locus-tag class description DS731_00005 PF00308 Bacterial dnaA protein DS731_00005 PF11638 DnaA N-terminal domain DS731_00005 PF08299 Bacterial dnaA protein helix-turn-helix DS731_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DS731_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DS731_00010 PF02767 DNA polymerase III beta subunit, central domain DS731_00015 PF02463 RecF/RecN/SMC N terminal domain DS731_00020 PF00204 DNA gyrase B DS731_00020 PF01751 Toprim domain DS731_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_00020 PF18053 DNA gyrase B subunit insert domain DS731_00020 PF00986 DNA gyrase B subunit, carboxyl terminus DS731_00035 PF02092 Glycyl-tRNA synthetase beta subunit DS731_00035 PF05746 DALR anticodon binding domain DS731_00040 PF02091 Glycyl-tRNA synthetase alpha subunit DS731_00045 PF03352 Methyladenine glycosylase DS731_00055 PF04220 Der GTPase activator (YihI) DS731_00065 PF00034 Cytochrome c DS731_00070 PF01926 50S ribosome-binding GTPase DS731_00075 PF00476 DNA polymerase family A DS731_00075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DS731_00075 PF01367 5'-3' exonuclease, C-terminal SAM fold DS731_00075 PF01612 3'-5' exonuclease DS731_00085 PF02386 Cation transport protein DS731_00090 PF02254 TrkA-N domain DS731_00090 PF02080 TrkA-C domain DS731_00095 PF01189 16S rRNA methyltransferase RsmB/F DS731_00095 PF01029 NusB family DS731_00100 PF00551 Formyl transferase DS731_00100 PF02911 Formyl transferase, C-terminal domain DS731_00105 PF01327 Polypeptide deformylase DS731_00110 PF01476 LysM domain DS731_00115 PF17782 DprA winged helix domain DS731_00115 PF02481 DNA recombination-mediator protein A DS731_00120 PF04361 Protein of unknown function (DUF494) DS731_00125 PF01396 Topoisomerase DNA binding C4 zinc finger DS731_00130 PF01300 Telomere recombination DS731_00135 PF01218 Coproporphyrinogen III oxidase DS731_00140 PF03922 OmpW family DS731_00150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DS731_00150 PF01488 Shikimate / quinate 5-dehydrogenase DS731_00150 PF08501 Shikimate dehydrogenase substrate binding domain DS731_00155 PF00132 Bacterial transferase hexapeptide (six repeats) DS731_00205 PF09411 Lipid A 3-O-deacylase (PagL) DS731_00210 PF01336 OB-fold nucleic acid binding domain DS731_00210 PF02811 PHP domain DS731_00210 PF14579 Helix-hairpin-helix motif DS731_00210 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DS731_00210 PF07733 Bacterial DNA polymerase III alpha NTPase domain DS731_00245 PF00440 Bacterial regulatory proteins, tetR family DS731_00250 PF04127 DNA / pantothenate metabolism flavoprotein DS731_00250 PF02441 Flavoprotein DS731_00255 PF04002 RadC-like JAB domain DS731_00275 PF06082 Exopolysaccharide biosynthesis protein YbjH DS731_00280 PF00830 Ribosomal L28 family DS731_00285 PF00471 Ribosomal protein L33 DS731_00295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DS731_00295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DS731_00295 PF06827 Zinc finger found in FPG and IleRS DS731_00300 PF01467 Cytidylyltransferase-like DS731_00310 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DS731_00325 PF03707 Bacterial signalling protein N terminal repeat DS731_00325 PF00990 Diguanylate cyclase, GGDEF domain DS731_00325 PF00563 EAL domain DS731_00330 PF00155 Aminotransferase class I and II DS731_00335 PF08240 Alcohol dehydrogenase GroES-like domain DS731_00335 PF00107 Zinc-binding dehydrogenase DS731_00340 PF00581 Rhodanese-like domain DS731_00345 PF01694 Rhomboid family DS731_00345 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease DS731_00355 PF04345 Chorismate lyase DS731_00360 PF01040 UbiA prenyltransferase family DS731_00365 PF04380 Membrane fusogenic activity DS731_00370 PF13361 UvrD-like helicase C-terminal domain DS731_00370 PF00580 UvrD/REP helicase N-terminal domain DS731_00375 PF00990 Diguanylate cyclase, GGDEF domain DS731_00375 PF00563 EAL domain DS731_00375 PF03707 Bacterial signalling protein N terminal repeat DS731_00380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DS731_00390 PF00535 Glycosyl transferase family 2 DS731_00400 PF13439 Glycosyltransferase Family 4 DS731_00400 PF00534 Glycosyl transferases group 1 DS731_00470 PF16124 RecQ zinc-binding DS731_00470 PF00570 HRDC domain DS731_00470 PF00271 Helicase conserved C-terminal domain DS731_00470 PF00270 DEAD/DEAH box helicase DS731_00470 PF09382 RQC domain DS731_00475 PF00176 SNF2 family N-terminal domain DS731_00475 PF18339 RapA N-terminal Tudor like domain 1 DS731_00475 PF12137 RNA polymerase recycling family C-terminal DS731_00475 PF00271 Helicase conserved C-terminal domain DS731_00475 PF18337 RapA N-terminal Tudor like domain DS731_00495 PF06508 Queuosine biosynthesis protein QueC DS731_00515 PF01242 6-pyruvoyl tetrahydropterin synthase DS731_00575 PF00355 Rieske [2Fe-2S] domain DS731_00580 PF00175 Oxidoreductase NAD-binding domain DS731_00580 PF00111 2Fe-2S iron-sulfur cluster binding domain DS731_00590 PF00535 Glycosyl transferase family 2 DS731_00595 PF00535 Glycosyl transferase family 2 DS731_00600 PF12833 Helix-turn-helix domain DS731_00600 PF06719 AraC-type transcriptional regulator N-terminus DS731_00605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_00605 PF03466 LysR substrate binding domain DS731_00610 PF07690 Major Facilitator Superfamily DS731_00615 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_00615 PF00512 His Kinase A (phospho-acceptor) domain DS731_00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_00625 PF00248 Aldo/keto reductase family DS731_00630 PF12706 Beta-lactamase superfamily domain DS731_00635 PF00593 TonB dependent receptor DS731_00635 PF07715 TonB-dependent Receptor Plug Domain DS731_00640 PF00703 Glycosyl hydrolases family 2 DS731_00640 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DS731_00640 PF02929 Beta galactosidase small chain DS731_00640 PF02837 Glycosyl hydrolases family 2, sugar binding domain DS731_00640 PF16353 Domain of unknown function(DUF4981) DS731_00650 PF00557 Metallopeptidase family M24 DS731_00665 PF00933 Glycosyl hydrolase family 3 N terminal domain DS731_00675 PF07715 TonB-dependent Receptor Plug Domain DS731_00675 PF00593 TonB dependent receptor DS731_00685 PF08220 DeoR-like helix-turn-helix domain DS731_00685 PF00455 DeoR C terminal sensor domain DS731_00690 PF00596 Class II Aldolase and Adducin N-terminal domain DS731_00695 PF01261 Xylose isomerase-like TIM barrel DS731_00700 PF01070 FMN-dependent dehydrogenase DS731_00705 PF06379 L-rhamnose-proton symport protein (RhaT) DS731_00735 PF00005 ABC transporter DS731_00745 PF13520 Amino acid permease DS731_00755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_00755 PF03466 LysR substrate binding domain DS731_00765 PF00440 Bacterial regulatory proteins, tetR family DS731_00790 PF00732 GMC oxidoreductase DS731_00790 PF05199 GMC oxidoreductase DS731_00820 PF13407 Periplasmic binding protein domain DS731_00820 PF00356 Bacterial regulatory proteins, lacI family DS731_00830 PF07715 TonB-dependent Receptor Plug Domain DS731_00830 PF00593 TonB dependent receptor DS731_00860 PF07715 TonB-dependent Receptor Plug Domain DS731_00860 PF00593 TonB dependent receptor DS731_00880 PF07690 Major Facilitator Superfamily DS731_00900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_00900 PF03466 LysR substrate binding domain DS731_00905 PF01494 FAD binding domain DS731_00915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DS731_00920 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) DS731_00940 PF00732 GMC oxidoreductase DS731_00940 PF05199 GMC oxidoreductase DS731_00945 PF07690 Major Facilitator Superfamily DS731_00950 PF00593 TonB dependent receptor DS731_00950 PF07715 TonB-dependent Receptor Plug Domain DS731_00955 PF13599 Pentapeptide repeats (9 copies) DS731_00960 PF00593 TonB dependent receptor DS731_00960 PF07715 TonB-dependent Receptor Plug Domain DS731_00965 PF00135 Carboxylesterase family DS731_00975 PF00376 MerR family regulatory protein DS731_00975 PF09278 MerR, DNA binding DS731_01000 PF00586 AIR synthase related protein, N-terminal domain DS731_01000 PF02769 AIR synthase related protein, C-terminal domain DS731_01015 PF00795 Carbon-nitrogen hydrolase DS731_01025 PF00155 Aminotransferase class I and II DS731_01025 PF00392 Bacterial regulatory proteins, gntR family DS731_01030 PF13746 4Fe-4S dicluster domain DS731_01030 PF12801 4Fe-4S binding domain DS731_01030 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DS731_01035 PF00392 Bacterial regulatory proteins, gntR family DS731_01035 PF00155 Aminotransferase class I and II DS731_01040 PF01654 Cytochrome bd terminal oxidase subunit I DS731_01045 PF02322 Cytochrome bd terminal oxidase subunit II DS731_01055 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DS731_01055 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DS731_01070 PF07690 Major Facilitator Superfamily DS731_01080 PF05199 GMC oxidoreductase DS731_01080 PF00732 GMC oxidoreductase DS731_01095 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DS731_01095 PF04616 Glycosyl hydrolases family 43 DS731_01105 PF14310 Fibronectin type III-like domain DS731_01105 PF00933 Glycosyl hydrolase family 3 N terminal domain DS731_01105 PF01915 Glycosyl hydrolase family 3 C-terminal domain DS731_01115 PF07715 TonB-dependent Receptor Plug Domain DS731_01115 PF00593 TonB dependent receptor DS731_01120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_01120 PF03466 LysR substrate binding domain DS731_01125 PF00893 Small Multidrug Resistance protein DS731_01130 PF03466 LysR substrate binding domain DS731_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_01140 PF04199 Putative cyclase DS731_01150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DS731_01160 PF01494 FAD binding domain DS731_01165 PF07715 TonB-dependent Receptor Plug Domain DS731_01165 PF00593 TonB dependent receptor DS731_01170 PF07715 TonB-dependent Receptor Plug Domain DS731_01170 PF00593 TonB dependent receptor DS731_01175 PF07519 Tannase and feruloyl esterase DS731_01180 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DS731_01180 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit DS731_01185 PF07690 Major Facilitator Superfamily DS731_01190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_01190 PF03466 LysR substrate binding domain DS731_01200 PF01261 Xylose isomerase-like TIM barrel DS731_01205 PF01261 Xylose isomerase-like TIM barrel DS731_01215 PF01261 Xylose isomerase-like TIM barrel DS731_01230 PF16347 Domain of unknown function (DUF4976) DS731_01230 PF00884 Sulfatase DS731_01235 PF07729 FCD domain DS731_01235 PF00392 Bacterial regulatory proteins, gntR family DS731_01240 PF00672 HAMP domain DS731_01240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_01240 PF12729 Four helix bundle sensory module for signal transduction DS731_01255 PF00593 TonB dependent receptor DS731_01255 PF07715 TonB-dependent Receptor Plug Domain DS731_01265 PF00593 TonB dependent receptor DS731_01265 PF07715 TonB-dependent Receptor Plug Domain DS731_01280 PF16916 Dimerisation domain of Zinc Transporter DS731_01280 PF01545 Cation efflux family DS731_01295 PF00528 Binding-protein-dependent transport system inner membrane component DS731_01300 PF08402 TOBE domain DS731_01300 PF00005 ABC transporter DS731_01305 PF01717 Cobalamin-independent synthase, Catalytic domain DS731_01305 PF08267 Cobalamin-independent synthase, N-terminal domain DS731_01350 PF09055 Nickel-containing superoxide dismutase DS731_01360 PF00512 His Kinase A (phospho-acceptor) domain DS731_01360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_01360 PF16736 Single Cache-like DS731_01360 PF00989 PAS fold DS731_01365 PF00206 Lyase DS731_01365 PF10415 Fumarase C C-terminus DS731_01375 PF00127 Copper binding proteins, plastocyanin/azurin family DS731_01380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_01380 PF03466 LysR substrate binding domain DS731_01390 PF01494 FAD binding domain DS731_01405 PF01557 Fumarylacetoacetate (FAA) hydrolase family DS731_01410 PF00135 Carboxylesterase family DS731_01415 PF00512 His Kinase A (phospho-acceptor) domain DS731_01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_01415 PF00672 HAMP domain DS731_01420 PF00072 Response regulator receiver domain DS731_01420 PF00486 Transcriptional regulatory protein, C terminal DS731_01425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_01425 PF00529 HlyD membrane-fusion protein of T1SS DS731_01430 PF00873 AcrB/AcrD/AcrF family DS731_01435 PF00893 Small Multidrug Resistance protein DS731_01445 PF00232 Glycosyl hydrolase family 1 DS731_01460 PF07715 TonB-dependent Receptor Plug Domain DS731_01460 PF00593 TonB dependent receptor DS731_01465 PF12833 Helix-turn-helix domain DS731_01465 PF02311 AraC-like ligand binding domain DS731_01470 PF04909 Amidohydrolase DS731_01475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DS731_01480 PF00248 Aldo/keto reductase family DS731_01490 PF04616 Glycosyl hydrolases family 43 DS731_01490 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DS731_01495 PF00884 Sulfatase DS731_01505 PF03466 LysR substrate binding domain DS731_01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_01510 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DS731_01525 PF02566 OsmC-like protein DS731_01530 PF01047 MarR family DS731_01535 PF12729 Four helix bundle sensory module for signal transduction DS731_01535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_01535 PF00672 HAMP domain DS731_01545 PF02661 Fic/DOC family DS731_01545 PF12728 Helix-turn-helix domain DS731_01550 PF01565 FAD binding domain DS731_01550 PF09330 D-lactate dehydrogenase, membrane binding DS731_01575 PF13533 Biotin-lipoyl like DS731_01580 PF04632 Fusaric acid resistance protein family DS731_01585 PF03786 D-mannonate dehydratase (UxuA) DS731_01590 PF03466 LysR substrate binding domain DS731_01590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_01600 PF07690 Major Facilitator Superfamily DS731_01605 PF01979 Amidohydrolase family DS731_01610 PF01380 SIS domain DS731_01615 PF01869 BadF/BadG/BcrA/BcrD ATPase family DS731_01640 PF01546 Peptidase family M20/M25/M40 DS731_01640 PF07687 Peptidase dimerisation domain DS731_01645 PF00293 NUDIX domain DS731_01645 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DS731_01645 PF09297 NADH pyrophosphatase zinc ribbon domain DS731_01650 PF02447 GntP family permease DS731_01655 PF01202 Shikimate kinase DS731_01660 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DS731_01660 PF00356 Bacterial regulatory proteins, lacI family DS731_01675 PF04317 YcjX-like family, DUF463 DS731_01685 PF05552 Conserved TM helix DS731_01685 PF00924 Mechanosensitive ion channel DS731_01705 PF13614 AAA domain DS731_01730 PF13439 Glycosyltransferase Family 4 DS731_01730 PF00534 Glycosyl transferases group 1 DS731_01755 PF00149 Calcineurin-like phosphoesterase DS731_01760 PF06865 Pyrimidine/purine nucleoside phosphorylase DS731_01770 PF01095 Pectinesterase DS731_01775 PF00295 Glycosyl hydrolases family 28 DS731_01785 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DS731_01785 PF04616 Glycosyl hydrolases family 43 DS731_01790 PF07470 Glycosyl Hydrolase Family 88 DS731_01795 PF00593 TonB dependent receptor DS731_01795 PF07715 TonB-dependent Receptor Plug Domain DS731_01800 PF13472 GDSL-like Lipase/Acylhydrolase family DS731_01810 PF07715 TonB-dependent Receptor Plug Domain DS731_01810 PF00593 TonB dependent receptor DS731_01830 PF00294 pfkB family carbohydrate kinase DS731_01835 PF01081 KDPG and KHG aldolase DS731_01840 PF08125 Mannitol dehydrogenase C-terminal domain DS731_01840 PF01232 Mannitol dehydrogenase Rossmann domain DS731_01845 PF02614 Glucuronate isomerase DS731_01850 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DS731_01850 PF08666 SAF domain DS731_01855 PF00356 Bacterial regulatory proteins, lacI family DS731_01860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DS731_01865 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DS731_01870 PF03480 Bacterial extracellular solute-binding protein, family 7 DS731_01875 PF04962 KduI/IolB family DS731_01890 PF06968 Biotin and Thiamin Synthesis associated domain DS731_01890 PF04055 Radical SAM superfamily DS731_01895 PF05690 Thiazole biosynthesis protein ThiG DS731_01905 PF00899 ThiF family DS731_01910 PF02581 Thiamine monophosphate synthase DS731_01915 PF13667 ThiC-associated domain DS731_01915 PF01964 Radical SAM ThiC family DS731_01925 PF07670 Nucleoside recognition DS731_01925 PF07664 Ferrous iron transport protein B C terminus DS731_01925 PF02421 Ferrous iron transport protein B DS731_01935 PF08281 Sigma-70, region 4 DS731_01935 PF04542 Sigma-70 region 2 DS731_01940 PF07715 TonB-dependent Receptor Plug Domain DS731_01940 PF00593 TonB dependent receptor DS731_01945 PF01979 Amidohydrolase family DS731_01955 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase DS731_01960 PF02602 Uroporphyrinogen-III synthase HemD DS731_01965 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DS731_01965 PF03900 Porphobilinogen deaminase, C-terminal domain DS731_01975 PF00625 Guanylate kinase DS731_01980 PF01192 RNA polymerase Rpb6 DS731_01985 PF13291 ACT domain DS731_01985 PF02824 TGS domain DS731_01985 PF04607 Region found in RelA / SpoT proteins DS731_01990 PF01042 Endoribonuclease L-PSP DS731_02000 PF17191 RecG wedge domain DS731_02000 PF00271 Helicase conserved C-terminal domain DS731_02000 PF00270 DEAD/DEAH box helicase DS731_02005 PF04445 Putative SAM-dependent methyltransferase DS731_02010 PF08534 Redoxin DS731_02015 PF00196 Bacterial regulatory proteins, luxR family DS731_02040 PF04304 Protein of unknown function (DUF454) DS731_02045 PF00226 DnaJ domain DS731_02045 PF00684 DnaJ central domain DS731_02045 PF01556 DnaJ C terminal domain DS731_02050 PF00440 Bacterial regulatory proteins, tetR family DS731_02050 PF08361 MAATS-type transcriptional repressor, C-terminal region DS731_02055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_02055 PF00529 HlyD membrane-fusion protein of T1SS DS731_02060 PF00873 AcrB/AcrD/AcrF family DS731_02065 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DS731_02065 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DS731_02070 PF00850 Histone deacetylase domain DS731_02080 PF00672 HAMP domain DS731_02080 PF12729 Four helix bundle sensory module for signal transduction DS731_02080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_02085 PF01544 CorA-like Mg2+ transporter protein DS731_02100 PF11737 Protein of unknown function (DUF3300) DS731_02105 PF00925 GTP cyclohydrolase II DS731_02110 PF00563 EAL domain DS731_02110 PF08448 PAS fold DS731_02110 PF00990 Diguanylate cyclase, GGDEF domain DS731_02120 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DS731_02130 PF00271 Helicase conserved C-terminal domain DS731_02130 PF00270 DEAD/DEAH box helicase DS731_02130 PF16124 RecQ zinc-binding DS731_02130 PF00570 HRDC domain DS731_02130 PF09382 RQC domain DS731_02135 PF03448 MgtE intracellular N domain DS731_02135 PF01769 Divalent cation transporter DS731_02135 PF00571 CBS domain DS731_02140 PF00892 EamA-like transporter family DS731_02145 PF00990 Diguanylate cyclase, GGDEF domain DS731_02145 PF07694 5TMR of 5TMR-LYT DS731_02150 PF13361 UvrD-like helicase C-terminal domain DS731_02150 PF00580 UvrD/REP helicase N-terminal domain DS731_02160 PF03631 Virulence factor BrkB DS731_02165 PF05532 CsbD-like DS731_02170 PF00132 Bacterial transferase hexapeptide (six repeats) DS731_02170 PF06426 Serine acetyltransferase, N-terminal DS731_02175 PF13419 Haloacid dehalogenase-like hydrolase DS731_02180 PF00589 Phage integrase family DS731_02180 PF02899 Phage integrase, N-terminal SAM-like domain DS731_02190 PF01678 Diaminopimelate epimerase DS731_02195 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DS731_02195 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DS731_02210 PF01569 PAP2 superfamily DS731_02215 PF03737 Aldolase/RraA DS731_02225 PF02441 Flavoprotein DS731_02230 PF01225 Mur ligase family, catalytic domain DS731_02230 PF02875 Mur ligase family, glutamate ligase domain DS731_02230 PF08245 Mur ligase middle domain DS731_02235 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DS731_02240 PF00719 Inorganic pyrophosphatase DS731_02245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_02245 PF00512 His Kinase A (phospho-acceptor) domain DS731_02250 PF08447 PAS fold DS731_02250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_02260 PF00717 Peptidase S24-like DS731_02265 PF00817 impB/mucB/samB family DS731_02265 PF13438 Domain of unknown function (DUF4113) DS731_02265 PF11799 impB/mucB/samB family C-terminal domain DS731_02265 PF11798 IMS family HHH motif DS731_02275 PF00072 Response regulator receiver domain DS731_02275 PF00512 His Kinase A (phospho-acceptor) domain DS731_02275 PF13426 PAS domain DS731_02275 PF08448 PAS fold DS731_02275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_02280 PF03466 LysR substrate binding domain DS731_02280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_02295 PF00909 Ammonium Transporter Family DS731_02300 PF00892 EamA-like transporter family DS731_02305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_02305 PF03466 LysR substrate binding domain DS731_02315 PF01339 CheB methylesterase DS731_02315 PF00072 Response regulator receiver domain DS731_02320 PF08448 PAS fold DS731_02320 PF01739 CheR methyltransferase, SAM binding domain DS731_02320 PF03705 CheR methyltransferase, all-alpha domain DS731_02320 PF01339 CheB methylesterase DS731_02330 PF02107 Flagellar L-ring protein DS731_02340 PF00437 Type II/IV secretion system protein DS731_02345 PF00338 Ribosomal protein S10p/S20e DS731_02350 PF00297 Ribosomal protein L3 DS731_02355 PF00573 Ribosomal protein L4/L1 family DS731_02360 PF00276 Ribosomal protein L23 DS731_02365 PF00181 Ribosomal Proteins L2, RNA binding domain DS731_02365 PF03947 Ribosomal Proteins L2, C-terminal domain DS731_02370 PF00203 Ribosomal protein S19 DS731_02375 PF00237 Ribosomal protein L22p/L17e DS731_02380 PF07650 KH domain DS731_02380 PF00189 Ribosomal protein S3, C-terminal domain DS731_02385 PF00252 Ribosomal protein L16p/L10e DS731_02390 PF00831 Ribosomal L29 protein DS731_02395 PF00366 Ribosomal protein S17 DS731_02405 PF03473 MOSC domain DS731_02425 PF03796 DnaB-like helicase C terminal domain DS731_02425 PF00772 DnaB-like helicase N terminal domain DS731_02430 PF00691 OmpA family DS731_02430 PF05736 OprF membrane domain DS731_02435 PF01894 Uncharacterised protein family UPF0047 DS731_02445 PF01475 Ferric uptake regulator family DS731_02450 PF09297 NADH pyrophosphatase zinc ribbon domain DS731_02450 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain DS731_02450 PF00293 NUDIX domain DS731_02455 PF01208 Uroporphyrinogen decarboxylase (URO-D) DS731_02460 PF08331 Domain of unknown function (DUF1730) DS731_02465 PF01256 Carbohydrate kinase DS731_02465 PF03853 YjeF-related protein N-terminus DS731_02470 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DS731_02475 PF01520 N-acetylmuramoyl-L-alanine amidase DS731_02480 PF08676 MutL C terminal dimerisation domain DS731_02480 PF01119 DNA mismatch repair protein, C-terminal domain DS731_02490 PF17209 Hfq protein DS731_02495 PF13167 GTP-binding GTPase N-terminal DS731_02495 PF01926 50S ribosome-binding GTPase DS731_02495 PF16360 GTP-binding GTPase Middle Region DS731_02500 PF01145 SPFH domain / Band 7 family DS731_02500 PF12221 Bacterial membrane protein N terminal DS731_02505 PF01145 SPFH domain / Band 7 family DS731_02510 PF03806 AbgT putative transporter family DS731_02515 PF00762 Ferrochelatase DS731_02525 PF00205 Thiamine pyrophosphate enzyme, central domain DS731_02525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DS731_02525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DS731_02530 PF00171 Aldehyde dehydrogenase family DS731_02540 PF09423 PhoD-like phosphatase DS731_02540 PF16655 PhoD-like phosphatase, N-terminal domain DS731_02545 PF00773 RNB domain DS731_02545 PF17876 Cold shock domain DS731_02545 PF08206 Ribonuclease B OB domain DS731_02545 PF08461 Ribonuclease R winged-helix domain DS731_02545 PF00575 S1 RNA binding domain DS731_02550 PF08032 RNA 2'-O ribose methyltransferase substrate binding DS731_02550 PF00588 SpoU rRNA Methylase family DS731_02555 PF00593 TonB dependent receptor DS731_02555 PF07715 TonB-dependent Receptor Plug Domain DS731_02565 PF00072 Response regulator receiver domain DS731_02565 PF00512 His Kinase A (phospho-acceptor) domain DS731_02565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_02565 PF09308 LuxQ, periplasmic DS731_02570 PF00238 Ribosomal protein L14p/L23e DS731_02575 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DS731_02575 PF00467 KOW motif DS731_02580 PF00673 ribosomal L5P family C-terminus DS731_02580 PF00281 Ribosomal protein L5 DS731_02585 PF00253 Ribosomal protein S14p/S29e DS731_02590 PF00410 Ribosomal protein S8 DS731_02595 PF00347 Ribosomal protein L6 DS731_02600 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DS731_02605 PF00333 Ribosomal protein S5, N-terminal domain DS731_02605 PF03719 Ribosomal protein S5, C-terminal domain DS731_02610 PF00327 Ribosomal protein L30p/L7e DS731_02615 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DS731_02620 PF00344 SecY translocase DS731_02625 PF00444 Ribosomal protein L36 DS731_02630 PF00416 Ribosomal protein S13/S18 DS731_02635 PF00411 Ribosomal protein S11 DS731_02640 PF01479 S4 domain DS731_02640 PF00163 Ribosomal protein S4/S9 N-terminal domain DS731_02645 PF01000 RNA polymerase Rpb3/RpoA insert domain DS731_02645 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DS731_02645 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DS731_02650 PF01196 Ribosomal protein L17 DS731_02695 PF00535 Glycosyl transferase family 2 DS731_02695 PF01501 Glycosyl transferase family 8 DS731_02705 PF00535 Glycosyl transferase family 2 DS731_02715 PF00483 Nucleotidyl transferase DS731_02720 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DS731_02725 PF04321 RmlD substrate binding domain DS731_02730 PF16363 GDP-mannose 4,6 dehydratase DS731_02735 PF00535 Glycosyl transferase family 2 DS731_02740 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DS731_02740 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DS731_02770 PF08645 Polynucleotide kinase 3 phosphatase DS731_02775 PF01565 FAD binding domain DS731_02775 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DS731_02780 PF08279 HTH domain DS731_02780 PF02237 Biotin protein ligase C terminal domain DS731_02780 PF03099 Biotin/lipoate A/B protein ligase family DS731_02785 PF03309 Type III pantothenate kinase DS731_02810 PF00009 Elongation factor Tu GTP binding domain DS731_02810 PF03143 Elongation factor Tu C-terminal domain DS731_02810 PF03144 Elongation factor Tu domain 2 DS731_02825 