Ins domain BM527_09315 PF17967 Pullulanase N2 domain BM527_09320 PF01734 Patatin-like phospholipase BM527_09340 PF00128 Alpha amylase, catalytic domain BM527_09340 PF02903 Alpha amylase, N-terminal ig-like domain BM527_09340 PF16657 Maltogenic Amylase, C-terminal domain BM527_09345 PF00128 Alpha amylase, catalytic domain BM527_09345 PF10438 Cyclo-malto-dextrinase C-terminal domain BM527_09345 PF09087 Cyclomaltodextrinase, N-terminal BM527_09355 PF00128 Alpha amylase, catalytic domain BM527_09355 PF02806 Alpha amylase, C-terminal all-beta domain BM527_09355 PF00686 Starch binding domain BM527_09355 PF01833 IPT/TIG domain BM527_09360 PF00356 Bacterial regulatory proteins, lacI family BM527_09365 PF00749 tRNA synthetases class I (E and Q), catalytic domain BM527_09365 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BM527_09370 PF00106 short chain dehydrogenase BM527_09375 PF12262 Bacterial virulence factor lipase N-terminal BM527_09380 PF01343 Peptidase family S49 BM527_09380 PF08496 Peptidase family S49 N-terminal BM527_09395 PF01784 NIF3 (NGG1p interacting factor 3) BM527_09405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM527_09405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM527_09410 PF00255 Glutathione peroxidase BM527_09415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BM527_09415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BM527_09425 PF02770 Acyl-CoA dehydrogenase, middle domain BM527_09425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM527_09425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM527_09430 PF00378 Enoyl-CoA hydratase/isomerase BM527_09435 PF13847 Methyltransferase domain BM527_09445 PF11893 Domain of unknown function (DUF3413) BM527_09445 PF00884 Sulfatase BM527_09450 PF07208 Protein of unknown function (DUF1414) BM527_09455 PF04245 37-kD nucleoid-associated bacterial protein BM527_09465 PF01464 Transglycosylase SLT domain BM527_09465 PF10145 Phage-related minor tail protein BM527_09465 PF01551 Peptidase family M23 BM527_09485 PF06580 Histidine kinase BM527_09485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_09485 PF07694 5TMR of 5TMR-LYT BM527_09490 PF04397 LytTr DNA-binding domain BM527_09490 PF00072 Response regulator receiver domain BM527_09495 PF00365 Phosphofructokinase BM527_09515 PF00072 Response regulator receiver domain BM527_09515 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM527_09515 PF00989 PAS fold BM527_09515 PF01627 Hpt domain BM527_09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_09515 PF00512 His Kinase A (phospho-acceptor) domain BM527_09540 PF00270 DEAD/DEAH box helicase BM527_09540 PF00271 Helicase conserved C-terminal domain BM527_09545 PF01144 Coenzyme A transferase BM527_09550 PF01144 Coenzyme A transferase BM527_09555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_09555 PF03466 LysR substrate binding domain BM527_09570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_09570 PF03466 LysR substrate binding domain BM527_09575 PF03315 Serine dehydratase beta chain BM527_09575 PF03313 Serine dehydratase alpha chain BM527_09580 PF00293 NUDIX domain BM527_09585 PF04715 Anthranilate synthase component I, N terminal region BM527_09585 PF00425 chorismate binding enzyme BM527_09595 PF02646 RmuC family BM527_09600 PF02225 PA domain BM527_09600 PF13860 FlgD Ig-like domain BM527_09600 PF05922 Peptidase inhibitor I9 BM527_09600 PF00082 Subtilase family BM527_09605 PF00676 Dehydrogenase E1 component BM527_09610 PF02779 Transketolase, pyrimidine binding domain BM527_09610 PF02780 Transketolase, C-terminal domain BM527_09615 PF02817 e3 binding domain BM527_09615 PF00364 Biotin-requiring enzyme BM527_09615 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BM527_09620 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BM527_09625 PF00069 Protein kinase domain BM527_09635 PF00132 Bacterial transferase hexapeptide (six repeats) BM527_09640 PF00266 Aminotransferase class-V BM527_09650 PF13185 GAF domain BM527_09660 PF04352 ProQ/FINO family BM527_09660 PF17516 ProQ C-terminal domain BM527_09665 PF00595 PDZ domain BM527_09665 PF11818 C-terminal domain of tail specific protease (DUF3340) BM527_09665 PF17804 Tail specific protease N-terminal domain BM527_09665 PF03572 Peptidase family S41 BM527_09670 PF00209 Sodium:neurotransmitter symporter family BM527_09680 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BM527_09680 PF01433 Peptidase family M1 domain BM527_09680 PF11940 Domain of unknown function (DUF3458) Ig-like fold BM527_09695 PF07044 Protein of unknown function (DUF1329) BM527_09710 PF05088 Bacterial NAD-glutamate dehydrogenase BM527_09715 PF01180 Dihydroorotate dehydrogenase BM527_09720 PF02926 THUMP domain BM527_09720 PF10672 S-adenosylmethionine-dependent methyltransferase BM527_09720 PF01170 Putative RNA methylase family UPF0020 BM527_09740 PF04957 Ribosome modulation factor BM527_09745 PF07977 FabA-like domain BM527_09755 PF00875 DNA photolyase BM527_09755 PF03441 FAD binding domain of DNA photolyase BM527_09760 PF03441 FAD binding domain of DNA photolyase BM527_09760 PF00875 DNA photolyase BM527_09765 PF00875 DNA photolyase BM527_09765 PF03441 FAD binding domain of DNA photolyase BM527_09770 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BM527_09795 PF01219 Prokaryotic diacylglycerol kinase BM527_09800 PF00582 Universal stress protein family BM527_09810 PF01645 Conserved region in glutamate synthase BM527_09815 PF00999 Sodium/hydrogen exchanger family BM527_09820 PF00210 Ferritin-like domain BM527_09825 PF00210 Ferritin-like domain BM527_09835 PF00115 Cytochrome C and Quinol oxidase polypeptide I BM527_09850 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BM527_09850 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BM527_09860 PF00403 Heavy-metal-associated domain BM527_09875 PF13545 Crp-like helix-turn-helix domain BM527_09875 PF00027 Cyclic nucleotide-binding domain BM527_09880 PF00582 Universal stress protein family BM527_09885 PF01171 PP-loop family BM527_09890 PF01734 Patatin-like phospholipase BM527_09910 PF01810 LysE type translocator BM527_09915 PF02146 Sir2 family BM527_09920 PF00581 Rhodanese-like domain BM527_09925 PF08534 Redoxin BM527_09955 PF07715 TonB-dependent Receptor Plug Domain BM527_09955 PF00593 TonB dependent receptor BM527_09970 PF01066 CDP-alcohol phosphatidyltransferase BM527_09975 PF08459 UvrC Helix-hairpin-helix N-terminal BM527_09975 PF02151 UvrB/uvrC motif BM527_09975 PF01541 GIY-YIG catalytic domain BM527_09980 PF00196 Bacterial regulatory proteins, luxR family BM527_09980 PF00072 Response regulator receiver domain BM527_09985 PF17954 Quercetinase C-terminal cupin domain BM527_09985 PF02678 Pirin BM527_09990 PF00155 Aminotransferase class I and II BM527_09995 PF12867 DinB superfamily BM527_09995 PF03781 Sulfatase-modifying factor enzyme 1 BM527_10000 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BM527_10005 PF07681 DoxX BM527_10010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_10010 PF03466 LysR substrate binding domain BM527_10025 PF01027 Inhibitor of apoptosis-promoting Bax1 BM527_10030 PF02635 DsrE/DsrF-like family BM527_10045 PF04358 DsrC like protein BM527_10075 PF07715 TonB-dependent Receptor Plug Domain BM527_10075 PF00593 TonB dependent receptor BM527_10075 PF07715 TonB-dependent Receptor Plug Domain BM527_10075 PF00593 TonB dependent receptor BM527_10080 PF02403 Seryl-tRNA synthetase N-terminal domain BM527_10080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BM527_10085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BM527_10090 PF00004 ATPase family associated with various cellular activities (AAA) BM527_10090 PF16193 AAA C-terminal domain BM527_10090 PF12002 MgsA AAA+ ATPase C terminal BM527_10095 PF03548 Outer membrane lipoprotein carrier protein LolA BM527_10100 PF09397 Ftsk gamma domain BM527_10100 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BM527_10100 PF17854 FtsK alpha domain BM527_10100 PF01580 FtsK/SpoIIIE family BM527_10105 PF01037 Lrp/AsnC ligand binding domain BM527_10110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BM527_10110 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BM527_10115 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BM527_10120 PF18073 Rubredoxin metal binding domain BM527_10135 PF00216 Bacterial DNA-binding protein BM527_10140 PF00575 S1 RNA binding domain BM527_10145 PF02224 Cytidylate kinase BM527_10150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BM527_10155 PF00266 Aminotransferase class-V BM527_10160 PF03989 DNA gyrase C-terminal domain, beta-propeller BM527_10160 PF00521 DNA gyrase/topoisomerase IV, subunit A BM527_10170 PF02867 Ribonucleotide reductase, barrel domain BM527_10170 PF03477 ATP cone domain BM527_10170 PF00317 Ribonucleotide reductase, all-alpha domain BM527_10175 PF00268 Ribonucleotide reductase, small chain BM527_10180 PF00111 2Fe-2S iron-sulfur cluster binding domain BM527_10185 PF00106 short chain dehydrogenase BM527_10195 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM527_10195 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM527_10205 PF00892 EamA-like transporter family BM527_10210 PF01259 SAICAR synthetase BM527_10215 PF06804 NlpB/DapX lipoprotein BM527_10220 PF00701 Dihydrodipicolinate synthetase family BM527_10230 PF00578 AhpC/TSA family BM527_10235 PF01594 AI-2E family transporter BM527_10240 PF01435 Peptidase family M48 BM527_10250 PF03960 ArsC family BM527_10255 PF03358 NADPH-dependent FMN reductase BM527_10270 PF00308 Bacterial dnaA protein BM527_10280 PF02769 AIR synthase related protein, C-terminal domain BM527_10280 PF00586 AIR synthase related protein, N-terminal domain BM527_10285 PF00551 Formyl transferase BM527_10295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM527_10295 PF02770 Acyl-CoA dehydrogenase, middle domain BM527_10295 PF09317 Domain of unknown function (DUF1974) BM527_10295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM527_10305 PF00072 Response regulator receiver domain BM527_10305 PF00196 Bacterial regulatory proteins, luxR family BM527_10310 PF13649 Methyltransferase domain BM527_10315 PF08003 Protein of unknown function (DUF1698) BM527_10320 PF00485 Phosphoribulokinase / Uridine kinase family BM527_10335 PF00128 Alpha amylase, catalytic domain BM527_10340 PF13419 Haloacid dehalogenase-like hydrolase BM527_10345 PF03453 MoeA N-terminal region (domain I and II) BM527_10345 PF03454 MoeA C-terminal region (domain IV) BM527_10345 PF00994 Probable molybdopterin binding domain BM527_10350 PF01554 MatE BM527_10365 PF00004 ATPase family associated with various cellular activities (AAA) BM527_10365 PF01434 Peptidase family M41 BM527_10365 PF17862 AAA+ lid domain BM527_10370 PF00291 Pyridoxal-phosphate dependent enzyme BM527_10405 PF02371 Transposase IS116/IS110/IS902 family BM527_10405 PF01548 Transposase BM527_10435 PF02567 Phenazine biosynthesis-like protein BM527_10445 PF00378 Enoyl-CoA hydratase/isomerase BM527_10460 PF00255 Glutathione peroxidase BM527_10465 PF02525 Flavodoxin-like fold BM527_10470 PF02469 Fasciclin domain BM527_10475 PF01053 Cys/Met metabolism PLP-dependent enzyme BM527_10490 PF00155 Aminotransferase class I and II BM527_10495 PF10459 Peptidase S46 BM527_10500 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BM527_10515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM527_10515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM527_10515 PF12806 Acetyl-CoA dehydrogenase C-terminal like BM527_10515 PF02770 Acyl-CoA dehydrogenase, middle domain BM527_10520 PF07883 Cupin domain BM527_10520 PF12833 Helix-turn-helix domain BM527_10525 PF07715 TonB-dependent Receptor Plug Domain BM527_10525 PF00593 TonB dependent receptor BM527_10535 PF00326 Prolyl oligopeptidase family BM527_10535 