locus-tag class description ALE3EI_0001 IPR003593 AAA+ ATPase domain ALE3EI_0001 IPR001957 Chromosomal replication control, initiator DnaA ALE3EI_0001 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0001 IPR038454 DnaA, N-terminal domain superfamily ALE3EI_0001 IPR013159 Chromosomal replication initiator, DnaA C-terminal ALE3EI_0001 IPR013317 Chromosomal replication initiator protein DnaA ALE3EI_0001 IPR024633 DnaA N-terminal domain ALE3EI_0001 IPR018312 Chromosomal replication control, initiator DnaA, conserved site ALE3EI_0001 IPR020591 Chromosomal replication control, initiator DnaA-like ALE3EI_0001 IPR010921 Trp repressor/replication initiator ALE3EI_0002 IPR036196 Phosphotyrosine protein phosphatase I superfamily ALE3EI_0002 IPR023485 Phosphotyrosine protein phosphatase I ALE3EI_0002 IPR017867 Protein-tyrosine phosphatase, low molecular weight ALE3EI_0004 IPR008189 rRNA small subunit methyltransferase I ALE3EI_0004 IPR035996 Tetrapyrrole methylase superfamily ALE3EI_0004 IPR014776 Tetrapyrrole methylase, subdomain 2 ALE3EI_0004 IPR014777 Tetrapyrrole methylase, subdomain 1 ALE3EI_0004 IPR000878 Tetrapyrrole methylase ALE3EI_0007 IPR003770 Endolytic murein transglycosylase ALE3EI_0009 IPR018510 Diaminopimelate epimerase, active site ALE3EI_0009 IPR001653 Diaminopimelate epimerase, DapF ALE3EI_0010 IPR036034 PDZ superfamily ALE3EI_0010 IPR011782 Peptidase S1C, Do ALE3EI_0010 IPR009003 Peptidase S1, PA clan ALE3EI_0010 IPR001940 Peptidase S1C ALE3EI_0010 IPR041489 PDZ domain 6 ALE3EI_0010 IPR001478 PDZ domain ALE3EI_0011 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family ALE3EI_0011 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site ALE3EI_0011 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain ALE3EI_0011 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I ALE3EI_0011 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain ALE3EI_0011 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0012 IPR000182 GNAT domain ALE3EI_0012 IPR016181 Acyl-CoA N-acyltransferase ALE3EI_0014 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal ALE3EI_0014 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain ALE3EI_0014 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria ALE3EI_0014 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALE3EI_0014 IPR029028 Alpha/beta knot methyltransferases ALE3EI_0016 IPR038657 Ribosomal protein L19 superfamily ALE3EI_0016 IPR008991 Translation protein SH3-like domain superfamily ALE3EI_0016 IPR001857 Ribosomal protein L19 ALE3EI_0017 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric ALE3EI_0018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ ALE3EI_0018 IPR001347 Sugar isomerase (SIS) ALE3EI_0018 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein ALE3EI_0018 IPR005486 Glucokinase regulatory protein, conserved site ALE3EI_0021 IPR006195 Aminoacyl-tRNA synthetase, class II ALE3EI_0021 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) ALE3EI_0021 IPR036621 Anticodon-binding domain superfamily ALE3EI_0021 IPR004095 TGS ALE3EI_0021 IPR012676 TGS-like ALE3EI_0021 IPR002320 Threonine-tRNA ligase, class IIa ALE3EI_0021 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily ALE3EI_0021 IPR033728 Threonine-tRNA ligase catalytic core domain ALE3EI_0021 IPR012947 Threonyl/alanyl tRNA synthetase, SAD ALE3EI_0021 IPR004154 Anticodon-binding ALE3EI_0021 IPR012675 Beta-grasp domain superfamily ALE3EI_0022 IPR019815 Translation initiation factor 3, C-terminal ALE3EI_0022 IPR001288 Translation initiation factor 3 ALE3EI_0022 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily ALE3EI_0022 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily ALE3EI_0022 IPR019814 Translation initiation factor 3, N-terminal ALE3EI_0023 IPR001706 Ribosomal protein L35, non-mitochondrial ALE3EI_0023 IPR037229 Ribosomal protein L35 superfamily ALE3EI_0023 IPR018265 Ribosomal protein L35, conserved site ALE3EI_0023 IPR021137 Ribosomal protein L35 ALE3EI_0024 IPR005813 Ribosomal protein L20 ALE3EI_0024 IPR035566 Ribosomal protein L20, C-terminal ALE3EI_0028 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_0028 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA ALE3EI_0033 IPR007816 ResB-like domain ALE3EI_0033 IPR002541 Cytochrome c assembly protein ALE3EI_0034 IPR003593 AAA+ ATPase domain ALE3EI_0034 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0034 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ALE3EI_0034 IPR007693 DNA helicase, DnaB-like, N-terminal ALE3EI_0034 IPR007694 DNA helicase, DnaB-like, C-terminal ALE3EI_0034 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily ALE3EI_0034 IPR007692 DNA helicase, DnaB type ALE3EI_0035 IPR001095 Acetyl-CoA carboxylase, alpha subunit ALE3EI_0035 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal ALE3EI_0035 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_0038 IPR002616 tRNA-guanine(15) transglycosylase-like ALE3EI_0038 IPR004803 tRNA-guanine transglycosylase ALE3EI_0038 IPR036511 Queuine tRNA-ribosyltransferase-like ALE3EI_0040 IPR029061 Thiamin diphosphate-binding fold ALE3EI_0040 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ALE3EI_0040 IPR005475 Transketolase-like, pyrimidine-binding domain ALE3EI_0040 IPR033248 Transketolase, C-terminal domain ALE3EI_0042 IPR025708 Heat shock protein 15 ALE3EI_0042 IPR002942 RNA-binding S4 domain ALE3EI_0042 IPR036986 RNA-binding S4 domain superfamily ALE3EI_0043 IPR000836 Phosphoribosyltransferase domain ALE3EI_0043 IPR029057 Phosphoribosyltransferase-like ALE3EI_0043 IPR023050 Bifunctional protein PyrR ALE3EI_0044 IPR000623 Shikimate kinase/Threonine synthase-like 1 ALE3EI_0044 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0044 IPR031322 Shikimate kinase/gluconokinase ALE3EI_0046 IPR002937 Amine oxidase ALE3EI_0046 IPR014105 Carotenoid/retinoid oxidoreductase ALE3EI_0046 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_0047 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head ALE3EI_0047 IPR008949 Isoprenoid synthase domain superfamily ALE3EI_0047 IPR002060 Squalene/phytoene synthase ALE3EI_0047 IPR019845 Squalene/phytoene synthase, conserved site ALE3EI_0050 IPR013740 Redoxin ALE3EI_0050 IPR013766 Thioredoxin domain ALE3EI_0050 IPR017937 Thioredoxin, conserved site ALE3EI_0050 IPR036249 Thioredoxin-like superfamily ALE3EI_0050 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE ALE3EI_0052 IPR018136 Aconitase family, 4Fe-4S cluster binding site ALE3EI_0052 IPR036008 Aconitase, iron-sulfur domain ALE3EI_0052 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain ALE3EI_0052 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 ALE3EI_0052 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain ALE3EI_0052 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ALE3EI_0052 IPR006249 Aconitase/Iron-responsive element-binding protein 2 ALE3EI_0053 IPR002656 Acyltransferase 3 ALE3EI_0053 IPR036514 SGNH hydrolase superfamily ALE3EI_0055 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0055 IPR041628 ChlI/MoxR, AAA lid domain ALE3EI_0055 IPR011703 ATPase, AAA-3 ALE3EI_0056 IPR023059 Foldase protein PrsA ALE3EI_0056 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type ALE3EI_0056 IPR027304 Trigger factor/SurA domain superfamily ALE3EI_0058 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site ALE3EI_0058 IPR027304 Trigger factor/SurA domain superfamily ALE3EI_0058 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type ALE3EI_0058 IPR023059 Foldase protein PrsA ALE3EI_0062 IPR013785 Aldolase-type TIM barrel ALE3EI_0062 IPR000644 CBS domain ALE3EI_0062 IPR005990 Inosine-5'-monophosphate dehydrogenase ALE3EI_0062 IPR015875 IMP dehydrogenase / GMP reductase, conserved site ALE3EI_0062 IPR001093 IMP dehydrogenase/GMP reductase ALE3EI_0067 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ALE3EI_0067 IPR041498 Bacterial Ig domain ALE3EI_0067 IPR006179 5'-Nucleotidase/apyrase ALE3EI_0067 IPR006146 5'-Nucleotidase, conserved site ALE3EI_0067 IPR036907 5'-Nucleotidase, C-terminal domain superfamily ALE3EI_0067 IPR008334 5'-Nucleotidase, C-terminal ALE3EI_0067 IPR029052 Metallo-dependent phosphatase-like ALE3EI_0068 IPR013785 Aldolase-type TIM barrel ALE3EI_0068 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site ALE3EI_0068 IPR027167 Hydroxymethylglutaryl-CoA lyase ALE3EI_0068 IPR000891 Pyruvate carboxyltransferase ALE3EI_0069 IPR001123 Amino acid exporter protein, LeuE-type ALE3EI_0070 IPR005719 Dihydroorotate dehydrogenase, class 2 ALE3EI_0070 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 ALE3EI_0070 IPR001295 Dihydroorotate dehydrogenase, conserved site ALE3EI_0070 IPR013785 Aldolase-type TIM barrel ALE3EI_0070 IPR005720 Dihydroorotate dehydrogenase domain ALE3EI_0071 IPR010161 Peptidase M20B, tripeptide aminopeptidase ALE3EI_0071 IPR011650 Peptidase M20, dimerisation domain ALE3EI_0071 IPR002933 Peptidase M20 ALE3EI_0071 IPR036264 Bacterial exopeptidase dimerisation domain ALE3EI_0071 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site ALE3EI_0072 IPR003849 Preprotein translocase YajC ALE3EI_0074 IPR035926 NusB-like superfamily ALE3EI_0074 IPR006027 NusB/RsmB/TIM44 ALE3EI_0074 IPR011605 NusB antitermination factor ALE3EI_0075 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0075 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain ALE3EI_0075 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal ALE3EI_0075 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal ALE3EI_0075 IPR033524 Leu/Phe/Val dehydrogenases active site ALE3EI_0075 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase ALE3EI_0076 IPR003593 AAA+ ATPase domain ALE3EI_0076 IPR011527 ABC transporter type 1, transmembrane domain ALE3EI_0076 IPR039421 Type I protein exporter ALE3EI_0076 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0076 IPR017871 ABC transporter, conserved site ALE3EI_0076 IPR036640 ABC transporter type 1, transmembrane domain superfamily ALE3EI_0076 IPR003439 ABC transporter-like ALE3EI_0079 IPR011547 SLC26A/SulP transporter domain ALE3EI_0079 IPR001902 SLC26A/SulP transporter ALE3EI_0079 IPR002645 STAS domain ALE3EI_0079 IPR018045 Sulphate anion transporter, conserved site ALE3EI_0079 IPR036513 STAS domain superfamily ALE3EI_0083 IPR028362 Alginate O-acetyltransferase AlgI ALE3EI_0083 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB ALE3EI_0083 IPR004299 Membrane bound O-acyl transferase, MBOAT ALE3EI_0085 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ALE3EI_0085 IPR023480 Uncharacterised protein family UPF0312/YceI ALE3EI_0085 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ALE3EI_0086 IPR002547 tRNA-binding domain ALE3EI_0086 IPR008231 Probable chaperone CsaA ALE3EI_0086 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_0089 IPR023774 Putative metal-dependent hydrolase YfiT ALE3EI_0089 IPR034660 DinB/YfiT-like putative metalloenzymes ALE3EI_0089 IPR024775 DinB-like domain ALE3EI_0090 IPR029000 Cyclophilin-like domain superfamily ALE3EI_0090 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site ALE3EI_0090 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain ALE3EI_0091 IPR011545 DEAD/DEAH box helicase domain ALE3EI_0091 IPR001650 Helicase, C-terminal ALE3EI_0091 IPR010997 HRDC-like superfamily ALE3EI_0091 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0091 IPR018982 RQC domain ALE3EI_0091 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0091 IPR002121 HRDC domain ALE3EI_0091 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial ALE3EI_0091 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_0091 IPR004589 DNA helicase, ATP-dependent, RecQ type ALE3EI_0091 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain ALE3EI_0092 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type ALE3EI_0092 IPR000644 CBS domain ALE3EI_0092 IPR001347 Sugar isomerase (SIS) ALE3EI_0092 IPR035474 KpsF-like, SIS domain ALE3EI_0093 IPR002033 Sec-independent periplasmic protein translocase TatC ALE3EI_0095 IPR030921 LPS export ABC transporter, ATP-binding protein LptB ALE3EI_0095 IPR003593 AAA+ ATPase domain ALE3EI_0095 IPR003439 ABC transporter-like ALE3EI_0095 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0095 IPR017871 ABC transporter, conserved site ALE3EI_0095 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ALE3EI_0096 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase ALE3EI_0096 IPR000462 CDP-alcohol phosphatidyltransferase ALE3EI_0099 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase ALE3EI_0099 IPR003362 Bacterial sugar transferase ALE3EI_0100 IPR001296 Glycosyl transferase, family 1 ALE3EI_0104 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALE3EI_0104 IPR001296 Glycosyl transferase, family 1 ALE3EI_0104 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA ALE3EI_0107 IPR004299 Membrane bound O-acyl transferase, MBOAT ALE3EI_0107 IPR028362 Alginate O-acetyltransferase AlgI ALE3EI_0107 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB ALE3EI_0108 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0108 IPR003329 Acylneuraminate cytidylyltransferase ALE3EI_0109 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing ALE3EI_0109 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain ALE3EI_0109 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like ALE3EI_0110 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal ALE3EI_0110 IPR013132 N-acetylneuraminic acid synthase, N-terminal ALE3EI_0110 IPR013785 Aldolase-type TIM barrel ALE3EI_0110 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily ALE3EI_0110 IPR013974 SAF domain ALE3EI_0110 IPR020007 N-acetylneuraminate synthase ALE3EI_0111 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALE3EI_0111 IPR011875 Alpha-maltose-1-phosphate synthase ALE3EI_0111 IPR001296 Glycosyl transferase, family 1 ALE3EI_0113 IPR016040 NAD(P)-binding domain ALE3EI_0113 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0113 IPR005886 UDP-glucose 4-epimerase ALE3EI_0114 IPR001173 Glycosyltransferase 2-like ALE3EI_0114 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0116 IPR001173 Glycosyltransferase 2-like ALE3EI_0116 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0118 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0118 IPR005835 Nucleotidyl transferase domain ALE3EI_0118 IPR037538 UTP--glucose-1-phosphate uridylyltransferase, cyanobacteria ALE3EI_0119 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0119 IPR016040 NAD(P)-binding domain ALE3EI_0120 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALE3EI_0120 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL ALE3EI_0120 IPR001296 Glycosyl transferase, family 1 ALE3EI_0122 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0122 IPR001173 Glycosyltransferase 2-like ALE3EI_0127 IPR017871 ABC transporter, conserved site ALE3EI_0127 IPR003439 ABC transporter-like ALE3EI_0127 IPR003593 AAA+ ATPase domain ALE3EI_0127 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0130 IPR007569 Protein of unknown function DUF559 ALE3EI_0130 IPR011335 Restriction endonuclease type II-like ALE3EI_0131 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0131 IPR001509 NAD-dependent epimerase/dehydratase ALE3EI_0132 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily ALE3EI_0132 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase ALE3EI_0132 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal ALE3EI_0132 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ALE3EI_0132 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0132 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation ALE3EI_0132 IPR017476 UDP-glucose/GDP-mannose dehydrogenase ALE3EI_0132 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal ALE3EI_0133 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP ALE3EI_0133 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase ALE3EI_0133 IPR003362 Bacterial sugar transferase ALE3EI_0134 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0134 IPR003856 Polysaccharide chain length determinant N-terminal domain ALE3EI_0134 IPR032807 Tyrosine kinase, G-rich domain ALE3EI_0134 IPR005702 Exopolysaccharide synthesis protein ALE3EI_0134 IPR025669 AAA domain ALE3EI_0136 IPR003593 AAA+ ATPase domain ALE3EI_0136 IPR032524 ABC transporter Uup, C-terminal ALE3EI_0136 IPR032781 ABC-transporter extension domain ALE3EI_0136 IPR003439 ABC transporter-like ALE3EI_0136 IPR017871 ABC transporter, conserved site ALE3EI_0136 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0136 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily ALE3EI_0138 IPR025857 MacB-like periplasmic core domain ALE3EI_0138 IPR003593 AAA+ ATPase domain ALE3EI_0138 IPR017911 ABC transporter, macrolide export, ATP-binding domain ALE3EI_0138 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0138 IPR003838 ABC transporter permease protein domain ALE3EI_0138 IPR003439 ABC transporter-like ALE3EI_0138 IPR017871 ABC transporter, conserved site ALE3EI_0141 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type ALE3EI_0141 IPR016030 Cobalamin adenosyltransferase-like ALE3EI_0141 IPR036451 Cobalamin adenosyltransferase-like superfamily ALE3EI_0143 IPR000185 Protein translocase subunit SecA ALE3EI_0143 IPR020937 SecA conserved site ALE3EI_0143 IPR011115 SecA DEAD-like, N-terminal ALE3EI_0143 IPR014018 SecA motor DEAD ALE3EI_0143 IPR011130 SecA, preprotein cross-linking domain ALE3EI_0143 IPR011116 SecA Wing/Scaffold ALE3EI_0143 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0143 IPR036670 SecA, preprotein cross-linking domain superfamily ALE3EI_0143 IPR036266 SecA, Wing/Scaffold superfamily ALE3EI_0150 IPR013324 RNA polymerase sigma factor, region 3/4-like ALE3EI_0150 IPR013325 RNA polymerase sigma factor, region 2 ALE3EI_0150 IPR014286 RNA polymerase sigma-70 RpoE type ALE3EI_0150 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ALE3EI_0150 IPR007627 RNA polymerase sigma-70 region 2 ALE3EI_0150 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ALE3EI_0150 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0150 IPR039425 RNA polymerase sigma-70 like ALE3EI_0150 IPR014284 RNA polymerase sigma-70 like domain ALE3EI_0154 IPR013324 RNA polymerase sigma factor, region 3/4-like ALE3EI_0154 IPR014284 RNA polymerase sigma-70 like domain ALE3EI_0154 IPR007627 RNA polymerase sigma-70 region 2 ALE3EI_0154 IPR039425 RNA polymerase sigma-70 like ALE3EI_0154 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ALE3EI_0154 IPR014286 RNA polymerase sigma-70 RpoE type ALE3EI_0154 IPR013325 RNA polymerase sigma factor, region 2 ALE3EI_0154 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ALE3EI_0154 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0156 IPR036102 OsmC/Ohr superfamily ALE3EI_0156 IPR015946 K homology domain-like, alpha/beta ALE3EI_0156 IPR019953 Organic hydroperoxide resistance protein famiy ALE3EI_0156 IPR003718 OsmC/Ohr family ALE3EI_0157 IPR003593 AAA+ ATPase domain ALE3EI_0157 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0157 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB ALE3EI_0158 IPR001509 NAD-dependent epimerase/dehydratase ALE3EI_0158 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0159 IPR001173 Glycosyltransferase 2-like ALE3EI_0159 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0162 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ALE3EI_0162 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ALE3EI_0164 IPR002528 Multi antimicrobial extrusion protein ALE3EI_0168 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 ALE3EI_0168 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0168 IPR016898 Polyphosphate kinase 2 ALE3EI_0168 IPR022488 Polyphosphate kinase-2-related ALE3EI_0169 IPR003593 AAA+ ATPase domain ALE3EI_0169 IPR025944 Sigma-54 interaction domain, conserved site ALE3EI_0169 IPR009057 Homeobox-like domain superfamily ALE3EI_0169 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0169 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0169 IPR002078 RNA polymerase sigma factor 54 interaction domain ALE3EI_0169 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALE3EI_0169 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALE3EI_0169 IPR011006 CheY-like superfamily ALE3EI_0169 IPR002197 DNA binding HTH domain, Fis-type ALE3EI_0171 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 ALE3EI_0171 IPR025692 Mechanosensitive ion channel inner membrane domain 1 ALE3EI_0171 IPR023408 Mechanosensitive ion channel MscS domain superfamily ALE3EI_0171 IPR006686 Mechanosensitive ion channel MscS, conserved site ALE3EI_0171 IPR011066 Mechanosensitive ion channel MscS, C-terminal ALE3EI_0171 IPR006685 Mechanosensitive ion channel MscS ALE3EI_0171 IPR010920 LSM domain superfamily ALE3EI_0171 IPR024393 Mechanosensitive ion channel MscS, porin domain ALE3EI_0173 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0173 IPR025302 Domain of unknown function DUF4162 ALE3EI_0173 IPR017871 ABC transporter, conserved site ALE3EI_0173 IPR003439 ABC transporter-like ALE3EI_0173 IPR003593 AAA+ ATPase domain ALE3EI_0174 IPR018253 DnaJ domain, conserved site ALE3EI_0174 IPR012724 Chaperone DnaJ ALE3EI_0174 IPR002939 Chaperone DnaJ, C-terminal ALE3EI_0174 IPR001305 Heat shock protein DnaJ, cysteine-rich domain ALE3EI_0174 IPR001623 DnaJ domain ALE3EI_0174 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily ALE3EI_0174 IPR036869 Chaperone J-domain superfamily ALE3EI_0174 IPR008971 HSP40/DnaJ peptide-binding ALE3EI_0175 IPR009012 GrpE nucleotide exchange factor, head ALE3EI_0175 IPR013805 GrpE nucleotide exchange factor, coiled-coil ALE3EI_0175 IPR000740 GrpE nucleotide exchange factor ALE3EI_0177 IPR010099 Epimerase family protein SDR39U1 ALE3EI_0177 IPR001509 NAD-dependent epimerase/dehydratase ALE3EI_0177 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0177 IPR013549 Domain of unknown function DUF1731 ALE3EI_0178 IPR006076 FAD dependent oxidoreductase ALE3EI_0178 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC ALE3EI_0178 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal ALE3EI_0178 IPR008471 MnmC-like methyltransferase ALE3EI_0178 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_0180 IPR033939 Branched-chain aminotransferase ALE3EI_0180 IPR005786 Branched-chain amino acid aminotransferase II ALE3EI_0180 IPR036038 Aminotransferase-like, PLP-dependent enzymes ALE3EI_0180 IPR018300 Aminotransferase, class IV, conserved site ALE3EI_0180 IPR001544 Aminotransferase class IV ALE3EI_0184 IPR003018 GAF domain ALE3EI_0184 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0184 IPR005467 Histidine kinase domain ALE3EI_0184 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ALE3EI_0184 IPR029016 GAF-like domain superfamily ALE3EI_0184 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0185 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_0185 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_0185 IPR011006 CheY-like superfamily ALE3EI_0185 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0189 IPR003691 Putative fluoride ion transporter CrcB ALE3EI_0191 IPR018060 DNA binding HTH domain, AraC-type ALE3EI_0191 IPR009057 Homeobox-like domain superfamily ALE3EI_0191 IPR002818 DJ-1/PfpI ALE3EI_0191 IPR029062 Class I glutamine amidotransferase-like ALE3EI_0191 IPR018062 HTH domain AraC-type, conserved site ALE3EI_0193 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_0193 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0193 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALE3EI_0193 IPR019888 Transcription regulator AsnC-type ALE3EI_0193 IPR000485 AsnC-type HTH domain ALE3EI_0193 IPR011008 Dimeric alpha-beta barrel ALE3EI_0195 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic ALE3EI_0195 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0195 IPR006159 Methylmalonyl-CoA mutase, C-terminal ALE3EI_0195 IPR033669 Fused isobutyryl-CoA mutase ALE3EI_0195 IPR036724 Cobalamin-binding domain superfamily ALE3EI_0195 IPR006158 Cobalamin (vitamin B12)-binding domain ALE3EI_0195 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic ALE3EI_0200 IPR002491 ABC transporter periplasmic binding domain ALE3EI_0201 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 ALE3EI_0201 IPR013785 Aldolase-type TIM barrel ALE3EI_0201 IPR011060 Ribulose-phosphate binding barrel ALE3EI_0201 IPR001754 Orotidine 5'-phosphate decarboxylase domain ALE3EI_0202 IPR005139 Peptide chain release factor ALE3EI_0202 IPR004373 Peptide chain release factor 1 ALE3EI_0202 IPR000352 Peptide chain release factor class I ALE3EI_0203 IPR010918 PurM-like, C-terminal domain ALE3EI_0203 IPR036676 PurM-like, C-terminal domain superfamily ALE3EI_0203 IPR016188 PurM-like, N-terminal domain ALE3EI_0203 IPR036921 PurM-like, N-terminal domain superfamily ALE3EI_0203 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase ALE3EI_0205 IPR005534 Curli production assembly/transport component CsgG ALE3EI_0206 IPR018893 Type VIII secretion system, CsgF ALE3EI_0210 IPR008146 Glutamine synthetase, catalytic domain ALE3EI_0210 IPR022147 Glutamine synthetase type III N-terminal ALE3EI_0210 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain ALE3EI_0210 IPR040577 Glutamine synthetase, C-terminal ALE3EI_0210 IPR027303 Glutamine synthetase, glycine-rich site ALE3EI_0211 IPR004837 Sodium/calcium exchanger membrane region ALE3EI_0211 IPR004481 Sodium/potassium/calcium exchanger ALE3EI_0214 IPR000836 Phosphoribosyltransferase domain ALE3EI_0214 IPR029057 Phosphoribosyltransferase-like ALE3EI_0214 IPR005764 Adenine phosphoribosyl transferase ALE3EI_0219 IPR004498 Ribosomal protein L11 methyltransferase ALE3EI_0219 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0220 IPR013785 Aldolase-type TIM barrel ALE3EI_0220 IPR035990 Triosephosphate isomerase superfamily ALE3EI_0220 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic ALE3EI_0220 IPR020861 Triosephosphate isomerase, active site ALE3EI_0220 IPR000652 Triosephosphate isomerase ALE3EI_0221 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ALE3EI_0221 IPR035906 MetI-like superfamily ALE3EI_0224 IPR006390 Dihydropteroate synthase ALE3EI_0224 IPR000489 Pterin-binding domain ALE3EI_0224 IPR011005 Dihydropteroate synthase-like ALE3EI_0225 IPR034701 Diadenylate cyclase CdaA ALE3EI_0225 IPR014046 Diadenylate cyclase ALE3EI_0225 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ALE3EI_0225 IPR003390 DNA integrity scanning protein, DisA, N-terminal ALE3EI_0227 IPR011527 ABC transporter type 1, transmembrane domain ALE3EI_0227 IPR036640 ABC transporter type 1, transmembrane domain superfamily ALE3EI_0227 IPR003593 AAA+ ATPase domain ALE3EI_0227 IPR003439 ABC transporter-like ALE3EI_0227 IPR039421 Type I protein exporter ALE3EI_0227 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0228 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain ALE3EI_0228 IPR020095 Pseudouridine synthase I, TruA, C-terminal ALE3EI_0228 IPR020103 Pseudouridine synthase, catalytic domain superfamily ALE3EI_0228 IPR001406 Pseudouridine synthase I, TruA ALE3EI_0231 IPR041703 Transcription termination factor Rho, ATP binding domain ALE3EI_0231 IPR003593 AAA+ ATPase domain ALE3EI_0231 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0231 IPR004665 Transcription termination factor Rho ALE3EI_0231 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ALE3EI_0231 IPR011113 Rho termination factor, RNA-binding domain ALE3EI_0231 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_0236 IPR000086 NUDIX hydrolase domain ALE3EI_0236 IPR020084 NUDIX hydrolase, conserved site ALE3EI_0236 IPR015797 NUDIX hydrolase-like domain superfamily ALE3EI_0236 IPR020476 NUDIX hydrolase ALE3EI_0237 IPR004467 Orotate phosphoribosyl transferase domain ALE3EI_0237 IPR023031 Orotate phosphoribosyltransferase ALE3EI_0237 IPR029057 Phosphoribosyltransferase-like ALE3EI_0237 IPR000836 Phosphoribosyltransferase domain ALE3EI_0239 IPR004409 Biotin operon repressor, helix-turn-helix domain ALE3EI_0239 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_0239 IPR003142 Biotin protein ligase, C-terminal ALE3EI_0239 IPR030855 Bifunctional ligase/repressor BirA ALE3EI_0239 IPR004408 Biotin--acetyl-CoA-carboxylase ligase ALE3EI_0239 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0239 IPR013196 Helix-turn-helix, type 11 ALE3EI_0239 IPR008988 Transcriptional repressor, C-terminal ALE3EI_0239 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain ALE3EI_0240 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ALE3EI_0241 IPR003593 AAA+ ATPase domain ALE3EI_0241 IPR041569 AAA ATPase, AAA+ lid domain ALE3EI_0241 IPR003959 ATPase, AAA-type, core ALE3EI_0241 IPR003960 ATPase, AAA-type, conserved site ALE3EI_0241 IPR018247 EF-Hand 1, calcium-binding site ALE3EI_0241 IPR005936 Peptidase, FtsH ALE3EI_0241 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0241 IPR000642 Peptidase M41 ALE3EI_0241 IPR037219 Peptidase M41-like ALE3EI_0243 IPR000374 Phosphatidate cytidylyltransferase ALE3EI_0244 IPR003817 Phosphatidylserine decarboxylase-related ALE3EI_0244 IPR033175 Phosphatidylserine decarboxylase, archaeal-type ALE3EI_0247 IPR002300 Aminoacyl-tRNA synthetase, class Ia ALE3EI_0247 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily ALE3EI_0247 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ALE3EI_0247 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm ALE3EI_0247 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain ALE3EI_0247 IPR002303 Valine-tRNA ligase ALE3EI_0247 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ALE3EI_0247 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm ALE3EI_0247 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_0247 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding ALE3EI_0247 IPR033705 Valyl tRNA synthetase, anticodon-binding domain ALE3EI_0249 IPR001478 PDZ domain ALE3EI_0249 IPR041489 PDZ domain 6 ALE3EI_0249 IPR036034 PDZ superfamily ALE3EI_0249 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase ALE3EI_0249 IPR008915 Peptidase M50 ALE3EI_0250 IPR004839 Aminotransferase, class I/classII ALE3EI_0250 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site ALE3EI_0250 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_0250 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_0250 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_0251 IPR036318 FAD-binding, type PCMH-like superfamily ALE3EI_0251 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase ALE3EI_0251 IPR016169 FAD-binding, type PCMH, subdomain 2 ALE3EI_0251 IPR016167 FAD-binding, type PCMH, subdomain 1 ALE3EI_0251 IPR016166 FAD-binding domain, PCMH-type ALE3EI_0251 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal ALE3EI_0251 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily ALE3EI_0251 IPR006094 FAD linked oxidase, N-terminal ALE3EI_0252 IPR000782 FAS1 domain ALE3EI_0252 IPR036378 FAS1 domain superfamily ALE3EI_0254 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA ALE3EI_0254 IPR001173 Glycosyltransferase 2-like ALE3EI_0254 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0257 IPR006638 Elp3/MiaB/NifB ALE3EI_0257 IPR013785 Aldolase-type TIM barrel ALE3EI_0257 IPR007197 Radical SAM ALE3EI_0257 IPR003698 Lipoyl synthase ALE3EI_0258 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain ALE3EI_0258 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family ALE3EI_0258 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I ALE3EI_0258 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0258 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain ALE3EI_0259 IPR033414 Periplasmic sensor domain ALE3EI_0259 IPR036641 HPT domain superfamily ALE3EI_0259 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0259 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain ALE3EI_0259 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0259 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_0259 IPR005467 Histidine kinase domain ALE3EI_0259 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0259 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_0259 IPR003660 HAMP domain ALE3EI_0259 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_0259 IPR011006 CheY-like superfamily ALE3EI_0260 IPR003758 Tetraacyldisaccharide 4'-kinase ALE3EI_0260 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0261 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria ALE3EI_0261 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily ALE3EI_0261 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ALE3EI_0261 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ALE3EI_0263 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily ALE3EI_0263 IPR002569 Peptide methionine sulphoxide reductase MsrA ALE3EI_0264 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0264 IPR010233 Ubiquinone biosynthesis O-methyltransferase ALE3EI_0270 IPR000192 Aminotransferase class V domain ALE3EI_0270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_0270 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_0270 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_0270 IPR010111 Kynureninase ALE3EI_0271 IPR027545 Kynurenine 3-monooxygenase ALE3EI_0271 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_0271 IPR002938 FAD-binding domain ALE3EI_0272 IPR006175 YjgF/YER057c/UK114 family ALE3EI_0272 IPR035959 RutC-like superfamily ALE3EI_0273 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase ALE3EI_0273 IPR016162 Aldehyde dehydrogenase, N-terminal ALE3EI_0273 IPR016161 Aldehyde/histidinol dehydrogenase ALE3EI_0273 IPR016163 Aldehyde dehydrogenase, C-terminal ALE3EI_0273 IPR016160 Aldehyde dehydrogenase, cysteine active site ALE3EI_0273 IPR015590 Aldehyde dehydrogenase domain ALE3EI_0273 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ALE3EI_0274 IPR002347 Short-chain dehydrogenase/reductase SDR ALE3EI_0274 IPR020904 Short-chain dehydrogenase/reductase, conserved site ALE3EI_0274 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ALE3EI_0274 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0276 IPR002935 Class I-like SAM-dependent O-methyltransferase ALE3EI_0276 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0277 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ALE3EI_0277 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ALE3EI_0278 IPR006312 Sec-independent protein translocase protein TatA/E ALE3EI_0278 IPR003369 Sec-independent protein translocase protein TatA/B/E ALE3EI_0283 IPR023172 Peptidase S51, dipeptidase E ALE3EI_0283 IPR029062 Class I glutamine amidotransferase-like ALE3EI_0283 IPR005320 Peptidase S51 ALE3EI_0284 IPR003709 Peptidase M15B ALE3EI_0284 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily ALE3EI_0285 IPR001915 Peptidase M48 ALE3EI_0286 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily ALE3EI_0286 IPR006124 Metalloenzyme ALE3EI_0286 IPR011258 BPG-independent PGAM, N-terminal ALE3EI_0286 IPR017850 Alkaline-phosphatase-like, core domain superfamily ALE3EI_0286 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent ALE3EI_0288 IPR000994 Peptidase M24 ALE3EI_0288 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 ALE3EI_0288 IPR001714 Peptidase M24, methionine aminopeptidase ALE3EI_0288 IPR036005 Creatinase/aminopeptidase-like ALE3EI_0289 IPR023576 UbiE/COQ5 methyltransferase, conserved site ALE3EI_0289 IPR004033 UbiE/COQ5 methyltransferase ALE3EI_0289 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0290 IPR024932 Flavin transferase ApbE ALE3EI_0290 IPR042159 Flavin-trafficking protein ApbE ALE3EI_0290 IPR003374 ApbE-like superfamily ALE3EI_0293 IPR001433 Oxidoreductase FAD/NAD(P)-binding ALE3EI_0293 IPR017927 FAD-binding domain, ferredoxin reductase-type ALE3EI_0293 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ALE3EI_0293 IPR012675 Beta-grasp domain superfamily ALE3EI_0293 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ALE3EI_0293 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ALE3EI_0293 IPR036010 2Fe-2S ferredoxin-like superfamily ALE3EI_0293 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F ALE3EI_0293 IPR017938 Riboflavin synthase-like beta-barrel ALE3EI_0294 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E ALE3EI_0294 IPR003667 NqrDE/RnfAE ALE3EI_0295 IPR003667 NqrDE/RnfAE ALE3EI_0295 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D ALE3EI_0296 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C ALE3EI_0296 IPR007329 FMN-binding ALE3EI_0297 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD ALE3EI_0297 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B ALE3EI_0298 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain ALE3EI_0298 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A ALE3EI_0301 IPR007474 ApaG domain ALE3EI_0301 IPR023065 Uncharacterised protein family ApaG ALE3EI_0301 IPR036767 ApaG domain superfamily ALE3EI_0304 IPR018062 HTH domain AraC-type, conserved site ALE3EI_0304 IPR013783 Immunoglobulin-like fold ALE3EI_0304 IPR018060 DNA binding HTH domain, AraC-type ALE3EI_0304 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ALE3EI_0304 IPR009057 Homeobox-like domain superfamily ALE3EI_0304 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_0304 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0304 IPR015943 WD40/YVTN repeat-like-containing domain superfamily ALE3EI_0304 IPR005467 Histidine kinase domain ALE3EI_0304 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_0304 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_0304 IPR011110 Two component regulator propeller ALE3EI_0304 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0304 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0304 IPR011006 CheY-like superfamily ALE3EI_0304 IPR011123 Two component regulator three Y ALE3EI_0306 IPR016162 Aldehyde dehydrogenase, N-terminal ALE3EI_0306 IPR016161 Aldehyde/histidinol dehydrogenase ALE3EI_0306 IPR016163 Aldehyde dehydrogenase, C-terminal ALE3EI_0306 IPR016160 Aldehyde dehydrogenase, cysteine active site ALE3EI_0306 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ALE3EI_0306 IPR015590 Aldehyde dehydrogenase domain ALE3EI_0307 IPR004385 Nucleoside diphosphate pyrophosphatase ALE3EI_0307 IPR015797 NUDIX hydrolase-like domain superfamily ALE3EI_0307 IPR000086 NUDIX hydrolase domain ALE3EI_0308 IPR003682 rRNA small subunit methyltransferase G ALE3EI_0308 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0309 IPR005804 Fatty acid desaturase domain ALE3EI_0312 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_0312 IPR004839 Aminotransferase, class I/classII ALE3EI_0312 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_0312 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_0314 IPR011054 Rudiment single hybrid motif ALE3EI_0314 IPR011761 ATP-grasp fold ALE3EI_0314 IPR016185 Pre-ATP-grasp domain superfamily ALE3EI_0314 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase ALE3EI_0314 IPR013815 ATP-grasp fold, subdomain 1 ALE3EI_0314 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ALE3EI_0315 IPR003445 Cation transporter ALE3EI_0315 IPR004772 TrkH potassium transport family ALE3EI_0316 IPR006036 Potassium uptake protein TrkA ALE3EI_0316 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0316 IPR006037 Regulator of K+ conductance, C-terminal ALE3EI_0316 IPR003148 Regulator of K+ conductance, N-terminal ALE3EI_0316 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ALE3EI_0317 IPR023576 UbiE/COQ5 methyltransferase, conserved site ALE3EI_0317 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0317 IPR004033 UbiE/COQ5 methyltransferase ALE3EI_0321 IPR013785 Aldolase-type TIM barrel ALE3EI_0321 IPR000771 Fructose-bisphosphate aldolase, class-II ALE3EI_0321 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype ALE3EI_0322 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal ALE3EI_0322 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_0322 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit ALE3EI_0322 IPR034733 Acetyl-CoA carboxylase ALE3EI_0324 IPR005290 Ribosomal protein S15, bacterial-type ALE3EI_0324 IPR000589 Ribosomal protein S15 ALE3EI_0324 IPR009068 S15/NS1, RNA-binding ALE3EI_0325 IPR001247 Exoribonuclease, phosphorolytic domain 1 ALE3EI_0325 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain ALE3EI_0325 IPR004088 K Homology domain, type 1 ALE3EI_0325 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_0325 IPR036612 K Homology domain, type 1 superfamily ALE3EI_0325 IPR036345 Exoribonuclease, PH domain 2 superfamily ALE3EI_0325 IPR004087 K Homology domain ALE3EI_0325 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_0325 IPR027408 PNPase/RNase PH domain superfamily ALE3EI_0325 IPR003029 S1 domain ALE3EI_0325 IPR012162 Polyribonucleotide nucleotidyltransferase ALE3EI_0325 IPR015847 Exoribonuclease, phosphorolytic domain 2 ALE3EI_0325 IPR022967 RNA-binding domain, S1 ALE3EI_0330 IPR028630 RNA polymerase sigma factor RpoD ALE3EI_0330 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0330 IPR012760 RNA polymerase sigma factor RpoD, C-terminal ALE3EI_0330 IPR007627 RNA polymerase sigma-70 region 2 ALE3EI_0330 IPR013325 RNA polymerase sigma factor, region 2 ALE3EI_0330 IPR042189 Sigma-70 factor, region 1.1 superfamily ALE3EI_0330 IPR007127 RNA polymerase sigma factor 70, region 1.1 ALE3EI_0330 IPR007630 RNA polymerase sigma-70 region 4 ALE3EI_0330 IPR007624 RNA polymerase sigma-70 region 3 ALE3EI_0330 IPR009042 RNA polymerase sigma-70 region 1.2 ALE3EI_0330 IPR000943 RNA polymerase sigma-70 ALE3EI_0330 IPR014284 RNA polymerase sigma-70 like domain ALE3EI_0330 IPR013324 RNA polymerase sigma factor, region 3/4-like ALE3EI_0332 IPR011060 Ribulose-phosphate binding barrel ALE3EI_0332 IPR026019 Ribulose-phosphate 3-epimerase ALE3EI_0332 IPR000056 Ribulose-phosphate 3-epimerase-like ALE3EI_0332 IPR013785 Aldolase-type TIM barrel ALE3EI_0341 IPR019004 Uncharacterised protein YqeY/Aim41 ALE3EI_0341 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like ALE3EI_0341 IPR042184 YqeY/Aim41, N-terminal domain ALE3EI_0341 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 ALE3EI_0342 IPR003008 Tubulin/FtsZ, GTPase domain ALE3EI_0342 IPR000158 Cell division protein FtsZ ALE3EI_0342 IPR020805 Cell division protein FtsZ, conserved site ALE3EI_0342 IPR024757 Cell division protein FtsZ, C-terminal ALE3EI_0342 IPR036525 Tubulin/FtsZ, GTPase domain superfamily ALE3EI_0342 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain ALE3EI_0342 IPR008280 Tubulin/FtsZ, C-terminal ALE3EI_0343 IPR003494 SHS2 domain inserted in FtsA ALE3EI_0343 IPR020823 Cell division protein FtsA ALE3EI_0345 IPR004101 Mur ligase, C-terminal ALE3EI_0345 IPR000713 Mur