A6F57_00035 SM00530 Helix-turn-helix XRE-family like proteins A6F57_00095 SM00363 S4 RNA-binding domain A6F57_00100 SM00054 EF-hand, calcium binding motif A6F57_00105 SM00450 Rhodanese Homology Domain A6F57_00115 SM00028 Tetratricopeptide repeats A6F57_00115 SM00448 cheY-homologous receiver domain A6F57_00130 SM00448 cheY-homologous receiver domain A6F57_00130 SM00850 LytTr DNA-binding domain A6F57_00150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6F57_00275 SM00354 helix_turn _helix lactose operon repressor A6F57_00280 SM00642 Alpha-amylase domain A6F57_00290 SM00642 Alpha-amylase domain A6F57_00295 SM00642 Alpha-amylase domain A6F57_00335 SM00881 CoA binding domain A6F57_00350 SM00861 Transketolase, pyrimidine binding domain A6F57_00420 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F57_00445 SM00382 ATPases associated with a variety of cellular activities A6F57_00460 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A6F57_00460 SM00292 breast cancer carboxy-terminal domain A6F57_00460 SM00532 Ligase N family A6F57_00465 SM00771 ZipA, C-terminal domain (FtsZ-binding) A6F57_00485 SM00028 Tetratricopeptide repeats A6F57_00540 SM00028 Tetratricopeptide repeats A6F57_00555 SM00347 helix_turn_helix multiple antibiotic resistance protein A6F57_00605 SM00857 Resolvase, N terminal domain A6F57_00650 SM00458 Ricin-type beta-trefoil A6F57_00735 SM00052 Putative diguanylate phosphodiesterase A6F57_00735 SM00267 diguanylate cyclase A6F57_00735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_00750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F57_00750 SM00267 diguanylate cyclase A6F57_00770 SM00382 ATPases associated with a variety of cellular activities A6F57_00815 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F57_00865 SM00028 Tetratricopeptide repeats A6F57_00865 SM00448 cheY-homologous receiver domain A6F57_00870 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F57_00890 SM00267 diguanylate cyclase A6F57_00905 SM01387 A6F57_00905 A6F57_00925 SM00316 Ribosomal protein S1-like RNA-binding domain A6F57_00935 SM00448 cheY-homologous receiver domain A6F57_00935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F57_00940 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_00940 SM00091 PAS domain A6F57_00940 SM00387 Histidine kinase-like ATPases A6F57_00940 SM00388 His Kinase A (phosphoacceptor) domain A6F57_00940 SM00448 cheY-homologous receiver domain A6F57_01075 SM00829 Enoylreductase A6F57_01115 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F57_01120 SM00382 ATPases associated with a variety of cellular activities A6F57_01150 SM00852 Probable molybdopterin binding domain A6F57_01355 SM00387 Histidine kinase-like ATPases A6F57_01355 SM00388 His Kinase A (phosphoacceptor) domain A6F57_01355 SM00448 cheY-homologous receiver domain A6F57_01425 SM00052 Putative diguanylate phosphodiesterase A6F57_01425 SM00267 diguanylate cyclase A6F57_01430 SM00849 Metallo-beta-lactamase superfamily A6F57_01470 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A6F57_01475 SM00450 Rhodanese Homology Domain A6F57_01490 SM00382 ATPases associated with a variety of cellular activities A6F57_01490 SM00448 cheY-homologous receiver domain A6F57_01505 SM00448 cheY-homologous receiver domain A6F57_01510 SM00387 Histidine kinase-like ATPases A6F57_01510 SM00388 His Kinase A (phosphoacceptor) domain A6F57_01510 SM00448 cheY-homologous receiver domain A6F57_01575 SM00631 A6F57_01575 A6F57_01580 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6F57_01595 SM01350 A6F57_01595 A6F57_01600 SM00642 Alpha-amylase domain A6F57_01605 SM00642 Alpha-amylase domain A6F57_01615 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6F57_01680 SM00749 bacterial OsmY and nodulation domain A6F57_01705 SM00387 Histidine kinase-like ATPases A6F57_01705 SM00388 His Kinase A (phosphoacceptor) domain A6F57_01710 SM00448 cheY-homologous receiver domain A6F57_01710 SM00862 Transcriptional regulatory protein, C terminal A6F57_01745 SM00822 A6F57_01745 A6F57_01770 SM00354 helix_turn _helix lactose operon repressor A6F57_01775 SM00858 A6F57_01775 A6F57_01820 SM00387 Histidine kinase-like ATPases A6F57_01820 SM00388 His Kinase A (phosphoacceptor) domain A6F57_01820 SM00448 cheY-homologous receiver domain A6F57_01870 SM00354 helix_turn _helix lactose operon repressor A6F57_01895 SM00052 Putative diguanylate phosphodiesterase A6F57_01895 SM00267 diguanylate cyclase A6F57_01940 SM00267 diguanylate cyclase A6F57_01950 SM00448 cheY-homologous receiver domain A6F57_01950 SM00862 Transcriptional regulatory protein, C terminal A6F57_01955 SM00387 Histidine kinase-like ATPases A6F57_01955 SM00388 His Kinase A (phosphoacceptor) domain A6F57_02015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_02015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_02025 SM01060 A6F57_02025 A6F57_02035 SM00244 prohibitin homologues A6F57_02050 SM00100 Cyclic nucleotide-monophosphate binding domain A6F57_02100 SM00849 Metallo-beta-lactamase superfamily A6F57_02105 SM00257 Lysin motif A6F57_02140 SM00354 helix_turn _helix lactose operon repressor A6F57_02190 SM00840 A6F57_02190 A6F57_02205 SM00098 Alkaline phosphatase homologues A6F57_02210 SM00098 Alkaline phosphatase homologues A6F57_02225 SM00244 prohibitin homologues A6F57_02230 SM01321 A6F57_02230 A6F57_02245 SM00382 ATPases associated with a variety of cellular activities A6F57_02250 SM00382 ATPases associated with a variety of cellular activities A6F57_02255 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A6F57_02260 SM01092 CO dehydrogenase flavoprotein C-terminal domain A6F57_02275 SM00829 Enoylreductase A6F57_02335 SM00859 Semialdehyde dehydrogenase, NAD binding domain A6F57_02345 SM01007 Class II Aldolase and Adducin N-terminal domain A6F57_02350 SM00100 Cyclic nucleotide-monophosphate binding domain A6F57_02350 SM00419 helix_turn_helix, cAMP Regulatory protein A6F57_02355 SM00825 Beta-ketoacyl synthase A6F57_02360 SM00267 diguanylate cyclase A6F57_02510 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F57_02550 SM00341 Helicase and RNase D C-terminal A6F57_02550 SM00474 3'-5' exonuclease A6F57_02580 SM00487 DEAD-like helicases superfamily A6F57_02580 SM00488 A6F57_02580 A6F57_02580 SM00491 A6F57_02580 A6F57_02585 SM00642 Alpha-amylase domain A6F57_02745 SM00387 Histidine kinase-like ATPases A6F57_02750 SM00493 A6F57_02750 A6F57_02775 SM00382 ATPases associated with a variety of cellular activities A6F57_02800 SM00862 Transcriptional regulatory protein, C terminal A6F57_02820 SM00054 EF-hand, calcium binding motif A6F57_02870 SM00028 Tetratricopeptide repeats A6F57_02875 SM00382 ATPases associated with a variety of cellular activities A6F57_02875 SM01086 C-terminal, D2-small domain, of ClpB protein A6F57_02885 SM00363 S4 RNA-binding domain A6F57_02955 SM00861 Transketolase, pyrimidine binding domain A6F57_03010 SM00382 ATPases associated with a variety of cellular activities A6F57_03020 SM00382 ATPases associated with a variety of cellular activities A6F57_03055 SM00358 Double-stranded RNA binding motif A6F57_03055 SM00535 Ribonuclease III family A6F57_03120 