locus-tag	class	description
LVJ80_00005	COG4783	chaperone-mediated protein folding
LVJ80_00025	COG1278	Cold shock
LVJ80_00045	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LVJ80_00045	COG0512	Glutamine amidotransferase of anthranilate synthase
LVJ80_00055	COG2954	triphosphatase activity
LVJ80_00060	COG1981	membrane
LVJ80_00125	COG1505	serine-type exopeptidase activity
LVJ80_00130	COG1234	tRNA 3'-trailer cleavage
LVJ80_00165	COG2315	Protein conserved in bacteria
LVJ80_00210	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LVJ80_00230	COG3552	Protein containing von Willebrand factor type A (VWA) domain
LVJ80_00300	COG0429	hydrolase of the alpha beta-hydrolase fold
LVJ80_00315	COG0644	oxidoreductase
LVJ80_00315	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
LVJ80_00345	COG0195	Participates in both transcription termination and antitermination
LVJ80_00360	COG1070	Carbohydrate kinase
LVJ80_00390	COG1203	CRISPR-associated helicase, Cas3
LVJ80_00425	COG0791	NLP P60 protein
LVJ80_00430	COG0346	lactoylglutathione lyase activity
LVJ80_00435	COG0613	PHP domain protein
LVJ80_00440	COG0546	phosphoglycolate phosphatase activity
LVJ80_00450	COG0514	ATP-dependent DNA helicase (RecQ)
LVJ80_00520	COG0697	spore germination
LVJ80_00555	COG4535	Mg2 and Co2 transporter CorC
LVJ80_00565	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ80_00625	COG2951	lytic endotransglycosylase activity
LVJ80_00635	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LVJ80_00645	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LVJ80_00660	COG2189	Belongs to the N(4) N(6)-methyltransferase family
LVJ80_00705	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LVJ80_00735	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LVJ80_00780	COG3909	cytochrome
LVJ80_00925	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LVJ80_00950	COG0477	Major facilitator Superfamily
LVJ80_00990	COG0799	negative regulation of ribosome biogenesis
LVJ80_01005	COG0471	metal ion transport
LVJ80_01020	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LVJ80_01045	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LVJ80_01065	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
LVJ80_01130	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LVJ80_01155	COG0800	Aldolase
LVJ80_01195	COG0494	nUDIX hydrolase
LVJ80_01200	COG0837	glucose binding
LVJ80_01200	COG1737	Transcriptional regulator
LVJ80_01215	COG4636	protein conserved in cyanobacteria
LVJ80_01225	COG0586	Pfam SNARE associated Golgi protein
LVJ80_01240	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LVJ80_01255	COG0196	riboflavin kinase activity
LVJ80_01315	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LVJ80_01335	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LVJ80_01425	COG0551	DNA topoisomerase type I activity
LVJ80_01425	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LVJ80_01430	COG3736	Type IV secretory pathway, component VirB8
LVJ80_01455	COG3505	Type IV secretory pathway VirD4
LVJ80_01550	COG0582	viral genome integration into host DNA
LVJ80_01570	COG2814	Major facilitator Superfamily
LVJ80_01580	COG1643	Atp-dependent helicase
LVJ80_01610	COG0513	Belongs to the DEAD box helicase family
LVJ80_01620	COG0765	amino acid transport
LVJ80_01625	COG0129	dihydroxy-acid dehydratase activity
LVJ80_01640	COG0633	Ferredoxin
LVJ80_01660	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LVJ80_01660	COG0758	DNA mediated transformation
LVJ80_01665	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LVJ80_01725	COG0308	aminopeptidase N
LVJ80_01785	COG1620	l-lactate permease
LVJ80_01795	COG1620	l-lactate permease
LVJ80_01835	COG0247	lactate metabolic process
LVJ80_01850	COG2070	2-Nitropropane dioxygenase
LVJ80_01885	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
LVJ80_01905	COG1739	Uncharacterized protein family UPF0029
LVJ80_01935	COG3738	Protein conserved in bacteria
LVJ80_01960	COG1690	Belongs to the RtcB family
LVJ80_01965	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LVJ80_01985	COG1846	Transcriptional regulator
LVJ80_01990	COG0142	geranyltranstransferase activity
