locus-tag	class	description
EQM06_00010	COG0592	DNA-directed DNA polymerase activity
EQM06_00030	COG0187	DNA topoisomerase II activity
EQM06_00035	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
EQM06_00040	COG2172	sigma factor antagonist activity
EQM06_00045	COG1191	sigma factor activity
EQM06_00050	COG0180	Tryptophanyl-tRNA synthetase
EQM06_00065	COG0671	phosphoesterase, PA-phosphatase related
EQM06_00070	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
EQM06_00085	COG0183	Belongs to the thiolase family
EQM06_00090	COG1979	alcohol dehydrogenase
EQM06_00105	COG3246	L-lysine catabolic process to acetate
EQM06_00110	COG1691	(AIR) carboxylase
EQM06_00115	COG3829	transcription factor binding
EQM06_00125	COG1250	3-hydroxyacyl-CoA dehydrogenase
EQM06_00135	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
EQM06_00140	COG1606	tRNA processing
EQM06_00155	COG0235	Class ii aldolase
EQM06_00160	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EQM06_00165	COG0360	Binds together with S18 to 16S ribosomal RNA
EQM06_00175	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
EQM06_00185	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
EQM06_00190	COG0359	binds to the 23S rRNA
EQM06_00195	COG0305	Participates in initiation and elongation during chromosome replication
EQM06_00205	COG0739	heme binding
EQM06_00220	COG1592	Rubrerythrin
EQM06_00225	COG1404	Belongs to the peptidase S8 family
EQM06_00230	COG0745	RESPONSE REGULATOR receiver
EQM06_00235	COG5002	protein histidine kinase activity
EQM06_00260	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
EQM06_00265	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
EQM06_00275	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
EQM06_00290	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
EQM06_00295	COG0251	oxidation-reduction process
EQM06_00300	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
EQM06_00310	COG0710	3-dehydroquinate dehydratase activity
EQM06_00315	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
EQM06_00320	COG0077	Prephenate dehydratase
EQM06_00320	COG1605	Chorismate mutase
EQM06_00325	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
EQM06_00330	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
EQM06_00335	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
EQM06_00340	COG0287	Prephenate dehydrogenase
EQM06_00345	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
EQM06_00350	COG5001	Diguanylate cyclase
EQM06_00350	COG3300	MHYT domain
EQM06_00365	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
EQM06_00370	COG0066	3-isopropylmalate dehydratase activity
EQM06_00375	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
EQM06_00380	COG0066	3-isopropylmalate dehydratase activity
EQM06_00385	COG0473	3-isopropylmalate dehydrogenase activity
EQM06_00390	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
EQM06_00395	COG0028	Belongs to the TPP enzyme family
EQM06_00400	COG0440	acetolactate synthase activity
EQM06_00405	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
EQM06_00410	COG0129	dihydroxy-acid dehydratase activity
EQM06_00435	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
EQM06_00440	COG2986	histidine ammonia-lyase
EQM06_00445	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
EQM06_00450	COG1228	amidohydrolase
EQM06_00470	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
EQM06_00480	COG1114	Component of the transport system for branched-chain amino acids
EQM06_00500	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
EQM06_00515	COG4591	ABC-type transport system involved in lipoprotein release permease component
EQM06_00515	COG1136	(ABC) transporter
EQM06_00520	COG1136	(ABC) transporter
EQM06_00520	COG0577	efflux transmembrane transporter activity
EQM06_00550	COG1846	Transcriptional regulator
EQM06_00555	COG0386	Belongs to the glutathione peroxidase family
EQM06_00570	COG1247	-acetyltransferase
EQM06_00585	COG2235	arginine
EQM06_00590	COG3829	transcription factor binding
EQM06_00605	COG0531	amino acid
EQM06_00615	COG3177	Filamentation induced by cAMP protein fic
EQM06_00635	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
EQM06_00665	COG1695	Transcriptional regulator
EQM06_00685	COG0446	pyridine nucleotide-disulphide oxidoreductase
EQM06_00725	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
EQM06_00735	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EQM06_00775	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
EQM06_00780	COG1802	Transcriptional regulator
EQM06_00805	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
EQM06_00810	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EQM06_00815	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
EQM06_00830	COG0793	Belongs to the peptidase S41A family
EQM06_00835	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
EQM06_00870	COG1361	Conserved repeat domain
EQM06_00895	COG3693	PFAM glycoside hydrolase, family 10
EQM06_00900	COG0728	peptidoglycan biosynthetic process
EQM06_00930	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
EQM06_00940	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
EQM06_00970	COG0438	transferase activity, transferring glycosyl groups
EQM06_00980	COG1216	Glycosyl transferase, family 2
EQM06_00980	COG1442	glycosyl transferase family 8
EQM06_00990	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
EQM06_00995	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
EQM06_01000	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
EQM06_01010	COG1215	transferase activity, transferring glycosyl groups
EQM06_01015	COG1216	Glycosyl transferase, family 2
EQM06_01035	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
EQM06_01045	COG0546	phosphoglycolate phosphatase activity
EQM06_01085	COG0166	Belongs to the GPI family
EQM06_01090	COG1250	3-hydroxyacyl-CoA dehydrogenase
EQM06_01100	COG1316	TRANSCRIPTIONal
EQM06_01105	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
EQM06_01110	COG3872	metal-dependent enzyme
EQM06_01115	COG2890	protein-(glutamine-N5) methyltransferase activity
EQM06_01120	COG2807	transmembrane transport
EQM06_01125	COG0254	rRNA binding
EQM06_01130	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
EQM06_01135	COG0009	L-threonylcarbamoyladenylate synthase
EQM06_01140	COG0698	ribose 5-phosphate isomerase
EQM06_01145	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
EQM06_01150	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
EQM06_01155	COG1136	(ABC) transporter
EQM06_01165	COG1136	(ABC) transporter
EQM06_01165	COG0577	efflux transmembrane transporter activity
EQM06_01175	COG5002	protein histidine kinase activity
EQM06_01180	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
EQM06_01180	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
EQM06_01185	COG3481	metal-dependent phosphohydrolase, HD sub domain
EQM06_01190	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
EQM06_01205	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
EQM06_01215	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EQM06_01245	COG1473	amidohydrolase
EQM06_01250	COG0531	amino acid
EQM06_01260	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
EQM06_01265	COG3706	GGDEF domain
EQM06_01275	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
EQM06_01280	COG0726	polysaccharide deacetylase
EQM06_01290	COG1803	Methylglyoxal synthase
EQM06_01325	COG1472	Belongs to the glycosyl hydrolase 3 family
EQM06_01345	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EQM06_01350	COG1971	Probably functions as a manganese efflux pump
EQM06_01360	COG1295	ribonuclease BN
EQM06_01365	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
EQM06_01375	COG3635	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
EQM06_01380	COG1686	Belongs to the peptidase S11 family
EQM06_01385	COG0322	excinuclease ABC activity
EQM06_01390	COG3906	Belongs to the UPF0473 family
EQM06_01405	COG1558	bacterial-type flagellum-dependent cell motility
EQM06_01410	COG1677	Flagellar hook-basal body complex protein FliE
EQM06_01420	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EQM06_01430	COG1157	protein secretion by the type III secretion system
EQM06_01455	COG4786	Flagellar basal body rod
EQM06_01465	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EQM06_01470	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
EQM06_01470	COG1776	CheC inhibitor of MCP methylation
EQM06_01475	COG2201	protein-glutamate methylesterase activity
EQM06_01500	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EQM06_01520	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
EQM06_01525	COG1216	Glycosyl transferase, family 2
EQM06_01530	COG0656	L-ascorbic acid biosynthetic process
EQM06_01555	COG0463	Glycosyl transferase, family 2
EQM06_01570	COG1256	bacterial-type flagellum assembly
EQM06_01570	COG4786	Flagellar basal body rod
EQM06_01570	COG1256	bacterial-type flagellum assembly
EQM06_01570	COG4786	Flagellar basal body rod