SM00938 Nitrogen regulatory protein P-II A6F57_03205 SM00904 Riboflavin kinase A6F57_03250 SM00563 Phosphate acyltransferases A6F57_03265 SM00411 bacterial (prokaryotic) histone like domain A6F57_03270 SM00382 ATPases associated with a variety of cellular activities A6F57_03270 SM00464 Found in ATP-dependent protease La (LON) A6F57_03275 SM00382 ATPases associated with a variety of cellular activities A6F57_03275 SM00994 ClpX C4-type zinc finger A6F57_03275 SM01086 C-terminal, D2-small domain, of ClpB protein A6F57_03350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_03365 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F57_03365 SM01240 A6F57_03365 A6F57_03380 SM00382 ATPases associated with a variety of cellular activities A6F57_03385 SM00564 beta-propeller repeat A6F57_03405 SM00530 Helix-turn-helix XRE-family like proteins A6F57_03410 SM00028 Tetratricopeptide repeats A6F57_03410 SM00257 Lysin motif A6F57_03420 SM00562 A6F57_03420 A6F57_03450 SM00382 ATPases associated with a variety of cellular activities A6F57_03490 SM00850 LytTr DNA-binding domain A6F57_03495 SM00052 Putative diguanylate phosphodiesterase A6F57_03495 SM00267 diguanylate cyclase A6F57_03495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_03520 SM01323 A6F57_03520 A6F57_03590 SM00098 Alkaline phosphatase homologues A6F57_03595 SM00260 Two component signalling adaptor domain A6F57_03595 SM00448 cheY-homologous receiver domain A6F57_03640 SM00028 Tetratricopeptide repeats A6F57_03835 SM00052 Putative diguanylate phosphodiesterase A6F57_03835 SM00267 diguanylate cyclase A6F57_03850 SM00354 helix_turn _helix lactose operon repressor A6F57_03885 SM00460 Transglutaminase/protease-like homologues A6F57_03900 SM00967 RNA 2'-O ribose methyltransferase substrate binding A6F57_03925 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A6F57_03930 SM00342 helix_turn_helix, arabinose operon control protein A6F57_03935 SM00220 Serine/Threonine protein kinases, catalytic domain A6F57_03980 SM00822 A6F57_03980 A6F57_04020 SM00422 helix_turn_helix, mercury resistance A6F57_04045 SM00060 Fibronectin type 3 domain A6F57_04045 SM00631 A6F57_04045 A6F57_04220 SM00642 Alpha-amylase domain A6F57_04450 SM00422 helix_turn_helix, mercury resistance A6F57_04515 SM00382 ATPases associated with a variety of cellular activities A6F57_04550 SM00347 helix_turn_helix multiple antibiotic resistance protein A6F57_04570 SM01322 A6F57_04570 A6F57_04575 SM00347 helix_turn_helix multiple antibiotic resistance protein A6F57_04600 SM00271 DnaJ molecular chaperone homology domain A6F57_04625 SM00862 Transcriptional regulatory protein, C terminal A6F57_04640 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F57_04665 SM00245 tail specific protease A6F57_04695 SM00090 RIO-like kinase A6F57_04715 SM00342 helix_turn_helix, arabinose operon control protein A6F57_04730 SM00487 DEAD-like helicases superfamily A6F57_04730 SM00490 helicase superfamily c-terminal domain A6F57_04745 SM00028 Tetratricopeptide repeats A6F57_04755 SM00327 von Willebrand factor (vWF) type A domain A6F57_04815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F57_04830 SM00382 ATPases associated with a variety of cellular activities A6F57_04845 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A6F57_04870 SM00382 ATPases associated with a variety of cellular activities A6F57_04910 SM00382 ATPases associated with a variety of cellular activities A6F57_04950 SM00354 helix_turn _helix lactose operon repressor A6F57_04960 SM00640 Glycosyl hydrolases family 32 A6F57_05010 SM01011 Aminopeptidase P, N-terminal domain A6F57_05035 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F57_05035 SM00387 Histidine kinase-like ATPases A6F57_05035 SM00388 His Kinase A (phosphoacceptor) domain A6F57_05035 SM00448 cheY-homologous receiver domain A6F57_05125 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F57_05125 SM00895 A6F57_05125 A6F57_05135 SM00644 A6F57_05135 A6F57_05190 SM00957 SecA DEAD-like domain A6F57_05190 SM00958 SecA preprotein cross-linking domain A6F57_05205 SM00864 Tubulin/FtsZ family, GTPase domain A6F57_05205 SM00865 Tubulin/FtsZ family, C-terminal domain A6F57_05210 SM00842 Cell division protein FtsA A6F57_05320 SM00028 Tetratricopeptide repeats A6F57_05320 SM00267 diguanylate cyclase A6F57_05330 SM00382 ATPases associated with a variety of cellular activities A6F57_05330 SM00448 cheY-homologous receiver domain A6F57_05335 SM00387 Histidine kinase-like ATPases A6F57_05375 SM00732 Likely ribonuclease with RNase H fold. A6F57_05385 SM00382 ATPases associated with a variety of cellular activities A6F57_05415 SM01321 A6F57_05415 A6F57_05460 SM00986 Uracil DNA glycosylase superfamily A6F57_05460 SM00987 UreE urease accessory protein, C-terminal domain A6F57_05485 SM00829 Enoylreductase A6F57_05490 SM00421 helix_turn_helix, Lux Regulon A6F57_05490 SM00448 cheY-homologous receiver domain A6F57_05515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A6F57_05520 SM00226 Low molecular weight phosphatase family A6F57_05535 SM00448 cheY-homologous receiver domain A6F57_05545 SM00448 cheY-homologous receiver domain A6F57_05545 SM00862 Transcriptional regulatory protein, C terminal A6F57_05550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_05550 SM00387 Histidine kinase-like ATPases A6F57_05550 SM00388 His Kinase A (phosphoacceptor) domain A6F57_05650 SM00421 helix_turn_helix, Lux Regulon A6F57_05650 SM00448 cheY-homologous receiver domain A6F57_05660 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F57_05660 SM00895 A6F57_05660 A6F57_05685 SM00267 diguanylate cyclase A6F57_05685 SM00448 cheY-homologous receiver domain A6F57_05730 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_05730 SM00091 PAS domain A6F57_05730 SM00387 Histidine kinase-like ATPases A6F57_05730 SM00388 His Kinase A (phosphoacceptor) domain A6F57_05730 SM00448 cheY-homologous receiver domain A6F57_05750 SM00530 Helix-turn-helix XRE-family like proteins A6F57_05755 SM00656 A6F57_05755 A6F57_05770 SM00346 helix_turn_helix isocitrate lyase regulation A6F57_05775 SM00458 Ricin-type beta-trefoil A6F57_05775 SM00656 A6F57_05775 A6F57_05805 SM00450 Rhodanese Homology Domain A6F57_05940 SM00448 cheY-homologous receiver domain A6F57_05955 SM01230 A6F57_05955 A6F57_05965 SM00091 PAS domain A6F57_05965 SM00387 Histidine kinase-like ATPases A6F57_05965 SM00388 His Kinase A (phosphoacceptor) domain A6F57_05970 SM00382 ATPases associated with a variety of cellular activities A6F57_05970 SM00448 cheY-homologous receiver domain A6F57_05975 SM00073 Histidine Phosphotransfer domain A6F57_05980 SM00563 Phosphate acyltransferases A6F57_05995 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_05995 SM00091 PAS domain A6F57_05995 SM00267 diguanylate cyclase A6F57_06005 SM00387 Histidine kinase-like ATPases A6F57_06005 SM00388 His Kinase A (phosphoacceptor) domain A6F57_06005 SM00448 cheY-homologous receiver domain A6F57_06005 SM01358 A6F57_06005 A6F57_06130 SM00267 diguanylate cyclase A6F57_06135 SM00996 S-adenosyl-L-homocysteine hydrolase A6F57_06135 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A6F57_06185 