AVL57_00075	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_00115	SM00014	Acid phosphatase homologues
AVL57_00135	SM00387	Histidine kinase-like ATPases
AVL57_00135	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_00140	SM00448	cheY-homologous receiver domain
AVL57_00140	SM00862	Transcriptional regulatory protein, C terminal
AVL57_00250	SM00953	AVL57_00250
AVL57_00375	SM00382	ATPases associated with a variety of cellular activities
AVL57_00395	SM00382	ATPases associated with a variety of cellular activities
AVL57_00405	SM00530	Helix-turn-helix XRE-family like proteins 
AVL57_00525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_00525	SM00387	Histidine kinase-like ATPases
AVL57_00525	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_00530	SM00448	cheY-homologous receiver domain
AVL57_00530	SM00862	Transcriptional regulatory protein, C terminal
AVL57_00580	SM00422	helix_turn_helix, mercury resistance
AVL57_00595	SM00746	metallochaperone-like domain
AVL57_00720	SM00091	PAS domain
AVL57_00725	SM00411	bacterial (prokaryotic) histone like domain
AVL57_00770	SM00530	Helix-turn-helix XRE-family like proteins 
AVL57_00780	SM00477	DNA/RNA non-specific endonuclease
AVL57_00780	SM00892	DNA/RNA non-specific endonuclease
AVL57_00895	SM00237	Domains in Na-Ca exchangers and integrin-beta4
AVL57_00900	SM00237	Domains in Na-Ca exchangers and integrin-beta4
AVL57_00975	SM00267	diguanylate cyclase
AVL57_01220	SM00382	ATPases associated with a variety of cellular activities
AVL57_01220	SM00760	Bacterial dnaA protein helix-turn-helix domain
AVL57_01225	SM00480	DNA polymerase III beta subunit
AVL57_01235	SM00387	Histidine kinase-like ATPases
AVL57_01235	SM00433	TopoisomeraseII
AVL57_01250	SM00836	DALR anticodon binding domain
AVL57_01285	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AVL57_01285	SM00474	3'-5' exonuclease
AVL57_01285	SM00475	5'-3' exonuclease
AVL57_01285	SM00482	DNA polymerase A domain
AVL57_01320	SM00257	Lysin motif
AVL57_01410	SM00481	DNA polymerase alpha chain like domain
AVL57_01510	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AVL57_01510	SM01232	AVL57_01510
AVL57_01540	SM00052	Putative diguanylate phosphodiesterase
AVL57_01540	SM00267	diguanylate cyclase
AVL57_01550	SM00829	Enoylreductase
AVL57_01555	SM00450	Rhodanese Homology Domain
AVL57_01590	SM00052	Putative diguanylate phosphodiesterase
AVL57_01590	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AVL57_01590	SM00267	diguanylate cyclase
AVL57_01635	SM00387	Histidine kinase-like ATPases
AVL57_01645	SM00487	DEAD-like helicases superfamily
AVL57_01675	SM00989	AVL57_01675
AVL57_01685	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_01760	SM00346	helix_turn_helix isocitrate lyase regulation
AVL57_01770	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AVL57_01790	SM00028	Tetratricopeptide repeats
AVL57_01795	SM00387	Histidine kinase-like ATPases
AVL57_01795	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_01795	SM00448	cheY-homologous receiver domain
AVL57_01825	SM00382	ATPases associated with a variety of cellular activities
AVL57_01850	SM00849	Metallo-beta-lactamase superfamily
AVL57_01880	SM00876	Biotin and Thiamin Synthesis associated domain
AVL57_01945	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVL57_02005	SM00267	diguanylate cyclase
AVL57_02015	SM00072	Guanylate kinase homologues.
AVL57_02020	SM01409	AVL57_02020
AVL57_02025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVL57_02025	SM00954	Region found in RelA / SpoT proteins
AVL57_02040	SM00487	DEAD-like helicases superfamily
AVL57_02040	SM00490	helicase superfamily c-terminal domain
AVL57_02075	SM00382	ATPases associated with a variety of cellular activities
AVL57_02110	SM00028	Tetratricopeptide repeats
AVL57_02110	SM00267	diguanylate cyclase
AVL57_02140	SM00271	DnaJ molecular chaperone homology domain
AVL57_02175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_02195	SM00052	Putative diguanylate phosphodiesterase
AVL57_02195	SM00267	diguanylate cyclase
AVL57_02215	SM00341	Helicase and RNase D C-terminal
AVL57_02215	SM00487	DEAD-like helicases superfamily
AVL57_02215	SM00490	helicase superfamily c-terminal domain
AVL57_02215	SM00956	AVL57_02215
AVL57_02225	SM00924	MgtE intracellular N domain
AVL57_02235	SM00267	diguanylate cyclase
AVL57_02235	SM00448	cheY-homologous receiver domain
AVL57_02245	SM00971	Serine acetyltransferase, N-terminal
AVL57_02285	SM00014	Acid phosphatase homologues
AVL57_02325	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AVL57_02360	SM00354	helix_turn _helix lactose operon repressor
AVL57_02425	SM00862	Transcriptional regulatory protein, C terminal
AVL57_02435	SM00823	Phosphopantetheine attachment site
AVL57_02445	SM00823	Phosphopantetheine attachment site
AVL57_02455	SM00382	ATPases associated with a variety of cellular activities
AVL57_02470	SM00448	cheY-homologous receiver domain
AVL57_02475	SM00073	Histidine Phosphotransfer domain
AVL57_02475	SM00387	Histidine kinase-like ATPases
AVL57_02475	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_02475	SM00448	cheY-homologous receiver domain
AVL57_02485	SM01130	AVL57_02485
AVL57_02535	SM00420	helix_turn_helix, Deoxyribose operon repressor
AVL57_02535	SM01134	AVL57_02535
AVL57_02570	SM00965	Secretin and TonB N terminus short domain
AVL57_02650	SM00316	Ribosomal protein S1-like RNA-binding domain
AVL57_02670	SM00634	Bacterial Ig-like domain (group 1)
AVL57_02685	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_02690	SM01038	Beta galactosidase small chain
AVL57_02695	SM00448	cheY-homologous receiver domain
AVL57_02695	SM00862	Transcriptional regulatory protein, C terminal
AVL57_02700	SM00387	Histidine kinase-like ATPases
AVL57_02725	SM00478	endonuclease III
AVL57_02725	SM00525	AVL57_02725
AVL57_02765	SM00448	cheY-homologous receiver domain
AVL57_02765	SM00862	Transcriptional regulatory protein, C terminal
AVL57_02775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_02780	SM00448	cheY-homologous receiver domain
AVL57_02785	SM00073	Histidine Phosphotransfer domain
AVL57_02785	SM00260	Two component signalling adaptor domain
AVL57_02785	SM00387	Histidine kinase-like ATPases
AVL57_02785	SM01231	AVL57_02785
AVL57_02790	SM00260	Two component signalling adaptor domain
AVL57_02795	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_02795	SM00091	PAS domain
AVL57_02795	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_02800	SM00138	Methyltransferase, chemotaxis proteins 
AVL57_02810	SM00448	cheY-homologous receiver domain
AVL57_02840	SM00354	helix_turn _helix lactose operon repressor
AVL57_02865	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_02865	SM00387	Histidine kinase-like ATPases
AVL57_02865	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_02865	SM00448	cheY-homologous receiver domain
AVL57_02890	SM00354	helix_turn _helix lactose operon repressor
AVL57_02960	SM00855	Phosphoglycerate mutase family
AVL57_02970	SM00671	Sel1-like repeats.
