locus-tag	class	description
JF568_00015	COG1187	pseudouridine synthase activity
JF568_00020	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JF568_00020	COG2813	Specifically methylates the guanine in position
JF568_00055	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
JF568_00075	COG2205	protein histidine kinase activity
JF568_00080	COG0745	RESPONSE REGULATOR receiver
JF568_00085	COG3307	-O-antigen
JF568_00115	COG2364	Membrane
JF568_00225	COG0484	heat shock protein binding
JF568_00245	COG1129	ABC transporter
JF568_00255	COG1028	Short-chain dehydrogenase reductase Sdr
JF568_00265	COG4948	Mandelate Racemase Muconate Lactonizing
JF568_00275	COG1028	Short-chain dehydrogenase reductase Sdr
JF568_00280	COG2186	Transcriptional regulator
JF568_00300	COG1476	TRANSCRIPTIONal
JF568_00310	COG1854	S-ribosylhomocysteine lyase activity
JF568_00315	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JF568_00325	COG0793	Belongs to the peptidase S41A family
JF568_00330	COG3878	Protein conserved in bacteria
JF568_00355	COG1966	Carbon starvation protein
JF568_00370	COG1074	ATP-dependent DNA helicase activity
JF568_00375	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JF568_00380	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JF568_00390	COG1970	mechanosensitive ion channel activity
JF568_00410	COG0431	NADPH-dependent FMN reductase
JF568_00415	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
JF568_00435	COG0508	dehydrogenase complex catalyzes the overall conversion of
JF568_00445	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JF568_00450	COG0714	Associated with various cellular activities
JF568_00455	COG2425	protein containing a von Willebrand factor type A (vWA) domain
JF568_00465	COG0268	Binds directly to 16S ribosomal RNA
JF568_00510	COG1760	l-serine dehydratase
JF568_00520	COG3781	membrane
JF568_00535	COG1049	propionate catabolic process, 2-methylcitrate cycle
JF568_00545	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JF568_00570	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JF568_00575	COG3030	protein affecting phage T7 exclusion by the F plasmid
JF568_00580	COG4942	peptidase
JF568_00595	COG0583	DNA-binding transcription factor activity
JF568_00605	COG1466	dna polymerase III delta subunit
JF568_00620	COG2814	Major facilitator Superfamily
JF568_00630	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JF568_00655	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JF568_00670	COG0579	oxidoreductase
JF568_00715	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JF568_00750	COG1686	Belongs to the peptidase S11 family
JF568_00770	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JF568_00770	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JF568_00775	COG0210	DNA helicase
JF568_00780	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
JF568_00780	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JF568_00785	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JF568_00830	COG0778	Nitroreductase
JF568_00840	COG0277	FAD linked oxidase domain protein
JF568_00865	COG1652	LysM domain
JF568_00870	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
JF568_00875	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JF568_00910	COG0488	(ABC) transporter
JF568_00950	COG0697	spore germination
JF568_00955	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JF568_00965	COG0444	Belongs to the ABC transporter superfamily
JF568_00970	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JF568_00975	COG0601	transmembrane transport
JF568_00980	COG0747	negative chemotaxis
JF568_00985	COG0471	metal ion transport
JF568_01000	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JF568_01005	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JF568_01010	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JF568_01015	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JF568_01050	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
JF568_01060	COG0859	PFAM glycosyl transferase family 9
JF568_01070	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JF568_01080	COG0285	dihydrofolate synthase activity
JF568_01145	COG2866	Carboxypeptidase
JF568_01165	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JF568_01170	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JF568_01190	COG0714	Associated with various cellular activities
JF568_01200	COG0772	Belongs to the SEDS family
JF568_01205	COG0768	penicillin binding
JF568_01215	COG1792	Involved in formation and maintenance of cell shape
JF568_01220	COG1077	Cell shape determining protein MreB Mrl
JF568_01265	COG2201	protein-glutamate methylesterase activity
JF568_01280	COG2095	MarC family integral membrane protein
JF568_01305	COG3161	chorismate lyase activity
JF568_01325	COG0488	(ABC) transporter
JF568_01340	COG0076	glutamate decarboxylase activity
JF568_01350	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JF568_01380	COG0436	Aminotransferase