LVJ80_02035	COG2226	methyltransferase
LVJ80_02060	COG0393	Putative heavy-metal-binding
LVJ80_02080	COG2884	Cell division ATP-binding protein ftsE
LVJ80_02130	COG0142	geranyltranstransferase activity
LVJ80_02140	COG1132	(ABC) transporter
LVJ80_02150	COG2351	hydroxyisourate hydrolase activity
LVJ80_02170	COG0859	PFAM glycosyl transferase family 9
LVJ80_02180	COG0742	ribosomal rna small subunit methyltransferase
LVJ80_02185	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
LVJ80_02320	COG3012	SEC-C Motif Domain Protein
LVJ80_02350	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ80_02360	COG4948	Mandelate Racemase Muconate Lactonizing
LVJ80_02370	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ80_02380	COG1129	ABC transporter
LVJ80_02450	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LVJ80_02545	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LVJ80_02630	COG0200	Binds to the 23S rRNA
LVJ80_02635	COG0201	protein transport
LVJ80_02645	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LVJ80_02680	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LVJ80_02770	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LVJ80_02775	COG1408	metallophosphoesterase
LVJ80_02780	COG3842	ATPase activity
LVJ80_02805	COG2610	gluconate transmembrane transporter activity
LVJ80_02810	COG3265	gluconokinase activity
LVJ80_02880	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LVJ80_02910	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
LVJ80_02975	COG2252	PERMEase
LVJ80_03020	COG1335	isochorismatase
LVJ80_03025	COG1175	transmembrane transport
LVJ80_03030	COG0385	Bile acid
LVJ80_03080	COG1943	Transposase
LVJ80_03095	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LVJ80_03140	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LVJ80_03150	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LVJ80_03155	COG1040	competence protein
LVJ80_03185	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
LVJ80_03190	COG2827	Endonuclease containing a URI domain
LVJ80_03220	COG0860	N-Acetylmuramoyl-L-alanine amidase
LVJ80_03250	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
LVJ80_03270	COG0514	ATP-dependent DNA helicase (RecQ)
LVJ80_03290	COG1609	Transcriptional regulator
LVJ80_03335	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LVJ80_03360	COG2824	Alkylphosphonate utilization operon protein PhnA
LVJ80_03365	COG0489	protein tyrosine kinase activity
LVJ80_03365	COG3206	protein involved in exopolysaccharide biosynthesis
LVJ80_03370	COG0583	DNA-binding transcription factor activity
LVJ80_03380	COG1765	OsmC-like protein
LVJ80_03385	COG0037	tRNA processing
LVJ80_03395	COG0795	lipopolysaccharide-transporting ATPase activity
LVJ80_03410	COG1733	regulation of RNA biosynthetic process
LVJ80_03420	COG2259	Doxx family
LVJ80_03425	COG0625	glutathione transferase activity
LVJ80_03440	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LVJ80_03445	COG1902	pentaerythritol trinitrate reductase activity
LVJ80_03455	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
LVJ80_03465	COG0732	type I restriction modification DNA specificity domain
LVJ80_03485	COG0210	DNA helicase
LVJ80_03505	COG0778	Nitroreductase
LVJ80_03520	COG0542	response to heat
LVJ80_03530	COG0583	DNA-binding transcription factor activity
LVJ80_03610	COG2828	Protein conserved in bacteria
LVJ80_03625	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LVJ80_03700	COG2608	mercury ion transmembrane transporter activity
LVJ80_03710	COG2217	Heavy metal translocating P-type atpase
LVJ80_03835	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
LVJ80_03870	COG0839	Belongs to the complex I subunit 6 family
LVJ80_03925	COG0582	viral genome integration into host DNA
LVJ80_03990	COG1183	phosphatidylcholine synthase activity
LVJ80_04005	COG0628	permease
LVJ80_04040	COG0424	maF-like protein
LVJ80_04060	COG3304	Inner membrane component domain
LVJ80_04095	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LVJ80_04100	COG1929	Belongs to the glycerate kinase type-1 family
LVJ80_04120	COG0729	surface antigen
LVJ80_04125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ80_04130	COG3263	regulation of cellular component size