AVL57_02975	SM00382	ATPases associated with a variety of cellular activities
AVL57_02980	SM01403	AVL57_02980
AVL57_03000	SM01382	AVL57_03000
AVL57_03000	SM01383	AVL57_03000
AVL57_03015	SM00322	K homology RNA-binding domain
AVL57_03065	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_03065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_03090	SM00487	DEAD-like helicases superfamily
AVL57_03090	SM00490	helicase superfamily c-terminal domain
AVL57_03120	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_03135	SM00938	Nitrogen regulatory protein P-II
AVL57_03155	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AVL57_03190	SM00073	Histidine Phosphotransfer domain
AVL57_03190	SM00387	Histidine kinase-like ATPases
AVL57_03190	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_03190	SM00448	cheY-homologous receiver domain
AVL57_03195	SM00434	DNA Topoisomerase IV
AVL57_03205	SM00052	Putative diguanylate phosphodiesterase
AVL57_03205	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_03205	SM00267	diguanylate cyclase
AVL57_03210	SM01150	AVL57_03210
AVL57_03285	SM00965	Secretin and TonB N terminus short domain
AVL57_03305	SM00842	Cell division protein FtsA
AVL57_03315	SM00919	Malic enzyme, NAD binding domain
AVL57_03315	SM01274	AVL57_03315
AVL57_03345	SM00028	Tetratricopeptide repeats
AVL57_03355	SM00052	Putative diguanylate phosphodiesterase
AVL57_03385	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AVL57_03390	SM00851	MGS-like domain
AVL57_03415	SM00448	cheY-homologous receiver domain
AVL57_03415	SM00862	Transcriptional regulatory protein, C terminal
AVL57_03420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_03420	SM00387	Histidine kinase-like ATPases
AVL57_03420	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_03450	SM00450	Rhodanese Homology Domain
AVL57_03495	SM00479	AVL57_03495
AVL57_03515	SM00028	Tetratricopeptide repeats
AVL57_03570	SM00267	diguanylate cyclase
AVL57_03575	SM01004	Delta-aminolevulinic acid dehydratase
AVL57_03585	SM00487	DEAD-like helicases superfamily
AVL57_03585	SM00490	helicase superfamily c-terminal domain
AVL57_03595	SM00357	Cold shock protein domain
AVL57_03595	SM00382	ATPases associated with a variety of cellular activities
AVL57_03595	SM00959	Rho termination factor, N-terminal domain
AVL57_03605	SM00387	Histidine kinase-like ATPases
AVL57_03605	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_03605	SM00448	cheY-homologous receiver domain
AVL57_03615	SM01001	AIR carboxylase
AVL57_03665	SM00788	Adenylosuccinate synthetase
AVL57_03720	SM01005	Alanine racemase, C-terminal domain
AVL57_03745	SM00062	Bacterial periplasmic substrate-binding proteins
AVL57_03770	SM00360	RNA recognition motif
AVL57_04000	SM00257	Lysin motif
AVL57_04045	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_04045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_04045	SM01049	AVL57_04045
AVL57_04070	SM00448	cheY-homologous receiver domain
AVL57_04070	SM00862	Transcriptional regulatory protein, C terminal
AVL57_04075	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_04080	SM00287	Bacterial SH3 domain homologues
AVL57_04085	SM01118	AVL57_04085
AVL57_04090	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_04095	SM00927	DNA mismatch repair enzyme MutH
AVL57_04105	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AVL57_04125	SM00448	cheY-homologous receiver domain
AVL57_04130	SM00267	diguanylate cyclase
AVL57_04135	SM00387	Histidine kinase-like ATPases
AVL57_04135	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_04135	SM00448	cheY-homologous receiver domain
AVL57_04160	SM00487	DEAD-like helicases superfamily
AVL57_04160	SM00490	helicase superfamily c-terminal domain
AVL57_04165	SM00670	Large family of predicted nucleotide-binding domains
AVL57_04175	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVL57_04175	SM00895	AVL57_04175
AVL57_04195	SM00829	Enoylreductase
AVL57_04200	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AVL57_04220	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_04260	SM00346	helix_turn_helix isocitrate lyase regulation
AVL57_04265	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVL57_04265	SM00895	AVL57_04265
AVL57_04285	SM00028	Tetratricopeptide repeats
AVL57_04355	SM00635	Bacterial Ig-like domain 2
AVL57_04380	SM00487	DEAD-like helicases superfamily
AVL57_04380	SM00490	helicase superfamily c-terminal domain
AVL57_04385	SM00028	Tetratricopeptide repeats
AVL57_04420	SM00387	Histidine kinase-like ATPases
AVL57_04420	SM00433	TopoisomeraseII
AVL57_04425	SM00052	Putative diguanylate phosphodiesterase
AVL57_04425	SM00091	PAS domain
AVL57_04425	SM00138	Methyltransferase, chemotaxis proteins 
AVL57_04425	SM00267	diguanylate cyclase
AVL57_04430	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AVL57_04460	SM00841	Elongation factor P, C-terminal
AVL57_04460	SM01185	AVL57_04460
AVL57_04505	SM00014	Acid phosphatase homologues
AVL57_04515	SM01012	AVL57_04515
AVL57_04540	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AVL57_04555	SM00091	PAS domain
AVL57_04555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_04570	SM00382	ATPases associated with a variety of cellular activities
AVL57_04640	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AVL57_04645	SM01007	Class II Aldolase and Adducin N-terminal domain
AVL57_04675	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_04675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_04685	SM00400	zinc finger
AVL57_04685	SM00493	AVL57_04685
AVL57_04685	SM00766	DNA primase DnaG DnaB-binding
AVL57_04710	SM01207	AVL57_04710
AVL57_04715	SM00905	Dihydroneopterin aldolase
AVL57_04750	SM00530	Helix-turn-helix XRE-family like proteins 
AVL57_04760	SM00387	Histidine kinase-like ATPases
AVL57_04765	SM00448	cheY-homologous receiver domain
AVL57_04765	SM00862	Transcriptional regulatory protein, C terminal
AVL57_04770	SM00387	Histidine kinase-like ATPases
AVL57_04770	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_04780	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AVL57_04785	SM00710	Parallel beta-helix repeats
AVL57_04820	SM00028	Tetratricopeptide repeats
AVL57_04830	SM00448	cheY-homologous receiver domain
AVL57_04830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVL57_04835	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_04835	SM00091	PAS domain
AVL57_04835	SM00387	Histidine kinase-like ATPases
AVL57_04835	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_04835	SM00448	cheY-homologous receiver domain
AVL57_04880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_04880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_04895	SM00650	Ribosomal RNA adenine dimethylases
AVL57_04915	SM00271	DnaJ molecular chaperone homology domain
AVL57_04960	SM00954	Region found in RelA / SpoT proteins
AVL57_05000	SM00965	Secretin and TonB N terminus short domain
AVL57_05005	SM00631	AVL57_05005
AVL57_05045	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_05055	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVL57_05055	SM00924	MgtE intracellular N domain
AVL57_05085	SM00382	ATPases associated with a variety of cellular activities
AVL57_05115	SM00382	ATPases associated with a variety of cellular activities