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BM527_10540 PF00873 AcrB/AcrD/AcrF family BM527_10545 PF13533 Biotin-lipoyl like BM527_10555 PF01012 Electron transfer flavoprotein domain BM527_10555 PF00766 Electron transfer flavoprotein FAD-binding domain BM527_10560 PF01012 Electron transfer flavoprotein domain BM527_10570 PF00816 H-NS histone family BM527_10575 PF00561 alpha/beta hydrolase fold BM527_10585 PF00258 Flavodoxin BM527_10590 PF00672 HAMP domain BM527_10590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_10595 PF01475 Ferric uptake regulator family BM527_10600 PF01063 Amino-transferase class IV BM527_10605 PF02626 Carboxyltransferase domain, subdomain A and B BM527_10610 PF02682 Carboxyltransferase domain, subdomain C and D BM527_10615 PF03746 LamB/YcsF family BM527_10620 PF17783 CvfB-like winged helix domain BM527_10620 PF13509 S1 domain BM527_10625 PF02566 OsmC-like protein BM527_10630 PF13533 Biotin-lipoyl like BM527_10635 PF00873 AcrB/AcrD/AcrF family BM527_10640 PF00873 AcrB/AcrD/AcrF family BM527_10655 PF00155 Aminotransferase class I and II BM527_10665 PF01966 HD domain BM527_10665 PF13286 Phosphohydrolase-associated domain BM527_10670 PF00174 Oxidoreductase molybdopterin binding domain BM527_10675 PF01794 Ferric reductase like transmembrane component BM527_10690 PF02810 SEC-C motif BM527_10700 PF00107 Zinc-binding dehydrogenase BM527_10700 PF08240 Alcohol dehydrogenase GroES-like domain BM527_10710 PF02770 Acyl-CoA dehydrogenase, middle domain BM527_10710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM527_10710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM527_10735 PF04055 Radical SAM superfamily BM527_10735 PF06969 HemN C-terminal domain BM527_10740 PF03459 TOBE domain BM527_10740 PF00005 ABC transporter BM527_10745 PF00528 Binding-protein-dependent transport system inner membrane component BM527_10755 PF02391 MoaE protein BM527_10760 PF02597 ThiS family BM527_10765 PF01967 MoaC family BM527_10770 PF00994 Probable molybdopterin binding domain BM527_10775 PF00899 ThiF family BM527_10785 PF12729 Four helix bundle sensory module for signal transduction BM527_10785 PF00672 HAMP domain BM527_10785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_10790 PF03969 AFG1-like ATPase BM527_10800 PF00106 short chain dehydrogenase BM527_10815 PF00589 Phage integrase family BM527_10815 PF13495 Phage integrase, N-terminal SAM-like domain BM527_10850 PF00037 4Fe-4S binding domain BM527_10860 PF03435 Saccharopine dehydrogenase NADP binding domain BM527_10865 PF00155 Aminotransferase class I and II BM527_10890 PF08267 Cobalamin-independent synthase, N-terminal domain BM527_10890 PF01717 Cobalamin-independent synthase, Catalytic domain BM527_10900 PF00892 EamA-like transporter family BM527_10910 PF02245 Methylpurine-DNA glycosylase (MPG) BM527_10925 PF13538 UvrD-like helicase C-terminal domain BM527_10930 PF13361 UvrD-like helicase C-terminal domain BM527_10930 PF12705 PD-(D/E)XK nuclease superfamily BM527_10930 PF00580 UvrD/REP helicase N-terminal domain BM527_10935 PF17946 RecC C-terminal domain BM527_10980 PF18623 TnsE C-terminal domain BM527_11020 PF00873 AcrB/AcrD/AcrF family BM527_11025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM527_11045 PF03773 Predicted permease BM527_11055 PF00873 AcrB/AcrD/AcrF family BM527_11060 PF00529 HlyD membrane-fusion protein of T1SS BM527_11060 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM527_11075 PF16916 Dimerisation domain of Zinc Transporter BM527_11075 PF01545 Cation efflux family BM527_11090 PF13411 MerR HTH family regulatory protein BM527_11100 PF02463 RecF/RecN/SMC N terminal domain BM527_11100 PF06470 SMC proteins Flexible Hinge Domain BM527_11115 PF14490 Helix-hairpin-helix containing domain BM527_11115 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BM527_11115 PF13538 UvrD-like helicase C-terminal domain BM527_11120 PF01527 Transposase BM527_11125 PF13276 HTH-like domain BM527_11125 PF13683 Integrase core domain BM527_11135 PF00239 Resolvase, N terminal domain BM527_11135 PF02796 Helix-turn-helix domain of resolvase BM527_11160 PF00589 Phage integrase family BM527_11160 PF02899 Phage integrase, N-terminal SAM-like domain BM527_11170 PF00501 AMP-binding enzyme BM527_11175 PF00563 EAL domain BM527_11175 PF00990 Diguanylate cyclase, GGDEF domain BM527_11175 PF03707 Bacterial signalling protein N terminal repeat BM527_11180 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BM527_11180 PF12706 Beta-lactamase superfamily domain BM527_11180 PF17770 Ribonuclease J C-terminal domain BM527_11195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_11195 PF03466 LysR substrate binding domain BM527_11210 PF01022 Bacterial regulatory protein, arsR family BM527_11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_11220 PF03466 LysR substrate binding domain BM527_11225 PF06055 Exopolysaccharide synthesis, ExoD BM527_11230 PF00158 Sigma-54 interaction domain BM527_11230 PF02954 Bacterial regulatory protein, Fis family BM527_11230 PF00072 Response regulator receiver domain BM527_11240 PF00360 Phytochrome region BM527_11240 PF00512 His Kinase A (phospho-acceptor) domain BM527_11240 PF01590 GAF domain BM527_11240 PF08446 PAS fold BM527_11240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_11245 PF00072 Response regulator receiver domain BM527_11250 PF18415 Histidine kinase receptor ArcB trans-membrane domain BM527_11250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_11250 PF00989 PAS fold BM527_11250 PF00512 His Kinase A (phospho-acceptor) domain BM527_11250 PF00072 Response regulator receiver domain BM527_11250 PF01627 Hpt domain BM527_11285 PF07043 Protein of unknown function (DUF1328) BM527_11305 PF07023 Protein of unknown function (DUF1315) BM527_11315 PF01235 Sodium:alanine symporter family BM527_11320 PF00246 Zinc carboxypeptidase BM527_11320 PF18027 Cytosolic carboxypeptidase N-terminal domain BM527_11325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM527_11325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BM527_11335 PF01641 SelR domain BM527_11340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BM527_11340 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BM527_11345 PF00128 Alpha amylase, catalytic domain BM527_11345 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BM527_11350 PF02806 Alpha amylase, C-terminal all-beta domain BM527_11350 PF00128 Alpha amylase, catalytic domain BM527_11350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BM527_11355 PF02446 4-alpha-glucanotransferase BM527_11360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM527_11360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BM527_11365 PF01263 Aldose 1-epimerase BM527_11370 PF01081 KDPG and KHG aldolase BM527_11375 PF02685 Glucokinase BM527_11380 PF00920 Dehydratase family BM527_11385 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BM527_11390 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BM527_11390 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BM527_11395 PF01418 Helix-turn-helix domain, rpiR family BM527_11395 PF01380 SIS domain BM527_11400 PF02887 Pyruvate kinase, alpha/beta domain BM527_11400 PF00224 Pyruvate kinase, barrel domain BM527_11410 PF04972 BON domain BM527_11440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_11440 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM527_11440 PF00072 Response regulator receiver domain BM527_11440 PF01627 Hpt domain BM527_11440 PF00512 His Kinase A (phospho-acceptor) domain BM527_11440 PF00672 HAMP domain BM527_11455 PF04231 Endonuclease I BM527_11465 PF02743 Cache domain BM527_11465 PF00672 HAMP domain BM527_11465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_11480 PF03466 LysR substrate binding domain BM527_11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_11490 PF00465 Iron-containing alcohol dehydrogenase BM527_11495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM527_11500 PF08448 PAS fold BM527_11500 PF08447 PAS fold BM527_11500 PF00990 Diguanylate cyclase, GGDEF domain BM527_11500 PF00563 EAL domain BM527_11510 PF06628 Catalase-related immune-responsive BM527_11510 PF00199 Catalase BM527_11515 PF11849 Domain of unknown function (DUF3369) BM527_11520 PF00512 His Kinase A (phospho-acceptor) domain BM527_11520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_11520 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM527_11525 PF12697 Alpha/beta hydrolase family BM527_11535 PF00939 Sodium:sulfate symporter transmembrane region BM527_11540 PF00692 dUTPase BM527_11545 PF10609 NUBPL iron-transfer P-loop NTPase BM527_11550 PF08264 Anticodon-binding domain of tRNA BM527_11550 PF01588 Putative tRNA binding domain BM527_11550 PF09334 tRNA synthetases class I (M) BM527_11555 PF08241 Methyltransferase domain BM527_11565 PF01464 Transglycosylase SLT domain BM527_11565 PF01476 LysM domain BM527_11580 PF04958 Arginine N-succinyltransferase beta subunit BM527_11585 PF09190 DALR domain BM527_11585 PF01406 tRNA synthetases class I (C) catalytic domain BM527_11590 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BM527_11595 PF00149 Calcineurin-like phosphoesterase BM527_11600 PF00245 Alkaline phosphatase BM527_11605 PF00245 Alkaline phosphatase BM527_11615 PF07290 Protein of unknown function (DUF1449) BM527_11620 PF01145 SPFH domain / Band 7 family BM527_11620 PF15975 Flotillin BM527_11625 PF00128 Alpha amylase, catalytic domain BM527_11630 PF01638 HxlR-like helix-turn-helix BM527_11635 PF08240 Alcohol dehydrogenase GroES-like domain BM527_11635 PF00107 Zinc-binding dehydrogenase BM527_11640 PF00107 Zinc-binding dehydrogenase BM527_11640 PF08240 Alcohol dehydrogenase GroES-like domain BM527_11645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_11645 PF03466 LysR substrate binding domain BM527_11660 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BM527_11670 PF00156 Phosphoribosyl transferase domain BM527_11675 PF02674 Colicin V production protein BM527_11680 PF05036 Sporulation related domain BM527_11685 PF08245 Mur ligase middle domain BM527_11685 PF02875 Mur ligase family, glutamate ligase domain BM527_11690 PF17848 Acetyl-coA carboxylase zinc finger domain BM527_11690 PF01039 Carboxyl transferase domain BM527_11700 PF01416 tRNA pseudouridine synthase BM527_11710 PF02774 Semialdehyde dehydrogenase, dimerisation domain BM527_11710 PF01118 Semialdehyde dehydrogenase, NAD binding domain BM527_11715 PF11890 Domain of unknown function (DUF3410) BM527_11715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM527_11715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM527_11720 PF00596 Class II Aldolase and Adducin N-terminal domain BM527_11735 PF02801 Beta-ketoacyl synthase, C-terminal domain BM527_11735 PF00109 Beta-ketoacyl synthase, N-terminal domain BM527_11745 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BM527_11745 PF01266 FAD dependent oxidoreductase BM527_11780 PF00107 Zinc-binding dehydrogenase BM527_11780 PF08240 Alcohol dehydrogenase GroES-like domain BM527_11785 PF00005 ABC transporter BM527_11795 PF02667 Short chain fatty acid transporter BM527_11800 PF00072 Response regulator receiver domain BM527_11800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_11800 PF00672 HAMP domain BM527_11800 PF00512 His Kinase A (phospho-acceptor) domain BM527_11800 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM527_11800 PF01627 Hpt domain BM527_11805 PF02627 Carboxymuconolactone decarboxylase family BM527_11810 PF05193 Peptidase M16 inactive domain BM527_11810 PF00675 Insulinase (Peptidase family M16) BM527_11825 PF04315 Elongation factor P hydroxylase BM527_11850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM527_11850 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM527_11855 PF00378 Enoyl-CoA hydratase/isomerase BM527_11860 PF02909 