SM00028 Tetratricopeptide repeats A6F57_06195 SM00387 Histidine kinase-like ATPases A6F57_06200 SM01034 Sensors of blue-light using FAD A6F57_06210 SM00382 ATPases associated with a variety of cellular activities A6F57_06235 SM00267 diguanylate cyclase A6F57_06240 SM00028 Tetratricopeptide repeats A6F57_06240 SM00267 diguanylate cyclase A6F57_06250 SM00564 beta-propeller repeat A6F57_06255 SM00062 Bacterial periplasmic substrate-binding proteins A6F57_06270 SM00382 ATPases associated with a variety of cellular activities A6F57_06300 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F57_06325 SM00421 helix_turn_helix, Lux Regulon A6F57_06325 SM00448 cheY-homologous receiver domain A6F57_06330 SM00091 PAS domain A6F57_06330 SM00387 Histidine kinase-like ATPases A6F57_06330 SM00388 His Kinase A (phosphoacceptor) domain A6F57_06330 SM00448 cheY-homologous receiver domain A6F57_06335 SM00897 FIST N domain A6F57_06335 SM01204 A6F57_06335 A6F57_06340 SM00900 A6F57_06340 A6F57_06350 SM00421 helix_turn_helix, Lux Regulon A6F57_06350 SM00448 cheY-homologous receiver domain A6F57_06365 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F57_06365 SM00895 A6F57_06365 A6F57_06400 SM00710 Parallel beta-helix repeats A6F57_06415 SM00710 Parallel beta-helix repeats A6F57_06420 SM00822 A6F57_06420 A6F57_06455 SM00240 Forkhead associated domain A6F57_06460 SM00331 Sigma factor PP2C-like phosphatases A6F57_06460 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A6F57_06465 SM00240 Forkhead associated domain A6F57_06475 SM00240 Forkhead associated domain A6F57_06490 SM00220 Serine/Threonine protein kinases, catalytic domain A6F57_06495 SM00331 Sigma factor PP2C-like phosphatases A6F57_06495 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A6F57_06505 SM00240 Forkhead associated domain A6F57_06510 SM00240 Forkhead associated domain A6F57_06510 SM00382 ATPases associated with a variety of cellular activities A6F57_06520 SM00487 DEAD-like helicases superfamily A6F57_06520 SM00490 helicase superfamily c-terminal domain A6F57_06535 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F57_06535 SM00895 A6F57_06535 A6F57_06570 SM00267 diguanylate cyclase A6F57_06575 SM00155 Phospholipase D. Active site motifs. A6F57_06605 SM00448 cheY-homologous receiver domain A6F57_06615 SM00387 Histidine kinase-like ATPases A6F57_06620 SM00849 Metallo-beta-lactamase superfamily A6F57_06625 SM00486 DNA polymerase type-B family A6F57_06630 SM00054 EF-hand, calcium binding motif A6F57_06665 SM00360 RNA recognition motif A6F57_06705 SM00986 Uracil DNA glycosylase superfamily A6F57_06705 SM00987 UreE urease accessory protein, C-terminal domain A6F57_06710 SM00052 Putative diguanylate phosphodiesterase A6F57_06710 SM00267 diguanylate cyclase A6F57_06710 SM00448 cheY-homologous receiver domain A6F57_06785 SM00173 Ras subfamily of RAS small GTPases A6F57_06785 SM00175 Rab subfamily of small GTPases A6F57_06790 SM00052 Putative diguanylate phosphodiesterase A6F57_06790 SM00267 diguanylate cyclase A6F57_06800 SM00563 Phosphate acyltransferases A6F57_06805 SM00563 Phosphate acyltransferases A6F57_06930 SM00052 Putative diguanylate phosphodiesterase A6F57_06930 SM00267 diguanylate cyclase A6F57_06945 SM00849 Metallo-beta-lactamase superfamily A6F57_06975 SM00344 helix_turn_helix ASNC type A6F57_06980 SM00849 Metallo-beta-lactamase superfamily A6F57_07020 SM00900 A6F57_07020 A6F57_07115 SM00028 Tetratricopeptide repeats A6F57_07120 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. A6F57_07130 SM00267 diguanylate cyclase A6F57_07130 SM00448 cheY-homologous receiver domain A6F57_07135 SM00479 A6F57_07135 A6F57_07155 SM00387 Histidine kinase-like ATPases A6F57_07155 SM00388 His Kinase A (phosphoacceptor) domain A6F57_07155 SM00448 cheY-homologous receiver domain A6F57_07185 SM00421 helix_turn_helix, Lux Regulon A6F57_07185 SM00448 cheY-homologous receiver domain A6F57_07200 SM00632 A6F57_07200 A6F57_07200 SM00642 Alpha-amylase domain A6F57_07215 SM01358 A6F57_07215 A6F57_07220 SM00248 ankyrin repeats A6F57_07225 SM01060 A6F57_07225 A6F57_07335 SM00984 UDP binding domain A6F57_07500 SM00662 RNA polymerases D A6F57_07505 SM00363 S4 RNA-binding domain A6F57_07505 SM01390 A6F57_07505 A6F57_07565 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A6F57_07570 SM01374 A6F57_07570 A6F57_07575 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F57_07575 SM00387 Histidine kinase-like ATPases A6F57_07575 SM00388 His Kinase A (phosphoacceptor) domain A6F57_07575 SM00448 cheY-homologous receiver domain A6F57_07590 SM00967 RNA 2'-O ribose methyltransferase substrate binding A6F57_07595 SM00316 Ribosomal protein S1-like RNA-binding domain A6F57_07595 SM00357 Cold shock protein domain A6F57_07595 SM00955 A6F57_07595 A6F57_07610 SM00671 Sel1-like repeats. A6F57_07660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_07665 SM00344 helix_turn_helix ASNC type A6F57_07680 SM00357 Cold shock protein domain A6F57_07710 SM00448 cheY-homologous receiver domain A6F57_07720 SM00387 Histidine kinase-like ATPases A6F57_07725 SM00448 cheY-homologous receiver domain A6F57_07735 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A6F57_07755 SM00382 ATPases associated with a variety of cellular activities A6F57_07760 SM00421 helix_turn_helix, Lux Regulon A6F57_07775 SM00382 ATPases associated with a variety of cellular activities A6F57_07775 SM01086 C-terminal, D2-small domain, of ClpB protein A6F57_07790 SM00487 DEAD-like helicases superfamily A6F57_07790 SM00490 helicase superfamily c-terminal domain A6F57_07805 SM00919 Malic enzyme, NAD binding domain A6F57_07805 SM01274 A6F57_07805 A6F57_07855 SM00052 Putative diguanylate phosphodiesterase A6F57_07860 SM00052 Putative diguanylate phosphodiesterase A6F57_07870 SM00382 ATPases associated with a variety of cellular activities A6F57_07875 SM00382 ATPases associated with a variety of cellular activities A6F57_07875 SM00962 SRP54-type protein, GTPase domain A6F57_07875 SM00963 SRP54-type protein, helical bundle domain A6F57_07945 SM00052 Putative diguanylate phosphodiesterase A6F57_07960 SM00382 ATPases associated with a variety of cellular activities A6F57_07965 SM00448 cheY-homologous receiver domain A6F57_07965 SM00862 Transcriptional regulatory protein, C terminal A6F57_07970 SM00387 Histidine kinase-like ATPases A6F57_07970 SM00388 His Kinase A (phosphoacceptor) domain A6F57_07980 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F57_07995 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F57_08060 SM00838 Elongation factor G C-terminus A6F57_08060 SM00889 Elongation factor G, domain IV A6F57_08075 SM00663 RNA polymerase I subunit A N-terminus A6F57_08100 SM00649 Ribosomal protein L11/L12 A6F57_08105 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A6F57_08105 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A6F57_08120 SM00382 ATPases associated with a variety of cellular activities A6F57_08140 SM00487 DEAD-like helicases superfamily A6F57_08140 SM00490 helicase superfamily c-terminal domain A6F57_08150 SM00782 PhnA Zinc-Ribbon A6F57_08170 SM00642 Alpha-amylase domain A6F57_08215 