AVL57_05150	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVL57_05155	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVL57_05180	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_05210	SM00052	Putative diguanylate phosphodiesterase
AVL57_05210	SM00267	diguanylate cyclase
AVL57_05215	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_05215	SM00387	Histidine kinase-like ATPases
AVL57_05215	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_05215	SM00448	cheY-homologous receiver domain
AVL57_05225	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_05245	SM01118	AVL57_05245
AVL57_05255	SM00861	Transketolase, pyrimidine binding domain
AVL57_05260	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AVL57_05305	SM00382	ATPases associated with a variety of cellular activities
AVL57_05355	SM00267	diguanylate cyclase
AVL57_05375	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_05395	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_05410	SM00758	AVL57_05410
AVL57_05410	SM01217	AVL57_05410
AVL57_05415	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVL57_05425	SM01263	AVL57_05425
AVL57_05440	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_05440	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_05455	SM00267	diguanylate cyclase
AVL57_05480	SM00382	ATPases associated with a variety of cellular activities
AVL57_05620	SM00448	cheY-homologous receiver domain
AVL57_05625	SM00091	PAS domain
AVL57_05645	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVL57_05655	SM00487	DEAD-like helicases superfamily
AVL57_05655	SM00490	helicase superfamily c-terminal domain
AVL57_05665	SM00382	ATPases associated with a variety of cellular activities
AVL57_05690	SM01329	AVL57_05690
AVL57_05695	SM00917	LeuA allosteric (dimerisation) domain
AVL57_05715	SM01192	AVL57_05715
AVL57_05715	SM01193	AVL57_05715
AVL57_05725	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AVL57_05725	SM00534	ATPase domain of DNA mismatch repair MUTS family
AVL57_05735	SM00382	ATPases associated with a variety of cellular activities
AVL57_05740	SM00382	ATPases associated with a variety of cellular activities
AVL57_05765	SM00382	ATPases associated with a variety of cellular activities
AVL57_05835	SM00382	ATPases associated with a variety of cellular activities
AVL57_05875	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AVL57_05880	SM01329	AVL57_05880
AVL57_05900	SM00267	diguanylate cyclase
AVL57_05990	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVL57_06035	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVL57_06045	SM00935	Outer membrane protein (OmpH-like)
AVL57_06070	SM00481	DNA polymerase alpha chain like domain
AVL57_06080	SM00977	TilS substrate C-terminal domain
AVL57_06085	SM00267	diguanylate cyclase
AVL57_06105	SM00062	Bacterial periplasmic substrate-binding proteins
AVL57_06110	SM01211	AVL57_06110
AVL57_06115	SM00463	Small MutS-related domain
AVL57_06120	SM00062	Bacterial periplasmic substrate-binding proteins
AVL57_06120	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AVL57_06135	SM00487	DEAD-like helicases superfamily
AVL57_06135	SM00490	helicase superfamily c-terminal domain
AVL57_06140	SM00882	Coenzyme A transferase
AVL57_06145	SM00882	Coenzyme A transferase
AVL57_06160	SM00387	Histidine kinase-like ATPases
AVL57_06205	SM00861	Transketolase, pyrimidine binding domain
AVL57_06220	SM00220	Serine/Threonine protein kinases, catalytic domain
AVL57_06245	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AVL57_06255	SM00945	ProQ/FINO family
AVL57_06260	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVL57_06260	SM00245	tail specific protease
AVL57_06315	SM00981	AVL57_06315
AVL57_06325	SM00382	ATPases associated with a variety of cellular activities
AVL57_06465	SM00100	Cyclic nucleotide-monophosphate binding domain
AVL57_06465	SM00419	helix_turn_helix, cAMP Regulatory protein
AVL57_06490	SM00047	Lysozyme subfamily 2
AVL57_06510	SM00450	Rhodanese Homology Domain
AVL57_06520	SM01144	AVL57_06520
AVL57_06615	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AVL57_06615	SM00465	GIY-YIG type nucleases (URI domain)
AVL57_06620	SM00421	helix_turn_helix, Lux Regulon
AVL57_06620	SM00448	cheY-homologous receiver domain
AVL57_06665	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_06670	SM00448	cheY-homologous receiver domain
AVL57_06670	SM00862	Transcriptional regulatory protein, C terminal
AVL57_06735	SM00382	ATPases associated with a variety of cellular activities
AVL57_06745	SM00843	AVL57_06745
AVL57_06750	SM00344	helix_turn_helix ASNC type
AVL57_06755	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AVL57_06755	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AVL57_06760	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AVL57_06765	SM00028	Tetratricopeptide repeats
AVL57_06780	SM00411	bacterial (prokaryotic) histone like domain
AVL57_06785	SM00316	Ribosomal protein S1-like RNA-binding domain
AVL57_06805	SM00434	DNA Topoisomerase IV
AVL57_06830	SM00387	Histidine kinase-like ATPases
AVL57_06830	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_06835	SM00448	cheY-homologous receiver domain
AVL57_06835	SM00862	Transcriptional regulatory protein, C terminal
AVL57_06860	SM00422	helix_turn_helix, mercury resistance
AVL57_06935	SM00382	ATPases associated with a variety of cellular activities
AVL57_06975	SM01130	AVL57_06975
AVL57_07060	SM00421	helix_turn_helix, Lux Regulon
AVL57_07060	SM00448	cheY-homologous receiver domain
AVL57_07090	SM00642	Alpha-amylase domain
AVL57_07095	SM00852	Probable molybdopterin binding domain
AVL57_07115	SM00382	ATPases associated with a variety of cellular activities
AVL57_07160	SM00563	Phosphate acyltransferases
AVL57_07195	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_07225	SM00893	Electron transfer flavoprotein domain
AVL57_07230	SM00893	Electron transfer flavoprotein domain
AVL57_07240	SM00528	Domain in histone-like proteins of HNS family
AVL57_07260	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_07260	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_07280	SM00354	helix_turn _helix lactose operon repressor
AVL57_07290	SM00797	Allophanate hydrolase subunit 2
AVL57_07295	SM00796	Allophanate hydrolase subunit 1
AVL57_07345	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVL57_07350	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVL57_07430	SM00382	ATPases associated with a variety of cellular activities
AVL57_07440	SM00316	Ribosomal protein S1-like RNA-binding domain
AVL57_07440	SM00322	K homology RNA-binding domain
AVL57_07445	SM00507	HNH nucleases
AVL57_07485	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AVL57_07485	SM00195	Dual specificity phosphatase, catalytic domain
AVL57_07495	SM00052	Putative diguanylate phosphodiesterase
AVL57_07495	SM00267	diguanylate cyclase
AVL57_07495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_07525	SM00382	ATPases associated with a variety of cellular activities
AVL57_07535	SM01103	AVL57_07535
AVL57_07595	SM00936	Penicillin-binding protein 5, C-terminal domain 
AVL57_07610	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVL57_07620	SM00870	AVL57_07620
AVL57_07650	SM00731	SprT homologues.