JF568_01385	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
JF568_01390	COG1686	Belongs to the peptidase S11 family
JF568_01400	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JF568_01435	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JF568_01460	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JF568_01490	COG1196	nuclear chromosome segregation
JF568_01500	COG5000	phosphorelay sensor kinase activity
JF568_01505	COG2204	response regulator
JF568_01510	COG2259	Doxx family
JF568_01530	COG3219	Protein conserved in bacteria
JF568_01545	COG1194	a g-specific adenine glycosylase
JF568_01570	COG2350	Protein conserved in bacteria
JF568_01575	COG5007	Belongs to the BolA IbaG family
JF568_01580	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JF568_01585	COG2832	Protein of unknown function (DUF454)
JF568_01595	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JF568_01610	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JF568_01610	COG3453	Protein conserved in bacteria
JF568_01630	COG1620	l-lactate permease
JF568_01635	COG0069	glutamate synthase activity
JF568_01640	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
JF568_01655	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JF568_01750	COG0489	protein tyrosine kinase activity
JF568_01755	COG0163	prenyltransferase activity
JF568_01795	COG0756	dUTP diphosphatase activity
JF568_01840	COG2851	Citrate transporter
JF568_01850	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
JF568_01875	COG0840	transmembrane signaling receptor activity
JF568_01885	COG1546	Belongs to the CinA family
JF568_01900	COG0084	hydrolase, TatD family'
JF568_01945	COG0356	it plays a direct role in the translocation of protons across the membrane
JF568_01975	COG0348	domain, Protein
JF568_01990	COG0633	Ferredoxin
JF568_02010	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JF568_02020	COG1561	YicC-like family, N-terminal region
JF568_02035	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JF568_02045	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JF568_02055	COG0802	atpase or kinase
JF568_02070	COG0463	Glycosyl transferase, family 2
JF568_02075	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JF568_02080	COG2010	Cytochrome c
JF568_02095	COG3278	Belongs to the heme-copper respiratory oxidase family
JF568_02115	COG0560	Phosphoserine phosphatase
JF568_02135	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JF568_02140	COG1984	allophanate hydrolase subunit 2
JF568_02155	COG2161	toxin-antitoxin pair type II binding
JF568_02160	COG4115	mRNA cleavage
JF568_02175	COG1914	H( )-stimulated, divalent metal cation uptake system
JF568_02180	COG1252	NADH dehydrogenase
JF568_02200	COG1448	Aminotransferase
JF568_02220	COG3552	Protein containing von Willebrand factor type A (VWA) domain
JF568_02235	COG0714	Associated with various cellular activities
JF568_02265	COG3831	ATPase activity
JF568_02290	COG0511	ligase activity, forming carbon-carbon bonds
JF568_02295	COG0439	Biotin carboxylase
JF568_02305	COG0439	Biotin carboxylase
JF568_02330	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JF568_02330	COG0045	succinate-CoA ligase (ADP-forming) activity
JF568_02330	COG1042	CoA-binding domain protein
JF568_02335	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JF568_02365	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
JF568_02370	COG3700	Belongs to the class B bacterial acid phosphatase family
JF568_02380	COG1187	pseudouridine synthase activity
JF568_02385	COG4452	Inner membrane protein CreD
JF568_02390	COG0745	RESPONSE REGULATOR receiver
JF568_02395	COG2205	protein histidine kinase activity
JF568_02400	COG2195	Cleaves the N-terminal amino acid of tripeptides
JF568_02435	COG0012	GTP binding
JF568_02440	COG0786	glutamate:sodium symporter activity
JF568_02445	COG1115	amino acid carrier protein
JF568_02455	COG1121	(ABC) transporter
JF568_02465	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JF568_02470	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JF568_02490	COG0121	glutamine amidotransferase
JF568_02505	COG1722	exodeoxyribonuclease VII activity
JF568_02510	COG0142	geranyltranstransferase activity
JF568_02530	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JF568_02545	COG0626	cystathionine gamma-synthase activity
JF568_02565	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JF568_02580	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JF568_02595	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JF568_02620	COG0277	FAD linked oxidase domain protein
JF568_02650	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JF568_02650	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JF568_02665	COG2201	protein-glutamate methylesterase activity
JF568_02685	COG4989	oxidoreductase activity
JF568_02725	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JF568_02735	COG0287	Prephenate dehydrogenase
JF568_02740	COG0730	response to heat