ligase, N-terminal catalytic domain ALE3EI_0345 IPR036565 Mur-like, catalytic domain superfamily ALE3EI_0345 IPR013221 Mur ligase, central ALE3EI_0345 IPR036615 Mur ligase, C-terminal domain superfamily ALE3EI_0345 IPR005758 UDP-N-acetylmuramate--L-alanine ligase ALE3EI_0346 IPR006009 N-acetylglucosaminyltransferase, MurG ALE3EI_0346 IPR007235 Glycosyl transferase, family 28, C-terminal ALE3EI_0346 IPR004276 Glycosyltransferase family 28, N-terminal domain ALE3EI_0347 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA ALE3EI_0347 IPR013437 Probable peptidoglycan glycosyltransferase FtsW ALE3EI_0347 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site ALE3EI_0348 IPR036565 Mur-like, catalytic domain superfamily ALE3EI_0348 IPR004101 Mur ligase, C-terminal ALE3EI_0348 IPR036615 Mur ligase, C-terminal domain superfamily ALE3EI_0348 IPR013221 Mur ligase, central ALE3EI_0348 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase ALE3EI_0349 IPR000715 Glycosyl transferase, family 4 ALE3EI_0349 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase ALE3EI_0349 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site ALE3EI_0350 IPR036615 Mur ligase, C-terminal domain superfamily ALE3EI_0350 IPR004101 Mur ligase, C-terminal ALE3EI_0350 IPR036565 Mur-like, catalytic domain superfamily ALE3EI_0350 IPR013221 Mur ligase, central ALE3EI_0350 IPR000713 Mur ligase, N-terminal catalytic domain ALE3EI_0350 IPR035911 MurE/MurF, N-terminal ALE3EI_0350 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase ALE3EI_0351 IPR036138 Penicillin-binding protein, dimerisation domain superfamily ALE3EI_0351 IPR005311 Penicillin-binding protein, dimerisation domain ALE3EI_0351 IPR012338 Beta-lactamase/transpeptidase-like ALE3EI_0351 IPR001460 Penicillin-binding protein, transpeptidase ALE3EI_0351 IPR011927 Stage V sporulation protein D ALE3EI_0351 IPR005543 PASTA domain ALE3EI_0353 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0353 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily ALE3EI_0353 IPR002903 Ribosomal RNA small subunit methyltransferase H ALE3EI_0354 IPR035642 MraZ, N-terminal ALE3EI_0354 IPR037914 SpoVT-AbrB domain superfamily ALE3EI_0354 IPR007159 SpoVT-AbrB domain ALE3EI_0354 IPR038619 MraZ superfamily ALE3EI_0354 IPR035644 MraZ, C-terminal ALE3EI_0354 IPR020603 MraZ domain ALE3EI_0354 IPR003444 Transcriptional regulator MraZ ALE3EI_0356 IPR030393 EngB-type guanine nucleotide-binding (G) domain ALE3EI_0356 IPR006073 GTP binding domain ALE3EI_0356 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC ALE3EI_0356 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0359 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_0359 IPR022926 NH(3)-dependent NAD(+) synthetase ALE3EI_0359 IPR003694 NAD(+) synthetase ALE3EI_0359 IPR022310 NAD/GMP synthase ALE3EI_0360 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0360 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_0360 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_0360 IPR011006 CheY-like superfamily ALE3EI_0361 IPR006295 DNA primase, DnaG ALE3EI_0361 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily ALE3EI_0361 IPR036977 DNA Primase, CHC2-type zinc finger ALE3EI_0361 IPR006171 TOPRIM domain ALE3EI_0361 IPR034151 Bacterial DnaG primase, TOPRIM domain ALE3EI_0361 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ALE3EI_0361 IPR013264 DNA primase, catalytic core, N-terminal ALE3EI_0361 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily ALE3EI_0361 IPR019475 DNA primase, DnaB-helicase binding domain ALE3EI_0361 IPR002694 Zinc finger, CHC2-type ALE3EI_0361 IPR030846 DNA primase DnaG, bacteria ALE3EI_0366 IPR008949 Isoprenoid synthase domain superfamily ALE3EI_0366 IPR000092 Polyprenyl synthetase ALE3EI_0366 IPR033749 Polyprenyl synthetase, conserved site ALE3EI_0371 IPR013785 Aldolase-type TIM barrel ALE3EI_0371 IPR007197 Radical SAM ALE3EI_0371 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr ALE3EI_0371 IPR027492 Dual-specificity RNA methyltransferase RlmN ALE3EI_0371 IPR040072 Methyltransferase (Class A) ALE3EI_0372 IPR002884 P domain ALE3EI_0372 IPR008979 Galactose-binding-like domain superfamily ALE3EI_0372 IPR009003 Peptidase S1, PA clan ALE3EI_0372 IPR013783 Immunoglobulin-like fold ALE3EI_0372 IPR017323 Lysyl endopeptidase ALE3EI_0372 IPR022409 PKD/Chitinase domain ALE3EI_0372 IPR035986 PKD domain superfamily ALE3EI_0372 IPR000601 PKD domain ALE3EI_0373 IPR042118 QueA, domain 1 ALE3EI_0373 IPR042119 QueA, domain 2 ALE3EI_0373 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily ALE3EI_0373 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA ALE3EI_0374 IPR001986 Enolpyruvate transferase domain ALE3EI_0374 IPR036968 Enolpyruvate transferase domain superfamily ALE3EI_0374 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase ALE3EI_0374 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site ALE3EI_0374 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta ALE3EI_0379 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily ALE3EI_0379 IPR003732 D-aminoacyl-tRNA deacylase DTD ALE3EI_0380 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal ALE3EI_0380 IPR010914 RsgA GTPase domain ALE3EI_0380 IPR004881 Ribosome biogenesis GTPase RsgA ALE3EI_0380 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0380 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_0380 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain ALE3EI_0381 IPR006218 DAHP synthetase I/KDSA ALE3EI_0381 IPR013785 Aldolase-type TIM barrel ALE3EI_0381 IPR041071 DAHP synthase ferredoxin-like domain ALE3EI_0381 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 ALE3EI_0382 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0382 IPR017871 ABC transporter, conserved site ALE3EI_0382 IPR003439 ABC transporter-like ALE3EI_0382 IPR003593 AAA+ ATPase domain ALE3EI_0387 IPR001926 Pyridoxal-phosphate dependent enzyme ALE3EI_0387 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALE3EI_0388 IPR030489 Transcription regulator Rrf2-type, conserved site ALE3EI_0388 IPR000944 Transcription regulator Rrf2-type ALE3EI_0388 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_0388 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0389 IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase ALE3EI_0389 IPR003171 Methylenetetrahydrofolate reductase ALE3EI_0389 IPR029041 FAD-linked oxidoreductase-like ALE3EI_0389 IPR004620 5,10-methylenetetrahydrofolate reductase ALE3EI_0390 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain ALE3EI_0390 IPR033706 Methionine synthase, B12-binding domain ALE3EI_0390 IPR036589 Homocysteine-binding domain superfamily ALE3EI_0390 IPR003726 Homocysteine-binding domain ALE3EI_0390 IPR011005 Dihydropteroate synthase-like ALE3EI_0390 IPR006158 Cobalamin (vitamin B12)-binding domain ALE3EI_0390 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily ALE3EI_0390 IPR004223 Vitamin B12-dependent methionine synthase, activation domain ALE3EI_0390 IPR000489 Pterin-binding domain ALE3EI_0390 IPR036594 Methionine synthase domain ALE3EI_0390 IPR011822 Cobalamin-dependent methionine synthase ALE3EI_0390 IPR036724 Cobalamin-binding domain superfamily ALE3EI_0391 IPR000489 Pterin-binding domain ALE3EI_0391 IPR033706 Methionine synthase, B12-binding domain ALE3EI_0391 IPR011822 Cobalamin-dependent methionine synthase ALE3EI_0391 IPR036594 Methionine synthase domain ALE3EI_0391 IPR006158 Cobalamin (vitamin B12)-binding domain ALE3EI_0391 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily ALE3EI_0391 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain ALE3EI_0391 IPR036724 Cobalamin-binding domain superfamily ALE3EI_0391 IPR011005 Dihydropteroate synthase-like ALE3EI_0391 IPR003726 Homocysteine-binding domain ALE3EI_0391 IPR036589 Homocysteine-binding domain superfamily ALE3EI_0391 IPR004223 Vitamin B12-dependent methionine synthase, activation domain ALE3EI_0392 IPR036102 OsmC/Ohr superfamily ALE3EI_0392 IPR015946 K homology domain-like, alpha/beta ALE3EI_0392 IPR003718 OsmC/Ohr family ALE3EI_0393 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0393 IPR018042 Aspartate kinase, conserved site ALE3EI_0393 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I ALE3EI_0393 IPR001342 Homoserine dehydrogenase, catalytic ALE3EI_0393 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding ALE3EI_0393 IPR019811 Homoserine dehydrogenase, conserved site ALE3EI_0393 IPR001341 Aspartate kinase ALE3EI_0393 IPR001048 Aspartate/glutamate/uridylate kinase ALE3EI_0393 IPR002912 ACT domain ALE3EI_0393 IPR027795 CASTOR, ACT domain ALE3EI_0393 IPR036393 Acetylglutamate kinase-like superfamily ALE3EI_0394 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_0394 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_0394 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_0394 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme ALE3EI_0396 IPR022630 S-adenosylmethionine synthetase, C-terminal ALE3EI_0396 IPR022628 S-adenosylmethionine synthetase, N-terminal ALE3EI_0396 IPR002133 S-adenosylmethionine synthetase ALE3EI_0396 IPR022631 S-adenosylmethionine synthetase, conserved site ALE3EI_0396 IPR022629 S-adenosylmethionine synthetase, central domain ALE3EI_0396 IPR022636 S-adenosylmethionine synthetase superfamily ALE3EI_0398 IPR011006 CheY-like superfamily ALE3EI_0398 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_0398 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0398 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_0408 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain ALE3EI_0408 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal ALE3EI_0408 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria ALE3EI_0408 IPR003156 DHHA1 domain ALE3EI_0408 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily ALE3EI_0408 IPR009000 Translation protein, beta-barrel domain superfamily ALE3EI_0408 IPR002318 Alanine-tRNA ligase, class IIc ALE3EI_0408 IPR012947 Threonyl/alanyl tRNA synthetase, SAD ALE3EI_0408 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily ALE3EI_0409 IPR003646 SH3-like domain, bacterial-type ALE3EI_0409 IPR016047 Peptidase M23 ALE3EI_0409 IPR011055 Duplicated hybrid motif ALE3EI_0415 IPR005225 Small GTP-binding protein domain ALE3EI_0415 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0415 IPR015946 K homology domain-like, alpha/beta ALE3EI_0415 IPR032859 GTPase Der, C-terminal KH-domain-like ALE3EI_0415 IPR006073 GTP binding domain ALE3EI_0415 IPR016484 GTP-binding protein EngA ALE3EI_0415 IPR031166 EngA-type guanine nucleotide-binding (G) domain ALE3EI_0416 IPR015946 K homology domain-like, alpha/beta ALE3EI_0416 IPR006073 GTP binding domain ALE3EI_0416 IPR005662 GTP-binding protein Era ALE3EI_0416 IPR005225 Small GTP-binding protein domain ALE3EI_0416 IPR030388 Era-type guanine nucleotide-binding (G) domain ALE3EI_0416 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0416 IPR004044 K Homology domain, type 2 ALE3EI_0416 IPR009019 K homology domain superfamily, prokaryotic type ALE3EI_0420 IPR038770 Sodium/solute symporter superfamily ALE3EI_0420 IPR018422 Cation/H+ exchanger, CPA1 family ALE3EI_0420 IPR006153 Cation/H+ exchanger ALE3EI_0424 IPR001279 Metallo-beta-lactamase ALE3EI_0424 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ALE3EI_0425 IPR002781 Transmembrane protein TauE-like ALE3EI_0428 IPR002925 Dienelactone hydrolase ALE3EI_0428 IPR029058 Alpha/Beta hydrolase fold ALE3EI_0429 IPR011006 CheY-like superfamily ALE3EI_0429 IPR039420 Transcriptional regulatory protein WalR-like ALE3EI_0429 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0429 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0429 IPR001867 OmpR/PhoB-type DNA-binding domain ALE3EI_0430 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_0430 IPR031967 PhoR, single Cache-like domain ALE3EI_0430 IPR013767 PAS fold ALE3EI_0430 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0430 IPR005467 Histidine kinase domain ALE3EI_0430 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_0430 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_0430 IPR000014 PAS domain ALE3EI_0430 IPR035965 PAS domain superfamily ALE3EI_0430 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0434 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ALE3EI_0434 IPR017202 Sensor histidine kinase LiaS/VraS ALE3EI_0434 IPR005467 Histidine kinase domain ALE3EI_0434 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0434 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0434 IPR003660 HAMP domain ALE3EI_0443 IPR004546 Restriction endonuclease, type I, HsdM ALE3EI_0443 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0443 IPR003356 DNA methylase, adenine-specific ALE3EI_0443 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ALE3EI_0443 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain ALE3EI_0443 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily ALE3EI_0447 IPR022625 Type-1 restriction enzyme R protein, C-terminal ALE3EI_0447 IPR040980 SWI2/SNF2 ATPase ALE3EI_0447 IPR004473 Restriction endonuclease, type I, HsdR ALE3EI_0447 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal ALE3EI_0447 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0447 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_0448 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0448 IPR021961 Protein of unknown function DUF3578 ALE3EI_0448 IPR003593 AAA+ ATPase domain ALE3EI_0448 IPR011704 ATPase, dynein-related, AAA domain ALE3EI_0454 IPR006119 Resolvase, N-terminal catalytic domain ALE3EI_0454 IPR006118 Recombinase, conserved site ALE3EI_0454 IPR006120 Resolvase, HTH domain ALE3EI_0454 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily ALE3EI_0458 IPR021810 Protein of unknown function DUF3387 ALE3EI_0458 IPR004473 Restriction endonuclease, type I, HsdR ALE3EI_0458 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0458 IPR040980 SWI2/SNF2 ATPase ALE3EI_0458 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_0458 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal ALE3EI_0462 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0462 IPR004546 Restriction endonuclease, type I, HsdM ALE3EI_0462 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ALE3EI_0462 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain ALE3EI_0462 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily ALE3EI_0462 IPR003356 DNA methylase, adenine-specific ALE3EI_0470 IPR001036 Acriflavin resistance protein ALE3EI_0470 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALE3EI_0472 IPR017871 ABC transporter, conserved site ALE3EI_0472 IPR032524 ABC transporter Uup, C-terminal ALE3EI_0472 IPR032781 ABC-transporter extension domain ALE3EI_0472 IPR003439 ABC transporter-like ALE3EI_0472 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0472 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily ALE3EI_0472 IPR003593 AAA+ ATPase domain ALE3EI_0474 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal ALE3EI_0474 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC ALE3EI_0474 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_0474 IPR006076 FAD dependent oxidoreductase ALE3EI_0474 IPR008471 MnmC-like methyltransferase ALE3EI_0478 IPR042095 Sulfatase-modifying factor enzyme superfamily ALE3EI_0478 IPR005532 Sulfatase-modifying factor enzyme ALE3EI_0478 IPR016187 C-type lectin fold ALE3EI_0480 IPR003601 DNA topoisomerase, type IA, domain 2 ALE3EI_0480 IPR028612 DNA topoisomerase I, type IA ALE3EI_0480 IPR034149 DNA topoisomerase 1, TOPRIM domain ALE3EI_0480 IPR006171 TOPRIM domain ALE3EI_0480 IPR000380 DNA topoisomerase, type IA ALE3EI_0480 IPR025589 Topoisomerase C-terminal repeat ALE3EI_0480 IPR005733 DNA topoisomerase I, bacterial-type ALE3EI_0480 IPR003602 DNA topoisomerase, type IA, DNA-binding domain ALE3EI_0480 IPR023405 DNA topoisomerase, type IA, core domain ALE3EI_0480 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ALE3EI_0480 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ALE3EI_0480 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ALE3EI_0480 IPR013497 DNA topoisomerase, type IA, central ALE3EI_0480 IPR023406 DNA topoisomerase, type IA, active site ALE3EI_0481 IPR036649 Inorganic pyrophosphatase superfamily ALE3EI_0481 IPR008162 Inorganic pyrophosphatase ALE3EI_0483 IPR006638 Elp3/MiaB/NifB ALE3EI_0483 IPR002792 TRAM domain ALE3EI_0483 IPR023404 Radical SAM, alpha/beta horseshoe ALE3EI_0483 IPR007197 Radical SAM ALE3EI_0483 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB ALE3EI_0483 IPR038135 Methylthiotransferase, N-terminal domain superfamily ALE3EI_0483 IPR013848 Methylthiotransferase, N-terminal ALE3EI_0483 IPR020612 Methylthiotransferase, conserved site ALE3EI_0483 IPR005839 Methylthiotransferase ALE3EI_0484 IPR029995 Transcriptional activator SfnR/FlbD ALE3EI_0484 IPR025944 Sigma-54 interaction domain, conserved site ALE3EI_0484 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALE3EI_0484 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALE3EI_0484 IPR002078 RNA polymerase sigma factor 54 interaction domain ALE3EI_0484 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0484 IPR003593 AAA+ ATPase domain ALE3EI_0484 IPR009057 Homeobox-like domain superfamily ALE3EI_0488 IPR020818 GroES chaperonin family ALE3EI_0488 IPR037124 GroES chaperonin superfamily ALE3EI_0488 IPR011032 GroES-like superfamily ALE3EI_0488 IPR018369 Chaperonin GroES, conserved site ALE3EI_0489 IPR018370 Chaperonin Cpn60, conserved site ALE3EI_0489 IPR001844 Chaperonin Cpn60 ALE3EI_0489 IPR002423 Chaperonin Cpn60/TCP-1 family ALE3EI_0489 IPR027413 GroEL-like equatorial domain superfamily ALE3EI_0489 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ALE3EI_0489 IPR027409 GroEL-like apical domain superfamily ALE3EI_0493 IPR023298 P-type ATPase, transmembrane domain superfamily ALE3EI_0493 IPR036412 HAD-like superfamily ALE3EI_0493 IPR023214 HAD superfamily ALE3EI_0493 IPR027256 P-type ATPase, subfamily IB ALE3EI_0493 IPR001757 P-type ATPase ALE3EI_0493 IPR008250 P-type ATPase, A domain superfamily ALE3EI_0493 IPR018303 P-type ATPase, phosphorylation site ALE3EI_0493 IPR023299 P-type ATPase, cytoplasmic domain N ALE3EI_0494 IPR016066 Alpha-D-phosphohexomutase, conserved site ALE3EI_0494 IPR005841 Alpha-D-phosphohexomutase superfamily ALE3EI_0494 IPR006352 Phosphoglucosamine mutase, bacterial type ALE3EI_0494 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III ALE3EI_0494 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily ALE3EI_0494 IPR005843 Alpha-D-phosphohexomutase, C-terminal ALE3EI_0494 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II ALE3EI_0494 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III ALE3EI_0494 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I ALE3EI_0502 IPR017871 ABC transporter, conserved site ALE3EI_0502 IPR017911 ABC transporter, macrolide export, ATP-binding domain ALE3EI_0502 IPR003593 AAA+ ATPase domain ALE3EI_0502 IPR003439 ABC transporter-like ALE3EI_0502 IPR025857 MacB-like periplasmic core domain ALE3EI_0502 IPR003838 ABC transporter permease protein domain ALE3EI_0502 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0503 IPR024051 AICAR transformylase, duplicated domain superfamily ALE3EI_0503 IPR016193 Cytidine deaminase-like ALE3EI_0503 IPR011607 Methylglyoxal synthase-like domain ALE3EI_0503 IPR036914 Methylglyoxal synthase-like domain superfamily ALE3EI_0503 IPR002695 Bifunctional purine biosynthesis protein PurH-like ALE3EI_0504 IPR004753 Cell shape determining protein MreB ALE3EI_0507 IPR001460 Penicillin-binding protein, transpeptidase ALE3EI_0507 IPR036138 Penicillin-binding protein, dimerisation domain superfamily ALE3EI_0507 IPR017790 Penicillin-binding protein 2 ALE3EI_0507 IPR005311 Penicillin-binding protein, dimerisation domain ALE3EI_0507 IPR012338 Beta-lactamase/transpeptidase-like ALE3EI_0508 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA ALE3EI_0508 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB ALE3EI_0508 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site ALE3EI_0510 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ALE3EI_0510 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ALE3EI_0510 IPR035906 MetI-like superfamily ALE3EI_0511 IPR036034 PDZ superfamily ALE3EI_0511 IPR005151 Tail specific protease ALE3EI_0511 IPR020992 Tail specific protease, C-terminal ALE3EI_0511 IPR040573 Tail specific protease, N-terminal domain ALE3EI_0511 IPR004447 C-terminal-processing peptidase S41A ALE3EI_0511 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_0511 IPR001478 PDZ domain ALE3EI_0513 IPR030048 Survival protein SurE ALE3EI_0513 IPR002828 Survival protein SurE-like phosphatase/nucleotidase ALE3EI_0513 IPR036523 SurE-like phosphatase/nucleotidase superfamily ALE3EI_0515 IPR003835 Glycosyl transferase, family 19 ALE3EI_0516 IPR038765 Papain-like cysteine peptidase superfamily ALE3EI_0516 IPR000064 Endopeptidase, NLPC/P60 domain ALE3EI_0517 IPR025405 Domain of unknown function DUF4131 ALE3EI_0517 IPR035681 ComA-like, MBL domain ALE3EI_0517 IPR004477 ComEC/Rec2-related protein ALE3EI_0517 IPR004797 Competence protein ComEC/Rec2 ALE3EI_0517 IPR001279 Metallo-beta-lactamase ALE3EI_0517 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ALE3EI_0518 IPR005746 Thioredoxin ALE3EI_0518 IPR013766 Thioredoxin domain ALE3EI_0518 IPR017937 Thioredoxin, conserved site ALE3EI_0518 IPR036249 Thioredoxin-like superfamily ALE3EI_0519 IPR020846 Major facilitator superfamily domain ALE3EI_0519 IPR005279 Dipeptide/tripeptide permease ALE3EI_0519 IPR000109 Proton-dependent oligopeptide transporter family ALE3EI_0519 IPR036259 MFS transporter superfamily ALE3EI_0519 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site ALE3EI_0520 IPR020846 Major facilitator superfamily domain ALE3EI_0520 IPR005279 Dipeptide/tripeptide permease ALE3EI_0520 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site ALE3EI_0520 IPR000109 Proton-dependent oligopeptide transporter family ALE3EI_0520 IPR036259 MFS transporter superfamily ALE3EI_0521 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ALE3EI_0521 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily ALE3EI_0521 IPR002469 Dipeptidylpeptidase IV, N-terminal domain ALE3EI_0521 IPR029058 Alpha/Beta hydrolase fold ALE3EI_0522 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II ALE3EI_0522 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type ALE3EI_0522 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily ALE3EI_0522 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily ALE3EI_0522 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily ALE3EI_0522 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site ALE3EI_0525 IPR005170 Transporter-associated domain ALE3EI_0525 IPR016169 FAD-binding, type PCMH, subdomain 2 ALE3EI_0525 IPR036318 FAD-binding, type PCMH-like superfamily ALE3EI_0525 IPR000644 CBS domain ALE3EI_0530 IPR004619 Type III pantothenate kinase ALE3EI_0533 IPR004981 Tryptophan 2,3-dioxygenase ALE3EI_0533 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like ALE3EI_0535 IPR003779 Carboxymuconolactone decarboxylase-like ALE3EI_0535 IPR004675 Alkylhydroperoxidase AhpD core ALE3EI_0535 IPR029032 AhpD-like ALE3EI_0537 IPR022111 Rhodanase, C-terminal ALE3EI_0537 IPR020936 Uncharacterised protein family UPF0176 ALE3EI_0537 IPR040503 UPF0176, acylphosphatase-like domain ALE3EI_0537 IPR001763 Rhodanese-like domain ALE3EI_0537 IPR036873 Rhodanese-like domain superfamily ALE3EI_0539 IPR000845 Nucleoside phosphorylase domain ALE3EI_0539 IPR035994 Nucleoside phosphorylase superfamily ALE3EI_0539 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific ALE3EI_0539 IPR011268 Purine nucleoside phosphorylase ALE3EI_0539 IPR018099 Purine phosphorylase, family 2, conserved site ALE3EI_0540 IPR023576 UbiE/COQ5 methyltransferase, conserved site ALE3EI_0540 IPR004033 UbiE/COQ5 methyltransferase ALE3EI_0540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0541 IPR001204 Phosphate transporter ALE3EI_0548 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_0548 IPR041364 Rubredoxin binding domain ALE3EI_0548 IPR023753 FAD/NAD(P)-binding domain ALE3EI_0551 IPR003919 Cellulose synthase, subunit A ALE3EI_0551 IPR001173 Glycosyltransferase 2-like ALE3EI_0551 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0551 IPR009875 PilZ domain ALE3EI_0553 IPR007484 Peptidase M28 ALE3EI_0557 IPR016181 Acyl-CoA N-acyltransferase ALE3EI_0557 IPR003010 Carbon-nitrogen hydrolase ALE3EI_0557 IPR036526 Carbon-nitrogen hydrolase superfamily ALE3EI_0557 IPR001110 Uncharacterised protein family UPF0012, conserved site ALE3EI_0557 IPR000182 GNAT domain ALE3EI_0558 IPR023496 Deoxyhypusine synthase-like ALE3EI_0558 IPR002773 Deoxyhypusine synthase ALE3EI_0558 IPR036982 Deoxyhypusine synthase superfamily ALE3EI_0558 IPR029035 DHS-like NAD/FAD-binding domain superfamily ALE3EI_0559 IPR005925 Agmatinase-related ALE3EI_0559 IPR023696 Ureohydrolase domain superfamily ALE3EI_0559 IPR006035 Ureohydrolase ALE3EI_0560 IPR029066 PLP-binding barrel ALE3EI_0560 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ALE3EI_0560 IPR040634 Arginine decarboxylase, helical bundle domain ALE3EI_0560 IPR000183 Ornithine/DAP/Arg decarboxylase ALE3EI_0560 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal ALE3EI_0560 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ALE3EI_0560 IPR002985 Arginine decarboxylase ALE3EI_0560 IPR041128 Arginine decarboxylase, C-terminal helical ALE3EI_0560 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal ALE3EI_0562 IPR020103 Pseudouridine synthase, catalytic domain superfamily ALE3EI_0562 IPR006145 Pseudouridine synthase, RsuA/RluA ALE3EI_0562 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain ALE3EI_0562 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site ALE3EI_0562 IPR002942 RNA-binding S4 domain ALE3EI_0562 IPR036986 RNA-binding S4 domain superfamily ALE3EI_0562 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F ALE3EI_0574 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_0574 IPR023166 HI0933-like insert domain superfamily ALE3EI_0574 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like ALE3EI_0576 IPR038731 Glycosyltransferase RgtA/B/C/D-like ALE3EI_0577 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0577 IPR001173 Glycosyltransferase 2-like ALE3EI_0580 IPR004624 PhnA protein ALE3EI_0580 IPR013987 PhnA protein, N-terminal ALE3EI_0580 IPR013988 PhnA protein, C-terminal ALE3EI_0590 IPR007351 Uncharacterised protein YjbR ALE3EI_0590 IPR038056 YjbR-like superfamily ALE3EI_0594 IPR023404 Radical SAM, alpha/beta horseshoe ALE3EI_0594 IPR034505 Anaerobic coproporphyrinogen-III oxidase ALE3EI_0594 IPR006638 Elp3/MiaB/NifB ALE3EI_0594 IPR010723 HemN, C-terminal ALE3EI_0594 IPR007197 Radical SAM ALE3EI_0594 IPR004559 Heme chaperone HemW-like ALE3EI_0595 IPR002176 Crossover junction endodeoxyribonuclease RuvC ALE3EI_0595 IPR036397 Ribonuclease H superfamily ALE3EI_0595 IPR012337 Ribonuclease H-like superfamily ALE3EI_0595 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site ALE3EI_0597 IPR041038 TarS beta-glycosyltransferase C-terminal domain 1 ALE3EI_0597 IPR001173 Glycosyltransferase 2-like ALE3EI_0597 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0611 IPR023353 LemA-like domain superfamily ALE3EI_0611 IPR007156 LemA ALE3EI_0615 IPR001907 ATP-dependent Clp protease proteolytic subunit ALE3EI_0615 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_0615 IPR033135 ClpP, histidine active site ALE3EI_0615 IPR018215 ClpP, Ser active site ALE3EI_0615 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ALE3EI_0616 IPR005746 Thioredoxin ALE3EI_0616 IPR017937 Thioredoxin, conserved site ALE3EI_0616 IPR013766 Thioredoxin domain ALE3EI_0616 IPR036249 Thioredoxin-like superfamily ALE3EI_0617 IPR003829 Pirin, N-terminal domain ALE3EI_0617 IPR008778 Pirin, C-terminal domain ALE3EI_0617 IPR012093 Pirin ALE3EI_0617 IPR014710 RmlC-like jelly roll fold ALE3EI_0617 IPR011051 RmlC-like cupin domain superfamily ALE3EI_0620 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain ALE3EI_0620 IPR040982 DNA polymerase III alpha subunit finger domain ALE3EI_0620 IPR029460 DNA polymerase, helix-hairpin-helix motif ALE3EI_0620 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ALE3EI_0620 IPR003141 Polymerase/histidinol phosphatase, N-terminal ALE3EI_0620 IPR004013 PHP domain ALE3EI_0620 IPR004805 DNA polymerase III, alpha subunit ALE3EI_0620 IPR016195 Polymerase/histidinol phosphatase-like ALE3EI_0620 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain ALE3EI_0623 IPR000307 Ribosomal protein S16 ALE3EI_0623 IPR023803 Ribosomal protein S16 domain superfamily ALE3EI_0624 IPR009000 Translation protein, beta-barrel domain superfamily ALE3EI_0624 IPR027275 PRC-barrel domain ALE3EI_0624 IPR036976 RimM, N-terminal domain superfamily ALE3EI_0624 IPR002676 RimM, N-terminal ALE3EI_0624 IPR011961 16S rRNA processing protein RimM ALE3EI_0624 IPR011033 PRC-barrel-like superfamily ALE3EI_0625 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase ALE3EI_0625 IPR007848 Methyltransferase small domain ALE3EI_0625 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0625 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ALE3EI_0626 IPR002293 Amino acid/polyamine transporter I ALE3EI_0628 IPR006089 Acyl-CoA dehydrogenase, conserved site ALE3EI_0628 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ALE3EI_0628 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ALE3EI_0628 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ALE3EI_0628 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ALE3EI_0628 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ALE3EI_0628 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ALE3EI_0630 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ALE3EI_0630 IPR001055 Adrenodoxin ALE3EI_0630 IPR036010 2Fe-2S ferredoxin-like superfamily ALE3EI_0630 IPR012675 Beta-grasp domain superfamily ALE3EI_0630 IPR018298 Adrenodoxin, iron-sulphur binding site ALE3EI_0631 IPR022890 Ferredoxin--NADP reductase, type 2 ALE3EI_0631 IPR023753 FAD/NAD(P)-binding domain ALE3EI_0631 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_0632 IPR017726 Fe/S biogenesis protein NfuA ALE3EI_0632 IPR034904 Fe-S cluster assembly domain superfamily ALE3EI_0632 IPR035903 HesB-like domain superfamily ALE3EI_0632 IPR000361 FeS cluster biogenesis ALE3EI_0632 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal ALE3EI_0633 IPR034904 Fe-S cluster assembly domain superfamily ALE3EI_0633 IPR002744 MIP18 family-like ALE3EI_0633 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ALE3EI_0633 IPR019591 Mrp/NBP35 ATP-binding protein ALE3EI_0633 IPR000808 Mrp, conserved site ALE3EI_0633 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0634 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain ALE3EI_0634 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily ALE3EI_0634 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0634 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding ALE3EI_0636 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type ALE3EI_0636 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_0637 IPR004276 Glycosyltransferase family 28, N-terminal domain ALE3EI_0637 IPR007235 Glycosyl transferase, family 28, C-terminal ALE3EI_0637 IPR006009 N-acetylglucosaminyltransferase, MurG ALE3EI_0638 IPR031967 PhoR, single Cache-like domain ALE3EI_0638 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0638 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0638 IPR005467 Histidine kinase domain ALE3EI_0638 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_0638 IPR013767 PAS fold ALE3EI_0638 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_0638 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_0638 IPR000014 PAS domain ALE3EI_0638 IPR035965 PAS domain superfamily ALE3EI_0639 IPR011006 CheY-like superfamily ALE3EI_0639 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0639 IPR001867 OmpR/PhoB-type DNA-binding domain ALE3EI_0639 IPR039420 Transcriptional regulatory protein WalR-like ALE3EI_0639 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_0639 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0644 IPR002307 Tyrosine-tRNA ligase ALE3EI_0644 IPR036986 RNA-binding S4 domain superfamily ALE3EI_0644 IPR002942 RNA-binding S4 domain ALE3EI_0644 IPR002305 Aminoacyl-tRNA synthetase, class Ic ALE3EI_0644 IPR024088 Tyrosine-tRNA ligase, bacterial-type ALE3EI_0644 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_0644 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 ALE3EI_0645 IPR005886 UDP-glucose 4-epimerase ALE3EI_0645 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0645 IPR016040 NAD(P)-binding domain ALE3EI_0647 IPR032466 Metal-dependent hydrolase ALE3EI_0647 IPR006680 Amidohydrolase-related ALE3EI_0647 IPR011059 Metal-dependent hydrolase, composite domain superfamily ALE3EI_0647 IPR002195 Dihydroorotase, conserved site ALE3EI_0647 IPR004722 Dihydroorotase ALE3EI_0648 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0648 IPR001173 Glycosyltransferase 2-like ALE3EI_0648 IPR039528 DPM1-like ALE3EI_0651 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal ALE3EI_0651 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal ALE3EI_0651 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising ALE3EI_0652 IPR006696 Protein of unknown function DUF423 ALE3EI_0654 IPR007395 Putative neutral zinc metallopeptidase ALE3EI_0655 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain ALE3EI_0655 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding ALE3EI_0655 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ALE3EI_0655 IPR025709 Leucyl-tRNA synthetase, editing domain ALE3EI_0655 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_0655 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ALE3EI_0655 IPR015413 Methionyl/Leucyl tRNA synthetase ALE3EI_0655 IPR002302 Leucine-tRNA ligase ALE3EI_0656 IPR004513 Cell division protein FtsX ALE3EI_0656 IPR040690 FtsX, extracellular domain ALE3EI_0659 IPR003824 Undecaprenyl-diphosphatase UppP ALE3EI_0660 IPR020103 Pseudouridine synthase, catalytic domain superfamily ALE3EI_0660 IPR002501 Pseudouridine synthase II, N-terminal ALE3EI_0660 IPR014780 tRNA pseudouridine synthase II, TruB ALE3EI_0662 IPR000182 GNAT domain ALE3EI_0662 IPR025777 GMP synthetase ATP pyrophosphatase domain ALE3EI_0662 IPR001674 GMP synthase, C-terminal ALE3EI_0662 IPR011257 DNA glycosylase ALE3EI_0662 IPR029062 Class I glutamine amidotransferase-like ALE3EI_0662 IPR005019 Methyladenine glycosylase ALE3EI_0662 IPR016181 Acyl-CoA N-acyltransferase ALE3EI_0662 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_0662 IPR017926 Glutamine amidotransferase ALE3EI_0664 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type ALE3EI_0665 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal ALE3EI_0665 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase ALE3EI_0665 IPR016181 Acyl-CoA N-acyltransferase ALE3EI_0667 IPR002563 Flavin reductase like domain ALE3EI_0667 IPR012349 FMN-binding split barrel ALE3EI_0668 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0668 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0668 IPR003660 HAMP domain ALE3EI_0668 IPR005467 Histidine kinase domain ALE3EI_0668 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_0668 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_0668 IPR000014 PAS domain ALE3EI_0668 IPR000700 PAS-associated, C-terminal ALE3EI_0668 IPR035965 PAS domain superfamily ALE3EI_0668 IPR013767 PAS fold ALE3EI_0668 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_0670 IPR001310 Histidine triad (HIT) protein ALE3EI_0670 IPR011146 HIT-like domain ALE3EI_0670 IPR036265 HIT-like superfamily ALE3EI_0670 IPR019808 Histidine triad, conserved site ALE3EI_0671 IPR023459 Transcription elongation factor GreA/GreB family ALE3EI_0671 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal ALE3EI_0671 IPR028624 Transcription elongation factor GreA/GreB ALE3EI_0671 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily ALE3EI_0671 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily ALE3EI_0671 IPR006359 Transcription elongation factor GreA ALE3EI_0671 IPR018151 Transcription elongation factor, GreA/GreB, conserved site ALE3EI_0671 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal ALE3EI_0674 IPR000352 Peptide chain release factor class I ALE3EI_0674 IPR004374 Peptide chain release factor 2 ALE3EI_0674 IPR005139 Peptide chain release factor ALE3EI_0677 IPR006419 Nicotinamide mononucleotide transporter PnuC ALE3EI_0679 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase ALE3EI_0679 IPR038597 GGGP/HepGP synthase superfamily ALE3EI_0679 IPR010946 Geranylgeranylglyceryl phosphate synthase ALE3EI_0681 IPR042172 Adenosylhomocysteinase-like superfamily ALE3EI_0681 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0681 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site ALE3EI_0681 IPR000043 Adenosylhomocysteinase-like ALE3EI_0681 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ALE3EI_0683 IPR018261 Ribosomal protein L27, conserved site ALE3EI_0683 IPR001684 Ribosomal protein L27 ALE3EI_0684 IPR028909 Ribosomal protein L21-like ALE3EI_0684 IPR018258 Ribosomal protein L21, conserved site ALE3EI_0684 IPR001787 Ribosomal protein L21 ALE3EI_0684 IPR036164 L21-like superfamily ALE3EI_0688 IPR005170 Transporter-associated domain ALE3EI_0688 IPR016169 FAD-binding, type PCMH, subdomain 2 ALE3EI_0688 IPR000644 CBS domain ALE3EI_0688 IPR036318 FAD-binding, type PCMH-like superfamily ALE3EI_0689 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_0689 IPR011344 Single-stranded DNA-binding protein ALE3EI_0689 IPR000424 Primosome PriB/single-strand DNA-binding ALE3EI_0690 IPR011257 DNA glycosylase ALE3EI_0690 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif ALE3EI_0690 IPR003265 HhH-GPD domain ALE3EI_0690 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal ALE3EI_0690 IPR029119 MutY, C-terminal ALE3EI_0690 IPR015797 NUDIX hydrolase-like domain superfamily ALE3EI_0690 IPR005760 A/G-specific adenine glycosylase MutY ALE3EI_0691 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily ALE3EI_0691 IPR000119 Histone-like DNA-binding protein ALE3EI_0691 IPR020816 Histone-like DNA-binding protein, conserved site ALE3EI_0692 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_0692 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G ALE3EI_0692 IPR004659 Ribonuclease E/G ALE3EI_0692 IPR003029 S1 domain ALE3EI_0692 IPR022967 RNA-binding domain, S1 ALE3EI_0696 IPR007197 Radical SAM ALE3EI_0696 IPR006638 Elp3/MiaB/NifB ALE3EI_0696 IPR024177 Biotin synthase ALE3EI_0696 IPR013785 Aldolase-type TIM barrel ALE3EI_0696 IPR010722 Biotin and thiamin synthesis-associated domain ALE3EI_0696 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB ALE3EI_0697 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 ALE3EI_0697 IPR016039 Thiolase-like ALE3EI_0697 IPR000794 Beta-ketoacyl synthase ALE3EI_0697 IPR018201 Beta-ketoacyl synthase, active site ALE3EI_0697 IPR014030 Beta-ketoacyl synthase, N-terminal ALE3EI_0697 IPR014031 Beta-ketoacyl synthase, C-terminal ALE3EI_0697 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ALE3EI_0699 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA ALE3EI_0699 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_0699 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_0699 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_0699 IPR005814 Aminotransferase class-III ALE3EI_0700 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0700 IPR004472 Dethiobiotin synthase BioD ALE3EI_0701 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_0701 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_0701 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_0701 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type ALE3EI_0701 IPR004839 Aminotransferase, class I/classII ALE3EI_0701 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ALE3EI_0702 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal ALE3EI_0702 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal ALE3EI_0702 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit ALE3EI_0703 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0703 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal ALE3EI_0703 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ALE3EI_0703 IPR003593 AAA+ ATPase domain ALE3EI_0703 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily ALE3EI_0703 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain ALE3EI_0703 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site ALE3EI_0703 IPR005722 ATP synthase, F1 complex, beta subunit ALE3EI_0704 IPR005786 Branched-chain amino acid aminotransferase II ALE3EI_0704 IPR036038 Aminotransferase-like, PLP-dependent enzymes ALE3EI_0704 IPR033939 Branched-chain aminotransferase ALE3EI_0704 IPR018300 Aminotransferase, class IV, conserved site ALE3EI_0704 IPR001544 Aminotransferase class IV ALE3EI_0706 IPR017932 Glutamine amidotransferase type 2 domain ALE3EI_0706 IPR035466 GlmS/AgaS, SIS domain 1 ALE3EI_0706 IPR035490 GlmS/FrlB, SIS domain 2 ALE3EI_0706 IPR029055 Nucleophile aminohydrolases, N-terminal ALE3EI_0706 IPR001347 Sugar isomerase (SIS) ALE3EI_0706 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising ALE3EI_0708 IPR013534 Starch synthase, catalytic domain ALE3EI_0708 IPR011835 Bacterial/plant glycogen synthase ALE3EI_0708 IPR001296 Glycosyl transferase, family 1 ALE3EI_0709 IPR003721 Pantoate-beta-alanine ligase ALE3EI_0709 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain ALE3EI_0709 IPR004821 Cytidyltransferase-like domain ALE3EI_0709 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_0710 IPR009010 Aspartate decarboxylase-like domain superfamily ALE3EI_0710 IPR003190 Aspartate decarboxylase ALE3EI_0719 IPR011006 CheY-like superfamily ALE3EI_0719 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_0719 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0719 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_0719 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0720 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ALE3EI_0720 IPR005467 Histidine kinase domain ALE3EI_0720 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0720 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0722 IPR011006 CheY-like superfamily ALE3EI_0722 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_0722 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0722 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_0722 