EQM06_01605	COG2201	protein-glutamate methylesterase activity
EQM06_01615	COG2198	Histidine kinase
EQM06_01615	COG0643	Histidine kinase
EQM06_01620	COG3693	PFAM glycoside hydrolase, family 10
EQM06_01625	COG1815	bacterial-type flagellum-dependent cell motility
EQM06_01630	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
EQM06_01635	COG1191	sigma factor activity
EQM06_01640	COG4786	Flagellar basal body rod
EQM06_01645	COG4786	Flagellar basal body rod
EQM06_01655	COG1776	CheC inhibitor of MCP methylation
EQM06_01665	COG3437	response regulator, receiver
EQM06_01680	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
EQM06_01695	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
EQM06_01705	COG3845	ABC transporter
EQM06_01710	COG4603	Belongs to the binding-protein-dependent transport system permease family
EQM06_01715	COG1079	Belongs to the binding-protein-dependent transport system permease family
EQM06_01725	COG0693	protein deglycase activity
EQM06_01730	COG0613	PHP domain protein
EQM06_01740	COG2155	Conserved Protein
EQM06_01755	COG0051	transcription antitermination factor activity, RNA binding
EQM06_01760	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
EQM06_01765	COG0088	Forms part of the polypeptide exit tunnel
EQM06_01770	COG0089	rRNA binding
EQM06_01775	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
EQM06_01780	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
EQM06_01785	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
EQM06_01790	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
EQM06_01795	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
EQM06_01800	COG0255	Belongs to the universal ribosomal protein uL29 family
EQM06_01805	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
EQM06_01810	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
EQM06_01815	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
EQM06_01825	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
EQM06_01830	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
EQM06_01835	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
EQM06_01840	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
EQM06_01845	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
EQM06_01850	COG1841	ribosomal large subunit assembly
EQM06_01855	COG0200	Binds to the 23S rRNA
EQM06_01860	COG0201	protein transport
EQM06_01865	COG0563	adenylate kinase activity
EQM06_01875	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
EQM06_01880	COG0257	Belongs to the bacterial ribosomal protein bL36 family
EQM06_01885	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
EQM06_01890	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
EQM06_01895	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
EQM06_01900	COG0202	RNA polymerase activity
EQM06_01905	COG0203	ribosomal protein L17
EQM06_01910	COG1122	ATPase activity
EQM06_01915	COG1122	ATPase activity
EQM06_01920	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
EQM06_01930	COG0220	tRNA (guanine-N7-)-methyltransferase activity
EQM06_01955	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
EQM06_01960	COG1288	antiporter activity
EQM06_01970	COG2878	Part of a membrane complex involved in electron transport
EQM06_01975	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
EQM06_01975	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
EQM06_01975	COG0674	pyruvate-flavodoxin oxidoreductase activity
EQM06_01975	COG1013	pyruvate-flavodoxin oxidoreductase activity
EQM06_01985	COG0493	'glutamate synthase
EQM06_01985	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
EQM06_01990	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
EQM06_02000	COG1827	regulation of RNA biosynthetic process
EQM06_02005	COG1473	amidohydrolase
EQM06_02015	COG0484	heat shock protein binding
EQM06_02025	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
EQM06_02040	COG1404	Belongs to the peptidase S8 family
EQM06_02050	COG3279	Response regulator of the LytR AlgR family
EQM06_02080	COG3025	triphosphatase activity
EQM06_02085	COG0544	peptidyl-prolyl cis-trans isomerase activity
EQM06_02090	COG0740	serine-type endopeptidase activity
EQM06_02095	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
EQM06_02100	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
EQM06_02105	COG0218	Necessary for normal cell division and for the maintenance of normal septation
EQM06_02115	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
EQM06_02120	COG4869	propanediol catabolic process
EQM06_02135	COG1361	Conserved repeat domain
EQM06_02135	COG2911	Protein conserved in bacteria
EQM06_02135	COG3266	domain, Protein
EQM06_02185	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EQM06_02190	COG2385	sporulation resulting in formation of a cellular spore
EQM06_02240	COG3829	transcription factor binding
EQM06_02240	COG3290	protein histidine kinase activity
EQM06_02245	COG2851	Citrate transporter
EQM06_02260	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
EQM06_02270	COG2199	diguanylate cyclase activity
EQM06_02270	COG2203	Gaf domain
EQM06_02280	COG1970	mechanosensitive ion channel activity
EQM06_02300	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
EQM06_02320	COG1131	(ABC) transporter
EQM06_02330	COG5002	protein histidine kinase activity
EQM06_02335	COG0745	RESPONSE REGULATOR receiver
EQM06_02340	COG0726	polysaccharide deacetylase
EQM06_02350	COG2508	Transcriptional regulator
EQM06_02365	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EQM06_02370	COG1388	LysM domain
EQM06_02370	COG3858	chitin binding
EQM06_02375	COG0511	ligase activity, forming carbon-carbon bonds
EQM06_02375	COG5016	pyruvate
EQM06_02380	COG0551	DNA topoisomerase type I activity
EQM06_02380	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
EQM06_02390	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
EQM06_02395	COG2873	o-acetylhomoserine
EQM06_02405	COG1410	methionine synthase
EQM06_02405	COG0646	methionine synthase
EQM06_02410	COG1132	(ABC) transporter
EQM06_02415	COG1132	(ABC) transporter
EQM06_02425	COG0717	Belongs to the dCTP deaminase family
EQM06_02440	COG4115	mRNA cleavage
EQM06_02480	COG3546	catalase activity
EQM06_02520	COG0708	Exodeoxyribonuclease III
EQM06_02545	COG3655	Transcriptional regulator
EQM06_02565	COG0824	Thioesterase
EQM06_02570	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
EQM06_02590	COG1309	transcriptional regulator
EQM06_02610	COG3384	dioxygenase
EQM06_02640	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
EQM06_02640	COG1918	ferrous iron import across plasma membrane
EQM06_02650	COG2094	Belongs to the DNA glycosylase MPG family
EQM06_02655	COG1028	Short-chain dehydrogenase reductase Sdr
EQM06_02660	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
EQM06_02670	COG1028	Short-chain dehydrogenase reductase Sdr
EQM06_02690	COG0531	amino acid
EQM06_02695	COG0280	phosphate acetyltransferase
EQM06_02705	COG3426	butyrate kinase activity
EQM06_02710	COG0436	Aminotransferase
EQM06_02715	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
EQM06_02720	COG1360	Flagellar Motor Protein
EQM06_02730	COG1113	amino acid transport
EQM06_02740	COG1691	(AIR) carboxylase
EQM06_02745	COG0840	transmembrane signaling receptor activity
EQM06_02775	COG2205	protein histidine kinase activity
EQM06_02780	COG0071	Belongs to the small heat shock protein (HSP20) family
EQM06_02785	COG3620	sequence-specific DNA binding
EQM06_02810	COG1116	anion transmembrane transporter activity
EQM06_02815	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EQM06_02820	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
EQM06_02830	COG0598	Magnesium transport protein CorA
EQM06_02840	COG2378	regulation of single-species biofilm formation
EQM06_02860	COG1151	hydroxylamine reductase activity
EQM06_02865	COG0840	transmembrane signaling receptor activity
EQM06_02875	COG1686	Belongs to the peptidase S11 family
EQM06_02885	COG0697	spore germination
EQM06_02895	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
EQM06_02900	COG3842	ATPase activity
EQM06_02905	COG1176	ABC-type spermidine putrescine transport system, permease component I
EQM06_02910	COG1177	transmembrane transport
EQM06_02920	COG0288	reversible hydration of carbon dioxide
EQM06_02925	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
EQM06_02930	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
EQM06_02940	COG0084	hydrolase, TatD family'
EQM06_02975	COG3858	chitin binding
EQM06_03040	COG0740	serine-type endopeptidase activity
EQM06_03045	COG4695	Portal protein
EQM06_03050	COG4626	Terminase
EQM06_03050	COG1802	Transcriptional regulator
EQM06_03135	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EQM06_03135	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EQM06_03185	COG1401	restriction endodeoxyribonuclease activity
EQM06_03245	COG0446	pyridine nucleotide-disulphide oxidoreductase
EQM06_03250	COG0798	PFAM Bile acid sodium symporter
EQM06_03265	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
