BM527_00005 SM00382 ATPases associated with a variety of cellular activities BM527_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BM527_00010 SM00480 DNA polymerase III beta subunit BM527_00020 SM00387 Histidine kinase-like ATPases BM527_00020 SM00433 TopoisomeraseII BM527_00040 SM00836 DALR anticodon binding domain BM527_00080 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BM527_00080 SM00474 3'-5' exonuclease BM527_00080 SM00475 5'-3' exonuclease BM527_00080 SM00482 DNA polymerase A domain BM527_00115 SM00257 Lysin motif BM527_00210 SM00481 DNA polymerase alpha chain like domain BM527_00305 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BM527_00305 SM01232 BM527_00305 BM527_00335 SM00052 Putative diguanylate phosphodiesterase BM527_00335 SM00267 diguanylate cyclase BM527_00345 SM00829 Enoylreductase BM527_00350 SM00450 Rhodanese Homology Domain BM527_00385 SM00052 Putative diguanylate phosphodiesterase BM527_00385 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM527_00385 SM00267 diguanylate cyclase BM527_00430 SM00849 Metallo-beta-lactamase superfamily BM527_00450 SM00382 ATPases associated with a variety of cellular activities BM527_00455 SM00382 ATPases associated with a variety of cellular activities BM527_00480 SM00450 Rhodanese Homology Domain BM527_00485 SM00849 Metallo-beta-lactamase superfamily BM527_00505 SM00421 helix_turn_helix, Lux Regulon BM527_00565 SM00382 ATPases associated with a variety of cellular activities BM527_00595 SM00849 Metallo-beta-lactamase superfamily BM527_00615 SM00876 Biotin and Thiamin Synthesis associated domain BM527_00665 SM00267 diguanylate cyclase BM527_00675 SM00072 Guanylate kinase homologues. BM527_00680 SM01409 BM527_00680 BM527_00685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM527_00685 SM00954 Region found in RelA / SpoT proteins BM527_00700 SM00487 DEAD-like helicases superfamily BM527_00700 SM00490 helicase superfamily c-terminal domain BM527_00730 SM00382 ATPases associated with a variety of cellular activities BM527_00755 SM00052 Putative diguanylate phosphodiesterase BM527_00755 SM01034 Sensors of blue-light using FAD BM527_00760 SM00267 diguanylate cyclase BM527_00840 SM00052 Putative diguanylate phosphodiesterase BM527_00840 SM00267 diguanylate cyclase BM527_00855 SM00341 Helicase and RNase D C-terminal BM527_00855 SM00487 DEAD-like helicases superfamily BM527_00855 SM00490 helicase superfamily c-terminal domain BM527_00855 SM00956 BM527_00855 BM527_00865 SM00924 MgtE intracellular N domain BM527_00875 SM00267 diguanylate cyclase BM527_00875 SM00448 cheY-homologous receiver domain BM527_00885 SM00971 Serine acetyltransferase, N-terminal BM527_00925 SM00014 Acid phosphatase homologues BM527_00965 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BM527_01005 SM00354 helix_turn _helix lactose operon repressor BM527_01085 SM00530 Helix-turn-helix XRE-family like proteins BM527_01095 SM00487 DEAD-like helicases superfamily BM527_01110 SM00857 Resolvase, N terminal domain BM527_01125 SM00487 DEAD-like helicases superfamily BM527_01170 SM00420 helix_turn_helix, Deoxyribose operon repressor BM527_01170 SM01134 BM527_01170 BM527_01210 SM00965 Secretin and TonB N terminus short domain BM527_01220 SM00028 Tetratricopeptide repeats BM527_01225 SM00382 ATPases associated with a variety of cellular activities BM527_01295 SM00316 Ribosomal protein S1-like RNA-binding domain BM527_01325 SM00342 helix_turn_helix, arabinose operon control protein BM527_01330 SM01038 Beta galactosidase small chain BM527_01335 SM00448 cheY-homologous receiver domain BM527_01335 SM00862 Transcriptional regulatory protein, C terminal BM527_01340 SM00387 Histidine kinase-like ATPases BM527_01365 SM00478 endonuclease III BM527_01365 SM00525 BM527_01365 BM527_01385 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_01390 SM00448 cheY-homologous receiver domain BM527_01395 SM00073 Histidine Phosphotransfer domain BM527_01395 SM00260 Two component signalling adaptor domain BM527_01395 SM00387 Histidine kinase-like ATPases BM527_01395 SM01231 BM527_01395 BM527_01400 SM00260 Two component signalling adaptor domain BM527_01405 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_01405 SM00091 PAS domain BM527_01405 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_01410 SM00138 Methyltransferase, chemotaxis proteins BM527_01420 SM00448 cheY-homologous receiver domain BM527_01425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_01430 SM00448 cheY-homologous receiver domain BM527_01435 SM00073 Histidine Phosphotransfer domain BM527_01435 SM00260 Two component signalling adaptor domain BM527_01435 SM00387 Histidine kinase-like ATPases BM527_01435 SM01231 BM527_01435 BM527_01440 SM00260 Two component signalling adaptor domain BM527_01445 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_01445 SM00091 PAS domain BM527_01445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_01445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_01450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_01450 SM00091 PAS domain BM527_01450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_01450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_01455 SM00138 Methyltransferase, chemotaxis proteins BM527_01465 SM00448 cheY-homologous receiver domain BM527_01480 SM00267 diguanylate cyclase BM527_01495 SM00342 helix_turn_helix, arabinose operon control protein BM527_01495 SM00387 Histidine kinase-like ATPases BM527_01495 SM00448 cheY-homologous receiver domain BM527_01510 SM00354 helix_turn _helix lactose operon repressor BM527_01590 SM00855 Phosphoglycerate mutase family BM527_01605 SM00671 Sel1-like repeats. BM527_01610 SM00382 ATPases associated with a variety of cellular activities BM527_01615 SM01403 BM527_01615 BM527_01635 SM01382 BM527_01635 BM527_01635 SM01383 BM527_01635 BM527_01650 SM00322 K homology RNA-binding domain BM527_01700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_01700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_01730 SM00487 DEAD-like helicases superfamily BM527_01730 SM00490 helicase superfamily c-terminal domain BM527_01765 SM00938 Nitrogen regulatory protein P-II BM527_01785 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BM527_01820 SM00073 Histidine Phosphotransfer domain BM527_01820 SM00387 Histidine kinase-like ATPases BM527_01820 SM00388 His Kinase A (phosphoacceptor) domain BM527_01820 SM00448 cheY-homologous receiver domain BM527_01825 SM00434 DNA Topoisomerase IV BM527_01835 SM00052 Putative diguanylate phosphodiesterase BM527_01835 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_01835 SM00091 PAS domain BM527_01835 SM00267 diguanylate cyclase BM527_01840 SM01150 BM527_01840 BM527_01915 SM00965 Secretin and TonB N terminus short domain BM527_01935 SM00842 Cell division protein FtsA BM527_01945 SM00919 Malic enzyme, NAD binding domain BM527_01945 SM01274 BM527_01945 BM527_02000 SM00859 Semialdehyde dehydrogenase, NAD binding domain BM527_02005 SM00851 MGS-like domain BM527_02015 SM00448 cheY-homologous receiver domain BM527_02015 SM00862 Transcriptional