LVJ80_04170	COG3945	hemerythrin HHE cation binding domain
LVJ80_04180	COG2833	Protein of unknown function (DUF455)
LVJ80_04220	COG1793	dna ligase
LVJ80_04230	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
LVJ80_04235	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
LVJ80_04250	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
LVJ80_04265	COG2321	neutral zinc metallopeptidase
LVJ80_04280	COG0259	pyridoxamine-phosphate oxidase activity
LVJ80_04300	COG0592	DNA-directed DNA polymerase activity
LVJ80_04320	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LVJ80_04330	COG0307	riboflavin synthase, alpha
LVJ80_04340	COG0477	Major facilitator Superfamily
LVJ80_04350	COG1217	gtp-binding protein TYPA
LVJ80_04365	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LVJ80_04415	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LVJ80_04445	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ80_04450	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LVJ80_04460	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LVJ80_04495	COG1596	polysaccharide export
LVJ80_04495	COG1555	photosystem II stabilization
LVJ80_04595	COG0582	viral genome integration into host DNA
LVJ80_04630	COG0583	DNA-binding transcription factor activity
LVJ80_04645	COG0723	plastoquinol--plastocyanin reductase activity
LVJ80_04665	COG1247	-acetyltransferase
LVJ80_04740	COG1011	Hydrolase
LVJ80_04830	COG2116	formate transmembrane transporter activity
LVJ80_04865	COG0187	DNA topoisomerase II activity
LVJ80_04885	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LVJ80_04930	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LVJ80_04970	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LVJ80_04990	COG0582	viral genome integration into host DNA
LVJ80_05110	COG0561	phosphatase activity
LVJ80_05135	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LVJ80_05155	COG2217	Heavy metal translocating P-type atpase
LVJ80_05160	COG1238	metal cluster binding
LVJ80_05180	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ80_05190	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LVJ80_05225	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LVJ80_05250	COG0058	SHG alpha-glucan phosphorylase activity
LVJ80_05270	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LVJ80_05310	COG0237	dephospho-CoA kinase activity
LVJ80_05315	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
LVJ80_05330	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LVJ80_05375	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ80_05405	COG1959	2 iron, 2 sulfur cluster binding
LVJ80_05430	COG1519	Transferase
LVJ80_05470	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
LVJ80_05480	COG4452	Inner membrane protein CreD
LVJ80_05485	COG0745	RESPONSE REGULATOR receiver
LVJ80_05490	COG2205	protein histidine kinase activity
LVJ80_05495	COG2195	Cleaves the N-terminal amino acid of tripeptides
LVJ80_05510	COG2885	chlorophyll binding
LVJ80_05515	COG2814	Major facilitator Superfamily
LVJ80_05520	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LVJ80_05560	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
LVJ80_05565	COG0517	IMP dehydrogenase activity
LVJ80_05565	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
LVJ80_05595	COG3383	formate dehydrogenase (NAD+) activity
LVJ80_05595	COG0243	molybdopterin cofactor binding
LVJ80_05600	COG0243	molybdopterin cofactor binding
LVJ80_05600	COG3383	formate dehydrogenase (NAD+) activity
LVJ80_05605	COG0437	4 iron, 4 sulfur cluster binding
LVJ80_05610	COG2864	formate dehydrogenase
LVJ80_05625	COG3058	Necessary for formate dehydrogenase activity
LVJ80_05650	COG0805	protein transport
LVJ80_05655	COG1127	ABC transporter
LVJ80_05665	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
LVJ80_05670	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LVJ80_05685	COG2853	Lipoprotein
LVJ80_05695	COG0824	Thioesterase
LVJ80_05800	COG1214	PFAM Peptidase M22, glycoprotease
LVJ80_05835	COG0545	Peptidyl-prolyl cis-trans isomerase
LVJ80_05890	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LVJ80_05910	COG3541	Predicted nucleotidyltransferase