JF568_02760	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JF568_02765	COG0501	Belongs to the peptidase M48B family
JF568_02785	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JF568_02790	COG1012	belongs to the aldehyde dehydrogenase family
JF568_02835	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JF568_02845	COG0492	ferredoxin-NADP+ reductase activity
JF568_02855	COG2354	Protein conserved in bacteria
JF568_02865	COG0248	Ppx GppA phosphatase
JF568_02885	COG2340	Cysteine-rich secretory protein family
JF568_02900	COG0488	(ABC) transporter
JF568_02905	COG1126	abc transporter atp-binding protein
JF568_02910	COG0765	amino acid transport
JF568_02920	COG2814	Major facilitator Superfamily
JF568_02975	COG3040	lipid binding
JF568_02985	COG4535	Mg2 and Co2 transporter CorC
JF568_03045	COG3041	Addiction module toxin RelE StbE family
JF568_03055	COG2962	Rard protein
JF568_03060	COG1522	sequence-specific DNA binding
JF568_03110	COG0259	pyridoxamine-phosphate oxidase activity
JF568_03115	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JF568_03150	COG0477	Major facilitator Superfamily
JF568_03160	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
JF568_03165	COG0697	spore germination
JF568_03170	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JF568_03195	COG0339	signal peptide processing
JF568_03200	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JF568_03205	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
JF568_03240	COG0191	fructose-bisphosphate aldolase activity
JF568_03250	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JF568_03270	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JF568_03290	COG0601	transmembrane transport
JF568_03295	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JF568_03330	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
JF568_03335	COG1708	protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
JF568_03345	COG1530	ribonuclease E activity
JF568_03360	COG2975	iron-sulfur cluster assembly
JF568_03385	COG0024	Methionine aminopeptidase
JF568_03395	COG0613	PHP domain protein
JF568_03415	COG0739	heme binding
JF568_03425	COG0494	nUDIX hydrolase
JF568_03435	COG0671	phosphoesterase, PA-phosphatase related
JF568_03515	COG2857	Cytochrome c1
JF568_03520	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JF568_03525	COG0723	plastoquinol--plastocyanin reductase activity
JF568_03555	COG2315	Protein conserved in bacteria
JF568_03575	COG0542	response to heat
JF568_03660	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JF568_03665	COG0351	phosphomethylpyrimidine kinase
JF568_03680	COG0697	spore germination
JF568_03685	COG1522	sequence-specific DNA binding
JF568_03690	COG1196	nuclear chromosome segregation
JF568_03690	COG0741	lytic transglycosylase activity
JF568_03690	COG0739	heme binding
JF568_03770	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
JF568_03775	COG0494	nUDIX hydrolase
JF568_03780	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
JF568_03780	COG3264	Mechanosensitive ion channel
JF568_03790	COG0671	phosphoesterase, PA-phosphatase related
JF568_03790	COG2453	phosphatase
JF568_03795	COG2267	carboxylic ester hydrolase activity
JF568_03845	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JF568_03910	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JF568_03955	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JF568_03990	COG3321	synthase
JF568_03990	COG0604	alcohol dehydrogenase
JF568_04040	COG1064	alcohol dehydrogenase
JF568_04055	COG0778	Nitroreductase
JF568_04060	COG1902	pentaerythritol trinitrate reductase activity
JF568_04065	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JF568_04070	COG1902	pentaerythritol trinitrate reductase activity
JF568_04080	COG2249	NAD(P)H dehydrogenase (quinone) activity
JF568_04195	COG0009	L-threonylcarbamoyladenylate synthase
JF568_04200	COG2847	Copper chaperone PCu(A)C
JF568_04250	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JF568_04260	COG1120	ATPase activity
JF568_04265	COG4774	siderophore transport
JF568_04275	COG0542	response to heat
JF568_04285	COG1278	Cold shock
JF568_04375	COG0429	hydrolase of the alpha beta-hydrolase fold
JF568_04385	COG0612	Peptidase, M16
JF568_04390	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JF568_04395	COG2056	Na+-H+ antiporter family
JF568_04405	COG2951	lytic endotransglycosylase activity
JF568_04445	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JF568_04465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JF568_04485	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JF568_04505	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JF568_04515	COG3909	cytochrome
JF568_04520	COG4221	oxidoreductase activity
JF568_04565	COG2878	Part of a membrane complex involved in electron transport
JF568_04575	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JF568_04590	COG1333	cytochrome c biogenesis protein