regulatory protein, C terminal BM527_02020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_02020 SM00387 Histidine kinase-like ATPases BM527_02020 SM00388 His Kinase A (phosphoacceptor) domain BM527_02055 SM00450 Rhodanese Homology Domain BM527_02095 SM00479 BM527_02095 BM527_02165 SM00267 diguanylate cyclase BM527_02170 SM01004 Delta-aminolevulinic acid dehydratase BM527_02180 SM00487 DEAD-like helicases superfamily BM527_02180 SM00490 helicase superfamily c-terminal domain BM527_02190 SM00357 Cold shock protein domain BM527_02190 SM00382 ATPases associated with a variety of cellular activities BM527_02190 SM00959 Rho termination factor, N-terminal domain BM527_02200 SM00387 Histidine kinase-like ATPases BM527_02200 SM00388 His Kinase A (phosphoacceptor) domain BM527_02200 SM00448 cheY-homologous receiver domain BM527_02210 SM01001 AIR carboxylase BM527_02225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_02295 SM00788 Adenylosuccinate synthetase BM527_02350 SM01005 Alanine racemase, C-terminal domain BM527_02380 SM00062 Bacterial periplasmic substrate-binding proteins BM527_02435 SM00530 Helix-turn-helix XRE-family like proteins BM527_02445 SM00670 Large family of predicted nucleotide-binding domains BM527_02515 SM00257 Lysin motif BM527_02555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_02555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_02555 SM01049 BM527_02555 BM527_02565 SM00287 Bacterial SH3 domain homologues BM527_02570 SM01118 BM527_02570 BM527_02580 SM00927 DNA mismatch repair enzyme MutH BM527_02590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM527_02610 SM00448 cheY-homologous receiver domain BM527_02615 SM00267 diguanylate cyclase BM527_02620 SM00387 Histidine kinase-like ATPases BM527_02620 SM00448 cheY-homologous receiver domain BM527_02645 SM00487 DEAD-like helicases superfamily BM527_02645 SM00490 helicase superfamily c-terminal domain BM527_02650 SM00670 Large family of predicted nucleotide-binding domains BM527_02665 SM00487 DEAD-like helicases superfamily BM527_02665 SM00490 helicase superfamily c-terminal domain BM527_02670 SM00028 Tetratricopeptide repeats BM527_02705 SM00387 Histidine kinase-like ATPases BM527_02705 SM00433 TopoisomeraseII BM527_02740 SM00841 Elongation factor P, C-terminal BM527_02740 SM01185 BM527_02740 BM527_02785 SM00014 Acid phosphatase homologues BM527_02830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_02830 SM00091 PAS domain BM527_02830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_02885 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BM527_02890 SM01007 Class II Aldolase and Adducin N-terminal domain BM527_02920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_02920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_02930 SM00400 zinc finger BM527_02930 SM00493 BM527_02930 BM527_02930 SM00766 DNA primase DnaG DnaB-binding BM527_02955 SM01207 BM527_02955 BM527_02960 SM00905 Dihydroneopterin aldolase BM527_02995 SM00530 Helix-turn-helix XRE-family like proteins BM527_03005 SM00387 Histidine kinase-like ATPases BM527_03010 SM00448 cheY-homologous receiver domain BM527_03010 SM00862 Transcriptional regulatory protein, C terminal BM527_03015 SM00387 Histidine kinase-like ATPases BM527_03015 SM00388 His Kinase A (phosphoacceptor) domain BM527_03025 SM00710 Parallel beta-helix repeats BM527_03060 SM00028 Tetratricopeptide repeats BM527_03065 SM00448 cheY-homologous receiver domain BM527_03065 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM527_03070 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_03070 SM00091 PAS domain BM527_03070 SM00387 Histidine kinase-like ATPases BM527_03070 SM00388 His Kinase A (phosphoacceptor) domain BM527_03070 SM00448 cheY-homologous receiver domain BM527_03075 SM00897 FIST N domain BM527_03075 SM01204 BM527_03075 BM527_03115 SM00387 Histidine kinase-like ATPases BM527_03115 SM00388 His Kinase A (phosphoacceptor) domain BM527_03115 SM00448 cheY-homologous receiver domain BM527_03120 SM00028 Tetratricopeptide repeats BM527_03155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_03155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_03170 SM00650 Ribosomal RNA adenine dimethylases BM527_03190 SM00271 DnaJ molecular chaperone homology domain BM527_03235 SM00954 Region found in RelA / SpoT proteins BM527_03280 SM00822 BM527_03280 BM527_03285 SM01236 BM527_03285 BM527_03330 SM00387 Histidine kinase-like ATPases BM527_03330 SM00388 His Kinase A (phosphoacceptor) domain BM527_03335 SM00448 cheY-homologous receiver domain BM527_03335 SM00862 Transcriptional regulatory protein, C terminal BM527_03380 SM00116 Domain in cystathionine beta-synthase and other proteins. BM527_03380 SM00924 MgtE intracellular N domain BM527_03410 SM00382 ATPases associated with a variety of cellular activities BM527_03440 SM00382 ATPases associated with a variety of cellular activities BM527_03475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BM527_03480 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BM527_03540 SM00052 Putative diguanylate phosphodiesterase BM527_03540 SM00267 diguanylate cyclase BM527_03580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_03580 SM00091 PAS domain BM527_03580 SM00387 Histidine kinase-like ATPases BM527_03580 SM00388 His Kinase A (phosphoacceptor) domain BM527_03580 SM00448 cheY-homologous receiver domain BM527_03605 SM00861 Transketolase, pyrimidine binding domain BM527_03610 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM527_03635 SM00448 cheY-homologous receiver domain BM527_03635 SM00862 Transcriptional regulatory protein, C terminal BM527_03640 SM00387 Histidine kinase-like ATPases BM527_03640 SM00388 His Kinase A (phosphoacceptor) domain BM527_03695 SM00382 ATPases associated with a variety of cellular activities BM527_03730 SM00347 helix_turn_helix multiple antibiotic resistance protein BM527_03740 SM01263 BM527_03740 BM527_03795 SM00345 helix_turn_helix gluconate operon transcriptional repressor BM527_03795 SM00866 BM527_03795 BM527_03830 SM00382 ATPases associated with a variety of cellular activities BM527_03850 SM00448 cheY-homologous receiver domain BM527_03855 SM00091 PAS domain BM527_03855 SM00387 Histidine kinase-like ATPases BM527_03855 SM00388 His Kinase A (phosphoacceptor) domain BM527_03855 SM00448 cheY-homologous receiver domain BM527_03865 SM00028 Tetratricopeptide repeats BM527_03900 SM00091 PAS domain BM527_03900 SM00448 cheY-homologous receiver domain BM527_03910 SM00382 ATPases associated with a variety of cellular activities BM527_03910 SM00448 cheY-homologous receiver domain BM527_03975 SM00850 LytTr DNA-binding domain BM527_03990 SM00448 cheY-homologous receiver domain BM527_03995 SM00091 PAS domain BM527_04015 SM00729 Elongator protein 3, MiaB family, Radical SAM BM527_04025 SM00487 DEAD-like helicases superfamily BM527_04025 SM00490 helicase superfamily c-terminal domain BM527_04040 SM00382 ATPases associated with a variety of cellular activities BM527_04050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM527_04065 SM01329 BM527_04065 BM527_04070 SM00917 LeuA