locus-tag class description AVL57_00060 PF07859 alpha/beta hydrolase fold AVL57_00075 PF12833 Helix-turn-helix domain AVL57_00075 PF02311 AraC-like ligand binding domain AVL57_00085 PF01219 Prokaryotic diacylglycerol kinase AVL57_00100 PF00535 Glycosyl transferase family 2 AVL57_00105 PF08019 Phosphoethanolamine transferase EptA/EptB AVL57_00105 PF00884 Sulfatase AVL57_00110 PF00884 Sulfatase AVL57_00110 PF08019 Phosphoethanolamine transferase EptA/EptB AVL57_00120 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AVL57_00125 PF00535 Glycosyl transferase family 2 AVL57_00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_00135 PF00672 HAMP domain AVL57_00135 PF00512 His Kinase A (phospho-acceptor) domain AVL57_00140 PF00072 Response regulator receiver domain AVL57_00140 PF00486 Transcriptional regulatory protein, C terminal AVL57_00245 PF09722 Protein of unknown function (DUF2384) AVL57_00295 PF00437 Type II/IV secretion system protein AVL57_00375 PF00005 ABC transporter AVL57_00380 PF00005 ABC transporter AVL57_00380 PF02687 FtsX-like permease family AVL57_00380 PF12704 MacB-like periplasmic core domain AVL57_00395 PF13732 Domain of unknown function (DUF4162) AVL57_00395 PF00005 ABC transporter AVL57_00510 PF13333 Integrase core domain AVL57_00510 PF13276 HTH-like domain AVL57_00510 PF00665 Integrase core domain AVL57_00515 PF00665 Integrase core domain AVL57_00515 PF13936 Helix-turn-helix domain AVL57_00525 PF00672 HAMP domain AVL57_00525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_00525 PF00512 His Kinase A (phospho-acceptor) domain AVL57_00530 PF00072 Response regulator receiver domain AVL57_00530 PF00486 Transcriptional regulatory protein, C terminal AVL57_00555 PF00873 AcrB/AcrD/AcrF family AVL57_00580 PF13411 MerR HTH family regulatory protein AVL57_00585 PF00403 Heavy-metal-associated domain AVL57_00630 PF00665 Integrase core domain AVL57_00630 PF13333 Integrase core domain AVL57_00630 PF13276 HTH-like domain AVL57_00645 PF00551 Formyl transferase AVL57_00645 PF02911 Formyl transferase, C-terminal domain AVL57_00670 PF00462 Glutaredoxin AVL57_00685 PF05275 Copper resistance protein B precursor (CopB) AVL57_00690 PF00394 Multicopper oxidase AVL57_00690 PF07732 Multicopper oxidase AVL57_00690 PF07731 Multicopper oxidase AVL57_00725 PF00216 Bacterial DNA-binding protein AVL57_00745 PF13808 DDE_Tnp_1-associated AVL57_00745 PF01609 Transposase DDE domain AVL57_00855 PF13361 UvrD-like helicase C-terminal domain AVL57_00855 PF00580 UvrD/REP helicase N-terminal domain AVL57_00890 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AVL57_00920 PF07963 Prokaryotic N-terminal methylation motif AVL57_00920 PF00114 Pilin (bacterial filament) AVL57_00930 PF00437 Type II/IV secretion system protein AVL57_00930 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AVL57_00975 PF00990 Diguanylate cyclase, GGDEF domain AVL57_00975 PF00072 Response regulator receiver domain AVL57_01005 PF03527 RHS protein AVL57_01005 PF05593 RHS Repeat AVL57_01075 PF13361 UvrD-like helicase C-terminal domain AVL57_01075 PF00580 UvrD/REP helicase N-terminal domain AVL57_01110 PF13614 AAA domain AVL57_01220 PF11638 DnaA N-terminal domain AVL57_01220 PF00308 Bacterial dnaA protein AVL57_01220 PF08299 Bacterial dnaA protein helix-turn-helix AVL57_01225 PF02767 DNA polymerase III beta subunit, central domain AVL57_01225 PF00712 DNA polymerase III beta subunit, N-terminal domain AVL57_01225 PF02768 DNA polymerase III beta subunit, C-terminal domain AVL57_01230 PF02463 RecF/RecN/SMC N terminal domain AVL57_01235 PF00204 DNA gyrase B AVL57_01235 PF00986 DNA gyrase B subunit, carboxyl terminus AVL57_01235 PF18053 DNA gyrase B subunit insert domain AVL57_01235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_01235 PF01751 Toprim domain AVL57_01250 PF05746 DALR anticodon binding domain AVL57_01250 PF02092 Glycyl-tRNA synthetase beta subunit AVL57_01255 PF02091 Glycyl-tRNA synthetase alpha subunit AVL57_01260 PF03352 Methyladenine glycosylase AVL57_01270 PF04220 Der GTPase activator (YihI) AVL57_01275 PF00034 Cytochrome c AVL57_01280 PF01926 50S ribosome-binding GTPase AVL57_01285 PF01367 5'-3' exonuclease, C-terminal SAM fold AVL57_01285 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVL57_01285 PF00476 DNA polymerase family A AVL57_01285 PF01612 3'-5' exonuclease AVL57_01295 PF02386 Cation transport protein AVL57_01300 PF02080 TrkA-C domain AVL57_01300 PF02254 TrkA-N domain AVL57_01305 PF01029 NusB family AVL57_01305 PF01189 16S rRNA methyltransferase RsmB/F AVL57_01310 PF00551 Formyl transferase AVL57_01310 PF02911 Formyl transferase, C-terminal domain AVL57_01315 PF01327 Polypeptide deformylase AVL57_01325 PF17782 DprA winged helix domain AVL57_01325 PF02481 DNA recombination-mediator protein A AVL57_01330 PF04361 Protein of unknown function (DUF494) AVL57_01340 PF01300 Telomere recombination AVL57_01345 PF01218 Coproporphyrinogen III oxidase AVL57_01350 PF03922 OmpW family AVL57_01355 PF01152 Bacterial-like globin AVL57_01360 PF08501 Shikimate dehydrogenase substrate binding domain AVL57_01360 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVL57_01360 PF01488 Shikimate / quinate 5-dehydrogenase AVL57_01365 PF00132 Bacterial transferase hexapeptide (six repeats) AVL57_01410 PF01336 OB-fold nucleic acid binding domain AVL57_01410 PF14579 Helix-hairpin-helix motif AVL57_01410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVL57_01410 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVL57_01410 PF02811 PHP domain AVL57_01420 PF00154 recA bacterial DNA recombination protein AVL57_01440 PF02225 PA domain AVL57_01440 PF04389 Peptidase family M28 AVL57_01450 PF00440 Bacterial regulatory proteins, tetR family AVL57_01455 PF04127 DNA / pantothenate metabolism flavoprotein AVL57_01455 PF02441 Flavoprotein AVL57_01460 PF04002 RadC-like JAB domain AVL57_01480 PF06082 Exopolysaccharide biosynthesis protein YbjH AVL57_01485 PF01467 Cytidylyltransferase-like AVL57_01490 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVL57_01495 PF00830 Ribosomal L28 family AVL57_01500 PF00471 Ribosomal protein L33 AVL57_01510 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVL57_01510 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVL57_01510 PF06827 Zinc finger found in FPG and IleRS AVL57_01515 PF01467 Cytidylyltransferase-like AVL57_01525 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVL57_01540 PF00563 EAL domain AVL57_01540 PF00990 Diguanylate cyclase, GGDEF domain AVL57_01540 PF03707 Bacterial signalling protein N terminal repeat AVL57_01545 PF00155 Aminotransferase class I and II AVL57_01550 PF08240 Alcohol dehydrogenase GroES-like domain AVL57_01550 PF00107 Zinc-binding dehydrogenase AVL57_01555 PF00581 Rhodanese-like domain AVL57_01560 PF01694 Rhomboid family AVL57_01560 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AVL57_01570 PF04345 Chorismate lyase AVL57_01575 PF01040 UbiA prenyltransferase family AVL57_01580 PF04380 Membrane fusogenic activity AVL57_01585 PF13361 UvrD-like helicase C-terminal domain AVL57_01585 PF00580 UvrD/REP helicase N-terminal domain AVL57_01590 PF00563 EAL domain AVL57_01590 PF03707 Bacterial signalling protein N terminal repeat AVL57_01590 PF00990 Diguanylate cyclase, GGDEF domain AVL57_01595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVL57_01605 PF02810 SEC-C motif AVL57_01605 PF07516 SecA Wing and Scaffold domain AVL57_01605 PF01043 SecA preprotein cross-linking domain AVL57_01605 PF07517 SecA DEAD-like domain AVL57_01635 PF00183 Hsp90 protein AVL57_01640 PF00145 C-5 cytosine-specific DNA methylase AVL57_01645 PF02151 UvrB/uvrC motif AVL57_01645 PF00271 Helicase conserved C-terminal domain AVL57_01645 PF12344 Ultra-violet resistance protein B AVL57_01645 PF04851 Type III restriction enzyme, res subunit AVL57_01645 PF17757 UvrB interaction domain AVL57_01650 PF02652 L-lactate permease AVL57_01670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL57_01685 PF12833 Helix-turn-helix domain AVL57_01685 PF01965 DJ-1/PfpI family AVL57_01690 PF00355 Rieske [2Fe-2S] domain AVL57_01690 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AVL57_01700 PF00042 Globin AVL57_01700 PF00970 Oxidoreductase FAD-binding domain AVL57_01700 PF00175 Oxidoreductase NAD-binding domain AVL57_01705 PF00464 Serine hydroxymethyltransferase AVL57_01710 PF01266 FAD dependent oxidoreductase AVL57_01715 PF04267 Sarcosine oxidase, delta subunit family AVL57_01720 PF17806 Sarcosine oxidase A3 domain AVL57_01720 PF01571 Aminomethyltransferase folate-binding domain AVL57_01720 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVL57_01720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_01730 PF00551 Formyl transferase AVL57_01740 PF02028 BCCT, betaine/carnitine/choline family transporter AVL57_01745 PF03315 Serine dehydratase beta chain AVL57_01745 PF03313 Serine dehydratase alpha chain AVL57_01750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_01750 PF03466 LysR substrate binding domain AVL57_01765 PF00171 Aldehyde dehydrogenase family AVL57_01770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVL57_01770 PF13378 Enolase C-terminal domain-like AVL57_01775 PF05199 GMC oxidoreductase AVL57_01775 PF00732 GMC oxidoreductase AVL57_01780 PF00171 Aldehyde dehydrogenase family AVL57_01785 PF07715 TonB-dependent Receptor Plug Domain AVL57_01785 PF00593 TonB dependent receptor AVL57_01790 PF13181 Tetratricopeptide repeat AVL57_01795 PF00072 Response regulator receiver domain AVL57_01795 PF01627 Hpt domain AVL57_01795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_01795 PF00672 HAMP domain AVL57_01795 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL57_01795 PF00512 His Kinase A (phospho-acceptor) domain AVL57_01800 PF07715 TonB-dependent Receptor Plug Domain AVL57_01800 PF00593 TonB dependent receptor AVL57_01805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_01805 PF03466 LysR substrate binding domain AVL57_01810 PF00171 Aldehyde dehydrogenase family AVL57_01815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVL57_01815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVL57_01820 PF13533 Biotin-lipoyl like AVL57_01825 PF00005 ABC transporter AVL57_01840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL57_01840 PF02770 Acyl-CoA dehydrogenase, middle domain AVL57_01840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL57_01845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_01845 PF03466 LysR substrate binding domain AVL57_01850 PF00753 Metallo-beta-lactamase superfamily AVL57_01855 PF02627 Carboxymuconolactone decarboxylase family AVL57_01860 PF04317 YcjX-like family, DUF463 AVL57_01880 PF06968 Biotin and Thiamin Synthesis associated domain AVL57_01880 PF04055 Radical SAM superfamily AVL57_01885 PF05690 Thiazole biosynthesis protein ThiG AVL57_01895 PF00899 ThiF family AVL57_01900 PF02581 Thiamine monophosphate synthase AVL57_01905 PF13667 ThiC-associated domain AVL57_01905 PF01964 Radical SAM ThiC family AVL57_01910 PF00593 TonB dependent receptor AVL57_01910 PF07715 TonB-dependent Receptor Plug Domain AVL57_01915 PF00296 Luciferase-like monooxygenase AVL57_01925 PF01996 F420-0:Gamma-glutamyl ligase AVL57_01925 PF00881 Nitroreductase family AVL57_01940 PF04055 Radical SAM superfamily AVL57_01945 PF04055 Radical SAM superfamily AVL57_01950 PF08362 YcdC-like protein, C-terminal region AVL57_01950 PF00440 Bacterial regulatory proteins, tetR family AVL57_01955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_01955 PF03466 LysR substrate binding domain AVL57_01960 PF00202 Aminotransferase class-III AVL57_01965 PF00171 Aldehyde dehydrogenase family AVL57_01970 PF07687 Peptidase dimerisation domain AVL57_01970 PF01546 Peptidase family M20/M25/M40 AVL57_01975 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AVL57_01980 PF01979 Amidohydrolase family AVL57_01985 PF07219 HemY protein N-terminus AVL57_01985 PF07719 Tetratricopeptide repeat AVL57_01990 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AVL57_02000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AVL57_02000 PF03900 Porphobilinogen deaminase, C-terminal domain AVL57_02005 PF00072 Response regulator receiver domain AVL57_02005 PF00990 Diguanylate cyclase, GGDEF domain AVL57_02015 PF00625 Guanylate kinase AVL57_02020 PF01192 RNA polymerase Rpb6 AVL57_02025 PF02824 TGS domain AVL57_02025 PF13291 ACT domain AVL57_02025 PF04607 Region found in RelA / SpoT proteins AVL57_02030 PF01042 Endoribonuclease L-PSP AVL57_02035 PF00588 SpoU rRNA Methylase family AVL57_02035 PF12105 SpoU, rRNA methylase, C-terminal AVL57_02040 PF00271 Helicase conserved C-terminal domain AVL57_02040 PF17191 RecG wedge domain AVL57_02040 PF00270 DEAD/DEAH box helicase AVL57_02045 PF04445 Putative SAM-dependent methyltransferase AVL57_02050 PF08534 Redoxin AVL57_02050 PF00462 Glutaredoxin AVL57_02070 PF00528 Binding-protein-dependent transport system inner membrane component AVL57_02075 PF00005 ABC transporter AVL57_02075 PF08402 TOBE domain AVL57_02085 PF00924 Mechanosensitive ion channel AVL57_02085 PF05552 Conserved TM helix AVL57_02110 PF13426 PAS domain AVL57_02110 PF08448 PAS fold AVL57_02110 PF08447 PAS fold AVL57_02110 PF05231 MASE1 AVL57_02110 PF00563 EAL domain AVL57_02110 PF00990 Diguanylate cyclase, GGDEF domain AVL57_02120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_02120 PF03466 LysR substrate binding domain AVL57_02125 PF01810 LysE type translocator AVL57_02130 PF00893 Small Multidrug Resistance protein AVL57_02145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL57_02145 PF00529 HlyD membrane-fusion protein of T1SS AVL57_02150 PF00873 AcrB/AcrD/AcrF family AVL57_02160 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AVL57_02160 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AVL57_02165 PF00850 Histone deacetylase domain AVL57_02175 PF12729 Four helix bundle sensory module for signal transduction AVL57_02175 PF00672 HAMP domain AVL57_02175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_02180 PF01544 CorA-like Mg2+ transporter protein AVL57_02185 PF11737 Protein of unknown function (DUF3300) AVL57_02190 PF00925 GTP cyclohydrolase II AVL57_02195 PF00563 EAL domain AVL57_02195 PF00990 Diguanylate cyclase, GGDEF domain AVL57_02195 PF08448 PAS fold AVL57_02205 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVL57_02215 PF09382 RQC domain AVL57_02215 PF16124 RecQ zinc-binding AVL57_02215 PF00570 HRDC domain AVL57_02215 PF00271 Helicase conserved C-terminal domain AVL57_02215 PF00270 DEAD/DEAH box helicase AVL57_02220 PF03061 Thioesterase superfamily AVL57_02225 PF01769 Divalent cation transporter AVL57_02225 PF03448 MgtE intracellular N domain AVL57_02225 PF00571 CBS domain AVL57_02230 PF00892 EamA-like transporter family AVL57_02235 PF00990 Diguanylate cyclase, GGDEF domain AVL57_02235 PF00072 Response regulator receiver domain AVL57_02240 PF13361 UvrD-like helicase C-terminal domain AVL57_02240 PF00580 UvrD/REP helicase N-terminal domain AVL57_02245 PF06426 Serine acetyltransferase, N-terminal AVL57_02245 PF00132 Bacterial transferase hexapeptide (six repeats) AVL57_02250 PF13419 Haloacid dehalogenase-like hydrolase AVL57_02255 PF00589 Phage integrase family AVL57_02255 PF02899 Phage integrase, N-terminal SAM-like domain AVL57_02265 PF01678 Diaminopimelate epimerase AVL57_02270 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVL57_02270 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVL57_02285 PF01569 PAP2 superfamily AVL57_02290 PF03737 Aldolase/RraA AVL57_02300 PF02441 Flavoprotein AVL57_02305 PF01225 Mur ligase family, catalytic domain AVL57_02305 PF02875 Mur ligase family, glutamate ligase domain AVL57_02305 PF08245 Mur ligase middle domain AVL57_02310 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AVL57_02315 PF00719 Inorganic pyrophosphatase AVL57_02340 PF17760 UvrA interaction domain AVL57_02340 PF00005 ABC transporter AVL57_02340 PF17755 UvrA DNA-binding domain AVL57_02345 PF07690 Major Facilitator Superfamily AVL57_02350 PF13419 Haloacid dehalogenase-like hydrolase AVL57_02360 PF00356 Bacterial regulatory proteins, lacI family AVL57_02370 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AVL57_02370 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AVL57_02375 PF08544 GHMP kinases C terminal AVL57_02375 PF10509 Galactokinase galactose-binding signature AVL57_02375 PF00288 GHMP kinases N terminal domain AVL57_02380 PF00474 Sodium:solute symporter family AVL57_02385 PF00436 Single-strand binding protein family AVL57_02405 PF00975 Thioesterase domain AVL57_02410 PF00873 AcrB/AcrD/AcrF family AVL57_02425 PF00486 Transcriptional regulatory protein, C terminal AVL57_02435 PF00501 AMP-binding enzyme AVL57_02435 PF00975 Thioesterase domain AVL57_02435 PF00550 Phosphopantetheine attachment site AVL57_02435 PF00668 Condensation domain AVL57_02435 PF13193 AMP-binding enzyme C-terminal domain AVL57_02440 PF07993 Male sterility protein AVL57_02440 PF00501 AMP-binding enzyme AVL57_02440 PF13193 AMP-binding enzyme C-terminal domain AVL57_02440 PF00668 Condensation domain AVL57_02440 PF00550 Phosphopantetheine attachment site AVL57_02445 PF00501 AMP-binding enzyme AVL57_02445 PF13193 AMP-binding enzyme C-terminal domain AVL57_02445 PF00668 Condensation domain AVL57_02445 PF00550 Phosphopantetheine attachment site AVL57_02445 PF00975 Thioesterase domain AVL57_02450 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVL57_02455 PF00005 ABC transporter AVL57_02470 PF00486 Transcriptional regulatory protein, C terminal AVL57_02470 PF00072 Response regulator receiver domain AVL57_02475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_02475 PF00512 His Kinase A (phospho-acceptor) domain AVL57_02475 PF09456 RcsC Alpha-Beta-Loop (ABL) AVL57_02475 PF00072 Response regulator receiver domain AVL57_02480 PF08668 HDOD domain AVL57_02480 PF00563 EAL domain AVL57_02485 PF00701 Dihydrodipicolinate synthetase family AVL57_02505 PF16875 Glycosyl hydrolase family 36 N-terminal domain AVL57_02505 PF16874 Glycosyl hydrolase family 36 C-terminal domain AVL57_02510 PF00474 Sodium:solute symporter family AVL57_02530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVL57_02530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVL57_02535 PF00455 DeoR C terminal sensor domain AVL57_02535 PF08220 DeoR-like helix-turn-helix domain AVL57_02540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVL57_02540 PF01266 FAD dependent oxidoreductase AVL57_02570 PF00263 Bacterial type II and III secretion system protein AVL57_02570 PF03958 Bacterial type II/III secretion system short domain AVL57_02575 PF01471 Putative peptidoglycan binding domain AVL57_02575 PF13401 AAA domain AVL57_02585 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AVL57_02585 PF00437 Type II/IV secretion system protein AVL57_02590 PF00482 Type II secretion system (T2SS), protein F AVL57_02600 PF07963 Prokaryotic N-terminal methylation motif AVL57_02600 PF00114 Pilin (bacterial filament) AVL57_02605 PF07963 Prokaryotic N-terminal methylation motif AVL57_02605 PF00114 Pilin (bacterial filament) AVL57_02635 PF04085 rod shape-determining protein MreC AVL57_02640 PF04093 rod shape-determining protein MreD AVL57_02645 PF02545 Maf-like protein AVL57_02650 PF10150 Ribonuclease E/G family AVL57_02650 PF00575 S1 RNA binding domain AVL57_02660 PF00795 Carbon-nitrogen hydrolase AVL57_02665 PF01523 Putative modulator of DNA gyrase AVL57_02675 PF04751 Protein of unknown function (DUF615) AVL57_02680 PF01523 Putative modulator of DNA gyrase AVL57_02690 PF00703 Glycosyl hydrolases family 2 AVL57_02690 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AVL57_02690 PF02837 Glycosyl hydrolases family 2, sugar binding domain AVL57_02690 PF16353 Domain of unknown function(DUF4981) AVL57_02690 PF02929 Beta galactosidase small chain AVL57_02695 PF00072 Response regulator receiver domain AVL57_02695 PF00486 Transcriptional regulatory protein, C terminal AVL57_02700 PF00512 His Kinase A (phospho-acceptor) domain AVL57_02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_02700 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVL57_02705 PF00534 Glycosyl transferases group 1 AVL57_02705 PF08323 Starch synthase catalytic domain AVL57_02710 PF08468 Methyltransferase small domain N-terminal AVL57_02710 PF05175 Methyltransferase small domain AVL57_02715 PF02390 Putative methyltransferase AVL57_02725 PF10576 Iron-sulfur binding domain of endonuclease III AVL57_02725 PF00730 HhH-GPD superfamily base excision DNA repair protein AVL57_02725 PF14815 NUDIX domain AVL57_02725 PF00633 Helix-hairpin-helix motif AVL57_02730 PF04362 Bacterial Fe(2+) trafficking AVL57_02765 PF00072 Response regulator receiver domain AVL57_02765 PF00486 Transcriptional regulatory protein, C terminal AVL57_02775 PF17200 Single Cache domain 2 AVL57_02775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_02775 PF00672 HAMP domain AVL57_02780 PF00072 Response regulator receiver domain AVL57_02785 PF09078 CheY binding AVL57_02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_02785 PF01627 Hpt domain AVL57_02785 PF01584 CheW-like domain AVL57_02785 PF02895 Signal transducing histidine kinase, homodimeric domain AVL57_02790 PF01584 CheW-like domain AVL57_02795 PF13426 PAS domain AVL57_02795 PF08447 PAS fold AVL57_02795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_02800 PF01739 CheR methyltransferase, SAM binding domain AVL57_02800 PF03705 CheR methyltransferase, all-alpha domain AVL57_02805 PF03975 CheD chemotactic sensory transduction AVL57_02810 PF01339 CheB methylesterase AVL57_02810 PF00072 Response regulator receiver domain AVL57_02825 PF01435 Peptidase family M48 AVL57_02840 PF00356 Bacterial regulatory proteins, lacI family AVL57_02840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AVL57_02850 PF01204 Trehalase AVL57_02860 PF13419 Haloacid dehalogenase-like hydrolase AVL57_02865 PF00512 His Kinase A (phospho-acceptor) domain AVL57_02865 PF13426 PAS domain AVL57_02865 PF08448 PAS fold AVL57_02865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_02865 PF00072 Response regulator receiver domain AVL57_02890 PF00356 Bacterial regulatory proteins, lacI family AVL57_02895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVL57_02895 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVL57_02905 PF03825 Nucleoside H+ symporter AVL57_02915 PF00732 GMC oxidoreductase AVL57_02915 PF05199 GMC oxidoreductase AVL57_02955 PF00465 Iron-containing alcohol dehydrogenase AVL57_02960 PF00300 Histidine phosphatase superfamily (branch 1) AVL57_02965 PF00330 Aconitase family (aconitate hydratase) AVL57_02965 PF00694 Aconitase C-terminal domain AVL57_02975 PF00437 Type II/IV secretion system protein AVL57_02980 PF00338 Ribosomal protein S10p/S20e AVL57_02985 PF00297 Ribosomal protein L3 AVL57_02990 PF00573 Ribosomal protein L4/L1 family AVL57_02995 PF00276 Ribosomal protein L23 AVL57_03000 PF03947 Ribosomal Proteins L2, C-terminal domain AVL57_03000 PF00181 Ribosomal Proteins L2, RNA binding domain AVL57_03005 PF00203 Ribosomal protein S19 AVL57_03010 PF00237 Ribosomal protein L22p/L17e AVL57_03015 PF07650 KH domain AVL57_03015 PF00189 Ribosomal protein S3, C-terminal domain AVL57_03020 PF00252 Ribosomal protein L16p/L10e AVL57_03025 PF00831 Ribosomal L29 protein AVL57_03030 PF00366 Ribosomal protein S17 AVL57_03035 PF00534 Glycosyl transferases group 1 AVL57_03035 PF13439 Glycosyltransferase Family 4 AVL57_03040 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AVL57_03045 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AVL57_03045 PF00534 Glycosyl transferases group 1 AVL57_03065 PF00672 HAMP domain AVL57_03065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_03065 PF02743 Cache domain AVL57_03070 PF01432 Peptidase family M3 AVL57_03080 PF01842 ACT domain AVL57_03080 PF00551 Formyl transferase AVL57_03090 PF00270 DEAD/DEAH box helicase AVL57_03090 PF00271 Helicase conserved C-terminal domain AVL57_03090 PF04408 Helicase associated domain (HA2) AVL57_03090 PF08482 ATP-dependent helicase C-terminal AVL57_03095 PF13406 Transglycosylase SLT domain AVL57_03105 PF14814 Bifunctional transglycosylase second domain AVL57_03105 PF00912 Transglycosylase AVL57_03105 PF00905 Penicillin binding protein transpeptidase domain AVL57_03115 PF05661 Protein of unknown function (DUF808) AVL57_03135 PF00543 Nitrogen regulatory protein P-II AVL57_03140 PF00909 Ammonium Transporter Family AVL57_03150 PF04261 Dyp-type peroxidase family AVL57_03155 PF00211 Adenylate and Guanylate cyclase catalytic domain AVL57_03155 PF00672 HAMP domain AVL57_03160 