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0723 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0723 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_0723 IPR011006 CheY-like superfamily ALE3EI_0723 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_0724 IPR016381 Signal transduction histidine kinase, DegS ALE3EI_0724 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0724 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0724 IPR005467 Histidine kinase domain ALE3EI_0724 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ALE3EI_0724 IPR008595 Sensor DegS ALE3EI_0725 IPR003593 AAA+ ATPase domain ALE3EI_0725 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0725 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain ALE3EI_0725 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_0725 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALE3EI_0725 IPR041166 LapB, rubredoxin metal binding domain ALE3EI_0725 IPR004504 DNA repair protein RadA ALE3EI_0727 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ALE3EI_0727 IPR006089 Acyl-CoA dehydrogenase, conserved site ALE3EI_0727 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ALE3EI_0727 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ALE3EI_0727 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ALE3EI_0727 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ALE3EI_0727 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ALE3EI_0728 IPR020471 Aldo/keto reductase ALE3EI_0728 IPR023210 NADP-dependent oxidoreductase domain ALE3EI_0728 IPR036812 NADP-dependent oxidoreductase domain superfamily ALE3EI_0729 IPR036737 OmpA-like domain superfamily ALE3EI_0729 IPR006690 Outer membrane protein, OmpA-like, conserved site ALE3EI_0729 IPR006665 OmpA-like domain ALE3EI_0729 IPR006664 Outer membrane protein, bacterial ALE3EI_0729 IPR039567 Glycine zipper domain ALE3EI_0730 IPR020847 AP endonuclease 1, binding site ALE3EI_0730 IPR004808 AP endonuclease 1 ALE3EI_0730 IPR020848 AP endonuclease 1, conserved site ALE3EI_0730 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ALE3EI_0730 IPR005135 Endonuclease/exonuclease/phosphatase ALE3EI_0736 IPR036621 Anticodon-binding domain superfamily ALE3EI_0736 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 ALE3EI_0736 IPR022961 Glycine-tRNA ligase, bacterial ALE3EI_0736 IPR004154 Anticodon-binding ALE3EI_0736 IPR006195 Aminoacyl-tRNA synthetase, class II ALE3EI_0736 IPR033731 Glycyl-tRNA synthetase-like core domain ALE3EI_0736 IPR002315 Glycyl-tRNA synthetase ALE3EI_0738 IPR029057 Phosphoribosyltransferase-like ALE3EI_0738 IPR000836 Phosphoribosyltransferase domain ALE3EI_0738 IPR005222 Competence protein ComF ALE3EI_0740 IPR036526 Carbon-nitrogen hydrolase superfamily ALE3EI_0740 IPR001110 Uncharacterised protein family UPF0012, conserved site ALE3EI_0740 IPR003010 Carbon-nitrogen hydrolase ALE3EI_0742 IPR002016 Haem peroxidase ALE3EI_0742 IPR019793 Peroxidases heam-ligand binding site ALE3EI_0742 IPR019794 Peroxidase, active site ALE3EI_0742 IPR010255 Haem peroxidase superfamily ALE3EI_0742 IPR000763 Catalase-peroxidase haem ALE3EI_0743 IPR004839 Aminotransferase, class I/classII ALE3EI_0743 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_0743 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_0743 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_0744 IPR000014 PAS domain ALE3EI_0744 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_0744 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_0744 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0744 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0744 IPR011006 CheY-like superfamily ALE3EI_0744 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily ALE3EI_0744 IPR036641 HPT domain superfamily ALE3EI_0744 IPR005467 Histidine kinase domain ALE3EI_0744 IPR040642 Histidine kinase receptor ArcB, transmembrane domain ALE3EI_0744 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0744 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB ALE3EI_0744 IPR013767 PAS fold ALE3EI_0744 IPR035965 PAS domain superfamily ALE3EI_0744 IPR000700 PAS-associated, C-terminal ALE3EI_0744 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain ALE3EI_0744 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_0745 IPR009051 Alpha-helical ferredoxin ALE3EI_0745 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal ALE3EI_0745 IPR036010 2Fe-2S ferredoxin-like superfamily ALE3EI_0745 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein ALE3EI_0745 IPR012675 Beta-grasp domain superfamily ALE3EI_0745 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALE3EI_0745 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ALE3EI_0745 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALE3EI_0746 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_0746 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site ALE3EI_0746 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily ALE3EI_0746 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal ALE3EI_0746 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria ALE3EI_0746 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ALE3EI_0746 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily ALE3EI_0749 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ALE3EI_0749 IPR001714 Peptidase M24, methionine aminopeptidase ALE3EI_0749 IPR007865 Aminopeptidase P, N-terminal ALE3EI_0749 IPR000994 Peptidase M24 ALE3EI_0749 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ALE3EI_0749 IPR036005 Creatinase/aminopeptidase-like ALE3EI_0750 IPR004685 Branched-chain amino acid transport system II carrier protein ALE3EI_0751 IPR029058 Alpha/Beta hydrolase fold ALE3EI_0751 IPR000073 Alpha/beta hydrolase fold-1 ALE3EI_0751 IPR000639 Epoxide hydrolase-like ALE3EI_0754 IPR036921 PurM-like, N-terminal domain superfamily ALE3EI_0754 IPR016188 PurM-like, N-terminal domain ALE3EI_0754 IPR006283 Thiamine-monophosphate kinase ALE3EI_0754 IPR036676 PurM-like, C-terminal domain superfamily ALE3EI_0754 IPR010918 PurM-like, C-terminal domain ALE3EI_0760 IPR022394 Methylamine utilisation protein, MauG ALE3EI_0760 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase ALE3EI_0760 IPR004852 Di-haem cytochrome c peroxidase ALE3EI_0760 IPR036909 Cytochrome c-like domain superfamily ALE3EI_0760 IPR009056 Cytochrome c-like domain ALE3EI_0761 IPR016092 FeS cluster insertion protein ALE3EI_0761 IPR011302 Iron-binding protein IscA, proteobacteria ALE3EI_0761 IPR035903 HesB-like domain superfamily ALE3EI_0761 IPR000361 FeS cluster biogenesis ALE3EI_0761 IPR017870 FeS cluster insertion, C-terminal, conserved site ALE3EI_0762 IPR000825 SUF system FeS cluster assembly, SufBD ALE3EI_0762 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ALE3EI_0762 IPR010231 SUF system FeS cluster assembly, SufB ALE3EI_0764 IPR017871 ABC transporter, conserved site ALE3EI_0764 IPR010230 FeS cluster assembly SUF system, ATPase SufC ALE3EI_0764 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0764 IPR003439 ABC transporter-like ALE3EI_0765 IPR000825 SUF system FeS cluster assembly, SufBD ALE3EI_0765 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ALE3EI_0765 IPR011542 SUF system FeS cluster assembly, SufD ALE3EI_0766 IPR010970 Cysteine desulfurase, SufS ALE3EI_0766 IPR000192 Aminotransferase class V domain ALE3EI_0766 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_0766 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_0766 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_0766 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ALE3EI_0766 IPR016454 Cysteine desulfurase ALE3EI_0768 IPR003808 Fe-S metabolism associated domain, SufE-like ALE3EI_0769 IPR034904 Fe-S cluster assembly domain superfamily ALE3EI_0769 IPR002744 MIP18 family-like ALE3EI_0773 IPR016496 GTPase HflX ALE3EI_0773 IPR025121 GTPase HflX, N-terminal ALE3EI_0773 IPR032305 GTP-binding protein, middle domain ALE3EI_0773 IPR042108 GTPase HflX, N-terminal domain superfamily ALE3EI_0773 IPR030394 HflX-type guanine nucleotide-binding (G) domain ALE3EI_0773 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0773 IPR006073 GTP binding domain ALE3EI_0778 IPR002368 Outer membrane protein, OmpA ALE3EI_0778 IPR006665 OmpA-like domain ALE3EI_0778 IPR006690 Outer membrane protein, OmpA-like, conserved site ALE3EI_0778 IPR006664 Outer membrane protein, bacterial ALE3EI_0778 IPR000498 Outer membrane protein OmpA-like, transmembrane domain ALE3EI_0778 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ALE3EI_0778 IPR036737 OmpA-like domain superfamily ALE3EI_0782 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type ALE3EI_0782 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase ALE3EI_0782 IPR035909 Methylesterase CheB, C-terminal ALE3EI_0782 IPR011006 CheY-like superfamily ALE3EI_0782 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0783 IPR013515 Phytochrome, central region ALE3EI_0783 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0783 IPR013654 PAS fold-2 ALE3EI_0783 IPR016132 Phytochrome chromophore attachment domain ALE3EI_0783 IPR035965 PAS domain superfamily ALE3EI_0783 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_0783 IPR003018 GAF domain ALE3EI_0783 IPR029016 GAF-like domain superfamily ALE3EI_0783 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_0783 IPR005467 Histidine kinase domain ALE3EI_0783 IPR001294 Phytochrome ALE3EI_0783 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0786 IPR023996 TonB-dependent outer membrane protein, SusC/RagA ALE3EI_0786 IPR012910 TonB-dependent receptor, plug domain ALE3EI_0786 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_0786 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site ALE3EI_0786 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_0786 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ALE3EI_0788 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like ALE3EI_0788 IPR004981 Tryptophan 2,3-dioxygenase ALE3EI_0790 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALE3EI_0790 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal ALE3EI_0790 IPR005956 4-hydroxyphenylpyruvate dioxygenase ALE3EI_0790 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal ALE3EI_0790 IPR037523 Vicinal oxygen chelate (VOC) domain ALE3EI_0790 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ALE3EI_0791 IPR005708 Homogentisate 1,2-dioxygenase ALE3EI_0791 IPR014710 RmlC-like jelly roll fold ALE3EI_0791 IPR011051 RmlC-like cupin domain superfamily ALE3EI_0792 IPR001423 Lysophospholipase patatin, conserved site ALE3EI_0792 IPR002641 Patatin-like phospholipase domain ALE3EI_0792 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ALE3EI_0793 IPR004791 UvrABC system, subunit C ALE3EI_0793 IPR038476 UvrC homology region 2 superfamily ALE3EI_0793 IPR001162 UvrC family homology region ALE3EI_0793 IPR036876 UVR domain superfamily ALE3EI_0793 IPR035901 GIY-YIG endonuclease superfamily ALE3EI_0793 IPR010994 RuvA domain 2-like ALE3EI_0793 IPR000305 GIY-YIG endonuclease ALE3EI_0793 IPR001943 UVR domain ALE3EI_0794 IPR041107 RimK, PreATP-grasp domain ALE3EI_0794 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX ALE3EI_0794 IPR011761 ATP-grasp fold ALE3EI_0794 IPR013651 ATP-grasp fold, RimK-type ALE3EI_0794 IPR013815 ATP-grasp fold, subdomain 1 ALE3EI_0794 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK ALE3EI_0796 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK ALE3EI_0796 IPR011761 ATP-grasp fold ALE3EI_0796 IPR041107 RimK, PreATP-grasp domain ALE3EI_0796 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX ALE3EI_0796 IPR013815 ATP-grasp fold, subdomain 1 ALE3EI_0796 IPR013651 ATP-grasp fold, RimK-type ALE3EI_0798 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ALE3EI_0798 IPR002698 5-formyltetrahydrofolate cyclo-ligase ALE3EI_0798 IPR037171 NagB/RpiA transferase-like ALE3EI_0800 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_0800 IPR011006 CheY-like superfamily ALE3EI_0800 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0800 IPR005467 Histidine kinase domain ALE3EI_0800 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_0800 IPR015387 LuxQ, periplasmic ALE3EI_0800 IPR029151 Periplasmic sensor-like domain superfamily ALE3EI_0800 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_0800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_0801 IPR001872 Peptidase A8, signal peptidase II ALE3EI_0804 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding ALE3EI_0804 IPR002301 Isoleucine-tRNA ligase ALE3EI_0804 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain ALE3EI_0804 IPR023586 Isoleucine-tRNA ligase, type 2 ALE3EI_0804 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_0804 IPR002300 Aminoacyl-tRNA synthetase, class Ia ALE3EI_0804 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain ALE3EI_0804 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ALE3EI_0809 IPR001509 NAD-dependent epimerase/dehydratase ALE3EI_0809 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0810 IPR042089 Peptidase M13, domain 2 ALE3EI_0810 IPR024079 Metallopeptidase, catalytic domain superfamily ALE3EI_0810 IPR008753 Peptidase M13, N-terminal domain ALE3EI_0810 IPR018497 Peptidase M13, C-terminal domain ALE3EI_0810 IPR000718 Peptidase M13 ALE3EI_0812 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0812 IPR001509 NAD-dependent epimerase/dehydratase ALE3EI_0814 IPR008915 Peptidase M50 ALE3EI_0814 IPR036034 PDZ superfamily ALE3EI_0814 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase ALE3EI_0814 IPR001478 PDZ domain ALE3EI_0815 IPR013766 Thioredoxin domain ALE3EI_0815 IPR036249 Thioredoxin-like superfamily ALE3EI_0815 IPR003782 Copper chaperone SCO1/SenC ALE3EI_0817 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0817 IPR006073 GTP binding domain ALE3EI_0817 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain ALE3EI_0817 IPR030389 FeoB-type guanine nucleotide-binding (G) domain ALE3EI_0817 IPR011640 Ferrous iron transport protein B, C-terminal ALE3EI_0817 IPR003373 Ferrous iron transport protein B ALE3EI_0820 IPR037294 ABC transporter, BtuC-like ALE3EI_0820 IPR001626 ABC transporter, TroCD-like ALE3EI_0821 IPR037294 ABC transporter, BtuC-like ALE3EI_0821 IPR001626 ABC transporter, TroCD-like ALE3EI_0822 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0822 IPR003439 ABC transporter-like ALE3EI_0822 IPR017871 ABC transporter, conserved site ALE3EI_0822 IPR003593 AAA+ ATPase domain ALE3EI_0823 IPR006128 Adhesion lipoprotein ALE3EI_0823 IPR006129 Adhesin B ALE3EI_0823 IPR006127 Periplasmic solute binding protein, ZnuA-like ALE3EI_0825 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily ALE3EI_0825 IPR001367 Iron dependent repressor, metal binding and dimerisation domain ALE3EI_0825 IPR001626 ABC transporter, TroCD-like ALE3EI_0825 IPR022689 Iron dependent repressor ALE3EI_0825 IPR037294 ABC transporter, BtuC-like ALE3EI_0825 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0826 IPR008971 HSP40/DnaJ peptide-binding ALE3EI_0826 IPR001623 DnaJ domain ALE3EI_0826 IPR002939 Chaperone DnaJ, C-terminal ALE3EI_0826 IPR036869 Chaperone J-domain superfamily ALE3EI_0826 IPR012724 Chaperone DnaJ ALE3EI_0826 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily ALE3EI_0826 IPR001305 Heat shock protein DnaJ, cysteine-rich domain ALE3EI_0826 IPR018253 DnaJ domain, conserved site ALE3EI_0827 IPR036249 Thioredoxin-like superfamily ALE3EI_0827 IPR009474 Putative bacilliredoxin, YphP/YqiW family ALE3EI_0830 IPR006638 Elp3/MiaB/NifB ALE3EI_0830 IPR007197 Radical SAM ALE3EI_0830 IPR013785 Aldolase-type TIM barrel ALE3EI_0830 IPR008792 Coenzyme PQQ synthesis protein D ALE3EI_0830 IPR023885 4Fe4S-binding SPASM domain ALE3EI_0831 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_0831 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ALE3EI_0831 IPR001753 Enoyl-CoA hydratase/isomerase ALE3EI_0831 IPR014748 Enoyl-CoA hydratase, C-terminal ALE3EI_0832 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_0832 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_0832 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_0832 IPR005467 Histidine kinase domain ALE3EI_0832 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_0832 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_0832 IPR003660 HAMP domain ALE3EI_0833 IPR005265 Protoporphyrinogen oxidase HemJ-like ALE3EI_0836 IPR033659 Ferrochelatase, N-terminal ALE3EI_0836 IPR001015 Ferrochelatase ALE3EI_0836 IPR033644 Ferrochelatase, C-terminal ALE3EI_0838 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase ALE3EI_0838 IPR018214 Glutamyl-tRNA reductase, conserved site ALE3EI_0838 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal ALE3EI_0838 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily ALE3EI_0838 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily ALE3EI_0838 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0838 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ALE3EI_0838 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain ALE3EI_0839 IPR022417 Porphobilinogen deaminase, N-terminal ALE3EI_0839 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily ALE3EI_0839 IPR022418 Porphobilinogen deaminase, C-terminal ALE3EI_0839 IPR000860 Porphobilinogen deaminase ALE3EI_0839 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site ALE3EI_0841 IPR000257 Uroporphyrinogen decarboxylase (URO-D) ALE3EI_0841 IPR038071 UROD/MetE-like superfamily ALE3EI_0841 IPR006361 Uroporphyrinogen decarboxylase HemE ALE3EI_0844 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily ALE3EI_0844 IPR001260 Coproporphyrinogen III oxidase, aerobic ALE3EI_0844 IPR018375 Coproporphyrinogen III oxidase, conserved site ALE3EI_0845 IPR013785 Aldolase-type TIM barrel ALE3EI_0845 IPR030656 Delta-aminolevulinic acid dehydratase, active site ALE3EI_0845 IPR001731 Delta-aminolevulinic acid dehydratase ALE3EI_0847 IPR000644 CBS domain ALE3EI_0847 IPR002550 CNNM, transmembrane domain ALE3EI_0850 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site ALE3EI_0850 IPR023546 Methylated-DNA--protein-cysteine methyltransferase ALE3EI_0850 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain ALE3EI_0850 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain ALE3EI_0850 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding ALE3EI_0850 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily ALE3EI_0850 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0854 IPR001223 Glycoside hydrolase family 18, catalytic domain ALE3EI_0854 IPR001579 Glycoside hydrolase, chitinase active site ALE3EI_0854 IPR017853 Glycoside hydrolase superfamily ALE3EI_0854 IPR013783 Immunoglobulin-like fold ALE3EI_0854 IPR003961 Fibronectin type III ALE3EI_0854 IPR029070 Chitinase insertion domain superfamily ALE3EI_0854 IPR036116 Fibronectin type III superfamily ALE3EI_0854 IPR036573 Carbohydrate-binding module superfamily 5/12 ALE3EI_0854 IPR003610 Carbohydrate-binding module family 5/12 ALE3EI_0854 IPR011583 Chitinase II ALE3EI_0855 IPR003593 AAA+ ATPase domain ALE3EI_0855 IPR003439 ABC transporter-like ALE3EI_0855 IPR017871 ABC transporter, conserved site ALE3EI_0855 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0855 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ALE3EI_0856 IPR012791 3-oxoacid CoA-transferase, subunit B ALE3EI_0856 IPR004165 Coenzyme A transferase family I ALE3EI_0856 IPR004164 Coenzyme A transferase active site ALE3EI_0856 IPR037171 NagB/RpiA transferase-like ALE3EI_0857 IPR012792 3-oxoacid CoA-transferase, subunit A ALE3EI_0857 IPR004165 Coenzyme A transferase family I ALE3EI_0857 IPR004163 Coenzyme A transferase binding site ALE3EI_0857 IPR037171 NagB/RpiA transferase-like ALE3EI_0858 IPR001460 Penicillin-binding protein, transpeptidase ALE3EI_0858 IPR036950 Penicillin binding protein transglycosylase domain ALE3EI_0858 IPR012338 Beta-lactamase/transpeptidase-like ALE3EI_0858 IPR001264 Glycosyl transferase, family 51 ALE3EI_0858 IPR023346 Lysozyme-like domain superfamily ALE3EI_0859 IPR020018 Gliding motility-associated lipoprotein, GldH ALE3EI_0860 IPR007557 PSP1, C-terminal ALE3EI_0861 IPR001763 Rhodanese-like domain ALE3EI_0861 IPR036873 Rhodanese-like domain superfamily ALE3EI_0861 IPR040503 UPF0176, acylphosphatase-like domain ALE3EI_0861 IPR022111 Rhodanase, C-terminal ALE3EI_0861 IPR020936 Uncharacterised protein family UPF0176 ALE3EI_0862 IPR013765 DNA recombination and repair protein RecA ALE3EI_0862 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain ALE3EI_0862 IPR023400 DNA recombination and repair protein RecA, C-terminal ALE3EI_0862 IPR020584 DNA recombination/repair protein RecA, conserved site ALE3EI_0862 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0862 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface ALE3EI_0862 IPR003593 AAA+ ATPase domain ALE3EI_0866 IPR024109 Tryptophan-tRNA ligase, bacterial-type ALE3EI_0866 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ALE3EI_0866 IPR002305 Aminoacyl-tRNA synthetase, class Ic ALE3EI_0866 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_0866 IPR002306 Tryptophan-tRNA ligase ALE3EI_0867 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_0867 IPR010994 RuvA domain 2-like ALE3EI_0867 IPR041614 DprA, winged helix domain ALE3EI_0867 IPR003488 DNA recombination-mediator protein A ALE3EI_0874 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type ALE3EI_0874 IPR005835 Nucleotidyl transferase domain ALE3EI_0874 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0876 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase ALE3EI_0876 IPR036157 dUTPase-like superfamily ALE3EI_0876 IPR033704 dUTPase, trimeric ALE3EI_0876 IPR029054 dUTPase-like ALE3EI_0879 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site ALE3EI_0879 IPR000131 ATP synthase, F1 complex, gamma subunit ALE3EI_0879 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily ALE3EI_0880 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily ALE3EI_0880 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain ALE3EI_0880 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ALE3EI_0880 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily ALE3EI_0880 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0880 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily ALE3EI_0880 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain ALE3EI_0880 IPR000793 ATP synthase, alpha subunit, C-terminal ALE3EI_0880 IPR005294 ATP synthase, F1 complex, alpha subunit ALE3EI_0880 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site ALE3EI_0881 IPR000711 ATPase, OSCP/delta subunit ALE3EI_0881 IPR020781 ATPase, OSCP/delta subunit, conserved site ALE3EI_0881 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily ALE3EI_0882 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily ALE3EI_0882 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast ALE3EI_0882 IPR005864 ATP synthase, F0 complex, subunit b, bacterial ALE3EI_0883 IPR000454 ATP synthase, F0 complex, subunit C ALE3EI_0883 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast ALE3EI_0883 IPR035921 F/V-ATP synthase subunit C superfamily ALE3EI_0883 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site ALE3EI_0883 IPR038662 F1F0 ATP synthase subunit C superfamily ALE3EI_0883 IPR002379 V-ATPase proteolipid subunit C-like domain ALE3EI_0884 IPR000568 ATP synthase, F0 complex, subunit A ALE3EI_0884 IPR023011 ATP synthase, F0 complex, subunit A, active site ALE3EI_0884 IPR035908 ATP synthase, F0 complex, subunit A superfamily ALE3EI_0889 IPR001433 Oxidoreductase FAD/NAD(P)-binding ALE3EI_0889 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ALE3EI_0889 IPR012292 Globin/Protoglobin ALE3EI_0889 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ALE3EI_0889 IPR023950 Flavohemoprotein ALE3EI_0889 IPR000951 Phthalate dioxygenase reductase ALE3EI_0889 IPR017938 Riboflavin synthase-like beta-barrel ALE3EI_0889 IPR017927 FAD-binding domain, ferredoxin reductase-type ALE3EI_0889 IPR000971 Globin ALE3EI_0889 IPR009050 Globin-like superfamily ALE3EI_0894 IPR011054 Rudiment single hybrid motif ALE3EI_0894 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal ALE3EI_0894 IPR011761 ATP-grasp fold ALE3EI_0894 IPR016185 Pre-ATP-grasp domain superfamily ALE3EI_0894 IPR020559 Phosphoribosylglycinamide synthetase, conserved site ALE3EI_0894 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily ALE3EI_0894 IPR020560 Phosphoribosylglycinamide synthetase, C-domain ALE3EI_0894 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ALE3EI_0894 IPR013815 ATP-grasp fold, subdomain 1 ALE3EI_0894 IPR000115 Phosphoribosylglycinamide synthetase ALE3EI_0895 IPR042099 AMP-dependent synthetase-like superfamily ALE3EI_0895 IPR011880 Phenylacetate-CoA ligase ALE3EI_0895 IPR000873 AMP-dependent synthetase/ligase ALE3EI_0895 IPR028154 AMP-dependent ligase, C-terminal ALE3EI_0896 IPR001173 Glycosyltransferase 2-like ALE3EI_0896 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0897 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase ALE3EI_0897 IPR003362 Bacterial sugar transferase ALE3EI_0897 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ ALE3EI_0898 IPR005886 UDP-glucose 4-epimerase ALE3EI_0898 IPR016040 NAD(P)-binding domain ALE3EI_0898 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0899 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal ALE3EI_0899 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily ALE3EI_0899 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ALE3EI_0899 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0899 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type ALE3EI_0899 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal ALE3EI_0899 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation ALE3EI_0899 IPR017476 UDP-glucose/GDP-mannose dehydrogenase ALE3EI_0900 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALE3EI_0900 IPR001296 Glycosyl transferase, family 1 ALE3EI_0900 IPR017814 Mycothiol biosynthesis protein, MshA ALE3EI_0907 IPR005913 dTDP-4-dehydrorhamnose reductase family ALE3EI_0907 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0907 IPR029903 RmlD-like substrate binding domain ALE3EI_0908 IPR011051 RmlC-like cupin domain superfamily ALE3EI_0908 IPR014710 RmlC-like jelly roll fold ALE3EI_0908 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related ALE3EI_0909 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form ALE3EI_0909 IPR005835 Nucleotidyl transferase domain ALE3EI_0909 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_0910 IPR005888 dTDP-glucose 4,6-dehydratase ALE3EI_0910 IPR016040 NAD(P)-binding domain ALE3EI_0910 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0913 IPR011055 Duplicated hybrid motif ALE3EI_0913 IPR016047 Peptidase M23 ALE3EI_0914 IPR006312 Sec-independent protein translocase protein TatA/E ALE3EI_0914 IPR003369 Sec-independent protein translocase protein TatA/B/E ALE3EI_0916 IPR036779 LysM domain superfamily ALE3EI_0916 IPR018392 LysM domain ALE3EI_0916 IPR010611 3D domain ALE3EI_0916 IPR036908 RlpA-like domain superfamily ALE3EI_0917 IPR015824 Phosphoglycerate kinase, N-terminal ALE3EI_0917 IPR036043 Phosphoglycerate kinase superfamily ALE3EI_0917 IPR001576 Phosphoglycerate kinase ALE3EI_0920 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG ALE3EI_0920 IPR026904 GidA associated domain 3 ALE3EI_0920 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_0920 IPR020595 MnmG-related, conserved site ALE3EI_0920 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related ALE3EI_0921 IPR002036 Endoribonuclease YbeY ALE3EI_0921 IPR023091 Metalloprotease catalytic domain superfamily, predicted ALE3EI_0923 IPR033910 Glutamyl-tRNA synthetase ALE3EI_0923 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain ALE3EI_0923 IPR000924 Glutamyl/glutaminyl-tRNA synthetase ALE3EI_0923 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial ALE3EI_0923 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ALE3EI_0923 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding ALE3EI_0923 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_0923 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 ALE3EI_0925 IPR010200 HflC ALE3EI_0925 IPR036013 Band 7/SPFH domain superfamily ALE3EI_0925 IPR001107 Band 7 domain ALE3EI_0929 IPR000917 Sulfatase, N-terminal ALE3EI_0929 IPR040423 Phosphoethanolamine transferase ALE3EI_0929 IPR012549 Phosphoethanolamine transferase, N-terminal ALE3EI_0929 IPR017850 Alkaline-phosphatase-like, core domain superfamily ALE3EI_0931 IPR004514 Glutamine-tRNA synthetase ALE3EI_0931 IPR022861 Glutamine-tRNA ligase, bacterial ALE3EI_0931 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain ALE3EI_0931 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ALE3EI_0931 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain ALE3EI_0931 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal ALE3EI_0931 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily ALE3EI_0931 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_0931 IPR000924 Glutamyl/glutaminyl-tRNA synthetase ALE3EI_0932 IPR006156 Dihydroneopterin aldolase ALE3EI_0932 IPR006157 Dihydroneopterin aldolase/epimerase domain ALE3EI_0934 IPR004476 Ribonuclease II/ribonuclease R ALE3EI_0934 IPR011129 Cold shock domain ALE3EI_0934 IPR040476 RNase II/RNase R, cold shock domain ALE3EI_0934 IPR003029 S1 domain ALE3EI_0934 IPR022967 RNA-binding domain, S1 ALE3EI_0934 IPR011805 Ribonuclease R ALE3EI_0934 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_0934 IPR013223 Ribonuclease B, N-terminal OB domain ALE3EI_0934 IPR001900 Ribonuclease II/R ALE3EI_0934 IPR022966 Ribonuclease II/R, conserved site ALE3EI_0936 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family ALE3EI_0936 IPR004785 Ribose 5-phosphate isomerase B ALE3EI_0936 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily ALE3EI_0937 IPR036837 Cation efflux protein, cytoplasmic domain superfamily ALE3EI_0937 IPR027469 Cation efflux transmembrane domain superfamily ALE3EI_0937 IPR002524 Cation efflux protein ALE3EI_0938 IPR000182 GNAT domain ALE3EI_0938 IPR016181 Acyl-CoA N-acyltransferase ALE3EI_0940 IPR006694 Fatty acid hydroxylase ALE3EI_0941 IPR004447 C-terminal-processing peptidase S41A ALE3EI_0941 IPR036034 PDZ superfamily ALE3EI_0941 IPR001478 PDZ domain ALE3EI_0941 IPR005151 Tail specific protease ALE3EI_0941 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_0942 IPR000100 Ribonuclease P ALE3EI_0942 IPR020539 Ribonuclease P, conserved site ALE3EI_0942 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALE3EI_0942 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_0944 IPR000209 Peptidase S8/S53 domain ALE3EI_0944 IPR022398 Peptidase S8, subtilisin, His-active site ALE3EI_0944 IPR034084 Thermitase-like, domain ALE3EI_0944 IPR023828 Peptidase S8, subtilisin, Ser-active site ALE3EI_0944 IPR036852 Peptidase S8/S53 domain superfamily ALE3EI_0944 IPR023827 Peptidase S8, subtilisin, Asp-active site ALE3EI_0944 IPR015500 Peptidase S8, subtilisin-related ALE3EI_0945 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ALE3EI_0945 IPR001279 Metallo-beta-lactamase ALE3EI_0946 IPR030151 K(+)/H(+) antiporter NhaP ALE3EI_0946 IPR006037 Regulator of K+ conductance, C-terminal ALE3EI_0946 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ALE3EI_0946 IPR038770 Sodium/solute symporter superfamily ALE3EI_0946 IPR006153 Cation/H+ exchanger ALE3EI_0946 IPR036318 FAD-binding, type PCMH-like superfamily ALE3EI_0946 IPR016169 FAD-binding, type PCMH, subdomain 2 ALE3EI_0946 IPR005170 Transporter-associated domain ALE3EI_0948 IPR004161 Translation elongation factor EFTu-like, domain 2 ALE3EI_0948 IPR038363 LepA, C-terminal domain superfamily ALE3EI_0948 IPR013842 GTP-binding protein LepA, C-terminal ALE3EI_0948 IPR035654 Elongation factor 4, domain IV ALE3EI_0948 IPR006297 Elongation factor 4 ALE3EI_0948 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0948 IPR005225 Small GTP-binding protein domain ALE3EI_0948 IPR000795 Transcription factor, GTP-binding domain ALE3EI_0948 IPR000640 Elongation factor EFG, domain V-like ALE3EI_0948 IPR009000 Translation protein, beta-barrel domain superfamily ALE3EI_0948 IPR035647 EF-G domain III/V-like ALE3EI_0950 IPR013785 Aldolase-type TIM barrel ALE3EI_0950 IPR018517 tRNA-dihydrouridine synthase, conserved site ALE3EI_0950 IPR001269 tRNA-dihydrouridine synthase ALE3EI_0950 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 ALE3EI_0950 IPR035587 DUS-like, FMN-binding domain ALE3EI_0950 IPR032887 tRNA-dihydrouridine synthase B ALE3EI_0950 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal ALE3EI_0951 IPR003838 ABC transporter permease protein domain ALE3EI_0951 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E ALE3EI_0951 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type ALE3EI_0951 IPR025857 MacB-like periplasmic core domain ALE3EI_0952 IPR023799 Ribosome-binding factor A domain superfamily ALE3EI_0952 IPR000238 Ribosome-binding factor A ALE3EI_0952 IPR015946 K homology domain-like, alpha/beta ALE3EI_0953 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALE3EI_0953 IPR017515 Methylmalonyl-CoA epimerase ALE3EI_0953 IPR018146 Glyoxalase I, conserved site ALE3EI_0953 IPR037523 Vicinal oxygen chelate (VOC) domain ALE3EI_0954 IPR017938 Riboflavin synthase-like beta-barrel ALE3EI_0954 IPR026017 Lumazine-binding domain ALE3EI_0954 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily ALE3EI_0954 IPR001783 Lumazine-binding protein ALE3EI_0955 IPR005255 PdxA family ALE3EI_0957 IPR002677 Ribosomal protein L32p ALE3EI_0957 IPR011332 Zinc-binding ribosomal protein ALE3EI_0958 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALE3EI_0958 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal ALE3EI_0958 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 ALE3EI_0958 IPR016039 Thiolase-like ALE3EI_0959 IPR000089 Biotin/lipoyl attachment ALE3EI_0959 IPR011053 Single hybrid motif ALE3EI_0959 IPR001249 Acetyl-CoA biotin carboxyl carrier ALE3EI_0959 IPR001882 Biotin-binding site ALE3EI_0960 IPR016185 Pre-ATP-grasp domain superfamily ALE3EI_0960 IPR011054 Rudiment single hybrid motif ALE3EI_0960 IPR011764 Biotin carboxylation domain ALE3EI_0960 IPR005482 Biotin carboxylase, C-terminal ALE3EI_0960 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain ALE3EI_0960 IPR011761 ATP-grasp fold ALE3EI_0960 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase ALE3EI_0960 IPR005481 Biotin carboxylase-like, N-terminal domain ALE3EI_0962 IPR036950 Penicillin binding protein transglycosylase domain ALE3EI_0962 IPR011812 Biosynthetic peptidoglycan transglycosylase ALE3EI_0962 IPR001264 Glycosyl transferase, family 51 ALE3EI_0962 IPR023346 Lysozyme-like domain superfamily ALE3EI_0965 IPR003593 AAA+ ATPase domain ALE3EI_0965 IPR003439 ABC transporter-like ALE3EI_0965 IPR017871 ABC transporter, conserved site ALE3EI_0965 IPR013611 Transport-associated OB, type 2 ALE3EI_0965 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0965 IPR008995 Molybdate/tungstate binding, C-terminal ALE3EI_0965 IPR015853 ABC transporter, ferric cation import, FbpC ALE3EI_0966 IPR029058 Alpha/Beta hydrolase fold ALE3EI_0966 IPR002470 Peptidase S9A, prolyl oligopeptidase ALE3EI_0966 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ALE3EI_0966 IPR023302 Peptidase S9A, N-terminal domain ALE3EI_0966 IPR002471 Peptidase S9, serine active site ALE3EI_0970 IPR012280 Semialdehyde dehydrogenase, dimerisation domain ALE3EI_0970 IPR012080 Aspartate-semialdehyde dehydrogenase ALE3EI_0970 IPR036291 NAD(P)-binding domain superfamily ALE3EI_0970 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site ALE3EI_0970 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type ALE3EI_0970 IPR000534 Semialdehyde dehydrogenase, NAD-binding ALE3EI_0971 IPR036019 Gated mechanosensitive channel ALE3EI_0971 IPR019823 Large-conductance mechanosensitive channel, conserved site ALE3EI_0971 IPR001185 Large-conductance mechanosensitive channel ALE3EI_0971 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L ALE3EI_0972 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal ALE3EI_0972 IPR011079 Alanine racemase, C-terminal ALE3EI_0972 IPR001608 Alanine racemase, N-terminal ALE3EI_0972 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site ALE3EI_0972 IPR029066 PLP-binding barrel ALE3EI_0972 IPR000821 Alanine racemase ALE3EI_0973 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0973 IPR001267 Thymidine kinase ALE3EI_0975 IPR008189 rRNA small subunit methyltransferase I ALE3EI_0975 IPR018063 SAM-dependent methyltransferase RsmI, conserved site ALE3EI_0975 IPR014776 Tetrapyrrole methylase, subdomain 2 ALE3EI_0975 IPR014777 Tetrapyrrole methylase, subdomain 1 ALE3EI_0975 IPR000878 Tetrapyrrole methylase ALE3EI_0975 IPR035996 Tetrapyrrole methylase superfamily ALE3EI_0976 IPR036895 Uracil-DNA glycosylase-like domain superfamily ALE3EI_0976 IPR005122 Uracil-DNA glycosylase-like ALE3EI_0978 IPR038763 DHH phosphoesterase superfamily ALE3EI_0978 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal ALE3EI_0978 IPR041122 RecJ, OB domain ALE3EI_0978 IPR003156 DHHA1 domain ALE3EI_0978 IPR004610 Bacterial RecJ exonuclease ALE3EI_0978 IPR001667 DDH domain ALE3EI_0979 IPR029052 Metallo-dependent phosphatase-like ALE3EI_0979 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ALE3EI_0979 IPR010138 UDP-2,3-diacylglucosamine hydrolase ALE3EI_0980 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily ALE3EI_0980 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family ALE3EI_0987 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type ALE3EI_0987 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0987 IPR000212 DNA helicase, UvrD/REP type ALE3EI_0988 IPR020586 Photosystem I PsaA/PsaB, conserved site ALE3EI_0988 IPR006664 Outer membrane protein, bacterial ALE3EI_0988 IPR006665 OmpA-like domain ALE3EI_0988 IPR036408 Photosystem I PsaA/PsaB superfamily ALE3EI_0988 IPR001280 Photosystem I PsaA/PsaB ALE3EI_0988 IPR006244 Photosystem I PsaB ALE3EI_0988 IPR036737 OmpA-like domain superfamily ALE3EI_0989 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase ALE3EI_0989 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ALE3EI_0989 IPR004839 Aminotransferase, class I/classII ALE3EI_0989 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_0989 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_0989 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_0990 IPR000212 DNA helicase, UvrD/REP type ALE3EI_0990 IPR014152 DNA helicase subunit AddA ALE3EI_0990 IPR011335 Restriction endonuclease type II-like ALE3EI_0990 IPR034739 UvrD/AddA helicase, N-terminal ALE3EI_0990 IPR011604 Exonuclease, phage-type/RecB, C-terminal ALE3EI_0990 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_0990 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type ALE3EI_0990 IPR014017 UvrD-like DNA helicase, C-terminal ALE3EI_0990 IPR014016 UvrD-like helicase, ATP-binding domain ALE3EI_0991 IPR001189 Manganese/iron superoxide dismutase ALE3EI_0991 IPR019833 Manganese/iron superoxide dismutase, binding site ALE3EI_0991 IPR019831 Manganese/iron superoxide dismutase, N-terminal ALE3EI_0991 IPR019832 Manganese/iron superoxide dismutase, C-terminal ALE3EI_0991 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily ALE3EI_0991 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily ALE3EI_0997 IPR000836 Phosphoribosyltransferase domain ALE3EI_0997 IPR029055 Nucleophile aminohydrolases, N-terminal ALE3EI_0997 IPR029057 Phosphoribosyltransferase-like ALE3EI_0997 IPR035584 Amidophosphoribosyltransferase, N-terminal ALE3EI_0997 IPR017932 Glutamine amidotransferase type 2 domain ALE3EI_0997 IPR005854 Amidophosphoribosyltransferase ALE3EI_0999 IPR037056 Ribonuclease H1, N-terminal domain superfamily ALE3EI_0999 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ALE3EI_0999 IPR011320 Ribonuclease H1, N-terminal ALE3EI_0999 IPR017290 Ribonuclease H, Bacteroides-type ALE3EI_0999 IPR012337 Ribonuclease H-like superfamily ALE3EI_0999 IPR036397 Ribonuclease H superfamily ALE3EI_1000 IPR004607 Phosphoribosylglycinamide formyltransferase ALE3EI_1000 IPR036477 Formyl transferase, N-terminal domain superfamily ALE3EI_1000 IPR002376 Formyl transferase, N-terminal ALE3EI_1001 IPR036736 ACP-like superfamily ALE3EI_1001 IPR003231 Acyl carrier protein (ACP) ALE3EI_1001 IPR009081 Phosphopantetheine binding ACP domain ALE3EI_1001 IPR006162 Phosphopantetheine attachment site ALE3EI_1002 IPR014031 Beta-ketoacyl synthase, C-terminal ALE3EI_1002 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ALE3EI_1002 IPR000794 Beta-ketoacyl synthase ALE3EI_1002 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 ALE3EI_1002 IPR016039 Thiolase-like ALE3EI_1002 IPR014030 Beta-ketoacyl synthase, N-terminal ALE3EI_1002 IPR018201 Beta-ketoacyl synthase, active site ALE3EI_1003 IPR014720 Double-stranded RNA-binding domain ALE3EI_1003 IPR036389 Ribonuclease III, endonuclease domain superfamily ALE3EI_1003 IPR000999 Ribonuclease III domain ALE3EI_1003 IPR011907 Ribonuclease III ALE3EI_1005 IPR015806 Pyruvate kinase, insert domain superfamily ALE3EI_1005 IPR036637 Phosphohistidine domain superfamily ALE3EI_1005 IPR001697 Pyruvate kinase ALE3EI_1005 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ALE3EI_1005 IPR040442 Pyruvate kinase-like domain superfamily ALE3EI_1005 IPR011037 Pyruvate kinase-like, insert domain superfamily ALE3EI_1005 IPR018209 Pyruvate kinase, active site ALE3EI_1005 IPR015793 Pyruvate kinase, barrel ALE3EI_1005 IPR015795 Pyruvate kinase, C-terminal ALE3EI_1005 IPR008279 PEP-utilising enzyme, mobile domain ALE3EI_1005 IPR036918 Pyruvate kinase, C-terminal domain superfamily ALE3EI_1007 IPR017961 DNA polymerase, Y-family, little finger domain ALE3EI_1007 IPR022880 DNA polymerase IV ALE3EI_1007 IPR001126 UmuC domain ALE3EI_1007 IPR036775 DNA polymerase, Y-family, little finger domain superfamily ALE3EI_1008 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like ALE3EI_1008 IPR033469 CYTH-like domain superfamily ALE3EI_1008 IPR023577 CYTH domain ALE3EI_1010 IPR036822 Copper homeostasis (CutC) domain superfamily ALE3EI_1010 IPR023648 Copper homeostasis CutC domain ALE3EI_1010 IPR005627 Copper homeostasis protein CutC ALE3EI_1011 IPR025705 Beta-hexosaminidase ALE3EI_1011 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal ALE3EI_1011 IPR037524 PA14/GLEYA domain ALE3EI_1011 IPR029018 Beta-hexosaminidase-like, domain 2 ALE3EI_1011 IPR017853 Glycoside hydrolase superfamily ALE3EI_1011 IPR011658 PA14 domain ALE3EI_1011 IPR015883 