allosteric (dimerisation) domain BM527_04080 SM01192 BM527_04080 BM527_04080 SM01193 BM527_04080 BM527_04090 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BM527_04090 SM00534 ATPase domain of DNA mismatch repair MUTS family BM527_04100 SM00382 ATPases associated with a variety of cellular activities BM527_04105 SM00382 ATPases associated with a variety of cellular activities BM527_04125 SM00382 ATPases associated with a variety of cellular activities BM527_04195 SM00382 ATPases associated with a variety of cellular activities BM527_04235 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BM527_04240 SM01329 BM527_04240 BM527_04260 SM00267 diguanylate cyclase BM527_04320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM527_04365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BM527_04375 SM00935 Outer membrane protein (OmpH-like) BM527_04400 SM00481 DNA polymerase alpha chain like domain BM527_04410 SM00977 TilS substrate C-terminal domain BM527_04415 SM00267 diguanylate cyclase BM527_04435 SM00062 Bacterial periplasmic substrate-binding proteins BM527_04440 SM01211 BM527_04440 BM527_04495 SM00487 DEAD-like helicases superfamily BM527_04575 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BM527_04585 SM00382 ATPases associated with a variety of cellular activities BM527_04595 SM00421 helix_turn_helix, Lux Regulon BM527_04600 SM00052 Putative diguanylate phosphodiesterase BM527_04630 SM00858 BM527_04630 BM527_04635 SM00260 Two component signalling adaptor domain BM527_04635 SM00448 cheY-homologous receiver domain BM527_04640 SM00138 Methyltransferase, chemotaxis proteins BM527_04685 SM00047 Lysozyme subfamily 2 BM527_04755 SM00858 BM527_04755 BM527_04860 SM00984 UDP binding domain BM527_04890 SM00382 ATPases associated with a variety of cellular activities BM527_04895 SM00387 Histidine kinase-like ATPases BM527_04895 SM00388 His Kinase A (phosphoacceptor) domain BM527_04900 SM00382 ATPases associated with a variety of cellular activities BM527_04900 SM00448 cheY-homologous receiver domain BM527_04925 SM00382 ATPases associated with a variety of cellular activities BM527_04985 SM00382 ATPases associated with a variety of cellular activities BM527_04985 SM00962 SRP54-type protein, GTPase domain BM527_05000 SM00448 cheY-homologous receiver domain BM527_05010 SM00073 Histidine Phosphotransfer domain BM527_05010 SM00260 Two component signalling adaptor domain BM527_05010 SM00387 Histidine kinase-like ATPases BM527_05010 SM01231 BM527_05010 BM527_05015 SM00448 cheY-homologous receiver domain BM527_05025 SM00260 Two component signalling adaptor domain BM527_05030 SM00260 Two component signalling adaptor domain BM527_05050 SM01018 B12 binding domain BM527_05075 SM00947 Carbonic anhydrase BM527_05110 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BM527_05150 SM00382 ATPases associated with a variety of cellular activities BM527_05155 SM00382 ATPases associated with a variety of cellular activities BM527_05175 SM00382 ATPases associated with a variety of cellular activities BM527_05200 SM00091 PAS domain BM527_05200 SM00382 ATPases associated with a variety of cellular activities BM527_05215 SM00344 helix_turn_helix ASNC type BM527_05220 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BM527_05250 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BM527_05265 SM00028 Tetratricopeptide repeats BM527_05270 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BM527_05300 SM00028 Tetratricopeptide repeats BM527_05375 SM00829 Enoylreductase BM527_05395 SM00347 helix_turn_helix multiple antibiotic resistance protein BM527_05435 SM00479 BM527_05435 BM527_05475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM527_05555 SM00382 ATPases associated with a variety of cellular activities BM527_05610 SM00487 DEAD-like helicases superfamily BM527_05610 SM00490 helicase superfamily c-terminal domain BM527_05650 SM00382 ATPases associated with a variety of cellular activities BM527_05670 SM00327 von Willebrand factor (vWF) type A domain BM527_05685 SM00778 Zinc-binding domain of primase-helicase BM527_05750 SM00530 Helix-turn-helix XRE-family like proteins BM527_05760 SM00836 DALR anticodon binding domain BM527_05760 SM01016 Arginyl tRNA synthetase N terminal dom BM527_05790 SM00267 diguanylate cyclase BM527_05810 SM00267 diguanylate cyclase BM527_05835 SM00937 BM527_05835 BM527_05880 SM00463 Small MutS-related domain BM527_05910 SM00763 PrkA AAA domain BM527_05940 SM00965 Secretin and TonB N terminus short domain BM527_05955 SM00479 BM527_05955 BM527_05980 SM00357 Cold shock protein domain BM527_05995 SM00478 endonuclease III BM527_06005 SM00900 BM527_06005 BM527_06040 SM00487 DEAD-like helicases superfamily BM527_06040 SM00490 helicase superfamily c-terminal domain BM527_06115 SM00267 diguanylate cyclase BM527_06140 SM00028 Tetratricopeptide repeats BM527_06145 SM00327 von Willebrand factor (vWF) type A domain BM527_06185 SM00052 Putative diguanylate phosphodiesterase BM527_06185 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_06185 SM00267 diguanylate cyclase BM527_06195 SM00855 Phosphoglycerate mutase family BM527_06205 SM01091 Transporter associated domain BM527_06215 SM00382 ATPases associated with a variety of cellular activities BM527_06215 SM00962 SRP54-type protein, GTPase domain BM527_06215 SM00963 SRP54-type protein, helical bundle domain BM527_06260 SM00382 ATPases associated with a variety of cellular activities BM527_06305 SM00830 Chorismate mutase type II BM527_06310 SM00830 Chorismate mutase type II BM527_06315 SM00448 cheY-homologous receiver domain BM527_06330 SM00331 Sigma factor PP2C-like phosphatases BM527_06330 SM00448 cheY-homologous receiver domain BM527_06340 SM00052 Putative diguanylate phosphodiesterase BM527_06340 SM00267 diguanylate cyclase BM527_06350 SM00387 Histidine kinase-like ATPases BM527_06350 SM00388 His Kinase A (phosphoacceptor) domain BM527_06360 SM00382 ATPases associated with a variety of cellular activities BM527_06360 SM00448 cheY-homologous receiver domain BM527_06365 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM527_06390 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BM527_06395 SM00382 ATPases associated with a variety of cellular activities BM527_06475 SM00028 Tetratricopeptide repeats BM527_06475 SM00387 Histidine kinase-like ATPases BM527_06475 SM00388 His Kinase A (phosphoacceptor) domain BM527_06475 SM00448 cheY-homologous receiver domain BM527_06485 SM00859 Semialdehyde dehydrogenase, NAD binding domain BM527_06490 SM00267 diguanylate cyclase BM527_06510 SM00116 Domain in cystathionine beta-synthase and other proteins. BM527_06550 SM00267 diguanylate cyclase BM527_06615 SM00729 Elongator protein 3, MiaB family, Radical SAM BM527_06615 SM00876 Biotin and Thiamin Synthesis associated domain BM527_06640 SM00226 Low molecular weight phosphatase family BM527_06650 SM00382 ATPases associated with a variety of cellular activities BM527_06660 SM00387 Histidine kinase-like ATPases BM527_06660 SM00388 His Kinase A (phosphoacceptor) domain BM527_06665 SM00448 cheY-homologous receiver