PF00202 Aminotransferase class-III AVL57_03165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVL57_03165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVL57_03170 PF00440 Bacterial regulatory proteins, tetR family AVL57_03180 PF00873 AcrB/AcrD/AcrF family AVL57_03190 PF00072 Response regulator receiver domain AVL57_03190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL57_03190 PF00512 His Kinase A (phospho-acceptor) domain AVL57_03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_03190 PF00672 HAMP domain AVL57_03190 PF01627 Hpt domain AVL57_03195 PF00521 DNA gyrase/topoisomerase IV, subunit A AVL57_03195 PF03989 DNA gyrase C-terminal domain, beta-propeller AVL57_03205 PF00990 Diguanylate cyclase, GGDEF domain AVL57_03205 PF03707 Bacterial signalling protein N terminal repeat AVL57_03205 PF00563 EAL domain AVL57_03215 PF00171 Aldehyde dehydrogenase family AVL57_03220 PF04958 Arginine N-succinyltransferase beta subunit AVL57_03225 PF00202 Aminotransferase class-III AVL57_03235 PF00117 Glutamine amidotransferase class-I AVL57_03240 PF00579 tRNA synthetases class I (W and Y) AVL57_03245 PF00834 Ribulose-phosphate 3 epimerase family AVL57_03265 PF02086 D12 class N6 adenine-specific DNA methyltransferase AVL57_03275 PF01761 3-dehydroquinate synthase AVL57_03280 PF01202 Shikimate kinase AVL57_03285 PF07660 Secretin and TonB N terminus short domain AVL57_03285 PF00263 Bacterial type II and III secretion system protein AVL57_03285 PF11741 AMIN domain AVL57_03285 PF03958 Bacterial type II/III secretion system short domain AVL57_03310 PF00905 Penicillin binding protein transpeptidase domain AVL57_03310 PF00912 Transglycosylase AVL57_03310 PF17092 Penicillin-binding protein OB-like domain AVL57_03315 PF00390 Malic enzyme, N-terminal domain AVL57_03315 PF03949 Malic enzyme, NAD binding domain AVL57_03320 PF02798 Glutathione S-transferase, N-terminal domain AVL57_03355 PF00990 Diguanylate cyclase, GGDEF domain AVL57_03355 PF00563 EAL domain AVL57_03355 PF03707 Bacterial signalling protein N terminal repeat AVL57_03360 PF00696 Amino acid kinase family AVL57_03360 PF00583 Acetyltransferase (GNAT) family AVL57_03365 PF14698 Argininosuccinate lyase C-terminal AVL57_03365 PF00206 Lyase AVL57_03370 PF00764 Arginosuccinate synthase AVL57_03375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVL57_03375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVL57_03380 PF00696 Amino acid kinase family AVL57_03385 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVL57_03385 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVL57_03390 PF02142 MGS-like domain AVL57_03400 PF02107 Flagellar L-ring protein AVL57_03415 PF00072 Response regulator receiver domain AVL57_03415 PF00486 Transcriptional regulatory protein, C terminal AVL57_03420 PF00512 His Kinase A (phospho-acceptor) domain AVL57_03420 PF16527 Two-component sensor protein CpxA, periplasmic domain AVL57_03420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_03420 PF00672 HAMP domain AVL57_03425 PF12146 Serine aminopeptidase, S33 AVL57_03430 PF00588 SpoU rRNA Methylase family AVL57_03435 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVL57_03435 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVL57_03440 PF02556 Preprotein translocase subunit SecB AVL57_03445 PF00462 Glutaredoxin AVL57_03455 PF01551 Peptidase family M23 AVL57_03465 PF04748 Divergent polysaccharide deacetylase AVL57_03475 PF03009 Glycerophosphoryl diester phosphodiesterase family AVL57_03485 PF02666 Phosphatidylserine decarboxylase AVL57_03490 PF03193 RsgA GTPase AVL57_03495 PF00929 Exonuclease AVL57_03510 PF00593 TonB dependent receptor AVL57_03510 PF07715 TonB-dependent Receptor Plug Domain AVL57_03515 PF13181 Tetratricopeptide repeat AVL57_03530 PF00205 Thiamine pyrophosphate enzyme, central domain AVL57_03530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVL57_03530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVL57_03535 PF10369 Small subunit of acetolactate synthase AVL57_03545 PF02416 mttA/Hcf106 family AVL57_03550 PF02416 mttA/Hcf106 family AVL57_03555 PF00902 Sec-independent protein translocase protein (TatC) AVL57_03565 PF01026 TatD related DNase AVL57_03570 PF07694 5TMR of 5TMR-LYT AVL57_03570 PF00990 Diguanylate cyclase, GGDEF domain AVL57_03575 PF00490 Delta-aminolevulinic acid dehydratase AVL57_03580 PF02541 Ppx/GppA phosphatase family AVL57_03585 PF00271 Helicase conserved C-terminal domain AVL57_03585 PF00270 DEAD/DEAH box helicase AVL57_03590 PF00085 Thioredoxin AVL57_03595 PF07497 Rho termination factor, RNA-binding domain AVL57_03595 PF07498 Rho termination factor, N-terminal domain AVL57_03595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVL57_03605 PF00512 His Kinase A (phospho-acceptor) domain AVL57_03605 PF09308 LuxQ, periplasmic AVL57_03605 PF00072 Response regulator receiver domain AVL57_03605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_03610 PF06965 Na+/H+ antiporter 1 AVL57_03615 PF00731 AIR carboxylase AVL57_03620 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AVL57_03620 PF02222 ATP-grasp domain AVL57_03635 PF00210 Ferritin-like domain AVL57_03640 PF07995 Glucose / Sorbosone dehydrogenase AVL57_03650 PF00085 Thioredoxin AVL57_03660 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AVL57_03665 PF00709 Adenylosuccinate synthetase AVL57_03670 PF00171 Aldehyde dehydrogenase family AVL57_03690 PF03553 Na+/H+ antiporter family AVL57_03695 PF00933 Glycosyl hydrolase family 3 N terminal domain AVL57_03710 PF07075 Protein of unknown function (DUF1343) AVL57_03715 PF01380 SIS domain AVL57_03720 PF00842 Alanine racemase, C-terminal domain AVL57_03720 PF01168 Alanine racemase, N-terminal domain AVL57_03735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVL57_03765 PF00583 Acetyltransferase (GNAT) family AVL57_03775 PF03358 NADPH-dependent FMN reductase AVL57_03800 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AVL57_03805 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AVL57_03915 PF13495 Phage integrase, N-terminal SAM-like domain AVL57_03915 PF00589 Phage integrase family AVL57_03920 PF00108 Thiolase, N-terminal domain AVL57_03920 PF02803 Thiolase, C-terminal domain AVL57_03925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVL57_03925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVL57_03925 PF00378 Enoyl-CoA hydratase/isomerase AVL57_03930 PF14718 Soluble lytic murein transglycosylase L domain AVL57_03930 PF01464 Transglycosylase SLT domain AVL57_03935 PF00557 Metallopeptidase family M24 AVL57_03945 PF00348 Polyprenyl synthetase AVL57_03950 PF00829 Ribosomal prokaryotic L21 protein AVL57_03955 PF01016 Ribosomal L27 protein AVL57_03960 PF01018 GTP1/OBG AVL57_03960 PF01926 50S ribosome-binding GTPase AVL57_03970 PF09055 Nickel-containing superoxide dismutase AVL57_03990 PF00186 Dihydrofolate reductase AVL57_03995 PF04539 Sigma-70 region 3 AVL57_03995 PF00140 Sigma-70 factor, region 1.2 AVL57_03995 PF04542 Sigma-70 region 2 AVL57_03995 PF04545 Sigma-70, region 4 AVL57_04000 PF01551 Peptidase family M23 AVL57_04000 PF01476 LysM domain AVL57_04005 PF09335 SNARE associated Golgi protein AVL57_04015 PF01975 Survival protein SurE AVL57_04020 PF01142 tRNA pseudouridine synthase D (TruD) AVL57_04025 PF02542 YgbB family AVL57_04030 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVL57_04035 PF04977 Septum formation initiator AVL57_04045 PF17200 Single Cache domain 2 AVL57_04045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_04045 PF00672 HAMP domain AVL57_04050 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AVL57_04050 PF14850 DNA-binding domain of Proline dehydrogenase AVL57_04050 PF01619 Proline dehydrogenase AVL57_04050 PF00171 Aldehyde dehydrogenase family AVL57_04055 PF02321 Outer membrane efflux protein AVL57_04060 PF13533 Biotin-lipoyl like AVL57_04065 PF00873 AcrB/AcrD/AcrF family AVL57_04070 PF00072 Response regulator receiver domain AVL57_04070 PF00486 Transcriptional regulatory protein, C terminal AVL57_04075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_04075 PF00672 HAMP domain AVL57_04075 PF00512 His Kinase A (phospho-acceptor) domain AVL57_04080 PF08239 Bacterial SH3 domain AVL57_04085 PF01928 CYTH domain AVL57_04095 PF02976 DNA mismatch repair enzyme MutH AVL57_04100 PF00293 NUDIX domain AVL57_04105 PF00391 PEP-utilising enzyme, mobile domain AVL57_04105 PF02896 PEP-utilising enzyme, TIM barrel domain AVL57_04105 PF01590 GAF domain AVL57_04105 PF05524 PEP-utilising enzyme, N-terminal AVL57_04110 PF01925 Sulfite exporter TauE/SafE AVL57_04115 PF01790 Prolipoprotein diacylglyceryl transferase AVL57_04120 PF00303 Thymidylate synthase AVL57_04125 PF01339 CheB methylesterase AVL57_04125 PF00072 Response regulator receiver domain AVL57_04130 PF05230 MASE2 domain AVL57_04130 PF00990 Diguanylate cyclase, GGDEF domain AVL57_04135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_04135 PF00072 Response regulator receiver domain AVL57_04135 PF00512 His Kinase A (phospho-acceptor) domain AVL57_04135 PF09308 LuxQ, periplasmic AVL57_04140 PF07690 Major Facilitator Superfamily AVL57_04155 PF00849 RNA pseudouridylate synthase AVL57_04160 PF18337 RapA N-terminal Tudor like domain AVL57_04160 PF18339 RapA N-terminal Tudor like domain 1 AVL57_04160 PF12137 RNA polymerase recycling family C-terminal AVL57_04160 PF00271 Helicase conserved C-terminal domain AVL57_04160 PF00176 SNF2 family N-terminal domain AVL57_04165 PF13638 PIN domain AVL57_04165 PF02562 PhoH-like protein AVL57_04175 PF00392 Bacterial regulatory proteins, gntR family AVL57_04175 PF07729 FCD domain AVL57_04180 PF00884 Sulfatase AVL57_04180 PF16347 Domain of unknown function (DUF4976) AVL57_04185 PF00171 Aldehyde dehydrogenase family AVL57_04195 PF00107 Zinc-binding dehydrogenase AVL57_04195 PF08240 Alcohol dehydrogenase GroES-like domain AVL57_04200 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVL57_04200 PF13378 Enolase C-terminal domain-like AVL57_04205 PF00083 Sugar (and other) transporter AVL57_04225 PF00067 Cytochrome P450 AVL57_04230 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL57_04235 PF14759 Reductase C-terminal AVL57_04235 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_04270 PF17992 Agarase CBM like domain AVL57_04270 PF02449 Beta-galactosidase AVL57_04280 PF00722 Glycosyl hydrolases family 16 AVL57_04290 PF02449 Beta-galactosidase AVL57_04290 PF17992 Agarase CBM like domain AVL57_04295 PF00884 Sulfatase AVL57_04325 PF16385 Domain of unknown function AVL57_04325 PF00884 Sulfatase AVL57_04330 PF07715 TonB-dependent Receptor Plug Domain AVL57_04330 PF00593 TonB dependent receptor AVL57_04355 PF18206 Porphyranase catalytic subdomain 1 AVL57_04360 PF16347 Domain of unknown function (DUF4976) AVL57_04360 PF00884 Sulfatase AVL57_04365 PF00884 Sulfatase AVL57_04375 PF10414 Sirohaem synthase dimerisation region AVL57_04375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVL57_04380 PF12343 Cold shock protein DEAD box A AVL57_04380 PF00270 DEAD/DEAH box helicase AVL57_04380 PF00271 Helicase conserved C-terminal domain AVL57_04380 PF03880 DbpA RNA binding domain AVL57_04395 PF02321 Outer membrane efflux protein AVL57_04400 PF00293 NUDIX domain AVL57_04415 PF05728 Uncharacterised protein family (UPF0227) AVL57_04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_04420 PF01751 Toprim domain AVL57_04420 PF00986 DNA gyrase B subunit, carboxyl terminus AVL57_04420 PF00204 DNA gyrase B AVL57_04425 PF00563 EAL domain AVL57_04425 PF00990 Diguanylate cyclase, GGDEF domain AVL57_04425 PF03707 Bacterial signalling protein N terminal repeat AVL57_04430 PF01590 GAF domain AVL57_04430 PF00360 Phytochrome region AVL57_04430 PF08446 PAS fold AVL57_04430 PF00512 His Kinase A (phospho-acceptor) domain AVL57_04430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_04435 PF13419 Haloacid dehalogenase-like hydrolase AVL57_04455 PF04055 Radical SAM superfamily AVL57_04465 PF00152 tRNA synthetases class II (D, K and N) AVL57_04470 PF07715 TonB-dependent Receptor Plug Domain AVL57_04470 PF00593 TonB dependent receptor AVL57_04485 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVL57_04490 PF05175 Methyltransferase small domain AVL57_04500 PF01722 BolA-like protein AVL57_04505 PF01569 PAP2 superfamily AVL57_04515 PF03861 ANTAR domain AVL57_04515 PF08376 Nitrate and nitrite sensing AVL57_04525 PF01740 STAS domain AVL57_04525 PF00916 Sulfate permease family AVL57_04530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVL57_04530 PF18267 Rubredoxin NAD+ reductase C-terminal domain AVL57_04530 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_04530 PF04324 BFD-like [2Fe-2S] binding domain AVL57_04530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVL57_04535 PF13806 Rieske-like [2Fe-2S] domain AVL57_04540 PF00384 Molybdopterin oxidoreductase AVL57_04540 PF04324 BFD-like [2Fe-2S] binding domain AVL57_04540 PF01568 Molydopterin dinucleotide binding domain AVL57_04540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVL57_04545 PF10414 Sirohaem synthase dimerisation region AVL57_04545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVL57_04545 PF14824 Sirohaem biosynthesis protein central AVL57_04550 PF02885 Glycosyl transferase family, helical bundle domain AVL57_04550 PF00591 Glycosyl transferase family, a/b domain AVL57_04555 PF08447 PAS fold AVL57_04555 PF13426 PAS domain AVL57_04555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_04560 PF00005 ABC transporter AVL57_04565 PF00528 Binding-protein-dependent transport system inner membrane component AVL57_04570 PF00005 ABC transporter AVL57_04585 PF01323 DSBA-like thioredoxin domain AVL57_04590 PF00593 TonB dependent receptor AVL57_04590 PF07715 TonB-dependent Receptor Plug Domain AVL57_04595 PF01636 Phosphotransferase enzyme family AVL57_04600 PF13746 4Fe-4S dicluster domain AVL57_04600 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AVL57_04600 PF12801 4Fe-4S binding domain AVL57_04615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL57_04615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL57_04615 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVL57_04615 PF02770 Acyl-CoA dehydrogenase, middle domain AVL57_04640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVL57_04640 PF13378 Enolase C-terminal domain-like AVL57_04645 PF00596 Class II Aldolase and Adducin N-terminal domain AVL57_04650 PF00293 NUDIX domain AVL57_04655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL57_04660 PF00873 AcrB/AcrD/AcrF family AVL57_04675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_04675 PF00672 HAMP domain AVL57_04675 PF02743 Cache domain AVL57_04680 PF04545 Sigma-70, region 4 AVL57_04680 PF04539 Sigma-70 region 3 AVL57_04680 PF03979 Sigma-70 factor, region 1.1 AVL57_04680 PF04546 Sigma-70, non-essential region AVL57_04680 PF04542 Sigma-70 region 2 AVL57_04680 PF00140 Sigma-70 factor, region 1.2 AVL57_04685 PF01807 CHC2 zinc finger AVL57_04685 PF10410 DnaB-helicase binding domain of primase AVL57_04685 PF08278 DNA primase DnaG DnaB-binding AVL57_04685 PF08275 DNA primase catalytic core, N-terminal domain AVL57_04690 PF09424 Yqey-like protein AVL57_04695 PF01165 Ribosomal protein S21 AVL57_04700 PF00814 Glycoprotease family AVL57_04710 PF02660 Glycerol-3-phosphate acyltransferase AVL57_04715 PF02152 Dihydroneopterin aldolase AVL57_04725 PF02673 Bacitracin resistance protein BacA AVL57_04730 PF01230 HIT domain AVL57_04745 PF03594 Benzoate membrane transport protein AVL57_04750 PF07883 Cupin domain AVL57_04750 PF01381 Helix-turn-helix AVL57_04755 PF04381 Putative exonuclease, RdgC AVL57_04760 PF00512 His Kinase A (phospho-acceptor) domain AVL57_04760 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVL57_04760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_04765 PF00072 Response regulator receiver domain AVL57_04765 PF00486 Transcriptional regulatory protein, C terminal AVL57_04770 PF00989 PAS fold AVL57_04770 PF11808 Phosphate regulon sensor protein PhoR AVL57_04770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_04770 PF00512 His Kinase A (phospho-acceptor) domain AVL57_04775 PF12849 PBP superfamily domain AVL57_04800 PF01618 MotA/TolQ/ExbB proton channel family AVL57_04805 PF01618 MotA/TolQ/ExbB proton channel family AVL57_04810 PF02472 Biopolymer transport protein ExbD/TolR AVL57_04815 PF03544 Gram-negative bacterial TonB protein C-terminal AVL57_04825 PF09411 Lipid A 3-O-deacylase (PagL) AVL57_04830 PF00072 Response regulator receiver domain AVL57_04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_04835 PF00672 HAMP domain AVL57_04835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL57_04835 PF00072 Response regulator receiver domain AVL57_04835 PF01627 Hpt domain AVL57_04835 PF00512 His Kinase A (phospho-acceptor) domain AVL57_04840 PF13193 AMP-binding enzyme C-terminal domain AVL57_04840 PF00501 AMP-binding enzyme AVL57_04850 PF07995 Glucose / Sorbosone dehydrogenase AVL57_04855 PF00330 Aconitase family (aconitate hydratase) AVL57_04855 PF06434 Aconitate hydratase 2 N-terminus AVL57_04855 PF11791 Aconitate B N-terminal domain AVL57_04865 PF11791 Aconitate B N-terminal domain AVL57_04865 PF06434 Aconitate hydratase 2 N-terminus AVL57_04865 PF00330 Aconitase family (aconitate hydratase) AVL57_04875 PF01842 ACT domain AVL57_04875 PF00696 Amino acid kinase family AVL57_04880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_04880 PF00672 HAMP domain AVL57_04885 PF00149 Calcineurin-like phosphoesterase AVL57_04890 PF04379 ApaG domain AVL57_04895 PF00398 Ribosomal RNA adenine dimethylase AVL57_04900 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AVL57_04905 PF00639 PPIC-type PPIASE domain AVL57_04905 PF09312 SurA N-terminal domain AVL57_04910 PF04453 LPS transport system D AVL57_04910 PF03968 OstA-like protein AVL57_04915 PF05099 Tellurite resistance protein TerB AVL57_04915 PF00226 DnaJ domain AVL57_04920 PF02899 Phage integrase, N-terminal SAM-like domain AVL57_04920 PF00589 Phage integrase family AVL57_04925 PF13098 Thioredoxin-like domain AVL57_04925 PF10411 Disulfide bond isomerase protein N-terminus AVL57_04930 PF17768 RecJ OB domain AVL57_04930 PF01368 DHH family AVL57_04930 PF02272 DHHA1 domain AVL57_04940 PF02565 Recombination protein O C terminal AVL57_04940 PF11967 Recombination protein O N terminal AVL57_04945 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AVL57_04950 PF01648 4'-phosphopantetheinyl transferase superfamily AVL57_04955 PF05958 tRNA (Uracil-5-)-methyltransferase AVL57_04960 PF13291 ACT domain AVL57_04960 PF04607 Region found in RelA / SpoT proteins AVL57_04960 PF02824 TGS domain AVL57_04965 PF03819 MazG nucleotide pyrophosphohydrolase domain AVL57_04980 PF00572 Ribosomal protein L13 AVL57_04985 PF00380 Ribosomal protein S9/S16 AVL57_04990 PF04542 Sigma-70 region 2 AVL57_04990 PF08281 Sigma-70, region 4 AVL57_05000 PF00593 TonB dependent receptor AVL57_05000 PF07715 TonB-dependent Receptor Plug Domain AVL57_05010 PF01546 Peptidase family M20/M25/M40 AVL57_05015 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AVL57_05015 PF00355 Rieske [2Fe-2S] domain AVL57_05020 PF00033 Cytochrome b/b6/petB AVL57_05020 PF00032 Cytochrome b(C-terminal)/b6/petD AVL57_05025 PF02167 Cytochrome C1 family AVL57_05030 PF02798 Glutathione S-transferase, N-terminal domain AVL57_05030 PF00043 Glutathione S-transferase, C-terminal domain AVL57_05035 PF04386 Stringent starvation protein B AVL57_05040 PF09334 tRNA synthetases class I (M) AVL57_05040 PF08264 Anticodon-binding domain of tRNA AVL57_05040 PF01588 Putative tRNA binding domain AVL57_05045 PF12833 Helix-turn-helix domain AVL57_05055 PF01769 Divalent cation transporter AVL57_05055 PF00571 CBS domain AVL57_05055 PF03448 MgtE intracellular N domain AVL57_05060 PF00381 PTS HPr component phosphorylation site AVL57_05065 PF03668 P-loop ATPase protein family AVL57_05070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVL57_05075 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVL57_05085 PF00005 ABC transporter AVL57_05085 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVL57_05105 PF01380 SIS domain AVL57_05105 PF00571 CBS domain AVL57_05110 PF01699 Sodium/calcium exchanger protein AVL57_05115 PF00005 ABC transporter AVL57_05120 PF02405 Permease MlaE AVL57_05125 PF02470 MlaD protein AVL57_05130 PF05494 MlaC protein AVL57_05140 PF01722 BolA-like protein AVL57_05145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVL57_05150 PF13180 PDZ domain AVL57_05155 PF00595 PDZ domain AVL57_05155 PF13180 PDZ domain AVL57_05165 PF03969 AFG1-like ATPase AVL57_05170 PF01709 Transcriptional regulator AVL57_05180 PF12833 Helix-turn-helix domain AVL57_05195 PF02355 Protein export membrane protein AVL57_05195 PF07549 SecD/SecF GG Motif AVL57_05200 PF03471 Transporter associated domain AVL57_05200 PF00999 Sodium/hydrogen exchanger family AVL57_05200 PF02080 TrkA-C domain AVL57_05210 PF03707 Bacterial signalling protein N terminal repeat AVL57_05210 PF00563 EAL domain AVL57_05210 PF00990 Diguanylate cyclase, GGDEF domain AVL57_05210 PF13188 PAS domain AVL57_05215 PF00072 Response regulator receiver domain AVL57_05215 PF09308 LuxQ, periplasmic AVL57_05215 PF00512 His Kinase A (phospho-acceptor) domain AVL57_05215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_05225 PF12833 Helix-turn-helix domain AVL57_05225 PF06719 AraC-type transcriptional regulator N-terminus AVL57_05230 PF00465 Iron-containing alcohol dehydrogenase AVL57_05250 PF02772 S-adenosylmethionine synthetase, central domain AVL57_05250 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVL57_05250 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVL57_05255 PF02780 Transketolase, C-terminal domain AVL57_05255 PF02779 Transketolase, pyrimidine binding domain AVL57_05255 PF00456 Transketolase, thiamine diphosphate binding domain AVL57_05260 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVL57_05260 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVL57_05265 PF00162 Phosphoglycerate kinase AVL57_05270 PF00274 Fructose-bisphosphate aldolase class-I AVL57_05275 PF07676 WD40-like Beta Propeller Repeat AVL57_05275 PF00326 Prolyl oligopeptidase family AVL57_05280 PF02541 Ppx/GppA phosphatase family AVL57_05285 PF17941 Polyphosphate kinase C-terminal domain 1 AVL57_05285 PF13089 Polyphosphate kinase N-terminal domain AVL57_05285 PF13090 Polyphosphate kinase C-terminal domain 2 AVL57_05285 PF02503 Polyphosphate kinase middle domain AVL57_05295 PF00528 Binding-protein-dependent transport system inner membrane component AVL57_05300 PF00528 Binding-protein-dependent transport system inner membrane component AVL57_05305 PF00005 ABC transporter AVL57_05310 PF01895 PhoU domain AVL57_05315 PF01384 Phosphate transporter family AVL57_05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_05325 PF03466 LysR substrate binding domain AVL57_05330 PF04542 Sigma-70 region 2 AVL57_05330 PF12680 SnoaL-like domain AVL57_05330 PF08281 Sigma-70, region 4 AVL57_05350 PF03006 Haemolysin-III related AVL57_05355 PF00563 EAL domain AVL57_05355 PF00990 Diguanylate cyclase, GGDEF domain AVL57_05355 PF03707 Bacterial signalling protein N terminal repeat AVL57_05370 PF00083 Sugar (and other) transporter AVL57_05375 PF12833 Helix-turn-helix domain AVL57_05380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVL57_05380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVL57_05390 PF02013 Cellulose or protein binding domain AVL57_05390 PF02927 Cellulase N-terminal ig-like domain AVL57_05390 PF00553 Cellulose binding domain AVL57_05390 PF00759 Glycosyl hydrolase family 9 AVL57_05390 PF00801 PKD domain AVL57_05395 PF12833 Helix-turn-helix domain AVL57_05400 PF04820 Tryptophan halogenase AVL57_05410 PF07691 PA14 domain AVL57_05410 PF01915 Glycosyl hydrolase family 3 C-terminal domain AVL57_05410 PF00933 Glycosyl hydrolase family 3 N terminal domain AVL57_05410 PF14310 Fibronectin type III-like domain AVL57_05415 PF01047 MarR family AVL57_05420 PF02566 OsmC-like protein AVL57_05425 PF01433 Peptidase family M1 domain AVL57_05435 PF01205 Uncharacterized protein family UPF0029 AVL57_05435 PF09186 Domain of unknown function (DUF1949) AVL57_05440 PF08447 PAS fold AVL57_05440 PF13426 PAS domain AVL57_05440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_05445 PF12320 Type 5 capsule protein repressor C-terminal domain AVL57_05445 PF00149 Calcineurin-like phosphoesterase AVL57_05450 PF13476 AAA domain AVL57_05455 PF05230 MASE2 domain AVL57_05455 PF00990 Diguanylate cyclase, GGDEF domain AVL57_05465 PF01869 BadF/BadG/BcrA/BcrD ATPase family AVL57_05470 PF01979 