SM00247 Beta/gamma crystallins A6F57_08225 SM00487 DEAD-like helicases superfamily A6F57_08225 SM00490 helicase superfamily c-terminal domain A6F57_08315 SM00244 prohibitin homologues A6F57_08320 SM00244 prohibitin homologues A6F57_08340 SM01340 A6F57_08340 A6F57_08345 SM00257 Lysin motif A6F57_08345 SM00646 A6F57_08345 A6F57_08460 SM00387 Histidine kinase-like ATPases A6F57_08460 SM00388 His Kinase A (phosphoacceptor) domain A6F57_08470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_08475 SM00387 Histidine kinase-like ATPases A6F57_08480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_08485 SM00354 helix_turn _helix lactose operon repressor A6F57_08505 SM00382 ATPases associated with a variety of cellular activities A6F57_08565 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F57_08565 SM00866 A6F57_08565 A6F57_08625 SM00382 ATPases associated with a variety of cellular activities A6F57_08630 SM00382 ATPases associated with a variety of cellular activities A6F57_08655 SM00382 ATPases associated with a variety of cellular activities A6F57_08690 SM00841 Elongation factor P, C-terminal A6F57_08690 SM01185 A6F57_08690 A6F57_08830 SM00867 YceI-like domain A6F57_08865 SM00829 Enoylreductase A6F57_08870 SM00267 diguanylate cyclase A6F57_08875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_08875 SM00387 Histidine kinase-like ATPases A6F57_08875 SM00388 His Kinase A (phosphoacceptor) domain A6F57_08875 SM00448 cheY-homologous receiver domain A6F57_08900 SM00382 ATPases associated with a variety of cellular activities A6F57_09005 SM00420 helix_turn_helix, Deoxyribose operon repressor A6F57_09005 SM01134 A6F57_09005 A6F57_09015 SM00267 diguanylate cyclase A6F57_09030 SM00342 helix_turn_helix, arabinose operon control protein A6F57_09030 SM01009 AlkA N-terminal domain A6F57_09060 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A6F57_09060 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A6F57_09080 SM00833 Cobalamin synthesis protein cobW C-terminal domain A6F57_09090 SM00052 Putative diguanylate phosphodiesterase A6F57_09090 SM00267 diguanylate cyclase A6F57_09100 SM00883 Chaperonin 10 Kd subunit A6F57_09130 SM00878 Biotin carboxylase C-terminal domain A6F57_09150 SM00479 A6F57_09150 A6F57_09150 SM00990 A6F57_09150 A6F57_09175 SM00062 Bacterial periplasmic substrate-binding proteins A6F57_09195 SM00798 AICARFT/IMPCHase bienzyme A6F57_09195 SM00851 MGS-like domain A6F57_09205 SM01209 A6F57_09205 A6F57_09205 SM01210 A6F57_09205 A6F57_09245 SM00448 cheY-homologous receiver domain A6F57_09245 SM00862 Transcriptional regulatory protein, C terminal A6F57_09250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_09250 SM00387 Histidine kinase-like ATPases A6F57_09250 SM00388 His Kinase A (phosphoacceptor) domain A6F57_09270 SM00363 S4 RNA-binding domain A6F57_09285 SM00382 ATPases associated with a variety of cellular activities A6F57_09335 SM00849 Metallo-beta-lactamase superfamily A6F57_09365 SM00867 YceI-like domain A6F57_09400 SM00382 ATPases associated with a variety of cellular activities A6F57_09420 SM00320 WD40 repeats A6F57_09440 SM00316 Ribosomal protein S1-like RNA-binding domain A6F57_09440 SM00732 Likely ribonuclease with RNase H fold. A6F57_09465 SM00631 A6F57_09465 A6F57_09495 SM00342 helix_turn_helix, arabinose operon control protein A6F57_09495 SM00871 Bacterial transcription activator, effector binding domain A6F57_09580 SM00563 Phosphate acyltransferases A6F57_09670 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A6F57_09795 SM00354 helix_turn _helix lactose operon repressor A6F57_09810 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F57_09820 SM01144 A6F57_09820 A6F57_09845 SM00382 ATPases associated with a variety of cellular activities A6F57_09885 SM00470 ParB-like nuclease domain A6F57_09900 SM01228 A6F57_09900 A6F57_09945 SM00382 ATPases associated with a variety of cellular activities A6F57_09945 SM00760 Bacterial dnaA protein helix-turn-helix domain A6F57_09950 SM00480 DNA polymerase III beta subunit A6F57_09960 SM00387 Histidine kinase-like ATPases A6F57_09960 SM00433 TopoisomeraseII A6F57_09975 SM00836 DALR anticodon binding domain A6F57_10010 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A6F57_10010 SM00474 3'-5' exonuclease A6F57_10010 SM00475 5'-3' exonuclease A6F57_10010 SM00482 DNA polymerase A domain A6F57_10045 SM00257 Lysin motif A6F57_10165 SM00481 DNA polymerase alpha chain like domain A6F57_10265 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A6F57_10265 SM01232 A6F57_10265 A6F57_10295 SM00052 Putative diguanylate phosphodiesterase A6F57_10295 SM00267 diguanylate cyclase A6F57_10305 SM00829 Enoylreductase A6F57_10310 SM00450 Rhodanese Homology Domain A6F57_10345 SM00052 Putative diguanylate phosphodiesterase A6F57_10345 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F57_10345 SM00267 diguanylate cyclase A6F57_10390 SM00974 A6F57_10390 A6F57_10500 SM00989 A6F57_10500 A6F57_10510 SM00342 helix_turn_helix, arabinose operon control protein A6F57_10585 SM00346 helix_turn_helix isocitrate lyase regulation A6F57_10595 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A6F57_10615 SM00028 Tetratricopeptide repeats A6F57_10620 SM00387 Histidine kinase-like ATPases A6F57_10620 SM00388 His Kinase A (phosphoacceptor) domain A6F57_10620 SM00448 cheY-homologous receiver domain A6F57_10650 SM00382 ATPases associated with a variety of cellular activities A6F57_10675 SM00849 Metallo-beta-lactamase superfamily A6F57_10705 SM00876 Biotin and Thiamin Synthesis associated domain A6F57_10770 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F57_10830 SM00267 diguanylate cyclase A6F57_10840 SM00072 Guanylate kinase homologues. A6F57_10845 SM01409 A6F57_10845 A6F57_10850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F57_10850 SM00954 Region found in RelA / SpoT proteins A6F57_10865 SM00487 DEAD-like helicases superfamily A6F57_10865 SM00490 helicase superfamily c-terminal domain A6F57_10900 SM00382 ATPases associated with a variety of cellular activities A6F57_10905 SM00052 Putative diguanylate phosphodiesterase A6F57_10905 SM00267 diguanylate cyclase A6F57_10945 SM00028 Tetratricopeptide repeats A6F57_10945 SM00267 diguanylate cyclase A6F57_10975 SM00271 DnaJ molecular chaperone homology domain A6F57_11010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_11030 SM00052 Putative diguanylate phosphodiesterase A6F57_11030 SM00267 diguanylate cyclase A6F57_11050 SM00341 Helicase and RNase D C-terminal A6F57_11050 SM00487 DEAD-like helicases superfamily A6F57_11050 SM00490 helicase superfamily c-terminal domain A6F57_11050 SM00956 A6F57_11050 A6F57_11060 SM00924 MgtE intracellular N domain A6F57_11070 SM00267 diguanylate cyclase A6F57_11070 SM00448 cheY-homologous receiver domain A6F57_11080 SM00971 Serine acetyltransferase, N-terminal A6F57_11120 SM00014 Acid phosphatase homologues A6F57_11160 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F57_11195 SM00354 helix_turn _helix lactose operon repressor A6F57_11235 SM00448 cheY-homologous receiver domain A6F57_11240 SM00073 Histidine Phosphotransfer domain A6F57_11240 SM00387 