domain BM527_06665 SM00862 Transcriptional regulatory protein, C terminal BM527_06690 SM00382 ATPases associated with a variety of cellular activities BM527_06695 SM00729 Elongator protein 3, MiaB family, Radical SAM BM527_06705 SM00028 Tetratricopeptide repeats BM527_06705 SM00448 cheY-homologous receiver domain BM527_06745 SM01321 BM527_06745 BM527_06755 SM00382 ATPases associated with a variety of cellular activities BM527_06770 SM00905 Dihydroneopterin aldolase BM527_06780 SM00387 Histidine kinase-like ATPases BM527_06785 SM00448 cheY-homologous receiver domain BM527_06785 SM00862 Transcriptional regulatory protein, C terminal BM527_06835 SM00481 DNA polymerase alpha chain like domain BM527_06855 SM00363 S4 RNA-binding domain BM527_06865 SM01266 BM527_06865 BM527_06945 SM00421 helix_turn_helix, Lux Regulon BM527_06945 SM00448 cheY-homologous receiver domain BM527_06955 SM00387 Histidine kinase-like ATPases BM527_06955 SM00388 His Kinase A (phosphoacceptor) domain BM527_06955 SM00448 cheY-homologous receiver domain BM527_06960 SM00671 Sel1-like repeats. BM527_06975 SM00271 DnaJ molecular chaperone homology domain BM527_06985 SM00052 Putative diguanylate phosphodiesterase BM527_06985 SM00091 PAS domain BM527_07005 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BM527_07010 SM00851 MGS-like domain BM527_07010 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BM527_07025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_07065 SM00116 Domain in cystathionine beta-synthase and other proteins. BM527_07065 SM01091 Transporter associated domain BM527_07080 SM00729 Elongator protein 3, MiaB family, Radical SAM BM527_07090 SM00671 Sel1-like repeats. BM527_07105 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BM527_07105 SM00235 Zinc-dependent metalloprotease BM527_07105 SM00564 beta-propeller repeat BM527_07165 SM00344 helix_turn_helix ASNC type BM527_07175 SM00903 Flavin reductase like domain BM527_07205 SM00829 Enoylreductase BM527_07220 SM01400 BM527_07220 BM527_07245 SM00937 BM527_07245 BM527_07255 SM00448 cheY-homologous receiver domain BM527_07300 SM00838 Elongation factor G C-terminus BM527_07300 SM00889 Elongation factor G, domain IV BM527_07305 SM00460 Transglutaminase/protease-like homologues BM527_07365 SM00052 Putative diguanylate phosphodiesterase BM527_07365 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_07365 SM00091 PAS domain BM527_07365 SM00267 diguanylate cyclase BM527_07385 SM00887 Ethylbenzene dehydrogenase BM527_07455 SM00347 helix_turn_helix multiple antibiotic resistance protein BM527_07475 SM00867 YceI-like domain BM527_07545 SM00052 Putative diguanylate phosphodiesterase BM527_07545 SM00091 PAS domain BM527_07545 SM00267 diguanylate cyclase BM527_07550 SM00052 Putative diguanylate phosphodiesterase BM527_07550 SM00267 diguanylate cyclase BM527_07580 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM527_07595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_07595 SM00091 PAS domain BM527_07595 SM00267 diguanylate cyclase BM527_07625 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM527_07630 SM01092 CO dehydrogenase flavoprotein C-terminal domain BM527_07665 SM00267 diguanylate cyclase BM527_07665 SM00448 cheY-homologous receiver domain BM527_07670 SM00387 Histidine kinase-like ATPases BM527_07670 SM00388 His Kinase A (phosphoacceptor) domain BM527_07670 SM00448 cheY-homologous receiver domain BM527_07755 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BM527_07780 SM00873 B3/4 domain BM527_07780 SM00874 tRNA synthetase B5 domain BM527_07780 SM00896 Ferredoxin-fold anticodon binding domain BM527_07785 SM00411 bacterial (prokaryotic) histone like domain BM527_07830 SM00487 DEAD-like helicases superfamily BM527_07830 SM00490 helicase superfamily c-terminal domain BM527_07830 SM00982 BM527_07830 BM527_07830 SM01058 CarD-like/TRCF domain BM527_07850 SM00387 Histidine kinase-like ATPases BM527_07855 SM00897 FIST N domain BM527_07855 SM01204 BM527_07855 BM527_07935 SM00878 Biotin carboxylase C-terminal domain BM527_07955 SM00422 helix_turn_helix, mercury resistance BM527_07975 SM00062 Bacterial periplasmic substrate-binding proteins BM527_07975 SM00267 diguanylate cyclase BM527_07985 SM00479 BM527_07985 BM527_07995 SM00116 Domain in cystathionine beta-synthase and other proteins. BM527_08015 SM00267 diguanylate cyclase BM527_08020 SM00342 helix_turn_helix, arabinose operon control protein BM527_08030 SM00382 ATPases associated with a variety of cellular activities BM527_08030 SM00487 DEAD-like helicases superfamily BM527_08030 SM00490 helicase superfamily c-terminal domain BM527_08030 SM00847 Helicase associated domain (HA2) Add an annotation BM527_08045 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BM527_08050 SM00829 Enoylreductase BM527_08060 SM00479 BM527_08060 BM527_08075 SM00052 Putative diguanylate phosphodiesterase BM527_08080 SM00382 ATPases associated with a variety of cellular activities BM527_08095 SM00634 Bacterial Ig-like domain (group 1) BM527_08105 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BM527_08105 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BM527_08105 SM00493 BM527_08105 BM527_08135 SM00448 cheY-homologous receiver domain BM527_08135 SM00862 Transcriptional regulatory protein, C terminal BM527_08140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_08140 SM00387 Histidine kinase-like ATPases BM527_08140 SM00388 His Kinase A (phosphoacceptor) domain BM527_08145 SM00587 ZnF_C4 abd HLH domain containing kinases domain BM527_08150 SM00316 Ribosomal protein S1-like RNA-binding domain BM527_08155 SM00363 S4 RNA-binding domain BM527_08190 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BM527_08195 SM00822 BM527_08195 BM527_08205 SM00825 Beta-ketoacyl synthase BM527_08225 SM00382 ATPases associated with a variety of cellular activities BM527_08245 SM00267 diguanylate cyclase BM527_08355 SM00448 cheY-homologous receiver domain BM527_08355 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM527_08365 SM00316 Ribosomal protein S1-like RNA-binding domain BM527_08390 SM01387 BM527_08390 BM527_08405 SM00363 S4 RNA-binding domain BM527_08420 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BM527_08425 SM00448 cheY-homologous receiver domain BM527_08485 SM00729 Elongator protein 3, MiaB family, Radical SAM BM527_08525 SM00382 ATPases associated with a variety of cellular activities BM527_08545 SM00267 diguanylate cyclase BM527_08585 SM00382 ATPases associated with a variety of cellular activities BM527_08620 SM00347 helix_turn_helix multiple antibiotic resistance protein BM527_08635 SM00028 Tetratricopeptide repeats BM527_08655 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM527_08680 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BM527_08685 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain BM527_08715 SM00357 Cold shock protein domain BM527_08725 SM00382 ATPases associated with a variety of cellular activities BM527_08725 SM01086 C-terminal, D2-small domain, of ClpB protein BM527_08730 SM00316 Ribosomal protein S1-like RNA-binding domain BM527_08775 