Amidohydrolase family AVL57_05475 PF01734 Patatin-like phospholipase AVL57_05475 PF11856 Protein of unknown function (DUF3376) AVL57_05480 PF00005 ABC transporter AVL57_05480 PF12848 ABC transporter AVL57_05500 PF07715 TonB-dependent Receptor Plug Domain AVL57_05500 PF00593 TonB dependent receptor AVL57_05515 PF01734 Patatin-like phospholipase AVL57_05540 PF00593 TonB dependent receptor AVL57_05545 PF12161 HsdM N-terminal domain AVL57_05545 PF02384 N-6 DNA Methylase AVL57_05615 PF04172 LrgB-like family AVL57_05620 PF00072 Response regulator receiver domain AVL57_05645 PF06969 HemN C-terminal domain AVL57_05645 PF04055 Radical SAM superfamily AVL57_05650 PF01725 Ham1 family AVL57_05655 PF00271 Helicase conserved C-terminal domain AVL57_05655 PF00270 DEAD/DEAH box helicase AVL57_05660 PF12627 Probable RNA and SrmB- binding site of polymerase A AVL57_05660 PF01743 Poly A polymerase head domain AVL57_05665 PF01471 Putative peptidoglycan binding domain AVL57_05665 PF13401 AAA domain AVL57_05675 PF11849 Domain of unknown function (DUF3369) AVL57_05680 PF00694 Aconitase C-terminal domain AVL57_05685 PF00330 Aconitase family (aconitate hydratase) AVL57_05690 PF00180 Isocitrate/isopropylmalate dehydrogenase AVL57_05695 PF08502 LeuA allosteric (dimerisation) domain AVL57_05695 PF00682 HMGL-like AVL57_05700 PF00561 alpha/beta hydrolase fold AVL57_05715 PF00113 Enolase, C-terminal TIM barrel domain AVL57_05715 PF03952 Enolase, N-terminal domain AVL57_05720 PF00117 Glutamine amidotransferase class-I AVL57_05720 PF06418 CTP synthase N-terminus AVL57_05725 PF00488 MutS domain V AVL57_05725 PF05190 MutS family domain IV AVL57_05725 PF05192 MutS domain III AVL57_05725 PF05188 MutS domain II AVL57_05725 PF01624 MutS domain I AVL57_05730 PF02464 Competence-damaged protein AVL57_05735 PF00154 recA bacterial DNA recombination protein AVL57_05740 PF00005 ABC transporter AVL57_05745 PF12679 ABC-2 family transporter protein AVL57_05765 PF00005 ABC transporter AVL57_05770 PF03379 CcmB protein AVL57_05775 PF01578 Cytochrome C assembly protein AVL57_05780 PF04995 Heme exporter protein D (CcmD) AVL57_05785 PF03100 CcmE AVL57_05790 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AVL57_05790 PF01578 Cytochrome C assembly protein AVL57_05795 PF08534 Redoxin AVL57_05800 PF03918 Cytochrome C biogenesis protein AVL57_05810 PF04333 MlaA lipoprotein AVL57_05815 PF16363 GDP-mannose 4,6 dehydratase AVL57_05825 PF00854 POT family AVL57_05835 PF00005 ABC transporter AVL57_05840 PF01061 ABC-2 type transporter AVL57_05845 PF10531 SLBB domain AVL57_05845 PF02563 Polysaccharide biosynthesis/export protein AVL57_05855 PF00953 Glycosyl transferase family 4 AVL57_05860 PF00535 Glycosyl transferase family 2 AVL57_05870 PF00483 Nucleotidyl transferase AVL57_05875 PF10531 SLBB domain AVL57_05880 PF18324 Hypothetical protein TT1725 AVL57_05880 PF00180 Isocitrate/isopropylmalate dehydrogenase AVL57_05895 PF11892 Domain of unknown function (DUF3412) AVL57_05895 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AVL57_05895 PF03641 Possible lysine decarboxylase AVL57_05900 PF00990 Diguanylate cyclase, GGDEF domain AVL57_05900 PF00072 Response regulator receiver domain AVL57_05905 PF14489 QueF-like protein AVL57_05905 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AVL57_05910 PF07348 Syd protein (SUKH-2) AVL57_05935 PF11799 impB/mucB/samB family C-terminal domain AVL57_05935 PF13438 Domain of unknown function (DUF4113) AVL57_05935 PF00817 impB/mucB/samB family AVL57_05940 PF00717 Peptidase S24-like AVL57_05945 PF00326 Prolyl oligopeptidase family AVL57_05975 PF00849 RNA pseudouridylate synthase AVL57_05980 PF00258 Flavodoxin AVL57_05985 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AVL57_05985 PF00132 Bacterial transferase hexapeptide (six repeats) AVL57_05985 PF14602 Hexapeptide repeat of succinyl-transferase AVL57_05995 PF00557 Metallopeptidase family M24 AVL57_06000 PF00318 Ribosomal protein S2 AVL57_06005 PF00889 Elongation factor TS AVL57_06010 PF00696 Amino acid kinase family AVL57_06015 PF01765 Ribosome recycling factor AVL57_06020 PF01255 Putative undecaprenyl diphosphate synthase AVL57_06030 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AVL57_06030 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AVL57_06030 PF13288 DXP reductoisomerase C-terminal domain AVL57_06035 PF02163 Peptidase family M50 AVL57_06035 PF17820 PDZ domain AVL57_06040 PF01103 Surface antigen AVL57_06040 PF07244 Surface antigen variable number repeat AVL57_06050 PF07977 FabA-like domain AVL57_06055 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AVL57_06055 PF00132 Bacterial transferase hexapeptide (six repeats) AVL57_06060 PF02684 Lipid-A-disaccharide synthetase AVL57_06065 PF01351 Ribonuclease HII AVL57_06070 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVL57_06070 PF01336 OB-fold nucleic acid binding domain AVL57_06070 PF14579 Helix-hairpin-helix motif AVL57_06070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVL57_06070 PF02811 PHP domain AVL57_06075 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVL57_06080 PF11734 TilS substrate C-terminal domain AVL57_06080 PF09179 TilS substrate binding domain AVL57_06080 PF01171 PP-loop family AVL57_06085 PF03707 Bacterial signalling protein N terminal repeat AVL57_06085 PF00990 Diguanylate cyclase, GGDEF domain AVL57_06085 PF00563 EAL domain AVL57_06090 PF02254 TrkA-N domain AVL57_06090 PF02080 TrkA-C domain AVL57_06090 PF00999 Sodium/hydrogen exchanger family AVL57_06100 PF14437 MafB19-like deaminase AVL57_06105 PF01464 Transglycosylase SLT domain AVL57_06105 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVL57_06110 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AVL57_06110 PF02769 AIR synthase related protein, C-terminal domain AVL57_06110 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AVL57_06115 PF01713 Smr domain AVL57_06135 PF00270 DEAD/DEAH box helicase AVL57_06135 PF00271 Helicase conserved C-terminal domain AVL57_06140 PF01144 Coenzyme A transferase AVL57_06145 PF01144 Coenzyme A transferase AVL57_06150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_06150 PF03466 LysR substrate binding domain AVL57_06165 PF03466 LysR substrate binding domain AVL57_06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_06170 PF03313 Serine dehydratase alpha chain AVL57_06170 PF03315 Serine dehydratase beta chain AVL57_06175 PF00293 NUDIX domain AVL57_06180 PF04715 Anthranilate synthase component I, N terminal region AVL57_06180 PF00425 chorismate binding enzyme AVL57_06190 PF02646 RmuC family AVL57_06195 PF02225 PA domain AVL57_06195 PF00082 Subtilase family AVL57_06195 PF13860 FlgD Ig-like domain AVL57_06195 PF05922 Peptidase inhibitor I9 AVL57_06200 PF00676 Dehydrogenase E1 component AVL57_06205 PF02779 Transketolase, pyrimidine binding domain AVL57_06205 PF02780 Transketolase, C-terminal domain AVL57_06210 PF02817 e3 binding domain AVL57_06210 PF00364 Biotin-requiring enzyme AVL57_06210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVL57_06215 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AVL57_06220 PF00069 Protein kinase domain AVL57_06230 PF00132 Bacterial transferase hexapeptide (six repeats) AVL57_06235 PF00266 Aminotransferase class-V AVL57_06245 PF13185 GAF domain AVL57_06255 PF17516 ProQ C-terminal domain AVL57_06255 PF04352 ProQ/FINO family AVL57_06260 PF11818 C-terminal domain of tail specific protease (DUF3340) AVL57_06260 PF00595 PDZ domain AVL57_06260 PF03572 Peptidase family S41 AVL57_06260 PF17804 Tail specific protease N-terminal domain AVL57_06265 PF00209 Sodium:neurotransmitter symporter family AVL57_06275 PF01433 Peptidase family M1 domain AVL57_06275 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AVL57_06275 PF11940 Domain of unknown function (DUF3458) Ig-like fold AVL57_06290 PF07044 Protein of unknown function (DUF1329) AVL57_06305 PF05088 Bacterial NAD-glutamate dehydrogenase AVL57_06310 PF01180 Dihydroorotate dehydrogenase AVL57_06315 PF01170 Putative RNA methylase family UPF0020 AVL57_06315 PF10672 S-adenosylmethionine-dependent methyltransferase AVL57_06315 PF02926 THUMP domain AVL57_06335 PF04957 Ribosome modulation factor AVL57_06340 PF07977 FabA-like domain AVL57_06350 PF03441 FAD binding domain of DNA photolyase AVL57_06350 PF00875 DNA photolyase AVL57_06355 PF00875 DNA photolyase AVL57_06355 PF03441 FAD binding domain of DNA photolyase AVL57_06360 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AVL57_06385 PF01219 Prokaryotic diacylglycerol kinase AVL57_06390 PF00582 Universal stress protein family AVL57_06400 PF01645 Conserved region in glutamate synthase AVL57_06410 PF00210 Ferritin-like domain AVL57_06415 PF00210 Ferritin-like domain AVL57_06425 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVL57_06440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVL57_06440 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AVL57_06450 PF00403 Heavy-metal-associated domain AVL57_06465 PF13545 Crp-like helix-turn-helix domain AVL57_06465 PF00027 Cyclic nucleotide-binding domain AVL57_06470 PF00582 Universal stress protein family AVL57_06475 PF01171 PP-loop family AVL57_06480 PF01734 Patatin-like phospholipase AVL57_06500 PF01810 LysE type translocator AVL57_06505 PF02146 Sir2 family AVL57_06510 PF00581 Rhodanese-like domain AVL57_06515 PF08534 Redoxin AVL57_06590 PF00589 Phage integrase family AVL57_06590 PF13356 Arm DNA-binding domain AVL57_06610 PF01066 CDP-alcohol phosphatidyltransferase AVL57_06615 PF01541 GIY-YIG catalytic domain AVL57_06615 PF02151 UvrB/uvrC motif AVL57_06615 PF08459 UvrC Helix-hairpin-helix N-terminal AVL57_06620 PF00072 Response regulator receiver domain AVL57_06620 PF00196 Bacterial regulatory proteins, luxR family AVL57_06625 PF17954 Quercetinase C-terminal cupin domain AVL57_06625 PF02678 Pirin AVL57_06635 PF03781 Sulfatase-modifying factor enzyme 1 AVL57_06635 PF12867 DinB superfamily AVL57_06665 PF00512 His Kinase A (phospho-acceptor) domain AVL57_06665 PF08521 Two-component sensor kinase N-terminal AVL57_06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_06670 PF00486 Transcriptional regulatory protein, C terminal AVL57_06670 PF00072 Response regulator receiver domain AVL57_06685 PF00144 Beta-lactamase AVL57_06695 PF01027 Inhibitor of apoptosis-promoting Bax1 AVL57_06700 PF02635 DsrE/DsrF-like family AVL57_06705 PF02635 DsrE/DsrF-like family AVL57_06715 PF04358 DsrC like protein AVL57_06725 PF02403 Seryl-tRNA synthetase N-terminal domain AVL57_06725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVL57_06730 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVL57_06735 PF12002 MgsA AAA+ ATPase C terminal AVL57_06735 PF00004 ATPase family associated with various cellular activities (AAA) AVL57_06735 PF16193 AAA C-terminal domain AVL57_06740 PF03548 Outer membrane lipoprotein carrier protein LolA AVL57_06745 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AVL57_06745 PF01580 FtsK/SpoIIIE family AVL57_06745 PF17854 FtsK alpha domain AVL57_06745 PF09397 Ftsk gamma domain AVL57_06750 PF01037 Lrp/AsnC ligand binding domain AVL57_06755 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVL57_06755 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVL57_06760 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVL57_06765 PF18073 Rubredoxin metal binding domain AVL57_06770 PF06305 Lipopolysaccharide assembly protein A domain AVL57_06780 PF00216 Bacterial DNA-binding protein AVL57_06785 PF00575 S1 RNA binding domain AVL57_06790 PF02224 Cytidylate kinase AVL57_06795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVL57_06800 PF00266 Aminotransferase class-V AVL57_06805 PF00521 DNA gyrase/topoisomerase IV, subunit A AVL57_06805 PF03989 DNA gyrase C-terminal domain, beta-propeller AVL57_06815 PF03477 ATP cone domain AVL57_06815 PF02867 Ribonucleotide reductase, barrel domain AVL57_06815 PF00317 Ribonucleotide reductase, all-alpha domain AVL57_06820 PF00268 Ribonucleotide reductase, small chain AVL57_06825 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL57_06830 PF00672 HAMP domain AVL57_06830 PF00989 PAS fold AVL57_06830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_06830 PF18698 Histidine kinase sensor domain AVL57_06830 PF00512 His Kinase A (phospho-acceptor) domain AVL57_06835 PF00486 Transcriptional regulatory protein, C terminal AVL57_06835 PF00072 Response regulator receiver domain AVL57_06860 PF07739 TipAS antibiotic-recognition domain AVL57_06860 PF13411 MerR HTH family regulatory protein AVL57_06905 PF02371 Transposase IS116/IS110/IS902 family AVL57_06905 PF01548 Transposase AVL57_06935 PF00005 ABC transporter AVL57_06950 PF07715 TonB-dependent Receptor Plug Domain AVL57_06950 PF00593 TonB dependent receptor AVL57_06960 PF00892 EamA-like transporter family AVL57_06965 PF01259 SAICAR synthetase AVL57_06970 PF06804 NlpB/DapX lipoprotein AVL57_06975 PF00701 Dihydrodipicolinate synthetase family AVL57_06985 PF00578 AhpC/TSA family AVL57_06990 PF01594 AI-2E family transporter AVL57_06995 PF01435 Peptidase family M48 AVL57_07005 PF03960 ArsC family AVL57_07010 PF03358 NADPH-dependent FMN reductase AVL57_07025 PF00308 Bacterial dnaA protein AVL57_07035 PF00586 AIR synthase related protein, N-terminal domain AVL57_07035 PF02769 AIR synthase related protein, C-terminal domain AVL57_07040 PF00551 Formyl transferase AVL57_07050 PF09317 Domain of unknown function (DUF1974) AVL57_07050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL57_07050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL57_07050 PF02770 Acyl-CoA dehydrogenase, middle domain AVL57_07060 PF00196 Bacterial regulatory proteins, luxR family AVL57_07060 PF00072 Response regulator receiver domain AVL57_07065 PF13649 Methyltransferase domain AVL57_07070 PF08003 Protein of unknown function (DUF1698) AVL57_07075 PF00485 Phosphoribulokinase / Uridine kinase family AVL57_07090 PF00128 Alpha amylase, catalytic domain AVL57_07095 PF00994 Probable molybdopterin binding domain AVL57_07095 PF03453 MoeA N-terminal region (domain I and II) AVL57_07095 PF03454 MoeA C-terminal region (domain IV) AVL57_07100 PF01554 MatE AVL57_07120 PF00291 Pyridoxal-phosphate dependent enzyme AVL57_07135 PF00378 Enoyl-CoA hydratase/isomerase AVL57_07150 PF02525 Flavodoxin-like fold AVL57_07155 PF01053 Cys/Met metabolism PLP-dependent enzyme AVL57_07170 PF00155 Aminotransferase class I and II AVL57_07175 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AVL57_07190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL57_07190 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVL57_07190 PF02770 Acyl-CoA dehydrogenase, middle domain AVL57_07190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL57_07195 PF02311 AraC-like ligand binding domain AVL57_07195 PF12833 Helix-turn-helix domain AVL57_07200 PF00593 TonB dependent receptor AVL57_07200 PF07715 TonB-dependent Receptor Plug Domain AVL57_07210 PF00873 AcrB/AcrD/AcrF family AVL57_07215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL57_07215 PF00529 HlyD membrane-fusion protein of T1SS AVL57_07225 PF00766 Electron transfer flavoprotein FAD-binding domain AVL57_07225 PF01012 Electron transfer flavoprotein domain AVL57_07230 PF01012 Electron transfer flavoprotein domain AVL57_07240 PF00816 H-NS histone family AVL57_07245 PF12697 Alpha/beta hydrolase family AVL57_07255 PF00258 Flavodoxin AVL57_07260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_07260 PF00672 HAMP domain AVL57_07265 PF01475 Ferric uptake regulator family AVL57_07270 PF02447 GntP family permease AVL57_07275 PF01202 Shikimate kinase AVL57_07280 PF00356 Bacterial regulatory proteins, lacI family AVL57_07285 PF01063 Amino-transferase class IV AVL57_07290 PF02626 Carboxyltransferase domain, subdomain A and B AVL57_07300 PF03746 LamB/YcsF family AVL57_07305 PF17783 CvfB-like winged helix domain AVL57_07305 PF13509 S1 domain AVL57_07310 PF02566 OsmC-like protein AVL57_07315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL57_07320 PF00873 AcrB/AcrD/AcrF family AVL57_07325 PF00873 AcrB/AcrD/AcrF family AVL57_07340 PF00155 Aminotransferase class I and II AVL57_07350 PF13286 Phosphohydrolase-associated domain AVL57_07350 PF01966 HD domain AVL57_07360 PF00174 Oxidoreductase molybdopterin binding domain AVL57_07365 PF01794 Ferric reductase like transmembrane component AVL57_07370 PF09335 SNARE associated Golgi protein AVL57_07380 PF02810 SEC-C motif AVL57_07390 PF08267 Cobalamin-independent synthase, N-terminal domain AVL57_07390 PF01717 Cobalamin-independent synthase, Catalytic domain AVL57_07415 PF09905 DNA-binding protein VF530 AVL57_07425 PF00583 Acetyltransferase (GNAT) family AVL57_07430 PF00005 ABC transporter AVL57_07440 PF00575 S1 RNA binding domain AVL57_07440 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AVL57_07440 PF00013 KH domain AVL57_07440 PF03725 3' exoribonuclease family, domain 2 AVL57_07440 PF01138 3' exoribonuclease family, domain 1 AVL57_07465 PF00474 Sodium:solute symporter family AVL57_07485 PF00781 Diacylglycerol kinase catalytic domain AVL57_07495 PF00990 Diguanylate cyclase, GGDEF domain AVL57_07495 PF00563 EAL domain AVL57_07495 PF03707 Bacterial signalling protein N terminal repeat AVL57_07505 PF03840 Preprotein translocase SecG subunit AVL57_07510 PF00121 Triosephosphate isomerase AVL57_07515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVL57_07515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVL57_07515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVL57_07515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVL57_07520 PF00809 Pterin binding enzyme AVL57_07525 PF06480 FtsH Extracellular AVL57_07525 PF01434 Peptidase family M41 AVL57_07525 PF17862 AAA+ lid domain AVL57_07525 PF00004 ATPase family associated with various cellular activities (AAA) AVL57_07530 PF01728 FtsJ-like methyltransferase AVL57_07535 PF01985 CRS1 / YhbY (CRM) domain AVL57_07540 PF00106 short chain dehydrogenase AVL57_07545 PF13654 AAA domain AVL57_07545 PF05362 Lon protease (S16) C-terminal proteolytic domain AVL57_07550 PF08264 Anticodon-binding domain of tRNA AVL57_07550 PF00133 tRNA synthetases class I (I, L, M and V) AVL57_07550 PF13603 Leucyl-tRNA synthetase, Domain 2 AVL57_07560 PF06144 DNA polymerase III, delta subunit AVL57_07560 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AVL57_07565 PF01467 Cytidylyltransferase-like AVL57_07575 PF02590 Predicted SPOUT methyltransferase AVL57_07580 PF03717 Penicillin-binding Protein dimerisation domain AVL57_07580 PF00905 Penicillin binding protein transpeptidase domain AVL57_07585 PF01098 Cell cycle protein AVL57_07590 PF05036 Sporulation related domain AVL57_07590 PF03330 Lytic transglycolase AVL57_07595 PF00768 D-alanyl-D-alanine carboxypeptidase AVL57_07595 PF07943 Penicillin-binding protein 5, C-terminal domain AVL57_07600 PF04359 Protein of unknown function (DUF493) AVL57_07605 PF03099 Biotin/lipoate A/B protein ligase family AVL57_07610 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AVL57_07610 PF04055 Radical SAM superfamily AVL57_07620 PF17763 Glutaminase/Asparaginase C-terminal domain AVL57_07620 PF00710 Asparaginase, N-terminal AVL57_07630 PF00881 Nitroreductase family AVL57_07645 PF01343 Peptidase family S49 AVL57_07650 PF10263 SprT-like family AVL57_07650 PF17283 SprT-like zinc ribbon domain AVL57_07655 PF04217 Protein of unknown function, DUF412 AVL57_07665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_07670 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AVL57_07675 PF04376 Arginine-tRNA-protein transferase, N terminus AVL57_07675 PF04377 Arginine-tRNA-protein transferase, C terminus AVL57_07680 PF01176 Translation initiation factor 1A / IF-1 AVL57_07685 PF10431 C-terminal, D2-small domain, of ClpB protein AVL57_07685 PF17871 AAA lid domain AVL57_07685 PF00004 ATPase family associated with various cellular activities (AAA) AVL57_07685 PF02861 Clp amino terminal domain, pathogenicity island component AVL57_07685 PF07724 AAA domain (Cdc48 subfamily) AVL57_07690 PF02617 ATP-dependent Clp protease adaptor protein ClpS AVL57_07695 PF00313 'Cold-shock' DNA-binding domain AVL57_07700 PF03971 Monomeric isocitrate dehydrogenase AVL57_07705 PF00849 RNA pseudouridylate synthase AVL57_07715 PF04356 Protein of unknown function (DUF489) AVL57_07720 PF08328 Adenylosuccinate lyase C-terminal AVL57_07720 PF00206 Lyase AVL57_07725 PF00211 Adenylate and Guanylate cyclase catalytic domain AVL57_07730 PF08007 Cupin superfamily protein AVL57_07745 PF02913 FAD linked oxidases, C-terminal domain AVL57_07745 PF01565 FAD binding domain AVL57_07745 PF13183 4Fe-4S dicluster domain AVL57_07750 PF06865 Pyrimidine/purine nucleoside phosphorylase AVL57_07755 PF11954 Domain of unknown function (DUF3471) AVL57_07755 PF00144 Beta-lactamase AVL57_07800 PF03551 Transcriptional regulator PadR-like family AVL57_07835 PF14592 Chondroitinase B AVL57_07840 PF01202 Shikimate kinase AVL57_07865 PF00356 Bacterial regulatory proteins, lacI family AVL57_07870 PF03547 Membrane transport protein AVL57_07880 PF01799 [2Fe-2S] binding domain AVL57_07880 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL57_07885 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVL57_07890 PF02896 PEP-utilising enzyme, TIM barrel domain AVL57_07890 PF00391 PEP-utilising enzyme, mobile domain AVL57_07890 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVL57_07895 PF03618 Kinase/pyrophosphorylase AVL57_07910 PF14552 Tautomerase enzyme AVL57_07915 PF08310 LGFP repeat AVL57_07915 PF00756 Putative esterase AVL57_07925 PF04191 Phospholipid methyltransferase AVL57_07930 PF06271 RDD family AVL57_07950 PF00072 Response regulator receiver domain AVL57_07950 PF00990 Diguanylate cyclase, GGDEF domain AVL57_07955 PF13460 NAD(P)H-binding AVL57_07965 PF01026 TatD related DNase AVL57_07970 PF09115 DNA polymerase III, delta subunit, C terminal AVL57_07975 PF02223 Thymidylate kinase AVL57_07980 PF02618 YceG-like family AVL57_07985 PF01063 Amino-transferase class IV AVL57_07990 PF00109 Beta-ketoacyl synthase, N-terminal domain AVL57_07990 PF02801 Beta-ketoacyl synthase, C-terminal domain AVL57_07995 PF00550 Phosphopantetheine attachment site AVL57_08005 PF00698 Acyl transferase domain AVL57_08010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVL57_08010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVL57_08015 PF02504 Fatty acid synthesis protein AVL57_08020 PF01783 Ribosomal L32p protein family AVL57_08025 PF02620 Large ribosomal RNA subunit accumulation protein YceD AVL57_08030 PF02545 Maf-like protein AVL57_08035 PF13419 Haloacid dehalogenase-like hydrolase AVL57_08040 PF00849 RNA pseudouridylate synthase AVL57_08040 PF01479 S4 domain AVL57_08045 PF12111 Polyribonucleotide phosphorylase C terminal AVL57_08045 PF10150 Ribonuclease E/G family AVL57_08045 PF00575 S1 RNA binding domain AVL57_08060 PF13419 Haloacid dehalogenase-like hydrolase AVL57_08065 PF13673 Acetyltransferase (GNAT) domain AVL57_08075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_08075 PF03466 LysR substrate binding domain AVL57_08085 PF02798 Glutathione S-transferase, N-terminal domain AVL57_08100 PF00962 Adenosine/AMP deaminase AVL57_08110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_08110 PF03466 LysR substrate binding domain AVL57_08120 PF08272 Topoisomerase I zinc-ribbon-like AVL57_08120 PF01396 Topoisomerase DNA binding C4 zinc finger AVL57_08120 PF01751 Toprim domain AVL57_08120 PF01131 DNA topoisomerase AVL57_08125 PF04996 Succinylarginine dihydrolase AVL57_08135 PF00375 Sodium:dicarboxylate symporter family AVL57_08140 PF02687 FtsX-like permease family AVL57_08140 PF12704 MacB-like periplasmic core domain AVL57_08145 PF00005 ABC transporter AVL57_08150 PF00563 EAL domain AVL57_08150 PF12792 CSS motif domain associated with EAL AVL57_08180 PF00929 Exonuclease AVL57_08185 PF00075 RNase H AVL57_08195 PF17785 PUA-like domain AVL57_08195 PF10672 S-adenosylmethionine-dependent methyltransferase AVL57_08210 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AVL57_08210 PF00270 DEAD/DEAH box helicase AVL57_08210 PF11898 Domain of unknown function (DUF3418) AVL57_08210 PF00271 Helicase conserved C-terminal domain AVL57_08210 PF04408 Helicase associated domain (HA2) AVL57_08240 PF02333 Phytase AVL57_08250 PF00672 HAMP domain AVL57_08250 PF01627 Hpt domain AVL57_08250 PF00072 Response regulator receiver domain AVL57_08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_08250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL57_08250 PF00512 His Kinase A (phospho-acceptor) domain AVL57_08255 PF08411 Exonuclease C-terminal AVL57_08255 PF00929 