Tetracyclin repressor-like, C-terminal domain BM527_11860 PF00440 Bacterial regulatory proteins, tetR family BM527_11865 PF00732 GMC oxidoreductase BM527_11865 PF05199 GMC oxidoreductase BM527_11875 PF06974 Protein of unknown function (DUF1298) BM527_11875 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain BM527_11885 PF04286 Protein of unknown function (DUF445) BM527_11910 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BM527_11910 PF00326 Prolyl oligopeptidase family BM527_11915 PF00392 Bacterial regulatory proteins, gntR family BM527_11915 PF07840 FadR C-terminal domain BM527_11920 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BM527_11925 PF02600 Disulfide bond formation protein DsbB BM527_11930 PF13302 Acetyltransferase (GNAT) domain BM527_11940 PF03692 Putative zinc- or iron-chelating domain BM527_11945 PF01557 Fumarylacetoacetate (FAA) hydrolase family BM527_11955 PF05166 YcgL domain BM527_11960 PF00570 HRDC domain BM527_11960 PF01612 3'-5' exonuclease BM527_11965 PF13193 AMP-binding enzyme C-terminal domain BM527_11965 PF00501 AMP-binding enzyme BM527_11970 PF12697 Alpha/beta hydrolase family BM527_11985 PF00814 Glycoprotease family BM527_11990 PF13307 Helicase C-terminal domain BM527_11990 PF06733 DEAD_2 BM527_12035 PF00128 Alpha amylase, catalytic domain BM527_12060 PF00753 Metallo-beta-lactamase superfamily BM527_12060 PF16123 Hydroxyacylglutathione hydrolase C-terminus BM527_12065 PF00593 TonB dependent receptor BM527_12065 PF07715 TonB-dependent Receptor Plug Domain BM527_12070 PF13614 AAA domain BM527_12080 PF08029 HisG, C-terminal domain BM527_12080 PF01634 ATP phosphoribosyltransferase BM527_12085 PF00815 Histidinol dehydrogenase BM527_12090 PF00155 Aminotransferase class I and II BM527_12095 PF00475 Imidazoleglycerol-phosphate dehydratase BM527_12100 PF00117 Glutamine amidotransferase class-I BM527_12105 PF00977 Histidine biosynthesis protein BM527_12110 PF00977 Histidine biosynthesis protein BM527_12115 PF01502 Phosphoribosyl-AMP cyclohydrolase BM527_12115 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BM527_12125 PF01226 Formate/nitrite transporter BM527_12130 PF00672 HAMP domain BM527_12130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_12135 PF05193 Peptidase M16 inactive domain BM527_12135 PF00675 Insulinase (Peptidase family M16) BM527_12140 PF10502 Signal peptidase, peptidase S26 BM527_12150 PF00593 TonB dependent receptor BM527_12150 PF07715 TonB-dependent Receptor Plug Domain BM527_12170 PF05191 Adenylate kinase, active site lid BM527_12175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_12175 PF00183 Hsp90 protein BM527_12180 PF02132 RecR protein BM527_12180 PF13662 Toprim domain BM527_12190 PF00563 EAL domain BM527_12190 PF00990 Diguanylate cyclase, GGDEF domain BM527_12190 PF13426 PAS domain BM527_12195 PF08446 PAS fold BM527_12195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_12195 PF00360 Phytochrome region BM527_12195 PF00512 His Kinase A (phospho-acceptor) domain BM527_12195 PF01590 GAF domain BM527_12205 PF00970 Oxidoreductase FAD-binding domain BM527_12205 PF00175 Oxidoreductase NAD-binding domain BM527_12210 PF02575 YbaB/EbfC DNA-binding family BM527_12215 PF12169 DNA polymerase III subunits gamma and tau domain III BM527_12215 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BM527_12215 PF12170 DNA polymerase III tau subunit V interacting with alpha BM527_12220 PF00156 Phosphoribosyl transferase domain BM527_12230 PF05114 Protein of unknown function (DUF692) BM527_12265 PF01066 CDP-alcohol phosphatidyltransferase BM527_12285 PF01565 FAD binding domain BM527_12285 PF09330 D-lactate dehydrogenase, membrane binding BM527_12290 PF00004 ATPase family associated with various cellular activities (AAA) BM527_12290 PF02861 Clp amino terminal domain, pathogenicity island component BM527_12290 PF17871 AAA lid domain BM527_12290 PF07724 AAA domain (Cdc48 subfamily) BM527_12290 PF10431 C-terminal, D2-small domain, of ClpB protein BM527_12300 PF00849 RNA pseudouridylate synthase BM527_12300 PF01479 S4 domain BM527_12305 PF13525 Outer membrane lipoprotein BM527_12315 PF04545 Sigma-70, region 4 BM527_12315 PF04542 Sigma-70 region 2 BM527_12330 PF00106 short chain dehydrogenase BM527_12350 PF13677 Membrane MotB of proton-channel complex MotA/MotB BM527_12350 PF00691 OmpA family BM527_12355 PF01618 MotA/TolQ/ExbB proton channel family BM527_12360 PF02609 Exonuclease VII small subunit BM527_12365 PF00348 Polyprenyl synthetase BM527_12370 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BM527_12370 PF02780 Transketolase, C-terminal domain BM527_12370 PF02779 Transketolase, pyrimidine binding domain BM527_12375 PF04608 Phosphatidylglycerophosphatase A BM527_12380 PF02769 AIR synthase related protein, C-terminal domain BM527_12380 PF00586 AIR synthase related protein, N-terminal domain BM527_12385 PF01029 NusB family BM527_12390 PF00885 6,7-dimethyl-8-ribityllumazine synthase BM527_12395 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BM527_12395 PF00925 GTP cyclohydrolase II BM527_12400 PF00677 Lumazine binding domain BM527_12405 PF01872 RibD C-terminal domain BM527_12405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BM527_12410 PF03477 ATP cone domain BM527_12415 PF00464 Serine hydroxymethyltransferase BM527_12420 PF00132 Bacterial transferase hexapeptide (six repeats) BM527_12420 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BM527_12425 PF12848 ABC transporter BM527_12425 PF00005 ABC transporter BM527_12435 PF18073 Rubredoxin metal binding domain BM527_12445 PF18429 Domain of unknown function (DUF5609) BM527_12455 PF01026 TatD related DNase BM527_12460 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BM527_12460 PF01243 Pyridoxamine 5'-phosphate oxidase BM527_12465 PF07650 KH domain BM527_12465 PF01926 50S ribosome-binding GTPase BM527_12470 PF00035 Double-stranded RNA binding motif BM527_12470 PF14622 Ribonuclease-III-like BM527_12475 PF10502 Signal peptidase, peptidase S26 BM527_12480 PF00679 Elongation factor G C-terminus BM527_12480 PF00009 Elongation factor Tu GTP binding domain BM527_12480 PF03144 Elongation factor Tu domain 2 BM527_12480 PF06421 GTP-binding protein LepA C-terminus BM527_12490 PF17188 MucB/RseB C-terminal domain BM527_12490 PF03888 MucB/RseB N-terminal domain BM527_12500 PF04542 Sigma-70 region 2 BM527_12500 PF08281 Sigma-70, region 4 BM527_12505 PF00890 FAD binding domain BM527_12505 PF02910 Fumarate reductase flavoprotein C-term BM527_12520 PF03937 Flavinator of succinate dehydrogenase BM527_12530 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM527_12535 PF00543 Nitrogen regulatory protein P-II BM527_12540 PF02540 NAD synthase BM527_12550 PF07963 Prokaryotic N-terminal methylation motif BM527_12550 PF00114 Pilin (bacterial filament) BM527_12575 PF07963 Prokaryotic N-terminal methylation motif BM527_12575 PF00114 Pilin (bacterial filament) BM527_12600 PF02401 LytB protein BM527_12605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM527_12610 PF01252 Signal peptidase (SPase) II BM527_12615 PF06827 Zinc finger found in FPG and IleRS BM527_12615 PF00133 tRNA synthetases class I (I, L, M and V) BM527_12615 PF08264 Anticodon-binding domain of tRNA BM527_12620 PF06574 FAD synthetase BM527_12620 PF01687 Riboflavin kinase BM527_12625 PF03023 Lipid II flippase MurJ BM527_12630 PF01649 Ribosomal protein S20 BM527_12635 PF00106 short chain dehydrogenase BM527_12645 PF00106 short chain dehydrogenase BM527_12660 PF01546 Peptidase family M20/M25/M40 BM527_12660 PF07687 Peptidase dimerisation domain BM527_12665 PF13145 PPIC-type PPIASE domain BM527_12670 PF00722 Glycosyl hydrolases family 16 BM527_12675 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BM527_12675 PF14490 Helix-hairpin-helix containing domain BM527_12675 PF13538 UvrD-like helicase C-terminal domain BM527_12705 PF00216 Bacterial DNA-binding protein BM527_12710 PF00004 ATPase family associated with various cellular activities (AAA) BM527_12710 PF05362 Lon protease (S16) C-terminal proteolytic domain BM527_12710 PF02190 ATP-dependent protease La (LON) substrate-binding domain BM527_12715 PF10431 C-terminal, D2-small domain, of ClpB protein BM527_12715 PF07724 AAA domain (Cdc48 subfamily) BM527_12715 PF06689 ClpX C4-type zinc finger BM527_12720 PF00574 Clp protease BM527_12725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM527_12725 PF05698 Bacterial trigger factor protein (TF) C-terminus BM527_12725 PF05697 Bacterial trigger factor protein (TF) BM527_12735 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BM527_12735 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BM527_12745 PF18389 TrmO C-terminal domain BM527_12745 PF01980 tRNA-methyltransferase O BM527_12750 PF03129 Anticodon binding domain BM527_12750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BM527_12755 PF00753 Metallo-beta-lactamase superfamily BM527_12755 PF12706 Beta-lactamase superfamily domain BM527_12760 PF02253 Phospholipase A1 BM527_12765 PF00850 Histone deacetylase domain BM527_12770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_12770 PF00672 HAMP domain BM527_12770 PF02743 Cache domain BM527_12775 PF02540 NAD synthase BM527_12775 PF00958 GMP synthase C terminal domain BM527_12775 PF00117 Glutamine amidotransferase class-I BM527_12780 PF00478 IMP dehydrogenase / GMP reductase domain BM527_12780 PF00571 CBS domain BM527_12785 PF13742 OB-fold nucleic acid binding domain BM527_12785 PF02601 Exonuclease VII, large subunit BM527_12795 PF01926 50S ribosome-binding GTPase BM527_12795 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BM527_12800 PF13360 PQQ-like domain BM527_12805 PF09976 Tetratricopeptide repeat-like domain BM527_12810 PF03129 Anticodon binding domain BM527_12810 PF13393 Histidyl-tRNA synthetase BM527_12815 PF04551 GcpE protein BM527_12820 PF13464 Domain of unknown function (DUF4115) BM527_12830 PF04055 Radical SAM superfamily BM527_12835 PF00334 Nucleoside diphosphate kinase BM527_12840 PF02657 Fe-S metabolism associated domain BM527_12845 PF01883 Iron-sulfur cluster assembly protein BM527_12850 PF01521 Iron-sulphur cluster biosynthesis BM527_12855 PF00266 Aminotransferase class-V BM527_12860 PF01458 Uncharacterized protein family (UPF0051) BM527_12865 PF00005 ABC transporter BM527_12870 PF01458 Uncharacterized protein family (UPF0051) BM527_12875 PF00266 Aminotransferase class-V BM527_12880 PF02082 Transcriptional regulator BM527_12885 PF00561 alpha/beta hydrolase fold BM527_12890 PF00743 Flavin-binding monooxygenase-like BM527_12895 PF01037 Lrp/AsnC ligand binding domain BM527_12900 PF14850 DNA-binding domain of Proline dehydrogenase BM527_12900 PF01619 Proline dehydrogenase BM527_12900 PF00171 Aldehyde dehydrogenase family BM527_12900 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BM527_12910 PF00474 Sodium:solute symporter family BM527_12915 PF06426 Serine acetyltransferase, N-terminal BM527_12915 PF00132 Bacterial transferase hexapeptide (six repeats) BM527_12920 PF00588 SpoU rRNA Methylase family BM527_12925 PF00459 Inositol monophosphatase family BM527_12930 PF07549 SecD/SecF GG Motif BM527_12930 PF02355 Protein export membrane protein BM527_12935 PF07549 SecD/SecF GG Motif BM527_12935 PF13721 SecD export protein N-terminal TM region BM527_12935 PF02355 Protein export membrane protein BM527_12940 PF02699 Preprotein translocase subunit BM527_12945 PF01702 Queuine tRNA-ribosyltransferase BM527_12950 PF02547 Queuosine biosynthesis protein BM527_12965 PF04012 PspA/IM30 family BM527_12970 PF07885 Ion channel BM527_12985 PF06693 Protein of unknown function (DUF1190) BM527_12990 PF03738 Glutathionylspermidine synthase preATP-grasp BM527_13005 PF00005 ABC transporter BM527_13020 PF04960 Glutaminase BM527_13025 PF00245 Alkaline phosphatase BM527_13030 PF00072 Response regulator