SM00870 BM527_08775 BM527_08780 SM00729 Elongator protein 3, MiaB family, Radical SAM BM527_08795 SM00936 Penicillin-binding protein 5, C-terminal domain BM527_08860 SM00267 diguanylate cyclase BM527_08870 SM01103 BM527_08870 BM527_08880 SM00382 ATPases associated with a variety of cellular activities BM527_08910 SM00052 Putative diguanylate phosphodiesterase BM527_08910 SM00267 diguanylate cyclase BM527_08910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_08925 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BM527_08930 SM00046 Diacylglycerol kinase catalytic domain (presumed) BM527_08930 SM00195 Dual specificity phosphatase, catalytic domain BM527_08930 SM00404 Protein tyrosine phosphatase, catalytic domain motif BM527_08980 SM00507 HNH nucleases BM527_08985 SM00316 Ribosomal protein S1-like RNA-binding domain BM527_08985 SM00322 K homology RNA-binding domain BM527_09140 SM00028 Tetratricopeptide repeats BM527_09160 SM00771 ZipA, C-terminal domain (FtsZ-binding) BM527_09165 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BM527_09165 SM00292 breast cancer carboxy-terminal domain BM527_09165 SM00532 Ligase N family BM527_09175 SM00849 Metallo-beta-lactamase superfamily BM527_09180 SM00382 ATPases associated with a variety of cellular activities BM527_09205 SM00729 Elongator protein 3, MiaB family, Radical SAM BM527_09270 SM00861 Transketolase, pyrimidine binding domain BM527_09285 SM00881 CoA binding domain BM527_09340 SM00642 Alpha-amylase domain BM527_09345 SM00642 Alpha-amylase domain BM527_09355 SM00642 Alpha-amylase domain BM527_09360 SM00354 helix_turn _helix lactose operon repressor BM527_09470 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BM527_09485 SM00387 Histidine kinase-like ATPases BM527_09490 SM00448 cheY-homologous receiver domain BM527_09490 SM00850 LytTr DNA-binding domain BM527_09515 SM00028 Tetratricopeptide repeats BM527_09515 SM00448 cheY-homologous receiver domain BM527_09525 SM00450 Rhodanese Homology Domain BM527_09530 SM00054 EF-hand, calcium binding motif BM527_09540 SM00487 DEAD-like helicases superfamily BM527_09540 SM00490 helicase superfamily c-terminal domain BM527_09545 SM00882 Coenzyme A transferase BM527_09550 SM00882 Coenzyme A transferase BM527_09565 SM00387 Histidine kinase-like ATPases BM527_09610 SM00861 Transketolase, pyrimidine binding domain BM527_09625 SM00220 Serine/Threonine protein kinases, catalytic domain BM527_09660 SM00945 ProQ/FINO family BM527_09665 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BM527_09665 SM00245 tail specific protease BM527_09720 SM00981 BM527_09720 BM527_09730 SM00382 ATPases associated with a variety of cellular activities BM527_09875 SM00100 Cyclic nucleotide-monophosphate binding domain BM527_09875 SM00419 helix_turn_helix, cAMP Regulatory protein BM527_09920 SM00450 Rhodanese Homology Domain BM527_09930 SM01144 BM527_09930 BM527_09975 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BM527_09975 SM00465 GIY-YIG type nucleases (URI domain) BM527_09980 SM00421 helix_turn_helix, Lux Regulon BM527_09980 SM00448 cheY-homologous receiver domain BM527_10090 SM00382 ATPases associated with a variety of cellular activities BM527_10100 SM00843 BM527_10100 BM527_10105 SM00344 helix_turn_helix ASNC type BM527_10110 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BM527_10110 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BM527_10115 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BM527_10135 SM00411 bacterial (prokaryotic) histone like domain BM527_10140 SM00316 Ribosomal protein S1-like RNA-binding domain BM527_10160 SM00434 DNA Topoisomerase IV BM527_10185 SM00822 BM527_10185 BM527_10220 SM01130 BM527_10220 BM527_10305 SM00421 helix_turn_helix, Lux Regulon BM527_10305 SM00448 cheY-homologous receiver domain BM527_10335 SM00642 Alpha-amylase domain BM527_10345 SM00852 Probable molybdopterin binding domain BM527_10365 SM00382 ATPases associated with a variety of cellular activities BM527_10470 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BM527_10480 SM00563 Phosphate acyltransferases BM527_10520 SM00342 helix_turn_helix, arabinose operon control protein BM527_10555 SM00893 Electron transfer flavoprotein domain BM527_10560 SM00893 Electron transfer flavoprotein domain BM527_10570 SM00528 Domain in histone-like proteins of HNS family BM527_10590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_10590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_10605 SM00797 Allophanate hydrolase subunit 2 BM527_10610 SM00796 Allophanate hydrolase subunit 1 BM527_10660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM527_10665 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM527_10700 SM00829 Enoylreductase BM527_10715 SM00855 Phosphoglycerate mutase family BM527_10735 SM00729 Elongator protein 3, MiaB family, Radical SAM BM527_10740 SM00382 ATPases associated with a variety of cellular activities BM527_10770 SM00852 Probable molybdopterin binding domain BM527_10785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_10880 SM00530 Helix-turn-helix XRE-family like proteins BM527_10965 SM00530 Helix-turn-helix XRE-family like proteins BM527_11090 SM00422 helix_turn_helix, mercury resistance BM527_11135 SM00857 Resolvase, N terminal domain BM527_11175 SM00052 Putative diguanylate phosphodiesterase BM527_11175 SM00267 diguanylate cyclase BM527_11180 SM00849 Metallo-beta-lactamase superfamily BM527_11210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BM527_11215 SM00450 Rhodanese Homology Domain BM527_11230 SM00382 ATPases associated with a variety of cellular activities BM527_11230 SM00448 cheY-homologous receiver domain BM527_11240 SM00387 Histidine kinase-like ATPases BM527_11240 SM00388 His Kinase A (phosphoacceptor) domain BM527_11245 SM00448 cheY-homologous receiver domain BM527_11250 SM00387 Histidine kinase-like ATPases BM527_11250 SM00388 His Kinase A (phosphoacceptor) domain BM527_11250 SM00448 cheY-homologous receiver domain BM527_11320 SM00631 BM527_11320 BM527_11325 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM527_11340 SM01350 BM527_11340 BM527_11345 SM00642 Alpha-amylase domain BM527_11350 SM00642 Alpha-amylase domain BM527_11360 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BM527_11410 SM00749 bacterial OsmY and nodulation domain BM527_11440 SM00387 Histidine kinase-like ATPases BM527_11440 SM00388 His Kinase A (phosphoacceptor) domain BM527_11440 SM00448 cheY-homologous receiver domain BM527_11465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_11465 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_11500 SM00052 Putative diguanylate phosphodiesterase BM527_11500 SM00267 diguanylate cyclase BM527_11510 SM01060 BM527_11510 BM527_11515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM527_11520 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM527_11520 SM00387 Histidine kinase-like ATPases BM527_11560 SM00849 Metallo-beta-lactamase superfamily BM527_11565 SM00257 Lysin motif BM527_11575 SM00344 helix_turn_helix ASNC type BM527_11585 SM00840 BM527_11585 BM527_11600 SM00098 Alkaline phosphatase