Exonuclease AVL57_08265 PF00990 Diguanylate cyclase, GGDEF domain AVL57_08265 PF17151 Periplasmic sensor domain AVL57_08270 PF00108 Thiolase, N-terminal domain AVL57_08270 PF02803 Thiolase, C-terminal domain AVL57_08275 PF13411 MerR HTH family regulatory protein AVL57_08280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL57_08280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL57_08280 PF02770 Acyl-CoA dehydrogenase, middle domain AVL57_08285 PF01039 Carboxyl transferase domain AVL57_08290 PF00378 Enoyl-CoA hydratase/isomerase AVL57_08295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVL57_08295 PF00364 Biotin-requiring enzyme AVL57_08295 PF00289 Biotin carboxylase, N-terminal domain AVL57_08295 PF02785 Biotin carboxylase C-terminal domain AVL57_08300 PF00682 HMGL-like AVL57_08310 PF00563 EAL domain AVL57_08310 PF00990 Diguanylate cyclase, GGDEF domain AVL57_08310 PF03707 Bacterial signalling protein N terminal repeat AVL57_08325 PF01156 Inosine-uridine preferring nucleoside hydrolase AVL57_08330 PF00483 Nucleotidyl transferase AVL57_08340 PF07690 Major Facilitator Superfamily AVL57_08375 PF03372 Endonuclease/Exonuclease/phosphatase family AVL57_08390 PF12704 MacB-like periplasmic core domain AVL57_08390 PF02687 FtsX-like permease family AVL57_08400 PF02559 CarD-like/TRCF domain AVL57_08400 PF00270 DEAD/DEAH box helicase AVL57_08400 PF00271 Helicase conserved C-terminal domain AVL57_08400 PF03461 TRCF domain AVL57_08400 PF17757 UvrB interaction domain AVL57_08410 PF01923 Cobalamin adenosyltransferase AVL57_08415 PF00939 Sodium:sulfate symporter transmembrane region AVL57_08420 PF00933 Glycosyl hydrolase family 3 N terminal domain AVL57_08425 PF01804 Penicillin amidase AVL57_08430 PF04073 Aminoacyl-tRNA editing domain AVL57_08440 PF00216 Bacterial DNA-binding protein AVL57_08445 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AVL57_08445 PF03483 B3/4 domain AVL57_08445 PF03484 tRNA synthetase B5 domain AVL57_08445 PF03147 Ferredoxin-fold anticodon binding domain AVL57_08445 PF01588 Putative tRNA binding domain AVL57_08450 PF01409 tRNA synthetases class II core domain (F) AVL57_08450 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVL57_08470 PF01050 Mannose-6-phosphate isomerase AVL57_08470 PF00483 Nucleotidyl transferase AVL57_08495 PF00535 Glycosyl transferase family 2 AVL57_08500 PF13477 Glycosyl transferase 4-like AVL57_08500 PF00534 Glycosyl transferases group 1 AVL57_08510 PF00534 Glycosyl transferases group 1 AVL57_08510 PF13439 Glycosyltransferase Family 4 AVL57_08520 PF03707 Bacterial signalling protein N terminal repeat AVL57_08520 PF00990 Diguanylate cyclase, GGDEF domain AVL57_08520 PF00563 EAL domain AVL57_08550 PF13614 AAA domain AVL57_08555 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AVL57_08555 PF10531 SLBB domain AVL57_08555 PF02563 Polysaccharide biosynthesis/export protein AVL57_08565 PF02397 Bacterial sugar transferase AVL57_08575 PF00453 Ribosomal protein L20 AVL57_08580 PF01632 Ribosomal protein L35 AVL57_08585 PF00707 Translation initiation factor IF-3, C-terminal domain AVL57_08585 PF05198 Translation initiation factor IF-3, N-terminal domain AVL57_08590 PF03129 Anticodon binding domain AVL57_08590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVL57_08590 PF02824 TGS domain AVL57_08590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVL57_08630 PF01425 Amidase AVL57_08640 PF01925 Sulfite exporter TauE/SafE AVL57_08645 PF00266 Aminotransferase class-V AVL57_08650 PF07687 Peptidase dimerisation domain AVL57_08650 PF01546 Peptidase family M20/M25/M40 AVL57_08660 PF00962 Adenosine/AMP deaminase AVL57_08665 PF00860 Permease family AVL57_08670 PF07715 TonB-dependent Receptor Plug Domain AVL57_08670 PF00593 TonB dependent receptor AVL57_08680 PF00512 His Kinase A (phospho-acceptor) domain AVL57_08680 PF09308 LuxQ, periplasmic AVL57_08680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_08680 PF00072 Response regulator receiver domain AVL57_08685 PF00990 Diguanylate cyclase, GGDEF domain AVL57_08685 PF00072 Response regulator receiver domain AVL57_08690 PF03707 Bacterial signalling protein N terminal repeat AVL57_08690 PF00990 Diguanylate cyclase, GGDEF domain AVL57_08690 PF00563 EAL domain AVL57_08700 PF00962 Adenosine/AMP deaminase AVL57_08705 PF00860 Permease family AVL57_08720 PF00440 Bacterial regulatory proteins, tetR family AVL57_08720 PF08362 YcdC-like protein, C-terminal region AVL57_08725 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL57_08725 PF01799 [2Fe-2S] binding domain AVL57_08730 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVL57_08730 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVL57_08745 PF00576 HIUase/Transthyretin family AVL57_08750 PF01979 Amidohydrolase family AVL57_08760 PF08448 PAS fold AVL57_08760 PF08447 PAS fold AVL57_08760 PF05231 MASE1 AVL57_08760 PF00990 Diguanylate cyclase, GGDEF domain AVL57_08760 PF13426 PAS domain AVL57_08760 PF00563 EAL domain AVL57_08780 PF17158 Membrane-associated sensor, integral membrane domain AVL57_08780 PF00990 Diguanylate cyclase, GGDEF domain AVL57_08795 PF04209 homogentisate 1,2-dioxygenase AVL57_08800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVL57_08820 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVL57_08825 PF03960 ArsC family AVL57_08830 PF01546 Peptidase family M20/M25/M40 AVL57_08830 PF07687 Peptidase dimerisation domain AVL57_08845 PF01906 Putative heavy-metal-binding AVL57_08855 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVL57_08860 PF00563 EAL domain AVL57_08860 PF00990 Diguanylate cyclase, GGDEF domain AVL57_08860 PF03707 Bacterial signalling protein N terminal repeat AVL57_08865 PF00343 Carbohydrate phosphorylase AVL57_08870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVL57_08870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVL57_08870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVL57_08870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVL57_08875 PF17206 SeqA protein N-terminal domain AVL57_08875 PF03925 SeqA protein C-terminal domain AVL57_08880 PF07726 ATPase family associated with various cellular activities (AAA) AVL57_08880 PF17863 AAA lid domain AVL57_08890 PF01841 Transglutaminase-like superfamily AVL57_08890 PF13559 Domain of unknown function (DUF4129) AVL57_08890 PF11992 Domain of unknown function (DUF3488) AVL57_08895 PF01226 Formate/nitrite transporter AVL57_08900 PF00069 Protein kinase domain AVL57_08900 PF03793 PASTA domain AVL57_08905 PF02560 Cyanate lyase C-terminal domain AVL57_08915 PF18125 RlmM ferredoxin-like domain AVL57_08915 PF01728 FtsJ-like methyltransferase AVL57_08930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_08930 PF03466 LysR substrate binding domain AVL57_08945 PF04247 Invasion gene expression up-regulator, SirB AVL57_08950 PF11849 Domain of unknown function (DUF3369) AVL57_08955 PF13847 Methyltransferase domain AVL57_08955 PF17827 PrmC N-terminal domain AVL57_08960 PF00472 RF-1 domain AVL57_08960 PF03462 PCRF domain AVL57_08965 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AVL57_08965 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AVL57_08965 PF01488 Shikimate / quinate 5-dehydrogenase AVL57_08970 PF03550 Outer membrane lipoprotein LolB AVL57_08975 PF08544 GHMP kinases C terminal AVL57_08975 PF00288 GHMP kinases N terminal domain AVL57_08985 PF14572 Phosphoribosyl synthetase-associated domain AVL57_08985 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVL57_08990 PF00563 EAL domain AVL57_08990 PF13188 PAS domain AVL57_08990 PF03707 Bacterial signalling protein N terminal repeat AVL57_08990 PF00990 Diguanylate cyclase, GGDEF domain AVL57_09000 PF00107 Zinc-binding dehydrogenase AVL57_09000 PF08240 Alcohol dehydrogenase GroES-like domain AVL57_09005 PF14693 Ribosomal protein TL5, C-terminal domain AVL57_09005 PF01386 Ribosomal L25p family AVL57_09010 PF01195 Peptidyl-tRNA hydrolase AVL57_09015 PF01926 50S ribosome-binding GTPase AVL57_09015 PF06071 Protein of unknown function (DUF933) AVL57_09020 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVL57_09045 PF01235 Sodium:alanine symporter family AVL57_09050 PF01613 Flavin reductase like domain AVL57_09065 PF01494 FAD binding domain AVL57_09070 PF01938 TRAM domain AVL57_09070 PF00919 Uncharacterized protein family UPF0004 AVL57_09070 PF04055 Radical SAM superfamily AVL57_09075 PF02562 PhoH-like protein AVL57_09080 PF02130 Uncharacterized protein family UPF0054 AVL57_09085 PF00571 CBS domain AVL57_09085 PF03471 Transporter associated domain AVL57_09090 PF00795 Carbon-nitrogen hydrolase AVL57_09095 PF07085 DRTGG domain AVL57_09095 PF01515 Phosphate acetyl/butaryl transferase AVL57_09100 PF00871 Acetokinase family AVL57_09105 PF00011 Hsp20/alpha crystallin family AVL57_09125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_09125 PF00672 HAMP domain AVL57_09125 PF12729 Four helix bundle sensory module for signal transduction AVL57_09130 PF01272 Transcription elongation factor, GreA/GreB, C-term AVL57_09130 PF03449 Transcription elongation factor, N-terminal AVL57_09135 PF02142 MGS-like domain AVL57_09135 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVL57_09135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVL57_09140 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVL57_09140 PF00117 Glutamine amidotransferase class-I AVL57_09145 PF05173 Dihydrodipicolinate reductase, C-terminus AVL57_09145 PF01113 Dihydrodipicolinate reductase, N-terminus AVL57_09155 PF13193 AMP-binding enzyme C-terminal domain AVL57_09155 PF00501 AMP-binding enzyme AVL57_09155 PF16177 Acetyl-coenzyme A synthetase N-terminus AVL57_09160 PF00990 Diguanylate cyclase, GGDEF domain AVL57_09160 PF01590 GAF domain AVL57_09160 PF00563 EAL domain AVL57_09160 PF00360 Phytochrome region AVL57_09165 PF01322 Cytochrome C' AVL57_09170 PF01556 DnaJ C terminal domain AVL57_09170 PF00226 DnaJ domain AVL57_09170 PF00684 DnaJ central domain AVL57_09175 PF00012 Hsp70 protein AVL57_09180 PF01025 GrpE AVL57_09185 PF00072 Response regulator receiver domain AVL57_09185 PF09308 LuxQ, periplasmic AVL57_09185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_09185 PF00512 His Kinase A (phospho-acceptor) domain AVL57_09190 PF00072 Response regulator receiver domain AVL57_09190 PF00196 Bacterial regulatory proteins, luxR family AVL57_09195 PF00593 TonB dependent receptor AVL57_09195 PF07715 TonB-dependent Receptor Plug Domain AVL57_09205 PF00561 alpha/beta hydrolase fold AVL57_09225 PF02463 RecF/RecN/SMC N terminal domain AVL57_09230 PF04355 SmpA / OmlA family AVL57_09235 PF05724 Thiopurine S-methyltransferase (TPMT) AVL57_09240 PF04286 Protein of unknown function (DUF445) AVL57_09245 PF03960 ArsC family AVL57_09255 PF14602 Hexapeptide repeat of succinyl-transferase AVL57_09255 PF12464 Maltose acetyltransferase AVL57_09260 PF00248 Aldo/keto reductase family AVL57_09270 PF00849 RNA pseudouridylate synthase AVL57_09270 PF01479 S4 domain AVL57_09275 PF04079 Segregation and condensation complex subunit ScpB AVL57_09280 PF02616 Segregation and condensation protein ScpA AVL57_09285 PF01300 Telomere recombination AVL57_09290 PF02811 PHP domain AVL57_09295 PF04715 Anthranilate synthase component I, N terminal region AVL57_09295 PF00425 chorismate binding enzyme AVL57_09300 PF00117 Glutamine amidotransferase class-I AVL57_09305 PF02885 Glycosyl transferase family, helical bundle domain AVL57_09305 PF00591 Glycosyl transferase family, a/b domain AVL57_09310 PF00218 Indole-3-glycerol phosphate synthase AVL57_09310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVL57_09315 PF00291 Pyridoxal-phosphate dependent enzyme AVL57_09320 PF00290 Tryptophan synthase alpha chain AVL57_09325 PF03795 YCII-related domain AVL57_09340 PF00072 Response regulator receiver domain AVL57_09340 PF00486 Transcriptional regulatory protein, C terminal AVL57_09345 PF08918 PhoQ Sensor AVL57_09345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_09350 PF01594 AI-2E family transporter AVL57_09355 PF02152 Dihydroneopterin aldolase AVL57_09360 PF08338 Domain of unknown function (DUF1731) AVL57_09360 PF01370 NAD dependent epimerase/dehydratase family AVL57_09370 PF00005 ABC transporter AVL57_09375 PF13472 GDSL-like Lipase/Acylhydrolase family AVL57_09390 PF01207 Dihydrouridine synthase (Dus) AVL57_09425 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVL57_09445 PF00486 Transcriptional regulatory protein, C terminal AVL57_09445 PF00072 Response regulator receiver domain AVL57_09455 PF06463 Molybdenum Cofactor Synthesis C AVL57_09455 PF04055 Radical SAM superfamily AVL57_09460 PF00664 ABC transporter transmembrane region AVL57_09460 PF00005 ABC transporter AVL57_09475 PF01474 Class-II DAHP synthetase family AVL57_09480 PF00005 ABC transporter AVL57_09485 PF01032 FecCD transport family AVL57_09490 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVL57_09495 PF03575 Peptidase family S51 AVL57_09505 PF12697 Alpha/beta hydrolase family AVL57_09505 PF08241 Methyltransferase domain AVL57_09510 PF00155 Aminotransferase class I and II AVL57_09515 PF04055 Radical SAM superfamily AVL57_09515 PF06968 Biotin and Thiamin Synthesis associated domain AVL57_09520 PF00202 Aminotransferase class-III AVL57_09535 PF00583 Acetyltransferase (GNAT) family AVL57_09540 PF08443 RimK-like ATP-grasp domain AVL57_09540 PF18030 RimK PreATP-grasp domain AVL57_09545 PF01699 Sodium/calcium exchanger protein AVL57_09555 PF01336 OB-fold nucleic acid binding domain AVL57_09555 PF00152 tRNA synthetases class II (D, K and N) AVL57_09565 PF04403 Paraquat-inducible protein A AVL57_09570 PF02470 MlaD protein AVL57_09580 PF00990 Diguanylate cyclase, GGDEF domain AVL57_09585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL57_09590 PF00873 AcrB/AcrD/AcrF family AVL57_09600 PF03466 LysR substrate binding domain AVL57_09600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_09605 PF00440 Bacterial regulatory proteins, tetR family AVL57_09605 PF08361 MAATS-type transcriptional repressor, C-terminal region AVL57_09615 PF00873 AcrB/AcrD/AcrF family AVL57_09620 PF00571 CBS domain AVL57_09625 PF00107 Zinc-binding dehydrogenase AVL57_09625 PF08240 Alcohol dehydrogenase GroES-like domain AVL57_09630 PF08240 Alcohol dehydrogenase GroES-like domain AVL57_09630 PF00107 Zinc-binding dehydrogenase AVL57_09635 PF03466 LysR substrate binding domain AVL57_09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_09640 PF01292 Prokaryotic cytochrome b561 AVL57_09645 PF00106 short chain dehydrogenase AVL57_09650 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVL57_09650 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVL57_09675 PF07690 Major Facilitator Superfamily AVL57_09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_09680 PF00072 Response regulator receiver domain AVL57_09680 PF00512 His Kinase A (phospho-acceptor) domain AVL57_09680 PF09308 LuxQ, periplasmic AVL57_09720 PF00557 Metallopeptidase family M24 AVL57_09730 PF00072 Response regulator receiver domain AVL57_09730 PF00990 Diguanylate cyclase, GGDEF domain AVL57_09735 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AVL57_09755 PF02445 Quinolinate synthetase A protein AVL57_09775 PF16331 TolA binding protein trimerisation AVL57_09775 PF13174 Tetratricopeptide repeat AVL57_09780 PF00691 OmpA family AVL57_09785 PF04052 TolB amino-terminal domain AVL57_09785 PF07676 WD40-like Beta Propeller Repeat AVL57_09795 PF02472 Biopolymer transport protein ExbD/TolR AVL57_09800 PF01618 MotA/TolQ/ExbB proton channel family AVL57_09805 PF03061 Thioesterase superfamily AVL57_09810 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVL57_09810 PF05491 RuvB C-terminal winged helix domain AVL57_09810 PF17864 RuvB AAA lid domain AVL57_09825 PF00293 NUDIX domain AVL57_09830 PF01336 OB-fold nucleic acid binding domain AVL57_09830 PF00152 tRNA synthetases class II (D, K and N) AVL57_09830 PF02938 GAD domain AVL57_09845 PF00158 Sigma-54 interaction domain AVL57_09845 PF00072 Response regulator receiver domain AVL57_09855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_09855 PF00512 His Kinase A (phospho-acceptor) domain AVL57_09865 PF00990 Diguanylate cyclase, GGDEF domain AVL57_09865 PF00563 EAL domain AVL57_09865 PF03707 Bacterial signalling protein N terminal repeat AVL57_09875 PF00990 Diguanylate cyclase, GGDEF domain AVL57_09875 PF00072 Response regulator receiver domain AVL57_09885 PF01253 Translation initiation factor SUI1 AVL57_09890 PF00072 Response regulator receiver domain AVL57_09895 PF01817 Chorismate mutase type II AVL57_09895 PF00800 Prephenate dehydratase AVL57_09900 PF12729 Four helix bundle sensory module for signal transduction AVL57_09900 PF00672 HAMP domain AVL57_09900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_09905 PF02153 Prephenate dehydrogenase AVL57_09905 PF01817 Chorismate mutase type II AVL57_09910 PF00793 DAHP synthetase I family AVL57_09915 PF03458 UPF0126 domain AVL57_09930 PF01245 Ribosomal protein L19 AVL57_09935 PF01746 tRNA (Guanine-1)-methyltransferase AVL57_09940 PF05239 PRC-barrel domain AVL57_09940 PF01782 RimM N-terminal domain AVL57_09945 PF00886 Ribosomal protein S16 AVL57_09960 PF01053 Cys/Met metabolism PLP-dependent enzyme AVL57_09965 PF00664 ABC transporter transmembrane region AVL57_09965 PF00005 ABC transporter AVL57_09970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL57_09975 PF00873 AcrB/AcrD/AcrF family AVL57_09980 PF03600 Citrate transporter AVL57_10010 PF00448 SRP54-type protein, GTPase domain AVL57_10010 PF02978 Signal peptide binding domain AVL57_10010 PF02881 SRP54-type protein, helical bundle domain AVL57_10015 PF01578 Cytochrome C assembly protein AVL57_10020 PF00571 CBS domain AVL57_10020 PF03471 Transporter associated domain AVL57_10020 PF01595 Cyclin M transmembrane N-terminal domain AVL57_10030 PF00300 Histidine phosphatase superfamily (branch 1) AVL57_10035 PF05193 Peptidase M16 inactive domain AVL57_10035 PF00675 Insulinase (Peptidase family M16) AVL57_10035 PF16187 Middle or third domain of peptidase_M16 AVL57_10040 PF00563 EAL domain AVL57_10040 PF03707 Bacterial signalling protein N terminal repeat AVL57_10040 PF00990 Diguanylate cyclase, GGDEF domain AVL57_10050 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVL57_10050 PF00378 Enoyl-CoA hydratase/isomerase AVL57_10050 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVL57_10055 PF02803 Thiolase, C-terminal domain AVL57_10055 PF00108 Thiolase, N-terminal domain AVL57_10060 PF07726 ATPase family associated with various cellular activities (AAA) AVL57_10060 PF17863 AAA lid domain AVL57_10065 PF01882 Protein of unknown function DUF58 AVL57_10075 PF00092 von Willebrand factor type A domain AVL57_10080 PF07584 Aerotolerance regulator N-terminal AVL57_10080 PF00092 von Willebrand factor type A domain AVL57_10095 PF04542 Sigma-70 region 2 AVL57_10095 PF04545 Sigma-70, region 4 AVL57_10105 PF00990 Diguanylate cyclase, GGDEF domain AVL57_10105 PF17158 Membrane-associated sensor, integral membrane domain AVL57_10110 PF00474 Sodium:solute symporter family AVL57_10115 PF01507 Phosphoadenosine phosphosulfate reductase family AVL57_10125 PF00459 Inositol monophosphatase family AVL57_10130 PF00009 Elongation factor Tu GTP binding domain AVL57_10135 PF03600 Citrate transporter AVL57_10135 PF02080 TrkA-C domain AVL57_10160 PF13537 Glutamine amidotransferase domain AVL57_10160 PF00733 Asparagine synthase AVL57_10170 PF04055 Radical SAM superfamily AVL57_10175 PF06508 Queuosine biosynthesis protein QueC AVL57_10195 PF04851 Type III restriction enzyme, res subunit AVL57_10195 PF00271 Helicase conserved C-terminal domain AVL57_10195 PF12344 Ultra-violet resistance protein B AVL57_10195 PF17757 UvrB interaction domain AVL57_10195 PF02151 UvrB/uvrC motif AVL57_10200 PF01554 MatE AVL57_10215 PF02508 Rnf-Nqr subunit, membrane protein AVL57_10220 PF04060 Putative Fe-S cluster AVL57_10225 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AVL57_10225 PF13375 RnfC Barrel sandwich hybrid domain AVL57_10225 PF10531 SLBB domain AVL57_10225 PF12838 4Fe-4S dicluster domain AVL57_10230 PF03116 NQR2, RnfD, RnfE family AVL57_10240 PF02508 Rnf-Nqr subunit, membrane protein AVL57_10245 PF00633 Helix-hairpin-helix motif AVL57_10245 PF00730 HhH-GPD superfamily base excision DNA repair protein AVL57_10245 PF10576 Iron-sulfur binding domain of endonuclease III AVL57_10270 PF00561 alpha/beta hydrolase fold AVL57_10275 PF00326 Prolyl oligopeptidase family AVL57_10275 PF07676 WD40-like Beta Propeller Repeat AVL57_10280 PF02225 PA domain AVL57_10280 PF04389 Peptidase family M28 AVL57_10290 PF00990 Diguanylate cyclase, GGDEF domain AVL57_10290 PF03707 Bacterial signalling protein N terminal repeat AVL57_10290 PF00563 EAL domain AVL57_10300 PF00313 'Cold-shock' DNA-binding domain AVL57_10305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVL57_10310 PF03009 Glycerophosphoryl diester phosphodiesterase family AVL57_10315 PF00691 OmpA family AVL57_10315 PF18393 MotY N-terminal domain AVL57_10320 PF00929 Exonuclease AVL57_10325 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVL57_10325 PF00578 AhpC/TSA family AVL57_10330 PF04324 BFD-like [2Fe-2S] binding domain AVL57_10350 PF07715 TonB-dependent Receptor Plug Domain AVL57_10350 PF00593 TonB dependent receptor AVL57_10355 PF00462 Glutaredoxin AVL57_10365 PF08298 PrkA AAA domain AVL57_10365 PF06798 PrkA serine protein kinase C-terminal domain AVL57_10370 PF04285 Protein of unknown function (DUF444) AVL57_10375 PF04293 SpoVR like protein AVL57_10390 PF01264 Chorismate synthase AVL57_10395 PF05175 Methyltransferase small domain AVL57_10400 PF01713 Smr domain AVL57_10405 PF00512 His Kinase A (phospho-acceptor) domain AVL57_10405 PF00989 PAS fold AVL57_10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_10410 PF00158 Sigma-54 interaction domain AVL57_10410 PF00072 Response regulator receiver domain AVL57_10410 PF02954 Bacterial regulatory protein, Fis family AVL57_10415 PF02687 FtsX-like permease family AVL57_10415 PF00005 ABC transporter AVL57_10415 PF12704 MacB-like periplasmic core domain AVL57_10425 PF00005 ABC transporter AVL57_10450 PF05193 Peptidase M16 inactive domain AVL57_10450 PF00675 Insulinase (Peptidase family M16) AVL57_10460 PF00849 RNA pseudouridylate synthase AVL57_10465 PF08546 Ketopantoate reductase PanE/ApbA C terminal AVL57_10465 PF02558 Ketopantoate reductase PanE/ApbA AVL57_10470 PF01336 OB-fold nucleic acid binding domain AVL57_10470 PF00152 tRNA synthetases class II (D, K and N) AVL57_10475 PF00472 RF-1 domain AVL57_10475 PF03462 PCRF domain AVL57_10490 PF01966 HD domain AVL57_10495 PF06155 Protein of unknown function (DUF971) AVL57_10495 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVL57_10510 PF03707 Bacterial signalling protein N terminal repeat AVL57_10510 PF00990 Diguanylate cyclase, GGDEF domain AVL57_10510 PF00563 EAL domain AVL57_10515 PF05746 DALR anticodon binding domain AVL57_10515 PF00750 tRNA synthetases class I (R) AVL57_10515 PF03485 Arginyl tRNA synthetase N terminal domain AVL57_10520 PF03144 Elongation factor Tu domain 2 AVL57_10520 PF00009 Elongation factor Tu GTP binding domain AVL57_10520 PF16658 Class II release factor RF3, C-terminal domain AVL57_10525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_10525 PF03466 LysR substrate binding domain AVL57_10540 PF00583 Acetyltransferase (GNAT) family AVL57_10580 PF08351 Domain of unknown function (DUF1726) AVL57_10580 PF13718 GNAT acetyltransferase 2 AVL57_10580 PF05127 Helicase AVL57_10580 PF17176 tRNA-binding domain AVL57_10590 PF03544 Gram-negative bacterial TonB protein C-terminal AVL57_10595 PF02472 Biopolymer transport protein ExbD/TolR AVL57_10600 PF01618 MotA/TolQ/ExbB proton channel family AVL57_10605 PF01618 MotA/TolQ/ExbB proton channel family AVL57_10640 PF07715 TonB-dependent Receptor Plug Domain AVL57_10640 PF00593 TonB dependent receptor AVL57_10645 PF13181 Tetratricopeptide repeat AVL57_10650 PF00593 TonB dependent receptor AVL57_10655 PF03301 Tryptophan 2,3-dioxygenase AVL57_10670 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVL57_10670 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVL57_10675 PF01037 Lrp/AsnC ligand binding domain AVL57_10680 PF14497 Glutathione S-transferase, C-terminal domain AVL57_10680 PF02798 Glutathione S-transferase, N-terminal domain AVL57_10690 PF00158 Sigma-54 interaction domain AVL57_10690 PF18024 Helix-turn-helix domain AVL57_10695 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AVL57_10705 PF06667 Phage shock protein B AVL57_10710 PF04012 PspA/IM30 family AVL57_10715 PF00158 Sigma-54 interaction domain