EQM06_03285	COG0542	response to heat
EQM06_03325	COG3829	transcription factor binding
EQM06_03330	COG0833	amino acid
EQM06_03335	COG4187	Peptidase family M20/M25/M40
EQM06_03345	COG1141	Ferredoxin
EQM06_03360	COG3829	transcription factor binding
EQM06_03360	COG3290	protein histidine kinase activity
EQM06_03395	COG1132	(ABC) transporter
EQM06_03400	COG1132	(ABC) transporter
EQM06_03415	COG1331	Highly conserved protein containing a thioredoxin domain
EQM06_03425	COG0789	Transcriptional regulator
EQM06_03425	COG4978	Transcriptional regulator
EQM06_03450	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
EQM06_03455	COG1012	belongs to the aldehyde dehydrogenase family
EQM06_03455	COG1454	alcohol dehydrogenase
EQM06_03460	COG1882	Formate acetyltransferase
EQM06_03465	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
EQM06_03490	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
EQM06_03495	COG4656	Part of a membrane complex involved in electron transport
EQM06_03500	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
EQM06_03515	COG1012	belongs to the aldehyde dehydrogenase family
EQM06_03515	COG1454	alcohol dehydrogenase
EQM06_03520	COG4869	propanediol catabolic process
EQM06_03565	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
EQM06_03580	COG2359	stage V sporulation protein S
EQM06_03590	COG0488	(ABC) transporter
EQM06_03595	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
EQM06_03600	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
EQM06_03605	COG0494	nUDIX hydrolase
EQM06_03615	COG4974	Belongs to the 'phage' integrase family
EQM06_03620	COG0335	large ribosomal subunit rRNA binding
EQM06_03630	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
EQM06_03635	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
EQM06_03640	COG2759	Belongs to the formate--tetrahydrofolate ligase family
EQM06_03645	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
EQM06_03650	COG0113	porphobilinogen synthase activity
EQM06_03655	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
EQM06_03670	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
EQM06_03690	COG0525	valine-tRNA ligase activity
EQM06_03695	COG0285	dihydrofolate synthase activity
EQM06_03700	COG1597	lipid kinase activity
EQM06_03705	COG0482	sulfurtransferase activity
EQM06_03715	COG0726	polysaccharide deacetylase
EQM06_03725	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
EQM06_03730	COG0765	amino acid transport
EQM06_03735	COG1126	abc transporter atp-binding protein
EQM06_03745	COG1473	amidohydrolase
EQM06_03755	COG1574	metal-dependent hydrolase with the TIM-barrel fold
EQM06_03775	COG0416	fatty acid biosynthetic process
EQM06_03785	COG1196	nuclear chromosome segregation
EQM06_03790	COG0552	protein localization to endoplasmic reticulum
EQM06_03795	COG1160	GTP binding
EQM06_03800	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
EQM06_03805	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
EQM06_03815	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
EQM06_03820	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EQM06_03835	COG3426	butyrate kinase activity
EQM06_03840	COG0436	Aminotransferase
EQM06_03845	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
EQM06_03850	COG2801	Transposase and inactivated derivatives
EQM06_03860	COG0326	Molecular chaperone. Has ATPase activity
EQM06_03900	COG1757	Na H antiporter
EQM06_03905	COG2204	response regulator
EQM06_03920	COG0531	amino acid
EQM06_03925	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
EQM06_03935	COG2204	response regulator
EQM06_03940	COG0833	amino acid
EQM06_03945	COG0019	diaminopimelate decarboxylase activity
EQM06_03950	COG2367	Beta-lactamase
EQM06_03960	COG2814	Major facilitator Superfamily
EQM06_03970	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
EQM06_03975	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EQM06_03980	COG0791	NLP P60 protein
EQM06_03980	COG1388	LysM domain
EQM06_03985	COG1994	Peptidase M50
EQM06_03990	COG0542	response to heat
EQM06_04005	COG1121	(ABC) transporter
EQM06_04010	COG1108	ABC-type Mn2 Zn2 transport systems permease components
EQM06_04025	COG0513	Belongs to the DEAD box helicase family
EQM06_04030	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
EQM06_04045	COG2081	HI0933 family
EQM06_04050	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
EQM06_04055	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
EQM06_04055	COG4124	Belongs to the glycosyl hydrolase 26 family
EQM06_04070	COG2195	Cleaves the N-terminal amino acid of tripeptides
EQM06_04085	COG0426	domain, Protein
EQM06_04085	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EQM06_04095	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
EQM06_04135	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
EQM06_04140	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
EQM06_04145	COG1074	ATP-dependent DNA helicase activity
EQM06_04170	COG3693	PFAM glycoside hydrolase, family 10
EQM06_04210	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
EQM06_04215	COG0284	orotidine-5'-phosphate decarboxylase activity
EQM06_04220	COG0543	2 iron, 2 sulfur cluster binding
EQM06_04225	COG0167	dihydroorotate dehydrogenase activity
EQM06_04230	COG0697	spore germination
EQM06_04245	COG0450	alkyl hydroperoxide reductase
EQM06_04250	COG1595	DNA-templated transcription, initiation
EQM06_04260	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
EQM06_04265	COG0768	penicillin binding
EQM06_04275	COG2252	PERMEase
EQM06_04280	COG0741	lytic transglycosylase activity
EQM06_04295	COG0492	ferredoxin-NADP+ reductase activity
EQM06_04300	COG2088	sporulation resulting in formation of a cellular spore
EQM06_04305	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
EQM06_04310	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
EQM06_04315	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
EQM06_04325	COG0193	aminoacyl-tRNA hydrolase activity
EQM06_04330	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
EQM06_04335	COG2002	toxin-antitoxin pair type II binding
EQM06_04340	COG0402	S-adenosylhomocysteine deaminase activity
EQM06_04350	COG3956	TIGRFAM MazG family protein
EQM06_04355	COG0776	regulation of translation
EQM06_04360	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
EQM06_04365	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
EQM06_04375	COG2323	membrane
EQM06_04415	COG1960	acyl-CoA dehydrogenase activity
EQM06_04420	COG0426	domain, Protein
EQM06_04425	COG0488	(ABC) transporter
EQM06_04480	COG0784	Response regulator, receiver
EQM06_04480	COG5002	protein histidine kinase activity
EQM06_04480	COG2198	Histidine kinase
EQM06_04485	COG3437	response regulator, receiver
EQM06_04510	COG1285	pathogenesis
EQM06_04520	COG0137	argininosuccinate synthase activity
EQM06_04525	COG0812	UDP-N-acetylmuramate dehydrogenase activity
EQM06_04535	COG1660	Displays ATPase and GTPase activities
EQM06_04540	COG3246	L-lysine catabolic process to acetate
EQM06_04545	COG1481	regulation of sporulation
EQM06_04560	COG2848	UPF0210 protein
EQM06_04565	COG3830	Belongs to the UPF0237 family
EQM06_04595	COG1217	gtp-binding protein TYPA
EQM06_04610	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
EQM06_04620	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
EQM06_04625	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
EQM06_04635	COG1177	transmembrane transport
EQM06_04645	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
EQM06_04650	COG1397	ADP-ribosylglycohydrolase
EQM06_04655	COG0668	transmembrane transport
EQM06_04660	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
EQM06_04665	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
EQM06_04685	COG2239	Acts as a magnesium transporter
EQM06_04690	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
EQM06_04690	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
EQM06_04695	COG2337	Toxic component of a toxin-antitoxin (TA) module
EQM06_04720	COG3959	Transketolase, thiamine diphosphate binding domain
EQM06_04725	COG3958	Transketolase
EQM06_04745	COG2884	Cell division ATP-binding protein ftsE
EQM06_04750	COG2177	Part of the ABC transporter FtsEX involved in
EQM06_04755	COG0739	heme binding
EQM06_04760	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
EQM06_04760	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
EQM06_04765	COG0583	DNA-binding transcription factor activity
EQM06_04770	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
EQM06_04775	COG2011	ABC-type metal ion transport system permease component
EQM06_04785	COG1464	Belongs to the NlpA lipoprotein family
EQM06_04795	COG0697	spore germination
EQM06_04805	COG0793	Belongs to the peptidase S41A family
EQM06_04805	COG3409	Peptidoglycan-binding domain 1 protein
EQM06_04810	COG4496	protein, YerC YecD
EQM06_04825	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
EQM06_04830	COG0820	rRNA (adenine-C2-)-methyltransferase activity
EQM06_04840	COG0697	spore germination