homologues BM527_11605 SM00098 Alkaline phosphatase homologues BM527_11620 SM00244 prohibitin homologues BM527_11625 SM00642 Alpha-amylase domain BM527_11635 SM00829 Enoylreductase BM527_11640 SM00829 Enoylreductase BM527_11710 SM00859 Semialdehyde dehydrogenase, NAD binding domain BM527_11720 SM01007 Class II Aldolase and Adducin N-terminal domain BM527_11725 SM00100 Cyclic nucleotide-monophosphate binding domain BM527_11725 SM00419 helix_turn_helix, cAMP Regulatory protein BM527_11735 SM00825 Beta-ketoacyl synthase BM527_11780 SM00829 Enoylreductase BM527_11785 SM00382 ATPases associated with a variety of cellular activities BM527_11800 SM00387 Histidine kinase-like ATPases BM527_11800 SM00388 His Kinase A (phosphoacceptor) domain BM527_11800 SM00448 cheY-homologous receiver domain BM527_11915 SM00345 helix_turn_helix gluconate operon transcriptional repressor BM527_11960 SM00341 Helicase and RNase D C-terminal BM527_11960 SM00474 3'-5' exonuclease BM527_11990 SM00487 DEAD-like helicases superfamily BM527_11990 SM00488 BM527_11990 BM527_11990 SM00491 BM527_11990 BM527_12020 SM00014 Acid phosphatase homologues BM527_12035 SM00642 Alpha-amylase domain BM527_12060 SM00849 Metallo-beta-lactamase superfamily BM527_12120 SM00894 Excalibur calcium-binding domain BM527_12130 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_12130 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_12175 SM00387 Histidine kinase-like ATPases BM527_12180 SM00493 BM527_12180 BM527_12190 SM00052 Putative diguanylate phosphodiesterase BM527_12190 SM00091 PAS domain BM527_12190 SM00267 diguanylate cyclase BM527_12190 SM00448 cheY-homologous receiver domain BM527_12195 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM527_12195 SM00448 cheY-homologous receiver domain BM527_12195 SM00911 HWE histidine kinase BM527_12215 SM00382 ATPases associated with a variety of cellular activities BM527_12280 SM00028 Tetratricopeptide repeats BM527_12290 SM00382 ATPases associated with a variety of cellular activities BM527_12290 SM01086 C-terminal, D2-small domain, of ClpB protein BM527_12300 SM00363 S4 RNA-binding domain BM527_12320 SM00464 Found in ATP-dependent protease La (LON) BM527_12370 SM00861 Transketolase, pyrimidine binding domain BM527_12425 SM00382 ATPases associated with a variety of cellular activities BM527_12435 SM00382 ATPases associated with a variety of cellular activities BM527_12470 SM00358 Double-stranded RNA binding motif BM527_12470 SM00535 Ribonuclease III family BM527_12480 SM00838 Elongation factor G C-terminus BM527_12535 SM00938 Nitrogen regulatory protein P-II BM527_12620 SM00904 Riboflavin kinase BM527_12655 SM00563 Phosphate acyltransferases BM527_12705 SM00411 bacterial (prokaryotic) histone like domain BM527_12710 SM00382 ATPases associated with a variety of cellular activities BM527_12710 SM00464 Found in ATP-dependent protease La (LON) BM527_12715 SM00382 ATPases associated with a variety of cellular activities BM527_12715 SM00994 ClpX C4-type zinc finger BM527_12715 SM01086 C-terminal, D2-small domain, of ClpB protein BM527_12770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_12780 SM00116 Domain in cystathionine beta-synthase and other proteins. BM527_12780 SM01240 BM527_12780 BM527_12795 SM00382 ATPases associated with a variety of cellular activities BM527_12800 SM00564 beta-propeller repeat BM527_12805 SM00028 Tetratricopeptide repeats BM527_12820 SM00530 Helix-turn-helix XRE-family like proteins BM527_12825 SM00028 Tetratricopeptide repeats BM527_12825 SM00257 Lysin motif BM527_12835 SM00562 BM527_12835 BM527_12865 SM00382 ATPases associated with a variety of cellular activities BM527_12895 SM00344 helix_turn_helix ASNC type BM527_12940 SM01323 BM527_12940 BM527_13005 SM00382 ATPases associated with a variety of cellular activities BM527_13025 SM00098 Alkaline phosphatase homologues BM527_13030 SM00260 Two component signalling adaptor domain BM527_13030 SM00448 cheY-homologous receiver domain BM527_13125 SM00028 Tetratricopeptide repeats BM527_13285 SM00382 ATPases associated with a variety of cellular activities BM527_13295 SM00465 GIY-YIG type nucleases (URI domain) BM527_13345 SM00052 Putative diguanylate phosphodiesterase BM527_13345 SM00267 diguanylate cyclase BM527_13355 SM00354 helix_turn _helix lactose operon repressor BM527_13380 SM00967 RNA 2'-O ribose methyltransferase substrate binding BM527_13435 SM00267 diguanylate cyclase BM527_13480 SM00267 diguanylate cyclase BM527_13540 SM01092 CO dehydrogenase flavoprotein C-terminal domain BM527_13545 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BM527_13585 SM00382 ATPases associated with a variety of cellular activities BM527_13630 SM00327 von Willebrand factor (vWF) type A domain BM527_13630 SM00609 Vault protein Inter-alpha-Trypsin domain BM527_13650 SM01322 BM527_13650 BM527_13690 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BM527_13690 SM01232 BM527_13690 BM527_13710 SM01321 BM527_13710 BM527_13715 SM00487 DEAD-like helicases superfamily BM527_13715 SM00490 helicase superfamily c-terminal domain BM527_13735 SM00028 Tetratricopeptide repeats BM527_13735 SM00387 Histidine kinase-like ATPases BM527_13735 SM00388 His Kinase A (phosphoacceptor) domain BM527_13735 SM00448 cheY-homologous receiver domain BM527_13745 SM00387 Histidine kinase-like ATPases BM527_13745 SM00388 His Kinase A (phosphoacceptor) domain BM527_13745 SM00448 cheY-homologous receiver domain BM527_13810 SM00729 Elongator protein 3, MiaB family, Radical SAM BM527_13865 SM01081 Putative carbohydrate binding domain BM527_13875 SM00354 helix_turn _helix lactose operon repressor BM527_13910 SM01011 Aminopeptidase P, N-terminal domain BM527_13935 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM527_13935 SM00387 Histidine kinase-like ATPases BM527_13935 SM00388 His Kinase A (phosphoacceptor) domain BM527_13935 SM00448 cheY-homologous receiver domain BM527_14010 SM00345 helix_turn_helix gluconate operon transcriptional repressor BM527_14010 SM00895 BM527_14010 BM527_14020 SM00644 BM527_14020 BM527_14070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_14075 SM00448 cheY-homologous receiver domain BM527_14090 SM00073 Histidine Phosphotransfer domain BM527_14090 SM00260 Two component signalling adaptor domain BM527_14090 SM00387 Histidine kinase-like ATPases BM527_14090 SM01231 BM527_14090 BM527_14095 SM00448 cheY-homologous receiver domain BM527_14100 SM00138 Methyltransferase, chemotaxis proteins BM527_14110 SM00448 cheY-homologous receiver domain BM527_14115 SM00260 Two component signalling adaptor domain BM527_14120 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_14130 SM00957 SecA DEAD-like domain BM527_14130 SM00958 SecA preprotein cross-linking domain BM527_14145 SM00864 Tubulin/FtsZ family, GTPase domain BM527_14145 SM00865 Tubulin/FtsZ family, C-terminal domain BM527_14150 SM00842 Cell division protein FtsA BM527_14275 SM00028 Tetratricopeptide repeats BM527_14275 SM00267 diguanylate cyclase BM527_14285 SM00382 ATPases associated with a variety of cellular activities BM527_14285 SM00448 