JF568_04600	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JF568_04630	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JF568_04650	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
JF568_04660	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JF568_04665	COG1115	amino acid carrier protein
JF568_04750	COG0839	Belongs to the complex I subunit 6 family
JF568_04795	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
JF568_04830	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JF568_04900	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JF568_04945	COG4783	chaperone-mediated protein folding
JF568_04995	COG2252	PERMEase
JF568_05060	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JF568_05110	COG0583	DNA-binding transcription factor activity
JF568_05145	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JF568_05160	COG1999	signal sequence binding
JF568_05175	COG0860	N-Acetylmuramoyl-L-alanine amidase
JF568_05195	COG0308	aminopeptidase N
JF568_05210	COG3263	regulation of cellular component size
JF568_05240	COG0583	DNA-binding transcription factor activity
JF568_05270	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
JF568_05285	COG2246	polysaccharide biosynthetic process
JF568_05290	COG0463	Glycosyl transferase, family 2
JF568_05305	COG0765	amino acid transport
JF568_05310	COG0196	riboflavin kinase activity
JF568_05345	COG0129	dihydroxy-acid dehydratase activity
JF568_05370	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JF568_05380	COG2259	Doxx family
JF568_05390	COG1733	regulation of RNA biosynthetic process
JF568_05430	COG0800	Aldolase
JF568_05445	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JF568_05470	COG1335	isochorismatase
JF568_05480	COG1215	transferase activity, transferring glycosyl groups
JF568_05480	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JF568_05490	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JF568_05495	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JF568_05510	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JF568_05530	COG1376	ErfK ybiS ycfS ynhG family protein
JF568_05535	COG1737	Transcriptional regulator
JF568_05540	COG0494	nUDIX hydrolase
JF568_05545	COG3118	belongs to the thioredoxin family
JF568_05570	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
JF568_05605	COG3842	ATPase activity
JF568_05645	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JF568_05705	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JF568_05715	COG0201	protein transport
JF568_05805	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JF568_06005	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
JF568_06010	COG0742	ribosomal rna small subunit methyltransferase
JF568_06015	COG0737	Belongs to the 5'-nucleotidase family
JF568_06065	COG0758	DNA mediated transformation
JF568_06065	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JF568_06080	COG2884	Cell division ATP-binding protein ftsE
JF568_06085	COG0142	geranyltranstransferase activity
JF568_06090	COG2707	UPF0756 membrane protein
JF568_06100	COG2226	methyltransferase
JF568_06125	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JF568_06135	COG1690	Belongs to the RtcB family
JF568_06170	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JF568_06175	COG0393	Putative heavy-metal-binding
JF568_06195	COG1132	(ABC) transporter
JF568_06210	COG0859	PFAM glycosyl transferase family 9
JF568_06215	COG2086	electron transfer activity
JF568_06255	COG3738	Protein conserved in bacteria
JF568_06260	COG1739	Uncharacterized protein family UPF0029
JF568_06265	COG1881	PFAM PEBP family protein
JF568_06295	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
JF568_06345	COG1203	CRISPR-associated helicase, Cas3
JF568_06355	COG1139	Iron-sulfur cluster binding protein
JF568_06375	COG0247	lactate metabolic process
JF568_06390	COG2070	2-Nitropropane dioxygenase
JF568_06450	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
JF568_06530	COG0729	surface antigen
JF568_06540	COG2911	Protein conserved in bacteria
JF568_06555	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JF568_06595	COG0628	permease
JF568_06605	COG0300	oxidoreductase activity
JF568_06610	COG2207	Transcriptional regulator
JF568_06660	COG0583	DNA-binding transcription factor activity
JF568_06680	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JF568_06735	COG4589	Belongs to the CDS family
JF568_06755	COG0513	Belongs to the DEAD box helicase family
JF568_06785	COG0523	cobalamin synthesis protein
JF568_06790	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
JF568_06795	COG3266	domain, Protein
JF568_06805	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
JF568_06810	COG1408	metallophosphoesterase
JF568_06870	COG1696	Membrane protein involved in D-alanine export
JF568_06900	COG1399	metal-binding, possibly nucleic acid-binding protein
JF568_06930	COG0586	Pfam SNARE associated Golgi protein
JF568_06970	COG0803	Belongs to the bacterial solute-binding protein 9 family