Glycoside hydrolase family 20, catalytic domain ALE3EI_1012 IPR008979 Galactose-binding-like domain superfamily ALE3EI_1012 IPR023230 Glycoside hydrolase, family 2, conserved site ALE3EI_1012 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich ALE3EI_1012 IPR006101 Glycoside hydrolase, family 2 ALE3EI_1012 IPR006104 Glycosyl hydrolases family 2, sugar binding domain ALE3EI_1012 IPR017853 Glycoside hydrolase superfamily ALE3EI_1012 IPR023232 Glycoside hydrolase, family 2, active site ALE3EI_1012 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily ALE3EI_1012 IPR013783 Immunoglobulin-like fold ALE3EI_1012 IPR040605 Glycoside hydrolase family 2, domain 5 ALE3EI_1012 IPR008964 Invasin/intimin cell-adhesion fragments ALE3EI_1012 IPR032311 Domain of unknown function DUF4982 ALE3EI_1012 IPR006103 Glycoside hydrolase family 2, catalytic domain ALE3EI_1013 IPR001460 Penicillin-binding protein, transpeptidase ALE3EI_1013 IPR012338 Beta-lactamase/transpeptidase-like ALE3EI_1013 IPR001264 Glycosyl transferase, family 51 ALE3EI_1013 IPR036950 Penicillin binding protein transglycosylase domain ALE3EI_1013 IPR009647 Penicillin-binding, C-terminal ALE3EI_1013 IPR011815 Penicillin-binding protein 1C ALE3EI_1013 IPR023346 Lysozyme-like domain superfamily ALE3EI_1014 IPR021868 Alpha-2-macroglobulin MG3 domain ALE3EI_1014 IPR011625 Alpha-2-macroglobulin, bait region domain ALE3EI_1014 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid ALE3EI_1014 IPR002890 Macroglobulin domain ALE3EI_1014 IPR001599 Alpha-2-macroglobulin ALE3EI_1014 IPR001434 Domain of unknown function DUF11 ALE3EI_1014 IPR041246 Bacterial alpha-2-macroglobulin MG10 domain ALE3EI_1014 IPR041462 Bacterial Alpha-2-macroglobulin, MG6 domain ALE3EI_1014 IPR041203 Bacterial Alpha-2-macroglobulin, MG5 domain ALE3EI_1015 IPR007138 Antibiotic biosynthesis monooxygenase domain ALE3EI_1015 IPR011008 Dimeric alpha-beta barrel ALE3EI_1016 IPR000246 Peptidase T2, asparaginase 2 ALE3EI_1016 IPR029055 Nucleophile aminohydrolases, N-terminal ALE3EI_1018 IPR011051 RmlC-like cupin domain superfamily ALE3EI_1018 IPR014710 RmlC-like jelly roll fold ALE3EI_1018 IPR010329 3-hydroxyanthranilic acid dioxygenase ALE3EI_1019 IPR016161 Aldehyde/histidinol dehydrogenase ALE3EI_1019 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria ALE3EI_1019 IPR010061 Methylmalonate-semialdehyde dehydrogenase ALE3EI_1019 IPR015590 Aldehyde dehydrogenase domain ALE3EI_1019 IPR016162 Aldehyde dehydrogenase, N-terminal ALE3EI_1019 IPR016160 Aldehyde dehydrogenase, cysteine active site ALE3EI_1019 IPR016163 Aldehyde dehydrogenase, C-terminal ALE3EI_1021 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ALE3EI_1021 IPR029052 Metallo-dependent phosphatase-like ALE3EI_1021 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ALE3EI_1023 IPR036013 Band 7/SPFH domain superfamily ALE3EI_1023 IPR033880 SPFH domain, YdjI-like ALE3EI_1026 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1026 IPR020904 Short-chain dehydrogenase/reductase, conserved site ALE3EI_1026 IPR002347 Short-chain dehydrogenase/reductase SDR ALE3EI_1029 IPR041628 ChlI/MoxR, AAA lid domain ALE3EI_1029 IPR011703 ATPase, AAA-3 ALE3EI_1029 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1030 IPR002881 Domain of unknown function DUF58 ALE3EI_1030 IPR036465 von Willebrand factor A-like domain superfamily ALE3EI_1032 IPR002035 von Willebrand factor, type A ALE3EI_1032 IPR022933 Uncharacterised protein family UPF0353 ALE3EI_1032 IPR036465 von Willebrand factor A-like domain superfamily ALE3EI_1033 IPR024163 Aerotolerance regulator, N-terminal ALE3EI_1033 IPR022933 Uncharacterised protein family UPF0353 ALE3EI_1033 IPR002035 von Willebrand factor, type A ALE3EI_1033 IPR036465 von Willebrand factor A-like domain superfamily ALE3EI_1039 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit ALE3EI_1039 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial ALE3EI_1039 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal ALE3EI_1039 IPR006195 Aminoacyl-tRNA synthetase, class II ALE3EI_1039 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm ALE3EI_1039 IPR002319 Phenylalanyl-tRNA synthetase ALE3EI_1041 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ALE3EI_1041 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ALE3EI_1041 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent ALE3EI_1041 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal ALE3EI_1041 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1041 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal ALE3EI_1043 IPR004821 Cytidyltransferase-like domain ALE3EI_1043 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_1043 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase ALE3EI_1044 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ALE3EI_1044 IPR008144 Guanylate kinase-like domain ALE3EI_1044 IPR017665 Guanylate kinase ALE3EI_1044 IPR020590 Guanylate kinase, conserved site ALE3EI_1044 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1045 IPR005229 Conserved hypothetical protein CHP00255 ALE3EI_1045 IPR013527 YicC-like, N-terminal ALE3EI_1045 IPR013551 Domain of unknown function DUF1732 ALE3EI_1052 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_1052 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_1052 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme ALE3EI_1052 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_1053 IPR010559 Signal transduction histidine kinase, internal region ALE3EI_1053 IPR003018 GAF domain ALE3EI_1053 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1053 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region ALE3EI_1054 IPR011006 CheY-like superfamily ALE3EI_1054 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_1054 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_1054 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1054 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_1057 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1057 IPR014362 Glutamate dehydrogenase ALE3EI_1057 IPR033524 Leu/Phe/Val dehydrogenases active site ALE3EI_1057 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal ALE3EI_1057 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase ALE3EI_1057 IPR033922 NAD(P) binding domain of glutamate dehydrogenase ALE3EI_1057 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain ALE3EI_1059 IPR022572 DNA replication/recombination mediator RecO, N-terminal ALE3EI_1059 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1059 IPR037278 ARFGAP/RecO-like zinc finger ALE3EI_1059 IPR003717 Recombination protein O, RecO ALE3EI_1060 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_1060 IPR012910 TonB-dependent receptor, plug domain ALE3EI_1060 IPR010916 TonB box, conserved site ALE3EI_1060 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ALE3EI_1060 IPR010917 TonB-dependent receptor, conserved site ALE3EI_1060 IPR039426 Vitamin B12 transporter BtuB-like ALE3EI_1060 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_1061 IPR011904 Acetate-CoA ligase ALE3EI_1061 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain ALE3EI_1061 IPR042099 AMP-dependent synthetase-like superfamily ALE3EI_1061 IPR025110 AMP-binding enzyme, C-terminal domain ALE3EI_1061 IPR020845 AMP-binding, conserved site ALE3EI_1061 IPR000873 AMP-dependent synthetase/ligase ALE3EI_1067 IPR011008 Dimeric alpha-beta barrel ALE3EI_1067 IPR009874 Protein of unknown function DUF1428 ALE3EI_1069 IPR001387 Cro/C1-type helix-turn-helix domain ALE3EI_1069 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ALE3EI_1071 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1071 IPR000424 Primosome PriB/single-strand DNA-binding ALE3EI_1071 IPR011344 Single-stranded DNA-binding protein ALE3EI_1072 IPR015413 Methionyl/Leucyl tRNA synthetase ALE3EI_1072 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ALE3EI_1072 IPR023458 Methionine-tRNA ligase, type 1 ALE3EI_1072 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ALE3EI_1072 IPR002547 tRNA-binding domain ALE3EI_1072 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_1072 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal ALE3EI_1072 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding ALE3EI_1072 IPR033911 Methioninyl-tRNA synthetase core domain ALE3EI_1072 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain ALE3EI_1072 IPR029038 Methionyl-tRNA synthetase, Zn-domain ALE3EI_1072 IPR014758 Methionyl-tRNA synthetase ALE3EI_1072 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1074 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal ALE3EI_1074 IPR040921 LD-carboxypeptidase, C-terminal ALE3EI_1074 IPR040449 LD-carboxypeptidase, N-terminal ALE3EI_1074 IPR029062 Class I glutamine amidotransferase-like ALE3EI_1074 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily ALE3EI_1074 IPR003507 Peptidase family S66 ALE3EI_1075 IPR011335 Restriction endonuclease type II-like ALE3EI_1075 IPR011856 tRNA endonuclease-like domain superfamily ALE3EI_1075 IPR003509 Uncharacterised protein family UPF0102 ALE3EI_1076 IPR001650 Helicase, C-terminal ALE3EI_1076 IPR036101 CarD-like/TRCF domain superfamily ALE3EI_1076 IPR041471 UvrB, interaction domain ALE3EI_1076 IPR004576 Transcription-repair coupling factor ALE3EI_1076 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_1076 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1076 IPR037235 TRCF-like, C-terminal domain ALE3EI_1076 IPR005118 Transcription-repair-coupling factor, C-terminal domain ALE3EI_1076 IPR003711 CarD-like/TRCF domain ALE3EI_1076 IPR011545 DEAD/DEAH box helicase domain ALE3EI_1077 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily ALE3EI_1077 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALE3EI_1077 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_1078 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_1078 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_1078 IPR000192 Aminotransferase class V domain ALE3EI_1078 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ALE3EI_1078 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_1081 IPR001650 Helicase, C-terminal ALE3EI_1081 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_1081 IPR003593 AAA+ ATPase domain ALE3EI_1081 IPR013701 DEAD/H associated ALE3EI_1081 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1081 IPR011545 DEAD/DEAH box helicase domain ALE3EI_1082 IPR012310 DNA ligase, ATP-dependent, central ALE3EI_1085 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal ALE3EI_1085 IPR000146 Fructose-1,6-bisphosphatase class 1 ALE3EI_1085 IPR028343 Fructose-1,6-bisphosphatase ALE3EI_1085 IPR020548 Fructose-1,6-bisphosphatase, active site ALE3EI_1087 IPR001048 Aspartate/glutamate/uridylate kinase ALE3EI_1087 IPR005260 Aspartate kinase, monofunctional class ALE3EI_1087 IPR001341 Aspartate kinase ALE3EI_1087 IPR018042 Aspartate kinase, conserved site ALE3EI_1087 IPR002912 ACT domain ALE3EI_1087 IPR036393 Acetylglutamate kinase-like superfamily ALE3EI_1087 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain ALE3EI_1089 IPR019264 Domain of unknown function DUF2179 ALE3EI_1089 IPR003740 Uncharacterised membrane protein YitT ALE3EI_1089 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ALE3EI_1091 IPR018060 DNA binding HTH domain, AraC-type ALE3EI_1091 IPR037923 Transcription regulator HTH-like ALE3EI_1091 IPR009057 Homeobox-like domain superfamily ALE3EI_1091 IPR020449 Transcription regulator HTH, AraC- type ALE3EI_1091 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like ALE3EI_1094 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ALE3EI_1094 IPR001279 Metallo-beta-lactamase ALE3EI_1094 IPR011842 Coenzyme PQQ biosynthesis protein B ALE3EI_1099 IPR003660 HAMP domain ALE3EI_1099 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase ALE3EI_1099 IPR029787 Nucleotide cyclase ALE3EI_1100 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1100 IPR037522 HD-GYP domain ALE3EI_1100 IPR003607 HD/PDEase domain ALE3EI_1100 IPR011006 CheY-like superfamily ALE3EI_1100 IPR006674 HD domain ALE3EI_1101 IPR005467 Histidine kinase domain ALE3EI_1101 IPR013655 PAS fold-3 ALE3EI_1101 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_1101 IPR035965 PAS domain superfamily ALE3EI_1101 IPR000700 PAS-associated, C-terminal ALE3EI_1101 IPR000014 PAS domain ALE3EI_1101 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_1101 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_1101 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1101 IPR001610 PAC motif ALE3EI_1101 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_1101 IPR013656 PAS fold-4 ALE3EI_1102 IPR035965 PAS domain superfamily ALE3EI_1102 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_1102 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_1102 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_1102 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1102 IPR005467 Histidine kinase domain ALE3EI_1102 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_1102 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1102 IPR001610 PAC motif ALE3EI_1102 IPR000014 PAS domain ALE3EI_1102 IPR011006 CheY-like superfamily ALE3EI_1102 IPR000700 PAS-associated, C-terminal ALE3EI_1108 IPR023485 Phosphotyrosine protein phosphatase I ALE3EI_1108 IPR014064 Arsenate reductase ArsC ALE3EI_1108 IPR036196 Phosphotyrosine protein phosphatase I superfamily ALE3EI_1109 IPR016181 Acyl-CoA N-acyltransferase ALE3EI_1109 IPR000182 GNAT domain ALE3EI_1111 IPR011991 ArsR-like helix-turn-helix domain ALE3EI_1111 IPR001845 HTH ArsR-type DNA-binding domain ALE3EI_1111 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_1111 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_1113 IPR025870 Glyoxalase-like domain ALE3EI_1113 IPR037523 Vicinal oxygen chelate (VOC) domain ALE3EI_1113 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ALE3EI_1114 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALE3EI_1114 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ALE3EI_1114 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ALE3EI_1114 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1116 IPR006667 SLC41 divalent cation transporters, integral membrane domain ALE3EI_1116 IPR038048 Magnesium transporter MgtE, transmembrane domain ALE3EI_1116 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily ALE3EI_1116 IPR038076 MgtE, N-terminal domain superfamily ALE3EI_1116 IPR006668 Magnesium transporter, MgtE intracellular domain ALE3EI_1116 IPR000644 CBS domain ALE3EI_1116 IPR006669 Magnesium transporter MgtE ALE3EI_1117 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal ALE3EI_1117 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ALE3EI_1117 IPR023165 rRNA adenine dimethylase-like ALE3EI_1117 IPR011530 Ribosomal RNA adenine dimethylase ALE3EI_1117 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_1121 IPR015866 Serine-tRNA synthetase, type1, N-terminal ALE3EI_1121 IPR006195 Aminoacyl-tRNA synthetase, class II ALE3EI_1121 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) ALE3EI_1121 IPR002317 Serine-tRNA ligase, type1 ALE3EI_1121 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily ALE3EI_1121 IPR033729 Serine-tRNA ligase catalytic core domain ALE3EI_1121 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm ALE3EI_1123 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_1123 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic ALE3EI_1123 IPR023465 Riboflavin kinase domain superfamily ALE3EI_1123 IPR002606 Riboflavin kinase, bacterial ALE3EI_1123 IPR023468 Riboflavin kinase ALE3EI_1123 IPR015864 FAD synthetase ALE3EI_1124 IPR036416 Peptidyl-tRNA hydrolase superfamily ALE3EI_1124 IPR018171 Peptidyl-tRNA hydrolase, conserved site ALE3EI_1124 IPR001328 Peptidyl-tRNA hydrolase ALE3EI_1125 IPR029751 Ribosomal protein L25 ALE3EI_1125 IPR001021 Ribosomal protein L25, long-form ALE3EI_1125 IPR037121 Ribosomal protein L25, C-terminal ALE3EI_1125 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal ALE3EI_1125 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily ALE3EI_1125 IPR020057 Ribosomal protein L25, beta domain ALE3EI_1126 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain ALE3EI_1126 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type ALE3EI_1126 IPR005946 Ribose-phosphate pyrophosphokinase ALE3EI_1126 IPR029057 Phosphoribosyltransferase-like ALE3EI_1126 IPR000836 Phosphoribosyltransferase domain ALE3EI_1126 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site ALE3EI_1130 IPR036034 PDZ superfamily ALE3EI_1130 IPR004447 C-terminal-processing peptidase S41A ALE3EI_1130 IPR005151 Tail specific protease ALE3EI_1130 IPR001478 PDZ domain ALE3EI_1130 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_1132 IPR002771 Multiple antibiotic resistance (MarC)-related ALE3EI_1136 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal ALE3EI_1136 IPR013509 Ribonucleotide reductase large subunit, N-terminal ALE3EI_1136 IPR000788 Ribonucleotide reductase large subunit, C-terminal ALE3EI_1136 IPR013346 Ribonucleotide reductase, class I , alpha subunit ALE3EI_1136 IPR005144 ATP-cone domain ALE3EI_1136 IPR039718 Ribonucleoside-diphosphate reductase large subunit ALE3EI_1144 IPR001902 SLC26A/SulP transporter ALE3EI_1144 IPR002645 STAS domain ALE3EI_1144 IPR011547 SLC26A/SulP transporter domain ALE3EI_1144 IPR036513 STAS domain superfamily ALE3EI_1145 IPR036874 Carbonic anhydrase superfamily ALE3EI_1145 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site ALE3EI_1145 IPR001765 Carbonic anhydrase ALE3EI_1147 IPR012910 TonB-dependent receptor, plug domain ALE3EI_1147 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_1147 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site ALE3EI_1147 IPR023996 TonB-dependent outer membrane protein, SusC/RagA ALE3EI_1147 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_1147 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ALE3EI_1149 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal ALE3EI_1149 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily ALE3EI_1149 IPR006674 HD domain ALE3EI_1149 IPR026875 Phosphohydrolase-associated domain ALE3EI_1149 IPR003607 HD/PDEase domain ALE3EI_1149 IPR006261 dNTP triphosphohydrolase ALE3EI_1149 IPR023024 dNTP triphosphohydrolase, type 3 ALE3EI_1150 IPR020826 Transketolase binding site ALE3EI_1150 IPR005475 Transketolase-like, pyrimidine-binding domain ALE3EI_1150 IPR005477 Deoxyxylulose-5-phosphate synthase ALE3EI_1150 IPR005474 Transketolase, N-terminal ALE3EI_1150 IPR029061 Thiamin diphosphate-binding fold ALE3EI_1150 IPR033248 Transketolase, C-terminal domain ALE3EI_1150 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ALE3EI_1151 IPR016192 APOBEC/CMP deaminase, zinc-binding ALE3EI_1151 IPR002125 Cytidine and deoxycytidylate deaminase domain ALE3EI_1151 IPR028883 tRNA-specific adenosine deaminase ALE3EI_1151 IPR016193 Cytidine deaminase-like ALE3EI_1152 IPR002059 Cold-shock protein, DNA-binding ALE3EI_1152 IPR012156 Cold shock, CspA ALE3EI_1152 IPR019844 Cold-shock (CSD) domain ALE3EI_1152 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1152 IPR011129 Cold shock domain ALE3EI_1154 IPR014743 Chloride channel, core ALE3EI_1154 IPR001807 Chloride channel, voltage gated ALE3EI_1154 IPR023861 Chloride channel, ClcA ALE3EI_1155 IPR006195 Aminoacyl-tRNA synthetase, class II ALE3EI_1155 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) ALE3EI_1155 IPR004524 Aspartate-tRNA ligase, type 1 ALE3EI_1155 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb ALE3EI_1155 IPR004115 GAD-like domain superfamily ALE3EI_1155 IPR029351 GAD domain ALE3EI_1155 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ALE3EI_1155 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1156 IPR012910 TonB-dependent receptor, plug domain ALE3EI_1156 IPR023996 TonB-dependent outer membrane protein, SusC/RagA ALE3EI_1156 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site ALE3EI_1156 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_1156 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ALE3EI_1156 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_1158 IPR001036 Acriflavin resistance protein ALE3EI_1158 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALE3EI_1159 IPR006143 RND efflux pump, membrane fusion protein ALE3EI_1159 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALE3EI_1159 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB ALE3EI_1161 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ALE3EI_1161 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ALE3EI_1161 IPR009057 Homeobox-like domain superfamily ALE3EI_1161 IPR001647 DNA-binding HTH domain, TetR-type ALE3EI_1161 IPR013572 Transcription regulator MAATS, C-terminal ALE3EI_1162 IPR008949 Isoprenoid synthase domain superfamily ALE3EI_1162 IPR000092 Polyprenyl synthetase ALE3EI_1162 IPR033749 Polyprenyl synthetase, conserved site ALE3EI_1164 IPR005475 Transketolase-like, pyrimidine-binding domain ALE3EI_1164 IPR029061 Thiamin diphosphate-binding fold ALE3EI_1164 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily ALE3EI_1164 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal ALE3EI_1164 IPR001017 Dehydrogenase, E1 component ALE3EI_1164 IPR011603 2-oxoglutarate dehydrogenase E1 component ALE3EI_1164 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain ALE3EI_1165 IPR011053 Single hybrid motif ALE3EI_1165 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALE3EI_1165 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain ALE3EI_1165 IPR000089 Biotin/lipoyl attachment ALE3EI_1165 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ALE3EI_1165 IPR036625 E3-binding domain superfamily ALE3EI_1165 IPR004167 Peripheral subunit-binding domain ALE3EI_1165 IPR006255 Dihydrolipoamide succinyltransferase ALE3EI_1166 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1166 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_1166 IPR011006 CheY-like superfamily ALE3EI_1166 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_1167 IPR008595 Sensor DegS ALE3EI_1167 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_1167 IPR016381 Signal transduction histidine kinase, DegS ALE3EI_1167 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ALE3EI_1167 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1167 IPR005467 Histidine kinase domain ALE3EI_1169 IPR001130 TatD family ALE3EI_1169 IPR015991 Uncharacterised hydrolase TatD-type ALE3EI_1169 IPR018228 Deoxyribonuclease, TatD-related, conserved site ALE3EI_1169 IPR032466 Metal-dependent hydrolase ALE3EI_1170 IPR027475 Asparaginase/glutaminase, active site 2 ALE3EI_1170 IPR020827 Asparaginase/glutaminase, active site 1 ALE3EI_1170 IPR041725 Type I (cytosolic) L-asparaginase ALE3EI_1170 IPR037152 L-asparaginase, N-terminal domain superfamily ALE3EI_1170 IPR006034 Asparaginase/glutaminase-like ALE3EI_1170 IPR040919 Asparaginase/glutaminase, C-terminal ALE3EI_1170 IPR027473 L-asparaginase, C-terminal ALE3EI_1170 IPR036152 Asparaginase/glutaminase-like superfamily ALE3EI_1170 IPR006033 Type I L-asparaginase family ALE3EI_1170 IPR027474 L-asparaginase, N-terminal ALE3EI_1172 IPR002898 MotA/TolQ/ExbB proton channel ALE3EI_1178 IPR007046 RNA polymerase sigma factor 54, core-binding domain ALE3EI_1178 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily ALE3EI_1178 IPR007634 RNA polymerase sigma factor 54, DNA-binding ALE3EI_1178 IPR000394 RNA polymerase sigma factor 54 ALE3EI_1179 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ALE3EI_1179 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1179 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb ALE3EI_1179 IPR004522 Asparagine-tRNA ligase ALE3EI_1179 IPR006195 Aminoacyl-tRNA synthetase, class II ALE3EI_1179 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) ALE3EI_1182 IPR036191 RRF superfamily ALE3EI_1182 IPR023584 Ribosome recycling factor domain ALE3EI_1182 IPR002661 Ribosome recycling factor ALE3EI_1183 IPR036393 Acetylglutamate kinase-like superfamily ALE3EI_1183 IPR001048 Aspartate/glutamate/uridylate kinase ALE3EI_1183 IPR015963 Uridylate kinase, bacteria ALE3EI_1183 IPR011817 Uridylate kinase ALE3EI_1184 IPR001816 Translation elongation factor EFTs/EF1B ALE3EI_1184 IPR009060 UBA-like superfamily ALE3EI_1184 IPR018101 Translation elongation factor Ts, conserved site ALE3EI_1184 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation ALE3EI_1184 IPR036402 Elongation factor Ts, dimerisation domain superfamily ALE3EI_1185 IPR001865 Ribosomal protein S2 ALE3EI_1185 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily ALE3EI_1185 IPR018130 Ribosomal protein S2, conserved site ALE3EI_1185 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid ALE3EI_1186 IPR000754 Ribosomal protein S9 ALE3EI_1186 IPR023035 Ribosomal protein S9, bacterial/plastid ALE3EI_1186 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_1186 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALE3EI_1187 IPR005822 Ribosomal protein L13 ALE3EI_1187 IPR036899 Ribosomal protein L13 superfamily ALE3EI_1187 IPR023563 Ribosomal protein L13, conserved site ALE3EI_1187 IPR005823 Ribosomal protein L13, bacterial-type ALE3EI_1190 IPR019760 DNA-directed DNA polymerase, family A, conserved site ALE3EI_1190 IPR002562 3'-5' exonuclease domain ALE3EI_1190 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal ALE3EI_1190 IPR002421 5'-3' exonuclease, N-terminal ALE3EI_1190 IPR036279 5'-3' exonuclease, C-terminal domain superfamily ALE3EI_1190 IPR002298 DNA polymerase A ALE3EI_1190 IPR036397 Ribonuclease H superfamily ALE3EI_1190 IPR012337 Ribonuclease H-like superfamily ALE3EI_1190 IPR008918 Helix-hairpin-helix motif, class 2 ALE3EI_1190 IPR018320 DNA polymerase 1 ALE3EI_1190 IPR029060 PIN-like domain superfamily ALE3EI_1190 IPR001098 DNA-directed DNA polymerase, family A, palm domain ALE3EI_1190 IPR020045 DNA polymerase I-like, H3TH domain ALE3EI_1192 IPR005561 ANTAR domain ALE3EI_1192 IPR011006 CheY-like superfamily ALE3EI_1192 IPR008327 Signal transduction response regulator, antiterminator ALE3EI_1192 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1192 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_1193 IPR000014 PAS domain ALE3EI_1193 IPR000700 PAS-associated, C-terminal ALE3EI_1193 IPR035965 PAS domain superfamily ALE3EI_1193 IPR005467 Histidine kinase domain ALE3EI_1193 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1193 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_1193 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain ALE3EI_1193 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_1194 IPR036909 Cytochrome c-like domain superfamily ALE3EI_1194 IPR009056 Cytochrome c-like domain ALE3EI_1194 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily ALE3EI_1194 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding ALE3EI_1194 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily ALE3EI_1194 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead ALE3EI_1196 IPR000246 Peptidase T2, asparaginase 2 ALE3EI_1196 IPR029055 Nucleophile aminohydrolases, N-terminal ALE3EI_1197 IPR029062 Class I glutamine amidotransferase-like ALE3EI_1197 IPR011811 Peptidase S51, cyanophycinase ALE3EI_1197 IPR005320 Peptidase S51 ALE3EI_1198 IPR011761 ATP-grasp fold ALE3EI_1198 IPR013221 Mur ligase, central ALE3EI_1198 IPR036615 Mur ligase, C-terminal domain superfamily ALE3EI_1198 IPR004101 Mur ligase, C-terminal ALE3EI_1198 IPR036565 Mur-like, catalytic domain superfamily ALE3EI_1198 IPR011810 Cyanophycin synthetase ALE3EI_1198 IPR013651 ATP-grasp fold, RimK-type ALE3EI_1200 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1200 IPR011006 CheY-like superfamily ALE3EI_1200 IPR007492 LytTR DNA-binding domain ALE3EI_1201 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain ALE3EI_1201 IPR000700 PAS-associated, C-terminal ALE3EI_1201 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_1201 IPR000014 PAS domain ALE3EI_1201 IPR035965 PAS domain superfamily ALE3EI_1201 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_1201 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1201 IPR005467 Histidine kinase domain ALE3EI_1202 IPR036259 MFS transporter superfamily ALE3EI_1202 IPR005964 Bacterial glucose/galactose transporter ALE3EI_1202 IPR011701 Major facilitator superfamily ALE3EI_1203 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ALE3EI_1203 IPR029055 Nucleophile aminohydrolases, N-terminal ALE3EI_1203 IPR000246 Peptidase T2, asparaginase 2 ALE3EI_1204 IPR008928 Six-hairpin glycosidase superfamily ALE3EI_1204 IPR005887 Alpha-1,2-mannosidase, putative ALE3EI_1204 IPR014718 Glycoside hydrolase-type carbohydrate-binding ALE3EI_1204 IPR041371 Glycosyl hydrolase family 92 N-terminal domain ALE3EI_1204 IPR012939 Glycosyl hydrolase family 92 ALE3EI_1205 IPR006311 Twin-arginine translocation pathway, signal sequence ALE3EI_1205 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ALE3EI_1205 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ALE3EI_1205 IPR029052 Metallo-dependent phosphatase-like ALE3EI_1206 IPR005746 Thioredoxin ALE3EI_1206 IPR036249 Thioredoxin-like superfamily ALE3EI_1206 IPR017937 Thioredoxin, conserved site ALE3EI_1206 IPR013766 Thioredoxin domain ALE3EI_1210 IPR014132 Sporulation polysaccharide deacetylase, PdaB ALE3EI_1210 IPR002509 NodB homology domain ALE3EI_1210 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ALE3EI_1213 IPR033856 Flavin-dependent tryptophan halogenase ALE3EI_1213 IPR006905 Flavin-dependent halogenase ALE3EI_1213 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_1214 IPR001106 Aromatic amino acid lyase ALE3EI_1214 IPR024083 Fumarase/histidase, N-terminal ALE3EI_1214 IPR008948 L-Aspartase-like ALE3EI_1214 IPR022313 Phenylalanine/histidine ammonia-lyases, active site ALE3EI_1215 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ALE3EI_1215 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1215 IPR002347 Short-chain dehydrogenase/reductase SDR ALE3EI_1217 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ ALE3EI_1217 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ ALE3EI_1217 IPR029069 HotDog domain superfamily ALE3EI_1222 IPR006162 Phosphopantetheine attachment site ALE3EI_1222 IPR036736 ACP-like superfamily ALE3EI_1222 IPR009081 Phosphopantetheine binding ACP domain ALE3EI_1222 IPR003231 Acyl carrier protein (ACP) ALE3EI_1223 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 ALE3EI_1223 IPR000794 Beta-ketoacyl synthase ALE3EI_1223 IPR018201 Beta-ketoacyl synthase, active site ALE3EI_1223 IPR016039 Thiolase-like ALE3EI_1223 IPR014031 Beta-ketoacyl synthase, C-terminal ALE3EI_1223 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ALE3EI_1223 IPR014030 Beta-ketoacyl synthase, N-terminal ALE3EI_1225 IPR040802 Peptidoglycan GlcNAc deacetylase, N-terminal ALE3EI_1225 IPR017219 Peptidoglycan GlcNAc deacetylase ALE3EI_1225 IPR002509 NodB homology domain ALE3EI_1225 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ALE3EI_1227 IPR029069 HotDog domain superfamily ALE3EI_1227 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ ALE3EI_1227 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ ALE3EI_1228 IPR001173 Glycosyltransferase 2-like ALE3EI_1228 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase ALE3EI_1228 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_1232 IPR011880 Phenylacetate-CoA ligase ALE3EI_1232 IPR042099 AMP-dependent synthetase-like superfamily ALE3EI_1232 IPR000873 AMP-dependent synthetase/ligase ALE3EI_1232 IPR028154 AMP-dependent ligase, C-terminal ALE3EI_1234 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_1234 IPR006015 Universal stress protein A family ALE3EI_1234 IPR006016 UspA ALE3EI_1235 IPR003728 Ribosome maturation factor RimP ALE3EI_1235 IPR035956 RimP, N-terminal domain superfamily ALE3EI_1235 IPR028989 Ribosome maturation factor RimP, N-terminal ALE3EI_1236 IPR010214 Transcription termination factor NusA, C-terminal duplication ALE3EI_1236 IPR030842 Transcription termination/antitermination protein NusA, bacterial ALE3EI_1236 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1236 IPR022967 RNA-binding domain, S1 ALE3EI_1236 IPR003029 S1 domain ALE3EI_1236 IPR013735 Transcription factor NusA, N-terminal ALE3EI_1236 IPR009019 K homology domain superfamily, prokaryotic type ALE3EI_1236 IPR025249 KH domain, NusA-like ALE3EI_1236 IPR010213 Transcription termination factor NusA ALE3EI_1236 IPR004087 K Homology domain ALE3EI_1236 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical ALE3EI_1236 IPR015946 K homology domain-like, alpha/beta ALE3EI_1236 IPR036555 NusA, N-terminal domain superfamily ALE3EI_1237 IPR005225 Small GTP-binding protein domain ALE3EI_1237 IPR009000 Translation protein, beta-barrel domain superfamily ALE3EI_1237 IPR000795 Transcription factor, GTP-binding domain ALE3EI_1237 IPR000178 Translation initiation factor aIF-2, bacterial-like ALE3EI_1237 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ALE3EI_1237 IPR006847 Translation initiation factor IF-2, N-terminal ALE3EI_1237 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1237 IPR015760 Translation initiation factor IF- 2 ALE3EI_1237 IPR023115 Translation initiation factor IF- 2, domain 3 ALE3EI_1240 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALE3EI_1240 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALE3EI_1241 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily ALE3EI_1241 IPR001865 Ribosomal protein S2 ALE3EI_1241 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid ALE3EI_1241 IPR018130 Ribosomal protein S2, conserved site ALE3EI_1245 IPR006333 Cytochrome o ubiquinol oxidase subunit II ALE3EI_1245 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily ALE3EI_1245 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain ALE3EI_1245 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain ALE3EI_1245 IPR008972 Cupredoxin ALE3EI_1245 IPR010514 COX aromatic rich motif ALE3EI_1245 IPR002429 Cytochrome c oxidase subunit II-like C-terminal ALE3EI_1246 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site ALE3EI_1246 IPR000883 Cytochrome c oxidase subunit I ALE3EI_1246 IPR036927 Cytochrome c oxidase-like, subunit I superfamily ALE3EI_1246 IPR023616 Cytochrome c oxidase-like, subunit I domain ALE3EI_1247 IPR002528 Multi antimicrobial extrusion protein ALE3EI_1249 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_1249 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_1249 IPR003593 AAA+ ATPase domain ALE3EI_1249 IPR004605 DNA helicase, Holliday junction RuvB-type ALE3EI_1249 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1249 IPR008824 RuvB-like P-loop domain ALE3EI_1249 IPR008823 RuvB C-terminal winged helix domain ALE3EI_1249 IPR041445 RuvB, AAA lid domain ALE3EI_1250 IPR001128 Cytochrome P450 ALE3EI_1250 IPR017972 Cytochrome P450, conserved site ALE3EI_1250 IPR036396 Cytochrome P450 superfamily ALE3EI_1250 IPR002401 Cytochrome P450, E-class, group I ALE3EI_1251 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALE3EI_1251 IPR013542 Domain of unknown function DUF1730 ALE3EI_1251 IPR009051 Alpha-helical ferredoxin ALE3EI_1251 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALE3EI_1251 IPR004453 Epoxyqueuosine reductase QueG ALE3EI_1252 IPR037062 Malic enzyme, N-terminal domain superfamily ALE3EI_1252 IPR042113 Phosphate acetyltransferase, domain 1 ALE3EI_1252 IPR012188 NAD(P)-dependent malic enzyme ALE3EI_1252 IPR012302 Malic enzyme, NAD-binding ALE3EI_1252 IPR042112 Phosphate acetyltransferase, domain 2 ALE3EI_1252 IPR002505 Phosphate acetyl/butaryl transferase ALE3EI_1252 IPR015884 Malic enzyme, conserved site ALE3EI_1252 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1252 IPR012301 Malic enzyme, N-terminal domain ALE3EI_1253 IPR011114 Holliday junction DNA helicase RuvA, C-terminal ALE3EI_1253 IPR036267 RuvA, C-terminal domain superfamily ALE3EI_1253 IPR010994 RuvA domain 2-like ALE3EI_1253 IPR000085 Bacterial DNA recombination protein RuvA ALE3EI_1253 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1253 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial ALE3EI_1255 IPR033753 Glycine cleavage system H-protein/Simiate ALE3EI_1255 IPR000089 Biotin/lipoyl attachment ALE3EI_1255 IPR002930 Glycine cleavage system H-protein ALE3EI_1255 IPR011053 Single hybrid motif ALE3EI_1255 IPR017453 Glycine cleavage system H-protein, subgroup ALE3EI_1255 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALE3EI_1260 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ALE3EI_1260 IPR001279 Metallo-beta-lactamase ALE3EI_1260 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain ALE3EI_1260 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain ALE3EI_1260 IPR017782 Hydroxyacylglutathione hydrolase ALE3EI_1261 IPR030470 UbiA prenyltransferase conserved site ALE3EI_1261 IPR006369 Protohaem IX farnesyltransferase ALE3EI_1261 IPR000537 UbiA prenyltransferase family ALE3EI_1262 IPR000298 Cytochrome c oxidase subunit III-like ALE3EI_1262 IPR024791 Cytochrome c oxidase subunit III ALE3EI_1262 IPR035973 Cytochrome c oxidase subunit III-like superfamily ALE3EI_1262 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle ALE3EI_1263 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle ALE3EI_1263 IPR035973 Cytochrome c oxidase subunit III-like superfamily ALE3EI_1263 IPR024791 Cytochrome c oxidase subunit III ALE3EI_1263 IPR033945 Cytochrome c oxidase subunit III domain ALE3EI_1263 IPR000298 Cytochrome c oxidase subunit III-like ALE3EI_1267 IPR003782 Copper chaperone SCO1/SenC ALE3EI_1267 IPR036249 Thioredoxin-like superfamily ALE3EI_1267 IPR013766 Thioredoxin domain ALE3EI_1268 IPR007352 Protein of unknown function DUF420 ALE3EI_1270 IPR017871 ABC transporter, conserved site ALE3EI_1270 IPR003439 ABC transporter-like ALE3EI_1270 IPR003593 AAA+ ATPase domain ALE3EI_1270 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1271 IPR017911 ABC transporter, macrolide export, ATP-binding domain ALE3EI_1271 IPR003593 AAA+ ATPase domain ALE3EI_1271 IPR003838 ABC transporter permease protein domain ALE3EI_1271 IPR003439 ABC transporter-like ALE3EI_1271 IPR017871 ABC transporter, conserved site ALE3EI_1271 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1271 IPR025857 MacB-like periplasmic core domain ALE3EI_1272 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1272 IPR017911 ABC transporter, macrolide export, ATP-binding domain ALE3EI_1272 IPR017871 ABC transporter, conserved site ALE3EI_1272 IPR003439 ABC transporter-like ALE3EI_1272 IPR003838 ABC transporter permease protein domain ALE3EI_1272 IPR003593 AAA+ ATPase domain ALE3EI_1272 IPR025857 MacB-like periplasmic core domain ALE3EI_1275 IPR006143 RND efflux pump, membrane fusion protein ALE3EI_1275 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALE3EI_1276 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB ALE3EI_1276 IPR000905 Gcp-like domain ALE3EI_1281 IPR010920 LSM domain superfamily ALE3EI_1281 IPR011066 Mechanosensitive ion channel MscS, C-terminal ALE3EI_1281 IPR006686 Mechanosensitive ion channel MscS, conserved site ALE3EI_1281 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 ALE3EI_1281 IPR008910 Conserved TM helix ALE3EI_1281 IPR006685 Mechanosensitive ion channel MscS ALE3EI_1281 IPR023408 Mechanosensitive ion channel MscS domain superfamily ALE3EI_1282 IPR012341 Six-hairpin glycosidase-like superfamily ALE3EI_1282 IPR036249 Thioredoxin-like superfamily ALE3EI_1282 IPR008928 Six-hairpin glycosidase superfamily ALE3EI_1282 IPR024705 Spermatogenesis-associated protein 20 ALE3EI_1282 IPR004879 Domain of unknown function DUF255 ALE3EI_1284 IPR034904 Fe-S cluster assembly domain superfamily ALE3EI_1284 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal ALE3EI_1288 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region ALE3EI_1288 IPR029016 GAF-like domain superfamily ALE3EI_1288 IPR010559 Signal transduction histidine kinase, internal region ALE3EI_1288 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1288 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_1289 IPR011006 CheY-like superfamily ALE3EI_1289 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1289 IPR007492 LytTR DNA-binding domain ALE3EI_1290 IPR018187 Asp/Glu racemase, active site 1 ALE3EI_1290 IPR033134 Asp/Glu racemase, active site 2 ALE3EI_1290 IPR015942 Asp/Glu/hydantoin racemase ALE3EI_1290 IPR001920 Asp/Glu racemase ALE3EI_1290 IPR004391 Glutamate racemase ALE3EI_1294 IPR036424 Decaprenyl diphosphate synthase-like superfamily ALE3EI_1294 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site ALE3EI_1294 IPR001441 Decaprenyl diphosphate synthase-like ALE3EI_1296 IPR002504 NAD kinase ALE3EI_1296 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal ALE3EI_1296 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal ALE3EI_1296 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ALE3EI_1298 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ ALE3EI_1298 IPR013785 Aldolase-type TIM barrel ALE3EI_1298 IPR036130 Pyridoxine 5'-phosphate synthase ALE3EI_1299 IPR029058 Alpha/Beta hydrolase fold ALE3EI_1299 IPR000073 Alpha/beta hydrolase fold-1 ALE3EI_1303 IPR037041 Trigger factor, C-terminal domain superfamily ALE3EI_1303 IPR036611 Trigger factor ribosome-binding domain superfamily ALE3EI_1303 IPR008880 Trigger factor, C-terminal ALE3EI_1303 IPR027304 Trigger factor/SurA domain superfamily ALE3EI_1303 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ALE3EI_1303 IPR005215 Trigger factor ALE3EI_1303 IPR008881 Trigger factor, ribosome-binding, bacterial ALE3EI_1304 IPR033135 ClpP, histidine active site ALE3EI_1304 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ALE3EI_1304 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_1304 IPR001907 ATP-dependent Clp protease proteolytic subunit ALE3EI_1305 IPR019489 Clp ATPase, C-terminal ALE3EI_1305 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1305 IPR003959 ATPase, AAA-type, core ALE3EI_1305 IPR003593 AAA+ ATPase domain ALE3EI_1305 IPR010603 Zinc finger, ClpX C4-type ALE3EI_1305 IPR038366 Zinc finger, ClpX C4-type superfamily ALE3EI_1305 IPR004487 Clp protease, ATP-binding subunit ClpX ALE3EI_1311 IPR002624 Deoxynucleoside kinase ALE3EI_1311 IPR031314 Deoxynucleoside kinase domain ALE3EI_1311 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1312 IPR004441 RNA methyltransferase TrmH family ALE3EI_1312 IPR029028 Alpha/beta knot methyltransferases ALE3EI_1312 IPR001537 tRNA/rRNA methyltransferase, SpoU type ALE3EI_1312 IPR013123 RNA 2-O ribose methyltransferase, substrate binding ALE3EI_1312 