AVL57_10715 PF02954 Bacterial regulatory protein, Fis family AVL57_10720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVL57_10725 PF00528 Binding-protein-dependent transport system inner membrane component AVL57_10730 PF00528 Binding-protein-dependent transport system inner membrane component AVL57_10730 PF12911 N-terminal TM domain of oligopeptide transport permease C AVL57_10735 PF00005 ABC transporter AVL57_10735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVL57_10740 PF00005 ABC transporter AVL57_10745 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AVL57_10750 PF00682 HMGL-like AVL57_10750 PF00364 Biotin-requiring enzyme AVL57_10750 PF02436 Conserved carboxylase domain AVL57_10760 PF03061 Thioesterase superfamily AVL57_10780 PF02599 Global regulator protein family AVL57_10800 PF05649 Peptidase family M13 AVL57_10800 PF01431 Peptidase family M13 AVL57_10805 PF00440 Bacterial regulatory proteins, tetR family AVL57_10805 PF13977 BetI-type transcriptional repressor, C-terminal AVL57_10815 PF01740 STAS domain AVL57_10815 PF00916 Sulfate permease family AVL57_10820 PF00484 Carbonic anhydrase AVL57_10825 PF03466 LysR substrate binding domain AVL57_10825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_10830 PF03466 LysR substrate binding domain AVL57_10840 PF00809 Pterin binding enzyme AVL57_10840 PF02310 B12 binding domain AVL57_10840 PF02607 B12 binding domain AVL57_10840 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVL57_10840 PF02574 Homocysteine S-methyltransferase AVL57_10845 PF02574 Homocysteine S-methyltransferase AVL57_10845 PF02310 B12 binding domain AVL57_10845 PF02607 B12 binding domain AVL57_10845 PF00809 Pterin binding enzyme AVL57_10845 PF02965 Vitamin B12 dependent methionine synthase, activation domain AVL57_10850 PF04204 Homoserine O-succinyltransferase AVL57_10860 PF01584 CheW-like domain AVL57_10870 PF13614 AAA domain AVL57_10875 PF00072 Response regulator receiver domain AVL57_10875 PF01339 CheB methylesterase AVL57_10880 PF07194 P2 response regulator binding domain AVL57_10880 PF01627 Hpt domain AVL57_10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_10880 PF01584 CheW-like domain AVL57_10880 PF02895 Signal transducing histidine kinase, homodimeric domain AVL57_10885 PF04344 Chemotaxis phosphatase, CheZ AVL57_10890 PF00072 Response regulator receiver domain AVL57_10895 PF04545 Sigma-70, region 4 AVL57_10895 PF04539 Sigma-70 region 3 AVL57_10895 PF04542 Sigma-70 region 2 AVL57_10900 PF10609 NUBPL iron-transfer P-loop NTPase AVL57_10905 PF00448 SRP54-type protein, GTPase domain AVL57_10910 PF00771 FHIPEP family AVL57_10915 PF01312 FlhB HrpN YscU SpaS Family AVL57_10920 PF01311 Bacterial export proteins, family 1 AVL57_10925 PF01313 Bacterial export proteins, family 3 AVL57_10930 PF00813 FliP family AVL57_10935 PF04347 Flagellar biosynthesis protein, FliO AVL57_10940 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVL57_10945 PF02154 Flagellar motor switch protein FliM AVL57_10945 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AVL57_10965 PF18269 T3SS EscN ATPase C-terminal domain AVL57_10965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVL57_10975 PF01706 FliG C-terminal domain AVL57_10975 PF14841 FliG middle domain AVL57_10975 PF14842 FliG N-terminal domain AVL57_10980 PF01514 Secretory protein of YscJ/FliF family AVL57_10980 PF08345 Flagellar M-ring protein C-terminal AVL57_10985 PF02049 Flagellar hook-basal body complex protein FliE AVL57_10990 PF00158 Sigma-54 interaction domain AVL57_10990 PF02954 Bacterial regulatory protein, Fis family AVL57_10995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_10995 PF00989 PAS fold AVL57_10995 PF00512 His Kinase A (phospho-acceptor) domain AVL57_11000 PF00072 Response regulator receiver domain AVL57_11000 PF00158 Sigma-54 interaction domain AVL57_11000 PF02954 Bacterial regulatory protein, Fis family AVL57_11005 PF08884 Flagellin D3 domain AVL57_11005 PF00669 Bacterial flagellin N-terminal helical region AVL57_11005 PF00700 Bacterial flagellin C-terminal helical region AVL57_11015 PF02348 Cytidylyltransferase AVL57_11025 PF08666 SAF domain AVL57_11025 PF03102 NeuB family AVL57_11040 PF13193 AMP-binding enzyme C-terminal domain AVL57_11040 PF00501 AMP-binding enzyme AVL57_11050 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVL57_11065 PF02348 Cytidylyltransferase AVL57_11065 PF13472 GDSL-like Lipase/Acylhydrolase family AVL57_11080 PF03102 NeuB family AVL57_11080 PF08666 SAF domain AVL57_11085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AVL57_11090 PF16363 GDP-mannose 4,6 dehydratase AVL57_11100 PF11380 Stealth protein CR2, conserved region 2 AVL57_11100 PF17101 Stealth protein CR1, conserved region 1 AVL57_11100 PF17102 Stealth protein CR3, conserved region 3 AVL57_11115 PF02561 Flagellar protein FliS AVL57_11120 PF02465 Flagellar hook-associated protein 2 N-terminus AVL57_11120 PF07195 Flagellar hook-associated protein 2 C-terminus AVL57_11120 PF07196 Flagellin hook IN motif AVL57_11125 PF03646 FlaG protein AVL57_11130 PF00669 Bacterial flagellin N-terminal helical region AVL57_11130 PF07196 Flagellin hook IN motif AVL57_11130 PF00700 Bacterial flagellin C-terminal helical region AVL57_11135 PF00700 Bacterial flagellin C-terminal helical region AVL57_11135 PF07196 Flagellin hook IN motif AVL57_11135 PF00669 Bacterial flagellin N-terminal helical region AVL57_11140 PF00669 Bacterial flagellin N-terminal helical region AVL57_11140 PF07196 Flagellin hook IN motif AVL57_11140 PF00700 Bacterial flagellin C-terminal helical region AVL57_11155 PF00460 Flagella basal body rod protein AVL57_11155 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVL57_11160 PF10135 Rod binding protein AVL57_11160 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AVL57_11165 PF02119 Flagellar P-ring protein AVL57_11170 PF02107 Flagellar L-ring protein AVL57_11175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVL57_11175 PF00460 Flagella basal body rod protein AVL57_11180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVL57_11180 PF00460 Flagella basal body rod protein AVL57_11185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVL57_11185 PF00460 Flagella basal body rod protein AVL57_11185 PF07559 Flagellar basal body protein FlaE AVL57_11190 PF13860 FlgD Ig-like domain AVL57_11190 PF13861 FlgD Tudor-like domain AVL57_11190 PF03963 Flagellar hook capping protein - N-terminal region AVL57_11195 PF00460 Flagella basal body rod protein AVL57_11195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AVL57_11200 PF00460 Flagella basal body rod protein AVL57_11205 PF01739 CheR methyltransferase, SAM binding domain AVL57_11205 PF03705 CheR methyltransferase, all-alpha domain AVL57_11210 PF01584 CheW-like domain AVL57_11210 PF00072 Response regulator receiver domain AVL57_11250 PF00196 Bacterial regulatory proteins, luxR family AVL57_11250 PF00072 Response regulator receiver domain AVL57_11255 PF00529 HlyD membrane-fusion protein of T1SS AVL57_11255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL57_11260 PF00005 ABC transporter AVL57_11260 PF03412 Peptidase C39 family AVL57_11260 PF00664 ABC transporter transmembrane region AVL57_11265 PF00223 Photosystem I psaA/psaB protein AVL57_11265 PF00691 OmpA family AVL57_11350 PF00849 RNA pseudouridylate synthase AVL57_11350 PF01479 S4 domain AVL57_11370 PF01627 Hpt domain AVL57_11370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_11370 PF00072 Response regulator receiver domain AVL57_11370 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVL57_11370 PF00512 His Kinase A (phospho-acceptor) domain AVL57_11370 PF00989 PAS fold AVL57_11380 PF00365 Phosphofructokinase AVL57_11385 PF04397 LytTr DNA-binding domain AVL57_11385 PF00072 Response regulator receiver domain AVL57_11390 PF06580 Histidine kinase AVL57_11390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_11390 PF07694 5TMR of 5TMR-LYT AVL57_11410 PF01476 LysM domain AVL57_11410 PF01551 Peptidase family M23 AVL57_11420 PF04245 37-kD nucleoid-associated bacterial protein AVL57_11425 PF07208 Protein of unknown function (DUF1414) AVL57_11430 PF00884 Sulfatase AVL57_11430 PF11893 Domain of unknown function (DUF3413) AVL57_11435 PF08645 Polynucleotide kinase 3 phosphatase AVL57_11440 PF13847 Methyltransferase domain AVL57_11445 PF00378 Enoyl-CoA hydratase/isomerase AVL57_11450 PF02770 Acyl-CoA dehydrogenase, middle domain AVL57_11450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL57_11450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL57_11460 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVL57_11460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVL57_11465 PF00255 Glutathione peroxidase AVL57_11470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVL57_11470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVL57_11480 PF01784 NIF3 (NGG1p interacting factor 3) AVL57_11500 PF00440 Bacterial regulatory proteins, tetR family AVL57_11505 PF08496 Peptidase family S49 N-terminal AVL57_11505 PF01343 Peptidase family S49 AVL57_11510 PF01804 Penicillin amidase AVL57_11515 PF12262 Bacterial virulence factor lipase N-terminal AVL57_11520 PF00106 short chain dehydrogenase AVL57_11525 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AVL57_11525 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVL57_11530 PF00356 Bacterial regulatory proteins, lacI family AVL57_11535 PF00128 Alpha amylase, catalytic domain AVL57_11535 PF00686 Starch binding domain AVL57_11545 PF10438 Cyclo-malto-dextrinase C-terminal domain AVL57_11545 PF09087 Cyclomaltodextrinase, N-terminal AVL57_11545 PF00128 Alpha amylase, catalytic domain AVL57_11550 PF16657 Maltogenic Amylase, C-terminal domain AVL57_11550 PF02903 Alpha amylase, N-terminal ig-like domain AVL57_11550 PF00128 Alpha amylase, catalytic domain AVL57_11565 PF01734 Patatin-like phospholipase AVL57_11570 PF18494 Pullulanase Ins domain AVL57_11570 PF11852 Domain of unknown function (DUF3372) AVL57_11570 PF17967 Pullulanase N2 domain AVL57_11570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVL57_11570 PF03714 Bacterial pullanase-associated domain AVL57_11580 PF04820 Tryptophan halogenase AVL57_11590 PF00549 CoA-ligase AVL57_11590 PF02629 CoA binding domain AVL57_11595 PF08442 ATP-grasp domain AVL57_11595 PF00549 CoA-ligase AVL57_11600 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVL57_11600 PF00364 Biotin-requiring enzyme AVL57_11600 PF02817 e3 binding domain AVL57_11605 PF16870 2-oxoglutarate dehydrogenase C-terminal AVL57_11605 PF16078 2-oxoglutarate dehydrogenase N-terminus AVL57_11605 PF02779 Transketolase, pyrimidine binding domain AVL57_11605 PF00676 Dehydrogenase E1 component AVL57_11610 PF13085 2Fe-2S iron-sulfur cluster binding domain AVL57_11615 PF02910 Fumarate reductase flavoprotein C-term AVL57_11615 PF00890 FAD binding domain AVL57_11620 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVL57_11625 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AVL57_11630 PF00285 Citrate synthase, C-terminal domain AVL57_11640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVL57_11640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVL57_11640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVL57_11640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVL57_11645 PF13409 Glutathione S-transferase, N-terminal domain AVL57_11650 PF01266 FAD dependent oxidoreductase AVL57_11655 PF00899 ThiF family AVL57_11675 PF00919 Uncharacterized protein family UPF0004 AVL57_11675 PF18693 TRAM domain AVL57_11675 PF04055 Radical SAM superfamily AVL57_11685 PF02348 Cytidylyltransferase AVL57_11690 PF03966 Trm112p-like protein AVL57_11695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AVL57_11700 PF00005 ABC transporter AVL57_11700 PF00664 ABC transporter transmembrane region AVL57_11715 PF01653 NAD-dependent DNA ligase adenylation domain AVL57_11715 PF00533 BRCA1 C Terminus (BRCT) domain AVL57_11715 PF12826 Helix-hairpin-helix motif AVL57_11715 PF03120 NAD-dependent DNA ligase OB-fold domain AVL57_11715 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVL57_11720 PF04354 ZipA, C-terminal FtsZ-binding domain AVL57_11725 PF02463 RecF/RecN/SMC N terminal domain AVL57_11725 PF06470 SMC proteins Flexible Hinge Domain AVL57_11740 PF07719 Tetratricopeptide repeat AVL57_11740 PF13181 Tetratricopeptide repeat AVL57_11745 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVL57_11765 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_11765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL57_11770 PF07690 Major Facilitator Superfamily AVL57_11790 PF05163 DinB family AVL57_11795 PF13181 Tetratricopeptide repeat AVL57_11800 PF00593 TonB dependent receptor AVL57_11800 PF07715 TonB-dependent Receptor Plug Domain AVL57_11805 PF02028 BCCT, betaine/carnitine/choline family transporter AVL57_11815 PF03658 RnfH family Ubiquitin AVL57_11820 PF03364 Polyketide cyclase / dehydrase and lipid transport AVL57_11825 PF01668 SmpB protein AVL57_11830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL57_11830 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_11845 PF07715 TonB-dependent Receptor Plug Domain AVL57_11845 PF00593 TonB dependent receptor AVL57_11850 PF07690 Major Facilitator Superfamily AVL57_11855 PF00652 Ricin-type beta-trefoil lectin domain AVL57_11875 PF05199 GMC oxidoreductase AVL57_11875 PF00732 GMC oxidoreductase AVL57_11880 PF00171 Aldehyde dehydrogenase family AVL57_11890 PF08281 Sigma-70, region 4 AVL57_11890 PF04542 Sigma-70 region 2 AVL57_11895 PF12146 Serine aminopeptidase, S33 AVL57_11915 PF07715 TonB-dependent Receptor Plug Domain AVL57_11915 PF00593 TonB dependent receptor AVL57_11920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_11920 PF03466 LysR substrate binding domain AVL57_11940 PF00563 EAL domain AVL57_11940 PF00990 Diguanylate cyclase, GGDEF domain AVL57_11940 PF03707 Bacterial signalling protein N terminal repeat AVL57_11955 PF00990 Diguanylate cyclase, GGDEF domain AVL57_11955 PF00360 Phytochrome region AVL57_11955 PF01590 GAF domain AVL57_11955 PF00563 EAL domain AVL57_11970 PF01066 CDP-alcohol phosphatidyltransferase AVL57_11975 PF00005 ABC transporter AVL57_11980 PF00528 Binding-protein-dependent transport system inner membrane component AVL57_11985 PF13416 Bacterial extracellular solute-binding protein AVL57_11995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVL57_11995 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_12000 PF07715 TonB-dependent Receptor Plug Domain AVL57_12000 PF00593 TonB dependent receptor AVL57_12015 PF04055 Radical SAM superfamily AVL57_12015 PF11842 Domain of unknown function (DUF3362) AVL57_12015 PF08497 Radical SAM N-terminal AVL57_12040 PF00593 TonB dependent receptor AVL57_12040 PF07715 TonB-dependent Receptor Plug Domain AVL57_12045 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_12045 PF13192 Thioredoxin domain AVL57_12050 PF00578 AhpC/TSA family AVL57_12050 PF10417 C-terminal domain of 1-Cys peroxiredoxin AVL57_12075 PF00795 Carbon-nitrogen hydrolase AVL57_12075 PF00583 Acetyltransferase (GNAT) family AVL57_12085 PF12697 Alpha/beta hydrolase family AVL57_12090 PF08448 PAS fold AVL57_12090 PF00990 Diguanylate cyclase, GGDEF domain AVL57_12100 PF05987 Bacterial protein of unknown function (DUF898) AVL57_12105 PF00312 Ribosomal protein S15 AVL57_12110 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVL57_12110 PF16198 tRNA pseudouridylate synthase B C-terminal domain AVL57_12110 PF09157 Pseudouridine synthase II TruB, C-terminal AVL57_12115 PF02033 Ribosome-binding factor A AVL57_12120 PF00009 Elongation factor Tu GTP binding domain AVL57_12120 PF04760 Translation initiation factor IF-2, N-terminal region AVL57_12120 PF08364 Bacterial translation initiation factor IF-2 associated region AVL57_12120 PF11987 Translation-initiation factor 2 AVL57_12125 PF08529 NusA N-terminal domain AVL57_12125 PF00575 S1 RNA binding domain AVL57_12125 PF13184 NusA-like KH domain AVL57_12130 PF17384 RimP C-terminal SH3 domain AVL57_12130 PF02576 RimP N-terminal domain AVL57_12135 PF00072 Response regulator receiver domain AVL57_12140 PF00072 Response regulator receiver domain AVL57_12140 PF01627 Hpt domain AVL57_12140 PF00512 His Kinase A (phospho-acceptor) domain AVL57_12140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_12155 PF01329 Pterin 4 alpha carbinolamine dehydratase AVL57_12160 PF07715 TonB-dependent Receptor Plug Domain AVL57_12160 PF00593 TonB dependent receptor AVL57_12165 PF00924 Mechanosensitive ion channel AVL57_12185 PF05552 Conserved TM helix AVL57_12185 PF00924 Mechanosensitive ion channel AVL57_12190 PF01575 MaoC like domain AVL57_12195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_12195 PF03466 LysR substrate binding domain AVL57_12205 PF01232 Mannitol dehydrogenase Rossmann domain AVL57_12205 PF08125 Mannitol dehydrogenase C-terminal domain AVL57_12215 PF13419 Haloacid dehalogenase-like hydrolase AVL57_12220 PF04198 Putative sugar-binding domain AVL57_12235 PF00561 alpha/beta hydrolase fold AVL57_12240 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL57_12240 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL57_12240 PF02770 Acyl-CoA dehydrogenase, middle domain AVL57_12240 PF12806 Acetyl-CoA dehydrogenase C-terminal like AVL57_12245 PF02803 Thiolase, C-terminal domain AVL57_12245 PF00108 Thiolase, N-terminal domain AVL57_12250 PF00378 Enoyl-CoA hydratase/isomerase AVL57_12250 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AVL57_12250 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AVL57_12255 PF00561 alpha/beta hydrolase fold AVL57_12275 PF08240 Alcohol dehydrogenase GroES-like domain AVL57_12275 PF00107 Zinc-binding dehydrogenase AVL57_12285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL57_12285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL57_12285 PF02770 Acyl-CoA dehydrogenase, middle domain AVL57_12295 PF00593 TonB dependent receptor AVL57_12295 PF07715 TonB-dependent Receptor Plug Domain AVL57_12315 PF06969 HemN C-terminal domain AVL57_12315 PF04055 Radical SAM superfamily AVL57_12320 PF03459 TOBE domain AVL57_12320 PF00005 ABC transporter AVL57_12325 PF00528 Binding-protein-dependent transport system inner membrane component AVL57_12335 PF02391 MoaE protein AVL57_12340 PF02597 ThiS family AVL57_12345 PF01967 MoaC family AVL57_12350 PF00994 Probable molybdopterin binding domain AVL57_12355 PF00899 ThiF family AVL57_12575 PF00512 His Kinase A (phospho-acceptor) domain AVL57_12575 PF01627 Hpt domain AVL57_12575 PF00072 Response regulator receiver domain AVL57_12575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_12575 PF00672 HAMP domain AVL57_12575 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL57_12585 PF00155 Aminotransferase class I and II AVL57_12590 PF03435 Saccharopine dehydrogenase NADP binding domain AVL57_12605 PF00155 Aminotransferase class I and II AVL57_12620 PF13538 UvrD-like helicase C-terminal domain AVL57_12625 PF13361 UvrD-like helicase C-terminal domain AVL57_12625 PF00580 UvrD/REP helicase N-terminal domain AVL57_12625 PF12705 PD-(D/E)XK nuclease superfamily AVL57_12630 PF17946 RecC C-terminal domain AVL57_12640 PF00501 AMP-binding enzyme AVL57_12645 PF00990 Diguanylate cyclase, GGDEF domain AVL57_12645 PF03707 Bacterial signalling protein N terminal repeat AVL57_12645 PF00563 EAL domain AVL57_12650 PF12706 Beta-lactamase superfamily domain AVL57_12650 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVL57_12650 PF17770 Ribonuclease J C-terminal domain AVL57_12655 PF04337 Protein of unknown function, DUF480 AVL57_12670 PF03466 LysR substrate binding domain AVL57_12670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_12690 PF01022 Bacterial regulatory protein, arsR family AVL57_12700 PF03466 LysR substrate binding domain AVL57_12700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_12710 PF02954 Bacterial regulatory protein, Fis family AVL57_12710 PF00158 Sigma-54 interaction domain AVL57_12710 PF00072 Response regulator receiver domain AVL57_12720 PF00512 His Kinase A (phospho-acceptor) domain AVL57_12720 PF01590 GAF domain AVL57_12720 PF08446 PAS fold AVL57_12720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_12720 PF00360 Phytochrome region AVL57_12725 PF00072 Response regulator receiver domain AVL57_12730 PF00512 His Kinase A (phospho-acceptor) domain AVL57_12730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_12730 PF00072 Response regulator receiver domain AVL57_12730 PF09308 LuxQ, periplasmic AVL57_12760 PF07043 Protein of unknown function (DUF1328) AVL57_12780 PF07023 Protein of unknown function (DUF1315) AVL57_12790 PF01235 Sodium:alanine symporter family AVL57_12795 PF18027 Cytosolic carboxypeptidase N-terminal domain AVL57_12795 PF00246 Zinc carboxypeptidase AVL57_12800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVL57_12800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVL57_12810 PF01641 SelR domain AVL57_12815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVL57_12815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AVL57_12820 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVL57_12820 PF00128 Alpha amylase, catalytic domain AVL57_12825 PF00128 Alpha amylase, catalytic domain AVL57_12825 PF02806 Alpha amylase, C-terminal all-beta domain AVL57_12825 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVL57_12830 PF02446 4-alpha-glucanotransferase AVL57_12835 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVL57_12835 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVL57_12840 PF01263 Aldose 1-epimerase AVL57_12845 PF01081 KDPG and KHG aldolase AVL57_12850 PF02685 Glucokinase AVL57_12855 PF00920 Dehydratase family AVL57_12860 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AVL57_12865 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AVL57_12865 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AVL57_12870 PF01380 SIS domain AVL57_12870 PF01418 Helix-turn-helix domain, rpiR family AVL57_12875 PF00224 Pyruvate kinase, barrel domain AVL57_12875 PF02887 Pyruvate kinase, alpha/beta domain AVL57_12880 PF01048 Phosphorylase superfamily AVL57_12925 PF00672 HAMP domain AVL57_12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_12925 PF00512 His Kinase A (phospho-acceptor) domain AVL57_12930 PF00072 Response regulator receiver domain AVL57_12930 PF00486 Transcriptional regulatory protein, C terminal AVL57_12955 PF09347 Domain of unknown function (DUF1989) AVL57_12970 PF04962 KduI/IolB family AVL57_12975 PF03480 Bacterial extracellular solute-binding protein, family 7 AVL57_12985 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AVL57_12990 PF00356 Bacterial regulatory proteins, lacI family AVL57_12995 PF08666 SAF domain AVL57_12995 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AVL57_13000 PF02614 Glucuronate isomerase AVL57_13005 PF01232 Mannitol dehydrogenase Rossmann domain AVL57_13005 PF08125 Mannitol dehydrogenase C-terminal domain AVL57_13010 PF00294 pfkB family carbohydrate kinase AVL57_13015 PF13472 GDSL-like Lipase/Acylhydrolase family AVL57_13025 PF07470 Glycosyl Hydrolase Family 88 AVL57_13030 PF00295 Glycosyl hydrolases family 28 AVL57_13035 PF01095 Pectinesterase AVL57_13040 PF09456 RcsC Alpha-Beta-Loop (ABL) AVL57_13040 PF00072 Response regulator receiver domain AVL57_13040 PF00512 His Kinase A (phospho-acceptor) domain AVL57_13040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_13055 PF04231 Endonuclease I AVL57_13060 PF11838 ERAP1-like C-terminal domain AVL57_13060 PF01433 Peptidase family M1 domain AVL57_13065 PF00378 Enoyl-CoA hydratase/isomerase AVL57_13085 PF00356 Bacterial regulatory proteins, lacI family AVL57_13090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AVL57_13090 PF13378 Enolase C-terminal domain-like AVL57_13095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVL57_13095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVL57_13110 PF00563 EAL domain AVL57_13110 PF03707 Bacterial signalling protein N terminal repeat AVL57_13110 PF00990 Diguanylate cyclase, GGDEF domain AVL57_13125 PF12804 MobA-like NTP transferase domain AVL57_13135 PF01625 Peptide methionine sulfoxide reductase AVL57_13140 PF02566 OsmC-like protein AVL57_13150 PF00080 Copper/zinc superoxide dismutase (SODC) AVL57_13155 PF00990 Diguanylate cyclase, GGDEF domain AVL57_13155 PF05230 MASE2 domain AVL57_13165 PF00072 Response regulator receiver domain AVL57_13165 PF00486 Transcriptional regulatory protein, C terminal AVL57_13170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_13170 PF00672 HAMP domain AVL57_13170 PF00512 