AVL57_07680	SM00316	Ribosomal protein S1-like RNA-binding domain
AVL57_07685	SM00382	ATPases associated with a variety of cellular activities
AVL57_07685	SM01086	C-terminal, D2-small domain, of ClpB protein
AVL57_07695	SM00357	Cold shock protein domain
AVL57_07725	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
AVL57_07730	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
AVL57_07835	SM00710	Parallel beta-helix repeats
AVL57_07865	SM00354	helix_turn _helix lactose operon repressor
AVL57_07885	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AVL57_07950	SM00267	diguanylate cyclase
AVL57_07990	SM00825	Beta-ketoacyl synthase
AVL57_08000	SM00822	AVL57_08000
AVL57_08005	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AVL57_08040	SM00363	S4 RNA-binding domain
AVL57_08045	SM00316	Ribosomal protein S1-like RNA-binding domain
AVL57_08050	SM00587	ZnF_C4 abd HLH domain containing kinases domain
AVL57_08120	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AVL57_08120	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AVL57_08120	SM00493	AVL57_08120
AVL57_08130	SM00634	Bacterial Ig-like domain (group 1)
AVL57_08145	SM00382	ATPases associated with a variety of cellular activities
AVL57_08150	SM00052	Putative diguanylate phosphodiesterase
AVL57_08180	SM00479	AVL57_08180
AVL57_08190	SM00829	Enoylreductase
AVL57_08195	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AVL57_08210	SM00382	ATPases associated with a variety of cellular activities
AVL57_08210	SM00487	DEAD-like helicases superfamily
AVL57_08210	SM00490	helicase superfamily c-terminal domain
AVL57_08210	SM00847	Helicase associated domain (HA2)  Add an annotation
AVL57_08220	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_08245	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVL57_08250	SM00387	Histidine kinase-like ATPases
AVL57_08250	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_08250	SM00448	cheY-homologous receiver domain
AVL57_08255	SM00479	AVL57_08255
AVL57_08265	SM00062	Bacterial periplasmic substrate-binding proteins
AVL57_08265	SM00267	diguanylate cyclase
AVL57_08275	SM00422	helix_turn_helix, mercury resistance
AVL57_08295	SM00878	Biotin carboxylase C-terminal domain
AVL57_08305	SM01321	AVL57_08305
AVL57_08310	SM00052	Putative diguanylate phosphodiesterase
AVL57_08310	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AVL57_08310	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_08310	SM00091	PAS domain
AVL57_08310	SM00267	diguanylate cyclase
AVL57_08400	SM00487	DEAD-like helicases superfamily
AVL57_08400	SM00490	helicase superfamily c-terminal domain
AVL57_08400	SM00982	AVL57_08400
AVL57_08400	SM01058	CarD-like/TRCF domain
AVL57_08440	SM00411	bacterial (prokaryotic) histone like domain
AVL57_08445	SM00873	B3/4 domain
AVL57_08445	SM00874	tRNA synthetase B5 domain
AVL57_08445	SM00896	Ferredoxin-fold anticodon binding domain
AVL57_08520	SM00052	Putative diguanylate phosphodiesterase
AVL57_08520	SM00267	diguanylate cyclase
AVL57_08590	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AVL57_08680	SM00387	Histidine kinase-like ATPases
AVL57_08680	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_08680	SM00448	cheY-homologous receiver domain
AVL57_08685	SM00267	diguanylate cyclase
AVL57_08685	SM00448	cheY-homologous receiver domain
AVL57_08690	SM00052	Putative diguanylate phosphodiesterase
AVL57_08690	SM00091	PAS domain
AVL57_08690	SM00267	diguanylate cyclase
AVL57_08690	SM00448	cheY-homologous receiver domain
AVL57_08725	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AVL57_08730	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AVL57_08760	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_08760	SM00091	PAS domain
AVL57_08760	SM00267	diguanylate cyclase
AVL57_08780	SM00028	Tetratricopeptide repeats
AVL57_08780	SM00267	diguanylate cyclase
AVL57_08860	SM00052	Putative diguanylate phosphodiesterase
AVL57_08860	SM00267	diguanylate cyclase
AVL57_08890	SM00460	Transglutaminase/protease-like homologues
AVL57_08900	SM00331	Sigma factor PP2C-like phosphatases
AVL57_08900	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AVL57_08905	SM01116	AVL57_08905
AVL57_08910	SM00838	Elongation factor G C-terminus
AVL57_08910	SM00889	Elongation factor G, domain IV
AVL57_08960	SM00937	AVL57_08960
AVL57_08985	SM01400	AVL57_08985
AVL57_08990	SM00052	Putative diguanylate phosphodiesterase
AVL57_08990	SM00267	diguanylate cyclase
AVL57_09000	SM00829	Enoylreductase
AVL57_09050	SM00903	Flavin reductase like domain
AVL57_09070	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVL57_09085	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVL57_09085	SM01091	Transporter associated domain
AVL57_09125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_09135	SM00851	MGS-like domain
AVL57_09135	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AVL57_09140	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AVL57_09160	SM00052	Putative diguanylate phosphodiesterase
AVL57_09160	SM00091	PAS domain
AVL57_09170	SM00271	DnaJ molecular chaperone homology domain
AVL57_09185	SM00387	Histidine kinase-like ATPases
AVL57_09185	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_09185	SM00448	cheY-homologous receiver domain
AVL57_09190	SM00421	helix_turn_helix, Lux Regulon
AVL57_09190	SM00448	cheY-homologous receiver domain
AVL57_09255	SM01266	AVL57_09255
AVL57_09270	SM00363	S4 RNA-binding domain
AVL57_09290	SM00481	DNA polymerase alpha chain like domain
AVL57_09340	SM00448	cheY-homologous receiver domain
AVL57_09340	SM00862	Transcriptional regulatory protein, C terminal
AVL57_09345	SM00387	Histidine kinase-like ATPases
AVL57_09355	SM00905	Dihydroneopterin aldolase
AVL57_09370	SM00382	ATPases associated with a variety of cellular activities
AVL57_09385	SM01321	AVL57_09385
AVL57_09445	SM00028	Tetratricopeptide repeats
AVL57_09445	SM00448	cheY-homologous receiver domain
AVL57_09455	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVL57_09460	SM00382	ATPases associated with a variety of cellular activities
AVL57_09480	SM00382	ATPases associated with a variety of cellular activities
AVL57_09490	SM00226	Low molecular weight phosphatase family
AVL57_09515	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVL57_09515	SM00876	Biotin and Thiamin Synthesis associated domain
AVL57_09580	SM00267	diguanylate cyclase
AVL57_09620	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVL57_09625	SM00829	Enoylreductase
AVL57_09630	SM00829	Enoylreductase
AVL57_09650	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AVL57_09680	SM00028	Tetratricopeptide repeats
AVL57_09680	SM00387	Histidine kinase-like ATPases
AVL57_09680	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_09680	SM00448	cheY-homologous receiver domain
AVL57_09730	SM00267	diguanylate cyclase
AVL57_09775	SM00028	Tetratricopeptide repeats
AVL57_09810	SM00382	ATPases associated with a variety of cellular activities
AVL57_09815	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AVL57_09840	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AVL57_09845	SM00382	ATPases associated with a variety of cellular activities
AVL57_09845	SM00448	cheY-homologous receiver domain
AVL57_09855	SM00387	Histidine kinase-like ATPases
AVL57_09855	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_09865	SM00052	Putative diguanylate phosphodiesterase
AVL57_09865	SM00267	diguanylate cyclase
AVL57_09875	SM00331	Sigma factor PP2C-like phosphatases
AVL57_09875	SM00448	cheY-homologous receiver domain
AVL57_09890	SM00448	cheY-homologous receiver domain
AVL57_09895	SM00830	Chorismate mutase type II
AVL57_09900	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_09900	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_09905	SM00830	Chorismate mutase type II
AVL57_09965	SM00382	ATPases associated with a variety of cellular activities
AVL57_10010	SM00382	ATPases associated with a variety of cellular activities
AVL57_10010	SM00962	SRP54-type protein, GTPase domain
AVL57_10010	SM00963	SRP54-type protein, helical bundle domain