LVJ80_05920	COG2814	Major facilitator Superfamily
LVJ80_05925	COG2271	Major facilitator Superfamily
LVJ80_05935	COG3045	CreA protein
LVJ80_05980	COG3842	ATPase activity
LVJ80_05990	COG0009	L-threonylcarbamoyladenylate synthase
LVJ80_06000	COG2999	glutathione oxidoreductase activity
LVJ80_06040	COG4615	Cyclic peptide transporter
LVJ80_06080	COG0737	Belongs to the 5'-nucleotidase family
LVJ80_06125	COG0602	queuosine metabolic process
LVJ80_06130	COG0589	response to stress
LVJ80_06135	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LVJ80_06150	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LVJ80_06155	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LVJ80_06160	COG0521	Mo-molybdopterin cofactor biosynthetic process
LVJ80_06165	COG0746	molybdenum cofactor guanylyltransferase activity
LVJ80_06175	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LVJ80_06180	COG0314	molybdopterin synthase activity
LVJ80_06190	COG2189	Belongs to the N(4) N(6)-methyltransferase family
LVJ80_06220	COG3217	Mosc domain protein beta barrel domain protein
LVJ80_06220	COG0633	Ferredoxin
LVJ80_06240	COG3133	Outer membrane lipoprotein
LVJ80_06260	COG0248	Ppx GppA phosphatase
LVJ80_06265	COG2814	Major facilitator Superfamily
LVJ80_06295	COG1696	Membrane protein involved in D-alanine export
LVJ80_06300	COG2879	small protein
LVJ80_06325	COG0626	cystathionine gamma-synthase activity
LVJ80_06360	COG0494	nUDIX hydrolase
LVJ80_06375	COG0739	heme binding
LVJ80_06440	COG0442	prolyl-tRNA aminoacylation
LVJ80_06470	COG1289	transmembrane transporter activity
LVJ80_06490	COG2814	Major facilitator Superfamily
LVJ80_06520	COG0560	Phosphoserine phosphatase
LVJ80_06525	COG4804	nuclease activity
LVJ80_06540	COG0519	Catalyzes the synthesis of GMP from XMP
LVJ80_06575	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LVJ80_06610	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LVJ80_06620	COG0330	HflC and HflK could
LVJ80_06655	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
LVJ80_06665	COG1522	sequence-specific DNA binding
LVJ80_06670	COG2962	Rard protein
LVJ80_06675	COG1476	TRANSCRIPTIONal
LVJ80_06680	COG4735	regulation of single-species biofilm formation
LVJ80_06700	COG3040	lipid binding
LVJ80_06715	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LVJ80_06735	COG1086	Polysaccharide biosynthesis protein
LVJ80_06775	COG2244	polysaccharide biosynthetic process
LVJ80_06780	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
LVJ80_06790	COG1216	Glycosyl transferase, family 2
LVJ80_06790	COG1442	glycosyl transferase family 8
LVJ80_06800	COG2244	polysaccharide biosynthetic process
LVJ80_06805	COG2244	polysaccharide biosynthetic process
LVJ80_06815	COG2089	acid synthase
LVJ80_06855	COG1129	ABC transporter
LVJ80_06860	COG4211	Belongs to the binding-protein-dependent transport system permease family
LVJ80_06880	COG4373	Mu-like prophage FluMu protein gp28
LVJ80_07000	COG4382	Mu-like prophage protein Gp16
LVJ80_07120	COG3392	D12 class N6 adenine-specific DNA methyltransferase
LVJ80_07130	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LVJ80_07135	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LVJ80_07145	COG1083	cytidylyl-transferase
LVJ80_07150	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LVJ80_07155	COG1086	Polysaccharide biosynthesis protein
LVJ80_07160	COG0483	inositol monophosphate 1-phosphatase activity
LVJ80_07165	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LVJ80_07170	COG0251	oxidation-reduction process
LVJ80_07180	COG1619	proteins homologs of microcin C7 resistance protein MccF
LVJ80_07190	COG0772	Belongs to the SEDS family
LVJ80_07195	COG0768	penicillin binding
LVJ80_07210	COG1077	Cell shape determining protein MreB Mrl
LVJ80_07270	COG0338	D12 class N6 adenine-specific DNA methyltransferase
LVJ80_07295	COG2975	iron-sulfur cluster assembly
LVJ80_07310	COG0494	nUDIX hydrolase
LVJ80_07320	COG5266	PFAM Nickel transport complex, NikM subunit, transmembrane
LVJ80_07370	COG1984	allophanate hydrolase subunit 2