PF00990 Diguanylate cyclase, GGDEF domain DS731_02825 PF08448 PAS fold DS731_02830 PF13722 5TM C-terminal transporter carbon starvation CstA DS731_02830 PF02554 Carbon starvation protein CstA DS731_02835 PF00571 CBS domain DS731_02835 PF01595 Cyclin M transmembrane N-terminal domain DS731_02840 PF00672 HAMP domain DS731_02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_02840 PF00512 His Kinase A (phospho-acceptor) domain DS731_02845 PF00072 Response regulator receiver domain DS731_02845 PF00486 Transcriptional regulatory protein, C terminal DS731_02855 PF00005 ABC transporter DS731_02860 PF01061 ABC-2 type transporter DS731_02870 PF00563 EAL domain DS731_02875 PF00282 Pyridoxal-dependent decarboxylase conserved domain DS731_02880 PF02569 Pantoate-beta-alanine ligase DS731_02885 PF02548 Ketopantoate hydroxymethyltransferase DS731_02890 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DS731_02895 PF12627 Probable RNA and SrmB- binding site of polymerase A DS731_02895 PF01743 Poly A polymerase head domain DS731_02895 PF12626 Polymerase A arginine-rich C-terminus DS731_02900 PF00749 tRNA synthetases class I (E and Q), catalytic domain DS731_02905 PF01258 Prokaryotic dksA/traR C4-type zinc finger DS731_02910 PF17746 SfsA N-terminal OB domain DS731_02910 PF03749 Sugar fermentation stimulation protein RE domain DS731_02915 PF00883 Cytosol aminopeptidase family, catalytic domain DS731_02915 PF12404 Peptidase DS731_02925 PF01914 MarC family integral membrane protein DS731_02930 PF04222 Protein of unknown function (DUF416) DS731_02940 PF00448 SRP54-type protein, GTPase domain DS731_02940 PF02881 SRP54-type protein, helical bundle domain DS731_02945 PF00005 ABC transporter DS731_02950 PF18075 FtsX extracellular domain DS731_02955 PF08668 HDOD domain DS731_02955 PF00563 EAL domain DS731_02960 PF08668 HDOD domain DS731_02960 PF00563 EAL domain DS731_02965 PF04545 Sigma-70, region 4 DS731_02965 PF00140 Sigma-70 factor, region 1.2 DS731_02965 PF04542 Sigma-70 region 2 DS731_02975 PF02627 Carboxymuconolactone decarboxylase family DS731_02985 PF00583 Acetyltransferase (GNAT) family DS731_02985 PF09500 Putative thioesterase (yiiD_Cterm) DS731_02990 PF02580 D-Tyr-tRNA(Tyr) deacylase DS731_02995 PF00561 alpha/beta hydrolase fold DS731_03010 PF03631 Virulence factor BrkB DS731_03015 PF02219 Methylenetetrahydrofolate reductase DS731_03020 PF01340 Met Apo-repressor, MetJ DS731_03025 PF05977 Transmembrane secretion effector DS731_03030 PF00390 Malic enzyme, N-terminal domain DS731_03030 PF03949 Malic enzyme, NAD binding domain DS731_03035 PF01197 Ribosomal protein L31 DS731_03040 PF17764 3′ DNA-binding domain (3′BD) DS731_03040 PF00270 DEAD/DEAH box helicase DS731_03040 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DS731_03040 PF18074 Primosomal protein N C-terminal domain DS731_03040 PF00271 Helicase conserved C-terminal domain DS731_03055 PF00227 Proteasome subunit DS731_03060 PF00004 ATPase family associated with various cellular activities (AAA) DS731_03060 PF07724 AAA domain (Cdc48 subfamily) DS731_03065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_03065 PF03466 LysR substrate binding domain DS731_03070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DS731_03090 PF00196 Bacterial regulatory proteins, luxR family DS731_03095 PF00664 ABC transporter transmembrane region DS731_03095 PF03412 Peptidase C39 family DS731_03095 PF00005 ABC transporter DS731_03100 PF13533 Biotin-lipoyl like DS731_03115 PF07676 WD40-like Beta Propeller Repeat DS731_03130 PF00857 Isochorismatase family DS731_03135 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DS731_03135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DS731_03140 PF00795 Carbon-nitrogen hydrolase DS731_03140 PF02540 NAD synthase DS731_03145 PF07693 KAP family P-loop domain DS731_03175 PF04191 Phospholipid methyltransferase DS731_03180 PF00873 AcrB/AcrD/AcrF family DS731_03185 PF00529 HlyD membrane-fusion protein of T1SS DS731_03185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_03205 PF13411 MerR HTH family regulatory protein DS731_03210 PF02311 AraC-like ligand binding domain DS731_03210 PF12833 Helix-turn-helix domain DS731_03235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DS731_03235 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS731_03240 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_03240 PF00512 His Kinase A (phospho-acceptor) domain DS731_03240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_03245 PF00158 Sigma-54 interaction domain DS731_03245 PF00072 Response regulator receiver domain DS731_03245 PF02954 Bacterial regulatory protein, Fis family DS731_03250 PF08448 PAS fold DS731_03250 PF00072 Response regulator receiver domain DS731_03250 PF13188 PAS domain DS731_03250 PF00512 His Kinase A (phospho-acceptor) domain DS731_03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_03260 PF00072 Response regulator receiver domain DS731_03265 PF03707 Bacterial signalling protein N terminal repeat DS731_03265 PF00990 Diguanylate cyclase, GGDEF domain DS731_03265 PF00563 EAL domain DS731_03270 PF01432 Peptidase family M3 DS731_03280 PF01209 ubiE/COQ5 methyltransferase family DS731_03290 PF03109 ABC1 family DS731_03295 PF00313 'Cold-shock' DNA-binding domain DS731_03310 PF02803 Thiolase, C-terminal domain DS731_03310 PF00108 Thiolase, N-terminal domain DS731_03315 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DS731_03315 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DS731_03315 PF00378 Enoyl-CoA hydratase/isomerase DS731_03320 PF14718 Soluble lytic murein transglycosylase L domain DS731_03320 PF01464 Transglycosylase SLT domain DS731_03325 PF00557 Metallopeptidase family M24 DS731_03335 PF00348 Polyprenyl synthetase DS731_03340 PF00829 Ribosomal prokaryotic L21 protein DS731_03345 PF01016 Ribosomal L27 protein DS731_03350 PF01018 GTP1/OBG DS731_03350 PF01926 50S ribosome-binding GTPase DS731_03355 PF00186 Dihydrofolate reductase DS731_03360 PF00140 Sigma-70 factor, region 1.2 DS731_03360 PF04545 Sigma-70, region 4 DS731_03360 PF04539 Sigma-70 region 3 DS731_03360 PF04542 Sigma-70 region 2 DS731_03365 PF01476 LysM domain DS731_03365 PF01551 Peptidase family M23 DS731_03370 PF09335 SNARE associated Golgi protein DS731_03380 PF01975 Survival protein SurE DS731_03385 PF01142 tRNA pseudouridine synthase D (TruD) DS731_03390 PF02542 YgbB family DS731_03395 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DS731_03400 PF04977 Septum formation initiator DS731_03410 PF17200 Single Cache domain 2 DS731_03410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_03410 PF00672 HAMP domain DS731_03415 PF14850 DNA-binding domain of Proline dehydrogenase DS731_03415 PF01619 Proline dehydrogenase DS731_03415 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DS731_03415 PF00171 Aldehyde dehydrogenase family DS731_03425 PF01928 CYTH domain DS731_03435 PF02976 DNA mismatch repair enzyme MutH DS731_03440 PF00293 NUDIX domain DS731_03445 PF01590 GAF domain DS731_03445 PF00391 PEP-utilising enzyme, mobile domain DS731_03445 PF05524 PEP-utilising enzyme, N-terminal DS731_03445 PF02896 PEP-utilising enzyme, TIM barrel domain DS731_03450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_03450 PF08447 PAS fold DS731_03450 PF13426 PAS domain DS731_03455 PF01925 Sulfite exporter TauE/SafE DS731_03460 PF01790 Prolipoprotein diacylglyceryl transferase DS731_03465 PF00303 Thymidylate synthase DS731_03470 PF00072 Response regulator receiver domain DS731_03470 PF01339 CheB methylesterase DS731_03475 PF05230 MASE2 domain DS731_03475 PF00990 Diguanylate cyclase, GGDEF domain DS731_03480 PF00072 Response regulator receiver domain DS731_03480 PF09456 RcsC Alpha-Beta-Loop (ABL) DS731_03480 PF00512 His Kinase A (phospho-acceptor) domain DS731_03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_03485 PF07690 Major Facilitator Superfamily DS731_03500 PF00849 RNA pseudouridylate synthase DS731_03505 PF18337 RapA N-terminal Tudor like domain DS731_03505 PF18339 RapA N-terminal Tudor like domain 1 DS731_03505 PF00271 Helicase conserved C-terminal domain DS731_03505 PF00176 SNF2 family N-terminal domain DS731_03505 PF12137 RNA polymerase recycling family C-terminal DS731_03510 PF13638 PIN domain DS731_03510 PF02562 PhoH-like protein DS731_03520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DS731_03520 PF10414 Sirohaem synthase dimerisation region DS731_03525 PF03880 DbpA RNA binding domain DS731_03525 PF00271 Helicase conserved C-terminal domain DS731_03525 PF00270 DEAD/DEAH box helicase DS731_03540 PF02321 Outer membrane efflux protein DS731_03545 PF00293 NUDIX domain DS731_03550 PF06853 Protein of unknown function (DUF1249) DS731_03555 PF00149 Calcineurin-like phosphoesterase DS731_03560 PF05728 Uncharacterised protein family (UPF0227) DS731_03570 PF00986 DNA gyrase B subunit, carboxyl terminus DS731_03570 PF00204 DNA gyrase B DS731_03570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_03570 PF01751 Toprim domain DS731_03575 PF01810 LysE type translocator DS731_03580 PF13673 Acetyltransferase (GNAT) domain DS731_03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_03585 PF00512 His Kinase A (phospho-acceptor) domain DS731_03585 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_03590 PF17151 Periplasmic sensor domain DS731_03590 PF00990 Diguanylate cyclase, GGDEF domain DS731_03595 PF13419 Haloacid dehalogenase-like hydrolase DS731_03615 PF04055 Radical SAM superfamily DS731_03625 PF00152 tRNA synthetases class II (D, K and N) DS731_03630 PF07715 TonB-dependent Receptor Plug Domain DS731_03630 PF00593 TonB dependent receptor DS731_03635 PF00958 GMP synthase C terminal domain DS731_03635 PF00117 Glutamine amidotransferase class-I DS731_03635 PF03352 Methyladenine glycosylase DS731_03635 PF13673 Acetyltransferase (GNAT) domain DS731_03635 PF13302 Acetyltransferase (GNAT) domain DS731_03640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DS731_03645 PF05175 Methyltransferase small domain DS731_03655 PF01722 BolA-like protein DS731_03665 PF00135 Carboxylesterase family DS731_03670 PF03547 Membrane transport protein DS731_03675 PF01569 PAP2 superfamily DS731_03680 PF08376 Nitrate and nitrite sensing DS731_03680 PF03861 ANTAR domain DS731_03685 PF01226 Formate/nitrite transporter DS731_03690 PF03793 PASTA domain DS731_03690 PF00069 Protein kinase domain DS731_03695 PF02560 Cyanate lyase C-terminal domain DS731_03710 PF02566 OsmC-like protein DS731_03715 PF01740 STAS domain DS731_03715 PF00916 Sulfate permease family DS731_03720 PF18267 Rubredoxin NAD+ reductase C-terminal domain DS731_03720 PF13806 Rieske-like [2Fe-2S] domain DS731_03720 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS731_03720 PF04324 BFD-like [2Fe-2S] binding domain DS731_03720 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DS731_03720 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DS731_03725 PF13806 Rieske-like [2Fe-2S] domain DS731_03730 PF04324 BFD-like [2Fe-2S] binding domain DS731_03730 PF01568 Molydopterin dinucleotide binding domain DS731_03730 PF00384 Molybdopterin oxidoreductase DS731_03730 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DS731_03735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DS731_03735 PF14824 Sirohaem biosynthesis protein central DS731_03735 PF10414 Sirohaem synthase dimerisation region DS731_03740 PF00591 Glycosyl transferase family, a/b domain DS731_03740 PF02885 Glycosyl transferase family, helical bundle domain DS731_03750 PF00005 ABC transporter DS731_03755 PF00528 Binding-protein-dependent transport system inner membrane component DS731_03760 PF00005 ABC transporter DS731_03770 PF12804 MobA-like NTP transferase domain DS731_03775 PF00990 Diguanylate cyclase, GGDEF domain DS731_03785 PF01323 DSBA-like thioredoxin domain DS731_03790 PF01636 Phosphotransferase enzyme family DS731_03795 PF13746 4Fe-4S dicluster domain DS731_03795 PF12801 4Fe-4S binding domain DS731_03795 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DS731_03815 PF04231 Endonuclease I DS731_03820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DS731_03820 PF12806 Acetyl-CoA dehydrogenase C-terminal like DS731_03820 PF02770 Acyl-CoA dehydrogenase, middle domain DS731_03820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DS731_03825 PF01757 Acyltransferase family DS731_03840 PF02386 Cation transport protein DS731_03845 PF02080 TrkA-C domain DS731_03845 PF02254 TrkA-N domain DS731_03850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS731_03850 PF13378 Enolase C-terminal domain-like DS731_03855 PF00596 Class II Aldolase and Adducin N-terminal domain DS731_03865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_03870 PF00873 AcrB/AcrD/AcrF family DS731_03875 PF05724 Thiopurine S-methyltransferase (TPMT) DS731_03880 PF00474 Sodium:solute symporter family DS731_03890 PF07690 Major Facilitator Superfamily DS731_03895 PF00005 ABC transporter DS731_03895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DS731_03900 PF12911 N-terminal TM domain of oligopeptide transport permease C DS731_03900 PF00528 Binding-protein-dependent transport system inner membrane component DS731_03905 PF00528 Binding-protein-dependent transport system inner membrane component DS731_03910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS731_03915 PF00248 Aldo/keto reductase family DS731_03925 PF13378 Enolase C-terminal domain-like DS731_03925 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS731_03935 PF03466 LysR substrate binding domain DS731_03935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_03940 PF04545 Sigma-70, region 4 DS731_03940 PF04546 Sigma-70, non-essential region DS731_03940 PF03979 Sigma-70 factor, region 1.1 DS731_03940 PF00140 Sigma-70 factor, region 1.2 DS731_03940 PF04542 Sigma-70 region 2 DS731_03940 PF04539 Sigma-70 region 3 DS731_03945 PF08275 DNA primase catalytic core, N-terminal domain DS731_03945 PF08278 DNA primase DnaG DnaB-binding DS731_03945 PF10410 DnaB-helicase binding domain of primase DS731_03945 PF01807 CHC2 zinc finger DS731_03950 PF09424 Yqey-like protein DS731_03955 PF01165 Ribosomal protein S21 DS731_03960 PF00814 Glycoprotease family DS731_03975 PF02660 Glycerol-3-phosphate acyltransferase DS731_03990 PF02673 Bacitracin resistance protein BacA DS731_03995 PF01230 HIT domain DS731_04015 PF00155 Aminotransferase class I and II DS731_04020 PF03186 CobD/Cbib protein DS731_04025 PF01497 Periplasmic binding protein DS731_04030 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DS731_04030 PF12557 Cob(I)alamin adenosyltransferase N terminal DS731_04035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DS731_04035 PF07685 CobB/CobQ-like glutamine amidotransferase domain DS731_04045 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DS731_04050 PF02654 Cobalamin-5-phosphate synthase DS731_04055 PF02277 Phosphoribosyltransferase DS731_04060 PF01032 FecCD transport family DS731_04065 PF00005 ABC transporter DS731_04075 PF03594 Benzoate membrane transport protein DS731_04080 PF04381 Putative exonuclease, RdgC DS731_04085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_04085 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_04085 PF00512 His Kinase A (phospho-acceptor) domain DS731_04090 PF00486 Transcriptional regulatory protein, C terminal DS731_04090 PF00072 Response regulator receiver domain DS731_04095 PF11808 Phosphate regulon sensor protein PhoR DS731_04095 PF00512 His Kinase A (phospho-acceptor) domain DS731_04095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_04095 PF00989 PAS fold DS731_04100 PF12849 PBP superfamily domain DS731_04120 PF01618 MotA/TolQ/ExbB proton channel family DS731_04125 PF01618 MotA/TolQ/ExbB proton channel family DS731_04130 PF02472 Biopolymer transport protein ExbD/TolR DS731_04135 PF03544 Gram-negative bacterial TonB protein C-terminal DS731_04155 PF00072 Response regulator receiver domain DS731_04160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DS731_04160 PF00072 Response regulator receiver domain DS731_04160 PF01627 Hpt domain DS731_04160 PF00512 His Kinase A (phospho-acceptor) domain DS731_04160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_04160 PF00672 HAMP domain DS731_04175 PF07995 Glucose / Sorbosone dehydrogenase DS731_04180 PF11791 Aconitate B N-terminal domain DS731_04180 PF06434 Aconitate hydratase 2 N-terminus DS731_04180 PF00330 Aconitase family (aconitate hydratase) DS731_04190 PF00696 Amino acid kinase family DS731_04190 PF01842 ACT domain DS731_04195 PF12833 Helix-turn-helix domain DS731_04205 PF00990 Diguanylate cyclase, GGDEF domain DS731_04205 PF00563 EAL domain DS731_04205 PF01590 GAF domain DS731_04205 PF00360 Phytochrome region DS731_04210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_04210 PF17200 Single Cache domain 2 DS731_04210 PF00672 HAMP domain DS731_04215 PF00149 Calcineurin-like phosphoesterase DS731_04220 PF04379 ApaG domain DS731_04225 PF00398 Ribosomal RNA adenine dimethylase DS731_04230 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DS731_04235 PF09312 SurA N-terminal domain DS731_04235 PF00639 PPIC-type PPIASE domain DS731_04240 PF04453 LPS transport system D DS731_04240 PF03968 OstA-like protein DS731_04245 PF05099 Tellurite resistance protein TerB DS731_04245 PF00226 DnaJ domain DS731_04250 PF02899 Phage integrase, N-terminal SAM-like domain DS731_04250 PF00589 Phage integrase family DS731_04265 PF10411 Disulfide bond isomerase protein N-terminus DS731_04265 PF13098 Thioredoxin-like domain DS731_04270 PF01368 DHH family DS731_04270 PF02272 DHHA1 domain DS731_04270 PF17768 RecJ OB domain DS731_04280 PF11967 Recombination protein O N terminal DS731_04280 PF02565 Recombination protein O C terminal DS731_04285 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DS731_04290 PF01648 4'-phosphopantetheinyl transferase superfamily DS731_04295 PF05958 tRNA (Uracil-5-)-methyltransferase DS731_04300 PF13291 ACT domain DS731_04300 PF04607 Region found in RelA / SpoT proteins DS731_04300 PF02824 TGS domain DS731_04305 PF03819 MazG nucleotide pyrophosphohydrolase domain DS731_04315 PF00572 Ribosomal protein L13 DS731_04320 PF00380 Ribosomal protein S9/S16 DS731_04325 PF01546 Peptidase family M20/M25/M40 DS731_04330 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DS731_04330 PF00355 Rieske [2Fe-2S] domain DS731_04335 PF00033 Cytochrome b/b6/petB DS731_04335 PF00032 Cytochrome b(C-terminal)/b6/petD DS731_04340 PF02167 Cytochrome C1 family DS731_04345 PF00043 Glutathione S-transferase, C-terminal domain DS731_04345 PF02798 Glutathione S-transferase, N-terminal domain DS731_04350 PF04386 Stringent starvation protein B DS731_04365 PF00072 Response regulator receiver domain DS731_04365 PF00486 Transcriptional regulatory protein, C terminal DS731_04370 PF00571 CBS domain DS731_04370 PF01769 Divalent cation transporter DS731_04370 PF03448 MgtE intracellular N domain DS731_04390 PF05360 yiaA/B two helix domain DS731_04400 PF00381 PTS HPr component phosphorylation site DS731_04405 PF03668 P-loop ATPase protein family DS731_04410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DS731_04415 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DS731_04420 PF04552 Sigma-54, DNA binding domain DS731_04420 PF04963 Sigma-54 factor, core binding domain DS731_04420 PF00309 Sigma-54 factor, Activator interacting domain (AID) DS731_04425 PF00005 ABC transporter DS731_04425 PF12399 Branched-chain amino acid ATP-binding cassette transporter DS731_04445 PF00571 CBS domain DS731_04445 PF01380 SIS domain DS731_04450 PF01699 Sodium/calcium exchanger protein DS731_04460 PF00005 ABC transporter DS731_04465 PF02405 Permease MlaE DS731_04470 PF02470 MlaD protein DS731_04475 PF05494 MlaC protein DS731_04485 PF01722 BolA-like protein DS731_04490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DS731_04495 PF00512 His Kinase A (phospho-acceptor) domain DS731_04495 PF00672 HAMP domain DS731_04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_04500 PF00486 Transcriptional regulatory protein, C terminal DS731_04500 PF00072 Response regulator receiver domain DS731_04515 PF13180 PDZ domain DS731_04520 PF13180 PDZ domain DS731_04520 PF00595 PDZ domain DS731_04530 PF03969 AFG1-like ATPase DS731_04535 PF01709 Transcriptional regulator DS731_04590 PF02397 Bacterial sugar transferase DS731_04595 PF00005 ABC transporter DS731_04595 PF00664 ABC transporter transmembrane region DS731_04635 PF09308 LuxQ, periplasmic DS731_04635 PF00072 Response regulator receiver domain DS731_04635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_04635 PF00512 His Kinase A (phospho-acceptor) domain DS731_04650 PF01177 Asp/Glu/Hydantoin racemase DS731_04660 PF02772 S-adenosylmethionine synthetase, central domain DS731_04660 PF00438 S-adenosylmethionine synthetase, N-terminal domain DS731_04660 PF02773 S-adenosylmethionine synthetase, C-terminal domain DS731_04665 PF02780 Transketolase, C-terminal domain DS731_04665 PF00456 Transketolase, thiamine diphosphate binding domain DS731_04665 PF02779 Transketolase, pyrimidine binding domain DS731_04670 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DS731_04670 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DS731_04675 PF00162 Phosphoglycerate kinase DS731_04680 PF00274 Fructose-bisphosphate aldolase class-I DS731_04685 PF17151 Periplasmic sensor domain DS731_04685 PF00990 Diguanylate cyclase, GGDEF domain DS731_04690 PF02541 Ppx/GppA phosphatase family DS731_04695 PF02503 Polyphosphate kinase middle domain DS731_04695 PF13089 Polyphosphate kinase N-terminal domain DS731_04695 PF17941 Polyphosphate kinase C-terminal domain 1 DS731_04695 PF13090 Polyphosphate kinase C-terminal domain 2 DS731_04705 PF00528 Binding-protein-dependent transport system inner membrane component DS731_04710 PF00528 Binding-protein-dependent transport system inner membrane component DS731_04715 PF00005 ABC transporter DS731_04720 PF01895 PhoU domain DS731_04725 PF01384 Phosphate transporter family DS731_04730 PF00582 Universal stress protein family DS731_04735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_04735 PF03466 LysR substrate binding domain DS731_04755 PF02397 Bacterial sugar transferase DS731_04770 PF13614 AAA domain DS731_04815 PF00535 Glycosyl transferase family 2 DS731_04830 PF13230 Glutamine amidotransferases class-II DS731_04850 PF03006 Haemolysin-III related DS731_04860 PF07715 TonB-dependent Receptor Plug Domain DS731_04860 PF00593 TonB dependent receptor DS731_04865 PF01047 MarR family DS731_04870 PF01425 Amidase DS731_04875 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DS731_04890 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DS731_04890 PF00355 Rieske [2Fe-2S] domain DS731_04905 PF00111 2Fe-2S iron-sulfur cluster binding domain DS731_04905 PF00175 Oxidoreductase NAD-binding domain DS731_04910 PF01361 Tautomerase enzyme DS731_04915 PF01613 Flavin reductase like domain DS731_04920 PF01546 Peptidase family M20/M25/M40 DS731_04930 PF00732 GMC oxidoreductase DS731_04930 PF05199 GMC oxidoreductase DS731_04940 PF07690 Major Facilitator Superfamily DS731_04955 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DS731_04955 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DS731_04960 PF01272 Transcription elongation factor, GreA/GreB, C-term DS731_04960 PF14760 Rnk N-terminus DS731_04965 PF00970 Oxidoreductase FAD-binding domain DS731_04965 PF00175 Oxidoreductase NAD-binding domain DS731_04965 PF00042 Globin DS731_04970 PF00158 Sigma-54 interaction domain DS731_04970 PF01590 GAF domain DS731_04995 PF08240 Alcohol dehydrogenase GroES-like domain DS731_04995 PF00107 Zinc-binding dehydrogenase DS731_05000 PF16197 Ketoacyl-synthetase C-terminal extension DS731_05000 PF00698 Acyl transferase domain DS731_05000 PF08240 Alcohol dehydrogenase GroES-like domain DS731_05000 PF08659 KR domain DS731_05000 PF00550 Phosphopantetheine attachment site DS731_05000 PF14765 Polyketide synthase dehydratase DS731_05000 PF02801 Beta-ketoacyl synthase, C-terminal domain DS731_05000 PF00109 Beta-ketoacyl synthase, N-terminal domain DS731_05005 PF00106 short chain dehydrogenase DS731_05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_05010 PF03466 LysR substrate binding domain DS731_05015 PF01205 Uncharacterized protein family UPF0029 DS731_05015 PF09186 Domain of unknown function (DUF1949) DS731_05020 PF00557 Metallopeptidase family M24 DS731_05020 PF01321 Creatinase/Prolidase N-terminal domain DS731_05030 PF13188 PAS domain DS731_05030 PF03707 Bacterial signalling protein N terminal repeat DS731_05030 PF00990 Diguanylate cyclase, GGDEF domain DS731_05030 PF00563 EAL domain DS731_05035 PF03705 CheR methyltransferase, all-alpha domain DS731_05035 PF01339 CheB methylesterase DS731_05035 PF01739 CheR methyltransferase, SAM binding domain DS731_05035 PF08448 PAS fold DS731_05050 PF00691 OmpA family DS731_05055 PF00664 ABC transporter transmembrane region DS731_05055 PF00005 ABC transporter DS731_05055 PF03412 Peptidase C39 family DS731_05060 PF00529 HlyD membrane-fusion protein of T1SS DS731_05065 PF00072 Response regulator receiver domain DS731_05065 PF00196 Bacterial regulatory proteins, luxR family DS731_05070 PF00512 His Kinase A (phospho-acceptor) domain DS731_05070 PF00072 Response regulator receiver domain DS731_05070 PF08448 PAS fold DS731_05070 PF13426 PAS domain DS731_05070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_05075 PF11849 Domain of unknown function (DUF3369) DS731_05080 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_05080 PF00512 His Kinase A (phospho-acceptor) domain DS731_05080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_05085 PF00990 Diguanylate cyclase, GGDEF domain DS731_05085 PF00989 PAS fold DS731_05085 PF00563 EAL domain DS731_05085 PF01590 GAF domain DS731_05095 PF00149 Calcineurin-like phosphoesterase DS731_05095 PF12320 Type 5 capsule protein repressor C-terminal domain DS731_05100 PF13476 AAA domain DS731_05105 PF00480 ROK family DS731_05125 PF04820 Tryptophan halogenase DS731_05140 PF03773 Predicted permease DS731_05145 PF13411 MerR HTH family regulatory protein DS731_05155 PF00072 Response regulator receiver domain DS731_05155 PF00486 Transcriptional regulatory protein, C terminal DS731_05160 PF00512 His Kinase A (phospho-acceptor) domain DS731_05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_05160 PF00672 HAMP domain DS731_05170 PF00005 ABC transporter DS731_05170 PF12848 ABC transporter DS731_05175 PF00722 Glycosyl hydrolases family 16 DS731_05185 PF01863 Protein of unknown function DUF45 DS731_05195 PF01219 Prokaryotic diacylglycerol kinase DS731_05205 PF00486 Transcriptional regulatory protein, C terminal DS731_05205 PF00072 Response regulator receiver domain DS731_05210 PF00672 HAMP domain DS731_05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_05210 PF00512 His Kinase A (phospho-acceptor) domain DS731_05215 