EQM06_04845	COG0494	nUDIX hydrolase
EQM06_04850	COG2340	Cysteine-rich secretory protein family
EQM06_04855	COG1744	ABC transporter substrate-binding protein PnrA-like
EQM06_04860	COG3845	ABC transporter
EQM06_04865	COG4603	Belongs to the binding-protein-dependent transport system permease family
EQM06_04870	COG1079	Belongs to the binding-protein-dependent transport system permease family
EQM06_04885	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
EQM06_04890	COG1132	(ABC) transporter
EQM06_04895	COG0617	tRNA 3'-terminal CCA addition
EQM06_04905	COG2949	membrane
EQM06_04920	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
EQM06_04930	COG1695	Transcriptional regulator
EQM06_04940	COG0583	DNA-binding transcription factor activity
EQM06_04980	COG0564	pseudouridine synthase activity
EQM06_04985	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
EQM06_04990	COG1164	Oligoendopeptidase f
EQM06_05005	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
EQM06_05010	COG0427	acetyl-CoA hydrolase
EQM06_05015	COG1454	alcohol dehydrogenase
EQM06_05030	COG2204	response regulator
EQM06_05035	COG3949	Membrane
EQM06_05050	COG2235	arginine
EQM06_05070	COG0268	Binds directly to 16S ribosomal RNA
EQM06_05075	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
EQM06_05090	COG0481	GTPase activity
EQM06_05100	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EQM06_05140	COG0559	Belongs to the binding-protein-dependent transport system permease family
EQM06_05160	COG1420	regulation of RNA biosynthetic process
EQM06_05165	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
EQM06_05170	COG0443	Heat shock 70 kDa protein
EQM06_05175	COG0484	heat shock protein binding
EQM06_05180	COG4716	Myosin-crossreactive antigen
EQM06_05185	COG1250	3-hydroxyacyl-CoA dehydrogenase
EQM06_05190	COG0494	nUDIX hydrolase
EQM06_05195	COG1937	Protein conserved in bacteria
EQM06_05205	COG0601	transmembrane transport
EQM06_05210	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
EQM06_05215	COG0444	Belongs to the ABC transporter superfamily
EQM06_05220	COG1124	(ABC) transporter
EQM06_05225	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
EQM06_05225	COG2111	Na H antiporter
EQM06_05230	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
EQM06_05235	COG3260	NADH ubiquinone oxidoreductase 20
EQM06_05245	COG0649	NAD binding
EQM06_05265	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
EQM06_05275	COG0409	Hydrogenase expression formation protein
EQM06_05290	COG2211	Major facilitator Superfamily
EQM06_05295	COG0789	Transcriptional regulator
EQM06_05295	COG4978	Transcriptional regulator
EQM06_05305	COG1385	rRNA (uridine-N3-)-methyltransferase activity
EQM06_05310	COG2033	superoxide reductase activity
EQM06_05320	COG0726	polysaccharide deacetylase
EQM06_05325	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EQM06_05330	COG0537	adenosine 5'-monophosphoramidase activity
EQM06_05335	COG0828	Belongs to the bacterial ribosomal protein bS21 family
EQM06_05345	COG1959	2 iron, 2 sulfur cluster binding
EQM06_05365	COG1702	phosphate starvation-inducible protein PhoH
EQM06_05370	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
EQM06_05375	COG0295	cytidine deaminase activity
EQM06_05380	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
EQM06_05390	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
EQM06_05400	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EQM06_05400	COG0574	Belongs to the PEP-utilizing enzyme family
EQM06_05410	COG0740	serine-type endopeptidase activity
EQM06_05420	COG1283	sodium-dependent phosphate transmembrane transporter activity
EQM06_05425	COG0745	RESPONSE REGULATOR receiver
EQM06_05430	COG5002	protein histidine kinase activity
EQM06_05435	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
EQM06_05435	COG4651	solute:proton antiporter activity
EQM06_05440	COG4962	Type ii secretion system protein e
EQM06_05480	COG3829	transcription factor binding
EQM06_05480	COG3290	protein histidine kinase activity
EQM06_05485	COG2814	Major facilitator Superfamily
EQM06_05490	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
EQM06_05495	COG3246	L-lysine catabolic process to acetate
EQM06_05510	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
EQM06_05515	COG0539	negative regulation of cytoplasmic translation
EQM06_05515	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
EQM06_05520	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
EQM06_05525	COG0497	DNA recombination
EQM06_05530	COG1438	arginine binding
EQM06_05535	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
EQM06_05545	COG2255	four-way junction helicase activity
EQM06_05550	COG2385	sporulation resulting in formation of a cellular spore
EQM06_05555	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
EQM06_05560	COG0343	queuine tRNA-ribosyltransferase activity
EQM06_05565	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
EQM06_05570	COG2207	Transcriptional regulator
EQM06_05670	COG3436	PFAM IS66 Orf2 family protein
EQM06_05680	COG3279	Response regulator of the LytR AlgR family
EQM06_05720	COG1846	Transcriptional regulator
EQM06_05745	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
EQM06_05760	COG0531	amino acid
EQM06_05770	COG1528	Iron-storage protein
EQM06_05805	COG1132	(ABC) transporter
EQM06_05810	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EQM06_05815	COG1741	Belongs to the pirin family
EQM06_05855	COG1194	a g-specific adenine glycosylase
EQM06_05860	COG0840	transmembrane signaling receptor activity
EQM06_05865	COG0840	transmembrane signaling receptor activity
EQM06_05875	COG2855	membrane
EQM06_05880	COG0583	DNA-binding transcription factor activity
EQM06_05895	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
EQM06_05905	COG0602	queuosine metabolic process
EQM06_05910	COG0227	Belongs to the bacterial ribosomal protein bL28 family
EQM06_05925	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
EQM06_05935	COG0742	ribosomal rna small subunit methyltransferase
EQM06_05940	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
EQM06_05955	COG1323	Belongs to the UPF0348 family
EQM06_05960	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
EQM06_05965	COG0333	Belongs to the bacterial ribosomal protein bL32 family
EQM06_05970	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EQM06_05985	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EQM06_05990	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EQM06_05995	COG1546	Belongs to the CinA family
EQM06_05995	COG1058	Belongs to the CinA family
EQM06_06000	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
EQM06_06005	COG0261	This protein binds to 23S rRNA in the presence of protein L20
EQM06_06010	COG0211	Belongs to the bacterial ribosomal protein bL27 family
EQM06_06015	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
EQM06_06030	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EQM06_06040	COG1596	polysaccharide export
EQM06_06040	COG1555	photosystem II stabilization
EQM06_06050	COG0750	zinc metalloprotease
EQM06_06060	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
EQM06_06065	COG4224	UPF0291 protein
EQM06_06075	COG1104	cysteine desulfurase activity
EQM06_06110	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
EQM06_06115	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
EQM06_06120	COG1570	exodeoxyribonuclease VII activity
EQM06_06135	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
EQM06_06140	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
EQM06_06145	COG0436	Aminotransferase
EQM06_06150	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
EQM06_06155	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
EQM06_06160	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
EQM06_06170	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
EQM06_06175	COG0398	Pfam SNARE associated Golgi protein
EQM06_06185	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
EQM06_06190	COG0348	domain, Protein
EQM06_06190	COG3901	Regulator of nitric oxide reductase transcription
EQM06_06200	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
EQM06_06210	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
EQM06_06215	COG4472	Bacterial protein of unknown function (DUF965)
EQM06_06220	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
EQM06_06245	COG3854	ATPases associated with a variety of cellular activities
EQM06_06250	COG1253	flavin adenine dinucleotide binding
EQM06_06255	COG0826	peptidase U32
EQM06_06260	COG4122	O-methyltransferase activity
EQM06_06265	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
EQM06_06270	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
EQM06_06275	COG3679	Belongs to the UPF0342 family
EQM06_06280	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
EQM06_06285	COG0495	leucyl-tRNA aminoacylation
EQM06_06290	COG0799	negative regulation of ribosome biogenesis
EQM06_06295	COG1713	HD superfamily hydrolase involved in NAD metabolism