LVJ80_07375	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LVJ80_07395	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LVJ80_07410	COG1192	Involved in chromosome partitioning
LVJ80_07415	COG0688	phosphatidylethanolamine metabolic process
LVJ80_07420	COG0688	phosphatidylethanolamine metabolic process
LVJ80_07520	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ80_07590	COG0338	D12 class N6 adenine-specific DNA methyltransferase
LVJ80_07615	COG2975	iron-sulfur cluster assembly
LVJ80_07630	COG0494	nUDIX hydrolase
LVJ80_07640	COG5266	PFAM Nickel transport complex, NikM subunit, transmembrane
LVJ80_07700	COG1984	allophanate hydrolase subunit 2
LVJ80_07705	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LVJ80_07750	COG0688	phosphatidylethanolamine metabolic process
LVJ80_07770	COG1045	serine acetyltransferase
LVJ80_07790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ80_07795	COG1126	abc transporter atp-binding protein
LVJ80_07805	COG0765	amino acid transport
LVJ80_07860	COG0508	dehydrogenase complex catalyzes the overall conversion of
LVJ80_07875	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
LVJ80_07880	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LVJ80_07905	COG4942	peptidase
LVJ80_07915	COG4178	(ABC) transporter
LVJ80_07975	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LVJ80_07990	COG2431	L-lysine efflux transmembrane transporter activity
LVJ80_08005	COG0859	PFAM glycosyl transferase family 9
LVJ80_08015	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LVJ80_08020	COG2274	protein secretion by the type I secretion system
LVJ80_08040	COG2070	2-Nitropropane dioxygenase
LVJ80_08050	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LVJ80_08065	COG0708	Exodeoxyribonuclease III
LVJ80_08095	COG0586	Pfam SNARE associated Golgi protein
LVJ80_08115	COG0544	peptidyl-prolyl cis-trans isomerase activity
LVJ80_08120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ80_08130	COG2267	carboxylic ester hydrolase activity
LVJ80_08135	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LVJ80_08420	COG1196	nuclear chromosome segregation
LVJ80_08420	COG0739	heme binding
LVJ80_08420	COG0741	lytic transglycosylase activity
LVJ80_08450	COG0163	prenyltransferase activity
LVJ80_08470	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LVJ80_08475	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ80_08490	COG2194	sulfuric ester hydrolase activity
LVJ80_08495	COG1473	amidohydrolase
LVJ80_08505	COG0179	Fumarylacetoacetate (FAA) hydrolase
LVJ80_08515	COG0497	DNA recombination
LVJ80_08535	COG0277	FAD linked oxidase domain protein
LVJ80_08555	COG0501	Belongs to the peptidase M48B family
LVJ80_08565	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LVJ80_08595	COG1971	Probably functions as a manganese efflux pump
LVJ80_08605	COG2233	PERMEase
LVJ80_08630	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LVJ80_08635	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
LVJ80_08680	COG0318	PFAM AMP-dependent synthetase and ligase
LVJ80_08685	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LVJ80_08690	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LVJ80_08715	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
LVJ80_08760	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
LVJ80_08775	COG2814	Major facilitator Superfamily
LVJ80_08790	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
LVJ80_08795	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
LVJ80_08820	COG0084	hydrolase, TatD family'
LVJ80_08850	COG1876	peptidase activity
LVJ80_08870	COG4149	molybdate abc transporter
LVJ80_08875	COG0725	ABC transporter, periplasmic molybdate-binding protein
LVJ80_08900	COG1742	UPF0060 membrane protein
LVJ80_08925	COG1301	dicarboxylic acid transport
LVJ80_08955	COG0210	DNA helicase
LVJ80_08970	COG0569	domain protein
LVJ80_08990	COG2201	protein-glutamate methylesterase activity
LVJ80_09005	COG0406	alpha-ribazole phosphatase activity
LVJ80_09010	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LVJ80_09025	COG1275	C4-dicarboxylate transporter malic acid transport protein
LVJ80_09075	COG0531	amino acid