AVL57_10020	SM01091	Transporter associated domain
AVL57_10030	SM00855	Phosphoglycerate mutase family
AVL57_10040	SM00052	Putative diguanylate phosphodiesterase
AVL57_10040	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_10040	SM00091	PAS domain
AVL57_10040	SM00267	diguanylate cyclase
AVL57_10075	SM00327	von Willebrand factor (vWF) type A domain
AVL57_10080	SM00028	Tetratricopeptide repeats
AVL57_10105	SM00267	diguanylate cyclase
AVL57_10195	SM00487	DEAD-like helicases superfamily
AVL57_10195	SM00490	helicase superfamily c-terminal domain
AVL57_10235	SM00900	AVL57_10235
AVL57_10245	SM00478	endonuclease III
AVL57_10245	SM00525	AVL57_10245
AVL57_10285	SM00028	Tetratricopeptide repeats
AVL57_10290	SM00267	diguanylate cyclase
AVL57_10300	SM00357	Cold shock protein domain
AVL57_10320	SM00479	AVL57_10320
AVL57_10335	SM00965	Secretin and TonB N terminus short domain
AVL57_10365	SM00763	PrkA AAA domain
AVL57_10400	SM00463	Small MutS-related domain
AVL57_10405	SM00387	Histidine kinase-like ATPases
AVL57_10410	SM00382	ATPases associated with a variety of cellular activities
AVL57_10410	SM00448	cheY-homologous receiver domain
AVL57_10425	SM00382	ATPases associated with a variety of cellular activities
AVL57_10435	SM01321	AVL57_10435
AVL57_10475	SM00937	AVL57_10475
AVL57_10510	SM00052	Putative diguanylate phosphodiesterase
AVL57_10510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_10510	SM00091	PAS domain
AVL57_10510	SM00267	diguanylate cyclase
AVL57_10515	SM00836	DALR anticodon binding domain
AVL57_10515	SM01016	Arginyl tRNA synthetase N terminal dom
AVL57_10585	SM00028	Tetratricopeptide repeats
AVL57_10615	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AVL57_10620	SM00028	Tetratricopeptide repeats
AVL57_10635	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AVL57_10670	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AVL57_10675	SM00344	helix_turn_helix ASNC type
AVL57_10690	SM00091	PAS domain
AVL57_10690	SM00382	ATPases associated with a variety of cellular activities
AVL57_10715	SM00382	ATPases associated with a variety of cellular activities
AVL57_10735	SM00382	ATPases associated with a variety of cellular activities
AVL57_10740	SM00382	ATPases associated with a variety of cellular activities
AVL57_10785	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AVL57_10820	SM00947	Carbonic anhydrase
AVL57_10840	SM01018	B12 binding domain
AVL57_10860	SM00260	Two component signalling adaptor domain
AVL57_10865	SM00260	Two component signalling adaptor domain
AVL57_10875	SM00448	cheY-homologous receiver domain
AVL57_10880	SM00073	Histidine Phosphotransfer domain
AVL57_10880	SM00260	Two component signalling adaptor domain
AVL57_10880	SM00387	Histidine kinase-like ATPases
AVL57_10880	SM01231	AVL57_10880
AVL57_10890	SM00448	cheY-homologous receiver domain
AVL57_10905	SM00382	ATPases associated with a variety of cellular activities
AVL57_10905	SM00962	SRP54-type protein, GTPase domain
AVL57_10965	SM00382	ATPases associated with a variety of cellular activities
AVL57_10990	SM00382	ATPases associated with a variety of cellular activities
AVL57_10990	SM00448	cheY-homologous receiver domain
AVL57_10995	SM00387	Histidine kinase-like ATPases
AVL57_10995	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_11000	SM00382	ATPases associated with a variety of cellular activities
AVL57_11025	SM00858	AVL57_11025
AVL57_11045	SM00822	AVL57_11045
AVL57_11160	SM00047	Lysozyme subfamily 2
AVL57_11205	SM00138	Methyltransferase, chemotaxis proteins 
AVL57_11210	SM00260	Two component signalling adaptor domain
AVL57_11210	SM00448	cheY-homologous receiver domain
AVL57_11215	SM00858	AVL57_11215
AVL57_11245	SM00052	Putative diguanylate phosphodiesterase
AVL57_11250	SM00421	helix_turn_helix, Lux Regulon
AVL57_11260	SM00382	ATPases associated with a variety of cellular activities
AVL57_11290	SM00530	Helix-turn-helix XRE-family like proteins 
AVL57_11350	SM00363	S4 RNA-binding domain
AVL57_11355	SM00054	EF-hand, calcium binding motif
AVL57_11360	SM00450	Rhodanese Homology Domain
AVL57_11370	SM00028	Tetratricopeptide repeats
AVL57_11370	SM00448	cheY-homologous receiver domain
AVL57_11385	SM00448	cheY-homologous receiver domain
AVL57_11385	SM00850	LytTr DNA-binding domain
AVL57_11405	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AVL57_11530	SM00354	helix_turn _helix lactose operon repressor
AVL57_11535	SM00642	Alpha-amylase domain
AVL57_11545	SM00642	Alpha-amylase domain
AVL57_11550	SM00642	Alpha-amylase domain
AVL57_11590	SM00881	CoA binding domain
AVL57_11605	SM00861	Transketolase, pyrimidine binding domain
AVL57_11675	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVL57_11700	SM00382	ATPases associated with a variety of cellular activities
AVL57_11715	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AVL57_11715	SM00292	breast cancer carboxy-terminal domain
AVL57_11715	SM00532	Ligase N family
AVL57_11720	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AVL57_11740	SM00028	Tetratricopeptide repeats
AVL57_11795	SM00028	Tetratricopeptide repeats
AVL57_11810	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVL57_11855	SM00458	Ricin-type beta-trefoil
AVL57_11940	SM00052	Putative diguanylate phosphodiesterase
AVL57_11940	SM00267	diguanylate cyclase
AVL57_11940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_11955	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AVL57_11955	SM00267	diguanylate cyclase
AVL57_11975	SM00382	ATPases associated with a variety of cellular activities
AVL57_12015	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVL57_12065	SM00028	Tetratricopeptide repeats
AVL57_12065	SM00448	cheY-homologous receiver domain
AVL57_12070	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AVL57_12090	SM00267	diguanylate cyclase
AVL57_12105	SM01387	AVL57_12105
AVL57_12125	SM00316	Ribosomal protein S1-like RNA-binding domain
AVL57_12135	SM00448	cheY-homologous receiver domain
AVL57_12135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVL57_12140	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_12140	SM00091	PAS domain
AVL57_12140	SM00387	Histidine kinase-like ATPases
AVL57_12140	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_12140	SM00448	cheY-homologous receiver domain
AVL57_12275	SM00829	Enoylreductase
AVL57_12290	SM00855	Phosphoglycerate mutase family
AVL57_12315	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVL57_12320	SM00382	ATPases associated with a variety of cellular activities
AVL57_12350	SM00852	Probable molybdopterin binding domain
AVL57_12575	SM00387	Histidine kinase-like ATPases
AVL57_12575	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_12575	SM00448	cheY-homologous receiver domain
AVL57_12645	SM00052	Putative diguanylate phosphodiesterase
AVL57_12645	SM00267	diguanylate cyclase
AVL57_12650	SM00849	Metallo-beta-lactamase superfamily
AVL57_12690	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AVL57_12695	SM00450	Rhodanese Homology Domain
AVL57_12710	SM00382	ATPases associated with a variety of cellular activities
AVL57_12710	SM00448	cheY-homologous receiver domain
AVL57_12720	SM00387	Histidine kinase-like ATPases
AVL57_12720	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_12725	SM00448	cheY-homologous receiver domain
AVL57_12730	SM00387	Histidine kinase-like ATPases
AVL57_12730	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_12730	SM00448	cheY-homologous receiver domain
AVL57_12795	SM00631	AVL57_12795
AVL57_12800	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AVL57_12815	SM01350	AVL57_12815
AVL57_12820	SM00642	Alpha-amylase domain
AVL57_12825	SM00642	Alpha-amylase domain
AVL57_12835	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AVL57_12900	SM00749	bacterial OsmY and nodulation domain
AVL57_12925	SM00387	Histidine kinase-like ATPases
AVL57_12925	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_12930	SM00448	cheY-homologous receiver domain
AVL57_12930	SM00862	Transcriptional regulatory protein, C terminal
AVL57_12965	SM00822	AVL57_12965