Histidine kinase-like ATPases A6F57_11240 SM00388 His Kinase A (phosphoacceptor) domain A6F57_11240 SM00448 cheY-homologous receiver domain A6F57_11250 SM01130 A6F57_11250 A6F57_11300 SM00420 helix_turn_helix, Deoxyribose operon repressor A6F57_11300 SM01134 A6F57_11300 A6F57_11335 SM00965 Secretin and TonB N terminus short domain A6F57_11415 SM00316 Ribosomal protein S1-like RNA-binding domain A6F57_11435 SM00634 Bacterial Ig-like domain (group 1) A6F57_11450 SM00342 helix_turn_helix, arabinose operon control protein A6F57_11455 SM01038 Beta galactosidase small chain A6F57_11460 SM00448 cheY-homologous receiver domain A6F57_11460 SM00862 Transcriptional regulatory protein, C terminal A6F57_11465 SM00387 Histidine kinase-like ATPases A6F57_11490 SM00478 endonuclease III A6F57_11490 SM00525 A6F57_11490 A6F57_11525 SM00448 cheY-homologous receiver domain A6F57_11525 SM00862 Transcriptional regulatory protein, C terminal A6F57_11535 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_11540 SM00448 cheY-homologous receiver domain A6F57_11545 SM00073 Histidine Phosphotransfer domain A6F57_11545 SM00260 Two component signalling adaptor domain A6F57_11545 SM00387 Histidine kinase-like ATPases A6F57_11545 SM01231 A6F57_11545 A6F57_11550 SM00260 Two component signalling adaptor domain A6F57_11555 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_11555 SM00091 PAS domain A6F57_11555 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_11560 SM00138 Methyltransferase, chemotaxis proteins A6F57_11570 SM00448 cheY-homologous receiver domain A6F57_11600 SM00354 helix_turn _helix lactose operon repressor A6F57_11625 SM00342 helix_turn_helix, arabinose operon control protein A6F57_11625 SM00387 Histidine kinase-like ATPases A6F57_11625 SM00388 His Kinase A (phosphoacceptor) domain A6F57_11625 SM00448 cheY-homologous receiver domain A6F57_11645 SM00354 helix_turn _helix lactose operon repressor A6F57_11700 SM00855 Phosphoglycerate mutase family A6F57_11710 SM00671 Sel1-like repeats. A6F57_11715 SM00382 ATPases associated with a variety of cellular activities A6F57_11720 SM01403 A6F57_11720 A6F57_11740 SM01382 A6F57_11740 A6F57_11740 SM01383 A6F57_11740 A6F57_11755 SM00322 K homology RNA-binding domain A6F57_11805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_11805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_11830 SM00487 DEAD-like helicases superfamily A6F57_11830 SM00490 helicase superfamily c-terminal domain A6F57_11860 SM00342 helix_turn_helix, arabinose operon control protein A6F57_11875 SM00938 Nitrogen regulatory protein P-II A6F57_11895 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain A6F57_11930 SM00073 Histidine Phosphotransfer domain A6F57_11930 SM00387 Histidine kinase-like ATPases A6F57_11930 SM00388 His Kinase A (phosphoacceptor) domain A6F57_11930 SM00448 cheY-homologous receiver domain A6F57_11935 SM00434 DNA Topoisomerase IV A6F57_11945 SM00052 Putative diguanylate phosphodiesterase A6F57_11945 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_11945 SM00267 diguanylate cyclase A6F57_11950 SM01150 A6F57_11950 A6F57_12025 SM00965 Secretin and TonB N terminus short domain A6F57_12045 SM00842 Cell division protein FtsA A6F57_12055 SM00919 Malic enzyme, NAD binding domain A6F57_12055 SM01274 A6F57_12055 A6F57_12085 SM00028 Tetratricopeptide repeats A6F57_12125 SM00859 Semialdehyde dehydrogenase, NAD binding domain A6F57_12130 SM00851 MGS-like domain A6F57_12155 SM00448 cheY-homologous receiver domain A6F57_12155 SM00862 Transcriptional regulatory protein, C terminal A6F57_12160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_12160 SM00387 Histidine kinase-like ATPases A6F57_12160 SM00388 His Kinase A (phosphoacceptor) domain A6F57_12190 SM00450 Rhodanese Homology Domain A6F57_12235 SM00479 A6F57_12235 A6F57_12255 SM00028 Tetratricopeptide repeats A6F57_12310 SM00267 diguanylate cyclase A6F57_12315 SM01004 Delta-aminolevulinic acid dehydratase A6F57_12325 SM00487 DEAD-like helicases superfamily A6F57_12325 SM00490 helicase superfamily c-terminal domain A6F57_12335 SM00357 Cold shock protein domain A6F57_12335 SM00382 ATPases associated with a variety of cellular activities A6F57_12335 SM00959 Rho termination factor, N-terminal domain A6F57_12345 SM00387 Histidine kinase-like ATPases A6F57_12345 SM00388 His Kinase A (phosphoacceptor) domain A6F57_12345 SM00448 cheY-homologous receiver domain A6F57_12355 SM01001 AIR carboxylase A6F57_12405 SM00788 Adenylosuccinate synthetase A6F57_12455 SM01005 Alanine racemase, C-terminal domain A6F57_12480 SM00062 Bacterial periplasmic substrate-binding proteins A6F57_12505 SM00360 RNA recognition motif A6F57_12515 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F57_12605 SM00382 ATPases associated with a variety of cellular activities A6F57_12610 SM00901 A6F57_12610 A6F57_12710 SM00257 Lysin motif A6F57_12755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_12755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_12755 SM01049 A6F57_12755 A6F57_12780 SM00448 cheY-homologous receiver domain A6F57_12780 SM00862 Transcriptional regulatory protein, C terminal A6F57_12785 SM00388 His Kinase A (phosphoacceptor) domain A6F57_12790 SM00287 Bacterial SH3 domain homologues A6F57_12795 SM01118 A6F57_12795 A6F57_12805 SM00927 DNA mismatch repair enzyme MutH A6F57_12815 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F57_12835 SM00448 cheY-homologous receiver domain A6F57_12840 SM00267 diguanylate cyclase A6F57_12845 SM00387 Histidine kinase-like ATPases A6F57_12845 SM00388 His Kinase A (phosphoacceptor) domain A6F57_12845 SM00448 cheY-homologous receiver domain A6F57_12870 SM00487 DEAD-like helicases superfamily A6F57_12870 SM00490 helicase superfamily c-terminal domain A6F57_12875 SM00670 Large family of predicted nucleotide-binding domains A6F57_12885 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F57_12885 SM00895 A6F57_12885 A6F57_12905 SM00829 Enoylreductase A6F57_12930 SM00342 helix_turn_helix, arabinose operon control protein A6F57_12975 SM00346 helix_turn_helix isocitrate lyase regulation A6F57_12980 SM00345 helix_turn_helix gluconate operon transcriptional repressor A6F57_12980 SM00895 A6F57_12980 A6F57_13000 SM00028 Tetratricopeptide repeats A6F57_13070 SM00635 Bacterial Ig-like domain 2 A6F57_13095 SM00487 DEAD-like helicases superfamily A6F57_13095 SM00490 helicase superfamily c-terminal domain A6F57_13100 SM00028 Tetratricopeptide repeats A6F57_13135 SM00387 Histidine kinase-like ATPases A6F57_13135 SM00433 TopoisomeraseII A6F57_13140 SM00052 Putative diguanylate phosphodiesterase A6F57_13140 SM00091 PAS domain A6F57_13140 SM00138 Methyltransferase, chemotaxis proteins A6F57_13140 SM00267 diguanylate cyclase A6F57_13145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F57_13175 SM00841 Elongation factor P, C-terminal A6F57_13175 SM01185 A6F57_13175 A6F57_13220 SM00014 Acid phosphatase homologues A6F57_13230 SM01012 A6F57_13230 A6F57_13255 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A6F57_13270 SM00091 PAS domain A6F57_13270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_13285 SM00382 