LVJ80_09080	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LVJ80_09090	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LVJ80_09100	COG3977	Valine--pyruvate aminotransferase
LVJ80_09120	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LVJ80_09120	COG2813	Specifically methylates the guanine in position
LVJ80_09135	COG0477	Major facilitator Superfamily
LVJ80_09140	COG0431	NADPH-dependent FMN reductase
LVJ80_09155	COG3878	Protein conserved in bacteria
LVJ80_09175	COG2962	Rard protein
LVJ80_09180	COG1187	pseudouridine synthase activity
LVJ80_09230	COG1652	LysM domain
LVJ80_09240	COG0312	modulator of DNA gyrase
LVJ80_09260	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LVJ80_09265	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LVJ80_09285	COG3150	esterase
LVJ80_09330	COG0121	glutamine amidotransferase
LVJ80_09415	COG0351	phosphomethylpyrimidine kinase
LVJ80_09420	COG0352	thiamine-phosphate diphosphorylase activity
LVJ80_09430	COG2239	Acts as a magnesium transporter
LVJ80_09475	COG2866	Carboxypeptidase
LVJ80_09485	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LVJ80_09565	COG1854	S-ribosylhomocysteine lyase activity
LVJ80_09570	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LVJ80_09610	COG0822	iron-sulfur transferase activity
LVJ80_09615	COG1487	ribonuclease activity
LVJ80_09640	COG0545	Peptidyl-prolyl cis-trans isomerase
LVJ80_09705	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LVJ80_09710	COG0625	glutathione transferase activity
LVJ80_09715	COG2969	positive regulation of protein catabolic process
LVJ80_09805	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ80_09815	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LVJ80_09830	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LVJ80_09890	COG4604	ABC transporter, ATP-binding protein
LVJ80_09900	COG4605	iron ion homeostasis
LVJ80_09905	COG1373	ATPase (AAA superfamily
LVJ80_09910	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LVJ80_09935	COG0303	'Molybdopterin
LVJ80_09970	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
LVJ80_09980	COG3392	D12 class N6 adenine-specific DNA methyltransferase
LVJ80_10090	COG2369	cell adhesion
LVJ80_10195	COG4396	Host-nuclease inhibitor protein Gam
LVJ80_10255	COG0488	(ABC) transporter
LVJ80_10335	COG2261	transglycosylase associated protein
LVJ80_10340	COG0793	Belongs to the peptidase S41A family
LVJ80_10345	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LVJ80_10345	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
LVJ80_10355	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LVJ80_10380	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LVJ80_10420	COG0084	hydrolase, TatD family'
LVJ80_10445	COG1304	FMN binding
LVJ80_10455	COG0488	(ABC) transporter
LVJ80_10465	COG1982	Orn Lys Arg decarboxylase major
LVJ80_10470	COG0531	amino acid
LVJ80_10475	COG0438	transferase activity, transferring glycosyl groups
LVJ80_10480	COG0463	Glycosyl transferase, family 2
LVJ80_10485	COG2354	Protein conserved in bacteria
LVJ80_10495	COG0366	Alpha amylase catalytic
LVJ80_10510	COG1028	Short-chain dehydrogenase reductase Sdr
LVJ80_10515	COG0488	(ABC) transporter
LVJ80_10520	COG1194	a g-specific adenine glycosylase
LVJ80_10535	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LVJ80_10535	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LVJ80_10545	COG0436	Aminotransferase
LVJ80_10620	COG0356	it plays a direct role in the translocation of protons across the membrane
LVJ80_10640	COG0281	malic enzyme
LVJ80_10640	COG0280	phosphate acetyltransferase
LVJ80_10655	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LVJ80_10670	COG1253	flavin adenine dinucleotide binding
LVJ80_10680	COG1126	abc transporter atp-binding protein
LVJ80_10685	COG0765	amino acid transport
LVJ80_10705	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LVJ80_10735	COG0105	UTP biosynthetic process
LVJ80_10740	COG0348	domain, Protein
LVJ80_10840	COG0440	acetolactate synthase activity
LVJ80_10860	COG5000	phosphorelay sensor kinase activity
LVJ80_10875	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LVJ80_10885	COG3245	cytochrome
LVJ80_10890	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LVJ80_10910	COG1074	ATP-dependent DNA helicase activity