AVL57_12990	SM00354	helix_turn _helix lactose operon repressor
AVL57_12995	SM00858	AVL57_12995
AVL57_13030	SM00710	Parallel beta-helix repeats
AVL57_13040	SM00387	Histidine kinase-like ATPases
AVL57_13040	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_13040	SM00448	cheY-homologous receiver domain
AVL57_13085	SM00354	helix_turn _helix lactose operon repressor
AVL57_13090	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AVL57_13110	SM00052	Putative diguanylate phosphodiesterase
AVL57_13110	SM00267	diguanylate cyclase
AVL57_13155	SM00267	diguanylate cyclase
AVL57_13165	SM00448	cheY-homologous receiver domain
AVL57_13165	SM00862	Transcriptional regulatory protein, C terminal
AVL57_13170	SM00387	Histidine kinase-like ATPases
AVL57_13170	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_13230	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_13230	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_13240	SM01060	AVL57_13240
AVL57_13250	SM00244	prohibitin homologues
AVL57_13265	SM00100	Cyclic nucleotide-monophosphate binding domain
AVL57_13315	SM00849	Metallo-beta-lactamase superfamily
AVL57_13320	SM00257	Lysin motif
AVL57_13335	SM00840	AVL57_13335
AVL57_13350	SM00098	Alkaline phosphatase homologues
AVL57_13355	SM00098	Alkaline phosphatase homologues
AVL57_13370	SM00244	prohibitin homologues
AVL57_13375	SM01321	AVL57_13375
AVL57_13390	SM00382	ATPases associated with a variety of cellular activities
AVL57_13395	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
AVL57_13400	SM01092	CO dehydrogenase flavoprotein C-terminal domain
AVL57_13415	SM00829	Enoylreductase
AVL57_13475	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AVL57_13485	SM01007	Class II Aldolase and Adducin N-terminal domain
AVL57_13490	SM00100	Cyclic nucleotide-monophosphate binding domain
AVL57_13490	SM00419	helix_turn_helix, cAMP Regulatory protein
AVL57_13495	SM00825	Beta-ketoacyl synthase
AVL57_13500	SM00267	diguanylate cyclase
AVL57_13570	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_13640	SM00422	helix_turn_helix, mercury resistance
AVL57_13735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVL57_13775	SM00341	Helicase and RNase D C-terminal
AVL57_13775	SM00474	3'-5' exonuclease
AVL57_13805	SM00487	DEAD-like helicases superfamily
AVL57_13805	SM00488	AVL57_13805
AVL57_13805	SM00491	AVL57_13805
AVL57_13810	SM00642	Alpha-amylase domain
AVL57_13910	SM01236	AVL57_13910
AVL57_13955	SM00387	Histidine kinase-like ATPases
AVL57_13955	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_13960	SM00448	cheY-homologous receiver domain
AVL57_13960	SM00862	Transcriptional regulatory protein, C terminal
AVL57_13965	SM00849	Metallo-beta-lactamase superfamily
AVL57_13990	SM00387	Histidine kinase-like ATPases
AVL57_13995	SM00493	AVL57_13995
AVL57_14020	SM00382	ATPases associated with a variety of cellular activities
AVL57_14045	SM00862	Transcriptional regulatory protein, C terminal
AVL57_14060	SM00091	PAS domain
AVL57_14060	SM00267	diguanylate cyclase
AVL57_14065	SM00054	EF-hand, calcium binding motif
AVL57_14110	SM00028	Tetratricopeptide repeats
AVL57_14115	SM00382	ATPases associated with a variety of cellular activities
AVL57_14115	SM01086	C-terminal, D2-small domain, of ClpB protein
AVL57_14125	SM00363	S4 RNA-binding domain
AVL57_14195	SM00861	Transketolase, pyrimidine binding domain
AVL57_14250	SM00382	ATPases associated with a variety of cellular activities
AVL57_14260	SM00382	ATPases associated with a variety of cellular activities
AVL57_14295	SM00358	Double-stranded RNA binding motif
AVL57_14295	SM00535	Ribonuclease III family
AVL57_14305	SM00838	Elongation factor G C-terminus
AVL57_14360	SM00938	Nitrogen regulatory protein P-II
AVL57_14445	SM00904	Riboflavin kinase
AVL57_14490	SM00563	Phosphate acyltransferases
AVL57_14505	SM00411	bacterial (prokaryotic) histone like domain
AVL57_14510	SM00382	ATPases associated with a variety of cellular activities
AVL57_14510	SM00464	Found in ATP-dependent protease La (LON)
AVL57_14515	SM00382	ATPases associated with a variety of cellular activities
AVL57_14515	SM00994	ClpX C4-type zinc finger
AVL57_14515	SM01086	C-terminal, D2-small domain, of ClpB protein
AVL57_14590	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_14605	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVL57_14605	SM01240	AVL57_14605
AVL57_14620	SM00382	ATPases associated with a variety of cellular activities
AVL57_14625	SM00564	beta-propeller repeat
AVL57_14645	SM00530	Helix-turn-helix XRE-family like proteins 
AVL57_14650	SM00028	Tetratricopeptide repeats
AVL57_14650	SM00257	Lysin motif
AVL57_14660	SM00562	AVL57_14660
AVL57_14690	SM00382	ATPases associated with a variety of cellular activities
AVL57_14730	SM00850	LytTr DNA-binding domain
AVL57_14735	SM00052	Putative diguanylate phosphodiesterase
AVL57_14735	SM00267	diguanylate cyclase
AVL57_14735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_14760	SM01323	AVL57_14760
AVL57_14830	SM00098	Alkaline phosphatase homologues
AVL57_14835	SM00260	Two component signalling adaptor domain
AVL57_14835	SM00448	cheY-homologous receiver domain
AVL57_14880	SM00028	Tetratricopeptide repeats
AVL57_15005	SM00382	ATPases associated with a variety of cellular activities
AVL57_15075	SM00052	Putative diguanylate phosphodiesterase
AVL57_15075	SM00267	diguanylate cyclase
AVL57_15090	SM00354	helix_turn _helix lactose operon repressor
AVL57_15125	SM00460	Transglutaminase/protease-like homologues
AVL57_15140	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AVL57_15165	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AVL57_15170	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_15175	SM00220	Serine/Threonine protein kinases, catalytic domain
AVL57_15225	SM00822	AVL57_15225
AVL57_15265	SM00422	helix_turn_helix, mercury resistance
AVL57_15290	SM00060	Fibronectin type 3 domain
AVL57_15290	SM00631	AVL57_15290
AVL57_15465	SM00642	Alpha-amylase domain
AVL57_15715	SM00382	ATPases associated with a variety of cellular activities
AVL57_15750	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVL57_15770	SM00487	DEAD-like helicases superfamily
AVL57_15770	SM00490	helicase superfamily c-terminal domain
AVL57_15775	SM01322	AVL57_15775
AVL57_15780	SM00347	helix_turn_helix multiple antibiotic resistance protein
AVL57_15805	SM00271	DnaJ molecular chaperone homology domain
AVL57_15825	SM00382	ATPases associated with a variety of cellular activities
AVL57_15850	SM00862	Transcriptional regulatory protein, C terminal
AVL57_15865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVL57_15890	SM00245	tail specific protease
AVL57_15920	SM00090	RIO-like kinase
AVL57_15940	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_15950	SM00487	DEAD-like helicases superfamily
AVL57_15950	SM00490	helicase superfamily c-terminal domain
AVL57_15965	SM00028	Tetratricopeptide repeats
AVL57_15975	SM00327	von Willebrand factor (vWF) type A domain
AVL57_16040	SM01321	AVL57_16040
AVL57_16085	SM00354	helix_turn _helix lactose operon repressor
AVL57_16095	SM00640	Glycosyl hydrolases family 32
AVL57_16145	SM01011	Aminopeptidase P, N-terminal domain
AVL57_16170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AVL57_16170	SM00387	Histidine kinase-like ATPases
AVL57_16170	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_16170	SM00448	cheY-homologous receiver domain
AVL57_16260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVL57_16260	SM00895	AVL57_16260
AVL57_16270	SM00644	AVL57_16270
AVL57_16325	SM00957	SecA DEAD-like domain
AVL57_16325	SM00958	SecA preprotein cross-linking domain
AVL57_16340	SM00864	Tubulin/FtsZ family, GTPase domain
AVL57_16340	SM00865	Tubulin/FtsZ family, C-terminal domain
AVL57_16345	SM00842	Cell division protein FtsA
AVL57_16455	SM00028	Tetratricopeptide repeats
AVL57_16455	SM00267	diguanylate cyclase
AVL57_16465	SM00382	ATPases associated with a variety of cellular activities
AVL57_16465	SM00448	cheY-homologous receiver domain
AVL57_16470	SM00387	Histidine kinase-like ATPases
AVL57_16510	SM00732	Likely ribonuclease with RNase H fold.