His Kinase A (phospho-acceptor) domain AVL57_13195 PF01979 Amidohydrolase family AVL57_13200 PF01156 Inosine-uridine preferring nucleoside hydrolase AVL57_13205 PF07690 Major Facilitator Superfamily AVL57_13210 PF02112 cAMP phosphodiesterases class-II AVL57_13215 PF01266 FAD dependent oxidoreductase AVL57_13230 PF00672 HAMP domain AVL57_13230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_13240 PF06628 Catalase-related immune-responsive AVL57_13240 PF00199 Catalase AVL57_13250 PF01145 SPFH domain / Band 7 family AVL57_13270 PF00881 Nitroreductase family AVL57_13290 PF00939 Sodium:sulfate symporter transmembrane region AVL57_13295 PF00692 dUTPase AVL57_13300 PF10609 NUBPL iron-transfer P-loop NTPase AVL57_13305 PF08264 Anticodon-binding domain of tRNA AVL57_13305 PF09334 tRNA synthetases class I (M) AVL57_13305 PF01588 Putative tRNA binding domain AVL57_13310 PF08241 Methyltransferase domain AVL57_13315 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVL57_13315 PF00753 Metallo-beta-lactamase superfamily AVL57_13320 PF01464 Transglycosylase SLT domain AVL57_13320 PF01476 LysM domain AVL57_13330 PF07715 TonB-dependent Receptor Plug Domain AVL57_13330 PF00593 TonB dependent receptor AVL57_13335 PF09190 DALR domain AVL57_13335 PF01406 tRNA synthetases class I (C) catalytic domain AVL57_13340 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVL57_13345 PF00149 Calcineurin-like phosphoesterase AVL57_13350 PF00245 Alkaline phosphatase AVL57_13355 PF00245 Alkaline phosphatase AVL57_13370 PF01145 SPFH domain / Band 7 family AVL57_13370 PF15975 Flotillin AVL57_13390 PF01434 Peptidase family M41 AVL57_13390 PF06480 FtsH Extracellular AVL57_13390 PF00004 ATPase family associated with various cellular activities (AAA) AVL57_13390 PF17862 AAA+ lid domain AVL57_13395 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AVL57_13395 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AVL57_13400 PF00941 FAD binding domain in molybdopterin dehydrogenase AVL57_13400 PF03450 CO dehydrogenase flavoprotein C-terminal domain AVL57_13405 PF01799 [2Fe-2S] binding domain AVL57_13405 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL57_13410 PF07940 Heparinase II/III-like protein AVL57_13410 PF05426 Alginate lyase AVL57_13415 PF00107 Zinc-binding dehydrogenase AVL57_13415 PF08240 Alcohol dehydrogenase GroES-like domain AVL57_13425 PF04336 Acyl carrier protein phosphodiesterase AVL57_13430 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AVL57_13440 PF00156 Phosphoribosyl transferase domain AVL57_13445 PF02674 Colicin V production protein AVL57_13450 PF05036 Sporulation related domain AVL57_13455 PF08245 Mur ligase middle domain AVL57_13455 PF02875 Mur ligase family, glutamate ligase domain AVL57_13460 PF01039 Carboxyl transferase domain AVL57_13460 PF17848 Acetyl-coA carboxylase zinc finger domain AVL57_13465 PF01416 tRNA pseudouridine synthase AVL57_13475 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVL57_13475 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVL57_13480 PF11890 Domain of unknown function (DUF3410) AVL57_13480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVL57_13480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVL57_13485 PF00596 Class II Aldolase and Adducin N-terminal domain AVL57_13495 PF02801 Beta-ketoacyl synthase, C-terminal domain AVL57_13495 PF00109 Beta-ketoacyl synthase, N-terminal domain AVL57_13500 PF08448 PAS fold AVL57_13500 PF00990 Diguanylate cyclase, GGDEF domain AVL57_13505 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AVL57_13505 PF01266 FAD dependent oxidoreductase AVL57_13535 PF04315 Elongation factor P hydroxylase AVL57_13555 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL57_13555 PF00175 Oxidoreductase NAD-binding domain AVL57_13555 PF00970 Oxidoreductase FAD-binding domain AVL57_13560 PF00487 Fatty acid desaturase AVL57_13570 PF06719 AraC-type transcriptional regulator N-terminus AVL57_13570 PF12833 Helix-turn-helix domain AVL57_13575 PF12146 Serine aminopeptidase, S33 AVL57_13600 PF00665 Integrase core domain AVL57_13600 PF13936 Helix-turn-helix domain AVL57_13605 PF00873 AcrB/AcrD/AcrF family AVL57_13610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL57_13610 PF00529 HlyD membrane-fusion protein of T1SS AVL57_13625 PF16916 Dimerisation domain of Zinc Transporter AVL57_13625 PF01545 Cation efflux family AVL57_13640 PF13411 MerR HTH family regulatory protein AVL57_13665 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_13665 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL57_13670 PF00378 Enoyl-CoA hydratase/isomerase AVL57_13675 PF00440 Bacterial regulatory proteins, tetR family AVL57_13675 PF02909 Tetracyclin repressor-like, C-terminal domain AVL57_13680 PF05199 GMC oxidoreductase AVL57_13680 PF00732 GMC oxidoreductase AVL57_13690 PF06974 Protein of unknown function (DUF1298) AVL57_13690 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AVL57_13695 PF00440 Bacterial regulatory proteins, tetR family AVL57_13700 PF04286 Protein of unknown function (DUF445) AVL57_13730 PF00326 Prolyl oligopeptidase family AVL57_13730 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AVL57_13735 PF07840 FadR C-terminal domain AVL57_13735 PF00392 Bacterial regulatory proteins, gntR family AVL57_13740 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AVL57_13745 PF02600 Disulfide bond formation protein DsbB AVL57_13750 PF13302 Acetyltransferase (GNAT) domain AVL57_13755 PF03692 Putative zinc- or iron-chelating domain AVL57_13760 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVL57_13770 PF05166 YcgL domain AVL57_13775 PF00570 HRDC domain AVL57_13775 PF01612 3'-5' exonuclease AVL57_13780 PF13193 AMP-binding enzyme C-terminal domain AVL57_13780 PF00501 AMP-binding enzyme AVL57_13785 PF12697 Alpha/beta hydrolase family AVL57_13800 PF00814 Glycoprotease family AVL57_13805 PF13307 Helicase C-terminal domain AVL57_13805 PF06733 DEAD_2 AVL57_13810 PF00128 Alpha amylase, catalytic domain AVL57_13860 PF08029 HisG, C-terminal domain AVL57_13860 PF01634 ATP phosphoribosyltransferase AVL57_13865 PF00815 Histidinol dehydrogenase AVL57_13870 PF00155 Aminotransferase class I and II AVL57_13875 PF00475 Imidazoleglycerol-phosphate dehydratase AVL57_13880 PF00117 Glutamine amidotransferase class-I AVL57_13885 PF00977 Histidine biosynthesis protein AVL57_13890 PF00977 Histidine biosynthesis protein AVL57_13895 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AVL57_13895 PF01502 Phosphoribosyl-AMP cyclohydrolase AVL57_13905 PF00106 short chain dehydrogenase AVL57_13915 PF00501 AMP-binding enzyme AVL57_13925 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AVL57_13935 PF00535 Glycosyl transferase family 2 AVL57_13955 PF00512 His Kinase A (phospho-acceptor) domain AVL57_13955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_13955 PF08521 Two-component sensor kinase N-terminal AVL57_13960 PF00072 Response regulator receiver domain AVL57_13960 PF00486 Transcriptional regulatory protein, C terminal AVL57_13965 PF00753 Metallo-beta-lactamase superfamily AVL57_13970 PF10502 Signal peptidase, peptidase S26 AVL57_13975 PF00593 TonB dependent receptor AVL57_13975 PF07715 TonB-dependent Receptor Plug Domain AVL57_13985 PF05191 Adenylate kinase, active site lid AVL57_13990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_13990 PF00183 Hsp90 protein AVL57_13995 PF02132 RecR protein AVL57_13995 PF13662 Toprim domain AVL57_14015 PF02575 YbaB/EbfC DNA-binding family AVL57_14020 PF12170 DNA polymerase III tau subunit V interacting with alpha AVL57_14020 PF12169 DNA polymerase III subunits gamma and tau domain III AVL57_14025 PF00156 Phosphoribosyl transferase domain AVL57_14035 PF05114 Protein of unknown function (DUF692) AVL57_14045 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AVL57_14045 PF00400 WD domain, G-beta repeat AVL57_14060 PF00360 Phytochrome region AVL57_14060 PF00990 Diguanylate cyclase, GGDEF domain AVL57_14060 PF01590 GAF domain AVL57_14060 PF00563 EAL domain AVL57_14095 PF01066 CDP-alcohol phosphatidyltransferase AVL57_14115 PF02861 Clp amino terminal domain, pathogenicity island component AVL57_14115 PF10431 C-terminal, D2-small domain, of ClpB protein AVL57_14115 PF00004 ATPase family associated with various cellular activities (AAA) AVL57_14115 PF07724 AAA domain (Cdc48 subfamily) AVL57_14115 PF17871 AAA lid domain AVL57_14125 PF00849 RNA pseudouridylate synthase AVL57_14125 PF01479 S4 domain AVL57_14130 PF13525 Outer membrane lipoprotein AVL57_14140 PF04542 Sigma-70 region 2 AVL57_14140 PF04545 Sigma-70, region 4 AVL57_14155 PF00106 short chain dehydrogenase AVL57_14175 PF13677 Membrane MotB of proton-channel complex MotA/MotB AVL57_14175 PF00691 OmpA family AVL57_14180 PF01618 MotA/TolQ/ExbB proton channel family AVL57_14185 PF02609 Exonuclease VII small subunit AVL57_14190 PF00348 Polyprenyl synthetase AVL57_14195 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AVL57_14195 PF02780 Transketolase, C-terminal domain AVL57_14195 PF02779 Transketolase, pyrimidine binding domain AVL57_14200 PF04608 Phosphatidylglycerophosphatase A AVL57_14205 PF02769 AIR synthase related protein, C-terminal domain AVL57_14205 PF00586 AIR synthase related protein, N-terminal domain AVL57_14210 PF01029 NusB family AVL57_14215 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVL57_14220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVL57_14220 PF00925 GTP cyclohydrolase II AVL57_14225 PF00677 Lumazine binding domain AVL57_14230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVL57_14230 PF01872 RibD C-terminal domain AVL57_14235 PF03477 ATP cone domain AVL57_14240 PF00464 Serine hydroxymethyltransferase AVL57_14245 PF00132 Bacterial transferase hexapeptide (six repeats) AVL57_14245 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AVL57_14245 PF14602 Hexapeptide repeat of succinyl-transferase AVL57_14250 PF12848 ABC transporter AVL57_14250 PF00005 ABC transporter AVL57_14260 PF18073 Rubredoxin metal binding domain AVL57_14270 PF18429 Domain of unknown function (DUF5609) AVL57_14280 PF01026 TatD related DNase AVL57_14285 PF01243 Pyridoxamine 5'-phosphate oxidase AVL57_14285 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AVL57_14290 PF01926 50S ribosome-binding GTPase AVL57_14290 PF07650 KH domain AVL57_14295 PF00035 Double-stranded RNA binding motif AVL57_14295 PF14622 Ribonuclease-III-like AVL57_14300 PF10502 Signal peptidase, peptidase S26 AVL57_14305 PF03144 Elongation factor Tu domain 2 AVL57_14305 PF06421 GTP-binding protein LepA C-terminus AVL57_14305 PF00679 Elongation factor G C-terminus AVL57_14305 PF00009 Elongation factor Tu GTP binding domain AVL57_14315 PF17188 MucB/RseB C-terminal domain AVL57_14315 PF03888 MucB/RseB N-terminal domain AVL57_14325 PF04542 Sigma-70 region 2 AVL57_14325 PF08281 Sigma-70, region 4 AVL57_14330 PF02910 Fumarate reductase flavoprotein C-term AVL57_14330 PF00890 FAD binding domain AVL57_14345 PF03937 Flavinator of succinate dehydrogenase AVL57_14355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVL57_14360 PF00543 Nitrogen regulatory protein P-II AVL57_14365 PF02540 NAD synthase AVL57_14375 PF00114 Pilin (bacterial filament) AVL57_14375 PF07963 Prokaryotic N-terminal methylation motif AVL57_14425 PF02401 LytB protein AVL57_14430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVL57_14435 PF01252 Signal peptidase (SPase) II AVL57_14440 PF08264 Anticodon-binding domain of tRNA AVL57_14440 PF00133 tRNA synthetases class I (I, L, M and V) AVL57_14440 PF06827 Zinc finger found in FPG and IleRS AVL57_14445 PF06574 FAD synthetase AVL57_14445 PF01687 Riboflavin kinase AVL57_14450 PF03023 Lipid II flippase MurJ AVL57_14455 PF01649 Ribosomal protein S20 AVL57_14460 PF00106 short chain dehydrogenase AVL57_14475 PF01758 Sodium Bile acid symporter family AVL57_14480 PF03466 LysR substrate binding domain AVL57_14480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_14495 PF01546 Peptidase family M20/M25/M40 AVL57_14495 PF07687 Peptidase dimerisation domain AVL57_14505 PF00216 Bacterial DNA-binding protein AVL57_14510 PF02190 ATP-dependent protease La (LON) substrate-binding domain AVL57_14510 PF05362 Lon protease (S16) C-terminal proteolytic domain AVL57_14510 PF00004 ATPase family associated with various cellular activities (AAA) AVL57_14515 PF07724 AAA domain (Cdc48 subfamily) AVL57_14515 PF06689 ClpX C4-type zinc finger AVL57_14515 PF10431 C-terminal, D2-small domain, of ClpB protein AVL57_14520 PF00574 Clp protease AVL57_14525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVL57_14525 PF05697 Bacterial trigger factor protein (TF) AVL57_14525 PF05698 Bacterial trigger factor protein (TF) C-terminus AVL57_14555 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVL57_14555 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVL57_14565 PF01980 tRNA-methyltransferase O AVL57_14565 PF18389 TrmO C-terminal domain AVL57_14570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVL57_14570 PF03129 Anticodon binding domain AVL57_14580 PF02253 Phospholipase A1 AVL57_14585 PF00850 Histone deacetylase domain AVL57_14590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_14590 PF02743 Cache domain AVL57_14590 PF00672 HAMP domain AVL57_14600 PF00958 GMP synthase C terminal domain AVL57_14600 PF00117 Glutamine amidotransferase class-I AVL57_14600 PF02540 NAD synthase AVL57_14605 PF00571 CBS domain AVL57_14605 PF00478 IMP dehydrogenase / GMP reductase domain AVL57_14610 PF13742 OB-fold nucleic acid binding domain AVL57_14610 PF02601 Exonuclease VII, large subunit AVL57_14620 PF01926 50S ribosome-binding GTPase AVL57_14620 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVL57_14625 PF13360 PQQ-like domain AVL57_14630 PF09976 Tetratricopeptide repeat-like domain AVL57_14635 PF13393 Histidyl-tRNA synthetase AVL57_14635 PF03129 Anticodon binding domain AVL57_14640 PF04551 GcpE protein AVL57_14645 PF13464 Domain of unknown function (DUF4115) AVL57_14655 PF04055 Radical SAM superfamily AVL57_14660 PF00334 Nucleoside diphosphate kinase AVL57_14665 PF02657 Fe-S metabolism associated domain AVL57_14670 PF01883 Iron-sulfur cluster assembly protein AVL57_14675 PF01521 Iron-sulphur cluster biosynthesis AVL57_14680 PF00266 Aminotransferase class-V AVL57_14685 PF01458 Uncharacterized protein family (UPF0051) AVL57_14690 PF00005 ABC transporter AVL57_14695 PF01458 Uncharacterized protein family (UPF0051) AVL57_14700 PF00266 Aminotransferase class-V AVL57_14705 PF02082 Transcriptional regulator AVL57_14710 PF00132 Bacterial transferase hexapeptide (six repeats) AVL57_14715 PF00588 SpoU rRNA Methylase family AVL57_14720 PF00459 Inositol monophosphatase family AVL57_14735 PF00990 Diguanylate cyclase, GGDEF domain AVL57_14735 PF00563 EAL domain AVL57_14735 PF03707 Bacterial signalling protein N terminal repeat AVL57_14750 PF07549 SecD/SecF GG Motif AVL57_14750 PF02355 Protein export membrane protein AVL57_14755 PF07549 SecD/SecF GG Motif AVL57_14755 PF02355 Protein export membrane protein AVL57_14755 PF13721 SecD export protein N-terminal TM region AVL57_14760 PF02699 Preprotein translocase subunit AVL57_14765 PF01702 Queuine tRNA-ribosyltransferase AVL57_14770 PF02547 Queuosine biosynthesis protein AVL57_14780 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) AVL57_14785 PF04012 PspA/IM30 family AVL57_14810 PF03738 Glutathionylspermidine synthase preATP-grasp AVL57_14825 PF04960 Glutaminase AVL57_14830 PF00245 Alkaline phosphatase AVL57_14835 PF00072 Response regulator receiver domain AVL57_14840 PF00463 Isocitrate lyase family AVL57_14845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_14845 PF03466 LysR substrate binding domain AVL57_14850 PF01274 Malate synthase AVL57_14860 PF01370 NAD dependent epimerase/dehydratase family AVL57_14885 PF00899 ThiF family AVL57_14890 PF00132 Bacterial transferase hexapeptide (six repeats) AVL57_14895 PF03170 Bacterial cellulose synthase subunit AVL57_14895 PF03552 Cellulose synthase AVL57_14895 PF07238 PilZ domain AVL57_14895 PF00535 Glycosyl transferase family 2 AVL57_14910 PF00534 Glycosyl transferases group 1 AVL57_14910 PF13439 Glycosyltransferase Family 4 AVL57_14915 PF13439 Glycosyltransferase Family 4 AVL57_14915 PF00534 Glycosyl transferases group 1 AVL57_14960 PF00535 Glycosyl transferase family 2 AVL57_14980 PF02397 Bacterial sugar transferase AVL57_14995 PF13614 AAA domain AVL57_15005 PF01471 Putative peptidoglycan binding domain AVL57_15005 PF13401 AAA domain AVL57_15010 PF01467 Cytidylyltransferase-like AVL57_15010 PF00294 pfkB family carbohydrate kinase AVL57_15015 PF01541 GIY-YIG catalytic domain AVL57_15025 PF08335 GlnD PII-uridylyltransferase AVL57_15025 PF03710 Glutamate-ammonia ligase adenylyltransferase AVL57_15035 PF03279 Bacterial lipid A biosynthesis acyltransferase AVL57_15065 PF09317 Domain of unknown function (DUF1974) AVL57_15065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL57_15065 PF02770 Acyl-CoA dehydrogenase, middle domain AVL57_15065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AVL57_15075 PF00563 EAL domain AVL57_15075 PF00990 Diguanylate cyclase, GGDEF domain AVL57_15075 PF03707 Bacterial signalling protein N terminal repeat AVL57_15080 PF00265 Thymidine kinase AVL57_15090 PF00356 Bacterial regulatory proteins, lacI family AVL57_15135 PF01926 50S ribosome-binding GTPase AVL57_15140 PF00588 SpoU rRNA Methylase family AVL57_15140 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVL57_15145 PF00037 4Fe-4S binding domain AVL57_15145 PF11953 Domain of unknown function (DUF3470) AVL57_15175 PF03793 PASTA domain AVL57_15175 PF00069 Protein kinase domain AVL57_15210 PF00593 TonB dependent receptor AVL57_15210 PF07715 TonB-dependent Receptor Plug Domain AVL57_15220 PF07715 TonB-dependent Receptor Plug Domain AVL57_15220 PF07660 Secretin and TonB N terminus short domain AVL57_15220 PF00593 TonB dependent receptor AVL57_15240 PF07715 TonB-dependent Receptor Plug Domain AVL57_15245 PF05360 yiaA/B two helix domain AVL57_15260 PF05971 RNA methyltransferase AVL57_15265 PF09278 MerR, DNA binding AVL57_15265 PF00376 MerR family regulatory protein AVL57_15280 PF08443 RimK-like ATP-grasp domain AVL57_15280 PF18030 RimK PreATP-grasp domain AVL57_15290 PF00246 Zinc carboxypeptidase AVL57_15295 PF00483 Nucleotidyl transferase AVL57_15335 PF02770 Acyl-CoA dehydrogenase, middle domain AVL57_15335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AVL57_15335 PF18158 Adaptive response protein AidB N-terminal domain AVL57_15345 PF01244 Membrane dipeptidase (Peptidase family M19) AVL57_15350 PF00593 TonB dependent receptor AVL57_15350 PF07660 Secretin and TonB N terminus short domain AVL57_15350 PF07715 TonB-dependent Receptor Plug Domain AVL57_15360 PF01738 Dienelactone hydrolase family AVL57_15365 PF00578 AhpC/TSA family AVL57_15375 PF03969 AFG1-like ATPase AVL57_15400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVL57_15410 PF00881 Nitroreductase family AVL57_15415 PF12633 Adenylate cyclase NT domain AVL57_15415 PF01295 Adenylate cyclase, class-I AVL57_15425 PF03061 Thioesterase superfamily AVL57_15430 PF12392 Collagenase AVL57_15430 PF01136 Peptidase family U32 AVL57_15465 PF00128 Alpha amylase, catalytic domain AVL57_15470 PF07690 Major Facilitator Superfamily AVL57_15485 PF00266 Aminotransferase class-V AVL57_15495 PF03466 LysR substrate binding domain AVL57_15495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_15505 PF01593 Flavin containing amine oxidoreductase AVL57_15515 PF01638 HxlR-like helix-turn-helix AVL57_15520 PF03965 Penicillinase repressor AVL57_15530 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVL57_15535 PF11838 ERAP1-like C-terminal domain AVL57_15535 PF01433 Peptidase family M1 domain AVL57_15575 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVL57_15575 PF06481 COX Aromatic Rich Motif AVL57_15580 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVL57_15585 PF00510 Cytochrome c oxidase subunit III AVL57_15590 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AVL57_15595 PF01040 UbiA prenyltransferase family AVL57_15610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_15610 PF03466 LysR substrate binding domain AVL57_15620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_15620 PF03466 LysR substrate binding domain AVL57_15625 PF00106 short chain dehydrogenase AVL57_15630 PF01965 DJ-1/PfpI family AVL57_15640 PF00743 Flavin-binding monooxygenase-like AVL57_15645 PF00743 Flavin-binding monooxygenase-like AVL57_15650 PF00561 alpha/beta hydrolase fold AVL57_15675 PF00694 Aconitase C-terminal domain AVL57_15680 PF00330 Aconitase family (aconitate hydratase) AVL57_15685 PF00857 Isochorismatase family AVL57_15690 PF02538 Hydantoinase B/oxoprolinase AVL57_15695 PF01968 Hydantoinase/oxoprolinase AVL57_15695 PF05378 Hydantoinase/oxoprolinase N-terminal region AVL57_15700 PF00682 HMGL-like AVL57_15705 PF02515 CoA-transferase family III AVL57_15710 PF07715 TonB-dependent Receptor Plug Domain AVL57_15710 PF00593 TonB dependent receptor AVL57_15715 PF00158 Sigma-54 interaction domain AVL57_15715 PF06506 Propionate catabolism activator AVL57_15715 PF02954 Bacterial regulatory protein, Fis family AVL57_15725 PF00593 TonB dependent receptor AVL57_15725 PF07715 TonB-dependent Receptor Plug Domain AVL57_15745 PF13533 Biotin-lipoyl like AVL57_15750 PF01047 MarR family AVL57_15755 PF17755 UvrA DNA-binding domain AVL57_15760 PF03631 Virulence factor BrkB AVL57_15770 PF09382 RQC domain AVL57_15770 PF16124 RecQ zinc-binding AVL57_15770 PF00570 HRDC domain AVL57_15770 PF00271 Helicase conserved C-terminal domain AVL57_15770 PF00270 DEAD/DEAH box helicase AVL57_15775 PF07152 YaeQ protein AVL57_15795 PF03466 LysR substrate binding domain AVL57_15795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_15805 PF00226 DnaJ domain AVL57_15805 PF01556 DnaJ C terminal domain AVL57_15810 PF00042 Globin AVL57_15810 PF00175 Oxidoreductase NAD-binding domain AVL57_15810 PF00970 Oxidoreductase FAD-binding domain AVL57_15825 PF00158 Sigma-54 interaction domain AVL57_15825 PF01590 GAF domain AVL57_15850 PF00400 WD domain, G-beta repeat AVL57_15850 PF12894 Anaphase-promoting complex subunit 4 WD40 domain AVL57_15865 PF00155 Aminotransferase class I and II AVL57_15865 PF00392 Bacterial regulatory proteins, gntR family AVL57_15885 PF01863 Protein of unknown function DUF45 AVL57_15900 PF02810 SEC-C motif AVL57_15900 PF07517 SecA DEAD-like domain AVL57_15900 PF01043 SecA preprotein cross-linking domain AVL57_15900 PF07516 SecA Wing and Scaffold domain AVL57_15935 PF07995 Glucose / Sorbosone dehydrogenase AVL57_15940 PF12852 Cupin AVL57_15940 PF12833 Helix-turn-helix domain AVL57_15945 PF00892 EamA-like transporter family AVL57_15950 PF00271 Helicase conserved C-terminal domain AVL57_15950 PF00270 DEAD/DEAH box helicase AVL57_16000 PF07690 Major Facilitator Superfamily AVL57_16010 PF00248 Aldo/keto reductase family AVL57_16025 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVL57_16025 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVL57_16065 PF01597 Glycine cleavage H-protein AVL57_16070 PF08669 Glycine cleavage T-protein C-terminal barrel domain AVL57_16070 PF01571 Aminomethyltransferase folate-binding domain AVL57_16075 PF03466 LysR substrate binding domain AVL57_16075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_16085 PF00356 Bacterial regulatory proteins, lacI family AVL57_16085 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AVL57_16090 PF01306 LacY proton/sugar symporter AVL57_16095 PF08244 Glycosyl hydrolases family 32 C terminal AVL57_16095 PF00251 Glycosyl hydrolases family 32 N-terminal domain AVL57_16100 PF00083 Sugar (and other) transporter AVL57_16110 PF00593 TonB dependent receptor AVL57_16110 PF07715 TonB-dependent Receptor Plug Domain AVL57_16115 PF03150 Di-haem cytochrome c peroxidase AVL57_16120 PF00557 Metallopeptidase family M24 AVL57_16120 PF01321 Creatinase/Prolidase N-terminal domain AVL57_16135 PF01494 FAD binding domain AVL57_16140 PF01494 FAD binding domain AVL57_16145 PF05195 Aminopeptidase P, N-terminal domain AVL57_16145 PF00557 Metallopeptidase family M24 AVL57_16150 PF03695 Uncharacterised protein family (UPF0149) AVL57_16160 PF00294 pfkB family carbohydrate kinase AVL57_16165 PF01156 Inosine-uridine preferring nucleoside hydrolase AVL57_16170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_16170 PF00512 His Kinase A (phospho-acceptor) domain AVL57_16170 PF00989 PAS fold AVL57_16170 PF13188 PAS domain AVL57_16175 PF01812 5-formyltetrahydrofolate cyclo-ligase family AVL57_16180 