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALE3EI_1313 IPR005748 DNA mismatch repair protein MutS ALE3EI_1313 IPR007695 DNA mismatch repair protein MutS-like, N-terminal ALE3EI_1313 IPR017261 DNA mismatch repair protein MutS/MSH ALE3EI_1313 IPR000432 DNA mismatch repair protein MutS, C-terminal ALE3EI_1313 IPR007861 DNA mismatch repair protein MutS, clamp ALE3EI_1313 IPR007696 DNA mismatch repair protein MutS, core ALE3EI_1313 IPR016151 DNA mismatch repair protein MutS, N-terminal ALE3EI_1313 IPR007860 DNA mismatch repair protein MutS, connector domain ALE3EI_1313 IPR036678 MutS, connector domain superfamily ALE3EI_1313 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1313 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ALE3EI_1314 IPR014922 Domain of unknown function DUF1801 ALE3EI_1314 IPR016786 Uncharacterised protein YdeI, bacterial ALE3EI_1327 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ALE3EI_1327 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_1327 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_1327 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_1328 IPR016040 NAD(P)-binding domain ALE3EI_1328 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1328 IPR005886 UDP-glucose 4-epimerase ALE3EI_1329 IPR006680 Amidohydrolase-related ALE3EI_1329 IPR032466 Metal-dependent hydrolase ALE3EI_1331 IPR014043 Acyl transferase ALE3EI_1331 IPR001227 Acyl transferase domain superfamily ALE3EI_1331 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding ALE3EI_1331 IPR024925 Malonyl CoA-acyl carrier protein transacylase ALE3EI_1331 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ALE3EI_1331 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type ALE3EI_1332 IPR011009 Protein kinase-like domain superfamily ALE3EI_1332 IPR016477 Fructosamine/Ketosamine-3-kinase ALE3EI_1333 IPR024072 Dihydrofolate reductase-like domain superfamily ALE3EI_1333 IPR012259 Dihydrofolate reductase ALE3EI_1333 IPR017925 Dihydrofolate reductase conserved site ALE3EI_1333 IPR001796 Dihydrofolate reductase domain ALE3EI_1337 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_1337 IPR017804 Methyltransferase EgtD-like ALE3EI_1337 IPR035094 Histidine N-alpha-methyltransferase ALE3EI_1337 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type ALE3EI_1337 IPR019257 Histidine-specific methyltransferase, SAM-dependent ALE3EI_1338 IPR024775 DinB-like domain ALE3EI_1338 IPR005532 Sulfatase-modifying factor enzyme ALE3EI_1338 IPR032890 Hercynine oxygenase, Actinobacteria ALE3EI_1338 IPR042095 Sulfatase-modifying factor enzyme superfamily ALE3EI_1338 IPR017806 Ergothioneine biosynthesis protein EgtB ALE3EI_1338 IPR034660 DinB/YfiT-like putative metalloenzymes ALE3EI_1338 IPR016187 C-type lectin fold ALE3EI_1341 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain ALE3EI_1341 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily ALE3EI_1341 IPR000398 Thymidylate synthase ALE3EI_1342 IPR008276 Concentrative nucleoside transporter ALE3EI_1342 IPR002668 Concentrative nucleoside transporter N-terminal domain ALE3EI_1342 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain ALE3EI_1342 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial ALE3EI_1342 IPR011657 Concentrative nucleoside transporter C-terminal domain ALE3EI_1344 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site ALE3EI_1344 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_1344 IPR001308 Electron transfer flavoprotein alpha subunit/FixB ALE3EI_1344 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal ALE3EI_1344 IPR029035 DHS-like NAD/FAD-binding domain superfamily ALE3EI_1344 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal ALE3EI_1344 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal ALE3EI_1346 IPR011053 Single hybrid motif ALE3EI_1346 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALE3EI_1346 IPR000089 Biotin/lipoyl attachment ALE3EI_1346 IPR033248 Transketolase, C-terminal domain ALE3EI_1346 IPR005475 Transketolase-like, pyrimidine-binding domain ALE3EI_1346 IPR029061 Thiamin diphosphate-binding fold ALE3EI_1346 IPR027110 Pyruvate dehydrogenase E1 component subunit beta ALE3EI_1346 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ALE3EI_1347 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_1347 IPR012910 TonB-dependent receptor, plug domain ALE3EI_1347 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ALE3EI_1347 IPR023996 TonB-dependent outer membrane protein, SusC/RagA ALE3EI_1347 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_1347 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site ALE3EI_1348 IPR016047 Peptidase M23 ALE3EI_1348 IPR011055 Duplicated hybrid motif ALE3EI_1349 IPR004131 Pyrophosphate-energised proton pump ALE3EI_1350 IPR025105 Domain of unknown function DUF4010 ALE3EI_1352 IPR025198 Polyphosphate kinase N-terminal domain ALE3EI_1352 IPR041108 Polyphosphate kinase, C-terminal domain 1 ALE3EI_1352 IPR024953 Polyphosphate kinase middle domain ALE3EI_1352 IPR003414 Polyphosphate kinase ALE3EI_1352 IPR001736 Phospholipase D/Transphosphatidylase ALE3EI_1352 IPR036832 Polyphosphate kinase N-terminal domain superfamily ALE3EI_1352 IPR036830 Polyphosphate kinase middle domain superfamily ALE3EI_1352 IPR025200 Polyphosphate kinase C-terminal domain 2 ALE3EI_1353 IPR002624 Deoxynucleoside kinase ALE3EI_1353 IPR031314 Deoxynucleoside kinase domain ALE3EI_1353 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1357 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_1357 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_1357 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ALE3EI_1357 IPR012910 TonB-dependent receptor, plug domain ALE3EI_1357 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site ALE3EI_1357 IPR023996 TonB-dependent outer membrane protein, SusC/RagA ALE3EI_1361 IPR009057 Homeobox-like domain superfamily ALE3EI_1361 IPR001647 DNA-binding HTH domain, TetR-type ALE3EI_1361 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ALE3EI_1361 IPR041612 YfiR, C-terminal ALE3EI_1362 IPR001433 Oxidoreductase FAD/NAD(P)-binding ALE3EI_1362 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ALE3EI_1362 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site ALE3EI_1362 IPR017938 Riboflavin synthase-like beta-barrel ALE3EI_1362 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit ALE3EI_1362 IPR012675 Beta-grasp domain superfamily ALE3EI_1362 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ALE3EI_1362 IPR036010 2Fe-2S ferredoxin-like superfamily ALE3EI_1362 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase ALE3EI_1362 IPR017927 FAD-binding domain, ferredoxin reductase-type ALE3EI_1362 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ALE3EI_1363 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C ALE3EI_1363 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A ALE3EI_1363 IPR012347 Ferritin-like ALE3EI_1363 IPR009078 Ferritin-like superfamily ALE3EI_1364 IPR009359 Phenylacetic acid degradation B ALE3EI_1364 IPR038693 Phenylacetyl-CoA epoxidase, subunit B ALE3EI_1365 IPR012347 Ferritin-like ALE3EI_1365 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C ALE3EI_1365 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C ALE3EI_1365 IPR009078 Ferritin-like superfamily ALE3EI_1366 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit ALE3EI_1366 IPR002744 MIP18 family-like ALE3EI_1366 IPR034904 Fe-S cluster assembly domain superfamily ALE3EI_1368 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB ALE3EI_1368 IPR001753 Enoyl-CoA hydratase/isomerase ALE3EI_1368 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_1368 IPR014748 Enoyl-CoA hydratase, C-terminal ALE3EI_1369 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site ALE3EI_1369 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC ALE3EI_1369 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal ALE3EI_1369 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ALE3EI_1369 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1369 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ALE3EI_1369 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ALE3EI_1371 IPR020610 Thiolase, active site ALE3EI_1371 IPR012793 Beta-ketoadipyl CoA thiolase ALE3EI_1371 IPR002155 Thiolase ALE3EI_1371 IPR016039 Thiolase-like ALE3EI_1371 IPR020615 Thiolase, acyl-enzyme intermediate active site ALE3EI_1371 IPR020617 Thiolase, C-terminal ALE3EI_1371 IPR020613 Thiolase, conserved site ALE3EI_1371 IPR020616 Thiolase, N-terminal ALE3EI_1373 IPR016162 Aldehyde dehydrogenase, N-terminal ALE3EI_1373 IPR016163 Aldehyde dehydrogenase, C-terminal ALE3EI_1373 IPR015590 Aldehyde dehydrogenase domain ALE3EI_1373 IPR029069 HotDog domain superfamily ALE3EI_1373 IPR002539 MaoC-like dehydratase domain ALE3EI_1373 IPR016161 Aldehyde/histidinol dehydrogenase ALE3EI_1373 IPR011966 Phenylacetic acid degradation protein PaaN ALE3EI_1375 IPR023446 Carnitine operon protein CaiE ALE3EI_1375 IPR001451 Hexapeptide repeat ALE3EI_1375 IPR011004 Trimeric LpxA-like superfamily ALE3EI_1376 IPR000089 Biotin/lipoyl attachment ALE3EI_1376 IPR014276 2-oxoglutarate dehydrogenase, E2 component ALE3EI_1376 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain ALE3EI_1376 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALE3EI_1376 IPR004167 Peripheral subunit-binding domain ALE3EI_1376 IPR011053 Single hybrid motif ALE3EI_1376 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ALE3EI_1376 IPR036625 E3-binding domain superfamily ALE3EI_1377 IPR033939 Branched-chain aminotransferase ALE3EI_1377 IPR018300 Aminotransferase, class IV, conserved site ALE3EI_1377 IPR005786 Branched-chain amino acid aminotransferase II ALE3EI_1377 IPR036038 Aminotransferase-like, PLP-dependent enzymes ALE3EI_1377 IPR001544 Aminotransferase class IV ALE3EI_1378 IPR005475 Transketolase-like, pyrimidine-binding domain ALE3EI_1378 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ALE3EI_1378 IPR033248 Transketolase, C-terminal domain ALE3EI_1378 IPR029061 Thiamin diphosphate-binding fold ALE3EI_1381 IPR036190 Urocanase superfamily ALE3EI_1381 IPR035085 Urocanase, Rossmann-like domain ALE3EI_1381 IPR035400 Urocanase, N-terminal domain ALE3EI_1381 IPR038364 Urocanase, central domain superfamily ALE3EI_1381 IPR023636 Urocanase conserved site ALE3EI_1381 IPR023637 Urocanase ALE3EI_1381 IPR035401 Urocanase, C-terminal domain ALE3EI_1389 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase ALE3EI_1389 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALE3EI_1389 IPR001926 Pyridoxal-phosphate dependent enzyme ALE3EI_1389 IPR005966 D-cysteine desulfhydrase ALE3EI_1390 IPR018392 LysM domain ALE3EI_1390 IPR036779 LysM domain superfamily ALE3EI_1390 IPR000064 Endopeptidase, NLPC/P60 domain ALE3EI_1390 IPR038765 Papain-like cysteine peptidase superfamily ALE3EI_1391 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase ALE3EI_1391 IPR005814 Aminotransferase class-III ALE3EI_1391 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_1391 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_1391 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_1394 IPR029070 Chitinase insertion domain superfamily ALE3EI_1394 IPR036116 Fibronectin type III superfamily ALE3EI_1394 IPR001223 Glycoside hydrolase family 18, catalytic domain ALE3EI_1394 IPR001579 Glycoside hydrolase, chitinase active site ALE3EI_1394 IPR013783 Immunoglobulin-like fold ALE3EI_1394 IPR017853 Glycoside hydrolase superfamily ALE3EI_1394 IPR011583 Chitinase II ALE3EI_1394 IPR003961 Fibronectin type III ALE3EI_1394 IPR036573 Carbohydrate-binding module superfamily 5/12 ALE3EI_1394 IPR003610 Carbohydrate-binding module family 5/12 ALE3EI_1399 IPR006195 Aminoacyl-tRNA synthetase, class II ALE3EI_1399 IPR002313 Lysine-tRNA ligase, class II ALE3EI_1399 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal ALE3EI_1399 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) ALE3EI_1399 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1399 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ALE3EI_1401 IPR011006 CheY-like superfamily ALE3EI_1401 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_1401 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_1401 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1403 IPR000544 Octanoyltransferase ALE3EI_1403 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain ALE3EI_1403 IPR020605 Octanoyltransferase, conserved site ALE3EI_1405 IPR025713 Motility protein B, N-terminal domain ALE3EI_1405 IPR006665 OmpA-like domain ALE3EI_1405 IPR036737 OmpA-like domain superfamily ALE3EI_1409 IPR018062 HTH domain AraC-type, conserved site ALE3EI_1409 IPR018060 DNA binding HTH domain, AraC-type ALE3EI_1409 IPR011110 Two component regulator propeller ALE3EI_1409 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_1409 IPR011006 CheY-like superfamily ALE3EI_1409 IPR011123 Two component regulator three Y ALE3EI_1409 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1409 IPR015943 WD40/YVTN repeat-like-containing domain superfamily ALE3EI_1409 IPR005467 Histidine kinase domain ALE3EI_1409 IPR009057 Homeobox-like domain superfamily ALE3EI_1409 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_1409 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1409 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_1409 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_1409 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ALE3EI_1409 IPR013783 Immunoglobulin-like fold ALE3EI_1411 IPR022898 Ribonuclease HII ALE3EI_1411 IPR001352 Ribonuclease HII/HIII ALE3EI_1411 IPR024567 Ribonuclease HII/HIII domain ALE3EI_1411 IPR012337 Ribonuclease H-like superfamily ALE3EI_1411 IPR036397 Ribonuclease H superfamily ALE3EI_1419 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ALE3EI_1419 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ALE3EI_1419 IPR006089 Acyl-CoA dehydrogenase, conserved site ALE3EI_1419 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ALE3EI_1419 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ALE3EI_1419 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ALE3EI_1419 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ALE3EI_1420 IPR005338 Anhydro-N-acetylmuramic acid kinase ALE3EI_1421 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase ALE3EI_1421 IPR014362 Glutamate dehydrogenase ALE3EI_1421 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1421 IPR033524 Leu/Phe/Val dehydrogenases active site ALE3EI_1421 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal ALE3EI_1421 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain ALE3EI_1422 IPR004680 Citrate transporter-like domain ALE3EI_1423 IPR002898 MotA/TolQ/ExbB proton channel ALE3EI_1424 IPR003400 Biopolymer transport protein ExbD/TolR ALE3EI_1427 IPR018109 Folylpolyglutamate synthetase, conserved site ALE3EI_1427 IPR013221 Mur ligase, central ALE3EI_1427 IPR036615 Mur ligase, C-terminal domain superfamily ALE3EI_1427 IPR036565 Mur-like, catalytic domain superfamily ALE3EI_1427 IPR004101 Mur ligase, C-terminal ALE3EI_1427 IPR001645 Folylpolyglutamate synthetase ALE3EI_1428 IPR000713 Mur ligase, N-terminal catalytic domain ALE3EI_1428 IPR036615 Mur ligase, C-terminal domain superfamily ALE3EI_1428 IPR004101 Mur ligase, C-terminal ALE3EI_1428 IPR036565 Mur-like, catalytic domain superfamily ALE3EI_1428 IPR035911 MurE/MurF, N-terminal ALE3EI_1428 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase ALE3EI_1428 IPR013221 Mur ligase, central ALE3EI_1429 IPR016187 C-type lectin fold ALE3EI_1429 IPR005532 Sulfatase-modifying factor enzyme ALE3EI_1429 IPR042095 Sulfatase-modifying factor enzyme superfamily ALE3EI_1433 IPR029061 Thiamin diphosphate-binding fold ALE3EI_1433 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y ALE3EI_1433 IPR001017 Dehydrogenase, E1 component ALE3EI_1434 IPR011053 Single hybrid motif ALE3EI_1434 IPR004167 Peripheral subunit-binding domain ALE3EI_1434 IPR036625 E3-binding domain superfamily ALE3EI_1434 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ALE3EI_1434 IPR000089 Biotin/lipoyl attachment ALE3EI_1434 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain ALE3EI_1434 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALE3EI_1434 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex ALE3EI_1435 IPR002347 Short-chain dehydrogenase/reductase SDR ALE3EI_1435 IPR020904 Short-chain dehydrogenase/reductase, conserved site ALE3EI_1435 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1437 IPR018247 EF-Hand 1, calcium-binding site ALE3EI_1437 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase ALE3EI_1437 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal ALE3EI_1437 IPR005835 Nucleotidyl transferase domain ALE3EI_1437 IPR014710 RmlC-like jelly roll fold ALE3EI_1437 IPR011051 RmlC-like cupin domain superfamily ALE3EI_1437 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_1439 IPR017871 ABC transporter, conserved site ALE3EI_1439 IPR003593 AAA+ ATPase domain ALE3EI_1439 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl ALE3EI_1439 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1439 IPR003439 ABC transporter-like ALE3EI_1440 IPR030802 ABC transporter permease MalE ALE3EI_1440 IPR003453 ABC transport permease subunit MlaE, Proteobacteria ALE3EI_1441 IPR001952 Alkaline phosphatase ALE3EI_1441 IPR018299 Alkaline phosphatase, active site ALE3EI_1441 IPR017850 Alkaline-phosphatase-like, core domain superfamily ALE3EI_1442 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_1442 IPR001173 Glycosyltransferase 2-like ALE3EI_1444 IPR016039 Thiolase-like ALE3EI_1444 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 ALE3EI_1444 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal ALE3EI_1444 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALE3EI_1445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_1445 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_1445 IPR020581 Glycine cleavage system P protein ALE3EI_1445 IPR003437 Glycine dehydrogenase (decarboxylating) ALE3EI_1445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_1449 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ALE3EI_1449 IPR001567 Peptidase M3A/M3B catalytic domain ALE3EI_1450 IPR000031 PurE domain ALE3EI_1450 IPR035893 PurE domain superfamily ALE3EI_1450 IPR024694 PurE, prokaryotic type ALE3EI_1450 IPR033747 Class I PurE ALE3EI_1451 IPR011761 ATP-grasp fold ALE3EI_1451 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit ALE3EI_1451 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain ALE3EI_1451 IPR011054 Rudiment single hybrid motif ALE3EI_1451 IPR013815 ATP-grasp fold, subdomain 1 ALE3EI_1451 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ALE3EI_1451 IPR016185 Pre-ATP-grasp domain superfamily ALE3EI_1452 IPR000850 Adenylate kinase/UMP-CMP kinase ALE3EI_1452 IPR033690 Adenylate kinase, conserved site ALE3EI_1452 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1453 IPR014100 GTP-binding protein Obg/CgtA ALE3EI_1453 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1453 IPR006073 GTP binding domain ALE3EI_1453 IPR036726 GTP1/OBG domain superfamily ALE3EI_1453 IPR006169 GTP1/OBG domain ALE3EI_1453 IPR006074 GTP1/OBG, conserved site ALE3EI_1453 IPR005225 Small GTP-binding protein domain ALE3EI_1453 IPR031167 OBG-type guanine nucleotide-binding (G) domain ALE3EI_1453 IPR035101 GTP-binding protein, Obg-type ALE3EI_1456 IPR036565 Mur-like, catalytic domain superfamily ALE3EI_1456 IPR004101 Mur ligase, C-terminal ALE3EI_1456 IPR036615 Mur ligase, C-terminal domain superfamily ALE3EI_1456 IPR000713 Mur ligase, N-terminal catalytic domain ALE3EI_1456 IPR005758 UDP-N-acetylmuramate--L-alanine ligase ALE3EI_1456 IPR013221 Mur ligase, central ALE3EI_1459 IPR020891 Uncharacterised protein family UPF0758, conserved site ALE3EI_1459 IPR001405 Uncharacterised protein family UPF0758 ALE3EI_1459 IPR010994 RuvA domain 2-like ALE3EI_1459 IPR037518 MPN domain ALE3EI_1459 IPR025657 RadC-like JAB domain ALE3EI_1465 IPR021886 MgsA AAA+ ATPase C-terminal ALE3EI_1465 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal ALE3EI_1465 IPR003959 ATPase, AAA-type, core ALE3EI_1465 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1465 IPR003593 AAA+ ATPase domain ALE3EI_1465 IPR032423 AAA C-terminal domain ALE3EI_1467 IPR013123 RNA 2-O ribose methyltransferase, substrate binding ALE3EI_1467 IPR001537 tRNA/rRNA methyltransferase, SpoU type ALE3EI_1467 IPR029064 50S ribosomal protein L30e-like ALE3EI_1467 IPR029028 Alpha/beta knot methyltransferases ALE3EI_1467 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALE3EI_1467 IPR004441 RNA methyltransferase TrmH family ALE3EI_1470 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site ALE3EI_1470 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_1470 IPR023996 TonB-dependent outer membrane protein, SusC/RagA ALE3EI_1470 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ALE3EI_1470 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ALE3EI_1470 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_1470 IPR012910 TonB-dependent receptor, plug domain ALE3EI_1473 IPR000235 Ribosomal protein S5/S7 ALE3EI_1473 IPR036823 Ribosomal protein S7 domain superfamily ALE3EI_1473 IPR023798 Ribosomal protein S7 domain ALE3EI_1473 IPR005717 Ribosomal protein S7, bacterial/organellar-type ALE3EI_1473 IPR020606 Ribosomal protein S7, conserved site ALE3EI_1474 IPR009022 Elongation factor G, domain III ALE3EI_1474 IPR000795 Transcription factor, GTP-binding domain ALE3EI_1474 IPR005225 Small GTP-binding protein domain ALE3EI_1474 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALE3EI_1474 IPR031157 Tr-type G domain, conserved site ALE3EI_1474 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_1474 IPR035647 EF-G domain III/V-like ALE3EI_1474 IPR004540 Translation elongation factor EFG/EF2 ALE3EI_1474 IPR005517 Translation elongation factor EFG/EF2, domain IV ALE3EI_1474 IPR009000 Translation protein, beta-barrel domain superfamily ALE3EI_1474 IPR000640 Elongation factor EFG, domain V-like ALE3EI_1474 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1474 IPR004161 Translation elongation factor EFTu-like, domain 2 ALE3EI_1474 IPR035649 EFG, domain V ALE3EI_1474 IPR041095 Elongation Factor G, domain II ALE3EI_1475 IPR001848 Ribosomal protein S10 ALE3EI_1475 IPR027486 Ribosomal protein S10 domain ALE3EI_1475 IPR036838 Ribosomal protein S10 domain superfamily ALE3EI_1475 IPR018268 Ribosomal protein S10, conserved site ALE3EI_1476 IPR009000 Translation protein, beta-barrel domain superfamily ALE3EI_1476 IPR000597 Ribosomal protein L3 ALE3EI_1476 IPR019927 Ribosomal protein L3, bacterial/organelle-type ALE3EI_1476 IPR019926 Ribosomal protein L3, conserved site ALE3EI_1477 IPR013005 50S ribosomal protein uL4 ALE3EI_1477 IPR023574 Ribosomal protein L4 domain superfamily ALE3EI_1477 IPR002136 Ribosomal protein L4/L1e ALE3EI_1478 IPR012678 Ribosomal protein L23/L15e core domain superfamily ALE3EI_1478 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ALE3EI_1478 IPR013025 Ribosomal protein L25/L23 ALE3EI_1479 IPR022666 Ribosomal Proteins L2, RNA binding domain ALE3EI_1479 IPR014722 Ribosomal protein L2, domain 2 ALE3EI_1479 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1479 IPR022669 Ribosomal protein L2, C-terminal ALE3EI_1479 IPR002171 Ribosomal protein L2 ALE3EI_1479 IPR008991 Translation protein SH3-like domain superfamily ALE3EI_1479 IPR005880 Ribosomal protein L2, bacterial/organellar-type ALE3EI_1479 IPR014726 Ribosomal protein L2, domain 3 ALE3EI_1480 IPR023575 Ribosomal protein S19, superfamily ALE3EI_1480 IPR002222 Ribosomal protein S19/S15 ALE3EI_1480 IPR005732 Ribosomal protein S19, bacterial-type ALE3EI_1480 IPR020934 Ribosomal protein S19 conserved site ALE3EI_1481 IPR001063 Ribosomal protein L22/L17 ALE3EI_1481 IPR036394 Ribosomal protein L22/L17 superfamily ALE3EI_1481 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type ALE3EI_1482 IPR018280 Ribosomal protein S3, conserved site ALE3EI_1482 IPR036419 Ribosomal protein S3, C-terminal domain superfamily ALE3EI_1482 IPR001351 Ribosomal protein S3, C-terminal ALE3EI_1482 IPR004087 K Homology domain ALE3EI_1482 IPR015946 K homology domain-like, alpha/beta ALE3EI_1482 IPR004044 K Homology domain, type 2 ALE3EI_1482 IPR009019 K homology domain superfamily, prokaryotic type ALE3EI_1482 IPR005704 Ribosomal protein S3, bacterial-type ALE3EI_1483 IPR000114 Ribosomal protein L16 ALE3EI_1483 IPR020798 Ribosomal protein L16, conserved site ALE3EI_1483 IPR016180 Ribosomal protein L10e/L16 ALE3EI_1483 IPR036920 Ribosomal protein L10e/L16 superfamily ALE3EI_1484 IPR018254 Ribosomal protein L29, conserved site ALE3EI_1484 IPR036049 Ribosomal protein L29/L35 superfamily ALE3EI_1484 IPR001854 Ribosomal protein L29/L35 ALE3EI_1485 IPR019979 Ribosomal protein S17, conserved site ALE3EI_1485 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1485 IPR019984 30S ribosomal protein S17 ALE3EI_1485 IPR000266 Ribosomal protein S17/S11 ALE3EI_1486 IPR036853 Ribosomal protein L14 superfamily ALE3EI_1486 IPR019972 Ribosomal protein L14P, conserved site ALE3EI_1486 IPR005745 Ribosomal protein L14P, bacterial-type ALE3EI_1486 IPR000218 Ribosomal protein L14P ALE3EI_1487 IPR014722 Ribosomal protein L2, domain 2 ALE3EI_1487 IPR003256 Ribosomal protein L24 ALE3EI_1487 IPR005825 Ribosomal protein L24/L26, conserved site ALE3EI_1487 IPR041988 Ribosomal Protein L26/L24, KOW domain ALE3EI_1487 IPR008991 Translation protein SH3-like domain superfamily ALE3EI_1487 IPR005824 KOW ALE3EI_1488 IPR031310 Ribosomal protein L5, N-terminal ALE3EI_1488 IPR022803 Ribosomal protein L5 domain superfamily ALE3EI_1488 IPR031309 Ribosomal protein L5, C-terminal ALE3EI_1488 IPR020930 Ribosomal protein L5, bacterial-type ALE3EI_1488 IPR002132 Ribosomal protein L5 ALE3EI_1489 IPR023036 Ribosomal protein S14, bacterial/plastid ALE3EI_1489 IPR018271 Ribosomal protein S14, conserved site ALE3EI_1489 IPR001209 Ribosomal protein S14 ALE3EI_1490 IPR035987 Ribosomal protein S8 superfamily ALE3EI_1490 IPR000630 Ribosomal protein S8 ALE3EI_1491 IPR019906 Ribosomal protein L6, bacterial-type ALE3EI_1491 IPR002358 Ribosomal protein L6, conserved site ALE3EI_1491 IPR000702 Ribosomal protein L6 ALE3EI_1491 IPR020040 Ribosomal protein L6, alpha-beta domain ALE3EI_1491 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily ALE3EI_1492 IPR005484 Ribosomal protein L18 ALE3EI_1492 IPR004389 Ribosomal protein L18, bacterial-type ALE3EI_1493 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALE3EI_1493 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_1493 IPR000851 Ribosomal protein S5 ALE3EI_1493 IPR018192 Ribosomal protein S5, N-terminal, conserved site ALE3EI_1493 IPR013810 Ribosomal protein S5, N-terminal ALE3EI_1493 IPR005324 Ribosomal protein S5, C-terminal ALE3EI_1493 IPR005712 Ribosomal protein S5, bacterial-type ALE3EI_1494 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily ALE3EI_1494 IPR018038 Ribosomal protein L30, conserved site ALE3EI_1494 IPR005996 Ribosomal protein L30, bacterial-type ALE3EI_1494 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ALE3EI_1495 IPR030878 Ribosomal protein L15 ALE3EI_1495 IPR036227 Ribosomal L18e/L15P superfamily ALE3EI_1495 IPR001196 Ribosomal protein L15, conserved site ALE3EI_1495 IPR005749 Ribosomal protein L15, bacterial-type ALE3EI_1495 IPR021131 Ribosomal protein L18e/L15P ALE3EI_1496 IPR023201 SecY domain superfamily ALE3EI_1496 IPR030659 SecY conserved site ALE3EI_1496 IPR002208 SecY/SEC61-alpha family ALE3EI_1496 IPR026593 Protein translocase subunit SecY ALE3EI_1497 IPR004368 Translation initiation factor IF-1 ALE3EI_1497 IPR006196 RNA-binding domain, S1, IF1 type ALE3EI_1497 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_1498 IPR018269 Ribosomal protein S13, conserved site ALE3EI_1498 IPR019980 Ribosomal protein S13, bacterial-type ALE3EI_1498 IPR010979 Ribosomal protein S13-like, H2TH ALE3EI_1498 IPR001892 Ribosomal protein S13 ALE3EI_1498 IPR027437 30s ribosomal protein S13, C-terminal ALE3EI_1499 IPR001971 Ribosomal protein S11 ALE3EI_1499 IPR036967 Ribosomal protein S11 superfamily ALE3EI_1499 IPR018102 Ribosomal S11, conserved site ALE3EI_1499 IPR019981 Ribosomal protein S11, bacterial-type ALE3EI_1500 IPR022801 Ribosomal protein S4/S9 ALE3EI_1500 IPR002942 RNA-binding S4 domain ALE3EI_1500 IPR005709 Ribosomal protein S4, bacterial-type ALE3EI_1500 IPR036986 RNA-binding S4 domain superfamily ALE3EI_1500 IPR001912 Ribosomal protein S4/S9, N-terminal ALE3EI_1501 IPR011262 DNA-directed RNA polymerase, insert domain ALE3EI_1501 IPR036643 DNA-directed RNA polymerase, insert domain superfamily ALE3EI_1501 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type ALE3EI_1501 IPR011773 DNA-directed RNA polymerase, alpha subunit ALE3EI_1501 IPR011260 RNA polymerase, alpha subunit, C-terminal ALE3EI_1501 IPR036603 RNA polymerase, RBP11-like subunit ALE3EI_1502 IPR036373 Ribosomal protein L17 superfamily ALE3EI_1502 IPR000456 Ribosomal protein L17 ALE3EI_1503 IPR006274 Carbamoyl-phosphate synthase, small subunit ALE3EI_1503 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily ALE3EI_1503 IPR029062 Class I glutamine amidotransferase-like ALE3EI_1503 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain ALE3EI_1503 IPR017926 Glutamine amidotransferase ALE3EI_1503 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain ALE3EI_1504 IPR020810 Enolase, C-terminal TIM barrel domain ALE3EI_1504 IPR020809 Enolase, conserved site ALE3EI_1504 IPR029017 Enolase-like, N-terminal ALE3EI_1504 IPR036849 Enolase-like, C-terminal domain superfamily ALE3EI_1504 IPR020811 Enolase, N-terminal ALE3EI_1504 IPR000941 Enolase ALE3EI_1505 IPR036969 Citrate synthase superfamily ALE3EI_1505 IPR016142 Citrate synthase-like, large alpha subdomain ALE3EI_1505 IPR016143 Citrate synthase-like, small alpha subdomain ALE3EI_1505 IPR002020 Citrate synthase ALE3EI_1505 IPR019810 Citrate synthase active site ALE3EI_1505 IPR024176 Citrate synthase, bacterial-type ALE3EI_1505 IPR010953 Citrate synthase, type I ALE3EI_1509 IPR013549 Domain of unknown function DUF1731 ALE3EI_1509 IPR001509 NAD-dependent epimerase/dehydratase ALE3EI_1509 IPR010099 Epimerase family protein SDR39U1 ALE3EI_1509 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1511 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily ALE3EI_1511 IPR008909 DALR anticodon binding ALE3EI_1511 IPR035684 Arginyl-tRNA synthetase, catalytic core domain ALE3EI_1511 IPR005148 Arginyl tRNA synthetase N-terminal domain ALE3EI_1511 IPR001278 Arginine-tRNA ligase ALE3EI_1511 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ALE3EI_1511 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_1511 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ALE3EI_1516 IPR011006 CheY-like superfamily ALE3EI_1516 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_1516 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_1516 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1517 IPR005467 Histidine kinase domain ALE3EI_1517 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1517 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ALE3EI_1517 IPR007895 MASE1 ALE3EI_1517 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_1534 IPR001650 Helicase, C-terminal ALE3EI_1534 IPR028622 ATP-dependent RNA helicase RhlE ALE3EI_1534 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1534 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ALE3EI_1534 IPR011545 DEAD/DEAH box helicase domain ALE3EI_1534 IPR014014 RNA helicase, DEAD-box type, Q motif ALE3EI_1534 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_1536 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain ALE3EI_1536 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily ALE3EI_1536 IPR022941 Signal recognition particle, SRP54 subunit ALE3EI_1536 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily ALE3EI_1536 IPR004125 Signal recognition particle, SRP54 subunit, M-domain ALE3EI_1536 IPR013822 Signal recognition particle SRP54, helical bundle ALE3EI_1536 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1536 IPR003593 AAA+ ATPase domain ALE3EI_1536 IPR004780 Signal recognition particle protein ALE3EI_1537 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ALE3EI_1537 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase ALE3EI_1537 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1537 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ALE3EI_1537 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site ALE3EI_1538 IPR010652 Domain of unknown function DUF1232 ALE3EI_1547 IPR033186 Helicase HerA-like C-terminal ALE3EI_1547 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1548 IPR006175 YjgF/YER057c/UK114 family ALE3EI_1548 IPR035959 RutC-like superfamily ALE3EI_1548 IPR019897 RidA, conserved site ALE3EI_1548 IPR006056 RidA family ALE3EI_1549 IPR024924 7-carboxy-7-deazaguanine synthase-like ALE3EI_1549 IPR007197 Radical SAM ALE3EI_1549 IPR013785 Aldolase-type TIM barrel ALE3EI_1551 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1551 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALE3EI_1551 IPR001241 DNA topoisomerase, type IIA ALE3EI_1551 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ALE3EI_1551 IPR011557 DNA gyrase, subunit B ALE3EI_1551 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal ALE3EI_1551 IPR018522 DNA topoisomerase, type IIA, conserved site ALE3EI_1551 IPR006171 TOPRIM domain ALE3EI_1551 IPR034160 DNA gyrase subunit B, TOPRIM domain ALE3EI_1551 IPR002288 DNA gyrase B subunit, C-terminal ALE3EI_1551 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_1551 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 ALE3EI_1551 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_1553 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal ALE3EI_1553 IPR001236 Lactate/malate dehydrogenase, N-terminal ALE3EI_1553 IPR022383 Lactate/malate dehydrogenase, C-terminal ALE3EI_1553 IPR001557 L-lactate/malate dehydrogenase ALE3EI_1553 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1553 IPR011275 Malate dehydrogenase, type 3 ALE3EI_1554 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ALE3EI_1554 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ALE3EI_1554 IPR005791 Protein translocase subunit SecD ALE3EI_1554 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ALE3EI_1556 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt ALE3EI_1557 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ALE3EI_1557 IPR015803 Cysteine-tRNA ligase ALE3EI_1557 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR ALE3EI_1557 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase ALE3EI_1557 IPR032678 tRNA synthetases class I, catalytic domain ALE3EI_1557 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_1558 IPR001474 GTP cyclohydrolase I ALE3EI_1558 IPR018234 GTP cyclohydrolase I, conserved site ALE3EI_1558 IPR020602 GTP cyclohydrolase I domain ALE3EI_1563 IPR006195 Aminoacyl-tRNA synthetase, class II ALE3EI_1563 IPR004154 Anticodon-binding ALE3EI_1563 IPR036621 Anticodon-binding domain superfamily ALE3EI_1563 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type ALE3EI_1563 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) ALE3EI_1563 IPR016061 Proline-tRNA ligase, class II, C-terminal ALE3EI_1563 IPR017449 Prolyl-tRNA synthetase, class II ALE3EI_1563 IPR033721 Prolyl-tRNA synthetase, catalytic domain ALE3EI_1564 IPR002583 Ribosomal protein S20 ALE3EI_1564 IPR036510 Ribosomal protein S20 superfamily ALE3EI_1572 IPR002771 Multiple antibiotic resistance (MarC)-related ALE3EI_1574 IPR010233 Ubiquinone biosynthesis O-methyltransferase ALE3EI_1574 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_1577 IPR029058 Alpha/Beta hydrolase fold ALE3EI_1577 IPR000073 Alpha/beta hydrolase fold-1 ALE3EI_1580 IPR032466 Metal-dependent hydrolase ALE3EI_1580 IPR017593 Allantoinase ALE3EI_1580 IPR006680 Amidohydrolase-related ALE3EI_1580 IPR011059 Metal-dependent hydrolase, composite domain superfamily ALE3EI_1583 IPR001586 Beta-lactamase, class-C active site ALE3EI_1583 IPR012338 Beta-lactamase/transpeptidase-like ALE3EI_1583 IPR001466 Beta-lactamase-related ALE3EI_1588 IPR016705 Photosynthesis system II assembly factor Ycf48/Hcf136 ALE3EI_1588 IPR015943 WD40/YVTN repeat-like-containing domain superfamily ALE3EI_1588 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain ALE3EI_1598 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative ALE3EI_1615 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_1615 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_1615 IPR001845 HTH ArsR-type DNA-binding domain ALE3EI_1615 IPR011991 ArsR-like helix-turn-helix domain ALE3EI_1616 IPR040980 SWI2/SNF2 ATPase ALE3EI_1616 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_1616 IPR022625 Type-1 restriction enzyme R protein, C-terminal ALE3EI_1616 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal ALE3EI_1616 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1616 IPR004473 Restriction endonuclease, type I, HsdR ALE3EI_1617 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1618 IPR000055 Restriction endonuclease, type I, HsdS ALE3EI_1619 IPR003356 DNA methylase, adenine-specific ALE3EI_1619 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain ALE3EI_1619 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily ALE3EI_1619 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_1619 IPR004546 Restriction endonuclease, type I, HsdM ALE3EI_1619 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ALE3EI_1625 IPR004107 Integrase, SAM-like, N-terminal ALE3EI_1625 IPR011010 DNA breaking-rejoining enzyme, catalytic core ALE3EI_1625 IPR013762 Integrase-like, catalytic domain superfamily ALE3EI_1625 IPR002104 Integrase, catalytic domain ALE3EI_1625 IPR010998 Integrase/recombinase, N-terminal ALE3EI_1626 IPR004821 Cytidyltransferase-like domain ALE3EI_1626 IPR001980 Phosphopantetheine adenylyltransferase ALE3EI_1626 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_1627 IPR011761 ATP-grasp fold ALE3EI_1627 IPR013815 ATP-grasp fold, subdomain 1 ALE3EI_1627 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site ALE3EI_1627 IPR016185 Pre-ATP-grasp domain superfamily ALE3EI_1627 IPR005905 D-alanine--D-alanine ligase ALE3EI_1627 IPR011095 D-alanine--D-alanine ligase, C-terminal ALE3EI_1627 IPR011127 D-alanine--D-alanine ligase, N-terminal domain ALE3EI_1629 IPR006145 Pseudouridine synthase, RsuA/RluA ALE3EI_1629 IPR002942 RNA-binding S4 domain ALE3EI_1629 IPR036986 RNA-binding S4 domain superfamily ALE3EI_1629 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site ALE3EI_1629 IPR006225 Pseudouridine synthase, RluC/RluD ALE3EI_1629 IPR020103 Pseudouridine synthase, catalytic domain superfamily ALE3EI_1630 IPR005583 Peroxide stress protein YaaA ALE3EI_1637 IPR002028 Tryptophan synthase, alpha chain ALE3EI_1637 IPR018204 Tryptophan synthase, alpha chain, active site ALE3EI_1637 IPR011060 Ribulose-phosphate binding barrel ALE3EI_1637 IPR013785 Aldolase-type TIM barrel ALE3EI_1638 IPR006654 Tryptophan synthase, beta chain ALE3EI_1638 IPR006653 Tryptophan synthase, beta chain, conserved site ALE3EI_1638 IPR023026 Tryptophan synthase beta chain/beta chain-like ALE3EI_1638 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALE3EI_1638 IPR001926 Pyridoxal-phosphate dependent enzyme ALE3EI_1639 IPR013785 Aldolase-type TIM barrel ALE3EI_1639 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) ALE3EI_1639 IPR011060 Ribulose-phosphate binding barrel ALE3EI_1640 IPR001468 Indole-3-glycerol phosphate synthase, conserved site ALE3EI_1640 IPR013798 Indole-3-glycerol phosphate synthase ALE3EI_1640 IPR011060 Ribulose-phosphate binding barrel ALE3EI_1640 IPR013785 Aldolase-type TIM barrel ALE3EI_1641 IPR005940 Anthranilate phosphoribosyl transferase ALE3EI_1641 IPR000312 Glycosyl transferase, family 3 ALE3EI_1641 IPR017459 Glycosyl transferase family 3, N-terminal domain ALE3EI_1641 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily ALE3EI_1641 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily ALE3EI_1642 IPR017926 Glutamine amidotransferase ALE3EI_1642 IPR029062 Class I glutamine amidotransferase-like ALE3EI_1642 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain ALE3EI_1643 IPR006805 Anthranilate synthase component I, N-terminal ALE3EI_1643 IPR015890 Chorismate-utilising enzyme, C-terminal ALE3EI_1643 IPR005256 Anthranilate synthase component I, PabB-like ALE3EI_1643 IPR005801 ADC synthase ALE3EI_1643 IPR019999 Anthranilate synthase component I-like ALE3EI_1647 IPR000835 MarR-type HTH domain ALE3EI_1647 IPR023187 Transcriptional regulator MarR-type, conserved site ALE3EI_1647 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_1647 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_1648 IPR036249 Thioredoxin-like superfamily ALE3EI_1648 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant ALE3EI_1648 IPR013766 Thioredoxin domain ALE3EI_1650 IPR001763 Rhodanese-like domain ALE3EI_1650 IPR036873 Rhodanese-like domain superfamily ALE3EI_1651 IPR001763 Rhodanese-like domain ALE3EI_1651 IPR022111 Rhodanase, C-terminal ALE3EI_1651 IPR036873 Rhodanese-like domain superfamily ALE3EI_1651 IPR040503 UPF0176, acylphosphatase-like domain ALE3EI_1651 IPR020936 Uncharacterised protein family UPF0176 ALE3EI_1658 IPR010364 Uncharacterised protein family, inner membrane CreD ALE3EI_1662 IPR035965 PAS domain superfamily ALE3EI_1662 IPR011006 CheY-like superfamily ALE3EI_1662 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_1662 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1662 IPR005467 Histidine kinase domain ALE3EI_1662 IPR029151 Periplasmic sensor-like domain superfamily ALE3EI_1662 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_1662 IPR015387 LuxQ, periplasmic ALE3EI_1662 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1662 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_1662 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_1664 IPR013785 Aldolase-type TIM barrel ALE3EI_1664 IPR006269 3-deoxy-8-phosphooctulonate synthase ALE3EI_1664 IPR006218 DAHP synthetase I/KDSA ALE3EI_1665 IPR035651 BipA, domain V ALE3EI_1665 IPR035647 EF-G domain III/V-like ALE3EI_1665 IPR000640 Elongation factor EFG, domain V-like ALE3EI_1665 IPR004161 Translation elongation factor EFTu-like, domain 2 ALE3EI_1665 IPR031157 Tr-type G domain, conserved site ALE3EI_1665 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1665 IPR005225 Small GTP-binding protein domain ALE3EI_1665 IPR000795 Transcription factor, GTP-binding domain ALE3EI_1665 IPR009000 