receiver domain BM527_13035 PF00463 Isocitrate lyase family BM527_13040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_13040 PF03466 LysR substrate binding domain BM527_13045 PF01274 Malate synthase BM527_13055 PF01370 NAD dependent epimerase/dehydratase family BM527_13100 PF05717 IS66 Orf2 like protein BM527_13160 PF13439 Glycosyltransferase Family 4 BM527_13160 PF00534 Glycosyl transferases group 1 BM527_13175 PF00733 Asparagine synthase BM527_13175 PF13537 Glutamine amidotransferase domain BM527_13185 PF00534 Glycosyl transferases group 1 BM527_13185 PF13439 Glycosyltransferase Family 4 BM527_13195 PF01757 Acyltransferase family BM527_13200 PF04230 Polysaccharide pyruvyl transferase BM527_13215 PF00535 Glycosyl transferase family 2 BM527_13220 PF13477 Glycosyl transferase 4-like BM527_13220 PF00534 Glycosyl transferases group 1 BM527_13225 PF03062 MBOAT, membrane-bound O-acyltransferase family BM527_13255 PF01522 Polysaccharide deacetylase BM527_13260 PF02397 Bacterial sugar transferase BM527_13275 PF13614 AAA domain BM527_13285 PF13401 AAA domain BM527_13285 PF01471 Putative peptidoglycan binding domain BM527_13290 PF01467 Cytidylyltransferase-like BM527_13290 PF00294 pfkB family carbohydrate kinase BM527_13295 PF01541 GIY-YIG catalytic domain BM527_13305 PF08335 GlnD PII-uridylyltransferase BM527_13305 PF03710 Glutamate-ammonia ligase adenylyltransferase BM527_13315 PF03279 Bacterial lipid A biosynthesis acyltransferase BM527_13330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM527_13330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BM527_13330 PF02770 Acyl-CoA dehydrogenase, middle domain BM527_13330 PF09317 Domain of unknown function (DUF1974) BM527_13345 PF00563 EAL domain BM527_13345 PF00990 Diguanylate cyclase, GGDEF domain BM527_13345 PF03707 Bacterial signalling protein N terminal repeat BM527_13350 PF00265 Thymidine kinase BM527_13355 PF00356 Bacterial regulatory proteins, lacI family BM527_13375 PF01926 50S ribosome-binding GTPase BM527_13380 PF08032 RNA 2'-O ribose methyltransferase substrate binding BM527_13380 PF00588 SpoU rRNA Methylase family BM527_13415 PF00171 Aldehyde dehydrogenase family BM527_13420 PF05199 GMC oxidoreductase BM527_13420 PF00732 GMC oxidoreductase BM527_13435 PF00990 Diguanylate cyclase, GGDEF domain BM527_13435 PF05230 MASE2 domain BM527_13445 PF05971 RNA methyltransferase BM527_13475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BM527_13475 PF18158 Adaptive response protein AidB N-terminal domain BM527_13475 PF02770 Acyl-CoA dehydrogenase, middle domain BM527_13480 PF00990 Diguanylate cyclase, GGDEF domain BM527_13505 PF03965 Penicillinase repressor BM527_13525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM527_13535 PF01799 [2Fe-2S] binding domain BM527_13535 PF00111 2Fe-2S iron-sulfur cluster binding domain BM527_13540 PF03450 CO dehydrogenase flavoprotein C-terminal domain BM527_13540 PF00941 FAD binding domain in molybdopterin dehydrogenase BM527_13545 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM527_13545 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BM527_13550 PF01738 Dienelactone hydrolase family BM527_13560 PF00593 TonB dependent receptor BM527_13560 PF07715 TonB-dependent Receptor Plug Domain BM527_13570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BM527_13575 PF00528 Binding-protein-dependent transport system inner membrane component BM527_13580 PF12911 N-terminal TM domain of oligopeptide transport permease C BM527_13580 PF00528 Binding-protein-dependent transport system inner membrane component BM527_13585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BM527_13585 PF00005 ABC transporter BM527_13600 PF00106 short chain dehydrogenase BM527_13605 PF01965 DJ-1/PfpI family BM527_13610 PF03631 Virulence factor BrkB BM527_13615 PF07690 Major Facilitator Superfamily BM527_13650 PF07152 YaeQ protein BM527_13680 PF07690 Major Facilitator Superfamily BM527_13685 PF00696 Amino acid kinase family BM527_13685 PF00583 Acetyltransferase (GNAT) family BM527_13690 PF06827 Zinc finger found in FPG and IleRS BM527_13690 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BM527_13690 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BM527_13715 PF00570 HRDC domain BM527_13715 PF09382 RQC domain BM527_13715 PF00270 DEAD/DEAH box helicase BM527_13715 PF00271 Helicase conserved C-terminal domain BM527_13715 PF16124 RecQ zinc-binding BM527_13735 PF00672 HAMP domain BM527_13735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_13735 PF00512 His Kinase A (phospho-acceptor) domain BM527_13735 PF01627 Hpt domain BM527_13735 PF00072 Response regulator receiver domain BM527_13735 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM527_13745 PF01590 GAF domain BM527_13745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_13745 PF00512 His Kinase A (phospho-acceptor) domain BM527_13745 PF08446 PAS fold BM527_13745 PF00360 Phytochrome region BM527_13750 PF07995 Glucose / Sorbosone dehydrogenase BM527_13770 PF00211 Adenylate and Guanylate cyclase catalytic domain BM527_13790 PF00561 alpha/beta hydrolase fold BM527_13810 PF06463 Molybdenum Cofactor Synthesis C BM527_13810 PF04055 Radical SAM superfamily BM527_13835 PF01597 Glycine cleavage H-protein BM527_13840 PF01571 Aminomethyltransferase folate-binding domain BM527_13840 PF08669 Glycine cleavage T-protein C-terminal barrel domain BM527_13845 PF07690 Major Facilitator Superfamily BM527_13850 PF01979 Amidohydrolase family BM527_13855 PF01380 SIS domain BM527_13860 PF01869 BadF/BadG/BcrA/BcrD ATPase family BM527_13865 PF02838 Glycosyl hydrolase family 20, domain 2 BM527_13865 PF00728 Glycosyl hydrolase family 20, catalytic domain BM527_13865 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BM527_13865 PF03173 Putative carbohydrate binding domain BM527_13875 PF00356 Bacterial regulatory proteins, lacI family BM527_13880 PF04820 Tryptophan halogenase BM527_13885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_13885 PF03466 LysR substrate binding domain BM527_13900 PF01494 FAD binding domain BM527_13905 PF01494 FAD binding domain BM527_13910 PF00557 Metallopeptidase family M24 BM527_13910 PF05195 Aminopeptidase P, N-terminal domain BM527_13915 PF03695 Uncharacterised protein family (UPF0149) BM527_13925 PF00294 pfkB family carbohydrate kinase BM527_13930 PF01156 Inosine-uridine preferring nucleoside hydrolase BM527_13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_13935 PF00072 Response regulator receiver domain BM527_13935 PF00989 PAS fold BM527_13935 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM527_13935 PF00512 His Kinase A (phospho-acceptor) domain BM527_13935 PF01627 Hpt domain BM527_13940 PF01812 5-formyltetrahydrofolate cyclo-ligase family BM527_13945 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BM527_13950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM527_13950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM527_13950 PF01842 ACT domain BM527_13970 PF06945 Protein of unknown function (DUF1289) BM527_13980 PF00873 AcrB/AcrD/AcrF family BM527_13985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM527_13990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_13990 PF03466 LysR substrate binding domain BM527_13995 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM527_13995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM527_14000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BM527_14000 PF02817 e3 binding domain BM527_14000 PF00364 Biotin-requiring enzyme BM527_14005 PF17831 Pyruvate dehydrogenase E1 component middle domain BM527_14005 PF00456 Transketolase, thiamine diphosphate binding domain BM527_14010 PF00392 Bacterial regulatory proteins, gntR family BM527_14010 PF07729 FCD domain BM527_14020 PF01510 N-acetylmuramoyl-L-alanine amidase BM527_14030 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BM527_14030 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BM527_14040 PF00482 Type II secretion system (T2SS), protein F BM527_14045 PF06750 Bacterial Peptidase A24 N-terminal domain BM527_14045 PF01478 Type IV leader peptidase family BM527_14050 PF01121 Dephospho-CoA kinase BM527_14055 PF07072 Cell division protein BM527_14065 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BM527_14070 PF02743 Cache domain BM527_14070 PF00672 HAMP domain BM527_14070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_14075 PF00072 Response regulator receiver domain BM527_14075 PF00196 Bacterial regulatory proteins, luxR family BM527_14080 PF13614 AAA domain BM527_14090 PF02895 Signal transducing histidine kinase, homodimeric domain BM527_14090 PF01584 CheW-like domain BM527_14090 PF07194 P2 response regulator binding domain BM527_14090 PF01627 Hpt domain BM527_14090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_14095 PF00072 Response regulator receiver domain BM527_14100 PF03705 CheR methyltransferase, all-alpha domain BM527_14100 PF01739 CheR methyltransferase, SAM binding domain BM527_14110 PF01339 CheB methylesterase BM527_14110 PF00072 Response regulator receiver domain BM527_14115 PF01584 CheW-like domain BM527_14120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_14120 PF02743 Cache domain BM527_14120 PF00672 HAMP domain BM527_14125 PF00293 NUDIX domain BM527_14130 PF07517 SecA DEAD-like domain BM527_14130 PF07516 SecA Wing and Scaffold domain BM527_14130 PF02810 SEC-C motif BM527_14130 PF01043 SecA preprotein cross-linking domain BM527_14135 PF01476 LysM domain BM527_14135 PF01551 Peptidase family M23 BM527_14135 PF08525 Opacity-associated protein A N-terminal motif BM527_14140 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BM527_14145 PF00091 Tubulin/FtsZ family, GTPase domain BM527_14145 PF12327 FtsZ family, C-terminal domain BM527_14150 PF02491 SHS2 domain inserted in FTSA BM527_14155 PF08478 POTRA domain, FtsQ-type BM527_14155 PF03799 Cell division protein FtsQ BM527_14160 PF07478 D-ala D-ala ligase C-terminus BM527_14160 PF01820 D-ala D-ala ligase N-terminus BM527_14165 PF08245 Mur ligase middle domain BM527_14165 PF01225 Mur ligase family, catalytic domain BM527_14165 PF02875 Mur ligase family, glutamate ligase domain BM527_14170 PF04101 Glycosyltransferase family 28 C-terminal domain BM527_14170 PF03033 Glycosyltransferase family 28 N-terminal domain BM527_14175 PF01098 Cell cycle protein BM527_14180 PF02875 Mur ligase family, glutamate ligase domain BM527_14180 PF08245 Mur ligase middle domain BM527_14185 PF00953 Glycosyl transferase family 4 BM527_14185 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BM527_14190 PF02875 Mur ligase family, glutamate ligase domain BM527_14190 PF01225 Mur ligase family, catalytic domain BM527_14190 PF08245 Mur ligase middle domain BM527_14195 PF08245 Mur ligase middle domain BM527_14195 PF01225 Mur ligase family, catalytic domain BM527_14195 PF02875 Mur ligase family, glutamate ligase domain BM527_14200 PF00905 Penicillin binding protein transpeptidase domain BM527_14200 PF03717 Penicillin-binding Protein dimerisation domain BM527_14205 PF04999 Cell division protein FtsL BM527_14210 PF01795 MraW methylase family BM527_14215 PF02381 MraZ protein, putative antitoxin-like BM527_14235 PF00873 AcrB/AcrD/AcrF family BM527_14240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BM527_14260 PF08534 Redoxin BM527_14260 PF00462 Glutaredoxin BM527_14265 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BM527_14275 PF00990 Diguanylate cyclase, GGDEF domain BM527_14275 PF17158 Membrane-associated sensor, integral membrane domain BM527_14285 PF02954 Bacterial regulatory protein, Fis family BM527_14285 PF00158 Sigma-54 interaction domain BM527_14285 PF00072 Response regulator receiver domain BM527_14290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_14290 PF00512 His Kinase A (phospho-acceptor) domain