ATPases associated with a variety of cellular activities A6F57_13355 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A6F57_13360 SM01007 Class II Aldolase and Adducin N-terminal domain A6F57_13390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_13390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_13400 SM00400 zinc finger A6F57_13400 SM00493 A6F57_13400 A6F57_13400 SM00766 DNA primase DnaG DnaB-binding A6F57_13425 SM01207 A6F57_13425 A6F57_13430 SM00905 Dihydroneopterin aldolase A6F57_13465 SM00530 Helix-turn-helix XRE-family like proteins A6F57_13475 SM00387 Histidine kinase-like ATPases A6F57_13480 SM00448 cheY-homologous receiver domain A6F57_13480 SM00862 Transcriptional regulatory protein, C terminal A6F57_13485 SM00387 Histidine kinase-like ATPases A6F57_13485 SM00388 His Kinase A (phosphoacceptor) domain A6F57_13495 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F57_13500 SM00710 Parallel beta-helix repeats A6F57_13535 SM00028 Tetratricopeptide repeats A6F57_13545 SM00448 cheY-homologous receiver domain A6F57_13545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F57_13550 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_13550 SM00091 PAS domain A6F57_13550 SM00387 Histidine kinase-like ATPases A6F57_13550 SM00388 His Kinase A (phosphoacceptor) domain A6F57_13550 SM00448 cheY-homologous receiver domain A6F57_13595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_13595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_13610 SM00650 Ribosomal RNA adenine dimethylases A6F57_13630 SM00271 DnaJ molecular chaperone homology domain A6F57_13675 SM00954 Region found in RelA / SpoT proteins A6F57_13715 SM00965 Secretin and TonB N terminus short domain A6F57_13720 SM00631 A6F57_13720 A6F57_13770 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F57_13770 SM00924 MgtE intracellular N domain A6F57_13800 SM00382 ATPases associated with a variety of cellular activities A6F57_13830 SM00382 ATPases associated with a variety of cellular activities A6F57_13865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6F57_13870 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6F57_13895 SM00342 helix_turn_helix, arabinose operon control protein A6F57_13925 SM00052 Putative diguanylate phosphodiesterase A6F57_13925 SM00267 diguanylate cyclase A6F57_13930 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_13930 SM00387 Histidine kinase-like ATPases A6F57_13930 SM00388 His Kinase A (phosphoacceptor) domain A6F57_13930 SM00448 cheY-homologous receiver domain A6F57_13940 SM00342 helix_turn_helix, arabinose operon control protein A6F57_13960 SM01118 A6F57_13960 A6F57_13970 SM00861 Transketolase, pyrimidine binding domain A6F57_13975 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A6F57_14020 SM00382 ATPases associated with a variety of cellular activities A6F57_14070 SM00267 diguanylate cyclase A6F57_14090 SM00342 helix_turn_helix, arabinose operon control protein A6F57_14110 SM00342 helix_turn_helix, arabinose operon control protein A6F57_14125 SM00758 A6F57_14125 A6F57_14125 SM01217 A6F57_14125 A6F57_14130 SM00347 helix_turn_helix multiple antibiotic resistance protein A6F57_14140 SM01263 A6F57_14140 A6F57_14155 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_14155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_14170 SM00267 diguanylate cyclase A6F57_14195 SM00382 ATPases associated with a variety of cellular activities A6F57_14305 SM00448 cheY-homologous receiver domain A6F57_14310 SM00091 PAS domain A6F57_14330 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F57_14340 SM00487 DEAD-like helicases superfamily A6F57_14340 SM00490 helicase superfamily c-terminal domain A6F57_14350 SM00382 ATPases associated with a variety of cellular activities A6F57_14375 SM01329 A6F57_14375 A6F57_14380 SM00917 LeuA allosteric (dimerisation) domain A6F57_14400 SM01192 A6F57_14400 A6F57_14400 SM01193 A6F57_14400 A6F57_14410 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A6F57_14410 SM00534 ATPase domain of DNA mismatch repair MUTS family A6F57_14420 SM00382 ATPases associated with a variety of cellular activities A6F57_14425 SM00382 ATPases associated with a variety of cellular activities A6F57_14450 SM00382 ATPases associated with a variety of cellular activities A6F57_14520 SM00382 ATPases associated with a variety of cellular activities A6F57_14560 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A6F57_14565 SM01329 A6F57_14565 A6F57_14585 SM00267 diguanylate cyclase A6F57_14675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F57_14720 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6F57_14730 SM00935 Outer membrane protein (OmpH-like) A6F57_14755 SM00481 DNA polymerase alpha chain like domain A6F57_14765 SM00977 TilS substrate C-terminal domain A6F57_14770 SM00267 diguanylate cyclase A6F57_14790 SM00062 Bacterial periplasmic substrate-binding proteins A6F57_14795 SM01211 A6F57_14795 A6F57_14800 SM00463 Small MutS-related domain A6F57_14805 SM00062 Bacterial periplasmic substrate-binding proteins A6F57_14805 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A6F57_14815 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A6F57_14835 SM00421 helix_turn_helix, Lux Regulon A6F57_14840 SM00052 Putative diguanylate phosphodiesterase A6F57_14870 SM00858 A6F57_14870 A6F57_14875 SM00260 Two component signalling adaptor domain A6F57_14875 SM00448 cheY-homologous receiver domain A6F57_14880 SM00138 Methyltransferase, chemotaxis proteins A6F57_14925 SM00047 Lysozyme subfamily 2 A6F57_15060 SM00822 A6F57_15060 A6F57_15080 SM00858 A6F57_15080 A6F57_15110 SM00382 ATPases associated with a variety of cellular activities A6F57_15115 SM00387 Histidine kinase-like ATPases A6F57_15115 SM00388 His Kinase A (phosphoacceptor) domain A6F57_15120 SM00382 ATPases associated with a variety of cellular activities A6F57_15120 SM00448 cheY-homologous receiver domain A6F57_15145 SM00382 ATPases associated with a variety of cellular activities A6F57_15205 SM00382 ATPases associated with a variety of cellular activities A6F57_15205 SM00962 SRP54-type protein, GTPase domain A6F57_15220 SM00448 cheY-homologous receiver domain A6F57_15230 SM00073 Histidine Phosphotransfer domain A6F57_15230 SM00260 Two component signalling adaptor domain A6F57_15230 SM00387 Histidine kinase-like ATPases A6F57_15230 SM01231 A6F57_15230 A6F57_15235 SM00448 cheY-homologous receiver domain A6F57_15245 SM00260 Two component signalling adaptor domain A6F57_15250 SM00260 Two component signalling adaptor domain A6F57_15270 SM01018 B12 binding domain A6F57_15290 SM00947 Carbonic anhydrase A6F57_15325 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A6F57_15370 SM00382 ATPases associated with a variety of cellular activities A6F57_15375 SM00382 ATPases associated with a variety of cellular activities A6F57_15395 SM00382 ATPases associated with a variety of cellular activities A6F57_15420 SM00091 PAS domain A6F57_15420 SM00382 ATPases associated with a variety of cellular activities A6F57_15435 SM00344 helix_turn_helix ASNC type A6F57_15440 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A6F57_15475 