AVL57_16520	SM00382	ATPases associated with a variety of cellular activities
AVL57_16550	SM01321	AVL57_16550
AVL57_16595	SM00986	Uracil DNA glycosylase superfamily
AVL57_16595	SM00987	UreE urease accessory protein, C-terminal domain 
AVL57_16620	SM00829	Enoylreductase
AVL57_16625	SM00421	helix_turn_helix, Lux Regulon
AVL57_16625	SM00448	cheY-homologous receiver domain
AVL57_16650	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AVL57_16655	SM00226	Low molecular weight phosphatase family
AVL57_16670	SM00448	cheY-homologous receiver domain
AVL57_16680	SM00448	cheY-homologous receiver domain
AVL57_16680	SM00862	Transcriptional regulatory protein, C terminal
AVL57_16685	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_16685	SM00387	Histidine kinase-like ATPases
AVL57_16685	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_16795	SM00421	helix_turn_helix, Lux Regulon
AVL57_16795	SM00448	cheY-homologous receiver domain
AVL57_16805	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVL57_16805	SM00895	AVL57_16805
AVL57_16830	SM00267	diguanylate cyclase
AVL57_16830	SM00448	cheY-homologous receiver domain
AVL57_16875	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_16875	SM00091	PAS domain
AVL57_16875	SM00387	Histidine kinase-like ATPases
AVL57_16875	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_16875	SM00448	cheY-homologous receiver domain
AVL57_16895	SM00530	Helix-turn-helix XRE-family like proteins 
AVL57_16915	SM00346	helix_turn_helix isocitrate lyase regulation
AVL57_16920	SM00458	Ricin-type beta-trefoil
AVL57_16920	SM00656	AVL57_16920
AVL57_16950	SM00450	Rhodanese Homology Domain
AVL57_17085	SM00448	cheY-homologous receiver domain
AVL57_17100	SM01230	AVL57_17100
AVL57_17110	SM00091	PAS domain
AVL57_17110	SM00387	Histidine kinase-like ATPases
AVL57_17110	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_17115	SM00382	ATPases associated with a variety of cellular activities
AVL57_17115	SM00448	cheY-homologous receiver domain
AVL57_17120	SM00073	Histidine Phosphotransfer domain
AVL57_17125	SM00563	Phosphate acyltransferases
AVL57_17140	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AVL57_17140	SM00091	PAS domain
AVL57_17140	SM00267	diguanylate cyclase
AVL57_17150	SM00387	Histidine kinase-like ATPases
AVL57_17150	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_17150	SM00448	cheY-homologous receiver domain
AVL57_17150	SM01358	AVL57_17150
AVL57_17320	SM00267	diguanylate cyclase
AVL57_17325	SM00996	S-adenosyl-L-homocysteine hydrolase
AVL57_17325	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
AVL57_17375	SM00028	Tetratricopeptide repeats
AVL57_17385	SM00387	Histidine kinase-like ATPases
AVL57_17390	SM01034	Sensors of blue-light using FAD
AVL57_17400	SM00382	ATPases associated with a variety of cellular activities
AVL57_17425	SM00267	diguanylate cyclase
AVL57_17430	SM00028	Tetratricopeptide repeats
AVL57_17430	SM00267	diguanylate cyclase
AVL57_17440	SM00564	beta-propeller repeat
AVL57_17445	SM00062	Bacterial periplasmic substrate-binding proteins
AVL57_17460	SM00382	ATPases associated with a variety of cellular activities
AVL57_17490	SM00729	Elongator protein 3, MiaB family, Radical SAM
AVL57_17515	SM00421	helix_turn_helix, Lux Regulon
AVL57_17515	SM00448	cheY-homologous receiver domain
AVL57_17520	SM00091	PAS domain
AVL57_17520	SM00387	Histidine kinase-like ATPases
AVL57_17520	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_17520	SM00448	cheY-homologous receiver domain
AVL57_17525	SM00897	FIST N domain
AVL57_17525	SM01204	AVL57_17525
AVL57_17530	SM00900	AVL57_17530
AVL57_17540	SM00421	helix_turn_helix, Lux Regulon
AVL57_17540	SM00448	cheY-homologous receiver domain
AVL57_17555	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVL57_17555	SM00895	AVL57_17555
AVL57_17590	SM00710	Parallel beta-helix repeats
AVL57_17605	SM00710	Parallel beta-helix repeats
AVL57_17610	SM00822	AVL57_17610
AVL57_17645	SM00240	Forkhead associated domain
AVL57_17650	SM00331	Sigma factor PP2C-like phosphatases
AVL57_17650	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AVL57_17655	SM00240	Forkhead associated domain
AVL57_17665	SM00240	Forkhead associated domain
AVL57_17680	SM00220	Serine/Threonine protein kinases, catalytic domain
AVL57_17685	SM00331	Sigma factor PP2C-like phosphatases
AVL57_17685	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AVL57_17690	SM00240	Forkhead associated domain
AVL57_17695	SM00240	Forkhead associated domain
AVL57_17695	SM00382	ATPases associated with a variety of cellular activities
AVL57_17700	SM00487	DEAD-like helicases superfamily
AVL57_17700	SM00490	helicase superfamily c-terminal domain
AVL57_17715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVL57_17715	SM00895	AVL57_17715
AVL57_17750	SM00267	diguanylate cyclase
AVL57_17755	SM00155	Phospholipase D. Active site motifs.
AVL57_17785	SM00448	cheY-homologous receiver domain
AVL57_17795	SM00387	Histidine kinase-like ATPases
AVL57_17800	SM00849	Metallo-beta-lactamase superfamily
AVL57_17805	SM00486	DNA polymerase type-B family
AVL57_17810	SM00054	EF-hand, calcium binding motif
AVL57_17840	SM00360	RNA recognition motif
AVL57_17880	SM00986	Uracil DNA glycosylase superfamily
AVL57_17880	SM00987	UreE urease accessory protein, C-terminal domain 
AVL57_17885	SM00052	Putative diguanylate phosphodiesterase
AVL57_17885	SM00267	diguanylate cyclase
AVL57_17885	SM00448	cheY-homologous receiver domain
AVL57_17960	SM00173	Ras subfamily of RAS small GTPases
AVL57_17960	SM00175	Rab subfamily of small GTPases
AVL57_17965	SM00052	Putative diguanylate phosphodiesterase
AVL57_17965	SM00267	diguanylate cyclase
AVL57_17975	SM00563	Phosphate acyltransferases
AVL57_17980	SM00563	Phosphate acyltransferases
AVL57_18105	SM00052	Putative diguanylate phosphodiesterase
AVL57_18105	SM00267	diguanylate cyclase
AVL57_18120	SM00849	Metallo-beta-lactamase superfamily
AVL57_18150	SM00344	helix_turn_helix ASNC type
AVL57_18155	SM00100	Cyclic nucleotide-monophosphate binding domain
AVL57_18165	SM00849	Metallo-beta-lactamase superfamily
AVL57_18205	SM00900	AVL57_18205
AVL57_18290	SM00028	Tetratricopeptide repeats
AVL57_18295	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AVL57_18305	SM00267	diguanylate cyclase
AVL57_18305	SM00448	cheY-homologous receiver domain
AVL57_18310	SM00479	AVL57_18310
AVL57_18315	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVL57_18330	SM00387	Histidine kinase-like ATPases
AVL57_18330	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_18330	SM00448	cheY-homologous receiver domain
AVL57_18360	SM00421	helix_turn_helix, Lux Regulon
AVL57_18360	SM00448	cheY-homologous receiver domain
AVL57_18375	SM00632	AVL57_18375
AVL57_18375	SM00642	Alpha-amylase domain
AVL57_18390	SM01358	AVL57_18390
AVL57_18395	SM00248	ankyrin repeats
AVL57_18400	SM01060	AVL57_18400
AVL57_18460	SM00984	UDP binding domain
AVL57_18580	SM00662	RNA polymerases D
AVL57_18585	SM00363	S4 RNA-binding domain
AVL57_18585	SM01390	AVL57_18585
AVL57_18645	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AVL57_18650	SM01374	AVL57_18650
AVL57_18655	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AVL57_18655	SM00387	Histidine kinase-like ATPases
AVL57_18655	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_18655	SM00448	cheY-homologous receiver domain
AVL57_18670	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AVL57_18675	SM00316	Ribosomal protein S1-like RNA-binding domain
AVL57_18675	SM00357	Cold shock protein domain
AVL57_18675	SM00955	AVL57_18675
AVL57_18690	SM00671	Sel1-like repeats.