EQM06_06305	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
EQM06_06310	COG0124	histidyl-tRNA synthetase
EQM06_06315	COG0635	Involved in the biosynthesis of porphyrin-containing compound
EQM06_06320	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EQM06_06325	COG1490	D-aminoacyl-tRNA deacylase activity
EQM06_06330	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EQM06_06335	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
EQM06_06335	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
EQM06_06345	COG1862	Preprotein translocase
EQM06_06360	COG0747	negative chemotaxis
EQM06_06365	COG0237	dephospho-CoA kinase activity
EQM06_06370	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EQM06_06370	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EQM06_06380	COG1595	DNA-templated transcription, initiation
EQM06_06390	COG1253	flavin adenine dinucleotide binding
EQM06_06395	COG3191	aminopeptidase activity
EQM06_06410	COG0217	transcriptional regulatory protein
EQM06_06435	COG2384	SAM-dependent methyltransferase
EQM06_06440	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
EQM06_06445	COG0358	DNA primase activity
EQM06_06450	COG0232	Belongs to the dGTPase family. Type 2 subfamily
EQM06_06455	COG0306	phosphate transporter
EQM06_06470	COG0753	catalase activity
EQM06_06480	COG1492	cobalamin metabolic process
EQM06_06485	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
EQM06_06505	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
EQM06_06510	COG1797	cobyrinic acid a,c-diamide synthase activity
EQM06_06525	COG0756	dUTP diphosphatase activity
EQM06_06530	COG0612	Peptidase, M16
EQM06_06565	COG1373	ATPase (AAA superfamily
EQM06_06590	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
EQM06_06600	COG1132	(ABC) transporter
EQM06_06610	COG2207	Transcriptional regulator
EQM06_06620	COG1108	ABC-type Mn2 Zn2 transport systems permease components
EQM06_06625	COG1121	(ABC) transporter
EQM06_06630	COG0803	Belongs to the bacterial solute-binding protein 9 family
EQM06_06640	COG0741	lytic transglycosylase activity
EQM06_06650	COG2814	Major facilitator Superfamily
EQM06_06655	COG0006	proline dipeptidase activity
EQM06_06670	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
EQM06_06680	COG1404	Belongs to the peptidase S8 family
EQM06_06685	COG0419	ATPase involved in DNA repair
EQM06_06690	COG0420	3'-5' exonuclease activity
EQM06_06695	COG1649	PFAM Uncharacterised BCR, COG1649
EQM06_06700	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
EQM06_06730	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EQM06_06740	COG4475	Protein of unknown function (DUF436)
EQM06_06755	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
EQM06_06760	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
EQM06_06770	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
EQM06_06780	COG0813	purine-nucleoside phosphorylase activity
EQM06_06800	COG0114	fumarate hydratase activity
EQM06_06805	COG0281	malic enzyme
EQM06_06810	COG1027	Aspartate ammonia-lyase
EQM06_06815	COG0583	DNA-binding transcription factor activity
EQM06_06825	COG4608	Belongs to the ABC transporter superfamily
EQM06_06830	COG0444	Belongs to the ABC transporter superfamily
EQM06_06835	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
EQM06_06850	COG1619	proteins homologs of microcin C7 resistance protein MccF
EQM06_06865	COG0531	amino acid
EQM06_06875	COG3829	transcription factor binding
EQM06_06875	COG3290	protein histidine kinase activity
EQM06_06880	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
EQM06_06885	COG3693	PFAM glycoside hydrolase, family 10
EQM06_06895	COG2197	response regulator
EQM06_06940	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
EQM06_06945	COG1733	regulation of RNA biosynthetic process
EQM06_06950	COG1522	sequence-specific DNA binding
EQM06_06965	COG3844	kynureninase activity
EQM06_06995	COG3973	AAA domain
EQM06_07020	COG1013	pyruvate-flavodoxin oxidoreductase activity
EQM06_07025	COG0674	pyruvate-flavodoxin oxidoreductase activity
EQM06_07035	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
EQM06_07055	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
EQM06_07060	COG1489	DNA binding
EQM06_07065	COG1686	Belongs to the peptidase S11 family
EQM06_07075	COG0745	RESPONSE REGULATOR receiver
EQM06_07080	COG2205	protein histidine kinase activity
EQM06_07095	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
EQM06_07105	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
EQM06_07125	COG1024	Enoyl-CoA hydratase
EQM06_07140	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
EQM06_07160	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EQM06_07190	COG0658	competence protein
EQM06_07190	COG2333	competence protein COMEC
EQM06_07220	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EQM06_07230	COG0424	maF-like protein
EQM06_07245	COG1595	DNA-templated transcription, initiation
EQM06_07250	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
EQM06_07255	COG2086	electron transfer activity
EQM06_07260	COG1960	acyl-CoA dehydrogenase activity
EQM06_07270	COG2172	sigma factor antagonist activity
EQM06_07280	COG0301	tRNA thio-modification
EQM06_07285	COG1104	cysteine desulfurase activity
EQM06_07290	COG0534	Mate efflux family protein
EQM06_07295	COG1418	mRNA catabolic process
EQM06_07300	COG0772	Belongs to the SEDS family
EQM06_07305	COG2894	cell division
EQM06_07310	COG0768	penicillin binding
EQM06_07325	COG1077	Cell shape determining protein MreB Mrl
EQM06_07330	COG2003	Belongs to the UPF0758 family
EQM06_07350	COG1126	abc transporter atp-binding protein
EQM06_07355	COG0765	amino acid transport
EQM06_07360	COG0765	amino acid transport
EQM06_07375	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
EQM06_07380	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
EQM06_07385	COG1873	PFAM PRC-barrel domain
EQM06_07390	COG0544	peptidyl-prolyl cis-trans isomerase activity
EQM06_07395	COG1191	sigma factor activity
EQM06_07400	COG1748	Saccharopine dehydrogenase
EQM06_07405	COG0493	'glutamate synthase
EQM06_07410	COG0067	glutamate synthase
EQM06_07410	COG0070	glutamate synthase
EQM06_07410	COG0069	glutamate synthase activity
EQM06_07425	COG1191	sigma factor activity
EQM06_07440	COG0291	Belongs to the bacterial ribosomal protein bL35 family
EQM06_07445	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
EQM06_07450	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
EQM06_07455	COG0860	N-Acetylmuramoyl-L-alanine amidase
EQM06_07460	COG4509	Sortase family
EQM06_07475	COG0840	transmembrane signaling receptor activity
EQM06_07505	COG1592	Rubrerythrin
EQM06_07515	COG0833	amino acid
EQM06_07520	COG0784	Response regulator, receiver
EQM06_07525	COG5002	protein histidine kinase activity
EQM06_07530	COG1012	belongs to the aldehyde dehydrogenase family
EQM06_07535	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
EQM06_07540	COG1794	racemase activity, acting on amino acids and derivatives
EQM06_07565	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
EQM06_07565	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
EQM06_07585	COG0427	acetyl-CoA hydrolase
EQM06_07600	COG1368	sulfuric ester hydrolase activity
EQM06_07615	COG0840	transmembrane signaling receptor activity
EQM06_07620	COG0582	viral genome integration into host DNA
EQM06_07625	COG0004	ammonium transporteR
EQM06_07630	COG2197	response regulator
EQM06_07635	COG0004	ammonium transporteR
EQM06_07640	COG1185	polyribonucleotide nucleotidyltransferase activity
EQM06_07645	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
EQM06_07655	COG0196	riboflavin kinase activity
EQM06_07660	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
EQM06_07665	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
EQM06_07670	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
EQM06_07675	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
EQM06_07690	COG0195	Participates in both transcription termination and antitermination
EQM06_07695	COG0779	Required for maturation of 30S ribosomal subunits
EQM06_07705	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
EQM06_07720	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
EQM06_07725	COG0750	zinc metalloprotease
EQM06_07730	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
EQM06_07735	COG0575	Belongs to the CDS family
EQM06_07740	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
EQM06_07745	COG0233	cytoplasmic translational termination
EQM06_07750	COG0528	UMP kinase activity
EQM06_07755	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
EQM06_07760	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
EQM06_07765	COG0052	Belongs to the universal ribosomal protein uS2 family
EQM06_07785	COG1561	YicC-like family, N-terminal region
EQM06_07805	COG0564	pseudouridine synthase activity
EQM06_07810	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
EQM06_07815	COG3599	regulation of cell shape
EQM06_07825	COG1799	cell septum assembly