PF00933 Glycosyl hydrolase family 3 N terminal domain DS731_05215 PF14310 Fibronectin type III-like domain DS731_05215 PF01915 Glycosyl hydrolase family 3 C-terminal domain DS731_05220 PF00232 Glycosyl hydrolase family 1 DS731_05225 PF00356 Bacterial regulatory proteins, lacI family DS731_05230 PF00083 Sugar (and other) transporter DS731_05250 PF07715 TonB-dependent Receptor Plug Domain DS731_05250 PF00593 TonB dependent receptor DS731_05255 PF07519 Tannase and feruloyl esterase DS731_05260 PF00682 HMGL-like DS731_05265 PF03600 Citrate transporter DS731_05270 PF00144 Beta-lactamase DS731_05275 PF02515 CoA-transferase family III DS731_05285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_05285 PF03466 LysR substrate binding domain DS731_05295 PF00563 EAL domain DS731_05295 PF00990 Diguanylate cyclase, GGDEF domain DS731_05295 PF03707 Bacterial signalling protein N terminal repeat DS731_05305 PF06628 Catalase-related immune-responsive DS731_05305 PF00199 Catalase DS731_05315 PF00111 2Fe-2S iron-sulfur cluster binding domain DS731_05315 PF01799 [2Fe-2S] binding domain DS731_05325 PF13640 2OG-Fe(II) oxygenase superfamily DS731_05325 PF18331 PKHD-type hydroxylase C-terminal domain DS731_05330 PF00593 TonB dependent receptor DS731_05330 PF07715 TonB-dependent Receptor Plug Domain DS731_05405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_05410 PF00873 AcrB/AcrD/AcrF family DS731_05430 PF13411 MerR HTH family regulatory protein DS731_05435 PF00403 Heavy-metal-associated domain DS731_05470 PF13520 Amino acid permease DS731_05480 PF00394 Multicopper oxidase DS731_05480 PF07731 Multicopper oxidase DS731_05480 PF07732 Multicopper oxidase DS731_05505 PF03466 LysR substrate binding domain DS731_05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_05510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS731_05510 PF13378 Enolase C-terminal domain-like DS731_05515 PF00775 Dioxygenase DS731_05515 PF04444 Catechol dioxygenase N terminus DS731_05520 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DS731_05520 PF00355 Rieske [2Fe-2S] domain DS731_05525 PF00866 Ring hydroxylating beta subunit DS731_05530 PF00111 2Fe-2S iron-sulfur cluster binding domain DS731_05530 PF00175 Oxidoreductase NAD-binding domain DS731_05530 PF00970 Oxidoreductase FAD-binding domain DS731_05535 PF00106 short chain dehydrogenase DS731_05540 PF03594 Benzoate membrane transport protein DS731_05545 PF07519 Tannase and feruloyl esterase DS731_05555 PF00005 ABC transporter DS731_05560 PF00005 ABC transporter DS731_05560 PF12399 Branched-chain amino acid ATP-binding cassette transporter DS731_05565 PF02653 Branched-chain amino acid transport system / permease component DS731_05570 PF02653 Branched-chain amino acid transport system / permease component DS731_05585 PF12146 Serine aminopeptidase, S33 DS731_05590 PF00108 Thiolase, N-terminal domain DS731_05590 PF02803 Thiolase, C-terminal domain DS731_05595 PF01144 Coenzyme A transferase DS731_05600 PF01144 Coenzyme A transferase DS731_05605 PF01614 Bacterial transcriptional regulator DS731_05605 PF09339 IclR helix-turn-helix domain DS731_05610 PF13378 Enolase C-terminal domain-like DS731_05610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS731_05615 PF02426 Muconolactone delta-isomerase DS731_05620 PF00171 Aldehyde dehydrogenase family DS731_05625 PF05199 GMC oxidoreductase DS731_05625 PF00732 GMC oxidoreductase DS731_05635 PF02954 Bacterial regulatory protein, Fis family DS731_05635 PF01590 GAF domain DS731_05635 PF00158 Sigma-54 interaction domain DS731_05645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_05645 PF03466 LysR substrate binding domain DS731_05650 PF01494 FAD binding domain DS731_05660 PF00561 alpha/beta hydrolase fold DS731_05670 PF01557 Fumarylacetoacetate (FAA) hydrolase family DS731_05675 PF07883 Cupin domain DS731_05680 PF01557 Fumarylacetoacetate (FAA) hydrolase family DS731_05685 PF07690 Major Facilitator Superfamily DS731_05695 PF03737 Aldolase/RraA DS731_05700 PF00593 TonB dependent receptor DS731_05700 PF07715 TonB-dependent Receptor Plug Domain DS731_05725 PF05199 GMC oxidoreductase DS731_05725 PF00732 GMC oxidoreductase DS731_05755 PF03788 LrgA family DS731_05760 PF04172 LrgB-like family DS731_05765 PF00072 Response regulator receiver domain DS731_05790 PF04055 Radical SAM superfamily DS731_05790 PF06969 HemN C-terminal domain DS731_05795 PF01725 Ham1 family DS731_05800 PF00270 DEAD/DEAH box helicase DS731_05800 PF00271 Helicase conserved C-terminal domain DS731_05805 PF00270 DEAD/DEAH box helicase DS731_05805 PF00570 HRDC domain DS731_05805 PF09382 RQC domain DS731_05805 PF00271 Helicase conserved C-terminal domain DS731_05805 PF16124 RecQ zinc-binding DS731_05815 PF01743 Poly A polymerase head domain DS731_05815 PF12627 Probable RNA and SrmB- binding site of polymerase A DS731_05820 PF01471 Putative peptidoglycan binding domain DS731_05820 PF13401 AAA domain DS731_05830 PF01966 HD domain DS731_05830 PF11871 Domain of unknown function (DUF3391) DS731_05835 PF00694 Aconitase C-terminal domain DS731_05840 PF00330 Aconitase family (aconitate hydratase) DS731_05845 PF00180 Isocitrate/isopropylmalate dehydrogenase DS731_05850 PF00682 HMGL-like DS731_05850 PF08502 LeuA allosteric (dimerisation) domain DS731_05860 PF00113 Enolase, C-terminal TIM barrel domain DS731_05860 PF03952 Enolase, N-terminal domain DS731_05865 PF00117 Glutamine amidotransferase class-I DS731_05865 PF06418 CTP synthase N-terminus DS731_05870 PF01624 MutS domain I DS731_05870 PF00488 MutS domain V DS731_05870 PF05190 MutS family domain IV DS731_05870 PF05192 MutS domain III DS731_05870 PF05188 MutS domain II DS731_05875 PF02464 Competence-damaged protein DS731_05880 PF00154 recA bacterial DNA recombination protein DS731_05885 PF00672 HAMP domain DS731_05885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_05885 PF02743 Cache domain DS731_05900 PF00005 ABC transporter DS731_05905 PF03379 CcmB protein DS731_05910 PF01578 Cytochrome C assembly protein DS731_05915 PF04995 Heme exporter protein D (CcmD) DS731_05920 PF03100 CcmE DS731_05925 PF01578 Cytochrome C assembly protein DS731_05925 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DS731_05930 PF08534 Redoxin DS731_05935 PF03918 Cytochrome C biogenesis protein DS731_05945 PF04333 MlaA lipoprotein DS731_05950 PF01370 NAD dependent epimerase/dehydratase family DS731_05960 PF00854 POT family DS731_05970 PF00005 ABC transporter DS731_05975 PF01061 ABC-2 type transporter DS731_05980 PF10531 SLBB domain DS731_05980 PF02563 Polysaccharide biosynthesis/export protein DS731_05990 PF00953 Glycosyl transferase family 4 DS731_05995 PF00535 Glycosyl transferase family 2 DS731_06005 PF00483 Nucleotidyl transferase DS731_06010 PF10531 SLBB domain DS731_06015 PF00180 Isocitrate/isopropylmalate dehydrogenase DS731_06015 PF18324 Hypothetical protein TT1725 DS731_06030 PF11892 Domain of unknown function (DUF3412) DS731_06030 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases DS731_06030 PF03641 Possible lysine decarboxylase DS731_06035 PF00072 Response regulator receiver domain DS731_06035 PF00990 Diguanylate cyclase, GGDEF domain DS731_06040 PF14489 QueF-like protein DS731_06040 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term DS731_06045 PF07348 Syd protein (SUKH-2) DS731_06085 PF00258 Flavodoxin DS731_06090 PF14602 Hexapeptide repeat of succinyl-transferase DS731_06090 PF00132 Bacterial transferase hexapeptide (six repeats) DS731_06090 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DS731_06100 PF00557 Metallopeptidase family M24 DS731_06110 PF00318 Ribosomal protein S2 DS731_06115 PF00889 Elongation factor TS DS731_06120 PF00696 Amino acid kinase family DS731_06125 PF01765 Ribosome recycling factor DS731_06130 PF01255 Putative undecaprenyl diphosphate synthase DS731_06140 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DS731_06140 PF13288 DXP reductoisomerase C-terminal domain DS731_06140 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DS731_06145 PF02163 Peptidase family M50 DS731_06145 PF17820 PDZ domain DS731_06150 PF07244 Surface antigen variable number repeat DS731_06150 PF01103 Surface antigen DS731_06155 PF03938 Outer membrane protein (OmpH-like) DS731_06160 PF07977 FabA-like domain DS731_06165 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DS731_06165 PF00132 Bacterial transferase hexapeptide (six repeats) DS731_06170 PF02684 Lipid-A-disaccharide synthetase DS731_06175 PF01351 Ribonuclease HII DS731_06180 PF02811 PHP domain DS731_06180 PF14579 Helix-hairpin-helix motif DS731_06180 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DS731_06180 PF01336 OB-fold nucleic acid binding domain DS731_06180 PF07733 Bacterial DNA polymerase III alpha NTPase domain DS731_06185 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DS731_06190 PF01171 PP-loop family DS731_06190 PF11734 TilS substrate C-terminal domain DS731_06190 PF09179 TilS substrate binding domain DS731_06195 PF00990 Diguanylate cyclase, GGDEF domain DS731_06195 PF00563 EAL domain DS731_06195 PF03707 Bacterial signalling protein N terminal repeat DS731_06200 PF02080 TrkA-C domain DS731_06200 PF00999 Sodium/hydrogen exchanger family DS731_06200 PF02254 TrkA-N domain DS731_06210 PF14437 MafB19-like deaminase DS731_06215 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_06215 PF01464 Transglycosylase SLT domain DS731_06220 PF02769 AIR synthase related protein, C-terminal domain DS731_06220 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DS731_06220 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DS731_06260 PF01584 CheW-like domain DS731_06260 PF00072 Response regulator receiver domain DS731_06265 PF03705 CheR methyltransferase, all-alpha domain DS731_06265 PF01739 CheR methyltransferase, SAM binding domain DS731_06270 PF00460 Flagella basal body rod protein DS731_06275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DS731_06275 PF00460 Flagella basal body rod protein DS731_06280 PF03963 Flagellar hook capping protein - N-terminal region DS731_06280 PF13860 FlgD Ig-like domain DS731_06280 PF13861 FlgD Tudor-like domain DS731_06285 PF00460 Flagella basal body rod protein DS731_06285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DS731_06285 PF07559 Flagellar basal body protein FlaE DS731_06290 PF00460 Flagella basal body rod protein DS731_06290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DS731_06295 PF00460 Flagella basal body rod protein DS731_06295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DS731_06300 PF02107 Flagellar L-ring protein DS731_06305 PF02119 Flagellar P-ring protein DS731_06310 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DS731_06310 PF10135 Rod binding protein DS731_06315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DS731_06315 PF00460 Flagella basal body rod protein DS731_06330 PF00669 Bacterial flagellin N-terminal helical region DS731_06330 PF07196 Flagellin hook IN motif DS731_06330 PF00700 Bacterial flagellin C-terminal helical region DS731_06335 PF00669 Bacterial flagellin N-terminal helical region DS731_06335 PF07196 Flagellin hook IN motif DS731_06335 PF00700 Bacterial flagellin C-terminal helical region DS731_06340 PF00669 Bacterial flagellin N-terminal helical region DS731_06340 PF00700 Bacterial flagellin C-terminal helical region DS731_06340 PF07196 Flagellin hook IN motif DS731_06345 PF03646 FlaG protein DS731_06350 PF07196 Flagellin hook IN motif DS731_06350 PF02465 Flagellar hook-associated protein 2 N-terminus DS731_06350 PF07195 Flagellar hook-associated protein 2 C-terminus DS731_06355 PF02561 Flagellar protein FliS DS731_06365 PF02719 Polysaccharide biosynthesis protein DS731_06370 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DS731_06375 PF02348 Cytidylyltransferase DS731_06385 PF08666 SAF domain DS731_06385 PF03102 NeuB family DS731_06425 PF00535 Glycosyl transferase family 2 DS731_06430 PF00535 Glycosyl transferase family 2 DS731_06455 PF01370 NAD dependent epimerase/dehydratase family DS731_06460 PF13580 SIS domain DS731_06465 PF16363 GDP-mannose 4,6 dehydratase DS731_06470 PF13649 Methyltransferase domain DS731_06475 PF00676 Dehydrogenase E1 component DS731_06480 PF02779 Transketolase, pyrimidine binding domain DS731_06480 PF02780 Transketolase, C-terminal domain DS731_06490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DS731_06490 PF00205 Thiamine pyrophosphate enzyme, central domain DS731_06490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DS731_06500 PF00483 Nucleotidyl transferase DS731_06505 PF01467 Cytidylyltransferase-like DS731_06505 PF00294 pfkB family carbohydrate kinase DS731_06510 PF00107 Zinc-binding dehydrogenase DS731_06510 PF08240 Alcohol dehydrogenase GroES-like domain DS731_06515 PF00700 Bacterial flagellin C-terminal helical region DS731_06515 PF00669 Bacterial flagellin N-terminal helical region DS731_06520 PF00158 Sigma-54 interaction domain DS731_06520 PF02954 Bacterial regulatory protein, Fis family DS731_06520 PF00072 Response regulator receiver domain DS731_06525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_06525 PF00512 His Kinase A (phospho-acceptor) domain DS731_06525 PF00989 PAS fold DS731_06530 PF02954 Bacterial regulatory protein, Fis family DS731_06530 PF00072 Response regulator receiver domain DS731_06530 PF00158 Sigma-54 interaction domain DS731_06535 PF02049 Flagellar hook-basal body complex protein FliE DS731_06540 PF08345 Flagellar M-ring protein C-terminal DS731_06540 PF01514 Secretory protein of YscJ/FliF family DS731_06545 PF01706 FliG C-terminal domain DS731_06545 PF14842 FliG N-terminal domain DS731_06545 PF14841 FliG middle domain DS731_06555 PF18269 T3SS EscN ATPase C-terminal domain DS731_06555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DS731_06575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DS731_06575 PF02154 Flagellar motor switch protein FliM DS731_06580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DS731_06585 PF04347 Flagellar biosynthesis protein, FliO DS731_06590 PF00813 FliP family DS731_06595 PF01313 Bacterial export proteins, family 3 DS731_06600 PF01311 Bacterial export proteins, family 1 DS731_06605 PF01312 FlhB HrpN YscU SpaS Family DS731_06610 PF00990 Diguanylate cyclase, GGDEF domain DS731_06610 PF17151 Periplasmic sensor domain DS731_06615 PF00771 FHIPEP family DS731_06620 PF00448 SRP54-type protein, GTPase domain DS731_06625 PF10609 NUBPL iron-transfer P-loop NTPase DS731_06630 PF04545 Sigma-70, region 4 DS731_06630 PF04539 Sigma-70 region 3 DS731_06630 PF04542 Sigma-70 region 2 DS731_06635 PF00072 Response regulator receiver domain DS731_06640 PF04344 Chemotaxis phosphatase, CheZ DS731_06645 PF07194 P2 response regulator binding domain DS731_06645 PF01627 Hpt domain DS731_06645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_06645 PF02895 Signal transducing histidine kinase, homodimeric domain DS731_06645 PF01584 CheW-like domain DS731_06650 PF00072 Response regulator receiver domain DS731_06650 PF01339 CheB methylesterase DS731_06655 PF13614 AAA domain DS731_06665 PF01584 CheW-like domain DS731_06675 PF13404 AsnC-type helix-turn-helix domain DS731_06675 PF01037 Lrp/AsnC ligand binding domain DS731_06680 PF08240 Alcohol dehydrogenase GroES-like domain DS731_06680 PF00107 Zinc-binding dehydrogenase DS731_06685 PF04204 Homoserine O-succinyltransferase DS731_06690 PF02574 Homocysteine S-methyltransferase DS731_06690 PF02310 B12 binding domain DS731_06690 PF00809 Pterin binding enzyme DS731_06690 PF02607 B12 binding domain DS731_06690 PF02965 Vitamin B12 dependent methionine synthase, activation domain DS731_06695 PF02607 B12 binding domain DS731_06695 PF02965 Vitamin B12 dependent methionine synthase, activation domain DS731_06695 PF02310 B12 binding domain DS731_06695 PF00809 Pterin binding enzyme DS731_06695 PF02574 Homocysteine S-methyltransferase DS731_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_06715 PF03466 LysR substrate binding domain DS731_06720 PF03466 LysR substrate binding domain DS731_06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_06725 PF00484 Carbonic anhydrase DS731_06735 PF00484 Carbonic anhydrase DS731_06740 PF01740 STAS domain DS731_06740 PF00916 Sulfate permease family DS731_06745 PF07715 TonB-dependent Receptor Plug Domain DS731_06745 PF00593 TonB dependent receptor DS731_06755 PF05649 Peptidase family M13 DS731_06755 PF01431 Peptidase family M13 DS731_06765 PF02631 RecX family DS731_06770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DS731_06770 PF02272 DHHA1 domain DS731_06770 PF01411 tRNA synthetases class II (A) DS731_06775 PF02599 Global regulator protein family DS731_06795 PF00072 Response regulator receiver domain DS731_06795 PF00486 Transcriptional regulatory protein, C terminal DS731_06800 PF08521 Two-component sensor kinase N-terminal DS731_06800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_06800 PF00512 His Kinase A (phospho-acceptor) domain DS731_06825 PF00501 AMP-binding enzyme DS731_06825 PF13193 AMP-binding enzyme C-terminal domain DS731_06825 PF00668 Condensation domain DS731_06825 PF00550 Phosphopantetheine attachment site DS731_06825 PF00975 Thioesterase domain DS731_06845 PF04277 Oxaloacetate decarboxylase, gamma chain DS731_06850 PF00364 Biotin-requiring enzyme DS731_06850 PF00682 HMGL-like DS731_06850 PF02436 Conserved carboxylase domain DS731_06855 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DS731_06860 PF00005 ABC transporter DS731_06865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DS731_06865 PF00005 ABC transporter DS731_06870 PF12911 N-terminal TM domain of oligopeptide transport permease C DS731_06870 PF00528 Binding-protein-dependent transport system inner membrane component DS731_06875 PF00528 Binding-protein-dependent transport system inner membrane component DS731_06880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DS731_06885 PF02954 Bacterial regulatory protein, Fis family DS731_06885 PF00158 Sigma-54 interaction domain DS731_06890 PF04012 PspA/IM30 family DS731_06895 PF06667 Phage shock protein B DS731_06905 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DS731_06910 PF00158 Sigma-54 interaction domain DS731_06910 PF18024 Helix-turn-helix domain DS731_06915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DS731_06920 PF04209 homogentisate 1,2-dioxygenase DS731_06930 PF02798 Glutathione S-transferase, N-terminal domain DS731_06930 PF14497 Glutathione S-transferase, C-terminal domain DS731_06935 PF01037 Lrp/AsnC ligand binding domain DS731_06940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DS731_06940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DS731_06955 PF03301 Tryptophan 2,3-dioxygenase DS731_06980 PF01618 MotA/TolQ/ExbB proton channel family DS731_06985 PF01618 MotA/TolQ/ExbB proton channel family DS731_06990 PF02472 Biopolymer transport protein ExbD/TolR DS731_06995 PF03544 Gram-negative bacterial TonB protein C-terminal DS731_07005 PF17176 tRNA-binding domain DS731_07005 PF08351 Domain of unknown function (DUF1726) DS731_07005 PF05127 Helicase DS731_07005 PF13718 GNAT acetyltransferase 2 DS731_07055 PF00583 Acetyltransferase (GNAT) family DS731_07060 PF16658 Class II release factor RF3, C-terminal domain DS731_07060 PF03144 Elongation factor Tu domain 2 DS731_07060 PF00009 Elongation factor Tu GTP binding domain DS731_07065 PF05746 DALR anticodon binding domain DS731_07065 PF03485 Arginyl tRNA synthetase N terminal domain DS731_07065 PF00750 tRNA synthetases class I (R) DS731_07070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_07070 PF03466 LysR substrate binding domain DS731_07085 PF01336 OB-fold nucleic acid binding domain DS731_07085 PF00152 tRNA synthetases class II (D, K and N) DS731_07090 PF01226 Formate/nitrite transporter DS731_07095 PF02558 Ketopantoate reductase PanE/ApbA DS731_07095 PF08546 Ketopantoate reductase PanE/ApbA C terminal DS731_07100 PF00849 RNA pseudouridylate synthase DS731_07110 PF05193 Peptidase M16 inactive domain DS731_07110 PF00675 Insulinase (Peptidase family M16) DS731_07115 PF04262 Glutamate-cysteine ligase DS731_07130 PF01713 Smr domain DS731_07135 PF05175 Methyltransferase small domain DS731_07140 PF01264 Chorismate synthase DS731_07150 PF00144 Beta-lactamase DS731_07155 PF04293 SpoVR like protein DS731_07160 PF04285 Protein of unknown function (DUF444) DS731_07165 PF08298 PrkA AAA domain DS731_07165 PF06798 PrkA serine protein kinase C-terminal domain DS731_07175 PF00462 Glutaredoxin DS731_07180 PF07715 TonB-dependent Receptor Plug Domain DS731_07180 PF00593 TonB dependent receptor DS731_07200 PF04324 BFD-like [2Fe-2S] binding domain DS731_07205 PF10417 C-terminal domain of 1-Cys peroxiredoxin DS731_07205 PF00578 AhpC/TSA family DS731_07210 PF00083 Sugar (and other) transporter DS731_07215 PF00929 Exonuclease DS731_07220 PF00691 OmpA family DS731_07220 PF18393 MotY N-terminal domain DS731_07225 PF03009 Glycerophosphoryl diester phosphodiesterase family DS731_07240 PF10576 Iron-sulfur binding domain of endonuclease III DS731_07240 PF00633 Helix-hairpin-helix motif DS731_07240 PF00730 HhH-GPD superfamily base excision DNA repair protein DS731_07245 PF02508 Rnf-Nqr subunit, membrane protein DS731_07255 PF03116 NQR2, RnfD, RnfE family DS731_07260 PF12838 4Fe-4S dicluster domain DS731_07260 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DS731_07260 PF13375 RnfC Barrel sandwich hybrid domain DS731_07260 PF10531 SLBB domain DS731_07265 PF04060 Putative Fe-S cluster DS731_07270 PF02508 Rnf-Nqr subunit, membrane protein DS731_07290 PF00166 Chaperonin 10 Kd subunit DS731_07430 PF02899 Phage integrase, N-terminal SAM-like domain DS731_07430 PF00589 Phage integrase family DS731_07455 PF00436 Single-strand binding protein family DS731_07550 PF13408 Recombinase zinc beta ribbon domain DS731_07550 PF00239 Resolvase, N terminal domain DS731_07550 PF07508 Recombinase DS731_07565 PF01554 MatE DS731_07570 PF12344 Ultra-violet resistance protein B DS731_07570 PF00271 Helicase conserved C-terminal domain DS731_07570 PF17757 UvrB interaction domain DS731_07570 PF02151 UvrB/uvrC motif DS731_07570 PF04851 Type III restriction enzyme, res subunit DS731_07580 PF06508 Queuosine biosynthesis protein QueC DS731_07585 PF04055 Radical SAM superfamily DS731_07595 PF00733 Asparagine synthase DS731_07595 PF13537 Glutamine amidotransferase domain DS731_07615 PF00005 ABC transporter DS731_07620 PF12679 ABC-2 family transporter protein DS731_07625 PF02080 TrkA-C domain DS731_07625 PF03600 Citrate transporter DS731_07630 PF00009 Elongation factor Tu GTP binding domain DS731_07635 PF00459 Inositol monophosphatase family DS731_07645 PF01507 Phosphoadenosine phosphosulfate reductase family DS731_07650 PF00474 Sodium:solute symporter family DS731_07660 PF08281 Sigma-70, region 4 DS731_07660 PF04542 Sigma-70 region 2 DS731_07675 PF13519 von Willebrand factor type A domain DS731_07680 PF00092 von Willebrand factor type A domain DS731_07690 PF01882 Protein of unknown function DUF58 DS731_07695 PF17863 AAA lid domain DS731_07695 PF07726 ATPase family associated with various cellular activities (AAA) DS731_07700 PF02803 Thiolase, C-terminal domain DS731_07700 PF00108 Thiolase, N-terminal domain DS731_07705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DS731_07705 PF00378 Enoyl-CoA hydratase/isomerase DS731_07705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DS731_07715 PF00563 EAL domain DS731_07715 PF03707 Bacterial signalling protein N terminal repeat DS731_07715 PF00990 Diguanylate cyclase, GGDEF domain DS731_07735 PF03471 Transporter associated domain DS731_07735 PF01595 Cyclin M transmembrane N-terminal domain DS731_07735 PF00571 CBS domain DS731_07740 PF01578 Cytochrome C assembly protein DS731_07745 PF00448 SRP54-type protein, GTPase domain DS731_07745 PF02881 SRP54-type protein, helical bundle domain DS731_07745 PF02978 Signal peptide binding domain DS731_07770 PF00873 AcrB/AcrD/AcrF family DS731_07780 PF00005 ABC transporter DS731_07780 PF00664 ABC transporter transmembrane region DS731_07785 PF02954 Bacterial regulatory protein, Fis family DS731_07785 PF00072 Response regulator receiver domain DS731_07785 PF00158 Sigma-54 interaction domain DS731_07790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_07790 PF08448 PAS fold DS731_07790 PF13188 PAS domain DS731_07790 PF00072 Response regulator receiver domain DS731_07790 PF00512 His Kinase A (phospho-acceptor) domain DS731_07795 PF12833 Helix-turn-helix domain DS731_07795 PF00072 Response regulator receiver domain DS731_07800 PF00886 Ribosomal protein S16 DS731_07805 PF01782 RimM N-terminal domain DS731_07805 PF05239 PRC-barrel domain DS731_07810 PF01746 tRNA (Guanine-1)-methyltransferase DS731_07815 PF01245 Ribosomal protein L19 DS731_07820 PF00072 Response regulator receiver domain DS731_07820 PF00196 Bacterial regulatory proteins, luxR family DS731_07825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_07825 PF07730 Histidine kinase DS731_07830 PF00893 Small Multidrug Resistance protein DS731_07835 PF00593 TonB dependent receptor DS731_07835 PF07660 Secretin and TonB N terminus short domain DS731_07835 PF07715 TonB-dependent Receptor Plug Domain DS731_07845 PF00793 DAHP synthetase I family DS731_07850 PF02153 Prephenate dehydrogenase DS731_07850 PF01817 Chorismate mutase type II DS731_07855 PF00593 TonB dependent receptor DS731_07855 PF07715 TonB-dependent Receptor Plug Domain DS731_07870 PF00732 GMC oxidoreductase DS731_07870 PF05199 GMC oxidoreductase DS731_07880 PF01817 Chorismate mutase type II DS731_07880 PF00800 Prephenate dehydratase DS731_07885 PF00072 Response regulator receiver domain DS731_07890 PF01253 Translation initiation factor SUI1 DS731_07900 PF00990 Diguanylate cyclase, GGDEF domain DS731_07900 PF00072 Response regulator receiver domain DS731_07910 PF00563 EAL domain DS731_07910 PF03707 Bacterial signalling protein N terminal repeat DS731_07910 PF00990 Diguanylate cyclase, GGDEF domain DS731_07920 PF00512 His Kinase A (phospho-acceptor) domain DS731_07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_07930 PF00072 Response regulator receiver domain DS731_07930 PF00158 Sigma-54 interaction domain DS731_07940 PF01336 OB-fold nucleic acid binding domain DS731_07940 PF00152 tRNA synthetases class II (D, K and N) DS731_07940 PF02938 GAD domain DS731_07945 PF00293 NUDIX domain DS731_07950 PF02075 Crossover junction endodeoxyribonuclease RuvC DS731_07960 PF05496 Holliday junction DNA helicase RuvB P-loop domain DS731_07960 PF05491 RuvB C-terminal winged helix domain DS731_07960 PF17864 RuvB AAA lid domain DS731_07965 PF03061 Thioesterase superfamily DS731_07970 PF01618 MotA/TolQ/ExbB proton channel family DS731_07975 PF02472 Biopolymer transport protein ExbD/TolR DS731_07985 PF07676 WD40-like Beta Propeller Repeat DS731_07985 PF04052 TolB amino-terminal domain DS731_07990 PF00691 OmpA family DS731_07995 PF13525 