cheY-homologous receiver domain BM527_14290 SM00387 Histidine kinase-like ATPases BM527_14330 SM00732 Likely ribonuclease with RNase H fold. BM527_14340 SM00382 ATPases associated with a variety of cellular activities BM527_14425 SM00360 RNA recognition motif BM527_14445 SM00986 Uracil DNA glycosylase superfamily BM527_14445 SM00987 UreE urease accessory protein, C-terminal domain BM527_14475 SM00829 Enoylreductase BM527_14490 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BM527_14495 SM00226 Low molecular weight phosphatase family BM527_14510 SM00448 cheY-homologous receiver domain BM527_14520 SM00448 cheY-homologous receiver domain BM527_14520 SM00862 Transcriptional regulatory protein, C terminal BM527_14525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_14525 SM00387 Histidine kinase-like ATPases BM527_14525 SM00388 His Kinase A (phosphoacceptor) domain BM527_14555 SM00342 helix_turn_helix, arabinose operon control protein BM527_14600 SM00749 bacterial OsmY and nodulation domain BM527_14625 SM00421 helix_turn_helix, Lux Regulon BM527_14625 SM00448 cheY-homologous receiver domain BM527_14645 SM00345 helix_turn_helix gluconate operon transcriptional repressor BM527_14645 SM00895 BM527_14645 BM527_14670 SM00267 diguanylate cyclase BM527_14670 SM00448 cheY-homologous receiver domain BM527_14690 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_14690 SM00091 PAS domain BM527_14690 SM00387 Histidine kinase-like ATPases BM527_14690 SM00388 His Kinase A (phosphoacceptor) domain BM527_14690 SM00448 cheY-homologous receiver domain BM527_14695 SM00287 Bacterial SH3 domain homologues BM527_14695 SM00644 BM527_14695 BM527_14740 SM00450 Rhodanese Homology Domain BM527_14900 SM00448 cheY-homologous receiver domain BM527_14910 SM01230 BM527_14910 BM527_14920 SM00091 PAS domain BM527_14920 SM00387 Histidine kinase-like ATPases BM527_14920 SM00388 His Kinase A (phosphoacceptor) domain BM527_14925 SM00382 ATPases associated with a variety of cellular activities BM527_14925 SM00448 cheY-homologous receiver domain BM527_14930 SM00073 Histidine Phosphotransfer domain BM527_14935 SM00563 Phosphate acyltransferases BM527_14955 SM00387 Histidine kinase-like ATPases BM527_14955 SM00388 His Kinase A (phosphoacceptor) domain BM527_14955 SM00448 cheY-homologous receiver domain BM527_14955 SM01358 BM527_14955 BM527_15050 SM00487 DEAD-like helicases superfamily BM527_15050 SM00490 helicase superfamily c-terminal domain BM527_15090 SM00382 ATPases associated with a variety of cellular activities BM527_15210 SM00421 helix_turn_helix, Lux Regulon BM527_15235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_15235 SM00091 PAS domain BM527_15235 SM00387 Histidine kinase-like ATPases BM527_15235 SM00388 His Kinase A (phosphoacceptor) domain BM527_15235 SM00448 cheY-homologous receiver domain BM527_15290 SM00849 Metallo-beta-lactamase superfamily BM527_15290 SM01027 Beta-Casp domain BM527_15310 SM00996 S-adenosyl-L-homocysteine hydrolase BM527_15310 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BM527_15315 SM00267 diguanylate cyclase BM527_15330 SM00564 beta-propeller repeat BM527_15335 SM00062 Bacterial periplasmic substrate-binding proteins BM527_15350 SM00382 ATPases associated with a variety of cellular activities BM527_15380 SM00729 Elongator protein 3, MiaB family, Radical SAM BM527_15405 SM00421 helix_turn_helix, Lux Regulon BM527_15405 SM00448 cheY-homologous receiver domain BM527_15410 SM00091 PAS domain BM527_15410 SM00387 Histidine kinase-like ATPases BM527_15410 SM00388 His Kinase A (phosphoacceptor) domain BM527_15410 SM00448 cheY-homologous receiver domain BM527_15415 SM00897 FIST N domain BM527_15415 SM01204 BM527_15415 BM527_15420 SM00900 BM527_15420 BM527_15430 SM00421 helix_turn_helix, Lux Regulon BM527_15430 SM00448 cheY-homologous receiver domain BM527_15470 SM00421 helix_turn_helix, Lux Regulon BM527_15470 SM00448 cheY-homologous receiver domain BM527_15475 SM00387 Histidine kinase-like ATPases BM527_15485 SM00487 DEAD-like helicases superfamily BM527_15485 SM00490 helicase superfamily c-terminal domain BM527_15490 SM00052 Putative diguanylate phosphodiesterase BM527_15490 SM00267 diguanylate cyclase BM527_15490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_15525 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_15525 SM00091 PAS domain BM527_15525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_15530 SM00155 Phospholipase D. Active site motifs. BM527_15560 SM00448 cheY-homologous receiver domain BM527_15570 SM00387 Histidine kinase-like ATPases BM527_15575 SM00849 Metallo-beta-lactamase superfamily BM527_15580 SM00486 DNA polymerase type-B family BM527_15620 SM00360 RNA recognition motif BM527_15660 SM00986 Uracil DNA glycosylase superfamily BM527_15660 SM00987 UreE urease accessory protein, C-terminal domain BM527_15665 SM00052 Putative diguanylate phosphodiesterase BM527_15665 SM00267 diguanylate cyclase BM527_15665 SM00448 cheY-homologous receiver domain BM527_15735 SM00173 Ras subfamily of RAS small GTPases BM527_15735 SM00175 Rab subfamily of small GTPases BM527_15740 SM00052 Putative diguanylate phosphodiesterase BM527_15740 SM00267 diguanylate cyclase BM527_15750 SM00563 Phosphate acyltransferases BM527_15755 SM00563 Phosphate acyltransferases BM527_15880 SM00052 Putative diguanylate phosphodiesterase BM527_15880 SM00267 diguanylate cyclase BM527_15900 SM00849 Metallo-beta-lactamase superfamily BM527_15940 SM00530 Helix-turn-helix XRE-family like proteins BM527_15960 SM00903 Flavin reductase like domain BM527_15995 SM00100 Cyclic nucleotide-monophosphate binding domain BM527_16015 SM00849 Metallo-beta-lactamase superfamily BM527_16065 SM00900 BM527_16065 BM527_16150 SM00028 Tetratricopeptide repeats BM527_16155 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BM527_16165 SM00267 diguanylate cyclase BM527_16165 SM00448 cheY-homologous receiver domain BM527_16170 SM00479 BM527_16170 BM527_16175 SM00116 Domain in cystathionine beta-synthase and other proteins. BM527_16190 SM00387 Histidine kinase-like ATPases BM527_16190 SM00388 His Kinase A (phosphoacceptor) domain BM527_16190 SM00448 cheY-homologous receiver domain BM527_16220 SM00421 helix_turn_helix, Lux Regulon BM527_16220 SM00448 cheY-homologous receiver domain BM527_16245 SM01358 BM527_16245 BM527_16260 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM527_16260 SM00240 Forkhead associated domain BM527_16265 SM00028 Tetratricopeptide repeats BM527_16265 SM00220 Serine/Threonine protein kinases, catalytic domain BM527_16270 SM00387 Histidine kinase-like ATPases BM527_16275 SM00421 helix_turn_helix, Lux Regulon BM527_16275 SM00448 cheY-homologous receiver domain BM527_16370 SM00984 UDP binding domain BM527_16420 SM00191 Integrin alpha (beta-propellor repeats). BM527_16535 SM00382 ATPases associated with a variety of cellular activities BM527_16570 SM00382 ATPases associated with a variety of cellular activities BM527_16645 SM00028 Tetratricopeptide repeats BM527_16700 SM00662 RNA polymerases D BM527_16705 SM00363 S4 RNA-binding domain BM527_16705 SM01390 BM527_16705 