EQM06_07830	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
EQM06_07840	COG0336	Belongs to the RNA methyltransferase TrmD family
EQM06_07845	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
EQM06_07850	COG1837	Belongs to the UPF0109 family
EQM06_07855	COG0228	four-way junction DNA binding
EQM06_07860	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
EQM06_07865	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
EQM06_07870	COG0616	signal peptide processing
EQM06_07880	COG2502	aspartate--ammonia ligase
EQM06_07885	COG1725	Transcriptional regulator
EQM06_07890	COG1131	(ABC) transporter
EQM06_07900	COG1982	Orn Lys Arg decarboxylase major
EQM06_07905	COG2195	Cleaves the N-terminal amino acid of tripeptides
EQM06_07910	COG2081	HI0933 family
EQM06_07915	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
EQM06_07985	COG0778	Nitroreductase
EQM06_07990	COG0488	(ABC) transporter
EQM06_07995	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
EQM06_08000	COG1162	GTPase activity
EQM06_08005	COG0515	serine threonine protein kinase
EQM06_08005	COG2815	serine threonine protein kinase
EQM06_08015	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
EQM06_08015	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
EQM06_08020	COG2738	Putative neutral zinc metallopeptidase
EQM06_08025	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
EQM06_08035	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
EQM06_08040	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
EQM06_08045	COG1242	4 iron, 4 sulfur cluster binding
EQM06_08050	COG1435	thymidine kinase activity
EQM06_08190	COG1739	Uncharacterized protein family UPF0029
EQM06_08195	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
EQM06_08205	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
EQM06_08210	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
EQM06_08215	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
EQM06_08220	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
EQM06_08225	COG0758	DNA mediated transformation
EQM06_08230	COG0606	chelatase, subunit chli
EQM06_08235	COG0792	nuclease activity
EQM06_08250	COG0475	glutathione-regulated potassium exporter activity
EQM06_08250	COG0569	domain protein
EQM06_08255	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
EQM06_08260	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
EQM06_08265	COG0517	IMP dehydrogenase activity
EQM06_08270	COG0557	exoribonuclease II activity
EQM06_08280	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
EQM06_08290	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
EQM06_08295	COG0148	phosphopyruvate hydratase activity
EQM06_08300	COG0149	triose-phosphate isomerase activity
EQM06_08305	COG0126	phosphoglycerate kinase activity
EQM06_08310	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
EQM06_08325	COG0460	homoserine dehydrogenase
EQM06_08330	COG0653	protein targeting
EQM06_08335	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
EQM06_08340	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
EQM06_08345	COG0473	3-isopropylmalate dehydrogenase activity
EQM06_08350	COG1802	Transcriptional regulator
EQM06_08360	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
EQM06_08365	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
EQM06_08370	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
EQM06_08375	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
EQM06_08380	COG0131	Imidazoleglycerol-phosphate dehydratase
EQM06_08385	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
EQM06_08390	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
EQM06_08395	COG0107	imidazoleglycerol-phosphate synthase activity
EQM06_08400	COG0140	phosphoribosyl-ATP diphosphatase activity
EQM06_08400	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
EQM06_08405	COG2909	trisaccharide binding
EQM06_08410	COG0205	6-phosphofructokinase activity
EQM06_08420	COG5001	Diguanylate cyclase
EQM06_08435	COG3344	reverse transcriptase
EQM06_08445	COG1288	antiporter activity
EQM06_08460	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
EQM06_08465	COG0833	amino acid
EQM06_08470	COG5001	Diguanylate cyclase
EQM06_08470	COG5002	protein histidine kinase activity
EQM06_08480	COG0826	peptidase U32
EQM06_08485	COG0488	(ABC) transporter
EQM06_08525	COG2204	response regulator
EQM06_08530	COG3852	Histidine kinase
EQM06_08535	COG0531	amino acid
EQM06_08555	COG2252	PERMEase
EQM06_08560	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
EQM06_08565	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
EQM06_08575	COG1882	Formate acetyltransferase
EQM06_08580	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
EQM06_08585	COG3938	Belongs to the proline racemase family
EQM06_08600	COG1882	Formate acetyltransferase
EQM06_08620	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
EQM06_08640	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
EQM06_08655	COG2272	Belongs to the type-B carboxylesterase lipase family
EQM06_08660	COG0534	Mate efflux family protein
EQM06_08730	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
EQM06_08735	COG0018	arginyl-trna synthetase
EQM06_08740	COG1683	Conserved Protein
EQM06_08745	COG1193	negative regulation of DNA recombination
EQM06_08750	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
EQM06_08755	COG0072	phenylalanine-tRNA ligase activity
EQM06_08755	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EQM06_08760	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
EQM06_08765	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EQM06_08770	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
EQM06_08775	COG3856	small basic protein
EQM06_08795	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EQM06_08800	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
EQM06_08805	COG0772	Belongs to the SEDS family
EQM06_08810	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
EQM06_08815	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EQM06_08820	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
EQM06_08825	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
EQM06_08830	COG0768	penicillin binding
EQM06_08840	COG0275	rRNA processing
EQM06_08845	COG2001	Belongs to the MraZ family
EQM06_08860	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
EQM06_08865	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
EQM06_08870	COG0840	transmembrane signaling receptor activity
EQM06_08875	COG0012	GTP binding
EQM06_08880	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
EQM06_08890	COG2002	toxin-antitoxin pair type II binding
EQM06_08910	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
EQM06_08915	COG1774	PSP1 C-terminal conserved region
EQM06_08920	COG0470	DNA polymerase III
EQM06_08925	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
EQM06_08955	COG0628	permease
EQM06_08965	COG1802	Transcriptional regulator
EQM06_09005	COG3290	protein histidine kinase activity
EQM06_09010	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
EQM06_09015	COG0505	Belongs to the CarA family
EQM06_09020	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
EQM06_09025	COG0116	Belongs to the methyltransferase superfamily
EQM06_09040	COG0726	polysaccharide deacetylase
EQM06_09055	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
EQM06_09075	COG1609	Transcriptional regulator
EQM06_09080	COG2199	diguanylate cyclase activity
EQM06_09100	COG0504	CTP synthase activity
EQM06_09120	COG1045	serine acetyltransferase
EQM06_09130	COG1172	Belongs to the binding-protein-dependent transport system permease family
EQM06_09135	COG1129	ABC transporter
EQM06_09140	COG1869	D-ribose catabolic process
EQM06_09145	COG1609	Transcriptional regulator
EQM06_09160	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
EQM06_09170	COG1696	Membrane protein involved in D-alanine export
EQM06_09185	COG0531	amino acid
EQM06_09190	COG2204	response regulator
EQM06_09195	COG3852	Histidine kinase
EQM06_09210	COG2814	Major facilitator Superfamily
EQM06_09215	COG1566	PFAM secretion protein HlyD family protein
EQM06_09230	COG3853	Toxic anion resistance protein (TelA)
EQM06_09245	COG3409	Peptidoglycan-binding domain 1 protein
EQM06_09245	COG3773	Cell wall hydrolase
EQM06_09255	COG1522	sequence-specific DNA binding
EQM06_09260	COG0477	Major facilitator Superfamily
EQM06_09280	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
EQM06_09285	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
EQM06_09300	COG5012	cobalamin binding
EQM06_09320	COG5012	cobalamin binding
EQM06_09325	COG2207	Transcriptional regulator
EQM06_09325	COG1917	Cupin 2, conserved barrel domain protein
EQM06_09340	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
EQM06_09345	COG1882	Formate acetyltransferase
EQM06_09360	COG2972	Histidine kinase
EQM06_09380	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
EQM06_09410	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
EQM06_09420	COG0656	L-ascorbic acid biosynthetic process