Outer membrane lipoprotein DS731_07995 PF16331 TolA binding protein trimerisation DS731_08010 PF02445 Quinolinate synthetase A protein DS731_08025 PF06564 Cellulose biosynthesis protein BcsQ DS731_08040 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) DS731_08045 PF01270 Glycosyl hydrolases family 8 DS731_08050 PF00080 Copper/zinc superoxide dismutase (SODC) DS731_08055 PF08534 Redoxin DS731_08070 PF00873 AcrB/AcrD/AcrF family DS731_08075 PF13533 Biotin-lipoyl like DS731_08080 PF00990 Diguanylate cyclase, GGDEF domain DS731_08090 PF02470 MlaD protein DS731_08095 PF04403 Paraquat-inducible protein A DS731_08100 PF00152 tRNA synthetases class II (D, K and N) DS731_08100 PF01336 OB-fold nucleic acid binding domain DS731_08110 PF01699 Sodium/calcium exchanger protein DS731_08115 PF08443 RimK-like ATP-grasp domain DS731_08115 PF18030 RimK PreATP-grasp domain DS731_08145 PF04055 Radical SAM superfamily DS731_08145 PF06968 Biotin and Thiamin Synthesis associated domain DS731_08150 PF00155 Aminotransferase class I and II DS731_08155 PF08241 Methyltransferase domain DS731_08155 PF12697 Alpha/beta hydrolase family DS731_08165 PF03575 Peptidase family S51 DS731_08175 PF01494 FAD binding domain DS731_08180 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DS731_08180 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DS731_08190 PF01451 Low molecular weight phosphotyrosine protein phosphatase DS731_08195 PF01474 Class-II DAHP synthetase family DS731_08210 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DS731_08210 PF08548 Peptidase M10 serralysin C terminal DS731_08210 PF12708 Pectate lyase superfamily protein DS731_08220 PF00664 ABC transporter transmembrane region DS731_08220 PF00005 ABC transporter DS731_08225 PF04055 Radical SAM superfamily DS731_08225 PF06463 Molybdenum Cofactor Synthesis C DS731_08260 PF00749 tRNA synthetases class I (E and Q), catalytic domain DS731_08300 PF01207 Dihydrouridine synthase (Dus) DS731_08305 PF01979 Amidohydrolase family DS731_08310 PF01979 Amidohydrolase family DS731_08315 PF13472 GDSL-like Lipase/Acylhydrolase family DS731_08320 PF00005 ABC transporter DS731_08335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_08340 PF00873 AcrB/AcrD/AcrF family DS731_08355 PF00291 Pyridoxal-phosphate dependent enzyme DS731_08360 PF01381 Helix-turn-helix DS731_08360 PF07883 Cupin domain DS731_08370 PF01370 NAD dependent epimerase/dehydratase family DS731_08370 PF08338 Domain of unknown function (DUF1731) DS731_08375 PF02152 Dihydroneopterin aldolase DS731_08380 PF01594 AI-2E family transporter DS731_08385 PF00384 Molybdopterin oxidoreductase DS731_08390 PF02634 FdhD/NarQ family DS731_08400 PF00330 Aconitase family (aconitate hydratase) DS731_08400 PF06434 Aconitate hydratase 2 N-terminus DS731_08400 PF11791 Aconitate B N-terminal domain DS731_08405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_08405 PF08918 PhoQ Sensor DS731_08410 PF00486 Transcriptional regulatory protein, C terminal DS731_08410 PF00072 Response regulator receiver domain DS731_08425 PF03795 YCII-related domain DS731_08430 PF00290 Tryptophan synthase alpha chain DS731_08435 PF00291 Pyridoxal-phosphate dependent enzyme DS731_08440 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DS731_08440 PF00218 Indole-3-glycerol phosphate synthase DS731_08445 PF00591 Glycosyl transferase family, a/b domain DS731_08445 PF02885 Glycosyl transferase family, helical bundle domain DS731_08450 PF02885 Glycosyl transferase family, helical bundle domain DS731_08450 PF00591 Glycosyl transferase family, a/b domain DS731_08450 PF00117 Glutamine amidotransferase class-I DS731_08455 PF00425 chorismate binding enzyme DS731_08455 PF04715 Anthranilate synthase component I, N terminal region DS731_08460 PF02811 PHP domain DS731_08465 PF01300 Telomere recombination DS731_08470 PF02616 Segregation and condensation protein ScpA DS731_08475 PF04079 Segregation and condensation complex subunit ScpB DS731_08480 PF01479 S4 domain DS731_08480 PF00849 RNA pseudouridylate synthase DS731_08490 PF00248 Aldo/keto reductase family DS731_08495 PF04286 Protein of unknown function (DUF445) DS731_08500 PF03576 Peptidase family S58 DS731_08510 PF04355 SmpA / OmlA family DS731_08515 PF02463 RecF/RecN/SMC N terminal domain DS731_08520 PF00083 Sugar (and other) transporter DS731_08540 PF00480 ROK family DS731_08545 PF07350 Protein of unknown function (DUF1479) DS731_08570 PF02567 Phenazine biosynthesis-like protein DS731_08600 PF01513 ATP-NAD kinase DS731_08615 PF00561 alpha/beta hydrolase fold DS731_08625 PF00593 TonB dependent receptor DS731_08625 PF07715 TonB-dependent Receptor Plug Domain DS731_08630 PF00196 Bacterial regulatory proteins, luxR family DS731_08630 PF00072 Response regulator receiver domain DS731_08635 PF00512 His Kinase A (phospho-acceptor) domain DS731_08635 PF01627 Hpt domain DS731_08635 PF00072 Response regulator receiver domain DS731_08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_08635 PF00672 HAMP domain DS731_08640 PF01025 GrpE DS731_08645 PF00012 Hsp70 protein DS731_08650 PF00226 DnaJ domain DS731_08650 PF01556 DnaJ C terminal domain DS731_08650 PF00684 DnaJ central domain DS731_08655 PF13276 HTH-like domain DS731_08655 PF13333 Integrase core domain DS731_08655 PF00665 Integrase core domain DS731_08665 PF11849 Domain of unknown function (DUF3369) DS731_08670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_08670 PF00512 His Kinase A (phospho-acceptor) domain DS731_08670 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_08680 PF18370 Rhamnogalacturonan I lyases beta-sheet domain DS731_08695 PF04703 FaeA-like protein DS731_08695 PF00072 Response regulator receiver domain DS731_08700 PF17203 Single cache domain 3 DS731_08700 PF00989 PAS fold DS731_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_08700 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DS731_08705 PF01970 Tripartite tricarboxylate transporter TctA family DS731_08725 PF00135 Carboxylesterase family DS731_08740 PF00732 GMC oxidoreductase DS731_08740 PF05199 GMC oxidoreductase DS731_08750 PF00990 Diguanylate cyclase, GGDEF domain DS731_08750 PF07694 5TMR of 5TMR-LYT DS731_08755 PF03466 LysR substrate binding domain DS731_08755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_08760 PF03737 Aldolase/RraA DS731_08765 PF04303 PrpF protein DS731_08770 PF04909 Amidohydrolase DS731_08790 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) DS731_08800 PF07732 Multicopper oxidase DS731_08800 PF00394 Multicopper oxidase DS731_08800 PF07731 Multicopper oxidase DS731_08820 PF00072 Response regulator receiver domain DS731_08820 PF00672 HAMP domain DS731_08820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_08820 PF00512 His Kinase A (phospho-acceptor) domain DS731_08820 PF01627 Hpt domain DS731_08820 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DS731_08825 PF00072 Response regulator receiver domain DS731_08825 PF02954 Bacterial regulatory protein, Fis family DS731_08845 PF00072 Response regulator receiver domain DS731_08850 PF02371 Transposase IS116/IS110/IS902 family DS731_08850 PF01548 Transposase DS731_08860 PF04972 BON domain DS731_08870 PF04333 MlaA lipoprotein DS731_08890 PF07043 Protein of unknown function (DUF1328) DS731_08905 PF00114 Pilin (bacterial filament) DS731_08905 PF07963 Prokaryotic N-terminal methylation motif DS731_08930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_08930 PF00512 His Kinase A (phospho-acceptor) domain DS731_08930 PF18415 Histidine kinase receptor ArcB trans-membrane domain DS731_08930 PF01627 Hpt domain DS731_08930 PF00989 PAS fold DS731_08930 PF00072 Response regulator receiver domain DS731_08935 PF00072 Response regulator receiver domain DS731_08940 PF08446 PAS fold DS731_08940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_08940 PF00512 His Kinase A (phospho-acceptor) domain DS731_08940 PF00360 Phytochrome region DS731_08940 PF01590 GAF domain DS731_08950 PF00072 Response regulator receiver domain DS731_08950 PF02954 Bacterial regulatory protein, Fis family DS731_08950 PF00158 Sigma-54 interaction domain DS731_08955 PF03707 Bacterial signalling protein N terminal repeat DS731_08955 PF00990 Diguanylate cyclase, GGDEF domain DS731_08955 PF00563 EAL domain DS731_08960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_08960 PF03466 LysR substrate binding domain DS731_08970 PF01022 Bacterial regulatory protein, arsR family DS731_08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_08985 PF03466 LysR substrate binding domain DS731_09005 PF10459 Peptidase S46 DS731_09010 PF12706 Beta-lactamase superfamily domain DS731_09010 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DS731_09010 PF17770 Ribonuclease J C-terminal domain DS731_09015 PF00563 EAL domain DS731_09015 PF03707 Bacterial signalling protein N terminal repeat DS731_09015 PF00990 Diguanylate cyclase, GGDEF domain DS731_09020 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DS731_09025 PF01799 [2Fe-2S] binding domain DS731_09025 PF00111 2Fe-2S iron-sulfur cluster binding domain DS731_09030 PF00501 AMP-binding enzyme DS731_09045 PF17946 RecC C-terminal domain DS731_09050 PF00580 UvrD/REP helicase N-terminal domain DS731_09050 PF13361 UvrD-like helicase C-terminal domain DS731_09050 PF12705 PD-(D/E)XK nuclease superfamily DS731_09055 PF13538 UvrD-like helicase C-terminal domain DS731_09075 PF00899 ThiF family DS731_09080 PF00994 Probable molybdopterin binding domain DS731_09085 PF01967 MoaC family DS731_09090 PF02597 ThiS family DS731_09095 PF02391 MoaE protein DS731_09105 PF00528 Binding-protein-dependent transport system inner membrane component DS731_09110 PF03459 TOBE domain DS731_09110 PF10649 Protein of unknown function (DUF2478) DS731_09110 PF00005 ABC transporter DS731_09115 PF06969 HemN C-terminal domain DS731_09115 PF04055 Radical SAM superfamily DS731_09120 PF07715 TonB-dependent Receptor Plug Domain DS731_09120 PF00593 TonB dependent receptor DS731_09140 PF01329 Pterin 4 alpha carbinolamine dehydratase DS731_09155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_09155 PF00512 His Kinase A (phospho-acceptor) domain DS731_09155 PF18415 Histidine kinase receptor ArcB trans-membrane domain DS731_09155 PF00072 Response regulator receiver domain DS731_09155 PF00989 PAS fold DS731_09155 PF01627 Hpt domain DS731_09160 PF00072 Response regulator receiver domain DS731_09165 PF02576 RimP N-terminal domain DS731_09165 PF17384 RimP C-terminal SH3 domain DS731_09170 PF08529 NusA N-terminal domain DS731_09170 PF13184 NusA-like KH domain DS731_09170 PF00575 S1 RNA binding domain DS731_09175 PF00009 Elongation factor Tu GTP binding domain DS731_09175 PF04760 Translation initiation factor IF-2, N-terminal region DS731_09175 PF11987 Translation-initiation factor 2 DS731_09175 PF08364 Bacterial translation initiation factor IF-2 associated region DS731_09180 PF02033 Ribosome-binding factor A DS731_09185 PF01509 TruB family pseudouridylate synthase (N terminal domain) DS731_09185 PF16198 tRNA pseudouridylate synthase B C-terminal domain DS731_09185 PF09157 Pseudouridine synthase II TruB, C-terminal DS731_09190 PF00312 Ribosomal protein S15 DS731_09200 PF00583 Acetyltransferase (GNAT) family DS731_09200 PF00795 Carbon-nitrogen hydrolase DS731_09210 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DS731_09210 PF00672 HAMP domain DS731_09210 PF00072 Response regulator receiver domain DS731_09210 PF01627 Hpt domain DS731_09210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_09210 PF00512 His Kinase A (phospho-acceptor) domain DS731_09215 PF00990 Diguanylate cyclase, GGDEF domain DS731_09215 PF00072 Response regulator receiver domain DS731_09225 PF10417 C-terminal domain of 1-Cys peroxiredoxin DS731_09225 PF00578 AhpC/TSA family DS731_09230 PF13192 Thioredoxin domain DS731_09230 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS731_09240 PF00440 Bacterial regulatory proteins, tetR family DS731_09245 PF13533 Biotin-lipoyl like DS731_09250 PF00873 AcrB/AcrD/AcrF family DS731_09265 PF11842 Domain of unknown function (DUF3362) DS731_09265 PF08497 Radical SAM N-terminal DS731_09265 PF04055 Radical SAM superfamily DS731_09280 PF01979 Amidohydrolase family DS731_09285 PF00360 Phytochrome region DS731_09285 PF00563 EAL domain DS731_09285 PF01590 GAF domain DS731_09285 PF00990 Diguanylate cyclase, GGDEF domain DS731_09295 PF01479 S4 domain DS731_09295 PF00849 RNA pseudouridylate synthase DS731_09320 PF12307 Protein of unknown function (DUF3631) DS731_09350 PF00589 Phage integrase family DS731_09350 PF13356 Arm DNA-binding domain DS731_09380 PF04542 Sigma-70 region 2 DS731_09380 PF04545 Sigma-70, region 4 DS731_09385 PF09905 DNA-binding protein VF530 DS731_09390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DS731_09390 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS731_09395 PF01668 SmpB protein DS731_09400 PF03364 Polyketide cyclase / dehydrase and lipid transport DS731_09405 PF03658 RnfH family Ubiquitin DS731_09415 PF02028 BCCT, betaine/carnitine/choline family transporter DS731_09420 PF00593 TonB dependent receptor DS731_09420 PF07715 TonB-dependent Receptor Plug Domain DS731_09425 PF13181 Tetratricopeptide repeat DS731_09430 PF03618 Kinase/pyrophosphorylase DS731_09435 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DS731_09435 PF00391 PEP-utilising enzyme, mobile domain DS731_09435 PF02896 PEP-utilising enzyme, TIM barrel domain DS731_09455 PF08007 Cupin superfamily protein DS731_09460 PF16701 Adenylate cyclase regulatory domain DS731_09460 PF00211 Adenylate and Guanylate cyclase catalytic domain DS731_09465 PF08328 Adenylosuccinate lyase C-terminal DS731_09465 PF00206 Lyase DS731_09470 PF04356 Protein of unknown function (DUF489) DS731_09480 PF00849 RNA pseudouridylate synthase DS731_09485 PF03971 Monomeric isocitrate dehydrogenase DS731_09490 PF00313 'Cold-shock' DNA-binding domain DS731_09495 PF02617 ATP-dependent Clp protease adaptor protein ClpS DS731_09500 PF17871 AAA lid domain DS731_09500 PF07724 AAA domain (Cdc48 subfamily) DS731_09500 PF10431 C-terminal, D2-small domain, of ClpB protein DS731_09500 PF00004 ATPase family associated with various cellular activities (AAA) DS731_09500 PF02861 Clp amino terminal domain, pathogenicity island component DS731_09505 PF01176 Translation initiation factor 1A / IF-1 DS731_09510 PF04376 Arginine-tRNA-protein transferase, N terminus DS731_09510 PF04377 Arginine-tRNA-protein transferase, C terminus DS731_09515 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DS731_09520 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS731_09525 PF04217 Protein of unknown function, DUF412 DS731_09530 PF17283 SprT-like zinc ribbon domain DS731_09530 PF10263 SprT-like family DS731_09535 PF01343 Peptidase family S49 DS731_09540 PF00881 Nitroreductase family DS731_09545 PF02887 Pyruvate kinase, alpha/beta domain DS731_09545 PF00224 Pyruvate kinase, barrel domain DS731_09550 PF01418 Helix-turn-helix domain, rpiR family DS731_09550 PF01380 SIS domain DS731_09555 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DS731_09555 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DS731_09560 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DS731_09565 PF00920 Dehydratase family DS731_09570 PF02685 Glucokinase DS731_09575 PF01081 KDPG and KHG aldolase DS731_09590 PF01263 Aldose 1-epimerase DS731_09595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DS731_09595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DS731_09600 PF02446 4-alpha-glucanotransferase DS731_09605 PF00128 Alpha amylase, catalytic domain DS731_09605 PF02806 Alpha amylase, C-terminal all-beta domain DS731_09605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DS731_09610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DS731_09610 PF00128 Alpha amylase, catalytic domain DS731_09615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DS731_09615 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DS731_09620 PF01641 SelR domain DS731_09630 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DS731_09630 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DS731_09635 PF18027 Cytosolic carboxypeptidase N-terminal domain DS731_09635 PF00246 Zinc carboxypeptidase DS731_09640 PF01235 Sodium:alanine symporter family DS731_09650 PF07023 Protein of unknown function (DUF1315) DS731_09670 PF00710 Asparaginase, N-terminal DS731_09670 PF17763 Glutaminase/Asparaginase C-terminal domain DS731_09685 PF00563 EAL domain DS731_09685 PF00990 Diguanylate cyclase, GGDEF domain DS731_09685 PF03707 Bacterial signalling protein N terminal repeat DS731_09690 PF04055 Radical SAM superfamily DS731_09690 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DS731_09695 PF03099 Biotin/lipoate A/B protein ligase family DS731_09700 PF04359 Protein of unknown function (DUF493) DS731_09705 PF00768 D-alanyl-D-alanine carboxypeptidase DS731_09705 PF07943 Penicillin-binding protein 5, C-terminal domain DS731_09710 PF05036 Sporulation related domain DS731_09710 PF03330 Lytic transglycolase DS731_09715 PF01098 Cell cycle protein DS731_09720 PF03717 Penicillin-binding Protein dimerisation domain DS731_09720 PF00905 Penicillin binding protein transpeptidase domain DS731_09725 PF02590 Predicted SPOUT methyltransferase DS731_09740 PF04390 Lipopolysaccharide-assembly DS731_09745 PF08264 Anticodon-binding domain of tRNA DS731_09745 PF13603 Leucyl-tRNA synthetase, Domain 2 DS731_09745 PF00133 tRNA synthetases class I (I, L, M and V) DS731_09755 PF05362 Lon protease (S16) C-terminal proteolytic domain DS731_09755 PF13654 AAA domain DS731_09765 PF00106 short chain dehydrogenase DS731_09770 PF01985 CRS1 / YhbY (CRM) domain DS731_09775 PF01434 Peptidase family M41 DS731_09775 PF06480 FtsH Extracellular DS731_09775 PF17862 AAA+ lid domain DS731_09775 PF00004 ATPase family associated with various cellular activities (AAA) DS731_09780 PF00809 Pterin binding enzyme DS731_09785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DS731_09785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DS731_09785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DS731_09785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DS731_09795 PF03840 Preprotein translocase SecG subunit DS731_09845 PF01548 Transposase DS731_09845 PF02371 Transposase IS116/IS110/IS902 family DS731_09855 PF02511 Thymidylate synthase complementing protein DS731_09890 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DS731_09890 PF01612 3'-5' exonuclease DS731_09890 PF00476 DNA polymerase family A DS731_09890 PF01367 5'-3' exonuclease, C-terminal SAM fold DS731_09900 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DS731_09900 PF14490 Helix-hairpin-helix containing domain DS731_09900 PF13538 UvrD-like helicase C-terminal domain DS731_09995 PF00692 dUTPase DS731_10105 PF00462 Glutaredoxin DS731_10190 PF02075 Crossover junction endodeoxyribonuclease RuvC DS731_10225 PF01679 Proteolipid membrane potential modulator DS731_10230 PF10011 Predicted membrane protein (DUF2254) DS731_10235 PF00781 Diacylglycerol kinase catalytic domain DS731_10255 PF00474 Sodium:solute symporter family DS731_10280 PF00575 S1 RNA binding domain DS731_10280 PF03725 3' exoribonuclease family, domain 2 DS731_10280 PF01138 3' exoribonuclease family, domain 1 DS731_10280 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DS731_10280 PF00013 KH domain DS731_10290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DS731_10295 PF13181 Tetratricopeptide repeat DS731_10295 PF07719 Tetratricopeptide repeat DS731_10310 PF02463 RecF/RecN/SMC N terminal domain DS731_10310 PF06470 SMC proteins Flexible Hinge Domain DS731_10315 PF04354 ZipA, C-terminal FtsZ-binding domain DS731_10320 PF00533 BRCA1 C Terminus (BRCT) domain DS731_10320 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DS731_10320 PF12826 Helix-hairpin-helix motif DS731_10320 PF01653 NAD-dependent DNA ligase adenylation domain DS731_10320 PF03120 NAD-dependent DNA ligase OB-fold domain DS731_10330 PF03772 Competence protein DS731_10330 PF13567 Domain of unknown function (DUF4131) DS731_10330 PF00753 Metallo-beta-lactamase superfamily DS731_10335 PF00005 ABC transporter DS731_10335 PF00664 ABC transporter transmembrane region DS731_10340 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DS731_10345 PF03966 Trm112p-like protein DS731_10350 PF02348 Cytidylyltransferase DS731_10355 PF00106 short chain dehydrogenase DS731_10365 PF04055 Radical SAM superfamily DS731_10365 PF00919 Uncharacterized protein family UPF0004 DS731_10365 PF18693 TRAM domain DS731_10380 PF00899 ThiF family DS731_10385 PF13409 Glutathione S-transferase, N-terminal domain DS731_10390 PF02678 Pirin DS731_10390 PF05726 Pirin C-terminal cupin domain DS731_10395 PF00483 Nucleotidyl transferase DS731_10395 PF01050 Mannose-6-phosphate isomerase DS731_10400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DS731_10400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DS731_10400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DS731_10400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DS731_10410 PF00285 Citrate synthase, C-terminal domain DS731_10415 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DS731_10420 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DS731_10425 PF02910 Fumarate reductase flavoprotein C-term DS731_10425 PF00890 FAD binding domain DS731_10430 PF13085 2Fe-2S iron-sulfur cluster binding domain DS731_10435 PF02779 Transketolase, pyrimidine binding domain DS731_10435 PF16870 2-oxoglutarate dehydrogenase C-terminal DS731_10435 PF00676 Dehydrogenase E1 component DS731_10435 PF16078 2-oxoglutarate dehydrogenase N-terminus DS731_10440 PF00364 Biotin-requiring enzyme DS731_10440 PF02817 e3 binding domain DS731_10440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DS731_10445 PF00549 CoA-ligase DS731_10445 PF08442 ATP-grasp domain DS731_10450 PF00549 CoA-ligase DS731_10450 PF02629 CoA binding domain DS731_10455 PF00672 HAMP domain DS731_10455 PF16591 Helical bimodular sensor domain DS731_10455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_10480 PF00128 Alpha amylase, catalytic domain DS731_10480 PF16657 Maltogenic Amylase, C-terminal domain DS731_10500 PF09087 Cyclomaltodextrinase, N-terminal DS731_10500 PF10438 Cyclo-malto-dextrinase C-terminal domain DS731_10500 PF00128 Alpha amylase, catalytic domain DS731_10510 PF00686 Starch binding domain DS731_10510 PF00128 Alpha amylase, catalytic domain DS731_10515 PF00356 Bacterial regulatory proteins, lacI family DS731_10520 PF00749 tRNA synthetases class I (E and Q), catalytic domain DS731_10520 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DS731_10530 PF00106 short chain dehydrogenase DS731_10535 PF12262 Bacterial virulence factor lipase N-terminal DS731_10555 PF08496 Peptidase family S49 N-terminal DS731_10555 PF01343 Peptidase family S49 DS731_10560 PF00440 Bacterial regulatory proteins, tetR family DS731_10565 PF01784 NIF3 (NGG1p interacting factor 3) DS731_10570 PF13847 Methyltransferase domain DS731_10575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DS731_10575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DS731_10580 PF00255 Glutathione peroxidase DS731_10585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DS731_10585 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DS731_10595 PF00171 Aldehyde dehydrogenase family DS731_10600 PF02770 Acyl-CoA dehydrogenase, middle domain DS731_10600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DS731_10600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DS731_10605 PF00378 Enoyl-CoA hydratase/isomerase DS731_10610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DS731_10610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DS731_10615 PF13847 Methyltransferase domain DS731_10620 PF00884 Sulfatase DS731_10620 PF11893 Domain of unknown function (DUF3413) DS731_10625 PF07208 Protein of unknown function (DUF1414) DS731_10630 PF04245 37-kD nucleoid-associated bacterial protein DS731_10660 PF07694 5TMR of 5TMR-LYT DS731_10660 PF06580 Histidine kinase DS731_10665 PF04397 LytTr DNA-binding domain DS731_10665 PF00072 Response regulator receiver domain DS731_10670 PF00365 Phosphofructokinase DS731_10680 PF00892 EamA-like transporter family DS731_10685 PF00989 PAS fold DS731_10685 PF01627 Hpt domain DS731_10685 PF00512 His Kinase A (phospho-acceptor) domain DS731_10685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_10685 PF00072 Response regulator receiver domain DS731_10685 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_10705 PF00270 DEAD/DEAH box helicase DS731_10705 PF00271 Helicase conserved C-terminal domain DS731_10710 PF01144 Coenzyme A transferase DS731_10715 PF01144 Coenzyme A transferase DS731_10720 PF03466 LysR substrate binding domain DS731_10720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_10740 PF03466 LysR substrate binding domain DS731_10740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_10745 PF03315 Serine dehydratase beta chain DS731_10745 PF03313 Serine dehydratase alpha chain DS731_10750 PF00293 NUDIX domain DS731_10755 PF00425 chorismate binding enzyme DS731_10755 PF04715 Anthranilate synthase component I, N terminal region DS731_10765 PF02646 RmuC family DS731_10775 PF02371 Transposase IS116/IS110/IS902 family DS731_10775 PF01548 Transposase DS731_10850 PF00132 Bacterial transferase hexapeptide (six repeats) DS731_10870 PF00082 Subtilase family DS731_10870 PF02225 PA domain DS731_10870 PF05922 Peptidase inhibitor I9 DS731_10870 PF13860 FlgD Ig-like domain DS731_10880 PF00676 Dehydrogenase E1 component DS731_10885 PF02780 Transketolase, C-terminal domain DS731_10885 PF02779 Transketolase, pyrimidine binding domain DS731_10890 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DS731_10890 PF00364 Biotin-requiring enzyme DS731_10890 PF02817 e3 binding domain DS731_10895 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DS731_10900 PF00069 Protein kinase domain DS731_10910 PF00266 Aminotransferase class-V DS731_10925 PF07670 Nucleoside recognition DS731_10935 PF13185 GAF domain DS731_10945 PF17516 ProQ C-terminal domain DS731_10945 PF04352 ProQ/FINO family DS731_10950 PF11818 C-terminal domain of tail specific protease (DUF3340) DS731_10950 PF00595 PDZ domain DS731_10950 PF03572 Peptidase family S41 DS731_10950 PF17804 Tail specific protease N-terminal domain DS731_10955 PF00209 Sodium:neurotransmitter symporter family DS731_10965 PF11940 Domain of unknown function (DUF3458) Ig-like fold DS731_10965 PF01433 Peptidase family M1 domain DS731_10965 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DS731_10980 PF07044 Protein of unknown function (DUF1329) DS731_10995 PF05088 Bacterial NAD-glutamate dehydrogenase DS731_11000 PF01180 Dihydroorotate dehydrogenase DS731_11005 PF02926 THUMP domain DS731_11005 PF01170 Putative RNA methylase family UPF0020 DS731_11005 PF10672 