Translation protein, beta-barrel domain superfamily ALE3EI_1665 IPR041095 Elongation Factor G, domain II ALE3EI_1665 IPR006298 GTP-binding protein TypA ALE3EI_1665 IPR042116 GTP-binding protein TypA/BipA, C-terminal ALE3EI_1672 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_1672 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_1672 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_1672 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ALE3EI_1676 IPR001296 Glycosyl transferase, family 1 ALE3EI_1676 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALE3EI_1677 IPR011051 RmlC-like cupin domain superfamily ALE3EI_1677 IPR014710 RmlC-like jelly roll fold ALE3EI_1677 IPR008894 WxcM-like, C-terminal ALE3EI_1678 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_1678 IPR001173 Glycosyltransferase 2-like ALE3EI_1680 IPR023827 Peptidase S8, subtilisin, Asp-active site ALE3EI_1680 IPR036852 Peptidase S8/S53 domain superfamily ALE3EI_1680 IPR023828 Peptidase S8, subtilisin, Ser-active site ALE3EI_1680 IPR015500 Peptidase S8, subtilisin-related ALE3EI_1680 IPR022398 Peptidase S8, subtilisin, His-active site ALE3EI_1680 IPR000209 Peptidase S8/S53 domain ALE3EI_1680 IPR034084 Thermitase-like, domain ALE3EI_1682 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1682 IPR005286 Cell division protein FtsE, ATP-binding ALE3EI_1682 IPR017871 ABC transporter, conserved site ALE3EI_1682 IPR003593 AAA+ ATPase domain ALE3EI_1682 IPR003439 ABC transporter-like ALE3EI_1687 IPR033932 YtcJ like ALE3EI_1687 IPR011059 Metal-dependent hydrolase, composite domain superfamily ALE3EI_1687 IPR032466 Metal-dependent hydrolase ALE3EI_1687 IPR013108 Amidohydrolase 3 ALE3EI_1694 IPR008302 Uncharacterised conserved protein UCP016719 ALE3EI_1695 IPR003838 ABC transporter permease protein domain ALE3EI_1695 IPR025857 MacB-like periplasmic core domain ALE3EI_1696 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALE3EI_1696 IPR001926 Pyridoxal-phosphate dependent enzyme ALE3EI_1696 IPR000644 CBS domain ALE3EI_1696 IPR005857 Cystathionine beta-synthase ALE3EI_1700 IPR003148 Regulator of K+ conductance, N-terminal ALE3EI_1700 IPR013099 Potassium channel domain ALE3EI_1700 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1701 IPR001463 Sodium:alanine symporter ALE3EI_1703 IPR006089 Acyl-CoA dehydrogenase, conserved site ALE3EI_1703 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ALE3EI_1703 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ALE3EI_1703 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ALE3EI_1703 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ALE3EI_1703 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ALE3EI_1703 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ALE3EI_1705 IPR038380 Ribosomal protein S21 superfamily ALE3EI_1705 IPR001911 Ribosomal protein S21 ALE3EI_1707 IPR034694 Ribosome hibernation promoting factor, long/plastid ALE3EI_1707 IPR003489 Ribosome hibernation promoting factor/RaiA ALE3EI_1707 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal ALE3EI_1707 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily ALE3EI_1707 IPR036567 Ribosome hibernation promotion factor-like ALE3EI_1708 IPR004161 Translation elongation factor EFTu-like, domain 2 ALE3EI_1708 IPR033720 Elongation factor Tu, domain 2 ALE3EI_1708 IPR005225 Small GTP-binding protein domain ALE3EI_1708 IPR000795 Transcription factor, GTP-binding domain ALE3EI_1708 IPR009000 Translation protein, beta-barrel domain superfamily ALE3EI_1708 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ALE3EI_1708 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle ALE3EI_1708 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ALE3EI_1708 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1708 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain ALE3EI_1708 IPR031157 Tr-type G domain, conserved site ALE3EI_1709 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit ALE3EI_1709 IPR038379 SecE superfamily ALE3EI_1709 IPR005807 SecE subunit of protein translocation complex, bacterial-like ALE3EI_1710 IPR014722 Ribosomal protein L2, domain 2 ALE3EI_1710 IPR001062 Transcription antitermination protein, NusG ALE3EI_1710 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site ALE3EI_1710 IPR036735 NusG, N-terminal domain superfamily ALE3EI_1710 IPR008991 Translation protein SH3-like domain superfamily ALE3EI_1710 IPR006645 NusG, N-terminal ALE3EI_1710 IPR005824 KOW ALE3EI_1711 IPR020785 Ribosomal protein L11, conserved site ALE3EI_1711 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ALE3EI_1711 IPR020783 Ribosomal protein L11, C-terminal ALE3EI_1711 IPR006519 Ribosomal protein L11, bacterial-type ALE3EI_1711 IPR000911 Ribosomal protein L11/L12 ALE3EI_1711 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ALE3EI_1711 IPR020784 Ribosomal protein L11, N-terminal ALE3EI_1712 IPR005878 Ribosomal protein L1, bacterial-type ALE3EI_1712 IPR023674 Ribosomal protein L1-like ALE3EI_1712 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein ALE3EI_1712 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich ALE3EI_1712 IPR002143 Ribosomal protein L1 ALE3EI_1712 IPR023673 Ribosomal protein L1, conserved site ALE3EI_1713 IPR001790 Ribosomal protein L10P ALE3EI_1713 IPR022973 Ribosomal protein L10 ALE3EI_1714 IPR013823 Ribosomal protein L7/L12, C-terminal ALE3EI_1714 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily ALE3EI_1714 IPR000206 Ribosomal protein L7/L12 ALE3EI_1714 IPR008932 Ribosomal protein L7/L12, oligomerisation ALE3EI_1714 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ALE3EI_1715 IPR007641 RNA polymerase Rpb2, domain 7 ALE3EI_1715 IPR007644 RNA polymerase, beta subunit, protrusion ALE3EI_1715 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain ALE3EI_1715 IPR015712 DNA-directed RNA polymerase, subunit 2 ALE3EI_1715 IPR014724 RNA polymerase Rpb2, OB-fold ALE3EI_1715 IPR007642 RNA polymerase Rpb2, domain 2 ALE3EI_1715 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type ALE3EI_1715 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily ALE3EI_1715 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain ALE3EI_1715 IPR007121 RNA polymerase, beta subunit, conserved site ALE3EI_1715 IPR007645 RNA polymerase Rpb2, domain 3 ALE3EI_1716 IPR007080 RNA polymerase Rpb1, domain 1 ALE3EI_1716 IPR042102 RNA polymerase Rpb1, domain 3 superfamily ALE3EI_1716 IPR007066 RNA polymerase Rpb1, domain 3 ALE3EI_1716 IPR038120 RNA polymerase Rpb1, funnel domain superfamily ALE3EI_1716 IPR007081 RNA polymerase Rpb1, domain 5 ALE3EI_1716 IPR007083 RNA polymerase Rpb1, domain 4 ALE3EI_1716 IPR006592 RNA polymerase, N-terminal ALE3EI_1716 IPR000722 RNA polymerase, alpha subunit ALE3EI_1716 IPR012754 DNA-directed RNA polymerase, subunit beta-prime ALE3EI_1720 IPR032090 Peptide chain release factor 3, C-terminal ALE3EI_1720 IPR035647 EF-G domain III/V-like ALE3EI_1720 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily ALE3EI_1720 IPR031157 Tr-type G domain, conserved site ALE3EI_1720 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1720 IPR004548 Peptide chain release factor 3 ALE3EI_1720 IPR009000 Translation protein, beta-barrel domain superfamily ALE3EI_1720 IPR004161 Translation elongation factor EFTu-like, domain 2 ALE3EI_1720 IPR005225 Small GTP-binding protein domain ALE3EI_1720 IPR041732 Peptide chain release factor 3, GTP-binding domain ALE3EI_1720 IPR000795 Transcription factor, GTP-binding domain ALE3EI_1724 IPR006244 Photosystem I PsaB ALE3EI_1724 IPR006664 Outer membrane protein, bacterial ALE3EI_1724 IPR036408 Photosystem I PsaA/PsaB superfamily ALE3EI_1724 IPR006665 OmpA-like domain ALE3EI_1724 IPR036737 OmpA-like domain superfamily ALE3EI_1724 IPR001280 Photosystem I PsaA/PsaB ALE3EI_1724 IPR020586 Photosystem I PsaA/PsaB, conserved site ALE3EI_1725 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 ALE3EI_1725 IPR000086 NUDIX hydrolase domain ALE3EI_1725 IPR015797 NUDIX hydrolase-like domain superfamily ALE3EI_1727 IPR011051 RmlC-like cupin domain superfamily ALE3EI_1727 IPR014710 RmlC-like jelly roll fold ALE3EI_1727 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form ALE3EI_1727 IPR001250 Mannose-6-phosphate isomerase, type I ALE3EI_1736 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_1736 IPR020575 Heat shock protein Hsp90, N-terminal ALE3EI_1736 IPR001404 Heat shock protein Hsp90 family ALE3EI_1736 IPR019805 Heat shock protein Hsp90, conserved site ALE3EI_1736 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1737 IPR029058 Alpha/Beta hydrolase fold ALE3EI_1737 IPR011659 WD40-like Beta Propeller ALE3EI_1737 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ALE3EI_1737 IPR002469 Dipeptidylpeptidase IV, N-terminal domain ALE3EI_1737 IPR011042 Six-bladed beta-propeller, TolB-like ALE3EI_1738 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALE3EI_1738 IPR016039 Thiolase-like ALE3EI_1738 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 ALE3EI_1738 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal ALE3EI_1741 IPR038377 Sodium/glucose symporter superfamily ALE3EI_1741 IPR001734 Sodium/solute symporter ALE3EI_1743 IPR000093 DNA recombination protein RecR ALE3EI_1743 IPR023627 Recombination protein RecR ALE3EI_1743 IPR023628 Recombination protein RecR, C4-type zinc finger ALE3EI_1743 IPR006171 TOPRIM domain ALE3EI_1743 IPR034137 RecR, TOPRIM domain ALE3EI_1744 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_1745 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain ALE3EI_1745 IPR004167 Peripheral subunit-binding domain ALE3EI_1745 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ALE3EI_1745 IPR000089 Biotin/lipoyl attachment ALE3EI_1745 IPR014276 2-oxoglutarate dehydrogenase, E2 component ALE3EI_1745 IPR011053 Single hybrid motif ALE3EI_1745 IPR036625 E3-binding domain superfamily ALE3EI_1745 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ALE3EI_1747 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain ALE3EI_1747 IPR012337 Ribonuclease H-like superfamily ALE3EI_1747 IPR036397 Ribonuclease H superfamily ALE3EI_1747 IPR013520 Exonuclease, RNase T/DNA polymerase III ALE3EI_1747 IPR006309 DNA polymerase 3, epsilon subunit ALE3EI_1748 IPR011234 Fumarylacetoacetase-like, C-terminal ALE3EI_1748 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ALE3EI_1750 IPR036425 MoaB/Mog-like domain superfamily ALE3EI_1750 IPR001453 MoaB/Mog domain ALE3EI_1750 IPR041424 CinA, KH domain ALE3EI_1750 IPR008135 Competence-induced protein CinA ALE3EI_1750 IPR008136 CinA, C-terminal ALE3EI_1750 IPR036653 CinA-like, C-terminal ALE3EI_1751 IPR034704 L28p-like ALE3EI_1751 IPR026569 Ribosomal protein L28/L24 ALE3EI_1751 IPR037147 Ribosomal protein L28/L24 superfamily ALE3EI_1751 IPR001383 Ribosomal protein L28 ALE3EI_1752 IPR001705 Ribosomal protein L33 ALE3EI_1752 IPR038584 Ribosomal protein L33 superfamily ALE3EI_1752 IPR011332 Zinc-binding ribosomal protein ALE3EI_1754 IPR004390 Signal-recognition particle receptor FtsY ALE3EI_1754 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain ALE3EI_1754 IPR036225 SRP/SRP receptor, N-terminal ALE3EI_1754 IPR013822 Signal recognition particle SRP54, helical bundle ALE3EI_1754 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily ALE3EI_1754 IPR003593 AAA+ ATPase domain ALE3EI_1754 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1756 IPR013848 Methylthiotransferase, N-terminal ALE3EI_1756 IPR005839 Methylthiotransferase ALE3EI_1756 IPR006638 Elp3/MiaB/NifB ALE3EI_1756 IPR020612 Methylthiotransferase, conserved site ALE3EI_1756 IPR038135 Methylthiotransferase, N-terminal domain superfamily ALE3EI_1756 IPR005840 Ribosomal protein S12 methylthiotransferase RimO ALE3EI_1756 IPR041582 RimO, TRAM domain ALE3EI_1756 IPR007197 Radical SAM ALE3EI_1756 IPR023404 Radical SAM, alpha/beta horseshoe ALE3EI_1756 IPR002792 TRAM domain ALE3EI_1763 IPR011199 Bacillithiol biosynthesis BshC ALE3EI_1764 IPR011761 ATP-grasp fold ALE3EI_1764 IPR016185 Pre-ATP-grasp domain superfamily ALE3EI_1764 IPR004215 Prokaryotic glutathione synthetase, N-terminal ALE3EI_1764 IPR004218 Prokaryotic glutathione synthetase, ATP-binding ALE3EI_1764 IPR006284 Glutathione synthetase, prokaryotic ALE3EI_1764 IPR013815 ATP-grasp fold, subdomain 1 ALE3EI_1766 IPR001674 GMP synthase, C-terminal ALE3EI_1766 IPR017926 Glutamine amidotransferase ALE3EI_1766 IPR029062 Class I glutamine amidotransferase-like ALE3EI_1766 IPR022955 GMP synthase ALE3EI_1766 IPR004739 GMP synthase, glutamine amidotransferase ALE3EI_1766 IPR025777 GMP synthetase ATP pyrophosphatase domain ALE3EI_1766 IPR022310 NAD/GMP synthase ALE3EI_1766 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_1770 IPR024530 Putative quorum-sensing-regulated virulence factor ALE3EI_1771 IPR029062 Class I glutamine amidotransferase-like ALE3EI_1771 IPR004468 CTP synthase ALE3EI_1771 IPR017456 CTP synthase, N-terminal ALE3EI_1771 IPR017926 Glutamine amidotransferase ALE3EI_1771 IPR033828 CTP synthase GATase domain ALE3EI_1771 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1772 IPR038210 Membrane insertase YidC, periplasmic domain ALE3EI_1772 IPR038221 YidC, periplasmic domain superfamily ALE3EI_1772 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 ALE3EI_1772 IPR028055 Membrane insertase YidC/Oxa1, C-terminal ALE3EI_1772 IPR019998 Membrane insertase YidC ALE3EI_1772 IPR028053 Membrane insertase YidC, N-terminal ALE3EI_1774 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_1774 IPR004506 tRNA-specific 2-thiouridylase ALE3EI_1774 IPR023382 Adenine nucleotide alpha hydrolase-like domains ALE3EI_1775 IPR023827 Peptidase S8, subtilisin, Asp-active site ALE3EI_1775 IPR015500 Peptidase S8, subtilisin-related ALE3EI_1775 IPR022398 Peptidase S8, subtilisin, His-active site ALE3EI_1775 IPR023828 Peptidase S8, subtilisin, Ser-active site ALE3EI_1775 IPR000209 Peptidase S8/S53 domain ALE3EI_1775 IPR036852 Peptidase S8/S53 domain superfamily ALE3EI_1776 IPR013785 Aldolase-type TIM barrel ALE3EI_1776 IPR004136 Nitronate monooxygenase ALE3EI_1780 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ALE3EI_1780 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal ALE3EI_1780 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal ALE3EI_1780 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ALE3EI_1780 IPR000183 Ornithine/DAP/Arg decarboxylase ALE3EI_1780 IPR002986 Diaminopimelate decarboxylase, LysA ALE3EI_1780 IPR029066 PLP-binding barrel ALE3EI_1780 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal ALE3EI_1781 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type ALE3EI_1781 IPR005809 Succinate--CoA synthetase, beta subunit ALE3EI_1781 IPR005811 ATP-citrate lyase/succinyl-CoA ligase ALE3EI_1781 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site ALE3EI_1781 IPR016102 Succinyl-CoA synthetase-like ALE3EI_1781 IPR013815 ATP-grasp fold, subdomain 1 ALE3EI_1784 IPR018723 Protein of unknown function DUF2254, membrane ALE3EI_1785 IPR002068 Alpha crystallin/Hsp20 domain ALE3EI_1785 IPR008978 HSP20-like chaperone ALE3EI_1786 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain ALE3EI_1786 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site ALE3EI_1786 IPR020103 Pseudouridine synthase, catalytic domain superfamily ALE3EI_1786 IPR006145 Pseudouridine synthase, RsuA/RluA ALE3EI_1786 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F ALE3EI_1786 IPR002942 RNA-binding S4 domain ALE3EI_1786 IPR036986 RNA-binding S4 domain superfamily ALE3EI_1789 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_1789 IPR001650 Helicase, C-terminal ALE3EI_1789 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1789 IPR001943 UVR domain ALE3EI_1789 IPR036876 UVR domain superfamily ALE3EI_1789 IPR004807 UvrABC system, subunit B ALE3EI_1789 IPR041471 UvrB, interaction domain ALE3EI_1789 IPR024759 UvrB, YAD/RRR-motif-containing domain ALE3EI_1789 IPR006935 Helicase/UvrB, N-terminal ALE3EI_1791 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal ALE3EI_1791 IPR023506 Trans-aconitate 2-methyltransferase ALE3EI_1791 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_1791 IPR041698 Methyltransferase domain 25 ALE3EI_1795 IPR003593 AAA+ ATPase domain ALE3EI_1795 IPR003439 ABC transporter-like ALE3EI_1795 IPR017871 ABC transporter, conserved site ALE3EI_1795 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1799 IPR023755 Heme A synthase, type 1 ALE3EI_1799 IPR003780 COX15/CtaA family ALE3EI_1801 IPR038763 DHH phosphoesterase superfamily ALE3EI_1801 IPR002646 Poly A polymerase, head domain ALE3EI_1801 IPR001667 DDH domain ALE3EI_1801 IPR000644 CBS domain ALE3EI_1801 IPR003156 DHHA1 domain ALE3EI_1802 IPR006070 YrdC-like domain ALE3EI_1802 IPR023535 Threonylcarbamoyl-AMP synthase ALE3EI_1802 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ALE3EI_1805 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_1805 IPR001173 Glycosyltransferase 2-like ALE3EI_1808 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_1808 IPR001173 Glycosyltransferase 2-like ALE3EI_1811 IPR001173 Glycosyltransferase 2-like ALE3EI_1811 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_1812 IPR004498 Ribosomal protein L11 methyltransferase ALE3EI_1812 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_1815 IPR011004 Trimeric LpxA-like superfamily ALE3EI_1815 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily ALE3EI_1815 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 ALE3EI_1815 IPR018357 Hexapeptide transferase, conserved site ALE3EI_1815 IPR001451 Hexapeptide repeat ALE3EI_1815 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family ALE3EI_1816 IPR012337 Ribonuclease H-like superfamily ALE3EI_1816 IPR005227 Putative pre-16S rRNA nuclease ALE3EI_1816 IPR006641 YqgF/RNase H-like domain ALE3EI_1816 IPR037027 YqgF/RNase H-like domain superfamily ALE3EI_1817 IPR023635 Peptide deformylase ALE3EI_1817 IPR036821 Peptide deformylase superfamily ALE3EI_1819 IPR011551 NTP pyrophosphohydrolase MazG ALE3EI_1819 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ALE3EI_1822 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1822 IPR011342 Shikimate dehydrogenase ALE3EI_1822 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal ALE3EI_1822 IPR022893 Shikimate dehydrogenase family ALE3EI_1822 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ALE3EI_1822 IPR041121 SDH, C-terminal ALE3EI_1826 IPR004636 Acetylornithine/Succinylornithine transaminase family ALE3EI_1826 IPR005814 Aminotransferase class-III ALE3EI_1826 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_1826 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_1826 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_1828 IPR042110 Adenylosuccinate synthetase, domain 2 ALE3EI_1828 IPR018220 Adenylosuccinate synthase, GTP-binding site ALE3EI_1828 IPR033128 Adenylosuccinate synthase, active site ALE3EI_1828 IPR042109 Adenylosuccinate synthetase, domain 1 ALE3EI_1828 IPR042111 Adenylosuccinate synthetase, domain 3 ALE3EI_1828 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1828 IPR001114 Adenylosuccinate synthetase ALE3EI_1829 IPR002481 Ferric-uptake regulator ALE3EI_1829 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_1829 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_1830 IPR002912 ACT domain ALE3EI_1830 IPR012675 Beta-grasp domain superfamily ALE3EI_1830 IPR004811 RelA/SpoT family ALE3EI_1830 IPR003607 HD/PDEase domain ALE3EI_1830 IPR033655 RelA, TGS domain ALE3EI_1830 IPR007685 RelA/SpoT ALE3EI_1830 IPR004095 TGS ALE3EI_1830 IPR012676 TGS-like ALE3EI_1831 IPR032456 CAAX prenyl protease 1, N-terminal ALE3EI_1831 IPR001915 Peptidase M48 ALE3EI_1831 IPR027057 CAAX prenyl protease 1 ALE3EI_1833 IPR029028 Alpha/beta knot methyltransferases ALE3EI_1833 IPR029064 50S ribosomal protein L30e-like ALE3EI_1833 IPR001537 tRNA/rRNA methyltransferase, SpoU type ALE3EI_1833 IPR013123 RNA 2-O ribose methyltransferase, substrate binding ALE3EI_1833 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALE3EI_1837 IPR032466 Metal-dependent hydrolase ALE3EI_1837 IPR004722 Dihydroorotase ALE3EI_1837 IPR002195 Dihydroorotase, conserved site ALE3EI_1837 IPR011059 Metal-dependent hydrolase, composite domain superfamily ALE3EI_1837 IPR006680 Amidohydrolase-related ALE3EI_1839 IPR002933 Peptidase M20 ALE3EI_1839 IPR001160 Peptidase M20C, Xaa-His dipeptidase ALE3EI_1839 IPR011650 Peptidase M20, dimerisation domain ALE3EI_1840 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain ALE3EI_1840 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site ALE3EI_1840 IPR029000 Cyclophilin-like domain superfamily ALE3EI_1842 IPR001667 DDH domain ALE3EI_1842 IPR038763 DHH phosphoesterase superfamily ALE3EI_1842 IPR003156 DHHA1 domain ALE3EI_1843 IPR001564 Nucleoside diphosphate kinase ALE3EI_1843 IPR036850 Nucleoside diphosphate kinase-like domain superfamily ALE3EI_1843 IPR034907 Nucleoside diphosphate kinase-like domain ALE3EI_1846 IPR018078 DNA-binding, RecF, conserved site ALE3EI_1846 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1846 IPR001238 DNA-binding, RecF ALE3EI_1846 IPR003395 RecF/RecN/SMC, N-terminal ALE3EI_1846 IPR042174 DNA-binding RecF, domain 2 ALE3EI_1848 IPR036467 Lumazine/riboflavin synthase superfamily ALE3EI_1848 IPR002180 Lumazine/riboflavin synthase ALE3EI_1848 IPR034964 Lumazine synthase ALE3EI_1850 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALE3EI_1850 IPR014762 DNA mismatch repair, conserved site ALE3EI_1850 IPR020667 DNA mismatch repair protein, MutL ALE3EI_1850 IPR002099 DNA mismatch repair protein family, N-terminal ALE3EI_1850 IPR013507 DNA mismatch repair protein, S5 domain 2-like ALE3EI_1850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1850 IPR014790 MutL, C-terminal, dimerisation ALE3EI_1850 IPR037198 MutL, C-terminal domain superfamily ALE3EI_1850 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms ALE3EI_1850 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_1850 IPR042121 MutL, C-terminal domain, regulatory subdomain ALE3EI_1850 IPR042120 MutL, C-terminal domain, dimerisation subdomain ALE3EI_1855 IPR036286 LexA/Signal peptidase-like superfamily ALE3EI_1855 IPR000223 Peptidase S26A, signal peptidase I ALE3EI_1855 IPR019758 Peptidase S26A, signal peptidase I, conserved site ALE3EI_1855 IPR019757 Peptidase S26A, signal peptidase I, lysine active site ALE3EI_1855 IPR019756 Peptidase S26A, signal peptidase I, serine active site ALE3EI_1855 IPR019533 Peptidase S26 ALE3EI_1856 IPR000846 Dihydrodipicolinate reductase, N-terminal ALE3EI_1856 IPR022663 Dihydrodipicolinate reductase, C-terminal ALE3EI_1856 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1856 IPR023940 Dihydrodipicolinate reductase ALE3EI_1856 IPR022664 Dihydrodipicolinate reductase, conserved site ALE3EI_1858 IPR004437 ParB/RepB/Spo0J partition protein ALE3EI_1858 IPR041468 ParB/Spo0J, HTH domain ALE3EI_1858 IPR036086 ParB/Sulfiredoxin superfamily ALE3EI_1858 IPR003115 ParB/Sulfiredoxin ALE3EI_1859 IPR025669 AAA domain ALE3EI_1859 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1861 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1861 IPR002347 Short-chain dehydrogenase/reductase SDR ALE3EI_1863 IPR006158 Cobalamin (vitamin B12)-binding domain ALE3EI_1863 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic ALE3EI_1863 IPR036724 Cobalamin-binding domain superfamily ALE3EI_1863 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic ALE3EI_1863 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic ALE3EI_1863 IPR006159 Methylmalonyl-CoA mutase, C-terminal ALE3EI_1865 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic ALE3EI_1865 IPR036724 Cobalamin-binding domain superfamily ALE3EI_1865 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic ALE3EI_1865 IPR004608 Methylmalonyl-CoA mutase, beta chain ALE3EI_1867 IPR000764 Uridine kinase-like ALE3EI_1867 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1867 IPR026008 Uridine kinase ALE3EI_1867 IPR006083 Phosphoribulokinase/uridine kinase ALE3EI_1868 IPR036909 Cytochrome c-like domain superfamily ALE3EI_1868 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit ALE3EI_1868 IPR008168 Cytochrome c, class IC ALE3EI_1868 IPR009056 Cytochrome c-like domain ALE3EI_1869 IPR011042 Six-bladed beta-propeller, TolB-like ALE3EI_1869 IPR012938 Glucose/Sorbosone dehydrogenase ALE3EI_1869 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase ALE3EI_1872 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ALE3EI_1872 IPR006037 Regulator of K+ conductance, C-terminal ALE3EI_1872 IPR031312 Sodium/sulphate symporter, conserved site ALE3EI_1872 IPR004680 Citrate transporter-like domain ALE3EI_1874 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site ALE3EI_1874 IPR005982 Thioredoxin reductase ALE3EI_1874 IPR023753 FAD/NAD(P)-binding domain ALE3EI_1874 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_1887 IPR005119 LysR, substrate-binding ALE3EI_1887 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_1887 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_1887 IPR000847 Transcription regulator HTH, LysR ALE3EI_1889 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1889 IPR041628 ChlI/MoxR, AAA lid domain ALE3EI_1889 IPR011703 ATPase, AAA-3 ALE3EI_1895 IPR005115 Uncharacterised domain UPF0126 ALE3EI_1896 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site ALE3EI_1896 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain ALE3EI_1896 IPR029000 Cyclophilin-like domain superfamily ALE3EI_1901 IPR023753 FAD/NAD(P)-binding domain ALE3EI_1901 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_1903 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1903 IPR029787 Nucleotide cyclase ALE3EI_1903 IPR011006 CheY-like superfamily ALE3EI_1903 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase ALE3EI_1904 IPR016786 Uncharacterised protein YdeI, bacterial ALE3EI_1904 IPR014922 Domain of unknown function DUF1801 ALE3EI_1909 IPR029016 GAF-like domain superfamily ALE3EI_1909 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_1909 IPR010559 Signal transduction histidine kinase, internal region ALE3EI_1909 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region ALE3EI_1909 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_1912 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_1912 IPR007492 LytTR DNA-binding domain ALE3EI_1912 IPR011006 CheY-like superfamily ALE3EI_1913 IPR023576 UbiE/COQ5 methyltransferase, conserved site ALE3EI_1913 IPR004033 UbiE/COQ5 methyltransferase ALE3EI_1913 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_1919 IPR039425 RNA polymerase sigma-70 like ALE3EI_1919 IPR014284 RNA polymerase sigma-70 like domain ALE3EI_1919 IPR013325 RNA polymerase sigma factor, region 2 ALE3EI_1919 IPR014296 RNA polymerase sigma-M, bacillaceae ALE3EI_1919 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ALE3EI_1919 IPR007627 RNA polymerase sigma-70 region 2 ALE3EI_1919 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ALE3EI_1919 IPR013324 RNA polymerase sigma factor, region 3/4-like ALE3EI_1919 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_1925 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ALE3EI_1925 IPR029058 Alpha/Beta hydrolase fold ALE3EI_1925 IPR011042 Six-bladed beta-propeller, TolB-like ALE3EI_1928 IPR036779 LysM domain superfamily ALE3EI_1928 IPR018392 LysM domain ALE3EI_1928 IPR014004 Transport-associated and nodulation domain, bacteria ALE3EI_1928 IPR007055 BON domain ALE3EI_1929 IPR000782 FAS1 domain ALE3EI_1929 IPR036378 FAS1 domain superfamily ALE3EI_1930 IPR032466 Metal-dependent hydrolase ALE3EI_1930 IPR005920 Imidazolonepropionase ALE3EI_1930 IPR011059 Metal-dependent hydrolase, composite domain superfamily ALE3EI_1930 IPR006680 Amidohydrolase-related ALE3EI_1931 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal ALE3EI_1931 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ALE3EI_1931 IPR001206 Diacylglycerol kinase, catalytic domain ALE3EI_1931 IPR022433 Lipid kinase YegS ALE3EI_1931 IPR005218 Diacylglycerol/lipid kinase ALE3EI_1935 IPR007280 Peptidase, C-terminal, archaeal/bacterial ALE3EI_1935 IPR012189 Peptidase M28E, aminopeptidase AP1 ALE3EI_1935 IPR007484 Peptidase M28 ALE3EI_1939 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ALE3EI_1939 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ALE3EI_1939 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ALE3EI_1939 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ALE3EI_1939 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ALE3EI_1939 IPR006089 Acyl-CoA dehydrogenase, conserved site ALE3EI_1939 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ALE3EI_1940 IPR020617 Thiolase, C-terminal ALE3EI_1940 IPR020613 Thiolase, conserved site ALE3EI_1940 IPR020616 Thiolase, N-terminal ALE3EI_1940 IPR020610 Thiolase, active site ALE3EI_1940 IPR020615 Thiolase, acyl-enzyme intermediate active site ALE3EI_1940 IPR002155 Thiolase ALE3EI_1940 IPR016039 Thiolase-like ALE3EI_1941 IPR036291 NAD(P)-binding domain superfamily ALE3EI_1941 IPR001753 Enoyl-CoA hydratase/isomerase ALE3EI_1941 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_1941 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ALE3EI_1941 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ALE3EI_1941 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal ALE3EI_1941 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ALE3EI_1943 IPR020845 AMP-binding, conserved site ALE3EI_1943 IPR042099 AMP-dependent synthetase-like superfamily ALE3EI_1943 IPR000873 AMP-dependent synthetase/ligase ALE3EI_1944 IPR008757 Peptidase M6-like, domain ALE3EI_1944 IPR012300 Peptidase M6, InhA ALE3EI_1945 IPR029062 Class I glutamine amidotransferase-like ALE3EI_1945 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal ALE3EI_1945 IPR017926 Glutamine amidotransferase ALE3EI_1945 IPR010073 Phosphoribosylformylglycinamidine synthase PurL ALE3EI_1945 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain ALE3EI_1945 IPR010918 PurM-like, C-terminal domain ALE3EI_1945 IPR036676 PurM-like, C-terminal domain superfamily ALE3EI_1945 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily ALE3EI_1945 IPR036921 PurM-like, N-terminal domain superfamily ALE3EI_1948 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site ALE3EI_1948 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae ALE3EI_1948 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type ALE3EI_1948 IPR004573 rRNA small subunit methyltransferase B ALE3EI_1948 IPR023267 RNA (C5-cytosine) methyltransferase ALE3EI_1948 IPR006027 NusB/RsmB/TIM44 ALE3EI_1948 IPR035926 NusB-like superfamily ALE3EI_1948 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_1952 IPR039425 RNA polymerase sigma-70 like ALE3EI_1952 IPR014284 RNA polymerase sigma-70 like domain ALE3EI_1952 IPR007627 RNA polymerase sigma-70 region 2 ALE3EI_1952 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ALE3EI_1952 IPR014286 RNA polymerase sigma-70 RpoE type ALE3EI_1952 IPR013325 RNA polymerase sigma factor, region 2 ALE3EI_1952 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_1952 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ALE3EI_1952 IPR013324 RNA polymerase sigma factor, region 3/4-like ALE3EI_1953 IPR011917 ABC transporter, lipid A export, MsbA ALE3EI_1953 IPR036640 ABC transporter type 1, transmembrane domain superfamily ALE3EI_1953 IPR011527 ABC transporter type 1, transmembrane domain ALE3EI_1953 IPR003439 ABC transporter-like ALE3EI_1953 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1953 IPR039421 Type I protein exporter ALE3EI_1953 IPR003593 AAA+ ATPase domain ALE3EI_1953 IPR017871 ABC transporter, conserved site ALE3EI_1954 IPR005841 Alpha-D-phosphohexomutase superfamily ALE3EI_1954 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III ALE3EI_1954 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II ALE3EI_1954 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily ALE3EI_1954 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III ALE3EI_1954 IPR016066 Alpha-D-phosphohexomutase, conserved site ALE3EI_1954 IPR005843 Alpha-D-phosphohexomutase, C-terminal ALE3EI_1954 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I ALE3EI_1955 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase ALE3EI_1955 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_1955 IPR001173 Glycosyltransferase 2-like ALE3EI_1957 IPR002150 Ribosomal protein L31 ALE3EI_1957 IPR027493 Ribosomal protein L31 type B ALE3EI_1957 IPR034704 L28p-like ALE3EI_1957 IPR042105 Ribosomal protein L31 superfamily ALE3EI_1962 IPR039424 Solute-binding protein family 5 ALE3EI_1962 IPR023765 Solute-binding protein family 5, conserved site ALE3EI_1962 IPR000914 Solute-binding protein family 5 domain ALE3EI_1962 IPR030678 Peptide/nickel binding protein, MppA-type ALE3EI_1964 IPR006467 MiaB-like tRNA modifying enzyme ALE3EI_1964 IPR007197 Radical SAM ALE3EI_1964 IPR023404 Radical SAM, alpha/beta horseshoe ALE3EI_1964 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase ALE3EI_1964 IPR002792 TRAM domain ALE3EI_1964 IPR006638 Elp3/MiaB/NifB ALE3EI_1964 IPR005839 Methylthiotransferase ALE3EI_1964 IPR020612 Methylthiotransferase, conserved site ALE3EI_1964 IPR013848 Methylthiotransferase, N-terminal ALE3EI_1964 IPR038135 Methylthiotransferase, N-terminal domain superfamily ALE3EI_1971 IPR000271 Ribosomal protein L34 ALE3EI_1971 IPR020939 Ribosomal protein L34, conserved site ALE3EI_1972 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain ALE3EI_1972 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain ALE3EI_1972 IPR016185 Pre-ATP-grasp domain superfamily ALE3EI_1972 IPR011761 ATP-grasp fold ALE3EI_1972 IPR036914 Methylglyoxal synthase-like domain superfamily ALE3EI_1972 IPR011607 Methylglyoxal synthase-like domain ALE3EI_1972 IPR006275 Carbamoyl-phosphate synthase, large subunit ALE3EI_1972 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily ALE3EI_1972 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain ALE3EI_1972 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain ALE3EI_1975 IPR003798 DNA recombination RmuC ALE3EI_1976 IPR003439 ABC transporter-like ALE3EI_1976 IPR003593 AAA+ ATPase domain ALE3EI_1976 IPR017871 ABC transporter, conserved site ALE3EI_1976 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1977 IPR037294 ABC transporter, BtuC-like ALE3EI_1977 IPR000522 ABC transporter, permease protein, BtuC-like ALE3EI_1979 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_1979 IPR012910 TonB-dependent receptor, plug domain ALE3EI_1979 IPR039426 Vitamin B12 transporter BtuB-like ALE3EI_1979 IPR010916 TonB box, conserved site ALE3EI_1979 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_1979 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor ALE3EI_1979 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ALE3EI_1979 IPR011276 TonB-dependent haem/haemoglobin receptor ALE3EI_1983 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ALE3EI_1983 IPR007627 RNA polymerase sigma-70 region 2 ALE3EI_1983 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ALE3EI_1983 IPR014286 RNA polymerase sigma-70 RpoE type ALE3EI_1983 IPR013325 RNA polymerase sigma factor, region 2 ALE3EI_1983 IPR039425 RNA polymerase sigma-70 like ALE3EI_1983 IPR013324 RNA polymerase sigma factor, region 3/4-like ALE3EI_1983 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_1983 IPR014284 RNA polymerase sigma-70 like domain ALE3EI_1987 IPR022761 Fumarate lyase, N-terminal ALE3EI_1987 IPR020557 Fumarate lyase, conserved site ALE3EI_1987 IPR024083 Fumarase/histidase, N-terminal ALE3EI_1987 IPR013539 Adenylosuccinate lyase PurB, C-terminal ALE3EI_1987 IPR004769 Adenylosuccinate lyase ALE3EI_1987 IPR000362 Fumarate lyase family ALE3EI_1987 IPR008948 L-Aspartase-like ALE3EI_1990 IPR029035 DHS-like NAD/FAD-binding domain superfamily ALE3EI_1990 IPR026590 Sirtuin family, catalytic core domain ALE3EI_1990 IPR003000 Sirtuin family ALE3EI_1990 IPR026591 Sirtuin, catalytic core small domain superfamily ALE3EI_1990 IPR027546 Sirtuin, class III ALE3EI_1991 IPR001537 tRNA/rRNA methyltransferase, SpoU type ALE3EI_1991 IPR029028 Alpha/beta knot methyltransferases ALE3EI_1991 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALE3EI_1991 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase ALE3EI_1994 IPR002637 Ham1-like protein ALE3EI_1994 IPR029001 Inosine triphosphate pyrophosphatase-like ALE3EI_1994 IPR020922 dITP/XTP pyrophosphatase ALE3EI_1995 IPR011545 DEAD/DEAH box helicase domain ALE3EI_1995 IPR028618 ATP-dependent RNA helicase DeaD ALE3EI_1995 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ALE3EI_1995 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain ALE3EI_1995 IPR034415 CsdA, RNA recognition motif ALE3EI_1995 IPR014014 RNA helicase, DEAD-box type, Q motif ALE3EI_1995 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_1995 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ALE3EI_1995 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_1995 IPR001650 Helicase, C-terminal ALE3EI_1997 IPR016161 Aldehyde/histidinol dehydrogenase ALE3EI_1997 IPR016163 Aldehyde dehydrogenase, C-terminal ALE3EI_1997 IPR016160 Aldehyde dehydrogenase, cysteine active site ALE3EI_1997 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ALE3EI_1997 IPR016162 Aldehyde dehydrogenase, N-terminal ALE3EI_1997 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent ALE3EI_1997 IPR015590 Aldehyde dehydrogenase domain ALE3EI_1999 IPR029028 Alpha/beta knot methyltransferases ALE3EI_1999 IPR003742 RNA methyltransferase RlmH ALE3EI_1999 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALE3EI_2000 IPR013785 Aldolase-type TIM barrel ALE3EI_2000 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD ALE3EI_2000 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal ALE3EI_2000 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal ALE3EI_2000 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal ALE3EI_2000 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily ALE3EI_2000 IPR004393 Nicotinate-nucleotide pyrophosphorylase ALE3EI_2004 IPR001650 Helicase, C-terminal ALE3EI_2004 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain ALE3EI_2004 IPR041236 Primosomal protein N, C-terminal domain ALE3EI_2004 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily ALE3EI_2004 IPR041222 Primosomal protein N', 3' DNA-binding domain ALE3EI_2004 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_2004 IPR006935 Helicase/UvrB, N-terminal ALE3EI_2004 IPR005259 Primosomal protein N' ALE3EI_2004 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2005 IPR011006 CheY-like superfamily ALE3EI_2005 IPR007492 LytTR DNA-binding domain ALE3EI_2005 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2006 IPR000529 Ribosomal protein S6 ALE3EI_2006 IPR020814 Ribosomal protein S6, plastid/chloroplast ALE3EI_2006 IPR035980 Ribosomal protein S6 superfamily ALE3EI_2006 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ALE3EI_2007 IPR036870 Ribosomal protein S18 superfamily ALE3EI_2007 IPR001648 Ribosomal protein S18 ALE3EI_2008 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ALE3EI_2008 IPR000244 Ribosomal protein L9 ALE3EI_2008 IPR020594 Ribosomal protein L9, bacteria/chloroplast ALE3EI_2008 IPR020069 Ribosomal protein L9, C-terminal ALE3EI_2008 IPR020070 Ribosomal protein L9, N-terminal ALE3EI_2008 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ALE3EI_2008 IPR036935 Ribosomal protein L9, N-terminal domain superfamily ALE3EI_2010 IPR025857 MacB-like periplasmic core domain ALE3EI_2010 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2010 IPR017871 ABC transporter, conserved site ALE3EI_2010 IPR003439 ABC transporter-like ALE3EI_2010 IPR003838 ABC transporter permease protein domain ALE3EI_2010 IPR003593 AAA+ ATPase domain ALE3EI_2010 IPR017911 ABC transporter, macrolide export, ATP-binding domain ALE3EI_2011 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit ALE3EI_2011 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain ALE3EI_2011 IPR015807 Histidine-tRNA ligase ALE3EI_2011 IPR004154 Anticodon-binding ALE3EI_2011 IPR036621 Anticodon-binding domain superfamily ALE3EI_2011 IPR033656 Histidyl-anticodon-binding ALE3EI_2011 IPR006195 Aminoacyl-tRNA synthetase, class II ALE3EI_2015 IPR006037 Regulator of K+ conductance, C-terminal ALE3EI_2015 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ALE3EI_2015 IPR003148 Regulator of K+ conductance, N-terminal ALE3EI_2015 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2015 IPR006036 Potassium uptake protein TrkA ALE3EI_2020 IPR002068 Alpha crystallin/Hsp20 domain ALE3EI_2020 IPR008978 HSP20-like chaperone ALE3EI_2021 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ALE3EI_2021 IPR017202 Sensor histidine kinase LiaS/VraS ALE3EI_2021 IPR005467 Histidine kinase domain ALE3EI_2021 IPR003660 HAMP domain ALE3EI_2021 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2021 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2024 IPR003774 Protein of unknown function UPF0301 ALE3EI_2025 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily ALE3EI_2025 IPR020816 Histone-like DNA-binding protein, conserved site ALE3EI_2025 IPR000119 Histone-like DNA-binding protein ALE3EI_2026 IPR037022 Formyl transferase, C-terminal domain superfamily ALE3EI_2026 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain ALE3EI_2026 IPR011034 Formyl transferase-like, C-terminal domain superfamily ALE3EI_2026 IPR036477 Formyl transferase, N-terminal domain superfamily ALE3EI_2026 IPR002376 Formyl transferase, N-terminal ALE3EI_2026 IPR005793 Formyl transferase, C-terminal ALE3EI_2026 IPR005794 Methionyl-tRNA formyltransferase ALE3EI_2027 IPR018982 RQC domain ALE3EI_2027 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain ALE3EI_2027 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2027 IPR001650 Helicase, C-terminal ALE3EI_2027 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_2027 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial ALE3EI_2027 IPR002121 HRDC domain ALE3EI_2027 IPR010997 HRDC-like superfamily ALE3EI_2027 IPR011545 DEAD/DEAH box helicase domain ALE3EI_2027 IPR004589 DNA helicase, ATP-dependent, RecQ type ALE3EI_2027 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2031 IPR001986 Enolpyruvate transferase domain ALE3EI_2031 IPR036968 Enolpyruvate transferase domain superfamily ALE3EI_2031 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta ALE3EI_2031 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase ALE3EI_2034 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily ALE3EI_2034 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily ALE3EI_2034 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain ALE3EI_2034 IPR002081 Cryptochrome/DNA photolyase class 1 ALE3EI_2034 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal ALE3EI_2034 IPR006050 DNA photolyase, N-terminal ALE3EI_2034 IPR019947 DNA photolyase class 1, 8-HDF type ALE3EI_2034 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_2036 IPR000425 Major intrinsic protein ALE3EI_2036 IPR034294 Aquaporin transporter ALE3EI_2036 IPR023271 Aquaporin-like ALE3EI_2040 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related ALE3EI_2040 IPR024078 Putative deacetylase LmbE-like domain superfamily ALE3EI_2040 IPR017811 Mycothiol S-conjugate amidase Mca ALE3EI_2043 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein ALE3EI_2043 IPR029001 Inosine triphosphate pyrophosphatase-like ALE3EI_2050 IPR007816 ResB-like domain ALE3EI_2050 IPR002541 Cytochrome c assembly protein ALE3EI_2052 IPR022761 Fumarate lyase, N-terminal ALE3EI_2052 IPR000362 Fumarate lyase family ALE3EI_2052 IPR008948 L-Aspartase-like ALE3EI_2052 IPR018951 Fumarase C, C-terminal ALE3EI_2052 IPR024083 Fumarase/histidase, N-terminal ALE3EI_2052 IPR005677 Fumarate hydratase, class II ALE3EI_2052 IPR020557 Fumarate lyase, conserved site ALE3EI_2054 IPR010105 TonB-dependent siderophore receptor ALE3EI_2054 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ALE3EI_2054 IPR010917 TonB-dependent receptor, conserved site ALE3EI_2054 IPR039426 Vitamin B12 transporter BtuB-like ALE3EI_2054 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_2054 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_2054 IPR012910 TonB-dependent receptor, plug domain ALE3EI_2055 IPR006659 Arsenate reductase ALE3EI_2055 IPR036249 Thioredoxin-like superfamily ALE3EI_2055 IPR006660 Arsenate reductase-like ALE3EI_2057 IPR016181 Acyl-CoA N-acyltransferase ALE3EI_2057 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2057 IPR000835 MarR-type HTH domain ALE3EI_2057 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_2057 IPR000182 GNAT domain ALE3EI_2058 IPR005139 Peptide chain release factor ALE3EI_2058 IPR004374 Peptide chain release factor 2 ALE3EI_2058 IPR000352 Peptide chain release factor class I ALE3EI_2061 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase ALE3EI_2061 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_2061 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_2061 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_2061 IPR023603 Threonine aldolase ALE3EI_2062 IPR010879 Domain of unknown function DUF1508 ALE3EI_2062 IPR036913 YegP-like superfamily ALE3EI_2063 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily ALE3EI_2063 IPR004401 Nucleoid-associated protein YbaB/EbfC family ALE3EI_2064 IPR029058 Alpha/Beta hydrolase fold ALE3EI_2064 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ALE3EI_2064 IPR023302 Peptidase S9A, N-terminal domain ALE3EI_2064 IPR002470 Peptidase S9A, prolyl oligopeptidase ALE3EI_2065 IPR000644 CBS domain ALE3EI_2065 IPR005857 Cystathionine beta-synthase ALE3EI_2065 IPR001926 Pyridoxal-phosphate dependent enzyme ALE3EI_2065 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ALE3EI_2066 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_2066 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type ALE3EI_2066 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type ALE3EI_2066 IPR004839 Aminotransferase, class I/classII ALE3EI_2066 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ALE3EI_2066 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_2066 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_2067 IPR016181 Acyl-CoA N-acyltransferase ALE3EI_2067 IPR039968 Uncharacterized protein YghO-like ALE3EI_2076 IPR003439 ABC transporter-like ALE3EI_2076 IPR041102 UvrA, interaction domain ALE3EI_2076 IPR041552 UvrA DNA-binding domain ALE3EI_2076 IPR004602 UvrABC system subunit A ALE3EI_2076 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2076 IPR017871 ABC transporter, conserved site ALE3EI_2079 IPR004036 Endonuclease III-like, conserved site-2 ALE3EI_2079 IPR003265 HhH-GPD domain ALE3EI_2079 IPR004035 Endonuclease III, iron-sulphur binding site ALE3EI_2079 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif ALE3EI_2079 IPR011257 DNA glycosylase ALE3EI_2079 IPR005759 Endonuclease III ALE3EI_2079 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal ALE3EI_2079 IPR000445 Helix-hairpin-helix motif ALE3EI_2080 IPR036249 Thioredoxin-like superfamily ALE3EI_2080 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant ALE3EI_2080 IPR013766 Thioredoxin domain ALE3EI_2080 IPR024706 Peroxiredoxin, AhpC-type ALE3EI_2082 IPR001279 Metallo-beta-lactamase ALE3EI_2082 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ALE3EI_2087 IPR011059 Metal-dependent hydrolase, composite domain superfamily ALE3EI_2087 IPR006680 Amidohydrolase-related ALE3EI_2087 IPR004722 Dihydroorotase ALE3EI_2087 IPR032466 Metal-dependent hydrolase ALE3EI_2087 IPR002195 Dihydroorotase, conserved site ALE3EI_2089 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_2089 IPR013654 PAS fold-2 ALE3EI_2089 IPR016132 Phytochrome chromophore attachment domain ALE3EI_2089 IPR005467 Histidine kinase domain ALE3EI_2089 IPR029016 GAF-like domain superfamily ALE3EI_2089 IPR003018 GAF domain ALE3EI_2089 IPR001294 Phytochrome ALE3EI_2089 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_2089 IPR035965 PAS domain superfamily ALE3EI_2089 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2089 IPR013515 Phytochrome, central region ALE3EI_2089 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_2090 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2090 IPR005467 Histidine kinase domain ALE3EI_2090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_2090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_2090 IPR000700 PAS-associated, C-terminal ALE3EI_2092 IPR003439 ABC transporter-like ALE3EI_2092 IPR003593 AAA+ ATPase domain ALE3EI_2092 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2092 IPR015854 ABC transporter, lipoprotein release, LolD ALE3EI_2092 IPR017871 ABC transporter, conserved site ALE3EI_2094 IPR002569 Peptide methionine sulphoxide reductase MsrA ALE3EI_2094 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily ALE3EI_2095 IPR020602 GTP cyclohydrolase I domain ALE3EI_2095 IPR018234 GTP cyclohydrolase I, conserved site ALE3EI_2095 IPR001474 GTP cyclohydrolase I ALE3EI_2097 IPR010917 TonB-dependent receptor, conserved site ALE3EI_2097 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ALE3EI_2097 IPR010916 TonB box, conserved site ALE3EI_2097 IPR039426 Vitamin B12 transporter BtuB-like ALE3EI_2097 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_2097 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_2097 IPR012910 TonB-dependent receptor, plug domain ALE3EI_2102 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALE3EI_2102 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ALE3EI_2102 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2102 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ALE3EI_2103 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_2103 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_2103 IPR022278 Phosphoserine aminotransferase ALE3EI_2103 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ALE3EI_2103 IPR000192 Aminotransferase class V domain ALE3EI_2103 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_2105 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALE3EI_2105 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALE3EI_2111 IPR012676 TGS-like ALE3EI_2111 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2111 IPR006073 GTP binding domain ALE3EI_2111 IPR004095 TGS ALE3EI_2111 IPR031167 OBG-type guanine nucleotide-binding (G) domain ALE3EI_2111 IPR012675 Beta-grasp domain superfamily ALE3EI_2111 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 ALE3EI_2111 IPR013029 YchF, C-terminal domain ALE3EI_2111 IPR041706 YchF, N-terminal ALE3EI_2111 IPR023192 TGS-like domain superfamily ALE3EI_2113 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2113 IPR006171 TOPRIM domain ALE3EI_2113 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2113 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_2113 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALE3EI_2113 IPR002288 DNA gyrase B subunit, C-terminal ALE3EI_2113 IPR018522 DNA topoisomerase, type IIA, conserved site ALE3EI_2113 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal ALE3EI_2113 IPR001241 DNA topoisomerase, type IIA ALE3EI_2113 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ALE3EI_2113 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 ALE3EI_2115 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily ALE3EI_2115 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta ALE3EI_2115 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal ALE3EI_2115 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ALE3EI_2116 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L ALE3EI_2116 IPR019823 Large-conductance mechanosensitive channel, conserved site ALE3EI_2116 IPR001185 Large-conductance mechanosensitive channel ALE3EI_2116 IPR036019 Gated mechanosensitive channel ALE3EI_2117 IPR005467 Histidine kinase domain ALE3EI_2117 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2117 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2117 IPR011006 CheY-like superfamily ALE3EI_2117 IPR035965 PAS domain superfamily ALE3EI_2117 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_2117 IPR015387 LuxQ, periplasmic ALE3EI_2117 IPR029151 Periplasmic sensor-like domain superfamily ALE3EI_2117 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_2117 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2117 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_2121 IPR011991 ArsR-like helix-turn-helix domain ALE3EI_2121 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2121 IPR011008 Dimeric alpha-beta barrel ALE3EI_2121 IPR019888 Transcription regulator AsnC-type ALE3EI_2121 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_2121 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALE3EI_2121 IPR000485 AsnC-type HTH domain ALE3EI_2121 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ALE3EI_2122 IPR002818 DJ-1/PfpI ALE3EI_2122 IPR029062 Class I glutamine amidotransferase-like ALE3EI_2122 IPR006286 Deglycase PfpI ALE3EI_2124 IPR030960 3-dehydroquinate synthase domain ALE3EI_2124 IPR016037 3-dehydroquinate synthase AroB ALE3EI_2124 IPR030963 3-dehydroquinate synthase family ALE3EI_2125 IPR002872 Proline dehydrogenase domain ALE3EI_2125 IPR015659 Proline oxidase family ALE3EI_2125 IPR029041 FAD-linked oxidoreductase-like ALE3EI_2130 IPR014710 RmlC-like jelly roll fold ALE3EI_2130 IPR018062 HTH domain AraC-type, conserved site ALE3EI_2130 IPR020449 Transcription regulator HTH, AraC- type ALE3EI_2130 IPR018060 DNA binding HTH domain, AraC-type ALE3EI_2130 IPR009057 Homeobox-like domain superfamily ALE3EI_2130 IPR011051 RmlC-like cupin domain superfamily ALE3EI_2130 IPR013096 Cupin 2, conserved barrel ALE3EI_2132 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ALE3EI_2132 IPR008141 Alanine dehydrogenase ALE3EI_2132 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 ALE3EI_2132 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 ALE3EI_2132 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2132 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ALE3EI_2135 IPR004605 DNA helicase, Holliday junction RuvB-type ALE3EI_2135 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_2135 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2135 IPR008823 RuvB C-terminal winged helix domain ALE3EI_2135 IPR008824 RuvB-like P-loop domain ALE3EI_2135 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2135 IPR041445 RuvB, AAA lid domain ALE3EI_2135 IPR003593 AAA+ ATPase domain ALE3EI_2136 IPR003593 AAA+ ATPase domain ALE3EI_2136 IPR002197 DNA binding HTH domain, Fis-type ALE3EI_2136 IPR009057 Homeobox-like domain superfamily ALE3EI_2136 IPR011006 CheY-like superfamily ALE3EI_2136 IPR002078 RNA polymerase sigma factor 54 interaction domain ALE3EI_2136 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALE3EI_2136 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALE3EI_2136 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2136 IPR025944 Sigma-54 interaction domain, conserved site ALE3EI_2136 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2137 IPR003607 HD/PDEase domain ALE3EI_2137 IPR006674 HD domain ALE3EI_2138 IPR011004 Trimeric LpxA-like superfamily ALE3EI_2138 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region ALE3EI_2138 IPR001451 Hexapeptide repeat ALE3EI_2138 IPR018357 Hexapeptide transferase, conserved site ALE3EI_2138 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD ALE3EI_2139 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ ALE3EI_2139 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ ALE3EI_2139 IPR029069 HotDog domain superfamily ALE3EI_2139 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_2139 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase ALE3EI_2139 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal ALE3EI_2139 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal ALE3EI_2140 IPR011004 Trimeric LpxA-like superfamily ALE3EI_2140 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal ALE3EI_2140 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily ALE3EI_2140 IPR001451 Hexapeptide repeat ALE3EI_2140 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase ALE3EI_2141 IPR013185 Translation elongation factor, KOW-like ALE3EI_2141 IPR001059 Translation elongation factor P/YeiP, central ALE3EI_2141 IPR015365 Elongation factor P, C-terminal ALE3EI_2141 IPR014722 Ribosomal protein L2, domain 2 ALE3EI_2141 IPR013852 Translation elongation factor P/YeiP, conserved site ALE3EI_2141 IPR011768 Translation elongation factor P ALE3EI_2141 IPR008991 Translation protein SH3-like domain superfamily ALE3EI_2141 IPR020599 Translation elongation factor P/YeiP ALE3EI_2141 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_2142 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region ALE3EI_2142 IPR018357 Hexapeptide transferase, conserved site ALE3EI_2142 IPR001451 Hexapeptide repeat ALE3EI_2142 IPR011004 Trimeric LpxA-like superfamily ALE3EI_2142 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD ALE3EI_2144 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2144 IPR005810 Succinyl-CoA ligase, alpha subunit ALE3EI_2144 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site ALE3EI_2144 IPR003781 CoA-binding ALE3EI_2144 IPR005811 ATP-citrate lyase/succinyl-CoA ligase ALE3EI_2144 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site ALE3EI_2144 IPR016102 Succinyl-CoA synthetase-like ALE3EI_2145 IPR002347 Short-chain dehydrogenase/reductase SDR ALE3EI_2145 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ALE3EI_2145 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2145 IPR020904 Short-chain dehydrogenase/reductase, conserved site ALE3EI_2148 IPR038377 Sodium/glucose symporter superfamily ALE3EI_2148 IPR011851 Sodium/proline symporter ALE3EI_2148 IPR001734 Sodium/solute symporter ALE3EI_2148 IPR018212 Sodium/solute symporter, conserved site ALE3EI_2149 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily ALE3EI_2149 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid ALE3EI_2149 IPR018130 Ribosomal protein S2, conserved site ALE3EI_2149 IPR001865 Ribosomal protein S2 ALE3EI_2151 IPR011322 Nitrogen regulatory PII-like, alpha/beta ALE3EI_2151 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ALE3EI_2151 IPR020621 ATP phosphoribosyltransferase HisG, long form ALE3EI_2151 IPR001348 ATP phosphoribosyltransferase HisG ALE3EI_2151 IPR018198 ATP phosphoribosyltransferase, conserved site ALE3EI_2151 IPR013820 ATP phosphoribosyltransferase, catalytic domain ALE3EI_2151 IPR013115 Histidine biosynthesis HisG, C-terminal ALE3EI_2152 IPR016161 Aldehyde/histidinol dehydrogenase ALE3EI_2152 IPR012131 Histidinol dehydrogenase ALE3EI_2152 IPR001692 Histidinol dehydrogenase, conserved site ALE3EI_2152 IPR022695 Histidinol dehydrogenase, monofunctional ALE3EI_2153 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ALE3EI_2153 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_2153 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_2153 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_2153 IPR005861 Histidinol-phosphate aminotransferase family ALE3EI_2153 IPR004839 Aminotransferase, class I/classII ALE3EI_2154 IPR005954 Histidinol-phosphatase ALE3EI_2154 IPR036412 HAD-like superfamily ALE3EI_2154 IPR013954 Polynucleotide kinase 3 phosphatase ALE3EI_2154 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site ALE3EI_2154 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily ALE3EI_2154 IPR006549 HAD-superfamily hydrolase,subfamily IIIA ALE3EI_2154 IPR006543 Histidinol-phosphate phosphatase ALE3EI_2154 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_2154 IPR023214 HAD superfamily ALE3EI_2154 IPR020566 Histidine biosynthesis bifunctional protein HisB ALE3EI_2154 IPR000807 Imidazoleglycerol-phosphate dehydratase ALE3EI_2155 IPR029062 Class I glutamine amidotransferase-like ALE3EI_2155 IPR017926 Glutamine amidotransferase ALE3EI_2155 IPR010139 Imidazole glycerol phosphate synthase, subunit H ALE3EI_2156 IPR006062 Histidine biosynthesis ALE3EI_2156 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase ALE3EI_2156 IPR013785 Aldolase-type TIM barrel ALE3EI_2156 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA ALE3EI_2156 IPR011060 Ribulose-phosphate binding barrel ALE3EI_2157 IPR004651 Histidine biosynthesis, HisF ALE3EI_2157 IPR006062 Histidine biosynthesis ALE3EI_2157 IPR013785 Aldolase-type TIM barrel ALE3EI_2157 IPR011060 Ribulose-phosphate binding barrel ALE3EI_2158 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily ALE3EI_2158 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain ALE3EI_2158 IPR023019 Histidine biosynthesis bifunctional protein HisIE ALE3EI_2158 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase ALE3EI_2158 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like ALE3EI_2159 IPR004488 Magnesium/cobalt transport protein CorA ALE3EI_2159 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB ALE3EI_2165 IPR015590 Aldehyde dehydrogenase domain ALE3EI_2165 IPR016162 Aldehyde dehydrogenase, N-terminal ALE3EI_2165 IPR016163 Aldehyde dehydrogenase, C-terminal ALE3EI_2165 IPR016161 Aldehyde/histidinol dehydrogenase ALE3EI_2169 IPR010920 LSM domain superfamily ALE3EI_2169 IPR006685 Mechanosensitive ion channel MscS ALE3EI_2169 IPR011066 Mechanosensitive ion channel MscS, C-terminal ALE3EI_2169 IPR030192 Miniconductance mechanosensitive channel YbdG ALE3EI_2170 IPR023845 Domain of unknown function DUF3817, transmembrane ALE3EI_2171 IPR006685 Mechanosensitive ion channel MscS ALE3EI_2171 IPR023298 P-type ATPase, transmembrane domain superfamily ALE3EI_2171 IPR010920 LSM domain superfamily ALE3EI_2171 IPR011066 Mechanosensitive ion channel MscS, C-terminal ALE3EI_2171 IPR006686 Mechanosensitive ion channel MscS, conserved site ALE3EI_2171 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 ALE3EI_2171 IPR023408 Mechanosensitive ion channel MscS domain superfamily ALE3EI_2171 IPR024393 Mechanosensitive ion channel MscS, porin domain ALE3EI_2171 IPR025692 Mechanosensitive ion channel inner membrane domain 1 ALE3EI_2173 IPR002347 Short-chain dehydrogenase/reductase SDR ALE3EI_2173 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2179 IPR036737 OmpA-like domain superfamily ALE3EI_2179 IPR006665 OmpA-like domain ALE3EI_2179 IPR025713 Motility protein B, N-terminal domain ALE3EI_2180 IPR023408 Mechanosensitive ion channel MscS domain superfamily ALE3EI_2180 IPR008910 Conserved TM helix ALE3EI_2180 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 ALE3EI_2180 IPR006686 Mechanosensitive ion channel MscS, conserved site ALE3EI_2180 IPR011066 Mechanosensitive ion channel MscS, C-terminal ALE3EI_2180 IPR010920 LSM domain superfamily ALE3EI_2180 IPR006685 Mechanosensitive ion channel MscS ALE3EI_2181 IPR007627 RNA polymerase sigma-70 region 2 ALE3EI_2181 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2181 IPR028630 RNA polymerase sigma factor RpoD ALE3EI_2181 IPR012760 RNA polymerase sigma factor RpoD, C-terminal ALE3EI_2181 IPR013324 RNA polymerase sigma factor, region 3/4-like ALE3EI_2181 IPR013325 RNA polymerase sigma factor, region 2 ALE3EI_2181 IPR007624 RNA polymerase sigma-70 region 3 ALE3EI_2181 IPR009042 RNA polymerase sigma-70 region 1.2 ALE3EI_2181 IPR014284 RNA polymerase sigma-70 like domain ALE3EI_2181 IPR000943 RNA polymerase sigma-70 ALE3EI_2181 IPR042189 Sigma-70 factor, region 1.1 superfamily ALE3EI_2181 IPR007127 RNA polymerase sigma factor 70, region 1.1 ALE3EI_2181 IPR007630 RNA polymerase sigma-70 region 4 ALE3EI_2183 IPR000834 Peptidase M14, carboxypeptidase A ALE3EI_2183 IPR033810 Carboxypeptidase T ALE3EI_2194 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_2194 IPR019844 Cold-shock (CSD) domain ALE3EI_2194 IPR002059 Cold-shock protein, DNA-binding ALE3EI_2194 IPR011129 Cold shock domain ALE3EI_2194 IPR012156 Cold shock, CspA ALE3EI_2195 IPR035451 Ada-like domain superfamily ALE3EI_2195 IPR004026 Ada DNA repair, metal-binding ALE3EI_2195 IPR009057 Homeobox-like domain superfamily ALE3EI_2195 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA ALE3EI_2195 IPR018062 HTH domain AraC-type, conserved site ALE3EI_2195 IPR018060 DNA binding HTH domain, AraC-type ALE3EI_2201 IPR005118 Transcription-repair-coupling factor, C-terminal domain ALE3EI_2201 IPR037235 TRCF-like, C-terminal domain ALE3EI_2201 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2201 IPR004576 Transcription-repair coupling factor ALE3EI_2201 IPR001650 Helicase, C-terminal ALE3EI_2201 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_2201 IPR041471 UvrB, interaction domain ALE3EI_2201 IPR003711 CarD-like/TRCF domain ALE3EI_2201 IPR036101 CarD-like/TRCF domain superfamily ALE3EI_2201 IPR011545 DEAD/DEAH box helicase domain ALE3EI_2208 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ALE3EI_2208 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ALE3EI_2208 IPR023480 Uncharacterised protein family UPF0312/YceI ALE3EI_2210 IPR011006 CheY-like superfamily ALE3EI_2210 IPR001867 OmpR/PhoB-type DNA-binding domain ALE3EI_2210 IPR039420 Transcriptional regulatory protein WalR-like ALE3EI_2210 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2210 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_2210 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2212 IPR008753 Peptidase M13, N-terminal domain ALE3EI_2212 IPR042089 Peptidase M13, domain 2 ALE3EI_2212 IPR018497 Peptidase M13, C-terminal domain ALE3EI_2212 IPR000718 Peptidase M13 ALE3EI_2212 IPR024079 Metallopeptidase, catalytic domain superfamily ALE3EI_2213 IPR011659 WD40-like Beta Propeller ALE3EI_2213 IPR014167 Tol-Pal system protein TolB ALE3EI_2213 IPR011042 Six-bladed beta-propeller, TolB-like ALE3EI_2213 IPR036752 TolB, N-terminal domain superfamily ALE3EI_2213 IPR007195 TolB, N-terminal ALE3EI_2216 IPR012156 Cold shock, CspA ALE3EI_2216 IPR011129 Cold shock domain ALE3EI_2216 IPR019844 Cold-shock (CSD) domain ALE3EI_2216 IPR002059 Cold-shock protein, DNA-binding ALE3EI_2216 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_2218 IPR018297 Adenylyl cyclase class-4/guanylyl cyclase, conserved site ALE3EI_2218 IPR029787 Nucleotide cyclase ALE3EI_2218 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase ALE3EI_2220 IPR010286 METTL16/RlmF family ALE3EI_2220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_2220 IPR016909 Ribosomal RNA large subunit methyltransferase F ALE3EI_2222 IPR020846 Major facilitator superfamily domain ALE3EI_2222 IPR011701 Major facilitator superfamily ALE3EI_2222 IPR004812 Drug resistance transporter Bcr/CmlA subfamily ALE3EI_2222 IPR036259 MFS transporter superfamily ALE3EI_2222 IPR004734 Multidrug resistance protein ALE3EI_2223 IPR022369 Integral membrane protein TerC, riboswitch-linked ALE3EI_2223 IPR005496 Integral membrane protein TerC ALE3EI_2227 IPR036974 PUA domain superfamily ALE3EI_2227 IPR015947 PUA-like superfamily ALE3EI_2227 IPR041532 RlmI, PUA-like domain ALE3EI_2227 IPR019614 S-adenosylmethionine-dependent methyltransferase ALE3EI_2227 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_2228 IPR005496 Integral membrane protein TerC ALE3EI_2229 IPR006162 Phosphopantetheine attachment site ALE3EI_2229 IPR009081 Phosphopantetheine binding ACP domain ALE3EI_2229 IPR003231 Acyl carrier protein (ACP) ALE3EI_2229 IPR036736 ACP-like superfamily ALE3EI_2231 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ ALE3EI_2231 IPR029069 HotDog domain superfamily ALE3EI_2231 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ ALE3EI_2232 IPR002347 Short-chain dehydrogenase/reductase SDR ALE3EI_2232 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2233 IPR001099 Chalcone/stilbene synthase, N-terminal ALE3EI_2233 IPR012328 Chalcone/stilbene synthase, C-terminal ALE3EI_2233 IPR011141 Polyketide synthase, type III ALE3EI_2233 IPR016039 Thiolase-like ALE3EI_2235 IPR002938 FAD-binding domain ALE3EI_2235 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_2236 IPR006690 Outer membrane protein, OmpA-like, conserved site ALE3EI_2236 IPR008722 Outer membrane porin F, N-terminal ALE3EI_2236 IPR006664 Outer membrane protein, bacterial ALE3EI_2236 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel ALE3EI_2236 IPR028974 TSP type-3 repeat ALE3EI_2236 IPR006665 OmpA-like domain ALE3EI_2236 IPR036737 OmpA-like domain superfamily ALE3EI_2239 IPR005475 Transketolase-like, pyrimidine-binding domain ALE3EI_2239 IPR033248 Transketolase, C-terminal domain ALE3EI_2239 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ALE3EI_2239 IPR029061 Thiamin diphosphate-binding fold ALE3EI_2242 IPR000845 Nucleoside phosphorylase domain ALE3EI_2242 IPR035994 Nucleoside phosphorylase superfamily ALE3EI_2242 IPR004402 Purine nucleoside phosphorylase DeoD-type ALE3EI_2242 IPR018016 Nucleoside phosphorylase, conserved site ALE3EI_2245 IPR002043 Uracil-DNA glycosylase family 1 ALE3EI_2245 IPR018085 Uracil-DNA glycosylase, active site ALE3EI_2245 IPR005122 Uracil-DNA glycosylase-like ALE3EI_2245 IPR036895 Uracil-DNA glycosylase-like domain superfamily ALE3EI_2246 IPR002625 Smr domain ALE3EI_2246 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2246 IPR005747 Endonuclease MutS2 ALE3EI_2246 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ALE3EI_2246 IPR007696 DNA mismatch repair protein MutS, core ALE3EI_2246 IPR000432 DNA mismatch repair protein MutS, C-terminal ALE3EI_2246 IPR036063 Smr domain superfamily ALE3EI_2247 IPR007263 Protein of unknown function DUF393 ALE3EI_2250 IPR004215 Prokaryotic glutathione synthetase, N-terminal ALE3EI_2250 IPR016185 Pre-ATP-grasp domain superfamily ALE3EI_2250 IPR006284 Glutathione synthetase, prokaryotic ALE3EI_2250 IPR013815 ATP-grasp fold, subdomain 1 ALE3EI_2250 IPR011761 ATP-grasp fold ALE3EI_2250 IPR004218 Prokaryotic glutathione synthetase, ATP-binding ALE3EI_2252 IPR036458 Sodium:dicarboxylate symporter superfamily ALE3EI_2252 IPR033380 Glutamate-aspartate symport protein GltP/GltT ALE3EI_2252 IPR001991 Sodium:dicarboxylate symporter ALE3EI_2252 IPR018107 Sodium:dicarboxylate symporter, conserved site ALE3EI_2253 IPR000453 Chorismate synthase ALE3EI_2253 IPR020541 Chorismate synthase, conserved site ALE3EI_2253 IPR035904 Chorismate synthase AroC superfamily ALE3EI_2255 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALE3EI_2255 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALE3EI_2255 IPR016166 FAD-binding domain, PCMH-type ALE3EI_2255 IPR036318 FAD-binding, type PCMH-like superfamily ALE3EI_2255 IPR016164 FAD-linked oxidase-like, C-terminal ALE3EI_2255 IPR006094 FAD linked oxidase, N-terminal ALE3EI_2255 IPR009051 Alpha-helical ferredoxin ALE3EI_2255 IPR004113 FAD-linked oxidase, C-terminal ALE3EI_2259 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA ALE3EI_2259 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALE3EI_2259 IPR001296 Glycosyl transferase, family 1 ALE3EI_2260 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily ALE3EI_2260 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily ALE3EI_2260 IPR002772 Glycoside hydrolase family 3 C-terminal domain ALE3EI_2260 IPR019800 Glycoside hydrolase, family 3, active site ALE3EI_2260 IPR001764 Glycoside hydrolase, family 3, N-terminal ALE3EI_2260 IPR017853 Glycoside hydrolase superfamily ALE3EI_2262 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALE3EI_2262 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALE3EI_2262 IPR004017 Cysteine-rich domain ALE3EI_2262 IPR009051 Alpha-helical ferredoxin ALE3EI_2262 IPR023234 NarG-like domain ALE3EI_2262 IPR036197 NarG-like superfamily ALE3EI_2264 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ALE3EI_2264 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ALE3EI_2264 IPR009051 Alpha-helical ferredoxin ALE3EI_2264 IPR036197 NarG-like superfamily ALE3EI_2264 IPR004017 Cysteine-rich domain ALE3EI_2266 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain ALE3EI_2268 IPR019897 RidA, conserved site ALE3EI_2268 IPR006056 RidA family ALE3EI_2268 IPR006175 YjgF/YER057c/UK114 family ALE3EI_2268 IPR035959 RutC-like superfamily ALE3EI_2270 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD ALE3EI_2270 IPR017860 Peptidase M22, conserved site ALE3EI_2270 IPR000905 Gcp-like domain ALE3EI_2270 IPR017861 Kae1/TsaD family ALE3EI_2274 IPR029028 Alpha/beta knot methyltransferases ALE3EI_2274 IPR013123 RNA 2-O ribose methyltransferase, substrate binding ALE3EI_2274 IPR001537 tRNA/rRNA methyltransferase, SpoU type ALE3EI_2274 IPR029064 50S ribosomal protein L30e-like ALE3EI_2274 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ALE3EI_2279 IPR000612 Proteolipid membrane potential modulator ALE3EI_2285 IPR012347 Ferritin-like ALE3EI_2285 IPR009078 Ferritin-like superfamily ALE3EI_2285 IPR010287 Domain of unknown function DUF892 ALE3EI_2286 IPR018060 DNA binding HTH domain, AraC-type ALE3EI_2286 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_2286 IPR013783 Immunoglobulin-like fold ALE3EI_2286 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ALE3EI_2286 IPR011123 Two component regulator three Y ALE3EI_2286 IPR015943 WD40/YVTN repeat-like-containing domain superfamily ALE3EI_2286 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2286 IPR018062 HTH domain AraC-type, conserved site ALE3EI_2286 IPR011110 Two component regulator propeller ALE3EI_2286 IPR009057 Homeobox-like domain superfamily ALE3EI_2286 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_2286 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_2286 IPR005467 Histidine kinase domain ALE3EI_2286 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2286 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2286 IPR011006 CheY-like superfamily ALE3EI_2289 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase ALE3EI_2289 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_2289 IPR006076 FAD dependent oxidoreductase ALE3EI_2289 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily ALE3EI_2289 IPR031656 Alpha-glycerophosphate oxidase, C-terminal ALE3EI_2290 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain ALE3EI_2290 IPR006675 HDIG domain ALE3EI_2290 IPR006674 HD domain ALE3EI_2290 IPR003607 HD/PDEase domain ALE3EI_2290 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain ALE3EI_2291 IPR020613 Thiolase, conserved site ALE3EI_2291 IPR002155 Thiolase ALE3EI_2291 IPR016039 Thiolase-like ALE3EI_2291 IPR020615 Thiolase, acyl-enzyme intermediate active site ALE3EI_2291 IPR020616 Thiolase, N-terminal ALE3EI_2291 IPR020610 Thiolase, active site ALE3EI_2291 IPR020617 Thiolase, C-terminal ALE3EI_2292 IPR000064 Endopeptidase, NLPC/P60 domain ALE3EI_2292 IPR038765 Papain-like cysteine peptidase superfamily ALE3EI_2293 IPR011990 Tetratricopeptide-like helical domain superfamily ALE3EI_2293 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ALE3EI_2293 IPR000780 MCP methyltransferase, CheR-type ALE3EI_2293 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_2293 IPR013026 Tetratricopeptide repeat-containing domain ALE3EI_2293 IPR019734 Tetratricopeptide repeat ALE3EI_2294 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ALE3EI_2294 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ALE3EI_2294 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal ALE3EI_2294 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta ALE3EI_2294 IPR005743 DNA gyrase, subunit A ALE3EI_2294 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily ALE3EI_2294 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat ALE3EI_2295 IPR003593 AAA+ ATPase domain ALE3EI_2295 IPR003959 ATPase, AAA-type, core ALE3EI_2295 IPR019489 Clp ATPase, C-terminal ALE3EI_2295 IPR036628 Clp, N-terminal domain superfamily ALE3EI_2295 IPR004176 Clp, N-terminal ALE3EI_2295 IPR001270 ClpA/B family ALE3EI_2295 IPR028299 ClpA/B, conserved site 2 ALE3EI_2295 IPR041546 ClpA/ClpB, AAA lid domain ALE3EI_2295 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2295 IPR001943 UVR domain ALE3EI_2295 IPR018368 ClpA/B, conserved site 1 ALE3EI_2299 IPR001106 Aromatic amino acid lyase ALE3EI_2299 IPR024083 Fumarase/histidase, N-terminal ALE3EI_2299 IPR005921 Histidine ammonia-lyase ALE3EI_2299 IPR008948 L-Aspartase-like ALE3EI_2299 IPR022313 Phenylalanine/histidine ammonia-lyases, active site ALE3EI_2300 IPR013740 Redoxin ALE3EI_2300 IPR013766 Thioredoxin domain ALE3EI_2300 IPR017937 Thioredoxin, conserved site ALE3EI_2300 IPR036249 Thioredoxin-like superfamily ALE3EI_2301 IPR017953 Carbohydrate kinase, predicted, conserved site ALE3EI_2301 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase ALE3EI_2301 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr ALE3EI_2301 IPR029056 Ribokinase-like ALE3EI_2301 IPR004443 YjeF N-terminal domain ALE3EI_2301 IPR036652 YjeF N-terminal domain superfamily ALE3EI_2302 IPR006223 Glycine cleavage system T protein ALE3EI_2302 IPR022903 Glycine cleavage system T protein, bacteria ALE3EI_2302 IPR028896 Aminomethyltransferase-like ALE3EI_2302 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain ALE3EI_2302 IPR006222 Aminomethyltransferase, folate-binding domain ALE3EI_2302 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal ALE3EI_2302 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 ALE3EI_2304 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily ALE3EI_2304 IPR001533 Pterin 4 alpha carbinolamine dehydratase ALE3EI_2305 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_2305 IPR020992 Tail specific protease, C-terminal ALE3EI_2305 IPR001478 PDZ domain ALE3EI_2305 IPR036034 PDZ superfamily ALE3EI_2305 IPR005151 Tail specific protease ALE3EI_2305 IPR040573 Tail specific protease, N-terminal domain ALE3EI_2305 IPR004447 C-terminal-processing peptidase S41A ALE3EI_2306 IPR002876 Transcriptional regulator TACO1-like ALE3EI_2306 IPR029072 YebC-like ALE3EI_2306 IPR026564 Transcriptional regulator TACO1-like, domain 3 ALE3EI_2306 IPR017856 Integrase-like, N-terminal ALE3EI_2309 IPR039697 Iron-type alcohol dehydrogenase-like ALE3EI_2309 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA ALE3EI_2311 IPR027785 UvrD-like helicase C-terminal domain ALE3EI_2311 IPR041451 RecD-like DNA helicase, SH3 domain ALE3EI_2311 IPR006345 RecD-like DNA helicase ALE3EI_2311 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2311 IPR029493 RecD helicase-like helix-hairpin-helix domain ALE3EI_2311 IPR003593 AAA+ ATPase domain ALE3EI_2317 IPR012763 DNA polymerase III, subunit gamma/ tau ALE3EI_2317 IPR001270 ClpA/B family ALE3EI_2317 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal ALE3EI_2317 IPR022754 DNA polymerase III, gamma subunit, domain III ALE3EI_2317 IPR003593 AAA+ ATPase domain ALE3EI_2317 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2320 IPR003695 Ppx/GppA phosphatase ALE3EI_2321 IPR024953 Polyphosphate kinase middle domain ALE3EI_2321 IPR041108 Polyphosphate kinase, C-terminal domain 1 ALE3EI_2321 IPR025198 Polyphosphate kinase N-terminal domain ALE3EI_2321 IPR001736 Phospholipase D/Transphosphatidylase ALE3EI_2321 IPR025200 Polyphosphate kinase C-terminal domain 2 ALE3EI_2321 IPR036830 Polyphosphate kinase middle domain superfamily ALE3EI_2321 IPR036832 Polyphosphate kinase N-terminal domain superfamily ALE3EI_2321 IPR003414 Polyphosphate kinase ALE3EI_2323 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal ALE3EI_2323 IPR000659 Pyridoxamine 5'-phosphate oxidase ALE3EI_2323 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative ALE3EI_2323 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site ALE3EI_2323 IPR012349 FMN-binding split barrel ALE3EI_2325 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ALE3EI_2325 IPR001279 Metallo-beta-lactamase ALE3EI_2325 IPR013471 Ribonuclease Z/BN ALE3EI_2327 IPR006130 Aspartate/ornithine carbamoyltransferase ALE3EI_2327 IPR002082 Aspartate carbamoyltransferase ALE3EI_2327 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily ALE3EI_2327 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain ALE3EI_2327 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding ALE3EI_2328 IPR000836 Phosphoribosyltransferase domain ALE3EI_2328 IPR029057 Phosphoribosyltransferase-like ALE3EI_2328 IPR023050 Bifunctional protein PyrR ALE3EI_2329 IPR003029 S1 domain ALE3EI_2329 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_2329 IPR000110 Ribosomal protein S1 ALE3EI_2329 IPR022967 RNA-binding domain, S1 ALE3EI_2331 IPR010617 Endosomal/lysomomal potassium channel TMEM175 ALE3EI_2333 IPR011994 Cytidylate kinase domain ALE3EI_2333 IPR003136 Cytidylate kinase ALE3EI_2333 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2335 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALE3EI_2335 IPR008268 Peptidase S16, active site ALE3EI_2335 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2335 IPR003111 Lon, substrate-binding domain ALE3EI_2335 IPR027065 Lon protease ALE3EI_2335 IPR008269 Peptidase S16, Lon proteolytic domain ALE3EI_2335 IPR003959 ATPase, AAA-type, core ALE3EI_2335 IPR004815 Lon protease, bacterial/eukaryotic-type ALE3EI_2335 IPR027543 Lon protease, bacterial ALE3EI_2335 IPR003593 AAA+ ATPase domain ALE3EI_2335 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_2335 IPR015947 PUA-like superfamily ALE3EI_2336 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2336 IPR013324 RNA polymerase sigma factor, region 3/4-like ALE3EI_2336 IPR014284 RNA polymerase sigma-70 like domain ALE3EI_2336 IPR013325 RNA polymerase sigma factor, region 2 ALE3EI_2336 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ALE3EI_2336 IPR007627 RNA polymerase sigma-70 region 2 ALE3EI_2336 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ALE3EI_2336 IPR014293 RNA polymerase sigma-70, actinobacteria ALE3EI_2336 IPR039425 RNA polymerase sigma-70 like ALE3EI_2341 IPR020846 Major facilitator superfamily domain ALE3EI_2341 IPR036259 MFS transporter superfamily ALE3EI_2341 IPR024671 Autophagy-related protein 22-like ALE3EI_2345 IPR011057 Mss4-like superfamily ALE3EI_2345 IPR002579 Peptide methionine sulphoxide reductase MrsB ALE3EI_2345 IPR028427 Peptide methionine sulfoxide reductase ALE3EI_2346 IPR002579 Peptide methionine sulphoxide reductase MrsB ALE3EI_2346 IPR028427 Peptide methionine sulfoxide reductase ALE3EI_2346 IPR011057 Mss4-like superfamily ALE3EI_2347 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_2347 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily ALE3EI_2347 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I ALE3EI_2347 IPR006258 Dihydrolipoamide dehydrogenase ALE3EI_2347 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALE3EI_2347 IPR023753 FAD/NAD(P)-binding domain ALE3EI_2347 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site ALE3EI_2348 IPR036441 Dehydroquinase, class II superfamily ALE3EI_2348 IPR018509 Dehydroquinase, class II, conserved site ALE3EI_2348 IPR001874 Dehydroquinase, class II ALE3EI_2353 IPR023009 Tyrosine recombinase XerC/XerD ALE3EI_2353 IPR010998 Integrase/recombinase, N-terminal ALE3EI_2353 IPR011010 DNA breaking-rejoining enzyme, catalytic core ALE3EI_2353 IPR013762 Integrase-like, catalytic domain superfamily ALE3EI_2353 IPR002104 Integrase, catalytic domain ALE3EI_2353 IPR004107 Integrase, SAM-like, N-terminal ALE3EI_2353 IPR011932 Tyrosine recombinase XerD ALE3EI_2354 IPR023210 NADP-dependent oxidoreductase domain ALE3EI_2354 IPR020471 Aldo/keto reductase ALE3EI_2354 IPR036812 NADP-dependent oxidoreductase domain superfamily ALE3EI_2354 IPR018170 Aldo/keto reductase, conserved site ALE3EI_2355 IPR004087 K Homology domain ALE3EI_2355 IPR006674 HD domain ALE3EI_2355 IPR004088 K Homology domain, type 1 ALE3EI_2355 IPR036612 K Homology domain, type 1 superfamily ALE3EI_2355 IPR022711 Ribonuclease Y, N-terminal ALE3EI_2355 IPR017705 Ribonuclease Y ALE3EI_2355 IPR003607 HD/PDEase domain ALE3EI_2355 IPR006675 HDIG domain ALE3EI_2358 IPR016047 Peptidase M23 ALE3EI_2358 IPR003646 SH3-like domain, bacterial-type ALE3EI_2358 IPR011055 Duplicated hybrid motif ALE3EI_2360 IPR000192 Aminotransferase class V domain ALE3EI_2360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_2360 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ALE3EI_2360 IPR016454 Cysteine desulfurase ALE3EI_2360 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_2360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_2366 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_2366 IPR034757 Ornithine aminotransferase, bacterial type ALE3EI_2366 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_2366 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_2366 IPR010164 Ornithine aminotransferase ALE3EI_2366 IPR005814 Aminotransferase class-III ALE3EI_2367 IPR010280 (Uracil-5)-methyltransferase family ALE3EI_2367 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_2367 IPR002792 TRAM domain ALE3EI_2367 IPR030391 RNA methyltransferase TrmA, conserved site ALE3EI_2367 IPR030390 RNA methyltransferase TrmA, active site ALE3EI_2367 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_2370 IPR019614 S-adenosylmethionine-dependent methyltransferase ALE3EI_2370 IPR017244 Ribosomal RNA large subunit methyltransferase K/L ALE3EI_2370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_2370 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ALE3EI_2370 IPR000241 Putative RNA methylase