LVJ80_10940	COG0579	oxidoreductase
LVJ80_10960	COG1970	mechanosensitive ion channel activity
LVJ80_11095	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LVJ80_11180	COG1560	Kdo2-lipid A biosynthetic process
LVJ80_11280	COG0802	atpase or kinase
LVJ80_11295	COG3850	Histidine kinase
LVJ80_11300	COG2197	response regulator
LVJ80_11390	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ80_11410	COG0285	dihydrofolate synthase activity
LVJ80_11440	COG0840	transmembrane signaling receptor activity
LVJ80_11450	COG0840	transmembrane signaling receptor activity
LVJ80_11480	COG2181	nitrate reductase activity
LVJ80_11485	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
LVJ80_11495	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LVJ80_11555	COG2364	Membrane
LVJ80_11565	COG0745	RESPONSE REGULATOR receiver
LVJ80_11605	COG2201	protein-glutamate methylesterase activity
LVJ80_11610	COG0643	Histidine kinase
LVJ80_11610	COG2198	Histidine kinase
LVJ80_11635	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LVJ80_11660	COG1388	LysM domain
LVJ80_11660	COG0741	lytic transglycosylase activity
LVJ80_11665	COG2226	methyltransferase
LVJ80_11680	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LVJ80_11690	COG0347	Belongs to the P(II) protein family
LVJ80_11705	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LVJ80_11715	COG1862	Preprotein translocase
LVJ80_11745	COG4682	membrane
LVJ80_11750	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LVJ80_11750	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LVJ80_11770	COG3008	intermembrane lipid transfer
LVJ80_11770	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
LVJ80_11785	COG1596	polysaccharide export
LVJ80_11800	COG2995	paraquat-inducible protein a
LVJ80_11815	COG1466	dna polymerase III delta subunit
LVJ80_11820	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
LVJ80_11840	COG0675	Transposase, IS605 OrfB family
LVJ80_11875	COG4969	Belongs to the N-Me-Phe pilin family
LVJ80_11885	COG0756	dUTP diphosphatase activity
LVJ80_11920	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LVJ80_11925	COG1496	oxidoreductase activity
LVJ80_11940	COG0271	Belongs to the BolA IbaG family
LVJ80_11945	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LVJ80_11950	COG4942	peptidase
LVJ80_12010	COG1116	anion transmembrane transporter activity
LVJ80_12020	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LVJ80_12025	COG1335	isochorismatase
LVJ80_12030	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LVJ80_12035	COG1522	sequence-specific DNA binding
LVJ80_12040	COG0471	metal ion transport
LVJ80_12055	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LVJ80_12140	COG0252	asparaginase activity
LVJ80_12180	COG3392	D12 class N6 adenine-specific DNA methyltransferase
LVJ80_12460	COG3392	D12 class N6 adenine-specific DNA methyltransferase
LVJ80_12465	COG1448	Aminotransferase
LVJ80_12500	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LVJ80_12520	COG0012	GTP binding
LVJ80_12595	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LVJ80_12605	COG0268	Binds directly to 16S ribosomal RNA
LVJ80_12635	COG0778	Nitroreductase
LVJ80_12655	COG0484	heat shock protein binding
LVJ80_12660	COG0642	Histidine kinase
LVJ80_12665	COG0745	RESPONSE REGULATOR receiver
LVJ80_12680	COG1686	Belongs to the peptidase S11 family
LVJ80_12715	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LVJ80_12735	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LVJ80_12835	COG0633	Ferredoxin
LVJ80_12865	COG4650	regulator
LVJ80_12955	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LVJ80_13075	COG1216	Glycosyl transferase, family 2
LVJ80_13080	COG1530	ribonuclease E activity
LVJ80_13105	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LVJ80_13110	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LVJ80_13140	COG2011	ABC-type metal ion transport system permease component
LVJ80_13150	COG1794	racemase activity, acting on amino acids and derivatives
LVJ80_13160	COG1464	Belongs to the NlpA lipoprotein family