S-adenosylmethionine-dependent methyltransferase DS731_11025 PF04957 Ribosome modulation factor DS731_11030 PF07977 FabA-like domain DS731_11040 PF03441 FAD binding domain of DNA photolyase DS731_11040 PF00875 DNA photolyase DS731_11045 PF03441 FAD binding domain of DNA photolyase DS731_11045 PF00875 DNA photolyase DS731_11050 PF00875 DNA photolyase DS731_11050 PF03441 FAD binding domain of DNA photolyase DS731_11055 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DS731_11090 PF02899 Phage integrase, N-terminal SAM-like domain DS731_11090 PF00589 Phage integrase family DS731_11110 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DS731_11115 PF00326 Prolyl oligopeptidase family DS731_11115 PF07676 WD40-like Beta Propeller Repeat DS731_11130 PF00593 TonB dependent receptor DS731_11140 PF00582 Universal stress protein family DS731_11145 PF01645 Conserved region in glutamate synthase DS731_11150 PF00999 Sodium/hydrogen exchanger family DS731_11150 PF02254 TrkA-N domain DS731_11155 PF00210 Ferritin-like domain DS731_11160 PF00210 Ferritin-like domain DS731_11170 PF00115 Cytochrome C and Quinol oxidase polypeptide I DS731_11185 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DS731_11185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DS731_11195 PF00403 Heavy-metal-associated domain DS731_11210 PF13545 Crp-like helix-turn-helix domain DS731_11210 PF00027 Cyclic nucleotide-binding domain DS731_11215 PF00582 Universal stress protein family DS731_11220 PF01171 PP-loop family DS731_11225 PF01734 Patatin-like phospholipase DS731_11245 PF01810 LysE type translocator DS731_11250 PF02146 Sir2 family DS731_11255 PF00581 Rhodanese-like domain DS731_11275 PF01066 CDP-alcohol phosphatidyltransferase DS731_11280 PF01541 GIY-YIG catalytic domain DS731_11280 PF08459 UvrC Helix-hairpin-helix N-terminal DS731_11280 PF02151 UvrB/uvrC motif DS731_11285 PF00196 Bacterial regulatory proteins, luxR family DS731_11285 PF00072 Response regulator receiver domain DS731_11290 PF02678 Pirin DS731_11290 PF17954 Quercetinase C-terminal cupin domain DS731_11295 PF00155 Aminotransferase class I and II DS731_11315 PF01027 Inhibitor of apoptosis-promoting Bax1 DS731_11325 PF02635 DsrE/DsrF-like family DS731_11335 PF04358 DsrC like protein DS731_11340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DS731_11340 PF02403 Seryl-tRNA synthetase N-terminal domain DS731_11345 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DS731_11350 PF12002 MgsA AAA+ ATPase C terminal DS731_11350 PF00004 ATPase family associated with various cellular activities (AAA) DS731_11350 PF16193 AAA C-terminal domain DS731_11355 PF03548 Outer membrane lipoprotein carrier protein LolA DS731_11360 PF09397 Ftsk gamma domain DS731_11360 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DS731_11360 PF17854 FtsK alpha domain DS731_11360 PF01580 FtsK/SpoIIIE family DS731_11365 PF01037 Lrp/AsnC ligand binding domain DS731_11370 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DS731_11370 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DS731_11375 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DS731_11380 PF18073 Rubredoxin metal binding domain DS731_11385 PF06305 Lipopolysaccharide assembly protein A domain DS731_11395 PF00216 Bacterial DNA-binding protein DS731_11400 PF00575 S1 RNA binding domain DS731_11405 PF02224 Cytidylate kinase DS731_11410 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DS731_11415 PF00266 Aminotransferase class-V DS731_11420 PF00521 DNA gyrase/topoisomerase IV, subunit A DS731_11420 PF03989 DNA gyrase C-terminal domain, beta-propeller DS731_11430 PF00317 Ribonucleotide reductase, all-alpha domain DS731_11430 PF02867 Ribonucleotide reductase, barrel domain DS731_11430 PF03477 ATP cone domain DS731_11435 PF00268 Ribonucleotide reductase, small chain DS731_11440 PF00111 2Fe-2S iron-sulfur cluster binding domain DS731_11450 PF08207 Elongation factor P (EF-P) KOW-like domain DS731_11450 PF09285 Elongation factor P, C-terminal DS731_11450 PF01132 Elongation factor P (EF-P) OB domain DS731_11455 PF00114 Pilin (bacterial filament) DS731_11455 PF07963 Prokaryotic N-terminal methylation motif DS731_11460 PF00892 EamA-like transporter family DS731_11465 PF01259 SAICAR synthetase DS731_11470 PF06804 NlpB/DapX lipoprotein DS731_11475 PF00701 Dihydrodipicolinate synthetase family DS731_11485 PF00578 AhpC/TSA family DS731_11490 PF01594 AI-2E family transporter DS731_11495 PF01435 Peptidase family M48 DS731_11500 PF00578 AhpC/TSA family DS731_11505 PF03960 ArsC family DS731_11510 PF03358 NADPH-dependent FMN reductase DS731_11520 PF00308 Bacterial dnaA protein DS731_11530 PF00586 AIR synthase related protein, N-terminal domain DS731_11530 PF02769 AIR synthase related protein, C-terminal domain DS731_11535 PF00551 Formyl transferase DS731_11545 PF09317 Domain of unknown function (DUF1974) DS731_11545 PF02770 Acyl-CoA dehydrogenase, middle domain DS731_11545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DS731_11545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DS731_11550 PF00072 Response regulator receiver domain DS731_11550 PF00196 Bacterial regulatory proteins, luxR family DS731_11555 PF13649 Methyltransferase domain DS731_11560 PF08003 Protein of unknown function (DUF1698) DS731_11580 PF00128 Alpha amylase, catalytic domain DS731_11585 PF03454 MoeA C-terminal region (domain IV) DS731_11585 PF00994 Probable molybdopterin binding domain DS731_11585 PF03453 MoeA N-terminal region (domain I and II) DS731_11590 PF01554 MatE DS731_11605 PF02625 XdhC and CoxI family DS731_11605 PF13478 XdhC Rossmann domain DS731_11610 PF00291 Pyridoxal-phosphate dependent enzyme DS731_11625 PF00378 Enoyl-CoA hydratase/isomerase DS731_11640 PF00732 GMC oxidoreductase DS731_11640 PF05199 GMC oxidoreductase DS731_11650 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DS731_11650 PF00326 Prolyl oligopeptidase family DS731_11655 PF00255 Glutathione peroxidase DS731_11660 PF01053 Cys/Met metabolism PLP-dependent enzyme DS731_11670 PF00155 Aminotransferase class I and II DS731_11685 PF00873 AcrB/AcrD/AcrF family DS731_11690 PF13533 Biotin-lipoyl like DS731_11700 PF01012 Electron transfer flavoprotein domain DS731_11700 PF00766 Electron transfer flavoprotein FAD-binding domain DS731_11705 PF01012 Electron transfer flavoprotein domain DS731_11720 PF12697 Alpha/beta hydrolase family DS731_11730 PF00258 Flavodoxin DS731_11735 PF02743 Cache domain DS731_11735 PF00672 HAMP domain DS731_11735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_11740 PF01475 Ferric uptake regulator family DS731_11745 PF01063 Amino-transferase class IV DS731_11750 PF02626 Carboxyltransferase domain, subdomain A and B DS731_11755 PF02682 Carboxyltransferase domain, subdomain C and D DS731_11760 PF03746 LamB/YcsF family DS731_11765 PF17783 CvfB-like winged helix domain DS731_11765 PF13509 S1 domain DS731_11770 PF02566 OsmC-like protein DS731_11780 PF13533 Biotin-lipoyl like DS731_11785 PF00873 AcrB/AcrD/AcrF family DS731_11790 PF00873 AcrB/AcrD/AcrF family DS731_11800 PF00155 Aminotransferase class I and II DS731_11810 PF01966 HD domain DS731_11810 PF13286 Phosphohydrolase-associated domain DS731_11815 PF00174 Oxidoreductase molybdopterin binding domain DS731_11820 PF01794 Ferric reductase like transmembrane component DS731_11825 PF01042 Endoribonuclease L-PSP DS731_11830 PF00034 Cytochrome c DS731_11830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DS731_11835 PF01266 FAD dependent oxidoreductase DS731_11845 PF02810 SEC-C motif DS731_11850 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DS731_11860 PF01026 TatD related DNase DS731_11865 PF09115 DNA polymerase III, delta subunit, C terminal DS731_11870 PF02223 Thymidylate kinase DS731_11875 PF02618 YceG-like family DS731_11880 PF01063 Amino-transferase class IV DS731_11885 PF00109 Beta-ketoacyl synthase, N-terminal domain DS731_11885 PF02801 Beta-ketoacyl synthase, C-terminal domain DS731_11890 PF00550 Phosphopantetheine attachment site DS731_11900 PF00698 Acyl transferase domain DS731_11905 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DS731_11905 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DS731_11910 PF02504 Fatty acid synthesis protein DS731_11915 PF01783 Ribosomal L32p protein family DS731_11920 PF02620 Large ribosomal RNA subunit accumulation protein YceD DS731_11925 PF02545 Maf-like protein DS731_11930 PF13419 Haloacid dehalogenase-like hydrolase DS731_11935 PF01479 S4 domain DS731_11935 PF00849 RNA pseudouridylate synthase DS731_11945 PF12111 Polyribonucleotide phosphorylase C terminal DS731_11945 PF10150 Ribonuclease E/G family DS731_11945 PF00575 S1 RNA binding domain DS731_11955 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) DS731_11960 PF01131 DNA topoisomerase DS731_11960 PF01396 Topoisomerase DNA binding C4 zinc finger DS731_11960 PF08272 Topoisomerase I zinc-ribbon-like DS731_11960 PF01751 Toprim domain DS731_11965 PF04996 Succinylarginine dihydrolase DS731_11970 PF02369 Bacterial Ig-like domain (group 1) DS731_11970 PF11924 Inverse autotransporter, beta-domain DS731_11970 PF09134 Invasin, domain 3 DS731_11975 PF00375 Sodium:dicarboxylate symporter family DS731_11980 PF12704 MacB-like periplasmic core domain DS731_11980 PF02687 FtsX-like permease family DS731_11985 PF00005 ABC transporter DS731_12020 PF00929 Exonuclease DS731_12025 PF00075 RNase H DS731_12040 PF13533 Biotin-lipoyl like DS731_12045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_12045 PF00672 HAMP domain DS731_12065 PF00107 Zinc-binding dehydrogenase DS731_12070 PF17785 PUA-like domain DS731_12070 PF10672 S-adenosylmethionine-dependent methyltransferase DS731_12080 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DS731_12080 PF00271 Helicase conserved C-terminal domain DS731_12080 PF00270 DEAD/DEAH box helicase DS731_12080 PF11898 Domain of unknown function (DUF3418) DS731_12080 PF04408 Helicase associated domain (HA2) DS731_12090 PF13276 HTH-like domain DS731_12090 PF00665 Integrase core domain DS731_12090 PF13333 Integrase core domain DS731_12100 PF00990 Diguanylate cyclase, GGDEF domain DS731_12100 PF00072 Response regulator receiver domain DS731_12110 PF02333 Phytase DS731_12120 PF01112 Asparaginase DS731_12125 PF08411 Exonuclease C-terminal DS731_12125 PF00929 Exonuclease DS731_12135 PF05230 MASE2 domain DS731_12135 PF00990 Diguanylate cyclase, GGDEF domain DS731_12145 PF05922 Peptidase inhibitor I9 DS731_12145 PF00082 Subtilase family DS731_12150 PF02803 Thiolase, C-terminal domain DS731_12150 PF00108 Thiolase, N-terminal domain DS731_12155 PF13411 MerR HTH family regulatory protein DS731_12160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DS731_12160 PF02770 Acyl-CoA dehydrogenase, middle domain DS731_12160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DS731_12165 PF01039 Carboxyl transferase domain DS731_12170 PF00378 Enoyl-CoA hydratase/isomerase DS731_12175 PF00289 Biotin carboxylase, N-terminal domain DS731_12175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DS731_12175 PF02785 Biotin carboxylase C-terminal domain DS731_12175 PF00364 Biotin-requiring enzyme DS731_12180 PF00682 HMGL-like DS731_12195 PF01156 Inosine-uridine preferring nucleoside hydrolase DS731_12200 PF00483 Nucleotidyl transferase DS731_12215 PF08668 HDOD domain DS731_12230 PF02657 Fe-S metabolism associated domain DS731_12250 PF00563 EAL domain DS731_12250 PF00990 Diguanylate cyclase, GGDEF domain DS731_12250 PF03707 Bacterial signalling protein N terminal repeat DS731_12255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_12255 PF08446 PAS fold DS731_12255 PF00360 Phytochrome region DS731_12255 PF01590 GAF domain DS731_12255 PF00512 His Kinase A (phospho-acceptor) domain DS731_12265 PF03372 Endonuclease/Exonuclease/phosphatase family DS731_12275 PF01965 DJ-1/PfpI family DS731_12280 PF00156 Phosphoribosyl transferase domain DS731_12285 PF02687 FtsX-like permease family DS731_12285 PF12704 MacB-like periplasmic core domain DS731_12295 PF03461 TRCF domain DS731_12295 PF02559 CarD-like/TRCF domain DS731_12295 PF00270 DEAD/DEAH box helicase DS731_12295 PF00271 Helicase conserved C-terminal domain DS731_12295 PF17757 UvrB interaction domain DS731_12305 PF00939 Sodium:sulfate symporter transmembrane region DS731_12310 PF04073 Aminoacyl-tRNA editing domain DS731_12320 PF00216 Bacterial DNA-binding protein DS731_12325 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DS731_12325 PF03483 B3/4 domain DS731_12325 PF03484 tRNA synthetase B5 domain DS731_12325 PF03147 Ferredoxin-fold anticodon binding domain DS731_12325 PF01588 Putative tRNA binding domain DS731_12330 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DS731_12330 PF01409 tRNA synthetases class II core domain (F) DS731_12335 PF00453 Ribosomal protein L20 DS731_12340 PF01632 Ribosomal protein L35 DS731_12345 PF05198 Translation initiation factor IF-3, N-terminal domain DS731_12345 PF00707 Translation initiation factor IF-3, C-terminal domain DS731_12350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DS731_12350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DS731_12350 PF02824 TGS domain DS731_12350 PF03129 Anticodon binding domain DS731_12370 PF07152 YaeQ protein DS731_12390 PF00581 Rhodanese-like domain DS731_12395 PF01425 Amidase DS731_12405 PF01925 Sulfite exporter TauE/SafE DS731_12410 PF00266 Aminotransferase class-V DS731_12415 PF07687 Peptidase dimerisation domain DS731_12415 PF01546 Peptidase family M20/M25/M40 DS731_12425 PF00962 Adenosine/AMP deaminase DS731_12430 PF00860 Permease family DS731_12435 PF07715 TonB-dependent Receptor Plug Domain DS731_12435 PF00593 TonB dependent receptor DS731_12445 PF00962 Adenosine/AMP deaminase DS731_12450 PF00860 Permease family DS731_12455 PF01042 Endoribonuclease L-PSP DS731_12460 PF00512 His Kinase A (phospho-acceptor) domain DS731_12460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_12460 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_12470 PF08362 YcdC-like protein, C-terminal region DS731_12470 PF00440 Bacterial regulatory proteins, tetR family DS731_12475 PF01799 [2Fe-2S] binding domain DS731_12475 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DS731_12475 PF00111 2Fe-2S iron-sulfur cluster binding domain DS731_12475 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DS731_12480 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DS731_12480 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DS731_12495 PF00576 HIUase/Transthyretin family DS731_12500 PF01979 Amidohydrolase family DS731_12515 PF00111 2Fe-2S iron-sulfur cluster binding domain DS731_12515 PF01799 [2Fe-2S] binding domain DS731_12520 PF00248 Aldo/keto reductase family DS731_12525 PF03466 LysR substrate binding domain DS731_12525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_12535 PF16338 Domain of unknown function (DUF4968) DS731_12535 PF01055 Glycosyl hydrolases family 31 DS731_12535 PF17137 Domain of unknown function (DUF5110) DS731_12540 PF08532 Beta-galactosidase trimerisation domain DS731_12540 PF08533 Beta-galactosidase C-terminal domain DS731_12540 PF02449 Beta-galactosidase DS731_12565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_12565 PF00529 HlyD membrane-fusion protein of T1SS DS731_12570 PF00873 AcrB/AcrD/AcrF family DS731_12575 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH DS731_12580 PF05016 ParE toxin of type II toxin-antitoxin system, parDE DS731_12615 PF01695 IstB-like ATP binding protein DS731_12620 PF13132 Domain of unknown function (DUF3950) DS731_12670 PF01047 MarR family DS731_12680 PF01168 Alanine racemase, N-terminal domain DS731_12680 PF14031 Putative serine dehydratase domain DS731_12685 PF07715 TonB-dependent Receptor Plug Domain DS731_12685 PF00593 TonB dependent receptor DS731_12690 PF01037 Lrp/AsnC ligand binding domain DS731_12695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DS731_12700 PF00512 His Kinase A (phospho-acceptor) domain DS731_12700 PF08446 PAS fold DS731_12700 PF00360 Phytochrome region DS731_12700 PF01590 GAF domain DS731_12700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_12710 PF03458 UPF0126 domain DS731_12720 PF09347 Domain of unknown function (DUF1989) DS731_12750 PF02028 BCCT, betaine/carnitine/choline family transporter DS731_12755 PF00873 AcrB/AcrD/AcrF family DS731_12780 PF07687 Peptidase dimerisation domain DS731_12780 PF01546 Peptidase family M20/M25/M40 DS731_12785 PF00171 Aldehyde dehydrogenase family DS731_12790 PF01266 FAD dependent oxidoreductase DS731_12795 PF05552 Conserved TM helix DS731_12795 PF00924 Mechanosensitive ion channel DS731_12800 PF07690 Major Facilitator Superfamily DS731_12810 PF01979 Amidohydrolase family DS731_12835 PF18644 Phage integrase SAM-like domain DS731_12835 PF00589 Phage integrase family DS731_12860 PF00005 ABC transporter DS731_12860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DS731_12865 PF12911 N-terminal TM domain of oligopeptide transport permease C DS731_12865 PF00528 Binding-protein-dependent transport system inner membrane component DS731_12870 PF00528 Binding-protein-dependent transport system inner membrane component DS731_12880 PF01266 FAD dependent oxidoreductase DS731_12895 PF00202 Aminotransferase class-III DS731_12900 PF00180 Isocitrate/isopropylmalate dehydrogenase DS731_12905 PF00171 Aldehyde dehydrogenase family DS731_12910 PF01161 Phosphatidylethanolamine-binding protein DS731_12935 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DS731_12935 PF00367 phosphotransferase system, EIIB DS731_12935 PF02378 Phosphotransferase system, EIIC DS731_12940 PF15887 Putative zinc-binding metallo-peptidase DS731_12940 PF10005 zinc-ribbon domain DS731_12950 PF14403 Circularly permuted ATP-grasp type 2 DS731_12960 PF01926 50S ribosome-binding GTPase DS731_12970 PF00593 TonB dependent receptor DS731_12970 PF07715 TonB-dependent Receptor Plug Domain DS731_12985 PF00593 TonB dependent receptor DS731_12985 PF07715 TonB-dependent Receptor Plug Domain DS731_12995 PF08281 Sigma-70, region 4 DS731_12995 PF04542 Sigma-70 region 2 DS731_13010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_13010 PF02895 Signal transducing histidine kinase, homodimeric domain DS731_13010 PF01584 CheW-like domain DS731_13010 PF01627 Hpt domain DS731_13010 PF07194 P2 response regulator binding domain DS731_13025 PF00005 ABC transporter DS731_13030 PF05981 CreA protein DS731_13040 PF01810 LysE type translocator DS731_13045 PF03960 ArsC family DS731_13050 PF01546 Peptidase family M20/M25/M40 DS731_13050 PF07687 Peptidase dimerisation domain DS731_13065 PF01906 Putative heavy-metal-binding DS731_13075 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DS731_13080 PF00563 EAL domain DS731_13080 PF00990 Diguanylate cyclase, GGDEF domain DS731_13080 PF03707 Bacterial signalling protein N terminal repeat DS731_13090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_13090 PF03466 LysR substrate binding domain DS731_13100 PF00343 Carbohydrate phosphorylase DS731_13105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DS731_13105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DS731_13105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DS731_13105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DS731_13110 PF17206 SeqA protein N-terminal domain DS731_13110 PF03925 SeqA protein C-terminal domain DS731_13115 PF17863 AAA lid domain DS731_13115 PF07726 ATPase family associated with various cellular activities (AAA) DS731_13125 PF11992 Domain of unknown function (DUF3488) DS731_13125 PF13559 Domain of unknown function (DUF4129) DS731_13125 PF01841 Transglutaminase-like superfamily DS731_13130 PF00009 Elongation factor Tu GTP binding domain DS731_13130 PF03144 Elongation factor Tu domain 2 DS731_13130 PF03764 Elongation factor G, domain IV DS731_13130 PF14492 Elongation Factor G, domain II DS731_13130 PF00679 Elongation factor G C-terminus DS731_13135 PF01728 FtsJ-like methyltransferase DS731_13135 PF18125 RlmM ferredoxin-like domain DS731_13140 PF04241 Protein of unknown function (DUF423) DS731_13150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_13150 PF03466 LysR substrate binding domain DS731_13170 PF11849 Domain of unknown function (DUF3369) DS731_13175 PF13847 Methyltransferase domain DS731_13175 PF17827 PrmC N-terminal domain DS731_13180 PF03462 PCRF domain DS731_13180 PF00472 RF-1 domain DS731_13185 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DS731_13185 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DS731_13185 PF01488 Shikimate / quinate 5-dehydrogenase DS731_13190 PF03550 Outer membrane lipoprotein LolB DS731_13195 PF08544 GHMP kinases C terminal DS731_13195 PF00288 GHMP kinases N terminal domain DS731_13205 PF14572 Phosphoribosyl synthetase-associated domain DS731_13205 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DS731_13220 PF14693 Ribosomal protein TL5, C-terminal domain DS731_13220 PF01386 Ribosomal L25p family DS731_13225 PF01195 Peptidyl-tRNA hydrolase DS731_13230 PF06071 Protein of unknown function (DUF933) DS731_13230 PF01926 50S ribosome-binding GTPase DS731_13235 PF02667 Short chain fatty acid transporter DS731_13260 PF01235 Sodium:alanine symporter family DS731_13270 PF00440 Bacterial regulatory proteins, tetR family DS731_13280 PF01494 FAD binding domain DS731_13285 PF01938 TRAM domain DS731_13285 PF04055 Radical SAM superfamily DS731_13285 PF00919 Uncharacterized protein family UPF0004 DS731_13290 PF02562 PhoH-like protein DS731_13295 PF02130 Uncharacterized protein family UPF0054 DS731_13300 PF03471 Transporter associated domain DS731_13300 PF00571 CBS domain DS731_13305 PF00795 Carbon-nitrogen hydrolase DS731_13310 PF01979 Amidohydrolase family DS731_13315 PF00011 Hsp20/alpha crystallin family DS731_13330 PF01272 Transcription elongation factor, GreA/GreB, C-term DS731_13330 PF03449 Transcription elongation factor, N-terminal DS731_13335 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DS731_13335 PF02142 MGS-like domain DS731_13335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DS731_13340 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DS731_13340 PF00117 Glutamine amidotransferase class-I DS731_13345 PF01113 Dihydrodipicolinate reductase, N-terminus DS731_13345 PF05173 Dihydrodipicolinate reductase, C-terminus DS731_13355 PF13193 AMP-binding enzyme C-terminal domain DS731_13355 PF00501 AMP-binding enzyme DS731_13355 PF16177 Acetyl-coenzyme A synthetase N-terminus DS731_13360 PF03707 Bacterial signalling protein N terminal repeat DS731_13360 PF00990 Diguanylate cyclase, GGDEF domain DS731_13360 PF00563 EAL domain DS731_13365 PF01322 Cytochrome C' DS731_13370 PF01810 LysE type translocator DS731_13415 PF00939 Sodium:sulfate symporter transmembrane region DS731_13420 PF00692 dUTPase DS731_13425 PF10609 NUBPL iron-transfer P-loop NTPase DS731_13430 PF08264 Anticodon-binding domain of tRNA DS731_13430 PF09334 tRNA synthetases class I (M) DS731_13430 PF01588 Putative tRNA binding domain DS731_13435 PF02112 cAMP phosphodiesterases class-II DS731_13440 PF08241 Methyltransferase domain DS731_13445 PF16123 Hydroxyacylglutathione hydrolase C-terminus DS731_13445 PF00753 Metallo-beta-lactamase superfamily DS731_13450 PF01464 Transglycosylase SLT domain DS731_13450 PF01476 LysM domain DS731_13465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DS731_13470 PF00149 Calcineurin-like phosphoesterase DS731_13480 PF00082 Subtilase family DS731_13500 PF00245 Alkaline phosphatase DS731_13505 PF00245 Alkaline phosphatase DS731_13515 PF07290 Protein of unknown function (DUF1449) DS731_13520 PF15975 Flotillin DS731_13520 PF01145 SPFH domain / Band 7 family DS731_13525 PF00672 HAMP domain DS731_13525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_13525 PF07730 Histidine kinase DS731_13530 PF00196 Bacterial regulatory proteins, luxR family DS731_13530 PF00072 Response regulator receiver domain DS731_13545 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) DS731_13550 PF00300 Histidine phosphatase superfamily (branch 1) DS731_13565 PF00156 Phosphoribosyl transferase domain DS731_13570 PF02674 Colicin V production protein DS731_13575 PF05036 Sporulation related domain DS731_13580 PF02875 Mur ligase family, glutamate ligase domain DS731_13580 PF08245 Mur ligase middle domain DS731_13585 PF17848 Acetyl-coA carboxylase zinc finger domain DS731_13585 PF01039 Carboxyl transferase domain DS731_13590 PF01416 tRNA pseudouridine synthase DS731_13600 PF02774 Semialdehyde dehydrogenase, dimerisation domain DS731_13600 PF01118 Semialdehyde dehydrogenase, NAD binding domain DS731_13605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DS731_13605 PF11890 Domain of unknown function (DUF3410) DS731_13605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DS731_13610 PF02801 Beta-ketoacyl synthase, C-terminal domain DS731_13610 PF00109 Beta-ketoacyl synthase, N-terminal domain DS731_13615 PF01266 FAD dependent oxidoreductase DS731_13615 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DS731_13645 PF04315 Elongation factor P hydroxylase DS731_13665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DS731_13665 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS731_13670 PF02909 Tetracyclin repressor-like, C-terminal domain DS731_13670 PF00440 Bacterial regulatory proteins, tetR family DS731_13675 PF05199 GMC oxidoreductase DS731_13675 PF00732 GMC oxidoreductase DS731_13685 PF06974 Protein of unknown function (DUF1298) DS731_13685 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain DS731_13690 PF00440 Bacterial regulatory proteins, tetR family DS731_13695 PF04286 Protein of unknown function (DUF445) DS731_13730 PF00392 Bacterial regulatory proteins, gntR family DS731_13730 PF07840 FadR C-terminal domain DS731_13735 PF06450 Bacterial Na+/H+ antiporter B (NhaB) DS731_13740 PF02600 Disulfide bond formation protein DsbB DS731_13745 PF13302 Acetyltransferase (GNAT) domain DS731_13750 PF03692 Putative zinc- or iron-chelating domain DS731_13755 PF01557 Fumarylacetoacetate (FAA) hydrolase family DS731_13765 PF05166 YcgL domain DS731_13770 PF00570 HRDC domain DS731_13770 PF01612 3'-5' exonuclease DS731_13775 PF00501 AMP-binding enzyme DS731_13775 PF13193 AMP-binding enzyme C-terminal domain DS731_13780 PF12697 Alpha/beta hydrolase family DS731_13795 PF00814 Glycoprotease family DS731_13800 PF13307 Helicase C-terminal domain DS731_13800 PF06733 DEAD_2 DS731_13805 PF00128 Alpha amylase, catalytic domain DS731_13820 PF00672 HAMP domain DS731_13820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_13820 PF17200 Single Cache domain 2 DS731_13835 PF01022 Bacterial regulatory protein, arsR family DS731_13845 PF01758 Sodium Bile acid symporter family DS731_13860 PF08029 HisG, C-terminal domain DS731_13860 PF01634 ATP phosphoribosyltransferase DS731_13865 PF00815 Histidinol dehydrogenase DS731_13870 PF00155 Aminotransferase class I and II