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F57_15490 SM00028 Tetratricopeptide repeats A6F57_15495 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A6F57_15525 SM00028 Tetratricopeptide repeats A6F57_15595 SM00836 DALR anticodon binding domain A6F57_15595 SM01016 Arginyl tRNA synthetase N terminal dom A6F57_15600 SM00052 Putative diguanylate phosphodiesterase A6F57_15600 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_15600 SM00091 PAS domain A6F57_15600 SM00267 diguanylate cyclase A6F57_15635 SM00937 A6F57_15635 A6F57_15675 SM01321 A6F57_15675 A6F57_15685 SM00382 ATPases associated with a variety of cellular activities A6F57_15700 SM00382 ATPases associated with a variety of cellular activities A6F57_15700 SM00448 cheY-homologous receiver domain A6F57_15705 SM00387 Histidine kinase-like ATPases A6F57_15710 SM00463 Small MutS-related domain A6F57_15745 SM00763 PrkA AAA domain A6F57_15775 SM00965 Secretin and TonB N terminus short domain A6F57_15790 SM00479 A6F57_15790 A6F57_15810 SM00357 Cold shock protein domain A6F57_15820 SM00267 diguanylate cyclase A6F57_15825 SM00028 Tetratricopeptide repeats A6F57_15845 SM00478 endonuclease III A6F57_15845 SM00525 A6F57_15845 A6F57_15855 SM00900 A6F57_15855 A6F57_15895 SM00487 DEAD-like helicases superfamily A6F57_15895 SM00490 helicase superfamily c-terminal domain A6F57_15985 SM00267 diguanylate cyclase A6F57_16010 SM00028 Tetratricopeptide repeats A6F57_16015 SM00327 von Willebrand factor (vWF) type A domain A6F57_16050 SM00052 Putative diguanylate phosphodiesterase A6F57_16050 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_16050 SM00091 PAS domain A6F57_16050 SM00267 diguanylate cyclase A6F57_16060 SM00855 Phosphoglycerate mutase family A6F57_16070 SM01091 Transporter associated domain A6F57_16080 SM00382 ATPases associated with a variety of cellular activities A6F57_16080 SM00962 SRP54-type protein, GTPase domain A6F57_16080 SM00963 SRP54-type protein, helical bundle domain A6F57_16125 SM00382 ATPases associated with a variety of cellular activities A6F57_16185 SM00830 Chorismate mutase type II A6F57_16190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_16190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_16195 SM00830 Chorismate mutase type II A6F57_16200 SM00448 cheY-homologous receiver domain A6F57_16215 SM00331 Sigma factor PP2C-like phosphatases A6F57_16215 SM00448 cheY-homologous receiver domain A6F57_16225 SM00052 Putative diguanylate phosphodiesterase A6F57_16225 SM00267 diguanylate cyclase A6F57_16235 SM00387 Histidine kinase-like ATPases A6F57_16235 SM00388 His Kinase A (phosphoacceptor) domain A6F57_16245 SM00382 ATPases associated with a variety of cellular activities A6F57_16245 SM00448 cheY-homologous receiver domain A6F57_16250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F57_16275 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A6F57_16280 SM00382 ATPases associated with a variety of cellular activities A6F57_16315 SM00028 Tetratricopeptide repeats A6F57_16390 SM00267 diguanylate cyclase A6F57_16440 SM00028 Tetratricopeptide repeats A6F57_16440 SM00387 Histidine kinase-like ATPases A6F57_16440 SM00388 His Kinase A (phosphoacceptor) domain A6F57_16440 SM00448 cheY-homologous receiver domain A6F57_16470 SM00859 Semialdehyde dehydrogenase, NAD binding domain A6F57_16495 SM00829 Enoylreductase A6F57_16500 SM00829 Enoylreductase A6F57_16505 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F57_16510 SM00479 A6F57_16510 A6F57_16555 SM00267 diguanylate cyclase A6F57_16620 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F57_16620 SM00876 Biotin and Thiamin Synthesis associated domain A6F57_16645 SM00226 Low molecular weight phosphatase family A6F57_16655 SM00382 ATPases associated with a variety of cellular activities A6F57_16675 SM00382 ATPases associated with a variety of cellular activities A6F57_16680 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F57_16690 SM00028 Tetratricopeptide repeats A6F57_16690 SM00448 cheY-homologous receiver domain A6F57_16755 SM01321 A6F57_16755 A6F57_16770 SM00382 ATPases associated with a variety of cellular activities A6F57_16785 SM00905 Dihydroneopterin aldolase A6F57_16795 SM00387 Histidine kinase-like ATPases A6F57_16800 SM00448 cheY-homologous receiver domain A6F57_16800 SM00862 Transcriptional regulatory protein, C terminal A6F57_16850 SM00481 DNA polymerase alpha chain like domain A6F57_16870 SM00363 S4 RNA-binding domain A6F57_16885 SM01266 A6F57_16885 A6F57_16950 SM00421 helix_turn_helix, Lux Regulon A6F57_16950 SM00448 cheY-homologous receiver domain A6F57_16955 SM00387 Histidine kinase-like ATPases A6F57_16955 SM00388 His Kinase A (phosphoacceptor) domain A6F57_16955 SM00448 cheY-homologous receiver domain A6F57_16970 SM00271 DnaJ molecular chaperone homology domain A6F57_16980 SM00052 Putative diguanylate phosphodiesterase A6F57_16980 SM00091 PAS domain A6F57_17000 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A6F57_17005 SM00851 MGS-like domain A6F57_17005 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A6F57_17015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_17055 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F57_17055 SM01091 Transporter associated domain A6F57_17070 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F57_17090 SM00903 Flavin reductase like domain A6F57_17140 SM00829 Enoylreductase A6F57_17150 SM00052 Putative diguanylate phosphodiesterase A6F57_17150 SM00267 diguanylate cyclase A6F57_17155 SM01400 A6F57_17155 A6F57_17180 SM00937 A6F57_17180 A6F57_17230 SM00838 Elongation factor G C-terminus A6F57_17230 SM00889 Elongation factor G, domain IV A6F57_17235 SM01116 A6F57_17235 A6F57_17240 SM00331 Sigma factor PP2C-like phosphatases A6F57_17240 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A6F57_17250 SM00460 Transglutaminase/protease-like homologues A6F57_17280 SM00052 Putative diguanylate phosphodiesterase A6F57_17280 SM00267 diguanylate cyclase A6F57_17360 SM00028 Tetratricopeptide repeats A6F57_17360 SM00267 diguanylate cyclase A6F57_17380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_17380 SM00091 PAS domain A6F57_17380 SM00267 diguanylate cyclase A6F57_17410 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A6F57_17415 SM01092 CO dehydrogenase flavoprotein C-terminal domain A6F57_17450 SM00052 Putative diguanylate phosphodiesterase A6F57_17450 SM00091 PAS domain A6F57_17450 SM00267 diguanylate cyclase A6F57_17450 SM00448 cheY-homologous receiver domain A6F57_17455 SM00267 diguanylate cyclase A6F57_17455 SM00448 cheY-homologous receiver domain A6F57_17460 SM00387 Histidine kinase-like ATPases A6F57_17460 SM00388 His Kinase A (phosphoacceptor) domain A6F57_17460 SM00448 cheY-homologous receiver domain A6F57_17545 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A6F57_17615 SM00052 Putative diguanylate phosphodiesterase A6F57_17615 SM00267 diguanylate cyclase A6F57_17665 SM00710 Parallel beta-helix repeats A6F57_17695 SM00873 B3/4 domain A6F57_17695 SM00874 tRNA synthetase B5 domain A6F57_17695 SM00896 Ferredoxin-fold anticodon binding domain A6F57_17700 SM00411 