BM527_14290 PF09456 RcsC Alpha-Beta-Loop (ABL) BM527_14290 PF00072 Response regulator receiver domain BM527_14295 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BM527_14295 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BM527_14310 PF00924 Mechanosensitive ion channel BM527_14310 PF05552 Conserved TM helix BM527_14315 PF04452 RNA methyltransferase BM527_14320 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BM527_14320 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BM527_14325 PF02622 Uncharacterized ACR, COG1678 BM527_14330 PF03652 Holliday junction resolvase BM527_14340 PF00437 Type II/IV secretion system protein BM527_14345 PF00437 Type II/IV secretion system protein BM527_14350 PF01168 Alanine racemase, N-terminal domain BM527_14355 PF03807 NADP oxidoreductase coenzyme F420-dependent BM527_14355 PF14748 Pyrroline-5-carboxylate reductase dimerisation BM527_14360 PF02325 YGGT family BM527_14370 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM527_14370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM527_14385 PF02798 Glutathione S-transferase, N-terminal domain BM527_14385 PF14834 Glutathione S-transferase, C-terminal domain BM527_14390 PF00080 Copper/zinc superoxide dismutase (SODC) BM527_14395 PF02566 OsmC-like protein BM527_14400 PF01625 Peptide methionine sulfoxide reductase BM527_14405 PF07690 Major Facilitator Superfamily BM527_14410 PF00722 Glycosyl hydrolases family 16 BM527_14415 PF07715 TonB-dependent Receptor Plug Domain BM527_14425 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BM527_14430 PF03883 Peroxide stress protein YaaA BM527_14435 PF00923 Transaldolase/Fructose-6-phosphate aldolase BM527_14440 PF00342 Phosphoglucose isomerase BM527_14445 PF03167 Uracil DNA glycosylase superfamily BM527_14450 PF14821 Threonine synthase N terminus BM527_14450 PF00291 Pyridoxal-phosphate dependent enzyme BM527_14455 PF08544 GHMP kinases C terminal BM527_14455 PF00288 GHMP kinases N terminal domain BM527_14460 PF00696 Amino acid kinase family BM527_14460 PF13840 ACT domain BM527_14460 PF00742 Homoserine dehydrogenase BM527_14460 PF03447 Homoserine dehydrogenase, NAD binding domain BM527_14460 PF01842 ACT domain BM527_14465 PF17755 UvrA DNA-binding domain BM527_14470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_14470 PF03466 LysR substrate binding domain BM527_14475 PF08240 Alcohol dehydrogenase GroES-like domain BM527_14475 PF00107 Zinc-binding dehydrogenase BM527_14490 PF01022 Bacterial regulatory protein, arsR family BM527_14500 PF03358 NADPH-dependent FMN reductase BM527_14505 PF01758 Sodium Bile acid symporter family BM527_14510 PF00072 Response regulator receiver domain BM527_14515 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BM527_14520 PF00072 Response regulator receiver domain BM527_14520 PF00486 Transcriptional regulatory protein, C terminal BM527_14525 PF00512 His Kinase A (phospho-acceptor) domain BM527_14525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_14525 PF00672 HAMP domain BM527_14540 PF00291 Pyridoxal-phosphate dependent enzyme BM527_14545 PF04116 Fatty acid hydroxylase superfamily BM527_14565 PF03435 Saccharopine dehydrogenase NADP binding domain BM527_14565 PF16653 Saccharopine dehydrogenase C-terminal domain BM527_14570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BM527_14580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BM527_14585 PF04348 LppC putative lipoprotein BM527_14590 PF02021 Uncharacterised protein family UPF0102 BM527_14595 PF13580 SIS domain BM527_14600 PF04972 BON domain BM527_14605 PF07690 Major Facilitator Superfamily BM527_14615 PF00893 Small Multidrug Resistance protein BM527_14620 PF07730 Histidine kinase BM527_14625 PF00196 Bacterial regulatory proteins, luxR family BM527_14625 PF00072 Response regulator receiver domain BM527_14640 PF00593 TonB dependent receptor BM527_14640 PF07715 TonB-dependent Receptor Plug Domain BM527_14655 PF00285 Citrate synthase, C-terminal domain BM527_14660 PF00330 Aconitase family (aconitate hydratase) BM527_14660 PF00694 Aconitase C-terminal domain BM527_14665 PF04303 PrpF protein BM527_14670 PF00990 Diguanylate cyclase, GGDEF domain BM527_14675 PF00474 Sodium:solute symporter family BM527_14690 PF00512 His Kinase A (phospho-acceptor) domain BM527_14690 PF01627 Hpt domain BM527_14690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_14690 PF00072 Response regulator receiver domain BM527_14690 PF18415 Histidine kinase receptor ArcB trans-membrane domain BM527_14690 PF00989 PAS fold BM527_14695 PF01510 N-acetylmuramoyl-L-alanine amidase BM527_14700 PF01493 GXGXG motif BM527_14700 PF00310 Glutamine amidotransferases class-II BM527_14700 PF01645 Conserved region in glutamate synthase BM527_14700 PF04898 Glutamate synthase central domain BM527_14705 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM527_14705 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BM527_14725 PF01048 Phosphorylase superfamily BM527_14730 PF03186 CobD/Cbib protein BM527_14735 PF01497 Periplasmic binding protein BM527_14755 PF01266 FAD dependent oxidoreductase BM527_14760 PF07237 Protein of unknown function (DUF1428) BM527_14780 PF00579 tRNA synthetases class I (W and Y) BM527_14785 PF01464 Transglycosylase SLT domain BM527_14785 PF10145 Phage-related minor tail protein BM527_14785 PF01551 Peptidase family M23 BM527_14790 PF03702 Anhydro-N-acetylmuramic acid kinase BM527_14795 PF07690 Major Facilitator Superfamily BM527_14805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BM527_14815 PF01053 Cys/Met metabolism PLP-dependent enzyme BM527_14820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM527_14820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM527_14825 PF00043 Glutathione S-transferase, C-terminal domain BM527_14825 PF13417 Glutathione S-transferase, N-terminal domain BM527_14830 PF01521 Iron-sulphur cluster biosynthesis BM527_14835 PF03976 Polyphosphate kinase 2 (PPK2) BM527_14840 PF03776 Septum formation topological specificity factor MinE BM527_14845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BM527_14850 PF05209 Septum formation inhibitor MinC, N-terminal domain BM527_14850 PF03775 Septum formation inhibitor MinC, C-terminal domain BM527_14855 PF00206 Lyase BM527_14855 PF10415 Fumarase C C-terminus BM527_14860 PF00127 Copper binding proteins, plastocyanin/azurin family BM527_14890 PF01566 Natural resistance-associated macrophage protein BM527_14895 PF00155 Aminotransferase class I and II BM527_14910 PF03951 Glutamine synthetase, beta-Grasp domain BM527_14910 PF00120 Glutamine synthetase, catalytic domain BM527_14920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_14920 PF00512 His Kinase A (phospho-acceptor) domain BM527_14920 PF00989 PAS fold BM527_14925 PF00158 Sigma-54 interaction domain BM527_14925 PF02954 Bacterial regulatory protein, Fis family BM527_14925 PF00072 Response regulator receiver domain BM527_14930 PF00072 Response regulator receiver domain BM527_14935 PF01553 Acyltransferase BM527_14940 PF06877 Regulator of ribonuclease activity B BM527_14955 PF00072 Response regulator receiver domain BM527_14955 PF00672 HAMP domain BM527_14955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_14955 PF00512 His Kinase A (phospho-acceptor) domain BM527_14955 PF01627 Hpt domain BM527_14955 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BM527_14960 PF00133 tRNA synthetases class I (I, L, M and V) BM527_14960 PF10458 Valyl tRNA synthetase tRNA binding arm BM527_14960 PF08264 Anticodon-binding domain of tRNA BM527_14965 PF04364 DNA polymerase III chi subunit, HolC BM527_14970 PF00883 Cytosol aminopeptidase family, catalytic domain BM527_14970 PF02789 Cytosol aminopeptidase family, N-terminal domain BM527_14975 PF03739 Lipopolysaccharide export system permease LptF/LptG BM527_14980 PF03739 Lipopolysaccharide export system permease LptF/LptG BM527_14995 PF04542 Sigma-70 region 2 BM527_14995 PF04545 Sigma-70, region 4 BM527_15050 PF00271 Helicase conserved C-terminal domain BM527_15050 PF00176 SNF2 family N-terminal domain BM527_15065 PF01751 Toprim domain BM527_15065 PF01131 DNA topoisomerase BM527_15065 PF01396 Topoisomerase DNA binding C4 zinc finger BM527_15090 PF17862 AAA+ lid domain BM527_15090 PF00004 ATPase family associated with various cellular activities (AAA) BM527_15090 PF01434 Peptidase family M41 BM527_15095 PF02899 Phage integrase, N-terminal SAM-like domain BM527_15095 PF00589 Phage integrase family BM527_15115 PF13361 UvrD-like helicase C-terminal domain BM527_15115 PF00580 UvrD/REP helicase N-terminal domain BM527_15145 PF14508 Glycosyl-hydrolase 97 N-terminal BM527_15145 PF10566 Glycoside hydrolase 97 BM527_15145 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BM527_15160 PF04820 Tryptophan halogenase BM527_15210 PF04542 Sigma-70 region 2 BM527_15210 PF08281 Sigma-70, region 4 BM527_15230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BM527_15230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BM527_15235 PF00512 His Kinase A (phospho-acceptor) domain BM527_15235 PF00072 Response regulator receiver domain BM527_15235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_15235 PF00497 Bacterial extracellular solute-binding proteins, family 3 BM527_15235 PF01627 Hpt domain BM527_15240 PF01594 AI-2E family transporter BM527_15250 PF00892 EamA-like transporter family BM527_15265 PF00593 TonB dependent receptor BM527_15265 PF07715 TonB-dependent Receptor Plug Domain BM527_15290 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BM527_15290 PF10996 Beta-Casp domain BM527_15290 PF00753 Metallo-beta-lactamase superfamily BM527_15300 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BM527_15305 PF01321 Creatinase/Prolidase N-terminal domain BM527_15305 PF00557 Metallopeptidase family M24 BM527_15310 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BM527_15310 PF05221 S-adenosyl-L-homocysteine hydrolase BM527_15315 PF00990 Diguanylate cyclase, GGDEF domain BM527_15315 PF08448 PAS fold BM527_15325 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BM527_15325 PF13360 PQQ-like domain BM527_15350 PF00005 ABC transporter BM527_15360 PF00883 Cytosol aminopeptidase family, catalytic domain BM527_15360 PF02789 Cytosol aminopeptidase family, N-terminal domain BM527_15365 PF12706 Beta-lactamase superfamily domain BM527_15370 PF03070 TENA/THI-4/PQQC family BM527_15375 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BM527_15380 PF04055 Radical SAM superfamily BM527_15380 PF13186 Iron-sulfur cluster-binding domain BM527_15405 PF00072 Response regulator receiver domain BM527_15405 PF00196 Bacterial regulatory proteins, luxR family BM527_15410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_15410 PF00512 His Kinase A (phospho-acceptor) domain BM527_15420 PF04205 FMN-binding domain BM527_15420 PF12801 4Fe-4S binding domain BM527_15425 PF00171 Aldehyde dehydrogenase family BM527_15430 PF00072 Response regulator receiver domain BM527_15430 PF00196 Bacterial regulatory proteins, luxR family BM527_15435 PF05231 MASE1 BM527_15435 PF07730 Histidine kinase BM527_15435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_15440 PF03466 LysR substrate binding domain BM527_15445 PF00171 Aldehyde dehydrogenase family BM527_15450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BM527_15450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BM527_15455 PF02028 BCCT, betaine/carnitine/choline family transporter BM527_15460 PF01070 FMN-dependent dehydrogenase BM527_15465 PF01565 FAD binding domain BM527_15465 PF09330 D-lactate dehydrogenase, membrane binding BM527_15470 PF00196 Bacterial regulatory proteins, luxR family BM527_15470 PF00072 Response regulator receiver domain BM527_15475 PF07730 Histidine kinase BM527_15475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_15485 