JF568_06995	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JF568_07000	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JF568_07005	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JF568_07035	COG0514	ATP-dependent DNA helicase (RecQ)
JF568_07050	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JF568_07060	COG0616	signal peptide processing
JF568_07060	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JF568_07075	COG0805	protein transport
JF568_07105	COG3045	CreA protein
JF568_07135	COG1643	Atp-dependent helicase
JF568_07175	COG2755	lipolytic protein G-D-S-L family
JF568_07190	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JF568_07220	COG4615	Cyclic peptide transporter
JF568_07225	COG2217	Heavy metal translocating P-type atpase
JF568_07245	COG2984	ABC transporter substrate binding protein
JF568_07260	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
JF568_07275	COG0583	DNA-binding transcription factor activity
JF568_07280	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
JF568_07370	COG1741	Belongs to the pirin family
JF568_07385	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JF568_07400	COG1902	pentaerythritol trinitrate reductase activity
JF568_07435	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
JF568_07445	COG4208	sulfate ABC transporter
JF568_07500	COG0633	Ferredoxin
JF568_07595	COG0456	acetyltransferase
JF568_07600	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JF568_07690	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
JF568_07695	COG1183	phosphatidylcholine synthase activity
JF568_07755	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
JF568_07765	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JF568_07770	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JF568_07775	COG0783	Belongs to the Dps family
JF568_07815	COG1177	transmembrane transport
JF568_07820	COG1176	ABC-type spermidine putrescine transport system, permease component I
JF568_07825	COG3842	ATPase activity
JF568_07835	COG2828	Protein conserved in bacteria
JF568_07845	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JF568_07860	COG0372	Belongs to the citrate synthase family
JF568_07930	COG0295	cytidine deaminase activity
JF568_07935	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JF568_07945	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
JF568_07955	COG0799	negative regulation of ribosome biogenesis
JF568_07960	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JF568_07965	COG0288	reversible hydration of carbon dioxide
JF568_07990	COG0582	viral genome integration into host DNA
JF568_08050	COG0210	DNA helicase
JF568_08075	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JF568_08080	COG0512	Glutamine amidotransferase of anthranilate synthase
JF568_08090	COG4683	PFAM Phage derived protein Gp49-like (DUF891)
JF568_08115	COG0463	Glycosyl transferase, family 2
JF568_08125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JF568_08165	COG1388	LysM domain
JF568_08165	COG3942	CHAP domain
JF568_08180	COG1268	BioY protein
JF568_08195	COG0058	SHG alpha-glucan phosphorylase activity
JF568_08200	COG0297	glycogen (starch) synthase activity
JF568_08210	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JF568_08235	COG0561	phosphatase activity
JF568_08265	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JF568_08275	COG0814	amino acid
JF568_08280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JF568_08290	COG3179	chitinase
JF568_08305	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
JF568_08325	COG1477	protein flavinylation
JF568_08330	COG4650	regulator
JF568_08340	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
JF568_08365	COG2824	Alkylphosphonate utilization operon protein PhnA
JF568_08475	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
JF568_08515	COG0791	NLP P60 protein
JF568_08540	COG2841	Protein conserved in bacteria
JF568_08595	COG2999	glutathione oxidoreductase activity
JF568_08600	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JF568_08620	COG1522	sequence-specific DNA binding
JF568_08625	COG1335	isochorismatase
JF568_08630	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JF568_08640	COG1116	anion transmembrane transporter activity
JF568_08645	COG0592	DNA-directed DNA polymerase activity
JF568_08670	COG1214	PFAM Peptidase M22, glycoprotease
JF568_08695	COG0826	peptidase U32
JF568_08705	COG1519	Transferase
JF568_08725	COG0824	Thioesterase
JF568_08750	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JF568_08755	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
JF568_08760	COG1127	ABC transporter
JF568_08780	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JF568_08805	COG1216	Glycosyl transferase, family 2
JF568_08805	COG1442	glycosyl transferase family 8
JF568_08825	COG0542	response to heat
JF568_08835	COG1028	Short-chain dehydrogenase reductase Sdr
JF568_08875	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JF568_08885	COG2321	neutral zinc metallopeptidase