bacterial (prokaryotic) histone like domain A6F57_17740 SM00487 DEAD-like helicases superfamily A6F57_17740 SM00490 helicase superfamily c-terminal domain A6F57_17740 SM00982 A6F57_17740 A6F57_17740 SM01058 CarD-like/TRCF domain A6F57_17830 SM00052 Putative diguanylate phosphodiesterase A6F57_17830 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F57_17830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A6F57_17830 SM00091 PAS domain A6F57_17830 SM00267 diguanylate cyclase A6F57_17835 SM01321 A6F57_17835 A6F57_17845 SM00878 Biotin carboxylase C-terminal domain A6F57_17865 SM00422 helix_turn_helix, mercury resistance A6F57_17875 SM00062 Bacterial periplasmic substrate-binding proteins A6F57_17875 SM00267 diguanylate cyclase A6F57_17885 SM00479 A6F57_17885 A6F57_17890 SM00387 Histidine kinase-like ATPases A6F57_17890 SM00388 His Kinase A (phosphoacceptor) domain A6F57_17890 SM00448 cheY-homologous receiver domain A6F57_17895 SM00116 Domain in cystathionine beta-synthase and other proteins. A6F57_17920 SM00342 helix_turn_helix, arabinose operon control protein A6F57_17930 SM00382 ATPases associated with a variety of cellular activities A6F57_17930 SM00487 DEAD-like helicases superfamily A6F57_17930 SM00490 helicase superfamily c-terminal domain A6F57_17930 SM00847 Helicase associated domain (HA2) Add an annotation A6F57_17945 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A6F57_17950 SM00829 Enoylreductase A6F57_17960 SM00479 A6F57_17960 A6F57_17990 SM00052 Putative diguanylate phosphodiesterase A6F57_17995 SM00382 ATPases associated with a variety of cellular activities A6F57_18010 SM00634 Bacterial Ig-like domain (group 1) A6F57_18020 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A6F57_18020 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A6F57_18020 SM00493 A6F57_18020 A6F57_18090 SM00587 ZnF_C4 abd HLH domain containing kinases domain A6F57_18095 SM00316 Ribosomal protein S1-like RNA-binding domain A6F57_18100 SM00363 S4 RNA-binding domain A6F57_18135 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A6F57_18140 SM00822 A6F57_18140 A6F57_18150 SM00825 Beta-ketoacyl synthase A6F57_18190 SM00267 diguanylate cyclase A6F57_18255 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A6F57_18275 SM00354 helix_turn _helix lactose operon repressor A6F57_18305 SM00710 Parallel beta-helix repeats A6F57_18425 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. A6F57_18430 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain A6F57_18460 SM00357 Cold shock protein domain A6F57_18470 SM00382 ATPases associated with a variety of cellular activities A6F57_18470 SM01086 C-terminal, D2-small domain, of ClpB protein A6F57_18475 SM00316 Ribosomal protein S1-like RNA-binding domain A6F57_18505 SM00731 SprT homologues. A6F57_18535 SM00870 A6F57_18535 A6F57_18545 SM00729 Elongator protein 3, MiaB family, Radical SAM A6F57_18560 SM00936 Penicillin-binding protein 5, C-terminal domain A6F57_18620 SM01103 A6F57_18620 A6F57_18630 SM00382 ATPases associated with a variety of cellular activities A6F57_18660 SM00052 Putative diguanylate phosphodiesterase A6F57_18660 SM00267 diguanylate cyclase A6F57_18660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_18670 SM00046 Diacylglycerol kinase catalytic domain (presumed) A6F57_18670 SM00195 Dual specificity phosphatase, catalytic domain A6F57_18710 SM00507 HNH nucleases A6F57_18715 SM00316 Ribosomal protein S1-like RNA-binding domain A6F57_18715 SM00322 K homology RNA-binding domain A6F57_18725 SM00382 ATPases associated with a variety of cellular activities A6F57_18805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F57_18810 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A6F57_18860 SM00796 Allophanate hydrolase subunit 1 A6F57_18865 SM00797 Allophanate hydrolase subunit 2 A6F57_18875 SM00354 helix_turn _helix lactose operon repressor A6F57_18895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A6F57_18895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A6F57_18915 SM00528 Domain in histone-like proteins of HNS family A6F57_18925 SM00893 Electron transfer flavoprotein domain A6F57_18930 SM00893 Electron transfer flavoprotein domain A6F57_18960 SM00342 helix_turn_helix, arabinose operon control protein A6F57_18995 SM00563 Phosphate acyltransferases A6F57_19040 SM00382 ATPases associated with a variety of cellular activities A6F57_19060 SM00852 Probable molybdopterin binding domain A6F57_19065 SM00642 Alpha-amylase domain A6F57_19095 SM00421 helix_turn_helix, Lux Regulon A6F57_19095 SM00448 cheY-homologous receiver domain A6F57_19180 SM01130 A6F57_19180 A6F57_19220 SM00382 ATPases associated with a variety of cellular activities A6F57_19310 SM01321 A6F57_19310 A6F57_19330 SM00422 helix_turn_helix, mercury resistance A6F57_19345 SM00382 ATPases associated with a variety of cellular activities A6F57_19370 SM00448 cheY-homologous receiver domain A6F57_19370 SM00862 Transcriptional regulatory protein, C terminal A6F57_19375 SM00387 Histidine kinase-like ATPases A6F57_19375 SM00388 His Kinase A (phosphoacceptor) domain A6F57_19400 SM00434 DNA Topoisomerase IV A6F57_19420 SM00316 Ribosomal protein S1-like RNA-binding domain A6F57_19425 SM00411 bacterial (prokaryotic) histone like domain A6F57_19440 SM00028 Tetratricopeptide repeats A6F57_19445 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A6F57_19450 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A6F57_19450 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A6F57_19455 SM00344 helix_turn_helix ASNC type A6F57_19460 SM00843 A6F57_19460 A6F57_19470 SM00382 ATPases associated with a variety of cellular activities A6F57_19535 SM00448 cheY-homologous receiver domain A6F57_19535 SM00862 Transcriptional regulatory protein, C terminal A6F57_19540 SM00388 His Kinase A (phosphoacceptor) domain A6F57_19590 SM00421 helix_turn_helix, Lux Regulon A6F57_19590 SM00448 cheY-homologous receiver domain A6F57_19595 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A6F57_19595 SM00465 GIY-YIG type nucleases (URI domain) A6F57_19700 SM00530 Helix-turn-helix XRE-family like proteins A6F57_19705 SM00530 Helix-turn-helix XRE-family like proteins A6F57_19890 SM01144 A6F57_19890 A6F57_19900 SM00450 Rhodanese Homology Domain A6F57_19920 SM00047 Lysozyme subfamily 2 A6F57_19945 SM00100 Cyclic nucleotide-monophosphate binding domain A6F57_19945 SM00419 helix_turn_helix, cAMP Regulatory protein A6F57_20050 SM00530 Helix-turn-helix XRE-family like proteins A6F57_20065 SM00530 Helix-turn-helix XRE-family like proteins A6F57_20115 SM00382 ATPases associated with a variety of cellular activities A6F57_20125 SM00981 A6F57_20125 A6F57_20180 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A6F57_20180 SM00245 tail specific protease A6F57_20185 SM00945 ProQ/FINO family A6F57_20195 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A6F57_20220 SM00220 Serine/Threonine protein kinases, catalytic domain A6F57_20235 SM00861 Transketolase, pyrimidine binding domain A6F57_20280 SM00387 Histidine kinase-like ATPases A6F57_20295 SM00882 Coenzyme A transferase A6F57_20300 SM00882 Coenzyme A transferase