PF00271 Helicase conserved C-terminal domain BM527_15485 PF00270 DEAD/DEAH box helicase BM527_15490 PF00563 EAL domain BM527_15490 PF00990 Diguanylate cyclase, GGDEF domain BM527_15490 PF08447 PAS fold BM527_15490 PF08448 PAS fold BM527_15505 PF12794 Mechanosensitive ion channel inner membrane domain 1 BM527_15505 PF12795 Mechanosensitive ion channel porin domain BM527_15505 PF00924 Mechanosensitive ion channel BM527_15515 PF00141 Peroxidase BM527_15525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_15525 PF00512 His Kinase A (phospho-acceptor) domain BM527_15525 PF00989 PAS fold BM527_15540 PF03466 LysR substrate binding domain BM527_15540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_15550 PF01925 Sulfite exporter TauE/SafE BM527_15555 PF00155 Aminotransferase class I and II BM527_15560 PF00072 Response regulator receiver domain BM527_15560 PF08769 Sporulation initiation factor Spo0A C terminal BM527_15570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_15570 PF00512 His Kinase A (phospho-acceptor) domain BM527_15580 PF03104 DNA polymerase family B, exonuclease domain BM527_15580 PF00136 DNA polymerase family B BM527_15590 PF13193 AMP-binding enzyme C-terminal domain BM527_15590 PF00501 AMP-binding enzyme BM527_15630 PF05958 tRNA (Uracil-5-)-methyltransferase BM527_15635 PF00440 Bacterial regulatory proteins, tetR family BM527_15650 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM527_15650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM527_15660 PF03167 Uracil DNA glycosylase superfamily BM527_15665 PF03707 Bacterial signalling protein N terminal repeat BM527_15665 PF00990 Diguanylate cyclase, GGDEF domain BM527_15665 PF00563 EAL domain BM527_15675 PF01507 Phosphoadenosine phosphosulfate reductase family BM527_15680 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BM527_15680 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BM527_15685 PF00258 Flavodoxin BM527_15685 PF00175 Oxidoreductase NAD-binding domain BM527_15685 PF00667 FAD binding domain BM527_15705 PF04024 PspC domain BM527_15710 PF04012 PspA/IM30 family BM527_15720 PF01207 Dihydrouridine synthase (Dus) BM527_15730 PF00691 OmpA family BM527_15730 PF01389 OmpA-like transmembrane domain BM527_15735 PF00004 ATPase family associated with various cellular activities (AAA) BM527_15735 PF05362 Lon protease (S16) C-terminal proteolytic domain BM527_15735 PF02190 ATP-dependent protease La (LON) substrate-binding domain BM527_15740 PF00563 EAL domain BM527_15740 PF00990 Diguanylate cyclase, GGDEF domain BM527_15740 PF03707 Bacterial signalling protein N terminal repeat BM527_15745 PF00756 Putative esterase BM527_15750 PF01553 Acyltransferase BM527_15755 PF01553 Acyltransferase BM527_15760 PF00924 Mechanosensitive ion channel BM527_15775 PF01370 NAD dependent epimerase/dehydratase family BM527_15780 PF00209 Sodium:neurotransmitter symporter family BM527_15795 PF01625 Peptide methionine sulfoxide reductase BM527_15810 PF00258 Flavodoxin BM527_15820 PF02472 Biopolymer transport protein ExbD/TolR BM527_15830 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BM527_15835 PF01270 Glycosyl hydrolases family 8 BM527_15845 PF03170 Bacterial cellulose synthase subunit BM527_15845 PF03552 Cellulose synthase BM527_15845 PF00535 Glycosyl transferase family 2 BM527_15845 PF07238 PilZ domain BM527_15860 PF05175 Methyltransferase small domain BM527_15865 PF13460 NAD(P)H-binding BM527_15870 PF00326 Prolyl oligopeptidase family BM527_15870 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BM527_15875 PF08000 Bacterial PH domain BM527_15880 PF00563 EAL domain BM527_15880 PF00990 Diguanylate cyclase, GGDEF domain BM527_15880 PF08448 PAS fold BM527_15885 PF00291 Pyridoxal-phosphate dependent enzyme BM527_15890 PF07969 Amidohydrolase family BM527_15900 PF00753 Metallo-beta-lactamase superfamily BM527_15910 PF03466 LysR substrate binding domain BM527_15910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_15915 PF13230 Glutamine amidotransferases class-II BM527_15925 PF05360 yiaA/B two helix domain BM527_15945 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BM527_15950 PF07715 TonB-dependent Receptor Plug Domain BM527_15950 PF00593 TonB dependent receptor BM527_15955 PF00171 Aldehyde dehydrogenase family BM527_15960 PF01613 Flavin reductase like domain BM527_15965 PF00881 Nitroreductase family BM527_15970 PF00561 alpha/beta hydrolase fold BM527_15975 PF01042 Endoribonuclease L-PSP BM527_15980 PF00857 Isochorismatase family BM527_15985 PF00296 Luciferase-like monooxygenase BM527_15990 PF08362 YcdC-like protein, C-terminal region BM527_15990 PF00440 Bacterial regulatory proteins, tetR family BM527_16005 PF09905 DNA-binding protein VF530 BM527_16015 PF00753 Metallo-beta-lactamase superfamily BM527_16015 PF16123 Hydroxyacylglutathione hydrolase C-terminus BM527_16025 PF11798 IMS family HHH motif BM527_16025 PF00817 impB/mucB/samB family BM527_16025 PF11799 impB/mucB/samB family C-terminal domain BM527_16045 PF02424 ApbE family BM527_16050 PF00175 Oxidoreductase NAD-binding domain BM527_16050 PF00111 2Fe-2S iron-sulfur cluster binding domain BM527_16050 PF00970 Oxidoreductase FAD-binding domain BM527_16055 PF02508 Rnf-Nqr subunit, membrane protein BM527_16060 PF02508 Rnf-Nqr subunit, membrane protein BM527_16065 PF04205 FMN-binding domain BM527_16070 PF03116 NQR2, RnfD, RnfE family BM527_16075 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BM527_16075 PF11973 NQRA C-terminal domain BM527_16080 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BM527_16080 PF12241 Trans-2-enoyl-CoA reductase catalytic region BM527_16080 PF07055 Enoyl reductase FAD binding domain BM527_16085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM527_16085 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BM527_16090 PF00311 Phosphoenolpyruvate carboxylase BM527_16105 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BM527_16105 PF00056 lactate/malate dehydrogenase, NAD binding domain BM527_16110 PF02863 Arginine repressor, C-terminal domain BM527_16110 PF01316 Arginine repressor, DNA binding domain BM527_16135 PF00485 Phosphoribulokinase / Uridine kinase family BM527_16140 PF07670 Nucleoside recognition BM527_16140 PF01773 Na+ dependent nucleoside transporter N-terminus BM527_16140 PF07662 Na+ dependent nucleoside transporter C-terminus BM527_16155 PF02469 Fasciclin domain BM527_16165 PF00360 Phytochrome region BM527_16165 PF00563 EAL domain BM527_16165 PF00990 Diguanylate cyclase, GGDEF domain BM527_16165 PF01590 GAF domain BM527_16175 PF01380 SIS domain BM527_16175 PF00571 CBS domain BM527_16180 PF00474 Sodium:solute symporter family BM527_16190 PF00072 Response regulator receiver domain BM527_16190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_16190 PF09456 RcsC Alpha-Beta-Loop (ABL) BM527_16190 PF00512 His Kinase A (phospho-acceptor) domain BM527_16200 PF08443 RimK-like ATP-grasp domain BM527_16200 PF18030 RimK PreATP-grasp domain BM527_16210 PF08443 RimK-like ATP-grasp domain BM527_16210 PF18030 RimK PreATP-grasp domain BM527_16220 PF00072 Response regulator receiver domain BM527_16220 PF00196 Bacterial regulatory proteins, luxR family BM527_16235 PF02690 Na+/Pi-cotransporter BM527_16240 PF00248 Aldo/keto reductase family BM527_16250 PF00082 Subtilase family BM527_16265 PF00069 Protein kinase domain BM527_16270 PF07730 Histidine kinase BM527_16270 PF05384 Sensor protein DegS BM527_16270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_16275 PF00072 Response regulator receiver domain BM527_16275 PF00196 Bacterial regulatory proteins, luxR family BM527_16280 PF00082 Subtilase family BM527_16340 PF00664 ABC transporter transmembrane region BM527_16340 PF00005 ABC transporter BM527_16340 PF03412 Peptidase C39 family BM527_16345 PF03466 LysR substrate binding domain BM527_16345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_16370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BM527_16370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BM527_16370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BM527_16375 PF00535 Glycosyl transferase family 2 BM527_16380 PF16363 GDP-mannose 4,6 dehydratase BM527_16385 PF04321 RmlD substrate binding domain BM527_16390 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BM527_16395 PF00483 Nucleotidyl transferase BM527_16410 PF00535 Glycosyl transferase family 2 BM527_16425 PF03150 Di-haem cytochrome c peroxidase BM527_16425 PF14376 Haem-binding domain BM527_16425 PF00034 Cytochrome c BM527_16470 PF16363 GDP-mannose 4,6 dehydratase BM527_16475 PF16363 GDP-mannose 4,6 dehydratase BM527_16480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BM527_16485 PF14602 Hexapeptide repeat of succinyl-transferase BM527_16485 PF12464 Maltose acetyltransferase BM527_16485 PF00132 Bacterial transferase hexapeptide (six repeats) BM527_16505 PF00535 Glycosyl transferase family 2 BM527_16510 PF08889 WbqC-like protein family BM527_16525 PF13439 Glycosyltransferase Family 4 BM527_16525 PF00534 Glycosyl transferases group 1 BM527_16535 PF00005 ABC transporter BM527_16545 PF00483 Nucleotidyl transferase BM527_16545 PF01050 Mannose-6-phosphate isomerase BM527_16550 PF00263 Bacterial type II and III secretion system protein BM527_16550 PF03958 Bacterial type II/III secretion system short domain BM527_16570 PF00437 Type II/IV secretion system protein BM527_16575 PF00482 Type II secretion system (T2SS), protein F BM527_16580 PF07963 Prokaryotic N-terminal methylation motif BM527_16580 PF08334 Type II secretion system (T2SS), protein G BM527_16625 PF00535 Glycosyl transferase family 2 BM527_16645 PF14307 Glycosyltransferase WbsX BM527_16645 PF05045 Rhamnan synthesis protein F BM527_16680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BM527_16680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BM527_16680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BM527_16680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BM527_16690 PF00700 Bacterial flagellin C-terminal helical region BM527_16690 PF07196 Flagellin hook IN motif BM527_16690 PF00669 Bacterial flagellin N-terminal helical region BM527_16695 PF01196 Ribosomal protein L17 BM527_16700 PF01000 RNA polymerase Rpb3/RpoA insert domain BM527_16700 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BM527_16700 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BM527_16705 PF01479 S4 domain BM527_16705 PF00163 Ribosomal protein S4/S9 N-terminal domain BM527_16710 PF00411 Ribosomal protein S11 BM527_16715 PF00416 Ribosomal protein S13/S18 BM527_16720 PF00444 Ribosomal protein L36 BM527_16725 PF00344 SecY translocase BM527_16730 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BM527_16735 PF00327 Ribosomal protein L30p/L7e BM527_16740 PF00333 Ribosomal protein S5, N-terminal domain BM527_16740 PF03719 Ribosomal protein S5, C-terminal domain BM527_16745 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BM527_16750 PF00347 Ribosomal protein L6 BM527_16755 PF00410 Ribosomal protein S8 BM527_16760 PF00253 Ribosomal protein S14p/S29e BM527_16765 PF00673 ribosomal L5P family C-terminus BM527_16765 PF00281 Ribosomal protein L5 BM527_16770 PF00467 KOW motif BM527_16770 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BM527_16775 PF00238 Ribosomal protein L14p/L23e BM527_16795 PF08032 RNA 2'-O ribose methyltransferase substrate binding BM527_16795 PF00588 SpoU rRNA Methylase family BM527_16800 PF00575 S1 RNA binding domain BM527_16800 PF17876 Cold shock domain BM527_16800 PF08461 Ribonuclease R winged-helix domain BM527_16800 PF08206 Ribonuclease B OB domain BM527_16800 PF00773 RNB domain BM527_16815 PF16655 PhoD-like phosphatase, N-terminal domain BM527_16815 PF09423 PhoD-like phosphatase BM527_16820 PF00593 TonB dependent receptor BM527_16820 PF07715 TonB-dependent Receptor