DS731_13875 PF00475 Imidazoleglycerol-phosphate dehydratase DS731_13880 PF00117 Glutamine amidotransferase class-I DS731_13885 PF00977 Histidine biosynthesis protein DS731_13890 PF00977 Histidine biosynthesis protein DS731_13895 PF01502 Phosphoribosyl-AMP cyclohydrolase DS731_13895 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DS731_13905 PF10502 Signal peptidase, peptidase S26 DS731_13910 PF00011 Hsp20/alpha crystallin family DS731_13915 PF00011 Hsp20/alpha crystallin family DS731_13920 PF03466 LysR substrate binding domain DS731_13920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_13925 PF05368 NmrA-like family DS731_13930 PF14031 Putative serine dehydratase domain DS731_13930 PF01168 Alanine racemase, N-terminal domain DS731_13940 PF05191 Adenylate kinase, active site lid DS731_13945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_13945 PF00183 Hsp90 protein DS731_13950 PF02132 RecR protein DS731_13950 PF13662 Toprim domain DS731_13965 PF02575 YbaB/EbfC DNA-binding family DS731_13970 PF12169 DNA polymerase III subunits gamma and tau domain III DS731_13970 PF12170 DNA polymerase III tau subunit V interacting with alpha DS731_13975 PF00156 Phosphoribosyl transferase domain DS731_13985 PF05114 Protein of unknown function (DUF692) DS731_13995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_14030 PF01066 CDP-alcohol phosphatidyltransferase DS731_14050 PF07724 AAA domain (Cdc48 subfamily) DS731_14050 PF00004 ATPase family associated with various cellular activities (AAA) DS731_14050 PF02861 Clp amino terminal domain, pathogenicity island component DS731_14050 PF10431 C-terminal, D2-small domain, of ClpB protein DS731_14050 PF17871 AAA lid domain DS731_14060 PF01479 S4 domain DS731_14060 PF00849 RNA pseudouridylate synthase DS731_14065 PF13525 Outer membrane lipoprotein DS731_14070 PF12973 ChrR Cupin-like domain DS731_14075 PF04542 Sigma-70 region 2 DS731_14075 PF04545 Sigma-70, region 4 DS731_14090 PF00106 short chain dehydrogenase DS731_14110 PF13677 Membrane MotB of proton-channel complex MotA/MotB DS731_14110 PF00691 OmpA family DS731_14115 PF01618 MotA/TolQ/ExbB proton channel family DS731_14120 PF02609 Exonuclease VII small subunit DS731_14125 PF00348 Polyprenyl synthetase DS731_14130 PF02779 Transketolase, pyrimidine binding domain DS731_14130 PF02780 Transketolase, C-terminal domain DS731_14130 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DS731_14135 PF04608 Phosphatidylglycerophosphatase A DS731_14140 PF00586 AIR synthase related protein, N-terminal domain DS731_14140 PF02769 AIR synthase related protein, C-terminal domain DS731_14145 PF01029 NusB family DS731_14150 PF00885 6,7-dimethyl-8-ribityllumazine synthase DS731_14155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DS731_14155 PF00925 GTP cyclohydrolase II DS731_14160 PF00677 Lumazine binding domain DS731_14165 PF01872 RibD C-terminal domain DS731_14165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DS731_14170 PF03477 ATP cone domain DS731_14175 PF00464 Serine hydroxymethyltransferase DS731_14180 PF00132 Bacterial transferase hexapeptide (six repeats) DS731_14180 PF14602 Hexapeptide repeat of succinyl-transferase DS731_14180 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DS731_14185 PF00005 ABC transporter DS731_14185 PF12848 ABC transporter DS731_14190 PF07238 PilZ domain DS731_14195 PF18073 Rubredoxin metal binding domain DS731_14205 PF18429 Domain of unknown function (DUF5609) DS731_14215 PF01026 TatD related DNase DS731_14220 PF01243 Pyridoxamine 5'-phosphate oxidase DS731_14220 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DS731_14225 PF01926 50S ribosome-binding GTPase DS731_14225 PF07650 KH domain DS731_14230 PF14622 Ribonuclease-III-like DS731_14230 PF00035 Double-stranded RNA binding motif DS731_14235 PF10502 Signal peptidase, peptidase S26 DS731_14240 PF06421 GTP-binding protein LepA C-terminus DS731_14240 PF00009 Elongation factor Tu GTP binding domain DS731_14240 PF03144 Elongation factor Tu domain 2 DS731_14240 PF00679 Elongation factor G C-terminus DS731_14250 PF17188 MucB/RseB C-terminal domain DS731_14250 PF03888 MucB/RseB N-terminal domain DS731_14260 PF04542 Sigma-70 region 2 DS731_14260 PF08281 Sigma-70, region 4 DS731_14265 PF00890 FAD binding domain DS731_14265 PF02910 Fumarate reductase flavoprotein C-term DS731_14280 PF03937 Flavinator of succinate dehydrogenase DS731_14290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS731_14295 PF00543 Nitrogen regulatory protein P-II DS731_14330 PF00114 Pilin (bacterial filament) DS731_14330 PF07963 Prokaryotic N-terminal methylation motif DS731_14335 PF05567 Neisseria PilC beta-propeller domain DS731_14355 PF02401 LytB protein DS731_14360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS731_14365 PF01252 Signal peptidase (SPase) II DS731_14370 PF00133 tRNA synthetases class I (I, L, M and V) DS731_14370 PF08264 Anticodon-binding domain of tRNA DS731_14370 PF06827 Zinc finger found in FPG and IleRS DS731_14375 PF01687 Riboflavin kinase DS731_14375 PF06574 FAD synthetase DS731_14380 PF03023 Lipid II flippase MurJ DS731_14385 PF01649 Ribosomal protein S20 DS731_14415 PF03965 Penicillinase repressor DS731_14420 PF03544 Gram-negative bacterial TonB protein C-terminal DS731_14425 PF07690 Major Facilitator Superfamily DS731_14430 PF00529 HlyD membrane-fusion protein of T1SS DS731_14430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_14450 PF13145 PPIC-type PPIASE domain DS731_14455 PF00216 Bacterial DNA-binding protein DS731_14460 PF05362 Lon protease (S16) C-terminal proteolytic domain DS731_14460 PF00004 ATPase family associated with various cellular activities (AAA) DS731_14460 PF02190 ATP-dependent protease La (LON) substrate-binding domain DS731_14465 PF07963 Prokaryotic N-terminal methylation motif DS731_14465 PF00114 Pilin (bacterial filament) DS731_14470 PF10431 C-terminal, D2-small domain, of ClpB protein DS731_14470 PF06689 ClpX C4-type zinc finger DS731_14470 PF07724 AAA domain (Cdc48 subfamily) DS731_14475 PF00574 Clp protease DS731_14480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS731_14480 PF05697 Bacterial trigger factor protein (TF) DS731_14480 PF05698 Bacterial trigger factor protein (TF) C-terminus DS731_14505 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DS731_14505 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DS731_14530 PF00005 ABC transporter DS731_14535 PF18389 TrmO C-terminal domain DS731_14535 PF01980 tRNA-methyltransferase O DS731_14540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DS731_14540 PF03129 Anticodon binding domain DS731_14550 PF02253 Phospholipase A1 DS731_14555 PF00850 Histone deacetylase domain DS731_14560 PF00672 HAMP domain DS731_14560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_14565 PF00107 Zinc-binding dehydrogenase DS731_14565 PF08240 Alcohol dehydrogenase GroES-like domain DS731_14570 PF00141 Peroxidase DS731_14575 PF08240 Alcohol dehydrogenase GroES-like domain DS731_14575 PF00107 Zinc-binding dehydrogenase DS731_14585 PF02540 NAD synthase DS731_14585 PF00117 Glutamine amidotransferase class-I DS731_14585 PF00958 GMP synthase C terminal domain DS731_14590 PF00478 IMP dehydrogenase / GMP reductase domain DS731_14590 PF00571 CBS domain DS731_14595 PF13742 OB-fold nucleic acid binding domain DS731_14595 PF02601 Exonuclease VII, large subunit DS731_14605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DS731_14605 PF01926 50S ribosome-binding GTPase DS731_14610 PF13360 PQQ-like domain DS731_14615 PF09976 Tetratricopeptide repeat-like domain DS731_14620 PF13393 Histidyl-tRNA synthetase DS731_14620 PF03129 Anticodon binding domain DS731_14625 PF04551 GcpE protein DS731_14630 PF13464 Domain of unknown function (DUF4115) DS731_14640 PF04055 Radical SAM superfamily DS731_14650 PF01432 Peptidase family M3 DS731_14655 PF00334 Nucleoside diphosphate kinase DS731_14660 PF02657 Fe-S metabolism associated domain DS731_14665 PF01883 Iron-sulfur cluster assembly protein DS731_14670 PF01521 Iron-sulphur cluster biosynthesis DS731_14675 PF00266 Aminotransferase class-V DS731_14680 PF01458 Uncharacterized protein family (UPF0051) DS731_14685 PF00005 ABC transporter DS731_14690 PF01458 Uncharacterized protein family (UPF0051) DS731_14695 PF00266 Aminotransferase class-V DS731_14700 PF02082 Transcriptional regulator DS731_14705 PF00132 Bacterial transferase hexapeptide (six repeats) DS731_14710 PF00588 SpoU rRNA Methylase family DS731_14715 PF00459 Inositol monophosphatase family DS731_14720 PF02355 Protein export membrane protein DS731_14720 PF07549 SecD/SecF GG Motif DS731_14725 PF07549 SecD/SecF GG Motif DS731_14725 PF13721 SecD export protein N-terminal TM region DS731_14725 PF02355 Protein export membrane protein DS731_14730 PF02699 Preprotein translocase subunit DS731_14735 PF01702 Queuine tRNA-ribosyltransferase DS731_14740 PF02547 Queuosine biosynthesis protein DS731_14755 PF04012 PspA/IM30 family DS731_14760 PF07885 Ion channel DS731_14775 PF06693 Protein of unknown function (DUF1190) DS731_14780 PF03738 Glutathionylspermidine synthase preATP-grasp DS731_14795 PF00245 Alkaline phosphatase DS731_14805 PF00463 Isocitrate lyase family DS731_14810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_14810 PF03466 LysR substrate binding domain DS731_14815 PF01274 Malate synthase DS731_14825 PF01370 NAD dependent epimerase/dehydratase family DS731_14830 PF17820 PDZ domain DS731_14830 PF13180 PDZ domain DS731_14850 PF00132 Bacterial transferase hexapeptide (six repeats) DS731_14865 PF01522 Polysaccharide deacetylase DS731_14870 PF00534 Glycosyl transferases group 1 DS731_14870 PF17101 Stealth protein CR1, conserved region 1 DS731_14870 PF11380 Stealth protein CR2, conserved region 2 DS731_14870 PF17102 Stealth protein CR3, conserved region 3 DS731_14870 PF17103 Stealth protein CR4, conserved region 4 DS731_14875 PF00534 Glycosyl transferases group 1 DS731_14875 PF13439 Glycosyltransferase Family 4 DS731_14890 PF02397 Bacterial sugar transferase DS731_14905 PF13614 AAA domain DS731_14915 PF13401 AAA domain DS731_14915 PF01471 Putative peptidoglycan binding domain DS731_14920 PF00294 pfkB family carbohydrate kinase DS731_14920 PF01467 Cytidylyltransferase-like DS731_14925 PF01541 GIY-YIG catalytic domain DS731_14935 PF08335 GlnD PII-uridylyltransferase DS731_14935 PF03710 Glutamate-ammonia ligase adenylyltransferase DS731_14945 PF03279 Bacterial lipid A biosynthesis acyltransferase DS731_14975 PF09317 Domain of unknown function (DUF1974) DS731_14975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DS731_14975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DS731_14975 PF02770 Acyl-CoA dehydrogenase, middle domain DS731_14980 PF03707 Bacterial signalling protein N terminal repeat DS731_14980 PF13188 PAS domain DS731_14980 PF00990 Diguanylate cyclase, GGDEF domain DS731_14980 PF00563 EAL domain DS731_14985 PF00265 Thymidine kinase DS731_14990 PF00144 Beta-lactamase DS731_15000 PF00356 Bacterial regulatory proteins, lacI family DS731_15005 PF00464 Serine hydroxymethyltransferase DS731_15010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_15010 PF03466 LysR substrate binding domain DS731_15015 PF04542 Sigma-70 region 2 DS731_15015 PF08281 Sigma-70, region 4 DS731_15025 PF01546 Peptidase family M20/M25/M40 DS731_15030 PF01546 Peptidase family M20/M25/M40 DS731_15035 PF07715 TonB-dependent Receptor Plug Domain DS731_15035 PF00593 TonB dependent receptor DS731_15050 PF01156 Inosine-uridine preferring nucleoside hydrolase DS731_15055 PF01546 Peptidase family M20/M25/M40 DS731_15055 PF07687 Peptidase dimerisation domain DS731_15070 PF03776 Septum formation topological specificity factor MinE DS731_15075 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DS731_15080 PF03775 Septum formation inhibitor MinC, C-terminal domain DS731_15080 PF05209 Septum formation inhibitor MinC, N-terminal domain DS731_15100 PF08042 PqqA family DS731_15105 PF12706 Beta-lactamase superfamily domain DS731_15110 PF03070 TENA/THI-4/PQQC family DS731_15115 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DS731_15120 PF04055 Radical SAM superfamily DS731_15120 PF13186 Iron-sulfur cluster-binding domain DS731_15130 PF07690 Major Facilitator Superfamily DS731_15135 PF02254 TrkA-N domain DS731_15135 PF00999 Sodium/hydrogen exchanger family DS731_15145 PF07715 TonB-dependent Receptor Plug Domain DS731_15145 PF00593 TonB dependent receptor DS731_15150 PF02659 Putative manganese efflux pump DS731_15160 PF04264 YceI-like domain DS731_15170 PF05987 Bacterial protein of unknown function (DUF898) DS731_15195 PF08240 Alcohol dehydrogenase GroES-like domain DS731_15195 PF00107 Zinc-binding dehydrogenase DS731_15200 PF16925 Tetracyclin repressor-like, C-terminal domain DS731_15200 PF00440 Bacterial regulatory proteins, tetR family DS731_15205 PF00892 EamA-like transporter family DS731_15220 PF00924 Mechanosensitive ion channel DS731_15225 PF00924 Mechanosensitive ion channel DS731_15230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_15230 PF00512 His Kinase A (phospho-acceptor) domain DS731_15230 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_15235 PF01594 AI-2E family transporter DS731_15240 PF00271 Helicase conserved C-terminal domain DS731_15240 PF00270 DEAD/DEAH box helicase DS731_15250 PF00580 UvrD/REP helicase N-terminal domain DS731_15250 PF13361 UvrD-like helicase C-terminal domain DS731_15250 PF12462 DNA helicase IV / RNA helicase N terminal DS731_15255 PF00753 Metallo-beta-lactamase superfamily DS731_15305 PF01597 Glycine cleavage H-protein DS731_15310 PF08669 Glycine cleavage T-protein C-terminal barrel domain DS731_15310 PF01571 Aminomethyltransferase folate-binding domain DS731_15315 PF03466 LysR substrate binding domain DS731_15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_15330 PF01494 FAD binding domain DS731_15335 PF01494 FAD binding domain DS731_15340 PF05195 Aminopeptidase P, N-terminal domain DS731_15340 PF00557 Metallopeptidase family M24 DS731_15345 PF03695 Uncharacterised protein family (UPF0149) DS731_15355 PF00294 pfkB family carbohydrate kinase DS731_15360 PF01156 Inosine-uridine preferring nucleoside hydrolase DS731_15370 PF01812 5-formyltetrahydrofolate cyclo-ligase family DS731_15375 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DS731_15380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DS731_15380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DS731_15380 PF01842 ACT domain DS731_15400 PF00665 Integrase core domain DS731_15400 PF13276 HTH-like domain DS731_15400 PF13333 Integrase core domain DS731_15420 PF06945 Protein of unknown function (DUF1289) DS731_15430 PF00873 AcrB/AcrD/AcrF family DS731_15435 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_15440 PF03466 LysR substrate binding domain DS731_15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_15445 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS731_15445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DS731_15450 PF02817 e3 binding domain DS731_15450 PF00364 Biotin-requiring enzyme DS731_15450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DS731_15455 PF17831 Pyruvate dehydrogenase E1 component middle domain DS731_15455 PF00456 Transketolase, thiamine diphosphate binding domain DS731_15460 PF07729 FCD domain DS731_15460 PF00392 Bacterial regulatory proteins, gntR family DS731_15470 PF01510 N-acetylmuramoyl-L-alanine amidase DS731_15480 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DS731_15480 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DS731_15485 PF00114 Pilin (bacterial filament) DS731_15485 PF07963 Prokaryotic N-terminal methylation motif DS731_15490 PF00482 Type II secretion system (T2SS), protein F DS731_15495 PF01478 Type IV leader peptidase family DS731_15495 PF06750 Bacterial Peptidase A24 N-terminal domain DS731_15500 PF01121 Dephospho-CoA kinase DS731_15505 PF07072 Cell division protein DS731_15515 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family DS731_15520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_15520 PF00672 HAMP domain DS731_15520 PF12729 Four helix bundle sensory module for signal transduction DS731_15530 PF13614 AAA domain DS731_15540 PF07194 P2 response regulator binding domain DS731_15540 PF01627 Hpt domain DS731_15540 PF02895 Signal transducing histidine kinase, homodimeric domain DS731_15540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_15540 PF01584 CheW-like domain DS731_15545 PF00072 Response regulator receiver domain DS731_15550 PF03705 CheR methyltransferase, all-alpha domain DS731_15550 PF01739 CheR methyltransferase, SAM binding domain DS731_15560 PF00072 Response regulator receiver domain DS731_15560 PF01339 CheB methylesterase DS731_15565 PF01584 CheW-like domain DS731_15570 PF00672 HAMP domain DS731_15570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_15570 PF17202 Single cache domain 3 DS731_15575 PF00293 NUDIX domain DS731_15580 PF02810 SEC-C motif DS731_15580 PF07516 SecA Wing and Scaffold domain DS731_15580 PF01043 SecA preprotein cross-linking domain DS731_15580 PF07517 SecA DEAD-like domain DS731_15585 PF10145 Phage-related minor tail protein DS731_15585 PF01551 Peptidase family M23 DS731_15585 PF01464 Transglycosylase SLT domain DS731_15590 PF00990 Diguanylate cyclase, GGDEF domain DS731_15595 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DS731_15600 PF00091 Tubulin/FtsZ family, GTPase domain DS731_15600 PF12327 FtsZ family, C-terminal domain DS731_15605 PF02491 SHS2 domain inserted in FTSA DS731_15610 PF03799 Cell division protein FtsQ DS731_15610 PF08478 POTRA domain, FtsQ-type DS731_15615 PF01820 D-ala D-ala ligase N-terminus DS731_15615 PF07478 D-ala D-ala ligase C-terminus DS731_15620 PF02875 Mur ligase family, glutamate ligase domain DS731_15620 PF01225 Mur ligase family, catalytic domain DS731_15620 PF08245 Mur ligase middle domain DS731_15625 PF03033 Glycosyltransferase family 28 N-terminal domain DS731_15625 PF04101 Glycosyltransferase family 28 C-terminal domain DS731_15630 PF01098 Cell cycle protein DS731_15635 PF08245 Mur ligase middle domain DS731_15635 PF02875 Mur ligase family, glutamate ligase domain DS731_15640 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DS731_15640 PF00953 Glycosyl transferase family 4 DS731_15645 PF08245 Mur ligase middle domain DS731_15645 PF02875 Mur ligase family, glutamate ligase domain DS731_15645 PF01225 Mur ligase family, catalytic domain DS731_15650 PF02875 Mur ligase family, glutamate ligase domain DS731_15650 PF08245 Mur ligase middle domain DS731_15650 PF01225 Mur ligase family, catalytic domain DS731_15655 PF03717 Penicillin-binding Protein dimerisation domain DS731_15655 PF00905 Penicillin binding protein transpeptidase domain DS731_15660 PF04999 Cell division protein FtsL DS731_15665 PF01795 MraW methylase family DS731_15670 PF02381 MraZ protein, putative antitoxin-like DS731_15675 PF01095 Pectinesterase DS731_15690 PF00005 ABC transporter DS731_15695 PF03692 Putative zinc- or iron-chelating domain DS731_15710 PF01244 Membrane dipeptidase (Peptidase family M19) DS731_15715 PF02080 TrkA-C domain DS731_15715 PF03471 Transporter associated domain DS731_15715 PF00999 Sodium/hydrogen exchanger family DS731_15720 PF02355 Protein export membrane protein DS731_15720 PF07549 SecD/SecF GG Motif DS731_15730 PF13474 SnoaL-like domain DS731_15750 PF00990 Diguanylate cyclase, GGDEF domain DS731_15750 PF05230 MASE2 domain DS731_15755 PF00072 Response regulator receiver domain DS731_15755 PF02954 Bacterial regulatory protein, Fis family DS731_15755 PF00158 Sigma-54 interaction domain DS731_15760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_15760 PF00072 Response regulator receiver domain DS731_15760 PF01627 Hpt domain DS731_15760 PF18415 Histidine kinase receptor ArcB trans-membrane domain DS731_15760 PF00512 His Kinase A (phospho-acceptor) domain DS731_15760 PF00989 PAS fold DS731_15765 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DS731_15765 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DS731_15780 PF00924 Mechanosensitive ion channel DS731_15780 PF05552 Conserved TM helix DS731_15790 PF04452 RNA methyltransferase DS731_15800 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DS731_15800 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DS731_15810 PF03652 Holliday junction resolvase DS731_15820 PF00437 Type II/IV secretion system protein DS731_15825 PF00437 Type II/IV secretion system protein DS731_15830 PF01168 Alanine racemase, N-terminal domain DS731_15835 PF14748 Pyrroline-5-carboxylate reductase dimerisation DS731_15835 PF03807 NADP oxidoreductase coenzyme F420-dependent DS731_15840 PF02325 YGGT family DS731_15855 PF16884 N-terminal domain of oxidoreductase DS731_15855 PF00107 Zinc-binding dehydrogenase DS731_15875 PF00155 Aminotransferase class I and II DS731_15880 PF03883 Peroxide stress protein YaaA DS731_15885 PF00923 Transaldolase/Fructose-6-phosphate aldolase DS731_15890 PF00342 Phosphoglucose isomerase DS731_15900 PF03167 Uracil DNA glycosylase superfamily DS731_15905 PF14821 Threonine synthase N terminus DS731_15905 PF00291 Pyridoxal-phosphate dependent enzyme DS731_15910 PF00288 GHMP kinases N terminal domain DS731_15910 PF08544 GHMP kinases C terminal DS731_15915 PF03447 Homoserine dehydrogenase, NAD binding domain DS731_15915 PF00742 Homoserine dehydrogenase DS731_15915 PF13840 ACT domain DS731_15915 PF01842 ACT domain DS731_15915 PF00696 Amino acid kinase family DS731_15920 PF02806 Alpha amylase, C-terminal all-beta domain DS731_15920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DS731_15920 PF00128 Alpha amylase, catalytic domain DS731_15925 PF07715 TonB-dependent Receptor Plug Domain DS731_15925 PF00593 TonB dependent receptor DS731_15935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS731_15950 PF01804 Penicillin amidase DS731_15955 PF00106 short chain dehydrogenase DS731_15960 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DS731_15965 PF00072 Response regulator receiver domain DS731_15965 PF00486 Transcriptional regulatory protein, C terminal DS731_15970 PF00672 HAMP domain DS731_15970 PF00512 His Kinase A (phospho-acceptor) domain DS731_15970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_15980 PF13360 PQQ-like domain DS731_16010 PF16653 Saccharopine dehydrogenase C-terminal domain DS731_16010 PF03435 Saccharopine dehydrogenase NADP binding domain DS731_16015 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DS731_16025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DS731_16030 PF04348 LppC putative lipoprotein DS731_16035 PF02021 Uncharacterised protein family UPF0102 DS731_16040 PF13580 SIS domain DS731_16045 PF04972 BON domain DS731_16055 PF09339 IclR helix-turn-helix domain DS731_16055 PF01614 Bacterial transcriptional regulator DS731_16060 PF07690 Major Facilitator Superfamily DS731_16080 PF00285 Citrate synthase, C-terminal domain DS731_16085 PF00330 Aconitase family (aconitate hydratase) DS731_16085 PF00694 Aconitase C-terminal domain DS731_16090 PF04303 PrpF protein DS731_16100 PF11838 ERAP1-like C-terminal domain DS731_16100 PF01433 Peptidase family M1 domain DS731_16115 PF00989 PAS fold DS731_16115 PF01627 Hpt domain DS731_16115 PF18415 Histidine kinase receptor ArcB trans-membrane domain DS731_16115 PF00512 His Kinase A (phospho-acceptor) domain DS731_16115 PF00072 Response regulator receiver domain DS731_16115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_16120 PF01493 GXGXG motif DS731_16120 PF00310 Glutamine amidotransferases class-II DS731_16120 PF01645 Conserved region in glutamate synthase DS731_16120 PF04898 Glutamate synthase central domain DS731_16125 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS731_16125 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DS731_16135 PF00331 Glycosyl hydrolase family 10 DS731_16135 PF00553 Cellulose binding domain DS731_16135 PF03422 Carbohydrate binding module (family 6) DS731_16150 PF01048 Phosphorylase superfamily DS731_16155 PF03186 CobD/Cbib protein DS731_16175 PF00579 tRNA synthetases class I (W and Y) DS731_16180 PF01464 Transglycosylase SLT domain DS731_16180 PF10145 Phage-related minor tail protein DS731_16180 PF01551 Peptidase family M23 DS731_16185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DS731_16190 PF00043 Glutathione S-transferase, C-terminal domain DS731_16190 PF13417 Glutathione S-transferase, N-terminal domain DS731_16195 PF01521 Iron-sulphur cluster biosynthesis DS731_16200 PF07690 Major Facilitator Superfamily DS731_16205 PF03793 PASTA domain DS731_16205 PF00069 Protein kinase domain DS731_16235 PF01566 Natural resistance-associated macrophage protein DS731_16240 PF00155 Aminotransferase class I and II DS731_16245 PF02954 Bacterial regulatory protein, Fis family DS731_16245 PF00158 Sigma-54 interaction domain DS731_16245 PF00072 Response regulator receiver domain DS731_16255 PF00120 Glutamine synthetase, catalytic domain DS731_16255 PF03951 Glutamine synthetase, beta-Grasp domain DS731_16265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_16265 PF00512 His Kinase A (phospho-acceptor) domain DS731_16265 PF00989 PAS fold DS731_16270 PF00072 Response regulator receiver domain DS731_16270 PF02954 Bacterial regulatory protein, Fis family DS731_16270 PF00158 Sigma-54 interaction domain DS731_16275 PF00072 Response regulator receiver domain DS731_16280 PF01553 Acyltransferase DS731_16285 PF06877 Regulator of ribonuclease activity B DS731_16305 PF00672 HAMP domain DS731_16305 PF00512 His Kinase A (phospho-acceptor) domain DS731_16305 PF01627 Hpt domain DS731_16305 PF00072 Response regulator receiver domain DS731_16305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_16305 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DS731_16310 PF10458 Valyl tRNA synthetase tRNA binding arm DS731_16310 PF00133 tRNA synthetases class I (I, L, M and V) DS731_16310 PF08264 Anticodon-binding domain of tRNA DS731_16315 PF04364 DNA polymerase III chi subunit, HolC DS731_16320 PF02789 Cytosol aminopeptidase family, N-terminal domain DS731_16320 PF00883 Cytosol aminopeptidase family, catalytic domain DS731_16325 PF03739 Lipopolysaccharide export system permease LptF/LptG DS731_16330 PF03739 Lipopolysaccharide export system permease LptF/LptG DS731_16350 PF00005 ABC transporter DS731_16420 PF02659 Putative manganese efflux pump DS731_16430 PF16916 Dimerisation domain of Zinc Transporter DS731_16430 PF01545 Cation efflux family DS731_16435 PF00873 AcrB/AcrD/AcrF family DS731_16440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_16440 PF00529 HlyD membrane-fusion protein of T1SS DS731_16475 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DS731_16475 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DS731_16475 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal DS731_16500 PF13382 Adenine deaminase C-terminal domain DS731_16500 