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVL57_16185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVL57_16185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVL57_16185 PF01842 ACT domain AVL57_16205 PF06945 Protein of unknown function (DUF1289) AVL57_16225 PF00873 AcrB/AcrD/AcrF family AVL57_16230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL57_16235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_16235 PF03466 LysR substrate binding domain AVL57_16245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVL57_16245 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_16250 PF02817 e3 binding domain AVL57_16250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVL57_16250 PF00364 Biotin-requiring enzyme AVL57_16255 PF00456 Transketolase, thiamine diphosphate binding domain AVL57_16255 PF17831 Pyruvate dehydrogenase E1 component middle domain AVL57_16260 PF07729 FCD domain AVL57_16260 PF00392 Bacterial regulatory proteins, gntR family AVL57_16270 PF01510 N-acetylmuramoyl-L-alanine amidase AVL57_16280 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AVL57_16280 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AVL57_16285 PF07963 Prokaryotic N-terminal methylation motif AVL57_16290 PF00482 Type II secretion system (T2SS), protein F AVL57_16295 PF06750 Bacterial Peptidase A24 N-terminal domain AVL57_16295 PF01478 Type IV leader peptidase family AVL57_16300 PF01121 Dephospho-CoA kinase AVL57_16305 PF07072 Cell division protein AVL57_16315 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AVL57_16320 PF00293 NUDIX domain AVL57_16325 PF07516 SecA Wing and Scaffold domain AVL57_16325 PF01043 SecA preprotein cross-linking domain AVL57_16325 PF07517 SecA DEAD-like domain AVL57_16325 PF02810 SEC-C motif AVL57_16330 PF01476 LysM domain AVL57_16330 PF01551 Peptidase family M23 AVL57_16330 PF08525 Opacity-associated protein A N-terminal motif AVL57_16335 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AVL57_16340 PF00091 Tubulin/FtsZ family, GTPase domain AVL57_16340 PF12327 FtsZ family, C-terminal domain AVL57_16345 PF02491 SHS2 domain inserted in FTSA AVL57_16350 PF08478 POTRA domain, FtsQ-type AVL57_16350 PF03799 Cell division protein FtsQ AVL57_16355 PF01820 D-ala D-ala ligase N-terminus AVL57_16355 PF07478 D-ala D-ala ligase C-terminus AVL57_16360 PF08245 Mur ligase middle domain AVL57_16360 PF01225 Mur ligase family, catalytic domain AVL57_16360 PF02875 Mur ligase family, glutamate ligase domain AVL57_16365 PF03033 Glycosyltransferase family 28 N-terminal domain AVL57_16365 PF04101 Glycosyltransferase family 28 C-terminal domain AVL57_16370 PF01098 Cell cycle protein AVL57_16375 PF02875 Mur ligase family, glutamate ligase domain AVL57_16375 PF08245 Mur ligase middle domain AVL57_16380 PF00953 Glycosyl transferase family 4 AVL57_16380 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AVL57_16385 PF01225 Mur ligase family, catalytic domain AVL57_16385 PF08245 Mur ligase middle domain AVL57_16385 PF02875 Mur ligase family, glutamate ligase domain AVL57_16390 PF01225 Mur ligase family, catalytic domain AVL57_16390 PF02875 Mur ligase family, glutamate ligase domain AVL57_16390 PF08245 Mur ligase middle domain AVL57_16395 PF00905 Penicillin binding protein transpeptidase domain AVL57_16395 PF03717 Penicillin-binding Protein dimerisation domain AVL57_16400 PF04999 Cell division protein FtsL AVL57_16405 PF01795 MraW methylase family AVL57_16410 PF02381 MraZ protein, putative antitoxin-like AVL57_16420 PF01244 Membrane dipeptidase (Peptidase family M19) AVL57_16425 PF00873 AcrB/AcrD/AcrF family AVL57_16430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AVL57_16450 PF00462 Glutaredoxin AVL57_16450 PF08534 Redoxin AVL57_16455 PF00990 Diguanylate cyclase, GGDEF domain AVL57_16455 PF00360 Phytochrome region AVL57_16455 PF00563 EAL domain AVL57_16455 PF01590 GAF domain AVL57_16465 PF02954 Bacterial regulatory protein, Fis family AVL57_16465 PF00072 Response regulator receiver domain AVL57_16465 PF00158 Sigma-54 interaction domain AVL57_16470 PF00072 Response regulator receiver domain AVL57_16470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_16470 PF00512 His Kinase A (phospho-acceptor) domain AVL57_16470 PF00989 PAS fold AVL57_16470 PF18415 Histidine kinase receptor ArcB trans-membrane domain AVL57_16470 PF01627 Hpt domain AVL57_16475 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVL57_16475 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVL57_16490 PF05552 Conserved TM helix AVL57_16490 PF00924 Mechanosensitive ion channel AVL57_16495 PF04452 RNA methyltransferase AVL57_16500 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AVL57_16500 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AVL57_16505 PF02622 Uncharacterized ACR, COG1678 AVL57_16510 PF03652 Holliday junction resolvase AVL57_16520 PF00437 Type II/IV secretion system protein AVL57_16525 PF00437 Type II/IV secretion system protein AVL57_16530 PF01168 Alanine racemase, N-terminal domain AVL57_16535 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVL57_16535 PF03807 NADP oxidoreductase coenzyme F420-dependent AVL57_16540 PF02325 YGGT family AVL57_16555 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL57_16555 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_16565 PF08787 Alginate lyase AVL57_16570 PF01588 Putative tRNA binding domain AVL57_16575 PF00043 Glutathione S-transferase, C-terminal domain AVL57_16575 PF02798 Glutathione S-transferase, N-terminal domain AVL57_16580 PF03883 Peroxide stress protein YaaA AVL57_16585 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVL57_16590 PF00342 Phosphoglucose isomerase AVL57_16595 PF03167 Uracil DNA glycosylase superfamily AVL57_16600 PF00291 Pyridoxal-phosphate dependent enzyme AVL57_16600 PF14821 Threonine synthase N terminus AVL57_16605 PF08544 GHMP kinases C terminal AVL57_16605 PF00288 GHMP kinases N terminal domain AVL57_16610 PF03447 Homoserine dehydrogenase, NAD binding domain AVL57_16610 PF13840 ACT domain AVL57_16610 PF01842 ACT domain AVL57_16610 PF00696 Amino acid kinase family AVL57_16610 PF00742 Homoserine dehydrogenase AVL57_16615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_16615 PF03466 LysR substrate binding domain AVL57_16620 PF00107 Zinc-binding dehydrogenase AVL57_16620 PF08240 Alcohol dehydrogenase GroES-like domain AVL57_16625 PF00196 Bacterial regulatory proteins, luxR family AVL57_16625 PF00072 Response regulator receiver domain AVL57_16630 PF07730 Histidine kinase AVL57_16630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_16650 PF01022 Bacterial regulatory protein, arsR family AVL57_16660 PF03358 NADPH-dependent FMN reductase AVL57_16665 PF01758 Sodium Bile acid symporter family AVL57_16670 PF00072 Response regulator receiver domain AVL57_16675 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AVL57_16680 PF00072 Response regulator receiver domain AVL57_16680 PF00486 Transcriptional regulatory protein, C terminal AVL57_16685 PF00512 His Kinase A (phospho-acceptor) domain AVL57_16685 PF16736 Single Cache-like AVL57_16685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_16685 PF00989 PAS fold AVL57_16710 PF16653 Saccharopine dehydrogenase C-terminal domain AVL57_16710 PF03435 Saccharopine dehydrogenase NADP binding domain AVL57_16715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVL57_16725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVL57_16730 PF04348 LppC putative lipoprotein AVL57_16735 PF02021 Uncharacterised protein family UPF0102 AVL57_16740 PF13580 SIS domain AVL57_16745 PF04972 BON domain AVL57_16750 PF07690 Major Facilitator Superfamily AVL57_16785 PF00893 Small Multidrug Resistance protein AVL57_16790 PF07730 Histidine kinase AVL57_16795 PF00072 Response regulator receiver domain AVL57_16795 PF00196 Bacterial regulatory proteins, luxR family AVL57_16800 PF07715 TonB-dependent Receptor Plug Domain AVL57_16800 PF00593 TonB dependent receptor AVL57_16815 PF00285 Citrate synthase, C-terminal domain AVL57_16820 PF00330 Aconitase family (aconitate hydratase) AVL57_16820 PF00694 Aconitase C-terminal domain AVL57_16825 PF04303 PrpF protein AVL57_16830 PF00990 Diguanylate cyclase, GGDEF domain AVL57_16840 PF13660 Domain of unknown function (DUF4147) AVL57_16840 PF05161 MOFRL family AVL57_16845 PF00474 Sodium:solute symporter family AVL57_16850 PF00593 TonB dependent receptor AVL57_16850 PF07715 TonB-dependent Receptor Plug Domain AVL57_16875 PF00989 PAS fold AVL57_16875 PF00072 Response regulator receiver domain AVL57_16875 PF01627 Hpt domain AVL57_16875 PF18415 Histidine kinase receptor ArcB trans-membrane domain AVL57_16875 PF00512 His Kinase A (phospho-acceptor) domain AVL57_16875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_16880 PF01645 Conserved region in glutamate synthase AVL57_16880 PF04898 Glutamate synthase central domain AVL57_16880 PF01493 GXGXG motif AVL57_16880 PF00310 Glutamine amidotransferases class-II AVL57_16885 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AVL57_16885 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_16895 PF01381 Helix-turn-helix AVL57_16920 PF00544 Pectate lyase AVL57_16935 PF01048 Phosphorylase superfamily AVL57_16950 PF00581 Rhodanese-like domain AVL57_16970 PF04225 Opacity-associated protein A LysM-like domain AVL57_16970 PF01551 Peptidase family M23 AVL57_16975 PF03702 Anhydro-N-acetylmuramic acid kinase AVL57_16985 PF07690 Major Facilitator Superfamily AVL57_16990 PF04966 Carbohydrate-selective porin, OprB family AVL57_16995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVL57_17005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVL57_17010 PF13417 Glutathione S-transferase, N-terminal domain AVL57_17010 PF00043 Glutathione S-transferase, C-terminal domain AVL57_17015 PF01521 Iron-sulphur cluster biosynthesis AVL57_17020 PF03976 Polyphosphate kinase 2 (PPK2) AVL57_17025 PF03776 Septum formation topological specificity factor MinE AVL57_17030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVL57_17035 PF03775 Septum formation inhibitor MinC, C-terminal domain AVL57_17035 PF05209 Septum formation inhibitor MinC, N-terminal domain AVL57_17040 PF00206 Lyase AVL57_17040 PF10415 Fumarase C C-terminus AVL57_17075 PF01566 Natural resistance-associated macrophage protein AVL57_17080 PF00155 Aminotransferase class I and II AVL57_17085 PF00072 Response regulator receiver domain AVL57_17085 PF13188 PAS domain AVL57_17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_17085 PF08448 PAS fold AVL57_17085 PF00512 His Kinase A (phospho-acceptor) domain AVL57_17100 PF03951 Glutamine synthetase, beta-Grasp domain AVL57_17100 PF00120 Glutamine synthetase, catalytic domain AVL57_17110 PF00989 PAS fold AVL57_17110 PF00512 His Kinase A (phospho-acceptor) domain AVL57_17110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_17115 PF00158 Sigma-54 interaction domain AVL57_17115 PF00072 Response regulator receiver domain AVL57_17115 PF02954 Bacterial regulatory protein, Fis family AVL57_17120 PF00072 Response regulator receiver domain AVL57_17125 PF01553 Acyltransferase AVL57_17130 PF06877 Regulator of ribonuclease activity B AVL57_17140 PF00990 Diguanylate cyclase, GGDEF domain AVL57_17140 PF17158 Membrane-associated sensor, integral membrane domain AVL57_17150 PF00672 HAMP domain AVL57_17150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_17150 PF01627 Hpt domain AVL57_17150 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AVL57_17150 PF00512 His Kinase A (phospho-acceptor) domain AVL57_17150 PF00072 Response regulator receiver domain AVL57_17155 PF08264 Anticodon-binding domain of tRNA AVL57_17155 PF00133 tRNA synthetases class I (I, L, M and V) AVL57_17155 PF10458 Valyl tRNA synthetase tRNA binding arm AVL57_17160 PF04364 DNA polymerase III chi subunit, HolC AVL57_17165 PF00883 Cytosol aminopeptidase family, catalytic domain AVL57_17165 PF02789 Cytosol aminopeptidase family, N-terminal domain AVL57_17170 PF03739 Lipopolysaccharide export system permease LptF/LptG AVL57_17175 PF03739 Lipopolysaccharide export system permease LptF/LptG AVL57_17185 PF04545 Sigma-70, region 4 AVL57_17185 PF04542 Sigma-70 region 2 AVL57_17220 PF04183 IucA / IucC family AVL57_17220 PF06276 Ferric iron reductase FhuF-like transporter AVL57_17225 PF04183 IucA / IucC family AVL57_17225 PF06276 Ferric iron reductase FhuF-like transporter AVL57_17230 PF00501 AMP-binding enzyme AVL57_17230 PF13193 AMP-binding enzyme C-terminal domain AVL57_17240 PF01261 Xylose isomerase-like TIM barrel AVL57_17255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVL57_17255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVL57_17300 PF05736 OprF membrane domain AVL57_17300 PF00691 OmpA family AVL57_17320 PF00563 EAL domain AVL57_17320 PF00990 Diguanylate cyclase, GGDEF domain AVL57_17320 PF03707 Bacterial signalling protein N terminal repeat AVL57_17325 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AVL57_17325 PF05221 S-adenosyl-L-homocysteine hydrolase AVL57_17380 PF00557 Metallopeptidase family M24 AVL57_17380 PF01321 Creatinase/Prolidase N-terminal domain AVL57_17385 PF00512 His Kinase A (phospho-acceptor) domain AVL57_17385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_17395 PF13419 Haloacid dehalogenase-like hydrolase AVL57_17400 PF00005 ABC transporter AVL57_17400 PF08402 TOBE domain AVL57_17405 PF00528 Binding-protein-dependent transport system inner membrane component AVL57_17410 PF00528 Binding-protein-dependent transport system inner membrane component AVL57_17425 PF00990 Diguanylate cyclase, GGDEF domain AVL57_17425 PF05230 MASE2 domain AVL57_17430 PF00990 Diguanylate cyclase, GGDEF domain AVL57_17435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AVL57_17435 PF13360 PQQ-like domain AVL57_17460 PF00005 ABC transporter AVL57_17470 PF02789 Cytosol aminopeptidase family, N-terminal domain AVL57_17470 PF00883 Cytosol aminopeptidase family, catalytic domain AVL57_17475 PF12706 Beta-lactamase superfamily domain AVL57_17480 PF03070 TENA/THI-4/PQQC family AVL57_17485 PF05402 Coenzyme PQQ synthesis protein D (PqqD) AVL57_17490 PF04055 Radical SAM superfamily AVL57_17490 PF13186 Iron-sulfur cluster-binding domain AVL57_17515 PF00072 Response regulator receiver domain AVL57_17515 PF00196 Bacterial regulatory proteins, luxR family AVL57_17520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_17520 PF00512 His Kinase A (phospho-acceptor) domain AVL57_17520 PF09456 RcsC Alpha-Beta-Loop (ABL) AVL57_17520 PF00072 Response regulator receiver domain AVL57_17530 PF12801 4Fe-4S binding domain AVL57_17530 PF04205 FMN-binding domain AVL57_17535 PF00171 Aldehyde dehydrogenase family AVL57_17540 PF00196 Bacterial regulatory proteins, luxR family AVL57_17540 PF00072 Response regulator receiver domain AVL57_17545 PF07730 Histidine kinase AVL57_17550 PF00561 alpha/beta hydrolase fold AVL57_17555 PF07729 FCD domain AVL57_17555 PF00392 Bacterial regulatory proteins, gntR family AVL57_17560 PF08787 Alginate lyase AVL57_17575 PF07715 TonB-dependent Receptor Plug Domain AVL57_17580 PF03150 Di-haem cytochrome c peroxidase AVL57_17595 PF08787 Alginate lyase AVL57_17600 PF07690 Major Facilitator Superfamily AVL57_17605 PF14592 Chondroitinase B AVL57_17615 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVL57_17615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVL57_17620 PF07883 Cupin domain AVL57_17625 PF07690 Major Facilitator Superfamily AVL57_17645 PF00498 FHA domain AVL57_17645 PF12773 Double zinc ribbon AVL57_17680 PF00805 Pentapeptide repeats (8 copies) AVL57_17680 PF00069 Protein kinase domain AVL57_17685 PF07504 Fungalysin/Thermolysin Propeptide Motif AVL57_17685 PF01447 Thermolysin metallopeptidase, catalytic domain AVL57_17685 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVL57_17685 PF03413 Peptidase propeptide and YPEB domain AVL57_17690 PF01447 Thermolysin metallopeptidase, catalytic domain AVL57_17690 PF02868 Thermolysin metallopeptidase, alpha-helical domain AVL57_17690 PF16485 Protealysin propeptide AVL57_17695 PF01061 ABC-2 type transporter AVL57_17695 PF00005 ABC transporter AVL57_17695 PF00498 FHA domain AVL57_17700 PF00270 DEAD/DEAH box helicase AVL57_17700 PF00271 Helicase conserved C-terminal domain AVL57_17705 PF01081 KDPG and KHG aldolase AVL57_17710 PF00294 pfkB family carbohydrate kinase AVL57_17715 PF00392 Bacterial regulatory proteins, gntR family AVL57_17715 PF07729 FCD domain AVL57_17725 PF00924 Mechanosensitive ion channel AVL57_17725 PF12795 Mechanosensitive ion channel porin domain AVL57_17725 PF12794 Mechanosensitive ion channel inner membrane domain 1 AVL57_17735 PF00141 Peroxidase AVL57_17745 PF00999 Sodium/hydrogen exchanger family AVL57_17745 PF02254 TrkA-N domain AVL57_17760 PF03372 Endonuclease/Exonuclease/phosphatase family AVL57_17765 PF03466 LysR substrate binding domain AVL57_17765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_17775 PF01925 Sulfite exporter TauE/SafE AVL57_17785 PF00072 Response regulator receiver domain AVL57_17785 PF08769 Sporulation initiation factor Spo0A C terminal AVL57_17795 PF00512 His Kinase A (phospho-acceptor) domain AVL57_17795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_17805 PF00136 DNA polymerase family B AVL57_17805 PF03104 DNA polymerase family B, exonuclease domain AVL57_17850 PF05958 tRNA (Uracil-5-)-methyltransferase AVL57_17855 PF00440 Bacterial regulatory proteins, tetR family AVL57_17870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVL57_17870 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_17880 PF03167 Uracil DNA glycosylase superfamily AVL57_17885 PF00990 Diguanylate cyclase, GGDEF domain AVL57_17885 PF03707 Bacterial signalling protein N terminal repeat AVL57_17885 PF00563 EAL domain AVL57_17895 PF01507 Phosphoadenosine phosphosulfate reductase family AVL57_17900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AVL57_17900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AVL57_17905 PF00667 FAD binding domain AVL57_17905 PF00175 Oxidoreductase NAD-binding domain AVL57_17905 PF00258 Flavodoxin AVL57_17910 PF07715 TonB-dependent Receptor Plug Domain AVL57_17910 PF00593 TonB dependent receptor AVL57_17935 PF04012 PspA/IM30 family AVL57_17945 PF01207 Dihydrouridine synthase (Dus) AVL57_17965 PF03707 Bacterial signalling protein N terminal repeat AVL57_17965 PF00990 Diguanylate cyclase, GGDEF domain AVL57_17965 PF00563 EAL domain AVL57_17970 PF00756 Putative esterase AVL57_17975 PF01553 Acyltransferase AVL57_17980 PF01553 Acyltransferase AVL57_17985 PF00924 Mechanosensitive ion channel AVL57_18000 PF01370 NAD dependent epimerase/dehydratase family AVL57_18005 PF00209 Sodium:neurotransmitter symporter family AVL57_18020 PF01625 Peptide methionine sulfoxide reductase AVL57_18035 PF00258 Flavodoxin AVL57_18045 PF02472 Biopolymer transport protein ExbD/TolR AVL57_18055 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AVL57_18055 PF13181 Tetratricopeptide repeat AVL57_18060 PF01270 Glycosyl hydrolases family 8 AVL57_18070 PF00535 Glycosyl transferase family 2 AVL57_18070 PF03170 Bacterial cellulose synthase subunit AVL57_18070 PF07238 PilZ domain AVL57_18085 PF05175 Methyltransferase small domain AVL57_18090 PF13460 NAD(P)H-binding AVL57_18095 PF00326 Prolyl oligopeptidase family AVL57_18095 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AVL57_18100 PF08000 Bacterial PH domain AVL57_18105 PF00563 EAL domain AVL57_18105 PF00990 Diguanylate cyclase, GGDEF domain AVL57_18105 PF08448 PAS fold AVL57_18110 PF00291 Pyridoxal-phosphate dependent enzyme AVL57_18115 PF07969 Amidohydrolase family AVL57_18120 PF00753 Metallo-beta-lactamase superfamily AVL57_18130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_18130 PF03466 LysR substrate binding domain AVL57_18135 PF13230 Glutamine amidotransferases class-II AVL57_18150 PF01037 Lrp/AsnC ligand binding domain AVL57_18165 PF00753 Metallo-beta-lactamase superfamily AVL57_18165 PF16123 Hydroxyacylglutathione hydrolase C-terminus AVL57_18175 PF11799 impB/mucB/samB family C-terminal domain AVL57_18175 PF00817 impB/mucB/samB family AVL57_18175 PF11798 IMS family HHH motif AVL57_18185 PF02424 ApbE family AVL57_18190 PF00111 2Fe-2S iron-sulfur cluster binding domain AVL57_18190 PF00175 Oxidoreductase NAD-binding domain AVL57_18190 PF00970 Oxidoreductase FAD-binding domain AVL57_18195 PF02508 Rnf-Nqr subunit, membrane protein AVL57_18200 PF02508 Rnf-Nqr subunit, membrane protein AVL57_18205 PF04205 FMN-binding domain AVL57_18210 PF03116 NQR2, RnfD, RnfE family AVL57_18220 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AVL57_18220 PF07055 Enoyl reductase FAD binding domain AVL57_18220 PF12241 Trans-2-enoyl-CoA reductase catalytic region AVL57_18225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVL57_18225 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AVL57_18230 PF00311 Phosphoenolpyruvate carboxylase AVL57_18235 PF00141 Peroxidase AVL57_18240 PF00056 lactate/malate dehydrogenase, NAD binding domain AVL57_18240 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVL57_18245 PF02863 Arginine repressor, C-terminal domain AVL57_18245 PF01316 Arginine repressor, DNA binding domain AVL57_18250 PF07715 TonB-dependent Receptor Plug Domain AVL57_18250 PF00593 TonB dependent receptor AVL57_18260 PF00593 TonB dependent receptor AVL57_18275 PF00485 Phosphoribulokinase / Uridine kinase family AVL57_18280 PF01773 Na+ dependent nucleoside transporter N-terminus AVL57_18280 PF07662 Na+ dependent nucleoside transporter C-terminus AVL57_18280 PF07670 Nucleoside recognition AVL57_18295 PF02469 Fasciclin domain AVL57_18305 PF00990 Diguanylate cyclase, GGDEF domain AVL57_18305 PF00072 Response regulator receiver domain AVL57_18315 PF00571 CBS domain AVL57_18315 PF01380 SIS domain AVL57_18320 PF00474 Sodium:solute symporter family AVL57_18330 PF00512 His Kinase A (phospho-acceptor) domain AVL57_18330 PF18415 Histidine kinase receptor ArcB trans-membrane domain AVL57_18330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_18340 PF18030 RimK PreATP-grasp domain AVL57_18340 PF08443 RimK-like ATP-grasp domain AVL57_18350 PF18030 RimK PreATP-grasp domain AVL57_18350 PF08443 RimK-like ATP-grasp domain AVL57_18360 PF00196 Bacterial regulatory proteins, luxR family AVL57_18360 PF00072 Response regulator receiver domain AVL57_18365 PF16177 Acetyl-coenzyme A synthetase N-terminus AVL57_18365 PF13193 AMP-binding enzyme C-terminal domain AVL57_18365 PF00501 AMP-binding enzyme AVL57_18375 PF00128 Alpha amylase, catalytic domain AVL57_18375 PF02806 Alpha amylase, C-terminal all-beta domain AVL57_18380 PF02690 Na+/Pi-cotransporter AVL57_18385 PF00248 Aldo/keto reductase family AVL57_18400 PF06628 Catalase-related immune-responsive AVL57_18400 PF00199 Catalase AVL57_18445 PF00005 ABC transporter AVL57_18445 PF03412 Peptidase C39 family AVL57_18445 PF00664 ABC transporter transmembrane region AVL57_18450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_18450 PF03466 LysR substrate binding domain AVL57_18460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AVL57_18460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AVL57_18465 PF16363 GDP-mannose 4,6 dehydratase AVL57_18470 PF04321 RmlD substrate binding domain AVL57_18475 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AVL57_18480 PF00483 Nucleotidyl transferase AVL57_18485 PF00534 Glycosyl transferases group 1 AVL57_18485 PF00535 Glycosyl transferase family 2 AVL57_18510 PF00535 Glycosyl transferase family 2 AVL57_18530 PF07836 DmpG-like communication domain AVL57_18530 PF00682 HMGL-like AVL57_18535 PF02348 Cytidylyltransferase AVL57_18550 PF16385 Domain of unknown function AVL57_18550 PF00884 Sulfatase AVL57_18565 PF00535 Glycosyl transferase family 2 AVL57_18570 PF00483 Nucleotidyl transferase AVL57_18570 PF01050 Mannose-6-phosphate isomerase AVL57_18575 PF01196 Ribosomal protein L17 AVL57_18580 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVL57_18580 PF01000 RNA polymerase Rpb3/RpoA insert domain AVL57_18580 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVL57_18585 PF01479 S4 domain AVL57_18585 PF00163 Ribosomal protein S4/S9 N-terminal domain AVL57_18590 PF00411 Ribosomal protein S11 AVL57_18595 PF00416 Ribosomal protein S13/S18 AVL57_18600 PF00344 SecY translocase AVL57_18605 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AVL57_18610 PF00327 Ribosomal protein L30p/L7e AVL57_18615 PF00333 Ribosomal protein S5, N-terminal domain AVL57_18615 PF03719 Ribosomal protein S5, C-terminal domain AVL57_18620 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AVL57_18625 PF00347 Ribosomal protein L6 AVL57_18630 