domain ALE3EI_2370 IPR004114 THUMP domain ALE3EI_2373 IPR004254 AdipoR/Haemolysin-III-related ALE3EI_2373 IPR005744 Hly-III ALE3EI_2378 IPR023367 Peptidase M42, domain 2 ALE3EI_2378 IPR008007 Peptidase M42 ALE3EI_2381 IPR004299 Membrane bound O-acyl transferase, MBOAT ALE3EI_2381 IPR028362 Alginate O-acetyltransferase AlgI ALE3EI_2381 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB ALE3EI_2383 IPR001463 Sodium:alanine symporter ALE3EI_2385 IPR028923 SAICAR synthetase/ADE2, N-terminal ALE3EI_2385 IPR018236 SAICAR synthetase, conserved site ALE3EI_2386 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2386 IPR003714 PhoH-like protein ALE3EI_2391 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal ALE3EI_2391 IPR022637 DNA polymerase III, beta sliding clamp, central ALE3EI_2391 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal ALE3EI_2391 IPR001001 DNA polymerase III, beta sliding clamp ALE3EI_2392 IPR029058 Alpha/Beta hydrolase fold ALE3EI_2392 IPR000073 Alpha/beta hydrolase fold-1 ALE3EI_2393 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_2393 IPR005467 Histidine kinase domain ALE3EI_2393 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2393 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_2393 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2393 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2393 IPR035965 PAS domain superfamily ALE3EI_2393 IPR015387 LuxQ, periplasmic ALE3EI_2393 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_2393 IPR029151 Periplasmic sensor-like domain superfamily ALE3EI_2393 IPR011006 CheY-like superfamily ALE3EI_2394 IPR000719 Protein kinase domain ALE3EI_2394 IPR011009 Protein kinase-like domain superfamily ALE3EI_2394 IPR004147 UbiB domain ALE3EI_2394 IPR010232 Probable protein kinase UbiB ALE3EI_2397 IPR027368 tRNA modification GTPase MnmE domain 2 ALE3EI_2397 IPR004520 tRNA modification GTPase MnmE ALE3EI_2397 IPR006073 GTP binding domain ALE3EI_2397 IPR031168 TrmE-type guanine nucleotide-binding domain ALE3EI_2397 IPR003593 AAA+ ATPase domain ALE3EI_2397 IPR018948 GTP-binding protein TrmE, N-terminal ALE3EI_2397 IPR025867 MnmE, helical domain ALE3EI_2397 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2397 IPR005225 Small GTP-binding protein domain ALE3EI_2397 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 ALE3EI_2401 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_2401 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2401 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ALE3EI_2402 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_2402 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_2402 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_2402 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ALE3EI_2404 IPR003362 Bacterial sugar transferase ALE3EI_2405 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALE3EI_2405 IPR001296 Glycosyl transferase, family 1 ALE3EI_2406 IPR001296 Glycosyl transferase, family 1 ALE3EI_2406 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ALE3EI_2406 IPR017814 Mycothiol biosynthesis protein, MshA ALE3EI_2409 IPR001509 NAD-dependent epimerase/dehydratase ALE3EI_2409 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2411 IPR029055 Nucleophile aminohydrolases, N-terminal ALE3EI_2411 IPR006426 Asparagine synthase, glutamine-hydrolyzing ALE3EI_2411 IPR001962 Asparagine synthase ALE3EI_2411 IPR033738 Asparagine synthase, N-terminal domain ALE3EI_2411 IPR017932 Glutamine amidotransferase type 2 domain ALE3EI_2412 IPR001451 Hexapeptide repeat ALE3EI_2412 IPR018357 Hexapeptide transferase, conserved site ALE3EI_2412 IPR039369 Galactoside O-acetyltransferase LacA-like ALE3EI_2412 IPR024688 Maltose/galactoside acetyltransferase ALE3EI_2412 IPR011004 Trimeric LpxA-like superfamily ALE3EI_2413 IPR002797 Polysaccharide biosynthesis protein ALE3EI_2413 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain ALE3EI_2415 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_2415 IPR001173 Glycosyltransferase 2-like ALE3EI_2418 IPR002797 Polysaccharide biosynthesis protein ALE3EI_2419 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain ALE3EI_2419 IPR002891 Adenylyl-sulfate kinase ALE3EI_2419 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ALE3EI_2419 IPR009000 Translation protein, beta-barrel domain superfamily ALE3EI_2419 IPR000795 Transcription factor, GTP-binding domain ALE3EI_2419 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2419 IPR011779 Sulphate adenylyltransferase, large subunit ALE3EI_2419 IPR031157 Tr-type G domain, conserved site ALE3EI_2420 IPR002500 Phosphoadenosine phosphosulphate reductase ALE3EI_2420 IPR011784 Sulphate adenylyltransferase, small subunit ALE3EI_2420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_2421 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2421 IPR002891 Adenylyl-sulfate kinase ALE3EI_2423 IPR020583 Inositol monophosphatase, metal-binding site ALE3EI_2423 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ ALE3EI_2423 IPR020550 Inositol monophosphatase, conserved site ALE3EI_2423 IPR000760 Inositol monophosphatase-like ALE3EI_2425 IPR008331 Ferritin/DPS protein domain ALE3EI_2425 IPR009078 Ferritin-like superfamily ALE3EI_2425 IPR012347 Ferritin-like ALE3EI_2425 IPR023188 DNA-binding protein Dps, conserved site ALE3EI_2425 IPR002177 DNA-binding protein Dps ALE3EI_2432 IPR036249 Thioredoxin-like superfamily ALE3EI_2432 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant ALE3EI_2432 IPR013766 Thioredoxin domain ALE3EI_2434 IPR035952 Rhomboid-like superfamily ALE3EI_2434 IPR022764 Peptidase S54, rhomboid domain ALE3EI_2436 IPR005843 Alpha-D-phosphohexomutase, C-terminal ALE3EI_2436 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily ALE3EI_2436 IPR016066 Alpha-D-phosphohexomutase, conserved site ALE3EI_2436 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III ALE3EI_2436 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III ALE3EI_2436 IPR005841 Alpha-D-phosphohexomutase superfamily ALE3EI_2436 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II ALE3EI_2436 IPR006352 Phosphoglucosamine mutase, bacterial type ALE3EI_2436 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I ALE3EI_2438 IPR000101 Gamma-glutamyltranspeptidase ALE3EI_2438 IPR029055 Nucleophile aminohydrolases, N-terminal ALE3EI_2440 IPR003593 AAA+ ATPase domain ALE3EI_2440 IPR003439 ABC transporter-like ALE3EI_2440 IPR017871 ABC transporter, conserved site ALE3EI_2440 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2440 IPR041102 UvrA, interaction domain ALE3EI_2440 IPR041552 UvrA DNA-binding domain ALE3EI_2440 IPR004602 UvrABC system subunit A ALE3EI_2441 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ALE3EI_2441 IPR031100 LOG family ALE3EI_2444 IPR029061 Thiamin diphosphate-binding fold ALE3EI_2444 IPR033248 Transketolase, C-terminal domain ALE3EI_2444 IPR005475 Transketolase-like, pyrimidine-binding domain ALE3EI_2444 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ALE3EI_2446 IPR006426 Asparagine synthase, glutamine-hydrolyzing ALE3EI_2446 IPR033738 Asparagine synthase, N-terminal domain ALE3EI_2446 IPR017932 Glutamine amidotransferase type 2 domain ALE3EI_2446 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_2446 IPR029055 Nucleophile aminohydrolases, N-terminal ALE3EI_2446 IPR001962 Asparagine synthase ALE3EI_2448 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_2448 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_2448 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2448 IPR011006 CheY-like superfamily ALE3EI_2449 IPR014748 Enoyl-CoA hydratase, C-terminal ALE3EI_2449 IPR001753 Enoyl-CoA hydratase/isomerase ALE3EI_2449 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB ALE3EI_2449 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_2453 IPR039566 Conserved virulence factor B, S1 domain ALE3EI_2453 IPR014464 Conserved virulence factor B ALE3EI_2453 IPR040764 Conserved virulence factor B-like, winged helix domain ALE3EI_2453 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2455 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase ALE3EI_2455 IPR032264 Menaquinone biosynthesis protein MenD, middle domain ALE3EI_2455 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ALE3EI_2455 IPR029061 Thiamin diphosphate-binding fold ALE3EI_2455 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ALE3EI_2456 IPR015890 Chorismate-utilising enzyme, C-terminal ALE3EI_2456 IPR004561 Isochorismate synthase ALE3EI_2456 IPR005801 ADC synthase ALE3EI_2457 IPR006683 Thioesterase domain ALE3EI_2457 IPR003736 Phenylacetic acid degradation-related domain ALE3EI_2457 IPR029069 HotDog domain superfamily ALE3EI_2460 IPR004710 Bile acid:sodium symporter ALE3EI_2460 IPR038770 Sodium/solute symporter superfamily ALE3EI_2460 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 ALE3EI_2470 IPR012338 Beta-lactamase/transpeptidase-like ALE3EI_2470 IPR001466 Beta-lactamase-related ALE3EI_2471 IPR013126 Heat shock protein 70 family ALE3EI_2471 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily ALE3EI_2471 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily ALE3EI_2471 IPR018181 Heat shock protein 70, conserved site ALE3EI_2471 IPR012725 Chaperone DnaK ALE3EI_2472 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain ALE3EI_2472 IPR029460 DNA polymerase, helix-hairpin-helix motif ALE3EI_2472 IPR023073 DNA polymerase, error-prone ALE3EI_2472 IPR003141 Polymerase/histidinol phosphatase, N-terminal ALE3EI_2472 IPR016195 Polymerase/histidinol phosphatase-like ALE3EI_2472 IPR004013 PHP domain ALE3EI_2472 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain ALE3EI_2472 IPR040982 DNA polymerase III alpha subunit finger domain ALE3EI_2472 IPR004805 DNA polymerase III, alpha subunit ALE3EI_2473 IPR022880 DNA polymerase IV ALE3EI_2473 IPR001126 UmuC domain ALE3EI_2473 IPR024728 DNA polymerase type-Y, HhH motif ALE3EI_2473 IPR017961 DNA polymerase, Y-family, little finger domain ALE3EI_2473 IPR036775 DNA polymerase, Y-family, little finger domain superfamily ALE3EI_2474 IPR036590 SOS response associated peptidase-like ALE3EI_2474 IPR003738 SOS response associated peptidase (SRAP) ALE3EI_2475 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form ALE3EI_2475 IPR005130 Serine dehydratase-like, alpha subunit ALE3EI_2475 IPR005131 Serine dehydratase beta chain ALE3EI_2475 IPR029009 Allosteric substrate binding domain superfamily ALE3EI_2477 IPR003700 Ketopantoate hydroxymethyltransferase ALE3EI_2477 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ALE3EI_2477 IPR040442 Pyruvate kinase-like domain superfamily ALE3EI_2478 IPR020103 Pseudouridine synthase, catalytic domain superfamily ALE3EI_2478 IPR002942 RNA-binding S4 domain ALE3EI_2478 IPR036986 RNA-binding S4 domain superfamily ALE3EI_2478 IPR006145 Pseudouridine synthase, RsuA/RluA ALE3EI_2478 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site ALE3EI_2478 IPR006225 Pseudouridine synthase, RluC/RluD ALE3EI_2479 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_2479 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_2479 IPR011006 CheY-like superfamily ALE3EI_2479 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2480 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ALE3EI_2480 IPR005467 Histidine kinase domain ALE3EI_2480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2480 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2485 IPR010016 KipI family ALE3EI_2485 IPR029000 Cyclophilin-like domain superfamily ALE3EI_2485 IPR003833 Carboxyltransferase domain, subdomain C and D ALE3EI_2486 IPR005501 LamB/YcsF/PxpA-like ALE3EI_2486 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ALE3EI_2487 IPR001046 NRAMP family ALE3EI_2488 IPR007863 Peptidase M16, C-terminal ALE3EI_2488 IPR001431 Peptidase M16, zinc-binding site ALE3EI_2488 IPR011765 Peptidase M16, N-terminal ALE3EI_2488 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like ALE3EI_2489 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ALE3EI_2489 IPR020568 Ribosomal protein S5 domain 2-type fold ALE3EI_2489 IPR003593 AAA+ ATPase domain ALE3EI_2489 IPR001208 MCM domain ALE3EI_2489 IPR004482 Mg chelatase-related protein ALE3EI_2489 IPR025158 Mg chelatase-related protein, C-terminal domain ALE3EI_2489 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2489 IPR000523 Magnesium chelatase ChlI domain ALE3EI_2490 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2490 IPR011006 CheY-like superfamily ALE3EI_2490 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_2490 IPR000792 Transcription regulator LuxR, C-terminal ALE3EI_2491 IPR017202 Sensor histidine kinase LiaS/VraS ALE3EI_2491 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ALE3EI_2491 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2491 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2494 IPR023096 Phosphoglucose isomerase, C-terminal ALE3EI_2494 IPR035476 Phosphoglucose isomerase, SIS domain 1 ALE3EI_2494 IPR001672 Phosphoglucose isomerase (PGI) ALE3EI_2494 IPR018189 Phosphoglucose isomerase, conserved site ALE3EI_2494 IPR035482 Phosphoglucose isomerase, SIS domain 2 ALE3EI_2496 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain ALE3EI_2496 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2496 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I ALE3EI_2496 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain ALE3EI_2496 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family ALE3EI_2496 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site ALE3EI_2497 IPR035966 Phosphofructokinase superfamily ALE3EI_2497 IPR022953 ATP-dependent 6-phosphofructokinase ALE3EI_2497 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type ALE3EI_2497 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic ALE3EI_2497 IPR015912 Phosphofructokinase, conserved site ALE3EI_2497 IPR000023 Phosphofructokinase domain ALE3EI_2499 IPR003834 Cytochrome C biogenesis protein, transmembrane domain ALE3EI_2499 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily ALE3EI_2499 IPR022910 Thiol:disulphide interchange protein DsbD ALE3EI_2499 IPR013766 Thioredoxin domain ALE3EI_2499 IPR017937 Thioredoxin, conserved site ALE3EI_2499 IPR036249 Thioredoxin-like superfamily ALE3EI_2499 IPR035671 DsbD gamma ALE3EI_2499 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ALE3EI_2500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_2500 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal ALE3EI_2500 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal ALE3EI_2500 IPR012094 tRNA(Ile)-lysidine synthase ALE3EI_2500 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal ALE3EI_2501 IPR005801 ADC synthase ALE3EI_2501 IPR019999 Anthranilate synthase component I-like ALE3EI_2501 IPR006805 Anthranilate synthase component I, N-terminal ALE3EI_2501 IPR015890 Chorismate-utilising enzyme, C-terminal ALE3EI_2502 IPR029039 Flavoprotein-like superfamily ALE3EI_2502 IPR005025 NADPH-dependent FMN reductase-like ALE3EI_2504 IPR006258 Dihydrolipoamide dehydrogenase ALE3EI_2504 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I ALE3EI_2504 IPR036188 FAD/NAD(P)-binding domain superfamily ALE3EI_2504 IPR023753 FAD/NAD(P)-binding domain ALE3EI_2504 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily ALE3EI_2504 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site ALE3EI_2504 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALE3EI_2506 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_2506 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2506 IPR011991 ArsR-like helix-turn-helix domain ALE3EI_2506 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ALE3EI_2506 IPR019888 Transcription regulator AsnC-type ALE3EI_2506 IPR011008 Dimeric alpha-beta barrel ALE3EI_2506 IPR000485 AsnC-type HTH domain ALE3EI_2506 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ALE3EI_2507 IPR006237 L-methionine gamma-lyase ALE3EI_2507 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_2507 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_2507 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme ALE3EI_2507 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_2512 IPR004770 Na+/H+ antiporter NhaC ALE3EI_2512 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal ALE3EI_2513 IPR019479 Peroxiredoxin, C-terminal ALE3EI_2513 IPR036249 Thioredoxin-like superfamily ALE3EI_2513 IPR013766 Thioredoxin domain ALE3EI_2513 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant ALE3EI_2513 IPR024706 Peroxiredoxin, AhpC-type ALE3EI_2514 IPR002065 Thiol peroxidase Tpx ALE3EI_2514 IPR013766 Thioredoxin domain ALE3EI_2514 IPR018219 Thiol peroxidase conserved site ALE3EI_2514 IPR013740 Redoxin ALE3EI_2514 IPR036249 Thioredoxin-like superfamily ALE3EI_2517 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2517 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2517 IPR036390 Winged helix DNA-binding domain superfamily ALE3EI_2517 IPR003593 AAA+ ATPase domain ALE3EI_2517 IPR025199 DNA translocase FtsK, 4TM region ALE3EI_2517 IPR041027 FtsK alpha domain ALE3EI_2517 IPR002543 FtsK domain ALE3EI_2517 IPR018541 FtsK gamma domain ALE3EI_2520 IPR036144 RibA-like superfamily ALE3EI_2520 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ALE3EI_2520 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB ALE3EI_2520 IPR000926 GTP cyclohydrolase II, RibA ALE3EI_2520 IPR016299 Riboflavin biosynthesis protein RibBA ALE3EI_2520 IPR032677 GTP cyclohydrolase II ALE3EI_2523 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2523 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_2523 IPR011110 Two component regulator propeller ALE3EI_2523 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ALE3EI_2523 IPR013783 Immunoglobulin-like fold ALE3EI_2523 IPR018062 HTH domain AraC-type, conserved site ALE3EI_2523 IPR018060 DNA binding HTH domain, AraC-type ALE3EI_2523 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_2523 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_2523 IPR005467 Histidine kinase domain ALE3EI_2523 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2523 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2523 IPR011006 CheY-like superfamily ALE3EI_2523 IPR009057 Homeobox-like domain superfamily ALE3EI_2523 IPR011123 Two component regulator three Y ALE3EI_2523 IPR015943 WD40/YVTN repeat-like-containing domain superfamily ALE3EI_2524 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ALE3EI_2524 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_2524 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_2524 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_2525 IPR029479 Nitroreductase ALE3EI_2525 IPR000415 Nitroreductase-like ALE3EI_2525 IPR033878 Nitroreductase NfsB-like ALE3EI_2531 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_2531 IPR006016 UspA ALE3EI_2531 IPR006015 Universal stress protein A family ALE3EI_2533 IPR017937 Thioredoxin, conserved site ALE3EI_2533 IPR005746 Thioredoxin ALE3EI_2533 IPR036249 Thioredoxin-like superfamily ALE3EI_2533 IPR013766 Thioredoxin domain ALE3EI_2537 IPR041328 ResE, histidine kinase sensor domain ALE3EI_2537 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_2537 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_2537 IPR003660 HAMP domain ALE3EI_2537 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_2537 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2537 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2537 IPR005467 Histidine kinase domain ALE3EI_2538 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_2538 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB ALE3EI_2538 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2538 IPR001867 OmpR/PhoB-type DNA-binding domain ALE3EI_2538 IPR011006 CheY-like superfamily ALE3EI_2538 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2538 IPR039420 Transcriptional regulatory protein WalR-like ALE3EI_2539 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_2539 IPR006015 Universal stress protein A family ALE3EI_2539 IPR006016 UspA ALE3EI_2543 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ALE3EI_2543 IPR001279 Metallo-beta-lactamase ALE3EI_2543 IPR022712 Beta-Casp domain ALE3EI_2543 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ALE3EI_2551 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ALE3EI_2551 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2551 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ALE3EI_2551 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ALE3EI_2551 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALE3EI_2552 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ALE3EI_2552 IPR006015 Universal stress protein A family ALE3EI_2552 IPR006016 UspA ALE3EI_2554 IPR036378 FAS1 domain superfamily ALE3EI_2554 IPR000782 FAS1 domain ALE3EI_2555 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ALE3EI_2555 IPR015943 WD40/YVTN repeat-like-containing domain superfamily ALE3EI_2555 IPR006311 Twin-arginine translocation pathway, signal sequence ALE3EI_2555 IPR008972 Cupredoxin ALE3EI_2555 IPR041114 Nitrous oxide reductase, propeller repeat 1 ALE3EI_2555 IPR023644 Nitrous-oxide reductase ALE3EI_2555 IPR034205 Nitrous-oxide reductase, C-terminal ALE3EI_2555 IPR011045 Nitrous oxide reductase, N-terminal ALE3EI_2555 IPR001505 Copper centre Cu(A) ALE3EI_2555 IPR002429 Cytochrome c oxidase subunit II-like C-terminal ALE3EI_2555 IPR041142 Nitrous oxide reductase, propeller repeat 2 ALE3EI_2560 IPR003593 AAA+ ATPase domain ALE3EI_2560 IPR022501 Gallidermin ABC transporter, ATP-binding subunit ALE3EI_2560 IPR003439 ABC transporter-like ALE3EI_2560 IPR017871 ABC transporter, conserved site ALE3EI_2560 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2565 IPR001036 Acriflavin resistance protein ALE3EI_2565 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALE3EI_2565 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA ALE3EI_2569 IPR023298 P-type ATPase, transmembrane domain superfamily ALE3EI_2569 IPR006121 Heavy metal-associated domain, HMA ALE3EI_2569 IPR017969 Heavy-metal-associated, conserved site ALE3EI_2569 IPR023299 P-type ATPase, cytoplasmic domain N ALE3EI_2569 IPR018303 P-type ATPase, phosphorylation site ALE3EI_2569 IPR008250 P-type ATPase, A domain superfamily ALE3EI_2569 IPR001757 P-type ATPase ALE3EI_2569 IPR027256 P-type ATPase, subfamily IB ALE3EI_2569 IPR036163 Heavy metal-associated domain superfamily ALE3EI_2569 IPR023214 HAD superfamily ALE3EI_2569 IPR036412 HAD-like superfamily ALE3EI_2571 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ALE3EI_2571 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA ALE3EI_2571 IPR001036 Acriflavin resistance protein ALE3EI_2574 IPR006311 Twin-arginine translocation pathway, signal sequence ALE3EI_2574 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ALE3EI_2574 IPR034282 Copper resistance protein CopA, second cupredoxin domain ALE3EI_2574 IPR034284 Copper resistance protein, first cupredoxin domain ALE3EI_2574 IPR034279 Copper resistance protein, third cupredoxin domain ALE3EI_2574 IPR002355 Multicopper oxidase, copper-binding site ALE3EI_2574 IPR033138 Multicopper oxidases, conserved site ALE3EI_2574 IPR006376 Copper-resistance protein CopA ALE3EI_2574 IPR011707 Multicopper oxidase, type 3 ALE3EI_2574 IPR011706 Multicopper oxidase, type 2 ALE3EI_2574 IPR001117 Multicopper oxidase, type 1 ALE3EI_2574 IPR008972 Cupredoxin ALE3EI_2578 IPR005524 Predicted permease DUF318 ALE3EI_2579 IPR008250 P-type ATPase, A domain superfamily ALE3EI_2579 IPR036412 HAD-like superfamily ALE3EI_2579 IPR023214 HAD superfamily ALE3EI_2579 IPR027256 P-type ATPase, subfamily IB ALE3EI_2579 IPR001757 P-type ATPase ALE3EI_2579 IPR023298 P-type ATPase, transmembrane domain superfamily ALE3EI_2579 IPR023299 P-type ATPase, cytoplasmic domain N ALE3EI_2579 IPR018303 P-type ATPase, phosphorylation site ALE3EI_2583 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ALE3EI_2583 IPR006143 RND efflux pump, membrane fusion protein ALE3EI_2596 IPR011006 CheY-like superfamily ALE3EI_2596 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2596 IPR005467 Histidine kinase domain ALE3EI_2596 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_2596 IPR000014 PAS domain ALE3EI_2596 IPR035965 PAS domain superfamily ALE3EI_2596 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2596 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_2596 IPR013656 PAS fold-4 ALE3EI_2596 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2596 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_2597 IPR002078 RNA polymerase sigma factor 54 interaction domain ALE3EI_2597 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2597 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ALE3EI_2597 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ALE3EI_2597 IPR025944 Sigma-54 interaction domain, conserved site ALE3EI_2597 IPR011006 CheY-like superfamily ALE3EI_2597 IPR009057 Homeobox-like domain superfamily ALE3EI_2597 IPR003593 AAA+ ATPase domain ALE3EI_2597 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2597 IPR002197 DNA binding HTH domain, Fis-type ALE3EI_2598 IPR039425 RNA polymerase sigma-70 like ALE3EI_2598 IPR014284 RNA polymerase sigma-70 like domain ALE3EI_2598 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ALE3EI_2598 IPR007627 RNA polymerase sigma-70 region 2 ALE3EI_2598 IPR013324 RNA polymerase sigma factor, region 3/4-like ALE3EI_2598 IPR013325 RNA polymerase sigma factor, region 2 ALE3EI_2598 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2598 IPR014286 RNA polymerase sigma-70 RpoE type ALE3EI_2598 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ALE3EI_2602 IPR014362 Glutamate dehydrogenase ALE3EI_2602 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2602 IPR033524 Leu/Phe/Val dehydrogenases active site ALE3EI_2602 IPR033922 NAD(P) binding domain of glutamate dehydrogenase ALE3EI_2602 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain ALE3EI_2602 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase ALE3EI_2602 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal ALE3EI_2603 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily ALE3EI_2603 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily ALE3EI_2603 IPR023459 Transcription elongation factor GreA/GreB family ALE3EI_2603 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal ALE3EI_2603 IPR028624 Transcription elongation factor GreA/GreB ALE3EI_2603 IPR006359 Transcription elongation factor GreA ALE3EI_2603 IPR018151 Transcription elongation factor, GreA/GreB, conserved site ALE3EI_2603 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal ALE3EI_2607 IPR001763 Rhodanese-like domain ALE3EI_2607 IPR036873 Rhodanese-like domain superfamily ALE3EI_2607 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ALE3EI_2607 IPR001279 Metallo-beta-lactamase ALE3EI_2610 IPR024078 Putative deacetylase LmbE-like domain superfamily ALE3EI_2610 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related ALE3EI_2610 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 ALE3EI_2611 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme ALE3EI_2611 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_2611 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_2611 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_2612 IPR006680 Amidohydrolase-related ALE3EI_2612 IPR005920 Imidazolonepropionase ALE3EI_2612 IPR011059 Metal-dependent hydrolase, composite domain superfamily ALE3EI_2612 IPR032466 Metal-dependent hydrolase ALE3EI_2613 IPR020855 Ureohydrolase, manganese-binding site ALE3EI_2613 IPR023696 Ureohydrolase domain superfamily ALE3EI_2613 IPR006035 Ureohydrolase ALE3EI_2613 IPR005923 Formiminoglutamase ALE3EI_2614 IPR012886 Formiminotransferase, N-terminal subdomain ALE3EI_2614 IPR022384 Formiminotransferase catalytic domain superfamily ALE3EI_2614 IPR037064 Formiminotransferase, N-terminal subdomain superfamily ALE3EI_2614 IPR004227 Formiminotransferase catalytic domain ALE3EI_2614 IPR037070 Formiminotransferase, C-terminal subdomain superfamily ALE3EI_2614 IPR013802 Formiminotransferase, C-terminal subdomain ALE3EI_2618 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ALE3EI_2618 IPR039426 Vitamin B12 transporter BtuB-like ALE3EI_2618 IPR012910 TonB-dependent receptor, plug domain ALE3EI_2618 IPR010916 TonB box, conserved site ALE3EI_2618 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_2618 IPR010917 TonB-dependent receptor, conserved site ALE3EI_2618 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_2621 IPR011042 Six-bladed beta-propeller, TolB-like ALE3EI_2621 IPR029058 Alpha/Beta hydrolase fold ALE3EI_2621 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ALE3EI_2621 IPR011659 WD40-like Beta Propeller ALE3EI_2623 IPR017871 ABC transporter, conserved site ALE3EI_2623 IPR003593 AAA+ ATPase domain ALE3EI_2623 IPR032781 ABC-transporter extension domain ALE3EI_2623 IPR003439 ABC transporter-like ALE3EI_2623 IPR022374 Energy-dependent translational throttle protein EttA ALE3EI_2623 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2625 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal ALE3EI_2625 IPR029045 ClpP/crotonase-like domain superfamily ALE3EI_2625 IPR034733 Acetyl-CoA carboxylase ALE3EI_2625 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal ALE3EI_2629 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_2629 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site ALE3EI_2629 IPR023996 TonB-dependent outer membrane protein, SusC/RagA ALE3EI_2629 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_2629 IPR012910 TonB-dependent receptor, plug domain ALE3EI_2629 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ALE3EI_2629 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily ALE3EI_2630 IPR025110 AMP-binding enzyme, C-terminal domain ALE3EI_2630 IPR000873 AMP-dependent synthetase/ligase ALE3EI_2630 IPR042099 AMP-dependent synthetase-like superfamily ALE3EI_2630 IPR020845 AMP-binding, conserved site ALE3EI_2632 IPR034603 Dipeptide epimerase ALE3EI_2632 IPR036849 Enolase-like, C-terminal domain superfamily ALE3EI_2632 IPR029017 Enolase-like, N-terminal ALE3EI_2632 IPR029065 Enolase C-terminal domain-like ALE3EI_2632 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site ALE3EI_2632 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ALE3EI_2632 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ALE3EI_2633 IPR001279 Metallo-beta-lactamase ALE3EI_2633 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ALE3EI_2633 IPR022877 Protein of unknown funcion UPF0173 ALE3EI_2634 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase ALE3EI_2634 IPR000537 UbiA prenyltransferase family ALE3EI_2634 IPR026046 UbiA prenyltransferase domain containing protein 1 ALE3EI_2639 IPR001173 Glycosyltransferase 2-like ALE3EI_2639 IPR001296 Glycosyl transferase, family 1 ALE3EI_2639 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_2643 IPR006070 YrdC-like domain ALE3EI_2643 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ALE3EI_2645 IPR014017 UvrD-like DNA helicase, C-terminal ALE3EI_2645 IPR013986 DExx box DNA helicase domain superfamily ALE3EI_2645 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2645 IPR014016 UvrD-like helicase, ATP-binding domain ALE3EI_2645 IPR000212 DNA helicase, UvrD/REP type ALE3EI_2645 IPR034739 UvrD/AddA helicase, N-terminal ALE3EI_2645 IPR005751 ATP-dependent DNA helicase PcrA ALE3EI_2646 IPR011650 Peptidase M20, dimerisation domain ALE3EI_2646 IPR002933 Peptidase M20 ALE3EI_2646 IPR036264 Bacterial exopeptidase dimerisation domain ALE3EI_2646 IPR017439 Amidohydrolase ALE3EI_2647 IPR027283 Glutamate synthase large subunit-like protein, bacteria ALE3EI_2647 IPR024188 Glutamate synthase large subunit-like protein ALE3EI_2647 IPR002932 Glutamate synthase domain ALE3EI_2647 IPR013785 Aldolase-type TIM barrel ALE3EI_2648 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2648 IPR007492 LytTR DNA-binding domain ALE3EI_2648 IPR011006 CheY-like superfamily ALE3EI_2649 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region ALE3EI_2649 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2649 IPR029016 GAF-like domain superfamily ALE3EI_2649 IPR010559 Signal transduction histidine kinase, internal region ALE3EI_2649 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2653 IPR014782 Peptidase M1, membrane alanine aminopeptidase ALE3EI_2653 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase ALE3EI_2653 IPR042097 Aminopeptidase N-like , N-terminal ALE3EI_2653 IPR024571 ERAP1-like C-terminal domain ALE3EI_2653 IPR012778 Peptidase M1, aminopeptidase ALE3EI_2654 IPR014001 Helicase superfamily 1/2, ATP-binding domain ALE3EI_2654 IPR001650 Helicase, C-terminal ALE3EI_2654 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_2654 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2654 IPR033454 RecG, wedge domain ALE3EI_2654 IPR011545 DEAD/DEAH box helicase domain ALE3EI_2654 IPR004609 ATP-dependent DNA helicase RecG ALE3EI_2657 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily ALE3EI_2657 IPR005146 B3/B4 tRNA-binding domain ALE3EI_2657 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain ALE3EI_2657 IPR005147 tRNA synthetase, B5-domain ALE3EI_2657 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain ALE3EI_2657 IPR002547 tRNA-binding domain ALE3EI_2657 IPR005121 Ferrodoxin-fold anticodon-binding domain ALE3EI_2657 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit ALE3EI_2657 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_2657 IPR009061 Putative DNA-binding domain superfamily ALE3EI_2657 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 ALE3EI_2661 IPR032781 ABC-transporter extension domain ALE3EI_2661 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2661 IPR003593 AAA+ ATPase domain ALE3EI_2661 IPR003439 ABC transporter-like ALE3EI_2663 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial ALE3EI_2663 IPR018225 Transaldolase, active site ALE3EI_2663 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase ALE3EI_2663 IPR022999 Transaldolase type 3B, putative ALE3EI_2663 IPR001585 Transaldolase/Fructose-6-phosphate aldolase ALE3EI_2663 IPR013785 Aldolase-type TIM barrel ALE3EI_2664 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2664 IPR002347 Short-chain dehydrogenase/reductase SDR ALE3EI_2664 IPR020904 Short-chain dehydrogenase/reductase, conserved site ALE3EI_2667 IPR012156 Cold shock, CspA ALE3EI_2667 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_2667 IPR002059 Cold-shock protein, DNA-binding ALE3EI_2667 IPR019844 Cold-shock (CSD) domain ALE3EI_2667 IPR011129 Cold shock domain ALE3EI_2669 IPR022394 Methylamine utilisation protein, MauG ALE3EI_2669 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase ALE3EI_2669 IPR009056 Cytochrome c-like domain ALE3EI_2669 IPR036909 Cytochrome c-like domain superfamily ALE3EI_2669 IPR004852 Di-haem cytochrome c peroxidase ALE3EI_2672 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site ALE3EI_2672 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ALE3EI_2672 IPR039429 Serine hydroxymethyltransferase-like domain ALE3EI_2672 IPR015424 Pyridoxal phosphate-dependent transferase ALE3EI_2672 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ALE3EI_2672 IPR001085 Serine hydroxymethyltransferase ALE3EI_2676 IPR019489 Clp ATPase, C-terminal ALE3EI_2676 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2676 IPR041546 ClpA/ClpB, AAA lid domain ALE3EI_2676 IPR028299 ClpA/B, conserved site 2 ALE3EI_2676 IPR018368 ClpA/B, conserved site 1 ALE3EI_2676 IPR001270 ClpA/B family ALE3EI_2676 IPR003593 AAA+ ATPase domain ALE3EI_2676 IPR003959 ATPase, AAA-type, core ALE3EI_2676 IPR017730 Chaperonin ClpB ALE3EI_2676 IPR004176 Clp, N-terminal ALE3EI_2676 IPR036628 Clp, N-terminal domain superfamily ALE3EI_2677 IPR013572 Transcription regulator MAATS, C-terminal ALE3EI_2677 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ALE3EI_2677 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ALE3EI_2677 IPR009057 Homeobox-like domain superfamily ALE3EI_2677 IPR001647 DNA-binding HTH domain, TetR-type ALE3EI_2684 IPR020081 SsrA-binding protein, conserved site ALE3EI_2684 IPR000037 SsrA-binding protein ALE3EI_2684 IPR023620 Small protein B ALE3EI_2685 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site ALE3EI_2685 IPR023996 TonB-dependent outer membrane protein, SusC/RagA ALE3EI_2685 IPR000531 TonB-dependent receptor-like, beta-barrel ALE3EI_2685 IPR008969 Carboxypeptidase-like, regulatory domain superfamily ALE3EI_2685 IPR012910 TonB-dependent receptor, plug domain ALE3EI_2685 IPR037066 TonB-dependent receptor, plug domain superfamily ALE3EI_2688 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase ALE3EI_2688 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_2689 IPR004104 Oxidoreductase, C-terminal ALE3EI_2689 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2689 IPR000683 Oxidoreductase, N-terminal ALE3EI_2690 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site ALE3EI_2690 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ALE3EI_2690 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal ALE3EI_2690 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ALE3EI_2690 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ALE3EI_2690 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2690 IPR022694 3-hydroxyacyl-CoA dehydrogenase ALE3EI_2692 IPR001608 Alanine racemase, N-terminal ALE3EI_2692 IPR011078 Pyridoxal phosphate homeostasis protein ALE3EI_2692 IPR029066 PLP-binding barrel ALE3EI_2693 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain ALE3EI_2693 IPR036397 Ribonuclease H superfamily ALE3EI_2693 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain ALE3EI_2693 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type ALE3EI_2693 IPR003141 Polymerase/histidinol phosphatase, N-terminal ALE3EI_2693 IPR004013 PHP domain ALE3EI_2693 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ALE3EI_2693 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_2693 IPR029460 DNA polymerase, helix-hairpin-helix motif ALE3EI_2693 IPR012337 Ribonuclease H-like superfamily ALE3EI_2693 IPR013520 Exonuclease, RNase T/DNA polymerase III ALE3EI_2693 IPR024754 DNA polymerase III polC-like, N-terminal domain II ALE3EI_2693 IPR040982 DNA polymerase III alpha subunit finger domain ALE3EI_2694 IPR018488 Cyclic nucleotide-binding, conserved site ALE3EI_2694 IPR028325 Voltage-gated potassium channel ALE3EI_2694 IPR014710 RmlC-like jelly roll fold ALE3EI_2694 IPR005821 Ion transport domain ALE3EI_2694 IPR018490 Cyclic nucleotide-binding-like ALE3EI_2694 IPR000595 Cyclic nucleotide-binding domain ALE3EI_2695 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2695 IPR018022 IPP transferase ALE3EI_2695 IPR039657 Dimethylallyltransferase ALE3EI_2696 IPR001789 Signal transduction response regulator, receiver domain ALE3EI_2696 IPR016032 Signal transduction response regulator, C-terminal effector ALE3EI_2696 IPR011006 CheY-like superfamily ALE3EI_2696 IPR001867 OmpR/PhoB-type DNA-binding domain ALE3EI_2696 IPR039420 Transcriptional regulatory protein WalR-like ALE3EI_2696 IPR036388 Winged helix-like DNA-binding domain superfamily ALE3EI_2697 IPR003594 Histidine kinase/HSP90-like ATPase ALE3EI_2697 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ALE3EI_2697 IPR005467 Histidine kinase domain ALE3EI_2697 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ALE3EI_2697 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ALE3EI_2697 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ALE3EI_2698 IPR001977 Dephospho-CoA kinase ALE3EI_2698 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2700 IPR029044 Nucleotide-diphospho-sugar transferases ALE3EI_2700 IPR001173 Glycosyltransferase 2-like ALE3EI_2700 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase ALE3EI_2703 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) ALE3EI_2703 IPR036291 NAD(P)-binding domain superfamily ALE3EI_2704 IPR004604 DNA recombination/repair protein RecN ALE3EI_2704 IPR027417 P-loop containing nucleoside triphosphate hydrolase ALE3EI_2704 IPR003395 RecF/RecN/SMC, N-terminal ALE3EI_2706 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal ALE3EI_2706 IPR003382 Flavoprotein ALE3EI_2706 IPR036551 Flavin prenyltransferase-like ALE3EI_2706 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC ALE3EI_2706 IPR035929 CoaB-like superfamily ALE3EI_2709 IPR013785 Aldolase-type TIM barrel ALE3EI_2709 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA ALE3EI_2709 IPR020625 Schiff base-forming aldolase, active site ALE3EI_2709 IPR002220 DapA-like ALE3EI_2711 IPR001357 BRCT domain ALE3EI_2711 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 ALE3EI_2711 IPR036420 BRCT domain superfamily ALE3EI_2711 IPR041663 DisA/LigA, helix-hairpin-helix motif ALE3EI_2711 IPR001679 NAD-dependent DNA ligase ALE3EI_2711 IPR013839 NAD-dependent DNA ligase, adenylation ALE3EI_2711 IPR013840 NAD-dependent DNA ligase, N-terminal ALE3EI_2711 IPR012340 Nucleic acid-binding, OB-fold ALE3EI_2711 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type ALE3EI_2711 IPR010994 RuvA domain 2-like ALE3EI_2711 IPR004150 NAD-dependent DNA ligase, OB-fold ALE3EI_2712 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ALE3EI_2712 IPR031100 LOG family ALE3EI_2713 IPR007848 Methyltransferase small domain ALE3EI_2713 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ALE3EI_2713 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific ALE3EI_2713 IPR040758 Release factor glutamine methyltransferase, N-terminal domain ALE3EI_2713 IPR004556 Methyltransferase HemK-like ALE3EI_2713 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ALE3EI_2715 IPR016193 Cytidine deaminase-like ALE3EI_2715 IPR002125 Cytidine and deoxycytidylate deaminase domain ALE3EI_2715 IPR016192 APOBEC/CMP deaminase, zinc-binding ALE3EI_2715 IPR024072 Dihydrofolate reductase-like domain superfamily ALE3EI_2715 IPR004794 Riboflavin biosynthesis protein RibD ALE3EI_2715 IPR011549 Riboflavin-specific deaminase, C-terminal ALE3EI_2715 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal ALE3EI_2717 IPR015796 Impact family, bacterial/archaeal ALE3EI_2717 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal ALE3EI_2717 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site ALE3EI_2717 IPR023582 Impact family ALE3EI_2717 IPR035647 EF-G domain III/V-like ALE3EI_2717 IPR001498 Impact, N-terminal ALE3EI_2717 IPR036956 Impact, N-terminal domain superfamily ALE3EI_2717 IPR020568 Ribosomal protein S5 domain 2-type fold