PF01979 Amidohydrolase family DS731_16510 PF04820 Tryptophan halogenase DS731_16520 PF07729 FCD domain DS731_16520 PF00392 Bacterial regulatory proteins, gntR family DS731_16530 PF16355 Domain of unknown function (DUF4982) DS731_16530 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DS731_16530 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DS731_16530 PF00703 Glycosyl hydrolases family 2 DS731_16530 PF02837 Glycosyl hydrolases family 2, sugar binding domain DS731_16555 PF04820 Tryptophan halogenase DS731_16560 PF00331 Glycosyl hydrolase family 10 DS731_16565 PF14310 Fibronectin type III-like domain DS731_16565 PF00933 Glycosyl hydrolase family 3 N terminal domain DS731_16565 PF01915 Glycosyl hydrolase family 3 C-terminal domain DS731_16565 PF07691 PA14 domain DS731_16570 PF13378 Enolase C-terminal domain-like DS731_16570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DS731_16575 PF07477 Glycosyl hydrolase family 67 C-terminus DS731_16575 PF03648 Glycosyl hydrolase family 67 N-terminus DS731_16575 PF07488 Glycosyl hydrolase family 67 middle domain DS731_16580 PF00083 Sugar (and other) transporter DS731_16585 PF04616 Glycosyl hydrolases family 43 DS731_16590 PF09308 LuxQ, periplasmic DS731_16590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_16590 PF00512 His Kinase A (phospho-acceptor) domain DS731_16590 PF00072 Response regulator receiver domain DS731_16600 PF11953 Domain of unknown function (DUF3470) DS731_16600 PF00037 4Fe-4S binding domain DS731_16605 PF01728 FtsJ-like methyltransferase DS731_16610 PF08032 RNA 2'-O ribose methyltransferase substrate binding DS731_16610 PF00588 SpoU rRNA Methylase family DS731_16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_16630 PF03466 LysR substrate binding domain DS731_16645 PF00529 HlyD membrane-fusion protein of T1SS DS731_16645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_16650 PF00873 AcrB/AcrD/AcrF family DS731_16655 PF02321 Outer membrane efflux protein DS731_16685 PF00550 Phosphopantetheine attachment site DS731_16705 PF00109 Beta-ketoacyl synthase, N-terminal domain DS731_16705 PF02801 Beta-ketoacyl synthase, C-terminal domain DS731_16725 PF07977 FabA-like domain DS731_16745 PF00109 Beta-ketoacyl synthase, N-terminal domain DS731_16745 PF02801 Beta-ketoacyl synthase, C-terminal domain DS731_16750 PF00550 Phosphopantetheine attachment site DS731_16755 PF01648 4'-phosphopantetheinyl transferase superfamily DS731_16765 PF03707 Bacterial signalling protein N terminal repeat DS731_16765 PF00990 Diguanylate cyclase, GGDEF domain DS731_16765 PF00563 EAL domain DS731_16795 PF00356 Bacterial regulatory proteins, lacI family DS731_16810 PF00732 GMC oxidoreductase DS731_16810 PF05199 GMC oxidoreductase DS731_16820 PF13460 NAD(P)H-binding DS731_16825 PF00561 alpha/beta hydrolase fold DS731_16830 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DS731_16830 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DS731_16845 PF00593 TonB dependent receptor DS731_16850 PF00356 Bacterial regulatory proteins, lacI family DS731_16860 PF12794 Mechanosensitive ion channel inner membrane domain 1 DS731_16860 PF12795 Mechanosensitive ion channel porin domain DS731_16860 PF00924 Mechanosensitive ion channel DS731_16865 PF00501 AMP-binding enzyme DS731_16865 PF13193 AMP-binding enzyme C-terminal domain DS731_16870 PF00378 Enoyl-CoA hydratase/isomerase DS731_16875 PF00171 Aldehyde dehydrogenase family DS731_16880 PF07690 Major Facilitator Superfamily DS731_16930 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DS731_16930 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DS731_16945 PF00593 TonB dependent receptor DS731_16945 PF07715 TonB-dependent Receptor Plug Domain DS731_16960 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DS731_16965 PF03480 Bacterial extracellular solute-binding protein, family 7 DS731_16970 PF02515 CoA-transferase family III DS731_16975 PF02515 CoA-transferase family III DS731_16980 PF02515 CoA-transferase family III DS731_16985 PF02515 CoA-transferase family III DS731_16995 PF00135 Carboxylesterase family DS731_17005 PF07715 TonB-dependent Receptor Plug Domain DS731_17005 PF00593 TonB dependent receptor DS731_17010 PF08501 Shikimate dehydrogenase substrate binding domain DS731_17010 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DS731_17020 PF01220 Dehydroquinase class II DS731_17025 PF07690 Major Facilitator Superfamily DS731_17030 PF03466 LysR substrate binding domain DS731_17030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_17035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DS731_17040 PF01048 Phosphorylase superfamily DS731_17045 PF00294 pfkB family carbohydrate kinase DS731_17050 PF04966 Carbohydrate-selective porin, OprB family DS731_17055 PF00480 ROK family DS731_17060 PF07690 Major Facilitator Superfamily DS731_17075 PF08502 LeuA allosteric (dimerisation) domain DS731_17075 PF00682 HMGL-like DS731_17080 PF01037 Lrp/AsnC ligand binding domain DS731_17090 PF00356 Bacterial regulatory proteins, lacI family DS731_17100 PF01204 Trehalase DS731_17115 PF02321 Outer membrane efflux protein DS731_17130 PF00005 ABC transporter DS731_17135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_17145 PF09330 D-lactate dehydrogenase, membrane binding DS731_17145 PF01565 FAD binding domain DS731_17150 PF00270 DEAD/DEAH box helicase DS731_17150 PF00271 Helicase conserved C-terminal domain DS731_17155 PF00313 'Cold-shock' DNA-binding domain DS731_17160 PF03707 Bacterial signalling protein N terminal repeat DS731_17160 PF00563 EAL domain DS731_17160 PF00990 Diguanylate cyclase, GGDEF domain DS731_17165 PF00990 Diguanylate cyclase, GGDEF domain DS731_17165 PF03707 Bacterial signalling protein N terminal repeat DS731_17165 PF00563 EAL domain DS731_17165 PF13188 PAS domain DS731_17180 PF00291 Pyridoxal-phosphate dependent enzyme DS731_17200 PF01118 Semialdehyde dehydrogenase, NAD binding domain DS731_17200 PF02774 Semialdehyde dehydrogenase, dimerisation domain DS731_17205 PF03553 Na+/H+ antiporter family DS731_17215 PF06481 COX Aromatic Rich Motif DS731_17215 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DS731_17220 PF00115 Cytochrome C and Quinol oxidase polypeptide I DS731_17225 PF00510 Cytochrome c oxidase subunit III DS731_17230 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DS731_17240 PF18494 Pullulanase Ins domain DS731_17240 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DS731_17240 PF17967 Pullulanase N2 domain DS731_17240 PF11852 Domain of unknown function (DUF3372) DS731_17240 PF03714 Bacterial pullanase-associated domain DS731_17250 PF03466 LysR substrate binding domain DS731_17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_17255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DS731_17260 PF07859 alpha/beta hydrolase fold DS731_17260 PF13472 GDSL-like Lipase/Acylhydrolase family DS731_17265 PF07969 Amidohydrolase family DS731_17280 PF03372 Endonuclease/Exonuclease/phosphatase family DS731_17285 PF03466 LysR substrate binding domain DS731_17285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_17300 PF01925 Sulfite exporter TauE/SafE DS731_17310 PF17200 Single Cache domain 2 DS731_17310 PF00672 HAMP domain DS731_17310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_17315 PF00072 Response regulator receiver domain DS731_17320 PF01584 CheW-like domain DS731_17320 PF09078 CheY binding DS731_17320 PF01627 Hpt domain DS731_17320 PF02895 Signal transducing histidine kinase, homodimeric domain DS731_17320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_17325 PF01584 CheW-like domain DS731_17330 PF13426 PAS domain DS731_17330 PF08447 PAS fold DS731_17330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_17335 PF03705 CheR methyltransferase, all-alpha domain DS731_17335 PF01739 CheR methyltransferase, SAM binding domain DS731_17340 PF03975 CheD chemotactic sensory transduction DS731_17345 PF00072 Response regulator receiver domain DS731_17345 PF01339 CheB methylesterase DS731_17350 PF08769 Sporulation initiation factor Spo0A C terminal DS731_17350 PF00072 Response regulator receiver domain DS731_17360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_17360 PF00512 His Kinase A (phospho-acceptor) domain DS731_17360 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_17365 PF00990 Diguanylate cyclase, GGDEF domain DS731_17365 PF07694 5TMR of 5TMR-LYT DS731_17370 PF03104 DNA polymerase family B, exonuclease domain DS731_17370 PF00136 DNA polymerase family B DS731_17415 PF05958 tRNA (Uracil-5-)-methyltransferase DS731_17420 PF00440 Bacterial regulatory proteins, tetR family DS731_17430 PF00990 Diguanylate cyclase, GGDEF domain DS731_17430 PF03707 Bacterial signalling protein N terminal repeat DS731_17430 PF00563 EAL domain DS731_17435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_17435 PF00512 His Kinase A (phospho-acceptor) domain DS731_17440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DS731_17440 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS731_17450 PF00563 EAL domain DS731_17450 PF03707 Bacterial signalling protein N terminal repeat DS731_17450 PF00990 Diguanylate cyclase, GGDEF domain DS731_17460 PF01507 Phosphoadenosine phosphosulfate reductase family DS731_17465 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DS731_17465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DS731_17470 PF00667 FAD binding domain DS731_17470 PF00175 Oxidoreductase NAD-binding domain DS731_17470 PF00258 Flavodoxin DS731_17490 PF04024 PspC domain DS731_17495 PF04012 PspA/IM30 family DS731_17505 PF01207 Dihydrouridine synthase (Dus) DS731_17515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_17515 PF00672 HAMP domain DS731_17515 PF00512 His Kinase A (phospho-acceptor) domain DS731_17515 PF16527 Two-component sensor protein CpxA, periplasmic domain DS731_17520 PF00486 Transcriptional regulatory protein, C terminal DS731_17520 PF00072 Response regulator receiver domain DS731_17530 PF03176 MMPL family DS731_17530 PF12823 Domain of unknown function (DUF3817) DS731_17535 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DS731_17545 PF07676 WD40-like Beta Propeller Repeat DS731_17545 PF00326 Prolyl oligopeptidase family DS731_17550 PF00005 ABC transporter DS731_17550 PF03412 Peptidase C39 family DS731_17550 PF00664 ABC transporter transmembrane region DS731_17570 PF00593 TonB dependent receptor DS731_17570 PF07715 TonB-dependent Receptor Plug Domain DS731_17575 PF02371 Transposase IS116/IS110/IS902 family DS731_17575 PF01548 Transposase DS731_17580 PF08532 Beta-galactosidase trimerisation domain DS731_17580 PF02449 Beta-galactosidase DS731_17580 PF08533 Beta-galactosidase C-terminal domain DS731_17585 PF00356 Bacterial regulatory proteins, lacI family DS731_17605 PF05362 Lon protease (S16) C-terminal proteolytic domain DS731_17605 PF02190 ATP-dependent protease La (LON) substrate-binding domain DS731_17605 PF00004 ATPase family associated with various cellular activities (AAA) DS731_17610 PF03707 Bacterial signalling protein N terminal repeat DS731_17610 PF00990 Diguanylate cyclase, GGDEF domain DS731_17610 PF00563 EAL domain DS731_17615 PF00756 Putative esterase DS731_17620 PF01553 Acyltransferase DS731_17625 PF01553 Acyltransferase DS731_17630 PF00924 Mechanosensitive ion channel DS731_17645 PF01370 NAD dependent epimerase/dehydratase family DS731_17650 PF00209 Sodium:neurotransmitter symporter family DS731_17665 PF01625 Peptide methionine sulfoxide reductase DS731_17670 PF00210 Ferritin-like domain DS731_17685 PF00258 Flavodoxin DS731_17695 PF02472 Biopolymer transport protein ExbD/TolR DS731_17705 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) DS731_17705 PF13176 Tetratricopeptide repeat DS731_17710 PF01270 Glycosyl hydrolases family 8 DS731_17720 PF03170 Bacterial cellulose synthase subunit DS731_17720 PF00535 Glycosyl transferase family 2 DS731_17720 PF07238 PilZ domain DS731_17730 PF05175 Methyltransferase small domain DS731_17735 PF13460 NAD(P)H-binding DS731_17740 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DS731_17740 PF00326 Prolyl oligopeptidase family DS731_17745 PF08000 Bacterial PH domain DS731_17750 PF00563 EAL domain DS731_17750 PF08448 PAS fold DS731_17750 PF00990 Diguanylate cyclase, GGDEF domain DS731_17760 PF00291 Pyridoxal-phosphate dependent enzyme DS731_17765 PF07969 Amidohydrolase family DS731_17775 PF00817 impB/mucB/samB family DS731_17775 PF11799 impB/mucB/samB family C-terminal domain DS731_17775 PF11798 IMS family HHH motif DS731_17795 PF02424 ApbE family DS731_17800 PF00111 2Fe-2S iron-sulfur cluster binding domain DS731_17800 PF00175 Oxidoreductase NAD-binding domain DS731_17800 PF00970 Oxidoreductase FAD-binding domain DS731_17805 PF02508 Rnf-Nqr subunit, membrane protein DS731_17810 PF02508 Rnf-Nqr subunit, membrane protein DS731_17815 PF04205 FMN-binding domain DS731_17820 PF03116 NQR2, RnfD, RnfE family DS731_17825 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) DS731_17825 PF11973 NQRA C-terminal domain DS731_17830 PF07055 Enoyl reductase FAD binding domain DS731_17830 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase DS731_17830 PF12241 Trans-2-enoyl-CoA reductase catalytic region DS731_17835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS731_17835 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DS731_17840 PF00311 Phosphoenolpyruvate carboxylase DS731_17845 PF13333 Integrase core domain DS731_17845 PF00665 Integrase core domain DS731_17845 PF13276 HTH-like domain DS731_17870 PF00593 TonB dependent receptor DS731_17870 PF07715 TonB-dependent Receptor Plug Domain DS731_17880 PF00667 FAD binding domain DS731_17880 PF00175 Oxidoreductase NAD-binding domain DS731_17880 PF00258 Flavodoxin DS731_17885 PF00056 lactate/malate dehydrogenase, NAD binding domain DS731_17885 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DS731_17890 PF02863 Arginine repressor, C-terminal domain DS731_17890 PF01316 Arginine repressor, DNA binding domain DS731_17895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_17895 PF00529 HlyD membrane-fusion protein of T1SS DS731_17900 PF00873 AcrB/AcrD/AcrF family DS731_17905 PF02321 Outer membrane efflux protein DS731_17915 PF00593 TonB dependent receptor DS731_17930 PF00485 Phosphoribulokinase / Uridine kinase family DS731_17935 PF07670 Nucleoside recognition DS731_17935 PF01773 Na+ dependent nucleoside transporter N-terminus DS731_17935 PF07662 Na+ dependent nucleoside transporter C-terminus DS731_17950 PF00376 MerR family regulatory protein DS731_17950 PF13614 AAA domain DS731_17955 PF04399 Glutaredoxin 2, C terminal domain DS731_17955 PF13417 Glutathione S-transferase, N-terminal domain DS731_17960 PF00990 Diguanylate cyclase, GGDEF domain DS731_17970 PF00360 Phytochrome region DS731_17970 PF00990 Diguanylate cyclase, GGDEF domain DS731_17970 PF01590 GAF domain DS731_17970 PF00563 EAL domain DS731_17985 PF01380 SIS domain DS731_17985 PF00571 CBS domain DS731_17990 PF00474 Sodium:solute symporter family DS731_18000 PF00512 His Kinase A (phospho-acceptor) domain DS731_18000 PF00072 Response regulator receiver domain DS731_18000 PF01627 Hpt domain DS731_18000 PF00672 HAMP domain DS731_18000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_18010 PF18030 RimK PreATP-grasp domain DS731_18010 PF08443 RimK-like ATP-grasp domain DS731_18020 PF08443 RimK-like ATP-grasp domain DS731_18020 PF18030 RimK PreATP-grasp domain DS731_18025 PF00072 Response regulator receiver domain DS731_18025 PF00196 Bacterial regulatory proteins, luxR family DS731_18030 PF13193 AMP-binding enzyme C-terminal domain DS731_18030 PF00501 AMP-binding enzyme DS731_18030 PF16177 Acetyl-coenzyme A synthetase N-terminus DS731_18040 PF02690 Na+/Pi-cotransporter DS731_18045 PF00248 Aldo/keto reductase family DS731_18055 PF03143 Elongation factor Tu C-terminal domain DS731_18055 PF00009 Elongation factor Tu GTP binding domain DS731_18055 PF03144 Elongation factor Tu domain 2 DS731_18060 PF00009 Elongation factor Tu GTP binding domain DS731_18060 PF00679 Elongation factor G C-terminus DS731_18060 PF03144 Elongation factor Tu domain 2 DS731_18060 PF03764 Elongation factor G, domain IV DS731_18060 PF14492 Elongation Factor G, domain II DS731_18065 PF00177 Ribosomal protein S7p/S5e DS731_18070 PF00164 Ribosomal protein S12/S23 DS731_18075 PF04983 RNA polymerase Rpb1, domain 3 DS731_18075 PF05000 RNA polymerase Rpb1, domain 4 DS731_18075 PF04998 RNA polymerase Rpb1, domain 5 DS731_18075 PF00623 RNA polymerase Rpb1, domain 2 DS731_18075 PF04997 RNA polymerase Rpb1, domain 1 DS731_18080 PF04563 RNA polymerase beta subunit DS731_18080 PF04561 RNA polymerase Rpb2, domain 2 DS731_18080 PF00562 RNA polymerase Rpb2, domain 6 DS731_18080 PF04560 RNA polymerase Rpb2, domain 7 DS731_18080 PF10385 RNA polymerase beta subunit external 1 domain DS731_18080 PF04565 RNA polymerase Rpb2, domain 3 DS731_18085 PF16320 Ribosomal protein L7/L12 dimerisation domain DS731_18085 PF00542 Ribosomal protein L7/L12 C-terminal domain DS731_18090 PF00466 Ribosomal protein L10 DS731_18095 PF00687 Ribosomal protein L1p/L10e family DS731_18100 PF00298 Ribosomal protein L11, RNA binding domain DS731_18100 PF03946 Ribosomal protein L11, N-terminal domain DS731_18105 PF00467 KOW motif DS731_18105 PF02357 Transcription termination factor nusG DS731_18110 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DS731_18120 PF00664 ABC transporter transmembrane region DS731_18120 PF00005 ABC transporter DS731_18125 PF03737 Aldolase/RraA DS731_18130 PF00270 DEAD/DEAH box helicase DS731_18130 PF00271 Helicase conserved C-terminal domain DS731_18130 PF03880 DbpA RNA binding domain DS731_18140 PF01979 Amidohydrolase family DS731_18150 PF08212 Lipocalin-like domain DS731_18155 PF00248 Aldo/keto reductase family DS731_18160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DS731_18165 PF00480 ROK family DS731_18170 PF07690 Major Facilitator Superfamily DS731_18175 PF00128 Alpha amylase, catalytic domain DS731_18185 PF01227 GTP cyclohydrolase I DS731_18195 PF04371 Porphyromonas-type peptidyl-arginine deiminase DS731_18200 PF00795 Carbon-nitrogen hydrolase DS731_18215 PF00271 Helicase conserved C-terminal domain DS731_18215 PF00270 DEAD/DEAH box helicase DS731_18215 PF08494 DEAD/H associated DS731_18225 PF04679 ATP dependent DNA ligase C terminal region DS731_18225 PF04675 DNA ligase N terminus DS731_18225 PF01068 ATP dependent DNA ligase domain DS731_18230 PF08238 Sel1 repeat DS731_18240 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DS731_18245 PF00970 Oxidoreductase FAD-binding domain DS731_18245 PF00175 Oxidoreductase NAD-binding domain DS731_18250 PF04389 Peptidase family M28 DS731_18260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DS731_18260 PF02770 Acyl-CoA dehydrogenase, middle domain DS731_18260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DS731_18265 PF13404 AsnC-type helix-turn-helix domain DS731_18265 PF01037 Lrp/AsnC ligand binding domain DS731_18275 PF00155 Aminotransferase class I and II DS731_18280 PF00144 Beta-lactamase DS731_18295 PF01661 Macro domain DS731_18305 PF01869 BadF/BadG/BcrA/BcrD ATPase family DS731_18310 PF00356 Bacterial regulatory proteins, lacI family DS731_18320 PF00842 Alanine racemase, C-terminal domain DS731_18320 PF01168 Alanine racemase, N-terminal domain DS731_18325 PF00474 Sodium:solute symporter family DS731_18330 PF13580 SIS domain DS731_18335 PF07075 Protein of unknown function (DUF1343) DS731_18340 PF01418 Helix-turn-helix domain, rpiR family DS731_18340 PF01380 SIS domain DS731_18405 PF00144 Beta-lactamase DS731_18410 PF03553 Na+/H+ antiporter family DS731_18425 PF00171 Aldehyde dehydrogenase family DS731_18430 PF00709 Adenylosuccinate synthetase DS731_18435 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) DS731_18445 PF00085 Thioredoxin DS731_18455 PF07995 Glucose / Sorbosone dehydrogenase DS731_18460 PF00210 Ferritin-like domain DS731_18475 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DS731_18475 PF02222 ATP-grasp domain DS731_18480 PF00731 AIR carboxylase DS731_18485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_18485 PF03466 LysR substrate binding domain DS731_18490 PF06965 Na+/H+ antiporter 1 DS731_18495 PF09308 LuxQ, periplasmic DS731_18495 PF00512 His Kinase A (phospho-acceptor) domain DS731_18495 PF00072 Response regulator receiver domain DS731_18495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_18500 PF07687 Peptidase dimerisation domain DS731_18500 PF01546 Peptidase family M20/M25/M40 DS731_18505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DS731_18505 PF07498 Rho termination factor, N-terminal domain DS731_18505 PF07497 Rho termination factor, RNA-binding domain DS731_18510 PF00085 Thioredoxin DS731_18515 PF00271 Helicase conserved C-terminal domain DS731_18515 PF00270 DEAD/DEAH box helicase DS731_18520 PF02541 Ppx/GppA phosphatase family DS731_18525 PF00490 Delta-aminolevulinic acid dehydratase DS731_18530 PF00990 Diguanylate cyclase, GGDEF domain DS731_18535 PF01026 TatD related DNase DS731_18545 PF00902 Sec-independent protein translocase protein (TatC) DS731_18550 PF02416 mttA/Hcf106 family DS731_18555 PF02416 mttA/Hcf106 family DS731_18565 PF10369 Small subunit of acetolactate synthase DS731_18570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DS731_18570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DS731_18570 PF00205 Thiamine pyrophosphate enzyme, central domain DS731_18575 PF04219 Protein of unknown function, DUF DS731_18585 PF13181 Tetratricopeptide repeat DS731_18590 PF00593 TonB dependent receptor DS731_18590 PF07715 TonB-dependent Receptor Plug Domain DS731_18595 PF00962 Adenosine/AMP deaminase DS731_18610 PF00929 Exonuclease DS731_18615 PF03193 RsgA GTPase DS731_18620 PF02666 Phosphatidylserine decarboxylase DS731_18630 PF03009 Glycerophosphoryl diester phosphodiesterase family DS731_18640 PF04748 Divergent polysaccharide deacetylase DS731_18645 PF01551 Peptidase family M23 DS731_18655 PF00462 Glutaredoxin DS731_18660 PF02556 Preprotein translocase subunit SecB DS731_18665 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DS731_18665 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DS731_18675 PF00005 ABC transporter DS731_18675 PF02687 FtsX-like permease family DS731_18675 PF12704 MacB-like periplasmic core domain DS731_18680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_18685 PF00588 SpoU rRNA Methylase family DS731_18690 PF12146 Serine aminopeptidase, S33 DS731_18695 PF16527 Two-component sensor protein CpxA, periplasmic domain DS731_18695 PF00672 HAMP domain DS731_18695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_18695 PF00512 His Kinase A (phospho-acceptor) domain DS731_18700 PF00486 Transcriptional regulatory protein, C terminal DS731_18700 PF00072 Response regulator receiver domain DS731_18705 PF02142 MGS-like domain DS731_18710 PF02774 Semialdehyde dehydrogenase, dimerisation domain DS731_18710 PF01118 Semialdehyde dehydrogenase, NAD binding domain DS731_18715 PF00696 Amino acid kinase family DS731_18720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DS731_18720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DS731_18725 PF00764 Arginosuccinate synthase DS731_18730 PF14698 Argininosuccinate lyase C-terminal DS731_18730 PF00206 Lyase DS731_18735 PF00583 Acetyltransferase (GNAT) family DS731_18735 PF00696 Amino acid kinase family DS731_18750 PF04299 Putative FMN-binding domain DS731_18770 PF00390 Malic enzyme, N-terminal domain DS731_18770 PF03949 Malic enzyme, NAD binding domain DS731_18775 PF17092 Penicillin-binding protein OB-like domain DS731_18775 PF00905 Penicillin binding protein transpeptidase domain DS731_18775 PF00912 Transglycosylase DS731_18780 PF02491 SHS2 domain inserted in FTSA DS731_18800 PF07660 Secretin and TonB N terminus short domain DS731_18800 PF03958 Bacterial type II/III secretion system short domain DS731_18800 PF11741 AMIN domain DS731_18800 PF00263 Bacterial type II and III secretion system protein DS731_18805 PF01202 Shikimate kinase DS731_18810 PF01761 3-dehydroquinate synthase DS731_18820 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DS731_18825 PF02086 D12 class N6 adenine-specific DNA methyltransferase DS731_18845 PF00834 Ribulose-phosphate 3 epimerase family DS731_18850 PF00579 tRNA synthetases class I (W and Y) DS731_18855 PF00117 Glutamine amidotransferase class-I DS731_18865 PF00202 Aminotransferase class-III DS731_18870 PF04958 Arginine N-succinyltransferase beta subunit DS731_18875 PF00171 Aldehyde dehydrogenase family DS731_18885 PF00563 EAL domain DS731_18885 PF03707 Bacterial signalling protein N terminal repeat DS731_18885 PF00990 Diguanylate cyclase, GGDEF domain DS731_18895 PF03989 DNA gyrase C-terminal domain, beta-propeller DS731_18895 PF00521 DNA gyrase/topoisomerase IV, subunit A DS731_18905 PF00657 GDSL-like Lipase/Acylhydrolase DS731_18925 PF05336 L-rhamnose mutarotase DS731_18940 PF09224 Domain of unknown function (DUF1961) DS731_18950 PF07470 Glycosyl Hydrolase Family 88 DS731_18960 PF14583 Oligogalacturonate lyase DS731_18970 PF01614 Bacterial transcriptional regulator DS731_18970 PF09339 IclR helix-turn-helix domain DS731_18975 PF00294 pfkB family carbohydrate kinase DS731_18980 PF08220 DeoR-like helix-turn-helix domain DS731_18980 PF00455 DeoR C terminal sensor domain DS731_18985 PF00593 TonB dependent receptor DS731_18985 PF07715 TonB-dependent Receptor Plug Domain DS731_19000 PF00392 Bacterial regulatory proteins, gntR family DS731_19000 PF07702 UTRA domain DS731_19005 PF03553 Na+/H+ antiporter family DS731_19005 PF13726 Na+-H+ antiporter family DS731_19010 PF01979 Amidohydrolase family DS731_19015 PF00221 Aromatic amino acid lyase DS731_19025 PF17391 Urocanase N-terminal domain DS731_19025 PF17392 Urocanase C-terminal domain DS731_19025 PF01175 Urocanase Rossmann-like domain DS731_19030 PF01627 Hpt domain DS731_19030 PF00512 His Kinase A (phospho-acceptor) domain DS731_19030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_19030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DS731_19030 PF00672 HAMP domain DS731_19030 PF00072 Response regulator receiver domain DS731_19040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DS731_19040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DS731_19045 PF00202 Aminotransferase class-III DS731_19050 PF00211 Adenylate and Guanylate cyclase catalytic domain DS731_19050 PF00672 HAMP domain DS731_19055 PF04261 Dyp-type peroxidase family DS731_19065 PF18011 C-terminal domain found in long catalases DS731_19065 PF06628 Catalase-related immune-responsive DS731_19065 PF00199 Catalase DS731_19075 PF00199 Catalase DS731_19075 PF06628 Catalase-related immune-responsive DS731_19080 PF00909 Ammonium Transporter Family DS731_19085 PF00543 Nitrogen regulatory protein P-II DS731_19095 PF05661 Protein of unknown function (DUF808) DS731_19105 PF14814 Bifunctional