PF00410 Ribosomal protein S8 AVL57_18635 PF00253 Ribosomal protein S14p/S29e AVL57_18640 PF00673 ribosomal L5P family C-terminus AVL57_18640 PF00281 Ribosomal protein L5 AVL57_18645 PF00467 KOW motif AVL57_18645 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AVL57_18650 PF00238 Ribosomal protein L14p/L23e AVL57_18655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_18655 PF00512 His Kinase A (phospho-acceptor) domain AVL57_18655 PF09308 LuxQ, periplasmic AVL57_18655 PF00072 Response regulator receiver domain AVL57_18670 PF00588 SpoU rRNA Methylase family AVL57_18670 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVL57_18675 PF08461 Ribonuclease R winged-helix domain AVL57_18675 PF08206 Ribonuclease B OB domain AVL57_18675 PF00773 RNB domain AVL57_18675 PF00575 S1 RNA binding domain AVL57_18675 PF17876 Cold shock domain AVL57_18680 PF09423 PhoD-like phosphatase AVL57_18680 PF16655 PhoD-like phosphatase, N-terminal domain AVL57_18690 PF08238 Sel1 repeat AVL57_18700 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVL57_18705 PF00175 Oxidoreductase NAD-binding domain AVL57_18705 PF00970 Oxidoreductase FAD-binding domain AVL57_18710 PF04389 Peptidase family M28 AVL57_18730 PF01654 Cytochrome bd terminal oxidase subunit I AVL57_18735 PF02322 Cytochrome bd terminal oxidase subunit II AVL57_18740 PF12729 Four helix bundle sensory module for signal transduction AVL57_18740 PF00672 HAMP domain AVL57_18740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_18745 PF13404 AsnC-type helix-turn-helix domain AVL57_18745 PF01037 Lrp/AsnC ligand binding domain AVL57_18750 PF00291 Pyridoxal-phosphate dependent enzyme AVL57_18760 PF00313 'Cold-shock' DNA-binding domain AVL57_18765 PF03109 ABC1 family AVL57_18775 PF01209 ubiE/COQ5 methyltransferase family AVL57_18785 PF01432 Peptidase family M3 AVL57_18790 PF00072 Response regulator receiver domain AVL57_18800 PF00512 His Kinase A (phospho-acceptor) domain AVL57_18800 PF00072 Response regulator receiver domain AVL57_18800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_18800 PF13188 PAS domain AVL57_18800 PF08448 PAS fold AVL57_18805 PF02954 Bacterial regulatory protein, Fis family AVL57_18805 PF00072 Response regulator receiver domain AVL57_18805 PF00158 Sigma-54 interaction domain AVL57_18810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVL57_18810 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_18815 PF10518 TAT (twin-arginine translocation) pathway signal sequence AVL57_18815 PF01568 Molydopterin dinucleotide binding domain AVL57_18815 PF00384 Molybdopterin oxidoreductase AVL57_18815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AVL57_18820 PF07676 WD40-like Beta Propeller Repeat AVL57_18820 PF03572 Peptidase family S41 AVL57_18820 PF14684 Tricorn protease C1 domain AVL57_18820 PF14685 Tricorn protease PDZ domain AVL57_18835 PF03412 Peptidase C39 family AVL57_18835 PF00005 ABC transporter AVL57_18835 PF00664 ABC transporter transmembrane region AVL57_18840 PF00072 Response regulator receiver domain AVL57_18840 PF00196 Bacterial regulatory proteins, luxR family AVL57_18855 PF07724 AAA domain (Cdc48 subfamily) AVL57_18855 PF00004 ATPase family associated with various cellular activities (AAA) AVL57_18860 PF00227 Proteasome subunit AVL57_18865 PF05036 Sporulation related domain AVL57_18870 PF00271 Helicase conserved C-terminal domain AVL57_18870 PF00270 DEAD/DEAH box helicase AVL57_18870 PF18074 Primosomal protein N C-terminal domain AVL57_18870 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AVL57_18870 PF17764 3′ DNA-binding domain (3′BD) AVL57_18875 PF01197 Ribosomal protein L31 AVL57_18885 PF00390 Malic enzyme, N-terminal domain AVL57_18885 PF03949 Malic enzyme, NAD binding domain AVL57_18890 PF01340 Met Apo-repressor, MetJ AVL57_18895 PF02219 Methylenetetrahydrofolate reductase AVL57_18900 PF03631 Virulence factor BrkB AVL57_18915 PF00561 alpha/beta hydrolase fold AVL57_18920 PF02580 D-Tyr-tRNA(Tyr) deacylase AVL57_18925 PF09500 Putative thioesterase (yiiD_Cterm) AVL57_18925 PF00583 Acetyltransferase (GNAT) family AVL57_18930 PF00140 Sigma-70 factor, region 1.2 AVL57_18930 PF04542 Sigma-70 region 2 AVL57_18930 PF04545 Sigma-70, region 4 AVL57_18935 PF08668 HDOD domain AVL57_18935 PF00563 EAL domain AVL57_18940 PF00563 EAL domain AVL57_18940 PF08668 HDOD domain AVL57_18945 PF18075 FtsX extracellular domain AVL57_18950 PF00005 ABC transporter AVL57_18955 PF00448 SRP54-type protein, GTPase domain AVL57_18955 PF02881 SRP54-type protein, helical bundle domain AVL57_18970 PF01914 MarC family integral membrane protein AVL57_18980 PF00883 Cytosol aminopeptidase family, catalytic domain AVL57_18980 PF12404 Peptidase AVL57_18985 PF17746 SfsA N-terminal OB domain AVL57_18985 PF03749 Sugar fermentation stimulation protein RE domain AVL57_18990 PF01258 Prokaryotic dksA/traR C4-type zinc finger AVL57_18995 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVL57_19000 PF12626 Polymerase A arginine-rich C-terminus AVL57_19000 PF12627 Probable RNA and SrmB- binding site of polymerase A AVL57_19000 PF01743 Poly A polymerase head domain AVL57_19005 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVL57_19010 PF02548 Ketopantoate hydroxymethyltransferase AVL57_19015 PF02569 Pantoate-beta-alanine ligase AVL57_19020 PF00282 Pyridoxal-dependent decarboxylase conserved domain AVL57_19025 PF00563 EAL domain AVL57_19025 PF12792 CSS motif domain associated with EAL AVL57_19035 PF01061 ABC-2 type transporter AVL57_19040 PF00005 ABC transporter AVL57_19045 PF00486 Transcriptional regulatory protein, C terminal AVL57_19045 PF00072 Response regulator receiver domain AVL57_19050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_19050 PF00672 HAMP domain AVL57_19050 PF00512 His Kinase A (phospho-acceptor) domain AVL57_19055 PF07715 TonB-dependent Receptor Plug Domain AVL57_19055 PF00593 TonB dependent receptor AVL57_19060 PF13640 2OG-Fe(II) oxygenase superfamily AVL57_19060 PF18331 PKHD-type hydroxylase C-terminal domain AVL57_19075 PF00571 CBS domain AVL57_19075 PF01595 Cyclin M transmembrane N-terminal domain AVL57_19080 PF03773 Predicted permease AVL57_19085 PF02554 Carbon starvation protein CstA AVL57_19085 PF13722 5TM C-terminal transporter carbon starvation CstA AVL57_19095 PF00474 Sodium:solute symporter family AVL57_19110 PF00258 Flavodoxin AVL57_19110 PF00667 FAD binding domain AVL57_19110 PF00175 Oxidoreductase NAD-binding domain AVL57_19140 PF03764 Elongation factor G, domain IV AVL57_19140 PF14492 Elongation Factor G, domain II AVL57_19140 PF00679 Elongation factor G C-terminus AVL57_19140 PF00009 Elongation factor Tu GTP binding domain AVL57_19140 PF03144 Elongation factor Tu domain 2 AVL57_19145 PF00177 Ribosomal protein S7p/S5e AVL57_19150 PF00164 Ribosomal protein S12/S23 AVL57_19155 PF04997 RNA polymerase Rpb1, domain 1 AVL57_19155 PF00623 RNA polymerase Rpb1, domain 2 AVL57_19155 PF04983 RNA polymerase Rpb1, domain 3 AVL57_19155 PF05000 RNA polymerase Rpb1, domain 4 AVL57_19155 PF04998 RNA polymerase Rpb1, domain 5 AVL57_19160 PF04565 RNA polymerase Rpb2, domain 3 AVL57_19160 PF00562 RNA polymerase Rpb2, domain 6 AVL57_19160 PF04560 RNA polymerase Rpb2, domain 7 AVL57_19160 PF04561 RNA polymerase Rpb2, domain 2 AVL57_19160 PF04563 RNA polymerase beta subunit AVL57_19160 PF10385 RNA polymerase beta subunit external 1 domain AVL57_19165 PF00542 Ribosomal protein L7/L12 C-terminal domain AVL57_19165 PF16320 Ribosomal protein L7/L12 dimerisation domain AVL57_19170 PF00466 Ribosomal protein L10 AVL57_19175 PF00687 Ribosomal protein L1p/L10e family AVL57_19180 PF03946 Ribosomal protein L11, N-terminal domain AVL57_19180 PF00298 Ribosomal protein L11, RNA binding domain AVL57_19185 PF02357 Transcription termination factor nusG AVL57_19185 PF00467 KOW motif AVL57_19190 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AVL57_19200 PF00005 ABC transporter AVL57_19200 PF00664 ABC transporter transmembrane region AVL57_19205 PF03737 Aldolase/RraA AVL57_19210 PF05649 Peptidase family M13 AVL57_19210 PF01431 Peptidase family M13 AVL57_19220 PF00270 DEAD/DEAH box helicase AVL57_19220 PF03880 DbpA RNA binding domain AVL57_19220 PF00271 Helicase conserved C-terminal domain AVL57_19225 PF01979 Amidohydrolase family AVL57_19235 PF08212 Lipocalin-like domain AVL57_19240 PF00248 Aldo/keto reductase family AVL57_19245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVL57_19250 PF00128 Alpha amylase, catalytic domain AVL57_19260 PF01227 GTP cyclohydrolase I AVL57_19265 PF05643 Putative bacterial lipoprotein (DUF799) AVL57_19275 PF03783 Curli production assembly/transport component CsgG AVL57_19280 PF04371 Porphyromonas-type peptidyl-arginine deiminase AVL57_19285 PF00795 Carbon-nitrogen hydrolase AVL57_19300 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) AVL57_19305 PF00271 Helicase conserved C-terminal domain AVL57_19305 PF08494 DEAD/H associated AVL57_19305 PF00270 DEAD/DEAH box helicase AVL57_19315 PF04675 DNA ligase N terminus AVL57_19315 PF01068 ATP dependent DNA ligase domain AVL57_19315 PF04679 ATP dependent DNA ligase C terminal region AVL57_19325 PF00294 pfkB family carbohydrate kinase AVL57_19330 PF00480 ROK family AVL57_19340 PF02798 Glutathione S-transferase, N-terminal domain AVL57_19340 PF00043 Glutathione S-transferase, C-terminal domain AVL57_19355 PF00561 alpha/beta hydrolase fold AVL57_19370 PF00171 Aldehyde dehydrogenase family AVL57_19375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVL57_19375 PF00205 Thiamine pyrophosphate enzyme, central domain AVL57_19375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVL57_19385 PF00762 Ferrochelatase AVL57_19390 PF03806 AbgT putative transporter family AVL57_19395 PF01145 SPFH domain / Band 7 family AVL57_19400 PF01145 SPFH domain / Band 7 family AVL57_19400 PF12221 Bacterial membrane protein N terminal AVL57_19405 PF16360 GTP-binding GTPase Middle Region AVL57_19405 PF01926 50S ribosome-binding GTPase AVL57_19405 PF13167 GTP-binding GTPase N-terminal AVL57_19410 PF17209 Hfq protein AVL57_19420 PF01119 DNA mismatch repair protein, C-terminal domain AVL57_19420 PF08676 MutL C terminal dimerisation domain AVL57_19425 PF01520 N-acetylmuramoyl-L-alanine amidase AVL57_19430 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AVL57_19435 PF03853 YjeF-related protein N-terminus AVL57_19435 PF01256 Carbohydrate kinase AVL57_19440 PF08331 Domain of unknown function (DUF1730) AVL57_19450 PF01208 Uroporphyrinogen decarboxylase (URO-D) AVL57_19455 PF09297 NADH pyrophosphatase zinc ribbon domain AVL57_19455 PF00293 NUDIX domain AVL57_19460 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AVL57_19465 PF01475 Ferric uptake regulator family AVL57_19475 PF01894 Uncharacterised protein family UPF0047 AVL57_19480 PF05736 OprF membrane domain AVL57_19480 PF00691 OmpA family AVL57_19485 PF00772 DnaB-like helicase N terminal domain AVL57_19485 PF03796 DnaB-like helicase C terminal domain AVL57_19510 PF03475 3-alpha domain AVL57_19510 PF03473 MOSC domain AVL57_19520 PF00873 AcrB/AcrD/AcrF family AVL57_19525 PF01281 Ribosomal protein L9, N-terminal domain AVL57_19525 PF03948 Ribosomal protein L9, C-terminal domain AVL57_19530 PF01084 Ribosomal protein S18 AVL57_19535 PF01250 Ribosomal protein S6 AVL57_19540 PF00672 HAMP domain AVL57_19540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_19540 PF00512 His Kinase A (phospho-acceptor) domain AVL57_19540 PF18698 Histidine kinase sensor domain AVL57_19540 PF00989 PAS fold AVL57_19555 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVL57_19555 PF00512 His Kinase A (phospho-acceptor) domain AVL57_19555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_19560 PF17200 Single Cache domain 2 AVL57_19560 PF00672 HAMP domain AVL57_19560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AVL57_19565 PF00356 Bacterial regulatory proteins, lacI family AVL57_19575 PF00232 Glycosyl hydrolase family 1 AVL57_19585 PF00005 ABC transporter AVL57_19590 PF01032 FecCD transport family AVL57_19595 PF01497 Periplasmic binding protein AVL57_19605 PF00593 TonB dependent receptor AVL57_19605 PF07715 TonB-dependent Receptor Plug Domain AVL57_19610 PF07690 Major Facilitator Superfamily AVL57_19615 PF00933 Glycosyl hydrolase family 3 N terminal domain AVL57_19615 PF01915 Glycosyl hydrolase family 3 C-terminal domain AVL57_19615 PF14310 Fibronectin type III-like domain AVL57_19630 PF03601 Conserved hypothetical protein 698 AVL57_19635 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AVL57_19640 PF00248 Aldo/keto reductase family AVL57_19660 PF00474 Sodium:solute symporter family AVL57_19665 PF01545 Cation efflux family AVL57_19685 PF00722 Glycosyl hydrolases family 16 AVL57_19700 PF00593 TonB dependent receptor AVL57_19700 PF07715 TonB-dependent Receptor Plug Domain AVL57_19705 PF00005 ABC transporter AVL57_19705 PF00664 ABC transporter transmembrane region AVL57_19710 PF00664 ABC transporter transmembrane region AVL57_19710 PF00005 ABC transporter AVL57_19720 PF02322 Cytochrome bd terminal oxidase subunit II AVL57_19725 PF01654 Cytochrome bd terminal oxidase subunit I AVL57_19735 PF00072 Response regulator receiver domain AVL57_19735 PF00158 Sigma-54 interaction domain AVL57_19735 PF02954 Bacterial regulatory protein, Fis family AVL57_19770 PF01132 Elongation factor P (EF-P) OB domain AVL57_19770 PF08207 Elongation factor P (EF-P) KOW-like domain AVL57_19770 PF09285 Elongation factor P, C-terminal AVL57_19795 PF13474 SnoaL-like domain AVL57_19835 PF05532 CsbD-like AVL57_19850 PF08281 Sigma-70, region 4 AVL57_19850 PF04542 Sigma-70 region 2 AVL57_19855 PF00082 Subtilase family AVL57_19875 PF00472 RF-1 domain AVL57_19880 PF08386 TAP-like protein AVL57_19880 PF00561 alpha/beta hydrolase fold AVL57_19905 PF01292 Prokaryotic cytochrome b561 AVL57_19910 PF04264 YceI-like domain AVL57_19915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVL57_19920 PF07715 TonB-dependent Receptor Plug Domain AVL57_19920 PF00593 TonB dependent receptor AVL57_19930 PF01048 Phosphorylase superfamily AVL57_19935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_19935 PF03466 LysR substrate binding domain AVL57_19940 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AVL57_19945 PF00107 Zinc-binding dehydrogenase AVL57_19945 PF16884 N-terminal domain of oxidoreductase AVL57_19950 PF01590 GAF domain AVL57_19950 PF00990 Diguanylate cyclase, GGDEF domain AVL57_19950 PF00360 Phytochrome region AVL57_19950 PF00563 EAL domain AVL57_19955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_19955 PF00072 Response regulator receiver domain AVL57_19955 PF00512 His Kinase A (phospho-acceptor) domain AVL57_19955 PF09308 LuxQ, periplasmic AVL57_19970 PF00296 Luciferase-like monooxygenase AVL57_19980 PF00005 ABC transporter AVL57_20000 PF07683 Cobalamin synthesis protein cobW C-terminal domain AVL57_20000 PF02492 CobW/HypB/UreG, nucleotide-binding domain AVL57_20015 PF07715 TonB-dependent Receptor Plug Domain AVL57_20015 PF00593 TonB dependent receptor AVL57_20035 PF01380 SIS domain AVL57_20040 PF00455 DeoR C terminal sensor domain AVL57_20040 PF08220 DeoR-like helix-turn-helix domain AVL57_20045 PF00132 Bacterial transferase hexapeptide (six repeats) AVL57_20045 PF14602 Hexapeptide repeat of succinyl-transferase AVL57_20045 PF12804 MobA-like NTP transferase domain AVL57_20055 PF00892 EamA-like transporter family AVL57_20060 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVL57_20060 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVL57_20065 PF01965 DJ-1/PfpI family AVL57_20065 PF12833 Helix-turn-helix domain AVL57_20070 PF00144 Beta-lactamase AVL57_20075 PF17944 Arginine decarboxylase C-terminal helical extension AVL57_20075 PF17810 Arginine decarboxylase helical bundle domain AVL57_20075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVL57_20085 PF02233 NAD(P) transhydrogenase beta subunit AVL57_20090 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AVL57_20095 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AVL57_20095 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AVL57_20115 PF03707 Bacterial signalling protein N terminal repeat AVL57_20115 PF00563 EAL domain AVL57_20115 PF00990 Diguanylate cyclase, GGDEF domain AVL57_20120 PF00118 TCP-1/cpn60 chaperonin family AVL57_20125 PF00166 Chaperonin 10 Kd subunit AVL57_20135 PF02683 Cytochrome C biogenesis protein transmembrane region AVL57_20135 PF11412 Disulphide bond corrector protein DsbC AVL57_20140 PF01551 Peptidase family M23 AVL57_20145 PF01220 Dehydroquinase class II AVL57_20150 PF00364 Biotin-requiring enzyme AVL57_20155 PF02785 Biotin carboxylase C-terminal domain AVL57_20155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVL57_20155 PF00289 Biotin carboxylase, N-terminal domain AVL57_20175 PF11490 DNA polymerase III polC-type N-terminus II AVL57_20175 PF02811 PHP domain AVL57_20175 PF00929 Exonuclease AVL57_20175 PF14579 Helix-hairpin-helix motif AVL57_20175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVL57_20175 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVL57_20190 PF01355 High potential iron-sulfur protein AVL57_20195 PF01425 Amidase AVL57_20210 PF01207 Dihydrouridine synthase (Dus) AVL57_20215 PF02954 Bacterial regulatory protein, Fis family AVL57_20220 PF01808 AICARFT/IMPCHase bienzyme AVL57_20220 PF02142 MGS-like domain AVL57_20230 PF02844 Phosphoribosylglycinamide synthetase, N domain AVL57_20230 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVL57_20230 PF02843 Phosphoribosylglycinamide synthetase, C domain AVL57_20240 PF00520 Ion transport protein AVL57_20240 PF00027 Cyclic nucleotide-binding domain AVL57_20250 PF00485 Phosphoribulokinase / Uridine kinase family AVL57_20255 PF00860 Permease family AVL57_20260 PF07715 TonB-dependent Receptor Plug Domain AVL57_20260 PF07660 Secretin and TonB N terminus short domain AVL57_20260 PF00593 TonB dependent receptor AVL57_20270 PF00072 Response regulator receiver domain AVL57_20270 PF00486 Transcriptional regulatory protein, C terminal AVL57_20275 PF00672 HAMP domain AVL57_20275 PF00512 His Kinase A (phospho-acceptor) domain AVL57_20275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVL57_20290 PF01430 Hsp33 protein AVL57_20295 PF01479 S4 domain AVL57_20300 PF11356 Type II secretion system protein C AVL57_20305 PF00263 Bacterial type II and III secretion system protein AVL57_20305 PF03958 Bacterial type II/III secretion system short domain AVL57_20310 PF00437 Type II/IV secretion system protein AVL57_20315 PF00482 Type II secretion system (T2SS), protein F AVL57_20320 PF08334 Type II secretion system (T2SS), protein G AVL57_20320 PF07963 Prokaryotic N-terminal methylation motif AVL57_20325 PF07963 Prokaryotic N-terminal methylation motif AVL57_20325 PF12019 Type II transport protein GspH AVL57_20330 PF02501 Type II secretion system (T2SS), protein I AVL57_20330 PF07963 Prokaryotic N-terminal methylation motif AVL57_20335 PF11612 Type II secretion system (T2SS), protein J AVL57_20335 PF07963 Prokaryotic N-terminal methylation motif AVL57_20340 PF03934 Type II secretion system (T2SS), protein K AVL57_20345 PF12693 GspL periplasmic domain AVL57_20345 PF05134 Type II secretion system (T2SS), protein L AVL57_20350 PF04612 Type II secretion system (T2SS), protein M AVL57_20360 PF12706 Beta-lactamase superfamily domain AVL57_20365 PF00171 Aldehyde dehydrogenase family AVL57_20370 PF01931 Protein of unknown function DUF84 AVL57_20375 PF13419 Haloacid dehalogenase-like hydrolase AVL57_20380 PF00293 NUDIX domain AVL57_20385 PF00459 Inositol monophosphatase family AVL57_20400 PF04349 Periplasmic glucan biosynthesis protein, MdoG AVL57_20410 PF06794 Uncharacterised protein family (UPF0270) AVL57_20415 PF00561 alpha/beta hydrolase fold AVL57_20425 PF12848 ABC transporter AVL57_20425 PF00005 ABC transporter AVL57_20440 PF04102 SlyX AVL57_20450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVL57_20450 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AVL57_20460 PF01272 Transcription elongation factor, GreA/GreB, C-term AVL57_20460 PF03449 Transcription elongation factor, N-terminal AVL57_20465 PF00575 S1 RNA binding domain AVL57_20465 PF17674 HHH domain AVL57_20465 PF16921 Tex protein YqgF-like domain AVL57_20465 PF09371 Tex-like protein N-terminal domain AVL57_20480 PF00561 alpha/beta hydrolase fold AVL57_20485 PF00156 Phosphoribosyl transferase domain AVL57_20495 PF01521 Iron-sulphur cluster biosynthesis AVL57_20495 PF01106 NifU-like domain AVL57_20505 PF01177 Asp/Glu/Hydantoin racemase AVL57_20520 PF06445 GyrI-like small molecule binding domain AVL57_20525 PF01554 MatE AVL57_20540 PF02630 SCO1/SenC AVL57_20545 PF01040 UbiA prenyltransferase family AVL57_20550 PF02628 Cytochrome oxidase assembly protein AVL57_20570 PF00510 Cytochrome c oxidase subunit III AVL57_20575 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AVL57_20580 PF00115 Cytochrome C and Quinol oxidase polypeptide I AVL57_20585 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AVL57_20585 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AVL57_20590 PF01726 LexA DNA binding domain AVL57_20590 PF00717 Peptidase S24-like AVL57_20595 PF00593 TonB dependent receptor AVL57_20595 PF07715 TonB-dependent Receptor Plug Domain AVL57_20605 PF01553 Acyltransferase AVL57_20610 PF00291 Pyridoxal-phosphate dependent enzyme AVL57_20610 PF00585 C-terminal regulatory domain of Threonine dehydratase AVL57_20615 PF00920 Dehydratase family AVL57_20620 PF01063 Amino-transferase class IV AVL57_20625 PF03458 UPF0126 domain AVL57_20630 PF01078 Magnesium chelatase, subunit ChlI AVL57_20630 PF13335 Magnesium chelatase, subunit ChlI C-terminal AVL57_20635 PF03466 LysR substrate binding domain AVL57_20635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVL57_20640 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AVL57_20640 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AVL57_20645 PF07690 Major Facilitator Superfamily AVL57_20655 PF07244 Surface antigen variable number repeat AVL57_20655 PF01103 Surface antigen AVL57_20655 PF17243 POTRA domain TamA domain 1 AVL57_20660 PF04357 TamB, inner membrane protein subunit of TAM complex AVL57_20685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVL57_20685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVL57_20695 PF01472 PUA domain AVL57_20695 PF00696 Amino acid kinase family AVL57_20715 PF03109 ABC1 family AVL57_20725 PF04116 Fatty acid hydroxylase superfamily AVL57_20740 PF01979 Amidohydrolase family AVL57_20760 PF06724 Domain of Unknown Function (DUF1206) AVL57_20765 PF01206 Sulfurtransferase TusA AVL57_20770 PF00156 Phosphoribosyl transferase domain AVL57_20775 PF01138 3' exoribonuclease family, domain 1 AVL57_20775 PF03725 3' exoribonuclease family, domain 2 AVL57_20780 PF03755 YicC-like family, N-terminal region AVL57_20780 PF08340 Domain of unknown function (DUF1732) AVL57_20795 PF04820 Tryptophan halogenase AVL57_20810 PF00232 Glycosyl hydrolase family 1 AVL57_20820 PF00356 Bacterial regulatory proteins, lacI family AVL57_20830 PF05736 OprF membrane domain AVL57_20830 PF00691 OmpA family AVL57_20835 PF01966 HD domain AVL57_20850 PF00043 Glutathione S-transferase, C-terminal domain AVL57_20850 PF02798 Glutathione S-transferase, N-terminal domain AVL57_20865 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVL57_20865 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AVL57_20870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVL57_20870 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVL57_20875 PF00231 ATP synthase AVL57_20880 PF00306 ATP synthase alpha/beta chain, C terminal domain AVL57_20880 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVL57_20880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVL57_20885 PF00213 ATP synthase delta (OSCP) subunit AVL57_20890 PF00430 ATP synthase B/B' CF(0) AVL57_20895 PF00137 ATP synthase subunit C AVL57_20900 PF00119 ATP synthase A chain AVL57_20910 PF02195 ParB-like nuclease domain AVL57_20910 PF17762 HTH domain found in ParB protein AVL57_20915 PF13614 AAA domain AVL57_20920 PF02527 rRNA small subunit methyltransferase G AVL57_20925 PF13932 GidA associated domain AVL57_20925 PF01134 Glucose inhibited division protein A AVL57_20940 PF00258 Flavodoxin AVL57_20945 PF01926 50S ribosome-binding GTPase AVL57_20945 PF12631 MnmE helical domain AVL57_20945 PF10396 GTP-binding protein TrmE N-terminus AVL57_20950 PF04461 Protein of unknown function (DUF520) AVL57_20955 PF02096 60Kd inner membrane protein AVL57_20955 PF14849 YidC periplasmic domain AVL57_20960 PF00825 Ribonuclease P AVL57_20965 PF00468 Ribosomal protein L34