AVL57_18740	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_18745	SM00344	helix_turn_helix ASNC type
AVL57_18760	SM00357	Cold shock protein domain
AVL57_18790	SM00448	cheY-homologous receiver domain
AVL57_18800	SM00387	Histidine kinase-like ATPases
AVL57_18805	SM00448	cheY-homologous receiver domain
AVL57_18815	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AVL57_18835	SM00382	ATPases associated with a variety of cellular activities
AVL57_18840	SM00421	helix_turn_helix, Lux Regulon
AVL57_18855	SM00382	ATPases associated with a variety of cellular activities
AVL57_18855	SM01086	C-terminal, D2-small domain, of ClpB protein
AVL57_18870	SM00487	DEAD-like helicases superfamily
AVL57_18870	SM00490	helicase superfamily c-terminal domain
AVL57_18885	SM00919	Malic enzyme, NAD binding domain
AVL57_18885	SM01274	AVL57_18885
AVL57_18935	SM00052	Putative diguanylate phosphodiesterase
AVL57_18940	SM00052	Putative diguanylate phosphodiesterase
AVL57_18950	SM00382	ATPases associated with a variety of cellular activities
AVL57_18955	SM00382	ATPases associated with a variety of cellular activities
AVL57_18955	SM00962	SRP54-type protein, GTPase domain
AVL57_18955	SM00963	SRP54-type protein, helical bundle domain
AVL57_19025	SM00052	Putative diguanylate phosphodiesterase
AVL57_19040	SM00382	ATPases associated with a variety of cellular activities
AVL57_19045	SM00448	cheY-homologous receiver domain
AVL57_19045	SM00862	Transcriptional regulatory protein, C terminal
AVL57_19050	SM00387	Histidine kinase-like ATPases
AVL57_19050	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_19060	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AVL57_19075	SM00116	Domain in cystathionine beta-synthase and other proteins.
AVL57_19140	SM00838	Elongation factor G C-terminus
AVL57_19140	SM00889	Elongation factor G, domain IV
AVL57_19155	SM00663	RNA polymerase I subunit A N-terminus
AVL57_19180	SM00649	Ribosomal protein L11/L12
AVL57_19185	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AVL57_19185	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AVL57_19200	SM00382	ATPases associated with a variety of cellular activities
AVL57_19220	SM00487	DEAD-like helicases superfamily
AVL57_19220	SM00490	helicase superfamily c-terminal domain
AVL57_19230	SM00782	PhnA Zinc-Ribbon
AVL57_19250	SM00642	Alpha-amylase domain
AVL57_19295	SM00247	Beta/gamma crystallins
AVL57_19305	SM00487	DEAD-like helicases superfamily
AVL57_19305	SM00490	helicase superfamily c-terminal domain
AVL57_19395	SM00244	prohibitin homologues
AVL57_19400	SM00244	prohibitin homologues
AVL57_19420	SM01340	AVL57_19420
AVL57_19425	SM00257	Lysin motif
AVL57_19425	SM00646	AVL57_19425
AVL57_19485	SM00382	ATPases associated with a variety of cellular activities
AVL57_19540	SM00387	Histidine kinase-like ATPases
AVL57_19540	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_19555	SM00387	Histidine kinase-like ATPases
AVL57_19560	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AVL57_19565	SM00354	helix_turn _helix lactose operon repressor
AVL57_19585	SM00382	ATPases associated with a variety of cellular activities
AVL57_19645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AVL57_19645	SM00866	AVL57_19645
AVL57_19705	SM00382	ATPases associated with a variety of cellular activities
AVL57_19710	SM00382	ATPases associated with a variety of cellular activities
AVL57_19735	SM00382	ATPases associated with a variety of cellular activities
AVL57_19770	SM00841	Elongation factor P, C-terminal
AVL57_19770	SM01185	AVL57_19770
AVL57_19910	SM00867	YceI-like domain 
AVL57_19945	SM00829	Enoylreductase
AVL57_19950	SM00267	diguanylate cyclase
AVL57_19955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_19955	SM00387	Histidine kinase-like ATPases
AVL57_19955	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_19955	SM00448	cheY-homologous receiver domain
AVL57_19980	SM00382	ATPases associated with a variety of cellular activities
AVL57_20040	SM00420	helix_turn_helix, Deoxyribose operon repressor
AVL57_20040	SM01134	AVL57_20040
AVL57_20050	SM00267	diguanylate cyclase
AVL57_20065	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_20065	SM01009	AlkA N-terminal domain
AVL57_20095	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AVL57_20095	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AVL57_20115	SM00052	Putative diguanylate phosphodiesterase
AVL57_20115	SM00267	diguanylate cyclase
AVL57_20125	SM00883	Chaperonin 10 Kd subunit
AVL57_20155	SM00878	Biotin carboxylase C-terminal domain
AVL57_20175	SM00479	AVL57_20175
AVL57_20175	SM00990	AVL57_20175
AVL57_20200	SM00062	Bacterial periplasmic substrate-binding proteins
AVL57_20220	SM00798	AICARFT/IMPCHase bienzyme
AVL57_20220	SM00851	MGS-like domain
AVL57_20230	SM01209	AVL57_20230
AVL57_20230	SM01210	AVL57_20230
AVL57_20270	SM00448	cheY-homologous receiver domain
AVL57_20270	SM00862	Transcriptional regulatory protein, C terminal
AVL57_20275	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AVL57_20275	SM00387	Histidine kinase-like ATPases
AVL57_20275	SM00388	His Kinase A (phosphoacceptor) domain
AVL57_20295	SM00363	S4 RNA-binding domain
AVL57_20310	SM00382	ATPases associated with a variety of cellular activities
AVL57_20360	SM00849	Metallo-beta-lactamase superfamily
AVL57_20390	SM00867	YceI-like domain 
AVL57_20425	SM00382	ATPases associated with a variety of cellular activities
AVL57_20445	SM00320	WD40 repeats
AVL57_20465	SM00316	Ribosomal protein S1-like RNA-binding domain
AVL57_20465	SM00732	Likely ribonuclease with RNase H fold.
AVL57_20490	SM00631	AVL57_20490
AVL57_20520	SM00342	helix_turn_helix, arabinose operon control protein
AVL57_20520	SM00871	Bacterial transcription activator, effector binding domain
AVL57_20605	SM00563	Phosphate acyltransferases
AVL57_20630	SM00382	ATPases associated with a variety of cellular activities
AVL57_20695	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AVL57_20820	SM00354	helix_turn _helix lactose operon repressor
AVL57_20835	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AVL57_20845	SM01144	AVL57_20845
AVL57_20870	SM00382	ATPases associated with a variety of cellular activities
AVL57_20910	SM00470	ParB-like nuclease domain
AVL57_20925	SM01228	AVL57_20925