EQM06_09430	COG0833	amino acid
EQM06_09440	COG1882	Formate acetyltransferase
EQM06_09445	COG1914	H( )-stimulated, divalent metal cation uptake system
EQM06_09455	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
EQM06_09460	COG1518	maintenance of DNA repeat elements
EQM06_09500	COG0739	heme binding
EQM06_09500	COG0741	lytic transglycosylase activity
EQM06_09500	COG1196	nuclear chromosome segregation
EQM06_09610	COG4443	Transcriptional Coactivator p15 (PC4)
EQM06_09690	COG1484	DNA-dependent DNA replication
EQM06_09695	COG3935	DnaD domain protein
EQM06_09735	COG2359	stage V sporulation protein S
EQM06_09790	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
EQM06_09795	COG0681	Belongs to the peptidase S26 family
EQM06_09820	COG0191	fructose-bisphosphate aldolase activity
EQM06_09840	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
EQM06_09850	COG0556	nucleotide-excision repair
EQM06_09855	COG0372	Belongs to the citrate synthase family
EQM06_09860	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
EQM06_09880	COG1129	ABC transporter
EQM06_09880	COG0842	Transport permease protein
EQM06_09885	COG0674	pyruvate-flavodoxin oxidoreductase activity
EQM06_09885	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
EQM06_09885	COG1013	pyruvate-flavodoxin oxidoreductase activity
EQM06_09885	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
EQM06_09900	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
EQM06_09905	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
EQM06_09910	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
EQM06_09930	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
EQM06_09935	COG0210	DNA helicase
EQM06_09940	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
EQM06_09945	COG2313	pseudouridylate synthase activity
EQM06_09950	COG0622	Phosphoesterase
EQM06_09955	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EQM06_09960	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
EQM06_09965	COG0049	tRNA binding
EQM06_09970	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
EQM06_09975	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EQM06_09980	COG0085	RNA polymerase activity
EQM06_09985	COG0222	ribosome binding
EQM06_09995	COG0081	regulation of translation
EQM06_10000	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
EQM06_10005	COG0250	Participates in transcription elongation, termination and antitermination
EQM06_10010	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
EQM06_10045	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EQM06_10070	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EQM06_10085	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
EQM06_10090	COG0215	cysteine-tRNA ligase activity
EQM06_10095	COG0739	heme binding
EQM06_10100	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
EQM06_10105	COG1051	belongs to the nudix hydrolase family
EQM06_10110	COG2860	membrane
EQM06_10115	COG0442	prolyl-tRNA aminoacylation
EQM06_10120	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
EQM06_10120	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
EQM06_10125	COG4956	integral membrane protein (PIN domain superfamily)
EQM06_10135	COG5002	protein histidine kinase activity
EQM06_10140	COG0745	RESPONSE REGULATOR receiver
EQM06_10145	COG0531	amino acid
EQM06_10150	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
EQM06_10155	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
EQM06_10160	COG0252	asparaginase activity
EQM06_10165	COG0017	Asparaginyl-tRNA synthetase
EQM06_10180	COG1309	transcriptional regulator
EQM06_10185	COG1053	succinate dehydrogenase
EQM06_10190	COG1028	Short-chain dehydrogenase reductase Sdr
EQM06_10200	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
EQM06_10210	COG1028	Short-chain dehydrogenase reductase Sdr
EQM06_10215	COG0789	Transcriptional regulator
EQM06_10220	COG3328	transposase activity
EQM06_10240	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
EQM06_10245	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
EQM06_10255	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EQM06_10260	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
EQM06_10270	COG4770	biotin carboxylase activity
EQM06_10280	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
EQM06_10290	COG2508	Transcriptional regulator
EQM06_10290	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
EQM06_10295	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
EQM06_10300	COG0037	tRNA processing
EQM06_10305	COG0488	(ABC) transporter
EQM06_10325	COG0084	hydrolase, TatD family'
EQM06_10340	COG0463	Glycosyl transferase, family 2
EQM06_10350	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EQM06_10350	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EQM06_10360	COG1268	BioY protein
EQM06_10400	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
EQM06_10420	COG0559	Belongs to the binding-protein-dependent transport system permease family
EQM06_10440	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EQM06_10450	COG0326	Molecular chaperone. Has ATPase activity
EQM06_10455	COG1757	Na H antiporter
EQM06_10460	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
EQM06_10465	COG1882	Formate acetyltransferase
EQM06_10475	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
EQM06_10480	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
EQM06_10505	COG1464	Belongs to the NlpA lipoprotein family
EQM06_10510	COG2011	ABC-type metal ion transport system permease component
EQM06_10515	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
EQM06_10520	COG0840	transmembrane signaling receptor activity
EQM06_10535	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
EQM06_10550	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
EQM06_10560	COG1937	Protein conserved in bacteria
EQM06_10595	COG0840	transmembrane signaling receptor activity
EQM06_10600	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
EQM06_10605	COG0583	DNA-binding transcription factor activity
EQM06_10630	COG3328	transposase activity
EQM06_10660	COG0516	GMP reductase activity
EQM06_10660	COG0517	IMP dehydrogenase activity
EQM06_10665	COG1876	peptidase activity
EQM06_10670	COG0840	transmembrane signaling receptor activity
EQM06_10680	COG1028	Short-chain dehydrogenase reductase Sdr
EQM06_10700	COG1733	regulation of RNA biosynthetic process
EQM06_10705	COG2233	PERMEase
EQM06_10710	COG1250	3-hydroxyacyl-CoA dehydrogenase
EQM06_10715	COG3246	L-lysine catabolic process to acetate
EQM06_10720	COG3829	transcription factor binding
EQM06_10720	COG3290	protein histidine kinase activity
EQM06_10735	COG0459	protein refolding
EQM06_10740	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
EQM06_10745	COG1811	Na channel or pump
EQM06_10765	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
EQM06_10770	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
EQM06_10775	COG0488	(ABC) transporter
EQM06_10790	COG0456	acetyltransferase
EQM06_10795	COG1214	PFAM Peptidase M22, glycoprotease
EQM06_10800	COG0802	atpase or kinase
EQM06_10805	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
EQM06_10810	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
EQM06_10820	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
EQM06_10830	COG1592	Rubrerythrin
EQM06_10830	COG1773	rubredoxin
EQM06_10835	COG5001	Diguanylate cyclase
EQM06_10835	COG3300	MHYT domain
EQM06_10840	COG0840	transmembrane signaling receptor activity
EQM06_10860	COG1136	(ABC) transporter
EQM06_10865	COG0642	Histidine kinase
EQM06_10870	COG0745	RESPONSE REGULATOR receiver
EQM06_10875	COG0697	spore germination
EQM06_10880	COG3457	Alanine racemase
EQM06_10885	COG0318	PFAM AMP-dependent synthetase and ligase
EQM06_10905	COG3706	GGDEF domain
EQM06_10940	COG2337	Toxic component of a toxin-antitoxin (TA) module
EQM06_10955	COG2217	Heavy metal translocating P-type atpase
EQM06_10960	COG2217	Heavy metal translocating P-type atpase
EQM06_10965	COG0640	Transcriptional regulator
EQM06_10990	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
EQM06_11020	COG1196	nuclear chromosome segregation
EQM06_11020	COG0739	heme binding
EQM06_11020	COG0741	lytic transglycosylase activity
EQM06_11085	COG2378	regulation of single-species biofilm formation
EQM06_11100	COG0701	Predicted permease
EQM06_11120	COG0798	PFAM Bile acid sodium symporter
EQM06_11140	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
EQM06_11145	COG0662	Cupin 2, conserved barrel domain protein
EQM06_11245	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
EQM06_11260	COG2088	sporulation resulting in formation of a cellular spore
EQM06_11315	COG4820	ethanolamine utilization protein (EutJ)
EQM06_11325	COG2261	transglycosylase associated protein
EQM06_11335	COG3192	ethanolamine utilization protein
EQM06_11345	COG4656	Part of a membrane complex involved in electron transport
EQM06_11350	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
EQM06_11360	COG4869	propanediol catabolic process