LVJ80_13180	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LVJ80_13230	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LVJ80_13250	COG1561	YicC-like family, N-terminal region
LVJ80_13260	COG0339	signal peptide processing
LVJ80_13285	COG1595	DNA-templated transcription, initiation
LVJ80_13290	COG3219	Protein conserved in bacteria
LVJ80_13310	COG2259	Doxx family
LVJ80_13315	COG2010	Cytochrome c
LVJ80_13330	COG3278	Belongs to the heme-copper respiratory oxidase family
LVJ80_13385	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LVJ80_13405	COG2390	Transcriptional regulator
LVJ80_13410	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LVJ80_13430	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LVJ80_13435	COG2194	sulfuric ester hydrolase activity
LVJ80_13495	COG0024	Methionine aminopeptidase
LVJ80_13505	COG1252	NADH dehydrogenase
LVJ80_13510	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
LVJ80_13525	COG0287	Prephenate dehydrogenase
LVJ80_13530	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LVJ80_13540	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LVJ80_13635	COG0612	Peptidase, M16
LVJ80_13645	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LVJ80_13650	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LVJ80_13680	COG0191	fructose-bisphosphate aldolase activity
LVJ80_13685	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LVJ80_13710	COG0671	phosphoesterase, PA-phosphatase related
LVJ80_13845	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LVJ80_13900	COG4989	oxidoreductase activity
LVJ80_13930	COG0814	amino acid
LVJ80_13935	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LVJ80_14005	COG1530	ribonuclease E activity
LVJ80_14010	COG0564	pseudouridine synthase activity
LVJ80_14060	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LVJ80_14075	COG1280	lysine exporter protein (LysE YggA)
LVJ80_14125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LVJ80_14160	COG0730	response to heat
LVJ80_14170	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LVJ80_14180	COG2207	Transcriptional regulator
LVJ80_14185	COG0300	oxidoreductase activity
LVJ80_14190	COG1902	pentaerythritol trinitrate reductase activity
LVJ80_14195	COG0583	DNA-binding transcription factor activity
LVJ80_14215	COG1846	Transcriptional regulator
LVJ80_14220	COG1764	response to oxidative stress
LVJ80_14235	COG0583	DNA-binding transcription factor activity
LVJ80_14245	COG4456	Virulence-associated protein
LVJ80_14250	COG1073	alpha beta
LVJ80_14260	COG0583	DNA-binding transcription factor activity
LVJ80_14300	COG0789	Transcriptional regulator
LVJ80_14310	COG1309	transcriptional regulator
LVJ80_14325	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LVJ80_14330	COG1373	ATPase (AAA superfamily
LVJ80_14350	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LVJ80_14360	COG0798	PFAM Bile acid sodium symporter
LVJ80_14400	COG2895	sulfate adenylyltransferase (ATP) activity
LVJ80_14405	COG0175	sulfate reduction
LVJ80_14420	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LVJ80_14425	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
LVJ80_14430	COG3468	outer membrane autotransporter barrel domain protein
LVJ80_14430	COG3266	domain, Protein
LVJ80_14440	COG4208	sulfate ABC transporter
LVJ80_14500	COG0511	ligase activity, forming carbon-carbon bonds
LVJ80_14505	COG0439	Biotin carboxylase
LVJ80_14515	COG0643	Histidine kinase
LVJ80_14515	COG2198	Histidine kinase
LVJ80_14530	COG1268	BioY protein
LVJ80_14555	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LVJ80_14620	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LVJ80_14630	COG0678	peroxiredoxin activity
LVJ80_14630	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
LVJ80_14660	COG0714	Associated with various cellular activities
LVJ80_14790	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LVJ80_14805	COG0826	peptidase U32
LVJ80_14820	COG0393	Putative heavy-metal-binding
LVJ80_14830	COG2831	hemolysin activation secretion protein
LVJ80_14835	COG3210	domain, Protein
LVJ80_14905	COG3210	domain, Protein
LVJ80_14935	COG3210	domain, Protein
LVJ80_15000	COG1192	Involved in chromosome partitioning