Plug Domain BM527_16835 PF08238 Sel1 repeat BM527_16845 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BM527_16850 PF00175 Oxidoreductase NAD-binding domain BM527_16850 PF00970 Oxidoreductase FAD-binding domain BM527_16855 PF04389 Peptidase family M28 BM527_16865 PF00512 His Kinase A (phospho-acceptor) domain BM527_16865 PF08446 PAS fold BM527_16865 PF00360 Phytochrome region BM527_16865 PF01590 GAF domain BM527_16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_16875 PF01654 Cytochrome bd terminal oxidase subunit I BM527_16880 PF02322 Cytochrome bd terminal oxidase subunit II BM527_16885 PF13404 AsnC-type helix-turn-helix domain BM527_16885 PF01037 Lrp/AsnC ligand binding domain BM527_16895 PF00313 'Cold-shock' DNA-binding domain BM527_16900 PF03109 ABC1 family BM527_16910 PF01209 ubiE/COQ5 methyltransferase family BM527_16920 PF01432 Peptidase family M3 BM527_16925 PF00072 Response regulator receiver domain BM527_16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_16935 PF00989 PAS fold BM527_16935 PF00512 His Kinase A (phospho-acceptor) domain BM527_16940 PF02954 Bacterial regulatory protein, Fis family BM527_16940 PF00158 Sigma-54 interaction domain BM527_16940 PF00072 Response regulator receiver domain BM527_16945 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM527_16945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BM527_16950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BM527_16950 PF00384 Molybdopterin oxidoreductase BM527_16950 PF01568 Molydopterin dinucleotide binding domain BM527_16955 PF01979 Amidohydrolase family BM527_17010 PF00196 Bacterial regulatory proteins, luxR family BM527_17030 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system BM527_17035 PF07724 AAA domain (Cdc48 subfamily) BM527_17035 PF00004 ATPase family associated with various cellular activities (AAA) BM527_17040 PF00227 Proteasome subunit BM527_17055 PF05036 Sporulation related domain BM527_17060 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BM527_17060 PF18074 Primosomal protein N C-terminal domain BM527_17060 PF17764 3′ DNA-binding domain (3′BD) BM527_17060 PF00271 Helicase conserved C-terminal domain BM527_17060 PF00270 DEAD/DEAH box helicase BM527_17065 PF01197 Ribosomal protein L31 BM527_17075 PF03949 Malic enzyme, NAD binding domain BM527_17075 PF00390 Malic enzyme, N-terminal domain BM527_17080 PF01340 Met Apo-repressor, MetJ BM527_17085 PF02219 Methylenetetrahydrofolate reductase BM527_17090 PF03631 Virulence factor BrkB BM527_17105 PF00561 alpha/beta hydrolase fold BM527_17110 PF02580 D-Tyr-tRNA(Tyr) deacylase BM527_17115 PF09500 Putative thioesterase (yiiD_Cterm) BM527_17115 PF00583 Acetyltransferase (GNAT) family BM527_17120 PF04542 Sigma-70 region 2 BM527_17120 PF04545 Sigma-70, region 4 BM527_17120 PF00140 Sigma-70 factor, region 1.2 BM527_17125 PF08668 HDOD domain BM527_17125 PF00563 EAL domain BM527_17130 PF08668 HDOD domain BM527_17130 PF00563 EAL domain BM527_17135 PF18075 FtsX extracellular domain BM527_17140 PF00005 ABC transporter BM527_17145 PF02881 SRP54-type protein, helical bundle domain BM527_17145 PF00448 SRP54-type protein, GTPase domain BM527_17160 PF01914 MarC family integral membrane protein BM527_17170 PF00883 Cytosol aminopeptidase family, catalytic domain BM527_17170 PF12404 Peptidase BM527_17175 PF17746 SfsA N-terminal OB domain BM527_17175 PF03749 Sugar fermentation stimulation protein RE domain BM527_17180 PF01258 Prokaryotic dksA/traR C4-type zinc finger BM527_17185 PF00749 tRNA synthetases class I (E and Q), catalytic domain BM527_17190 PF12626 Polymerase A arginine-rich C-terminus BM527_17190 PF01743 Poly A polymerase head domain BM527_17190 PF12627 Probable RNA and SrmB- binding site of polymerase A BM527_17195 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BM527_17200 PF02548 Ketopantoate hydroxymethyltransferase BM527_17205 PF02569 Pantoate-beta-alanine ligase BM527_17210 PF00282 Pyridoxal-dependent decarboxylase conserved domain BM527_17225 PF01061 ABC-2 type transporter BM527_17230 PF00005 ABC transporter BM527_17235 PF00072 Response regulator receiver domain BM527_17235 PF00486 Transcriptional regulatory protein, C terminal BM527_17240 PF00512 His Kinase A (phospho-acceptor) domain BM527_17240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_17240 PF00672 HAMP domain BM527_17245 PF07715 TonB-dependent Receptor Plug Domain BM527_17245 PF00593 TonB dependent receptor BM527_17250 PF18331 PKHD-type hydroxylase C-terminal domain BM527_17250 PF13640 2OG-Fe(II) oxygenase superfamily BM527_17275 PF00571 CBS domain BM527_17275 PF01595 Cyclin M transmembrane N-terminal domain BM527_17280 PF03773 Predicted permease BM527_17285 PF13722 5TM C-terminal transporter carbon starvation CstA BM527_17285 PF02554 Carbon starvation protein CstA BM527_17315 PF03144 Elongation factor Tu domain 2 BM527_17315 PF00009 Elongation factor Tu GTP binding domain BM527_17315 PF03764 Elongation factor G, domain IV BM527_17315 PF14492 Elongation Factor G, domain II BM527_17315 PF00679 Elongation factor G C-terminus BM527_17320 PF00177 Ribosomal protein S7p/S5e BM527_17325 PF00164 Ribosomal protein S12/S23 BM527_17330 PF04983 RNA polymerase Rpb1, domain 3 BM527_17330 PF04997 RNA polymerase Rpb1, domain 1 BM527_17330 PF05000 RNA polymerase Rpb1, domain 4 BM527_17330 PF04998 RNA polymerase Rpb1, domain 5 BM527_17330 PF00623 RNA polymerase Rpb1, domain 2 BM527_17335 PF00562 RNA polymerase Rpb2, domain 6 BM527_17335 PF04560 RNA polymerase Rpb2, domain 7 BM527_17335 PF04561 RNA polymerase Rpb2, domain 2 BM527_17335 PF04565 RNA polymerase Rpb2, domain 3 BM527_17335 PF10385 RNA polymerase beta subunit external 1 domain BM527_17335 PF04563 RNA polymerase beta subunit BM527_17340 PF16320 Ribosomal protein L7/L12 dimerisation domain BM527_17340 PF00542 Ribosomal protein L7/L12 C-terminal domain BM527_17345 PF00466 Ribosomal protein L10 BM527_17350 PF00687 Ribosomal protein L1p/L10e family BM527_17355 PF03946 Ribosomal protein L11, N-terminal domain BM527_17355 PF00298 Ribosomal protein L11, RNA binding domain BM527_17365 PF00990 Diguanylate cyclase, GGDEF domain BM527_17365 PF05230 MASE2 domain BM527_17370 PF00467 KOW motif BM527_17370 PF02357 Transcription termination factor nusG BM527_17375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BM527_17385 PF00005 ABC transporter BM527_17385 PF00664 ABC transporter transmembrane region BM527_17390 PF03737 Aldolase/RraA BM527_17395 PF01431 Peptidase family M13 BM527_17395 PF05649 Peptidase family M13 BM527_17410 PF03880 DbpA RNA binding domain BM527_17410 PF00271 Helicase conserved C-terminal domain BM527_17410 PF00270 DEAD/DEAH box helicase BM527_17420 PF01979 Amidohydrolase family BM527_17425 PF08212 Lipocalin-like domain BM527_17430 PF00248 Aldo/keto reductase family BM527_17435 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BM527_17440 PF00924 Mechanosensitive ion channel BM527_17440 PF05552 Conserved TM helix BM527_17445 PF07690 Major Facilitator Superfamily BM527_17450 PF00128 Alpha amylase, catalytic domain BM527_17460 PF01227 GTP cyclohydrolase I BM527_17470 PF04371 Porphyromonas-type peptidyl-arginine deiminase BM527_17475 PF00795 Carbon-nitrogen hydrolase BM527_17490 PF08494 DEAD/H associated BM527_17490 PF00271 Helicase conserved C-terminal domain BM527_17490 PF00270 DEAD/DEAH box helicase BM527_17510 PF04679 ATP dependent DNA ligase C terminal region BM527_17510 PF01068 ATP dependent DNA ligase domain BM527_17510 PF04675 DNA ligase N terminus BM527_17515 PF01132 Elongation factor P (EF-P) OB domain BM527_17515 PF08207 Elongation factor P (EF-P) KOW-like domain BM527_17515 PF09285 Elongation factor P, C-terminal BM527_17520 PF00294 pfkB family carbohydrate kinase BM527_17525 PF00480 ROK family BM527_17530 PF02574 Homocysteine S-methyltransferase BM527_17530 PF02310 B12 binding domain BM527_17530 PF02607 B12 binding domain BM527_17530 PF02965 Vitamin B12 dependent methionine synthase, activation domain BM527_17530 PF00809 Pterin binding enzyme BM527_17535 PF02798 Glutathione S-transferase, N-terminal domain BM527_17535 PF00043 Glutathione S-transferase, C-terminal domain BM527_17540 PF02798 Glutathione S-transferase, N-terminal domain BM527_17550 PF00561 alpha/beta hydrolase fold BM527_17565 PF00171 Aldehyde dehydrogenase family BM527_17570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BM527_17570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BM527_17570 PF00205 Thiamine pyrophosphate enzyme, central domain BM527_17580 PF00762 Ferrochelatase BM527_17585 PF03806 AbgT putative transporter family BM527_17590 PF01145 SPFH domain / Band 7 family BM527_17595 PF12221 Bacterial membrane protein N terminal BM527_17595 PF01145 SPFH domain / Band 7 family BM527_17600 PF13167 GTP-binding GTPase N-terminal BM527_17600 PF01926 50S ribosome-binding GTPase BM527_17600 PF16360 GTP-binding GTPase Middle Region BM527_17605 PF17209 Hfq protein BM527_17615 PF01119 DNA mismatch repair protein, C-terminal domain BM527_17615 PF08676 MutL C terminal dimerisation domain BM527_17620 PF01520 N-acetylmuramoyl-L-alanine amidase BM527_17625 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BM527_17630 PF01256 Carbohydrate kinase BM527_17630 PF03853 YjeF-related protein N-terminus BM527_17635 PF08331 Domain of unknown function (DUF1730) BM527_17645 PF01208 Uroporphyrinogen decarboxylase (URO-D) BM527_17650 PF09297 NADH pyrophosphatase zinc ribbon domain BM527_17650 PF00293 NUDIX domain BM527_17655 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BM527_17660 PF01475 Ferric uptake regulator family BM527_17670 PF01894 Uncharacterised protein family UPF0047 BM527_17675 PF00691 OmpA family BM527_17675 PF05736 OprF membrane domain BM527_17680 PF00772 DnaB-like helicase N terminal domain BM527_17680 PF03796 DnaB-like helicase C terminal domain BM527_17705 PF03473 MOSC domain BM527_17705 PF03475 3-alpha domain BM527_17720 PF03948 Ribosomal protein L9, C-terminal domain BM527_17720 PF01281 Ribosomal protein L9, N-terminal domain BM527_17725 PF01084 Ribosomal protein S18 BM527_17730 PF01250 Ribosomal protein S6 BM527_17735 PF00072 Response regulator receiver domain BM527_17735 PF01627 Hpt domain BM527_17735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_17735 PF00512 His Kinase A (phospho-acceptor) domain BM527_17735 PF00672 HAMP domain BM527_17745 PF00005 ABC transporter BM527_17755 PF08447 PAS fold BM527_17755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_17760 PF13426 PAS domain BM527_17760 PF13188 PAS domain BM527_17760 PF00989 PAS fold BM527_17760 PF00512 His Kinase A (phospho-acceptor) domain BM527_17760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_17765 PF00672 HAMP domain BM527_17765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_17765 PF05227 CHASE3 domain BM527_17780 PF03601 Conserved hypothetical protein 698 BM527_17785 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BM527_17790 PF00248 Aldo/keto reductase family BM527_17810 PF00474 Sodium:solute symporter family BM527_17815 PF00593 TonB dependent receptor BM527_17815 PF07715 TonB-dependent Receptor Plug Domain BM527_17820 PF16916 Dimerisation domain of Zinc Transporter BM527_17820 PF01545 Cation efflux family BM527_17850 PF00722 Glycosyl hydrolases family 16 BM527_17860 PF08448 PAS fold BM527_17860 PF00990 Diguanylate cyclase, GGDEF domain BM527_17865 PF14310 Fibronectin type III-like domain BM527_17865 PF01915 Glycosyl hydrolase family 3 C-terminal domain BM527_17865 PF00933 Glycosyl hydrolase family 3 N terminal domain BM527_17870 PF07690 Major Facilitator Superfamily BM527_17875 PF00232 Glycosyl hydrolase family 1 BM527_17880 PF00356 Bacterial regulatory proteins, lacI family BM527_17885 PF00083 Sugar (and other) transporter BM527_17890 PF00005 ABC transporter BM527_17890 PF00664 