EQM06_11380	COG1454	alcohol dehydrogenase
EQM06_11380	COG1012	belongs to the aldehyde dehydrogenase family
EQM06_11390	COG4816	utilization protein
EQM06_11400	COG4303	Ethanolamine ammonia lyase large subunit
EQM06_11505	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
EQM06_11515	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
EQM06_11520	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
EQM06_11525	COG1028	Short-chain dehydrogenase reductase Sdr
EQM06_11530	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
EQM06_11540	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EQM06_11545	COG0438	transferase activity, transferring glycosyl groups
EQM06_11555	COG2183	response to ionizing radiation
EQM06_11565	COG0653	protein targeting
EQM06_11570	COG4536	flavin adenine dinucleotide binding
EQM06_11575	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
EQM06_11580	COG0527	aspartate kinase activity
EQM06_11585	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
EQM06_11605	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
EQM06_11615	COG0835	chemotaxis
EQM06_11625	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
EQM06_11630	COG2031	fatty acid transporter
EQM06_11635	COG5012	cobalamin binding
EQM06_11640	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
EQM06_11645	COG1193	negative regulation of DNA recombination
EQM06_11655	COG1509	lysine 2,3-aminomutase activity
EQM06_11660	COG0604	alcohol dehydrogenase
EQM06_11665	COG0604	alcohol dehydrogenase
EQM06_11675	COG1607	acyl-coa hydrolase
EQM06_11680	COG0165	Argininosuccinate lyase
EQM06_11695	COG2195	Cleaves the N-terminal amino acid of tripeptides
EQM06_11705	COG0445	tRNA wobble uridine modification
EQM06_11705	COG0445	tRNA wobble uridine modification
EQM06_11715	COG3693	PFAM glycoside hydrolase, family 10
EQM06_11730	COG0833	amino acid
EQM06_11735	COG4187	Peptidase family M20/M25/M40
EQM06_11745	COG3829	transcription factor binding
EQM06_11750	COG4978	Transcriptional regulator
EQM06_11750	COG0789	Transcriptional regulator
EQM06_11760	COG3437	response regulator, receiver
EQM06_11775	COG1187	pseudouridine synthase activity
EQM06_11780	COG1360	Flagellar Motor Protein
EQM06_11785	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
EQM06_11790	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
EQM06_11800	COG3850	Histidine kinase
EQM06_11800	COG5002	protein histidine kinase activity
EQM06_11820	COG2195	Cleaves the N-terminal amino acid of tripeptides
EQM06_11825	COG1297	OPT oligopeptide transporter protein
EQM06_11840	COG0151	Belongs to the GarS family
EQM06_11845	COG0138	bifunctional purine biosynthesis protein purh
EQM06_11850	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
EQM06_11855	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
EQM06_11860	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
EQM06_11865	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
EQM06_11870	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
EQM06_11875	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
EQM06_11900	COG0820	rRNA (adenine-C2-)-methyltransferase activity
EQM06_11910	COG1686	Belongs to the peptidase S11 family
EQM06_11935	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
EQM06_11940	COG1760	l-serine dehydratase
EQM06_11945	COG1760	l-serine dehydratase
EQM06_11950	COG0741	lytic transglycosylase activity
EQM06_11950	COG1196	nuclear chromosome segregation
EQM06_11950	COG0739	heme binding
EQM06_11955	COG0372	Belongs to the citrate synthase family
EQM06_11960	COG3706	GGDEF domain
EQM06_11965	COG0355	proton-transporting ATP synthase activity, rotational mechanism
EQM06_11970	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
EQM06_11975	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
EQM06_11980	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
EQM06_11985	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EQM06_11990	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
EQM06_11995	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EQM06_12000	COG0356	it plays a direct role in the translocation of protons across the membrane
EQM06_12025	COG0101	tRNA pseudouridine synthase activity
EQM06_12030	COG1534	Rna-binding protein
EQM06_12035	COG5002	protein histidine kinase activity
EQM06_12035	COG2205	protein histidine kinase activity
EQM06_12035	COG0784	Response regulator, receiver
EQM06_12045	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
EQM06_12055	COG1126	abc transporter atp-binding protein
EQM06_12060	COG0765	amino acid transport
EQM06_12065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
EQM06_12075	COG0183	Belongs to the thiolase family
EQM06_12090	COG3279	Response regulator of the LytR AlgR family
EQM06_12095	COG0840	transmembrane signaling receptor activity
EQM06_12105	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
EQM06_12110	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
EQM06_12115	COG5002	protein histidine kinase activity
EQM06_12120	COG0745	RESPONSE REGULATOR receiver
EQM06_12130	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
EQM06_12135	COG0581	inorganic phosphate transmembrane transporter activity
EQM06_12140	COG0573	inorganic phosphate transmembrane transporter activity
EQM06_12150	COG1752	Esterase of the alpha-beta hydrolase superfamily
EQM06_12155	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
EQM06_12175	COG1122	ATPase activity
EQM06_12180	COG0310	cobalt ion transport
EQM06_12195	COG1752	Esterase of the alpha-beta hydrolase superfamily
EQM06_12210	COG1115	amino acid carrier protein
EQM06_12215	COG0019	diaminopimelate decarboxylase activity
EQM06_12235	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
EQM06_12255	COG1131	(ABC) transporter
EQM06_12275	COG3706	GGDEF domain
EQM06_12305	COG2878	Part of a membrane complex involved in electron transport
EQM06_12305	COG1245	4Fe-4S binding domain
EQM06_12310	COG4657	Part of a membrane complex involved in electron transport
EQM06_12315	COG4660	Part of a membrane complex involved in electron transport
EQM06_12325	COG4658	electron transport chain
EQM06_12330	COG4656	Part of a membrane complex involved in electron transport
EQM06_12335	COG0583	DNA-binding transcription factor activity
EQM06_12345	COG0402	S-adenosylhomocysteine deaminase activity
EQM06_12350	COG1574	metal-dependent hydrolase with the TIM-barrel fold
EQM06_12355	COG1757	Na H antiporter
EQM06_12360	COG2217	Heavy metal translocating P-type atpase
EQM06_12365	COG0640	Transcriptional regulator
EQM06_12370	COG0840	transmembrane signaling receptor activity
EQM06_12375	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
EQM06_12380	COG2357	RelA SpoT domain protein
EQM06_12415	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
EQM06_12425	COG1615	UPF0182 protein
EQM06_12480	COG1522	sequence-specific DNA binding
EQM06_12495	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
EQM06_12510	COG0840	transmembrane signaling receptor activity
EQM06_12510	COG3290	protein histidine kinase activity
EQM06_12535	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
EQM06_12540	COG1773	rubredoxin
EQM06_12545	COG0426	domain, Protein
EQM06_12550	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
EQM06_12555	COG0784	Response regulator, receiver
EQM06_12555	COG0835	chemotaxis
EQM06_12560	COG2827	Endonuclease containing a URI domain
EQM06_12565	COG0840	transmembrane signaling receptor activity
EQM06_12570	COG3457	Alanine racemase
EQM06_12580	COG5012	cobalamin binding
EQM06_12590	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
EQM06_12600	COG3804	dihydrodipicolinate reductase
EQM06_12605	COG3829	transcription factor binding
EQM06_12620	COG2814	Major facilitator Superfamily
EQM06_12625	COG0583	DNA-binding transcription factor activity
EQM06_12630	COG0183	Belongs to the thiolase family
EQM06_12635	COG3246	L-lysine catabolic process to acetate
EQM06_12650	COG0326	Molecular chaperone. Has ATPase activity
EQM06_12655	COG1024	Enoyl-CoA hydratase
EQM06_12660	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
EQM06_12670	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
EQM06_12700	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EQM06_12705	COG2076	Multidrug Resistance protein
EQM06_12720	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
EQM06_12730	COG1725	Transcriptional regulator
EQM06_12740	COG0577	efflux transmembrane transporter activity
EQM06_12745	COG1136	(ABC) transporter
EQM06_12750	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EQM06_12755	COG3326	Membrane
EQM06_12760	COG1475	DNA binding
EQM06_12765	COG1192	Involved in chromosome partitioning
EQM06_12780	COG0445	tRNA wobble uridine modification
EQM06_12785	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
EQM06_12790	COG1847	R3H domain protein
EQM06_12795	COG0706	membrane insertase activity
EQM06_12800	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
EQM06_12810	COG0230	Belongs to the bacterial ribosomal protein bL34 family