transglycosylase second domain DS731_19105 PF00912 Transglycosylase DS731_19105 PF00905 Penicillin binding protein transpeptidase domain DS731_19115 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DS731_19115 PF00561 alpha/beta hydrolase fold DS731_19125 PF05233 PHB accumulation regulatory domain DS731_19125 PF07879 PHB/PHA accumulation regulator DNA-binding domain DS731_19145 PF13406 Transglycosylase SLT domain DS731_19155 PF04408 Helicase associated domain (HA2) DS731_19155 PF00270 DEAD/DEAH box helicase DS731_19155 PF08482 ATP-dependent helicase C-terminal DS731_19155 PF00271 Helicase conserved C-terminal domain DS731_19160 PF00990 Diguanylate cyclase, GGDEF domain DS731_19160 PF07694 5TMR of 5TMR-LYT DS731_19165 PF02834 LigT like Phosphoesterase DS731_19170 PF00551 Formyl transferase DS731_19170 PF01842 ACT domain DS731_19175 PF01432 Peptidase family M3 DS731_19195 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DS731_19200 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DS731_19205 PF13439 Glycosyltransferase Family 4 DS731_19205 PF00534 Glycosyl transferases group 1 DS731_19210 PF00583 Acetyltransferase (GNAT) family DS731_19215 PF01281 Ribosomal protein L9, N-terminal domain DS731_19215 PF03948 Ribosomal protein L9, C-terminal domain DS731_19220 PF01084 Ribosomal protein S18 DS731_19225 PF01250 Ribosomal protein S6 DS731_19230 PF06039 Malate:quinone oxidoreductase (Mqo) DS731_19245 PF05199 GMC oxidoreductase DS731_19245 PF00732 GMC oxidoreductase DS731_19255 PF03825 Nucleoside H+ symporter DS731_19265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DS731_19265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DS731_19270 PF00356 Bacterial regulatory proteins, lacI family DS731_19285 PF00330 Aconitase family (aconitate hydratase) DS731_19285 PF00694 Aconitase C-terminal domain DS731_19300 PF00083 Sugar (and other) transporter DS731_19305 PF12833 Helix-turn-helix domain DS731_19310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DS731_19310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DS731_19320 PF00155 Aminotransferase class I and II DS731_19325 PF00593 TonB dependent receptor DS731_19325 PF07715 TonB-dependent Receptor Plug Domain DS731_19330 PF03975 CheD chemotactic sensory transduction DS731_19335 PF01739 CheR methyltransferase, SAM binding domain DS731_19335 PF03705 CheR methyltransferase, all-alpha domain DS731_19340 PF13426 PAS domain DS731_19340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_19340 PF08447 PAS fold DS731_19345 PF01584 CheW-like domain DS731_19350 PF09078 CheY binding DS731_19350 PF02895 Signal transducing histidine kinase, homodimeric domain DS731_19350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_19350 PF01627 Hpt domain DS731_19350 PF01584 CheW-like domain DS731_19355 PF00072 Response regulator receiver domain DS731_19365 PF14685 Tricorn protease PDZ domain DS731_19365 PF14684 Tricorn protease C1 domain DS731_19365 PF03572 Peptidase family S41 DS731_19365 PF07676 WD40-like Beta Propeller Repeat DS731_19385 PF04362 Bacterial Fe(2+) trafficking DS731_19390 PF14815 NUDIX domain DS731_19390 PF00633 Helix-hairpin-helix motif DS731_19390 PF00730 HhH-GPD superfamily base excision DNA repair protein DS731_19395 PF00561 alpha/beta hydrolase fold DS731_19400 PF02390 Putative methyltransferase DS731_19405 PF05175 Methyltransferase small domain DS731_19405 PF08468 Methyltransferase small domain N-terminal DS731_19410 PF00534 Glycosyl transferases group 1 DS731_19410 PF08323 Starch synthase catalytic domain DS731_19415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_19415 PF00512 His Kinase A (phospho-acceptor) domain DS731_19415 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_19420 PF00486 Transcriptional regulatory protein, C terminal DS731_19420 PF00072 Response regulator receiver domain DS731_19425 PF01523 Putative modulator of DNA gyrase DS731_19430 PF04751 Protein of unknown function (DUF615) DS731_19445 PF01523 Putative modulator of DNA gyrase DS731_19450 PF00795 Carbon-nitrogen hydrolase DS731_19460 PF00575 S1 RNA binding domain DS731_19460 PF10150 Ribonuclease E/G family DS731_19465 PF02545 Maf-like protein DS731_19470 PF04093 rod shape-determining protein MreD DS731_19475 PF04085 rod shape-determining protein MreC DS731_19500 PF00114 Pilin (bacterial filament) DS731_19500 PF07963 Prokaryotic N-terminal methylation motif DS731_19505 PF00114 Pilin (bacterial filament) DS731_19505 PF07963 Prokaryotic N-terminal methylation motif DS731_19510 PF07963 Prokaryotic N-terminal methylation motif DS731_19510 PF00114 Pilin (bacterial filament) DS731_19520 PF00482 Type II secretion system (T2SS), protein F DS731_19535 PF13401 AAA domain DS731_19535 PF01471 Putative peptidoglycan binding domain DS731_19540 PF00263 Bacterial type II and III secretion system protein DS731_19540 PF03958 Bacterial type II/III secretion system short domain DS731_19570 PF14602 Hexapeptide repeat of succinyl-transferase DS731_19570 PF12464 Maltose acetyltransferase DS731_19575 PF00593 TonB dependent receptor DS731_19575 PF07715 TonB-dependent Receptor Plug Domain DS731_19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_19585 PF03466 LysR substrate binding domain DS731_19595 PF00436 Single-strand binding protein family DS731_19605 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DS731_19605 PF02837 Glycosyl hydrolases family 2, sugar binding domain DS731_19605 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 DS731_19605 PF16355 Domain of unknown function (DUF4982) DS731_19605 PF00703 Glycosyl hydrolases family 2 DS731_19610 PF16363 GDP-mannose 4,6 dehydratase DS731_19630 PF02371 Transposase IS116/IS110/IS902 family DS731_19630 PF01548 Transposase DS731_19635 PF00474 Sodium:solute symporter family DS731_19640 PF10509 Galactokinase galactose-binding signature DS731_19640 PF00288 GHMP kinases N terminal domain DS731_19640 PF08544 GHMP kinases C terminal DS731_19645 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DS731_19645 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DS731_19655 PF00356 Bacterial regulatory proteins, lacI family DS731_19670 PF03600 Citrate transporter DS731_19670 PF02080 TrkA-C domain DS731_19675 PF02225 PA domain DS731_19675 PF04389 Peptidase family M28 DS731_19685 PF07690 Major Facilitator Superfamily DS731_19690 PF17755 UvrA DNA-binding domain DS731_19690 PF00005 ABC transporter DS731_19690 PF17760 UvrA interaction domain DS731_19710 PF01799 [2Fe-2S] binding domain DS731_19710 PF00111 2Fe-2S iron-sulfur cluster binding domain DS731_19715 PF03450 CO dehydrogenase flavoprotein C-terminal domain DS731_19715 PF00941 FAD binding domain in molybdopterin dehydrogenase DS731_19720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DS731_19720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DS731_19735 PF16916 Dimerisation domain of Zinc Transporter DS731_19735 PF01545 Cation efflux family DS731_19740 PF03459 TOBE domain DS731_19740 PF17912 MalK OB fold domain DS731_19740 PF00005 ABC transporter DS731_19745 PF00005 ABC transporter DS731_19745 PF00664 ABC transporter transmembrane region DS731_19750 PF08173 Membrane bound YbgT-like protein DS731_19755 PF02322 Cytochrome bd terminal oxidase subunit II DS731_19760 PF01654 Cytochrome bd terminal oxidase subunit I DS731_19765 PF02954 Bacterial regulatory protein, Fis family DS731_19765 PF00072 Response regulator receiver domain DS731_19765 PF00158 Sigma-54 interaction domain DS731_19780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DS731_19780 PF00529 HlyD membrane-fusion protein of T1SS DS731_19785 PF01047 MarR family DS731_19810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_19810 PF13426 PAS domain DS731_19810 PF08447 PAS fold DS731_19815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DS731_19815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DS731_19835 PF00360 Phytochrome region DS731_19835 PF08446 PAS fold DS731_19835 PF00512 His Kinase A (phospho-acceptor) domain DS731_19835 PF01590 GAF domain DS731_19835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_19870 PF00593 TonB dependent receptor DS731_19870 PF07715 TonB-dependent Receptor Plug Domain DS731_19880 PF00472 RF-1 domain DS731_19895 PF07992 Pyridine nucleotide-disulphide oxidoreductase DS731_19900 PF00593 TonB dependent receptor DS731_19900 PF07715 TonB-dependent Receptor Plug Domain DS731_19910 PF00171 Aldehyde dehydrogenase family DS731_19915 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_19920 PF00528 Binding-protein-dependent transport system inner membrane component DS731_19925 PF00005 ABC transporter DS731_19935 PF00512 His Kinase A (phospho-acceptor) domain DS731_19935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_19935 PF01627 Hpt domain DS731_19935 PF00072 Response regulator receiver domain DS731_19940 PF03466 LysR substrate binding domain DS731_19940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_19945 PF01810 LysE type translocator DS731_19950 PF00196 Bacterial regulatory proteins, luxR family DS731_19950 PF00072 Response regulator receiver domain DS731_19955 PF00005 ABC transporter DS731_19960 PF00005 ABC transporter DS731_19990 PF12801 4Fe-4S binding domain DS731_19990 PF04205 FMN-binding domain DS731_19995 PF00561 alpha/beta hydrolase fold DS731_20005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_20005 PF03466 LysR substrate binding domain DS731_20010 PF07690 Major Facilitator Superfamily DS731_20025 PF00672 HAMP domain DS731_20025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_20025 PF00512 His Kinase A (phospho-acceptor) domain DS731_20030 PF00072 Response regulator receiver domain DS731_20030 PF00486 Transcriptional regulatory protein, C terminal DS731_20035 PF00873 AcrB/AcrD/AcrF family DS731_20045 PF02321 Outer membrane efflux protein DS731_20060 PF00072 Response regulator receiver domain DS731_20065 PF01048 Phosphorylase superfamily DS731_20080 PF03466 LysR substrate binding domain DS731_20080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_20085 PF00300 Histidine phosphatase superfamily (branch 1) DS731_20090 PF00535 Glycosyl transferase family 2 DS731_20100 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase DS731_20105 PF00144 Beta-lactamase DS731_20110 PF00933 Glycosyl hydrolase family 3 N terminal domain DS731_20115 PF03702 Anhydro-N-acetylmuramic acid kinase DS731_20120 PF01292 Prokaryotic cytochrome b561 DS731_20125 PF13426 PAS domain DS731_20125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_20125 PF08447 PAS fold DS731_20130 PF00107 Zinc-binding dehydrogenase DS731_20130 PF08240 Alcohol dehydrogenase GroES-like domain DS731_20135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_20135 PF03466 LysR substrate binding domain DS731_20140 PF01734 Patatin-like phospholipase DS731_20145 PF03976 Polyphosphate kinase 2 (PPK2) DS731_20155 PF01063 Amino-transferase class IV DS731_20165 PF01433 Peptidase family M1 domain DS731_20170 PF04893 Yip1 domain DS731_20175 PF03275 UDP-galactopyranose mutase DS731_20180 PF03466 LysR substrate binding domain DS731_20180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_20220 PF00114 Pilin (bacterial filament) DS731_20220 PF07963 Prokaryotic N-terminal methylation motif DS731_20235 PF04820 Tryptophan halogenase DS731_20240 PF07715 TonB-dependent Receptor Plug Domain DS731_20240 PF00593 TonB dependent receptor DS731_20285 PF00902 Sec-independent protein translocase protein (TatC) DS731_20290 PF02416 mttA/Hcf106 family DS731_20295 PF02416 mttA/Hcf106 family DS731_20315 PF00795 Carbon-nitrogen hydrolase DS731_20320 PF01380 SIS domain DS731_20325 PF08220 DeoR-like helix-turn-helix domain DS731_20330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DS731_20330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DS731_20340 PF00132 Bacterial transferase hexapeptide (six repeats) DS731_20340 PF14602 Hexapeptide repeat of succinyl-transferase DS731_20340 PF12804 MobA-like NTP transferase domain DS731_20345 PF00990 Diguanylate cyclase, GGDEF domain DS731_20365 PF07729 FCD domain DS731_20365 PF00392 Bacterial regulatory proteins, gntR family DS731_20370 PF00474 Sodium:solute symporter family DS731_20375 PF03055 Retinal pigment epithelial membrane protein DS731_20385 PF07730 Histidine kinase DS731_20390 PF00196 Bacterial regulatory proteins, luxR family DS731_20390 PF00072 Response regulator receiver domain DS731_20395 PF04616 Glycosyl hydrolases family 43 DS731_20395 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain DS731_20400 PF04616 Glycosyl hydrolases family 43 DS731_20405 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DS731_20405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS731_20415 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain DS731_20415 PF04616 Glycosyl hydrolases family 43 DS731_20435 PF04616 Glycosyl hydrolases family 43 DS731_20435 PF16369 C-terminal lipocalin-like domain DS731_20445 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DS731_20455 PF01263 Aldose 1-epimerase DS731_20460 PF13419 Haloacid dehalogenase-like hydrolase DS731_20465 PF11762 L-arabinose isomerase C-terminal domain DS731_20465 PF02610 L-arabinose isomerase DS731_20470 PF00596 Class II Aldolase and Adducin N-terminal domain DS731_20475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DS731_20475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DS731_20480 PF00923 Transaldolase/Fructose-6-phosphate aldolase DS731_20485 PF02779 Transketolase, pyrimidine binding domain DS731_20485 PF02780 Transketolase, C-terminal domain DS731_20485 PF00456 Transketolase, thiamine diphosphate binding domain DS731_20500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DS731_20500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DS731_20505 PF12833 Helix-turn-helix domain DS731_20505 PF02805 Metal binding domain of Ada DS731_20520 PF03707 Bacterial signalling protein N terminal repeat DS731_20520 PF00990 Diguanylate cyclase, GGDEF domain DS731_20520 PF13188 PAS domain DS731_20520 PF00563 EAL domain DS731_20530 PF00144 Beta-lactamase DS731_20535 PF17810 Arginine decarboxylase helical bundle domain DS731_20535 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DS731_20535 PF17944 Arginine decarboxylase C-terminal helical extension DS731_20540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DS731_20540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DS731_20545 PF04389 Peptidase family M28 DS731_20545 PF04151 Bacterial pre-peptidase C-terminal domain DS731_20550 PF00593 TonB dependent receptor DS731_20550 PF07715 TonB-dependent Receptor Plug Domain DS731_20555 PF00881 Nitroreductase family DS731_20560 PF00797 N-acetyltransferase DS731_20585 PF02233 NAD(P) transhydrogenase beta subunit DS731_20590 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DS731_20595 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DS731_20595 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DS731_20610 PF00512 His Kinase A (phospho-acceptor) domain DS731_20610 PF00497 Bacterial extracellular solute-binding proteins, family 3 DS731_20610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_20625 PF00118 TCP-1/cpn60 chaperonin family DS731_20630 PF00166 Chaperonin 10 Kd subunit DS731_20640 PF02683 Cytochrome C biogenesis protein transmembrane region DS731_20640 PF11412 Disulphide bond corrector protein DsbC DS731_20645 PF00593 TonB dependent receptor DS731_20660 PF01220 Dehydroquinase class II DS731_20665 PF00364 Biotin-requiring enzyme DS731_20670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DS731_20670 PF00289 Biotin carboxylase, N-terminal domain DS731_20670 PF02785 Biotin carboxylase C-terminal domain DS731_20690 PF07733 Bacterial DNA polymerase III alpha NTPase domain DS731_20690 PF00929 Exonuclease DS731_20690 PF02811 PHP domain DS731_20690 PF11490 DNA polymerase III polC-type N-terminus II DS731_20690 PF14579 Helix-hairpin-helix motif DS731_20690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DS731_20690 PF01336 OB-fold nucleic acid binding domain DS731_20705 PF01355 High potential iron-sulfur protein DS731_20735 PF02472 Biopolymer transport protein ExbD/TolR DS731_20740 PF01618 MotA/TolQ/ExbB proton channel family DS731_20745 PF01618 MotA/TolQ/ExbB proton channel family DS731_20755 PF07715 TonB-dependent Receptor Plug Domain DS731_20755 PF00593 TonB dependent receptor DS731_20770 PF01207 Dihydrouridine synthase (Dus) DS731_20775 PF02954 Bacterial regulatory protein, Fis family DS731_20780 PF01808 AICARFT/IMPCHase bienzyme DS731_20780 PF02142 MGS-like domain DS731_20790 PF02843 Phosphoribosylglycinamide synthetase, C domain DS731_20790 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DS731_20790 PF02844 Phosphoribosylglycinamide synthetase, N domain DS731_20800 PF00485 Phosphoribulokinase / Uridine kinase family DS731_20805 PF03600 Citrate transporter DS731_20810 PF00072 Response regulator receiver domain DS731_20810 PF00486 Transcriptional regulatory protein, C terminal DS731_20815 PF00672 HAMP domain DS731_20815 PF00512 His Kinase A (phospho-acceptor) domain DS731_20815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_20840 PF01430 Hsp33 protein DS731_20845 PF01479 S4 domain DS731_20850 PF11356 Type II secretion system protein C DS731_20855 PF03958 Bacterial type II/III secretion system short domain DS731_20855 PF00263 Bacterial type II and III secretion system protein DS731_20860 PF00437 Type II/IV secretion system protein DS731_20865 PF00482 Type II secretion system (T2SS), protein F DS731_20870 PF08334 Type II secretion system (T2SS), protein G DS731_20870 PF07963 Prokaryotic N-terminal methylation motif DS731_20875 PF12019 Type II transport protein GspH DS731_20880 PF02501 Type II secretion system (T2SS), protein I DS731_20880 PF07963 Prokaryotic N-terminal methylation motif DS731_20885 PF07963 Prokaryotic N-terminal methylation motif DS731_20885 PF11612 Type II secretion system (T2SS), protein J DS731_20890 PF03934 Type II secretion system (T2SS), protein K DS731_20895 PF05134 Type II secretion system (T2SS), protein L DS731_20895 PF12693 GspL periplasmic domain DS731_20900 PF04612 Type II secretion system (T2SS), protein M DS731_20910 PF00171 Aldehyde dehydrogenase family DS731_20915 PF01931 Protein of unknown function DUF84 DS731_20920 PF13419 Haloacid dehalogenase-like hydrolase DS731_20925 PF00293 NUDIX domain DS731_20930 PF00459 Inositol monophosphatase family DS731_20950 PF04349 Periplasmic glucan biosynthesis protein, MdoG DS731_20960 PF03466 LysR substrate binding domain DS731_20960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_20970 PF06794 Uncharacterised protein family (UPF0270) DS731_20975 PF00561 alpha/beta hydrolase fold DS731_20985 PF12848 ABC transporter DS731_20985 PF00005 ABC transporter DS731_20990 PF09526 Probable metal-binding protein (DUF2387) DS731_21005 PF04102 SlyX DS731_21015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DS731_21015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase DS731_21020 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DS731_21025 PF01965 DJ-1/PfpI family DS731_21035 PF01272 Transcription elongation factor, GreA/GreB, C-term DS731_21035 PF03449 Transcription elongation factor, N-terminal DS731_21040 PF00355 Rieske [2Fe-2S] domain DS731_21045 PF00111 2Fe-2S iron-sulfur cluster binding domain DS731_21045 PF00175 Oxidoreductase NAD-binding domain DS731_21050 PF12802 MarR family DS731_21055 PF16921 Tex protein YqgF-like domain DS731_21055 PF09371 Tex-like protein N-terminal domain DS731_21055 PF00575 S1 RNA binding domain DS731_21055 PF17674 HHH domain DS731_21060 PF13276 HTH-like domain DS731_21060 PF00665 Integrase core domain DS731_21060 PF13333 Integrase core domain DS731_21070 PF00512 His Kinase A (phospho-acceptor) domain DS731_21070 PF09308 LuxQ, periplasmic DS731_21070 PF00072 Response regulator receiver domain DS731_21070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DS731_21085 PF00544 Pectate lyase DS731_21105 PF00561 alpha/beta hydrolase fold DS731_21120 PF01521 Iron-sulphur cluster biosynthesis DS731_21120 PF01106 NifU-like domain DS731_21130 PF01554 MatE DS731_21145 PF02630 SCO1/SenC DS731_21150 PF01040 UbiA prenyltransferase family DS731_21155 PF02628 Cytochrome oxidase assembly protein DS731_21175 PF00510 Cytochrome c oxidase subunit III DS731_21180 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DS731_21185 PF00115 Cytochrome C and Quinol oxidase polypeptide I DS731_21190 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DS731_21190 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DS731_21195 PF04264 YceI-like domain DS731_21205 PF00717 Peptidase S24-like DS731_21205 PF01726 LexA DNA binding domain DS731_21210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_21210 PF03466 LysR substrate binding domain DS731_21225 PF00356 Bacterial regulatory proteins, lacI family DS731_21230 PF00593 TonB dependent receptor DS731_21230 PF07715 TonB-dependent Receptor Plug Domain DS731_21235 PF00884 Sulfatase DS731_21235 PF16347 Domain of unknown function (DUF4976) DS731_21240 PF16347 Domain of unknown function (DUF4976) DS731_21240 PF00884 Sulfatase DS731_21245 PF00884 Sulfatase DS731_21245 PF16385 Domain of unknown function DS731_21265 PF01553 Acyltransferase DS731_21275 PF00585 C-terminal regulatory domain of Threonine dehydratase DS731_21275 PF00291 Pyridoxal-phosphate dependent enzyme DS731_21280 PF00920 Dehydratase family DS731_21285 PF01063 Amino-transferase class IV DS731_21290 PF03458 UPF0126 domain DS731_21295 PF13335 Magnesium chelatase, subunit ChlI C-terminal DS731_21295 PF01078 Magnesium chelatase, subunit ChlI DS731_21300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DS731_21300 PF03466 LysR substrate binding domain DS731_21305 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DS731_21305 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DS731_21310 PF00326 Prolyl oligopeptidase family DS731_21315 PF07690 Major Facilitator Superfamily DS731_21320 PF01103 Surface antigen DS731_21320 PF17243 POTRA domain TamA domain 1 DS731_21325 PF04357 TamB, inner membrane protein subunit of TAM complex DS731_21330 PF00296 Luciferase-like monooxygenase DS731_21350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DS731_21350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DS731_21360 PF01472 PUA domain DS731_21360 PF00696 Amino acid kinase family DS731_21380 PF03109 ABC1 family DS731_21400 PF01979 Amidohydrolase family DS731_21430 PF13276 HTH-like domain DS731_21430 PF13333 Integrase core domain DS731_21430 PF00665 Integrase core domain DS731_21435 PF01206 Sulfurtransferase TusA DS731_21440 PF00156 Phosphoribosyl transferase domain DS731_21445 PF01138 3' exoribonuclease family, domain 1 DS731_21445 PF03725 3' exoribonuclease family, domain 2 DS731_21450 PF00326 Prolyl oligopeptidase family DS731_21455 PF03755 YicC-like family, N-terminal region DS731_21455 PF08340 Domain of unknown function (DUF1732) DS731_21460 PF00145 C-5 cytosine-specific DNA methylase DS731_21460 PF01381 Helix-turn-helix DS731_21465 PF03852 DNA mismatch endonuclease Vsr DS731_21475 PF00691 OmpA family DS731_21475 PF05736 OprF membrane domain DS731_21480 PF11871 Domain of unknown function (DUF3391) DS731_21480 PF01966 HD domain DS731_21495 PF14497 Glutathione S-transferase, C-terminal domain DS731_21495 PF02798 Glutathione S-transferase, N-terminal domain DS731_21515 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DS731_21515 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DS731_21520 PF02874 ATP synthase alpha/beta family, beta-barrel domain DS731_21520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DS731_21525 PF00231 ATP synthase DS731_21530 PF00306 ATP synthase alpha/beta chain, C terminal domain DS731_21530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DS731_21530 PF02874 ATP synthase alpha/beta family, beta-barrel domain DS731_21535 PF00213 ATP synthase delta (OSCP) subunit DS731_21540 PF00430 ATP synthase B/B' CF(0) DS731_21545 PF00137 ATP synthase subunit C DS731_21550 PF00119 ATP synthase A chain DS731_21560 PF02195 ParB-like nuclease domain DS731_21560 PF17762 HTH domain found in ParB protein DS731_21565 PF13614 AAA domain DS731_21570 PF02527 rRNA small subunit methyltransferase G DS731_21575 PF01134 Glucose inhibited division protein A DS731_21575 PF13932 GidA associated domain DS731_21590 PF00258 Flavodoxin DS731_21595 PF10396 GTP-binding protein TrmE N-terminus DS731_21595 PF12631 MnmE helical domain DS731_21595 PF01926 50S ribosome-binding GTPase DS731_21600 PF04461 Protein of unknown function (DUF520) DS731_21605 PF02096 60Kd inner membrane protein DS731_21605 PF14849 YidC periplasmic domain DS731_21610 PF01809 Putative membrane protein insertion efficiency factor DS731_21615 PF00825 Ribonuclease P DS731_21620 PF00468 Ribosomal protein L34 DS731_21710 PF07804 HipA-like C-terminal domain DS731_21710 PF13657 HipA N-terminal domain DS731_21725 PF02899 Phage integrase, N-terminal SAM-like domain DS731_21725 PF00589 Phage integrase family DS731_21730 PF12729 Four helix bundle sensory module for signal transduction DS731_21730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_21730 PF00672 HAMP domain DS731_21735 PF03707 Bacterial signalling protein N terminal repeat DS731_21735 PF00990 Diguanylate cyclase, GGDEF domain DS731_21735 PF00563 EAL domain DS731_21745 PF01396 Topoisomerase DNA binding C4 zinc finger DS731_21745 PF01751 Toprim domain DS731_21745 PF01131 DNA topoisomerase DS731_21775 PF02899 Phage integrase, N-terminal SAM-like domain DS731_21775 PF00589 Phage integrase family DS731_21840 PF00115 Cytochrome C and Quinol oxidase polypeptide I DS731_21865 PF00990 Diguanylate cyclase, GGDEF domain DS731_21875 PF00462 Glutaredoxin DS731_21890 PF00067 Cytochrome P450 DS731_21900 PF00871 Acetokinase family DS731_21910 PF01654 Cytochrome bd terminal oxidase subunit I DS731_21915 PF02322 Cytochrome bd terminal oxidase subunit II DS731_21925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_21925 PF00672 HAMP domain DS731_21925 PF12729 Four helix bundle sensory module for signal transduction DS731_21935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DS731_21935 PF13426 PAS domain DS731_21935 PF08447 PAS fold DS731_21945 PF03707 Bacterial signalling protein N terminal repeat DS731_21945 PF00990 Diguanylate cyclase, GGDEF domain DS731_21945 PF00563 EAL domain DS731_21945 PF03707 Bacterial signalling protein N terminal repeat DS731_21945 PF00990 Diguanylate cyclase, GGDEF domain DS731_21945 PF00563 EAL domain DS731_21955 PF00239 Resolvase, N terminal domain DS731_21955 PF02796 Helix-turn-helix domain of resolvase DS731_21960 PF00239 Resolvase, N terminal domain DS731_21960 PF02796 Helix-turn-helix domain of resolvase DS731_21975 PF02195 ParB-like nuclease domain DS731_21975 PF17762 HTH domain found in ParB protein DS731_21980 PF13614 AAA domain