ABC transporter transmembrane region BM527_17895 PF00664 ABC transporter transmembrane region BM527_17895 PF00005 ABC transporter BM527_17900 PF08173 Membrane bound YbgT-like protein BM527_17905 PF02322 Cytochrome bd terminal oxidase subunit II BM527_17910 PF01654 Cytochrome bd terminal oxidase subunit I BM527_17920 PF00158 Sigma-54 interaction domain BM527_17920 PF00072 Response regulator receiver domain BM527_17920 PF02954 Bacterial regulatory protein, Fis family BM527_17945 PF13474 SnoaL-like domain BM527_17950 PF00857 Isochorismatase family BM527_17955 PF00034 Cytochrome c BM527_17960 PF01979 Amidohydrolase family BM527_17965 PF02678 Pirin BM527_17965 PF05726 Pirin C-terminal cupin domain BM527_17975 PF07715 TonB-dependent Receptor Plug Domain BM527_17975 PF00593 TonB dependent receptor BM527_17990 PF02649 Type I GTP cyclohydrolase folE2 BM527_18015 PF00990 Diguanylate cyclase, GGDEF domain BM527_18015 PF05230 MASE2 domain BM527_18025 PF08021 Siderophore-interacting FAD-binding domain BM527_18025 PF04954 Siderophore-interacting protein BM527_18030 PF05532 CsbD-like BM527_18040 PF00472 RF-1 domain BM527_18045 PF00364 Biotin-requiring enzyme BM527_18045 PF00561 alpha/beta hydrolase fold BM527_18070 PF01292 Prokaryotic cytochrome b561 BM527_18075 PF04264 YceI-like domain BM527_18080 PF07992 Pyridine nucleotide-disulphide oxidoreductase BM527_18085 PF00593 TonB dependent receptor BM527_18085 PF07715 TonB-dependent Receptor Plug Domain BM527_18095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_18095 PF03466 LysR substrate binding domain BM527_18100 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BM527_18105 PF16884 N-terminal domain of oxidoreductase BM527_18105 PF00107 Zinc-binding dehydrogenase BM527_18110 PF00360 Phytochrome region BM527_18110 PF00990 Diguanylate cyclase, GGDEF domain BM527_18110 PF01590 GAF domain BM527_18110 PF00563 EAL domain BM527_18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_18115 PF00072 Response regulator receiver domain BM527_18115 PF09308 LuxQ, periplasmic BM527_18115 PF00512 His Kinase A (phospho-acceptor) domain BM527_18125 PF00296 Luciferase-like monooxygenase BM527_18130 PF01380 SIS domain BM527_18135 PF00455 DeoR C terminal sensor domain BM527_18135 PF08220 DeoR-like helix-turn-helix domain BM527_18140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BM527_18140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BM527_18145 PF00132 Bacterial transferase hexapeptide (six repeats) BM527_18145 PF12804 MobA-like NTP transferase domain BM527_18145 PF14602 Hexapeptide repeat of succinyl-transferase BM527_18155 PF00892 EamA-like transporter family BM527_18160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BM527_18160 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BM527_18165 PF06029 AlkA N-terminal domain BM527_18165 PF00730 HhH-GPD superfamily base excision DNA repair protein BM527_18170 PF00144 Beta-lactamase BM527_18175 PF17810 Arginine decarboxylase helical bundle domain BM527_18175 PF17944 Arginine decarboxylase C-terminal helical extension BM527_18175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BM527_18185 PF02233 NAD(P) transhydrogenase beta subunit BM527_18190 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BM527_18195 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BM527_18195 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BM527_18215 PF08447 PAS fold BM527_18215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BM527_18215 PF13426 PAS domain BM527_18220 PF00118 TCP-1/cpn60 chaperonin family BM527_18225 PF00166 Chaperonin 10 Kd subunit BM527_18235 PF03091 CutA1 divalent ion tolerance protein BM527_18240 PF02683 Cytochrome C biogenesis protein transmembrane region BM527_18240 PF11412 Disulphide bond corrector protein DsbC BM527_18245 PF01551 Peptidase family M23 BM527_18250 PF01220 Dehydroquinase class II BM527_18255 PF00364 Biotin-requiring enzyme BM527_18260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BM527_18260 PF02785 Biotin carboxylase C-terminal domain BM527_18260 PF00289 Biotin carboxylase, N-terminal domain BM527_18280 PF02811 PHP domain BM527_18280 PF07733 Bacterial DNA polymerase III alpha NTPase domain BM527_18280 PF14579 Helix-hairpin-helix motif BM527_18280 PF00929 Exonuclease BM527_18280 PF11490 DNA polymerase III polC-type N-terminus II BM527_18280 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BM527_18295 PF01355 High potential iron-sulfur protein BM527_18300 PF01425 Amidase BM527_18315 PF01207 Dihydrouridine synthase (Dus) BM527_18320 PF02954 Bacterial regulatory protein, Fis family BM527_18325 PF02142 MGS-like domain BM527_18325 PF01808 AICARFT/IMPCHase bienzyme BM527_18335 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BM527_18335 PF02844 Phosphoribosylglycinamide synthetase, N domain BM527_18335 PF02843 Phosphoribosylglycinamide synthetase, C domain BM527_18345 PF00520 Ion transport protein BM527_18345 PF00027 Cyclic nucleotide-binding domain BM527_18350 PF00485 Phosphoribulokinase / Uridine kinase family BM527_18360 PF00486 Transcriptional regulatory protein, C terminal BM527_18360 PF00072 Response regulator receiver domain BM527_18365 PF00512 His Kinase A (phospho-acceptor) domain BM527_18365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BM527_18365 PF00672 HAMP domain BM527_18375 PF01055 Glycosyl hydrolases family 31 BM527_18375 PF17137 Domain of unknown function (DUF5110) BM527_18375 PF16338 Domain of unknown function (DUF4968) BM527_18375 PF13802 Galactose mutarotase-like BM527_18385 PF01430 Hsp33 protein BM527_18390 PF01479 S4 domain BM527_18395 PF11356 Type II secretion system protein C BM527_18400 PF03958 Bacterial type II/III secretion system short domain BM527_18400 PF00263 Bacterial type II and III secretion system protein BM527_18405 PF00437 Type II/IV secretion system protein BM527_18410 PF00482 Type II secretion system (T2SS), protein F BM527_18415 PF08334 Type II secretion system (T2SS), protein G BM527_18415 PF07963 Prokaryotic N-terminal methylation motif BM527_18420 PF12019 Type II transport protein GspH BM527_18425 PF02501 Type II secretion system (T2SS), protein I BM527_18425 PF07963 Prokaryotic N-terminal methylation motif BM527_18430 PF11612 Type II secretion system (T2SS), protein J BM527_18430 PF07963 Prokaryotic N-terminal methylation motif BM527_18435 PF03934 Type II secretion system (T2SS), protein K BM527_18440 PF05134 Type II secretion system (T2SS), protein L BM527_18440 PF12693 GspL periplasmic domain BM527_18445 PF04612 Type II secretion system (T2SS), protein M BM527_18465 PF00171 Aldehyde dehydrogenase family BM527_18470 PF01931 Protein of unknown function DUF84 BM527_18475 PF13419 Haloacid dehalogenase-like hydrolase BM527_18480 PF00293 NUDIX domain BM527_18485 PF00459 Inositol monophosphatase family BM527_18500 PF04349 Periplasmic glucan biosynthesis protein, MdoG BM527_18510 PF06794 Uncharacterised protein family (UPF0270) BM527_18515 PF00561 alpha/beta hydrolase fold BM527_18525 PF00005 ABC transporter BM527_18525 PF12848 ABC transporter BM527_18540 PF04102 SlyX BM527_18550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BM527_18550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BM527_18560 PF03449 Transcription elongation factor, N-terminal BM527_18560 PF01272 Transcription elongation factor, GreA/GreB, C-term BM527_18565 PF17674 HHH domain BM527_18565 PF16921 Tex protein YqgF-like domain BM527_18565 PF09371 Tex-like protein N-terminal domain BM527_18565 PF00575 S1 RNA binding domain BM527_18585 PF00561 alpha/beta hydrolase fold BM527_18590 PF00156 Phosphoribosyl transferase domain BM527_18600 PF01521 Iron-sulphur cluster biosynthesis BM527_18600 PF01106 NifU-like domain BM527_18610 PF01177 Asp/Glu/Hydantoin racemase BM527_18625 PF01554 MatE BM527_18630 PF14883 Hypothetical glycosyl hydrolase family 13 BM527_18630 PF01522 Polysaccharide deacetylase BM527_18640 PF02630 SCO1/SenC BM527_18645 PF01040 UbiA prenyltransferase family BM527_18650 PF02628 Cytochrome oxidase assembly protein BM527_18670 PF00510 Cytochrome c oxidase subunit III BM527_18675 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BM527_18680 PF00115 Cytochrome C and Quinol oxidase polypeptide I BM527_18685 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BM527_18685 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BM527_18690 PF00717 Peptidase S24-like BM527_18690 PF01726 LexA DNA binding domain BM527_18695 PF17151 Periplasmic sensor domain BM527_18695 PF00990 Diguanylate cyclase, GGDEF domain BM527_18700 PF01553 Acyltransferase BM527_18705 PF00291 Pyridoxal-phosphate dependent enzyme BM527_18705 PF00585 C-terminal regulatory domain of Threonine dehydratase BM527_18710 PF00920 Dehydratase family BM527_18715 PF03458 UPF0126 domain BM527_18720 PF13335 Magnesium chelatase, subunit ChlI C-terminal BM527_18720 PF01078 Magnesium chelatase, subunit ChlI BM527_18725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BM527_18725 PF03466 LysR substrate binding domain BM527_18730 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BM527_18730 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BM527_18735 PF07690 Major Facilitator Superfamily BM527_18740 PF00326 Prolyl oligopeptidase family BM527_18745 PF07244 Surface antigen variable number repeat BM527_18745 PF17243 POTRA domain TamA domain 1 BM527_18745 PF01103 Surface antigen BM527_18750 PF04357 TamB, inner membrane protein subunit of TAM complex BM527_18775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BM527_18775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BM527_18785 PF01472 PUA domain BM527_18785 PF00696 Amino acid kinase family BM527_18805 PF03109 ABC1 family BM527_18830 PF01979 Amidohydrolase family BM527_18850 PF01206 Sulfurtransferase TusA BM527_18855 PF00156 Phosphoribosyl transferase domain BM527_18860 PF03725 3' exoribonuclease family, domain 2 BM527_18860 PF01138 3' exoribonuclease family, domain 1 BM527_18865 PF03755 YicC-like family, N-terminal region BM527_18865 PF08340 Domain of unknown function (DUF1732) BM527_18885 PF00232 Glycosyl hydrolase family 1 BM527_18895 PF00356 Bacterial regulatory proteins, lacI family BM527_18905 PF05736 OprF membrane domain BM527_18905 PF00691 OmpA family BM527_18910 PF01966 HD domain BM527_18910 PF00672 HAMP domain BM527_18925 PF02798 Glutathione S-transferase, N-terminal domain BM527_18925 PF00043 Glutathione S-transferase, C-terminal domain BM527_18935 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BM527_18935 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BM527_18940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM527_18940 PF02874 ATP synthase alpha/beta family, beta-barrel domain BM527_18945 PF00231 ATP synthase BM527_18950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BM527_18950 PF00306 ATP synthase alpha/beta chain, C terminal domain BM527_18950 PF02874 ATP synthase alpha/beta family, beta-barrel domain BM527_18955 PF00213 ATP synthase delta (OSCP) subunit BM527_18960 PF00430 ATP synthase B/B' CF(0) BM527_18965 PF00137 ATP synthase subunit C BM527_18970 PF00119 ATP synthase A chain BM527_18980 PF02195 ParB-like nuclease domain BM527_18980 PF17762 HTH domain found in ParB protein BM527_18985 PF13614 AAA domain BM527_18990 PF02527 rRNA small subunit methyltransferase G BM527_18995 PF01134 Glucose inhibited division protein A BM527_18995 PF13932 GidA associated domain BM527_19010 PF00258 Flavodoxin BM527_19015 PF12631 MnmE helical domain BM527_19015 PF10396 GTP-binding protein TrmE N-terminus BM527_19015 PF01926 50S ribosome-binding GTPase BM527_19020 PF04461 Protein of unknown function (DUF520) BM527_19025 PF02096 60Kd inner membrane protein BM527_19025 PF14849 YidC periplasmic domain BM527_19030 PF00825 Ribonuclease P BM527_19035 PF00468 Ribosomal protein L34