JF568_08890	COG2261	transglycosylase associated protein
JF568_08915	COG3038	cytochrome b561
JF568_08920	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JF568_08925	COG2610	gluconate transmembrane transporter activity
JF568_08930	COG3265	gluconokinase activity
JF568_08945	COG2217	Heavy metal translocating P-type atpase
JF568_08960	COG0195	Participates in both transcription termination and antitermination
JF568_09000	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JF568_09030	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JF568_09035	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JF568_09040	COG0589	response to stress
JF568_09050	COG3945	hemerythrin HHE cation binding domain
JF568_09055	COG2833	Protein of unknown function (DUF455)
JF568_09075	COG1217	gtp-binding protein TYPA
JF568_09100	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JF568_09120	COG0307	riboflavin synthase, alpha
JF568_09145	COG0037	tRNA processing
JF568_09155	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JF568_09165	COG1765	OsmC-like protein
JF568_09170	COG0765	amino acid transport
JF568_09175	COG0765	amino acid transport
JF568_09180	COG1126	abc transporter atp-binding protein
JF568_09185	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JF568_09325	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JF568_09340	COG1505	serine-type exopeptidase activity
JF568_09350	COG0469	pyruvate kinase activity
JF568_09365	COG0583	DNA-binding transcription factor activity
JF568_09385	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
JF568_09390	COG0237	dephospho-CoA kinase activity
JF568_09410	COG3104	oligopeptide transport
JF568_09415	COG0506	proline dehydrogenase activity
JF568_09415	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
JF568_09415	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
JF568_09445	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JF568_09465	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
JF568_09470	COG0312	modulator of DNA gyrase
JF568_09500	COG3468	outer membrane autotransporter barrel domain protein
JF568_09500	COG3266	domain, Protein
JF568_09510	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JF568_09515	COG0583	DNA-binding transcription factor activity
JF568_09535	COG0531	amino acid
JF568_09545	COG1981	membrane
JF568_09550	COG2954	triphosphatase activity
JF568_09570	COG0642	Histidine kinase
JF568_09630	COG0582	viral genome integration into host DNA
JF568_09700	COG0720	synthase
JF568_09705	COG0602	queuosine metabolic process
JF568_09725	COG1215	transferase activity, transferring glycosyl groups
JF568_09820	COG1530	ribonuclease E activity
JF568_09835	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JF568_09840	COG1538	Outer membrane efflux protein
JF568_09875	COG1929	Belongs to the glycerate kinase type-1 family
JF568_09880	COG2610	gluconate transmembrane transporter activity
JF568_09900	COG2194	sulfuric ester hydrolase activity
JF568_09920	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JF568_09935	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JF568_09940	COG0483	inositol monophosphate 1-phosphatase activity
JF568_09950	COG1794	racemase activity, acting on amino acids and derivatives
JF568_09955	COG3077	Addiction module antitoxin, RelB DinJ family
JF568_09960	COG2011	ABC-type metal ion transport system permease component
JF568_09995	COG1464	Belongs to the NlpA lipoprotein family
JF568_10005	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JF568_10010	COG2831	hemolysin activation secretion protein
JF568_10025	COG0557	exoribonuclease II activity
JF568_10095	COG0733	neurotransmitter:sodium symporter activity
JF568_10105	COG0733	neurotransmitter:sodium symporter activity
JF568_10165	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JF568_10180	COG3133	Outer membrane lipoprotein
JF568_10215	COG0251	oxidation-reduction process
JF568_10245	COG4607	ABC-type enterochelin transport system periplasmic component
JF568_10250	COG4682	membrane
JF568_10260	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JF568_10270	COG4605	iron ion homeostasis
JF568_10275	COG1846	Transcriptional regulator
JF568_10280	COG4604	ABC transporter, ATP-binding protein
JF568_10310	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
JF568_10325	COG0544	peptidyl-prolyl cis-trans isomerase activity
JF568_10340	COG2211	Major facilitator Superfamily
JF568_10355	COG3306	glycosyltransferase involved in LPS biosynthesis
JF568_10360	COG1619	proteins homologs of microcin C7 resistance protein MccF
JF568_10370	COG2814	Major facilitator Superfamily
JF568_10375	COG2885	chlorophyll binding
JF568_10380	COG0471	metal ion transport
JF568_10385	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JF568_10405	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
JF568_10405	COG0517	IMP dehydrogenase activity
JF568_10410	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