BM527_16770 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BM527_16775 SM01374 BM527_16775 BM527_16795 SM00967 RNA 2'-O ribose methyltransferase substrate binding BM527_16800 SM00316 Ribosomal protein S1-like RNA-binding domain BM527_16800 SM00357 Cold shock protein domain BM527_16800 SM00955 BM527_16800 BM527_16835 SM00671 Sel1-like repeats. BM527_16865 SM00387 Histidine kinase-like ATPases BM527_16865 SM00388 His Kinase A (phosphoacceptor) domain BM527_16865 SM00448 cheY-homologous receiver domain BM527_16885 SM00344 helix_turn_helix ASNC type BM527_16895 SM00357 Cold shock protein domain BM527_16925 SM00448 cheY-homologous receiver domain BM527_16935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_16935 SM00387 Histidine kinase-like ATPases BM527_16935 SM00388 His Kinase A (phosphoacceptor) domain BM527_16940 SM00448 cheY-homologous receiver domain BM527_16950 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BM527_17010 SM00421 helix_turn_helix, Lux Regulon BM527_17035 SM00382 ATPases associated with a variety of cellular activities BM527_17035 SM01086 C-terminal, D2-small domain, of ClpB protein BM527_17060 SM00487 DEAD-like helicases superfamily BM527_17060 SM00490 helicase superfamily c-terminal domain BM527_17075 SM00919 Malic enzyme, NAD binding domain BM527_17075 SM01274 BM527_17075 BM527_17125 SM00052 Putative diguanylate phosphodiesterase BM527_17140 SM00382 ATPases associated with a variety of cellular activities BM527_17145 SM00382 ATPases associated with a variety of cellular activities BM527_17145 SM00962 SRP54-type protein, GTPase domain BM527_17145 SM00963 SRP54-type protein, helical bundle domain BM527_17215 SM00052 Putative diguanylate phosphodiesterase BM527_17230 SM00382 ATPases associated with a variety of cellular activities BM527_17235 SM00448 cheY-homologous receiver domain BM527_17235 SM00862 Transcriptional regulatory protein, C terminal BM527_17240 SM00387 Histidine kinase-like ATPases BM527_17240 SM00388 His Kinase A (phosphoacceptor) domain BM527_17250 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BM527_17275 SM00116 Domain in cystathionine beta-synthase and other proteins. BM527_17315 SM00838 Elongation factor G C-terminus BM527_17315 SM00889 Elongation factor G, domain IV BM527_17330 SM00663 RNA polymerase I subunit A N-terminus BM527_17355 SM00649 Ribosomal protein L11/L12 BM527_17365 SM00267 diguanylate cyclase BM527_17370 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BM527_17370 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BM527_17385 SM00382 ATPases associated with a variety of cellular activities BM527_17410 SM00487 DEAD-like helicases superfamily BM527_17410 SM00490 helicase superfamily c-terminal domain BM527_17450 SM00642 Alpha-amylase domain BM527_17490 SM00487 DEAD-like helicases superfamily BM527_17490 SM00490 helicase superfamily c-terminal domain BM527_17505 SM00849 Metallo-beta-lactamase superfamily BM527_17515 SM00841 Elongation factor P, C-terminal BM527_17515 SM01185 BM527_17515 BM527_17590 SM00244 prohibitin homologues BM527_17595 SM00244 prohibitin homologues BM527_17615 SM01340 BM527_17615 BM527_17620 SM00257 Lysin motif BM527_17620 SM00646 BM527_17620 BM527_17680 SM00382 ATPases associated with a variety of cellular activities BM527_17735 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM527_17735 SM00387 Histidine kinase-like ATPases BM527_17735 SM00388 His Kinase A (phosphoacceptor) domain BM527_17745 SM00382 ATPases associated with a variety of cellular activities BM527_17755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_17760 SM00387 Histidine kinase-like ATPases BM527_17765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_17795 SM00345 helix_turn_helix gluconate operon transcriptional repressor BM527_17795 SM00866 BM527_17795 BM527_17830 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BM527_17860 SM00267 diguanylate cyclase BM527_17880 SM00354 helix_turn _helix lactose operon repressor BM527_17890 SM00382 ATPases associated with a variety of cellular activities BM527_17895 SM00382 ATPases associated with a variety of cellular activities BM527_17920 SM00382 ATPases associated with a variety of cellular activities BM527_18015 SM00267 diguanylate cyclase BM527_18060 SM00116 Domain in cystathionine beta-synthase and other proteins. BM527_18075 SM00867 YceI-like domain BM527_18105 SM00829 Enoylreductase BM527_18110 SM00267 diguanylate cyclase BM527_18115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_18115 SM00387 Histidine kinase-like ATPases BM527_18115 SM00388 His Kinase A (phosphoacceptor) domain BM527_18115 SM00448 cheY-homologous receiver domain BM527_18135 SM00420 helix_turn_helix, Deoxyribose operon repressor BM527_18135 SM01134 BM527_18135 BM527_18150 SM00267 diguanylate cyclase BM527_18165 SM00342 helix_turn_helix, arabinose operon control protein BM527_18165 SM01009 AlkA N-terminal domain BM527_18195 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BM527_18195 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BM527_18215 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_18215 SM00091 PAS domain BM527_18215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BM527_18215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_18225 SM00883 Chaperonin 10 Kd subunit BM527_18260 SM00878 Biotin carboxylase C-terminal domain BM527_18280 SM00479 BM527_18280 BM527_18280 SM00990 BM527_18280 BM527_18290 SM00903 Flavin reductase like domain BM527_18305 SM00062 Bacterial periplasmic substrate-binding proteins BM527_18325 SM00798 AICARFT/IMPCHase bienzyme BM527_18325 SM00851 MGS-like domain BM527_18335 SM01209 BM527_18335 BM527_18335 SM01210 BM527_18335 BM527_18360 SM00448 cheY-homologous receiver domain BM527_18360 SM00862 Transcriptional regulatory protein, C terminal BM527_18365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BM527_18365 SM00387 Histidine kinase-like ATPases BM527_18365 SM00388 His Kinase A (phosphoacceptor) domain BM527_18390 SM00363 S4 RNA-binding domain BM527_18405 SM00382 ATPases associated with a variety of cellular activities BM527_18490 SM00867 YceI-like domain BM527_18525 SM00382 ATPases associated with a variety of cellular activities BM527_18545 SM00320 WD40 repeats BM527_18565 SM00316 Ribosomal protein S1-like RNA-binding domain BM527_18565 SM00732 Likely ribonuclease with RNase H fold. BM527_18595 SM00631 BM527_18595 BM527_18695 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BM527_18695 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BM527_18695 SM00091 PAS domain BM527_18695 SM00267 diguanylate cyclase BM527_18700 SM00563 Phosphate acyltransferases BM527_18720 SM00382 ATPases associated with a variety of cellular activities BM527_18785 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BM527_18895 SM00354 helix_turn _helix lactose operon repressor BM527_18910 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BM527_18920 SM01144 BM527_18920 BM527_18940 SM00382 ATPases associated with a variety of cellular activities BM527_18980 SM00470 ParB-like nuclease domain BM527_18995 SM01228 BM527_18995