JF568_10420	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
JF568_10425	COG1137	ATPase activity
JF568_10450	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JF568_10465	COG2201	protein-glutamate methylesterase activity
JF568_10475	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
JF568_10480	COG1216	Glycosyl transferase, family 2
JF568_10490	COG1442	glycosyl transferase family 8
JF568_10490	COG1216	Glycosyl transferase, family 2
JF568_10510	COG2244	polysaccharide biosynthetic process
JF568_10520	COG2089	acid synthase
JF568_10530	COG1162	GTPase activity
JF568_10535	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JF568_10545	COG1083	cytidylyl-transferase
JF568_10555	COG1192	Involved in chromosome partitioning
JF568_10565	COG1085	galactose-1-phosphate uridylyltransferase
JF568_10575	COG1129	ABC transporter
JF568_10580	COG4211	Belongs to the binding-protein-dependent transport system permease family
JF568_10590	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JF568_10595	COG2214	Heat shock protein DnaJ domain protein
JF568_10600	COG0347	Belongs to the P(II) protein family
JF568_10610	COG0497	DNA recombination
JF568_10625	COG0443	Heat shock 70 kDa protein
JF568_10630	COG0519	Catalyzes the synthesis of GMP from XMP
JF568_10640	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JF568_10670	COG1086	Polysaccharide biosynthesis protein
JF568_10730	COG2268	Band 7 protein
JF568_10735	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JF568_10750	COG2852	Protein conserved in bacteria
JF568_10785	COG1476	TRANSCRIPTIONal
JF568_10790	COG3150	esterase
JF568_10810	COG1560	Kdo2-lipid A biosynthetic process
JF568_10905	COG0741	lytic transglycosylase activity
JF568_10905	COG1388	LysM domain
JF568_10935	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
JF568_10950	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
JF568_10955	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JF568_10960	COG1053	succinate dehydrogenase
JF568_10995	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JF568_11025	COG1473	amidohydrolase
JF568_11050	COG0569	domain protein
JF568_11055	COG1307	EDD domain protein, DegV family
JF568_11070	COG0508	dehydrogenase complex catalyzes the overall conversion of
JF568_11075	COG0567	Dehydrogenase, E1 component
JF568_11080	COG1289	transmembrane transporter activity
JF568_11095	COG0737	Belongs to the 5'-nucleotidase family
JF568_11115	COG2239	Acts as a magnesium transporter
JF568_11125	COG1028	Short-chain dehydrogenase reductase Sdr
JF568_11130	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JF568_11150	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JF568_11155	COG0318	PFAM AMP-dependent synthetase and ligase
JF568_11160	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JF568_11180	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JF568_11185	COG0488	(ABC) transporter
JF568_11190	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JF568_11195	COG1388	LysM domain
JF568_11195	COG4942	peptidase
JF568_11200	COG0477	Major facilitator Superfamily
JF568_11210	COG1346	cytolysis
JF568_11225	COG2310	stress, protein
JF568_11280	COG0187	DNA topoisomerase II activity
JF568_11285	COG2431	L-lysine efflux transmembrane transporter activity
JF568_11295	COG1253	flavin adenine dinucleotide binding
JF568_11330	COG2969	positive regulation of protein catabolic process
JF568_11335	COG0625	glutathione transferase activity
JF568_11365	COG0513	Belongs to the DEAD box helicase family
JF568_11380	COG0494	nUDIX hydrolase
JF568_11385	COG0366	Alpha amylase catalytic
JF568_11395	COG0280	phosphate acetyltransferase
JF568_11395	COG0857	belongs to the CobB CobQ family
JF568_11400	COG0312	modulator of DNA gyrase
JF568_11410	COG0252	asparaginase activity
JF568_11450	COG4178	(ABC) transporter
JF568_11455	COG4774	siderophore transport
JF568_11460	COG0442	prolyl-tRNA aminoacylation
JF568_11470	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JF568_11505	COG0105	UTP biosynthetic process
JF568_11535	COG1702	phosphate starvation-inducible protein PhoH
JF568_11545	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JF568_11560	COG4969	Belongs to the N-Me-Phe pilin family
JF568_11575	COG0028	Belongs to the TPP enzyme family
JF568_11580	COG0440	acetolactate synthase activity
JF568_11595	COG0586	Pfam SNARE associated Golgi protein
JF568_11600	COG2995	paraquat-inducible protein a
JF568_11605	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
JF568_11605	COG3008	intermembrane lipid transfer
JF568_11660	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JF568_11665	COG1199	ATP-dependent helicase activity
JF568_11670	COG3977	Valine--pyruvate aminotransferase
JF568_11690	COG0708	Exodeoxyribonuclease III
JF568_11725	COG0822	iron-sulfur transferase activity
JF568_11730	COG0316	Belongs to the HesB IscA family
JF568_11735	COG0084	hydrolase, TatD family'
JF568_11740	COG1448	Aminotransferase
JF568_11760	COG1045	serine acetyltransferase