locus-tag class description Amico_0001 PF11638 DnaA N-terminal domain Amico_0001 PF08299 Bacterial dnaA protein helix-turn-helix Amico_0001 PF00308 Bacterial dnaA protein Amico_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Amico_0002 PF02767 DNA polymerase III beta subunit, central domain Amico_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Amico_0003 PF02463 RecF/RecN/SMC N terminal domain Amico_0004 PF13932 GidA associated domain Amico_0004 PF01134 Glucose inhibited division protein A Amico_0008 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Amico_0008 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Amico_0010 PF01118 Semialdehyde dehydrogenase, NAD binding domain Amico_0010 PF02774 Semialdehyde dehydrogenase, dimerisation domain Amico_0011 PF00701 Dihydrodipicolinate synthetase family Amico_0012 PF05173 Dihydrodipicolinate reductase, C-terminus Amico_0012 PF01113 Dihydrodipicolinate reductase, N-terminus Amico_0013 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Amico_0013 PF14602 Hexapeptide repeat of succinyl-transferase Amico_0013 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_0014 PF00696 Amino acid kinase family Amico_0014 PF01842 ACT domain Amico_0014 PF13840 ACT domain Amico_0017 PF10609 NUBPL iron-transfer P-loop NTPase Amico_0020 PF01475 Ferric uptake regulator family Amico_0022 PF02633 Creatinine amidohydrolase Amico_0023 PF01979 Amidohydrolase family Amico_0027 PF01791 DeoC/LacD family aldolase Amico_0028 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Amico_0028 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Amico_0031 PF00270 DEAD/DEAH box helicase Amico_0031 PF00271 Helicase conserved C-terminal domain Amico_0031 PF08148 DSHCT (NUC185) domain Amico_0032 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0033 PF00005 ABC transporter Amico_0033 PF00571 CBS domain Amico_0037 PF00459 Inositol monophosphatase family Amico_0038 PF02690 Na+/Pi-cotransporter Amico_0039 PF03099 Biotin/lipoate A/B protein ligase family Amico_0039 PF08279 HTH domain Amico_0039 PF02237 Biotin protein ligase C terminal domain Amico_0041 PF00005 ABC transporter Amico_0042 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0043 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0047 PF00005 ABC transporter Amico_0048 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0051 PF03061 Thioesterase superfamily Amico_0052 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase Amico_0052 PF04101 Glycosyltransferase family 28 C-terminal domain Amico_0054 PF01032 FecCD transport family Amico_0055 PF00005 ABC transporter Amico_0058 PF00156 Phosphoribosyl transferase domain Amico_0059 PF00403 Heavy-metal-associated domain Amico_0063 PF00005 ABC transporter Amico_0066 PF01891 Cobalt uptake substrate-specific transmembrane region Amico_0068 PF02567 Phenazine biosynthesis-like protein Amico_0070 PF00005 ABC transporter Amico_0071 PF00291 Pyridoxal-phosphate dependent enzyme Amico_0073 PF00155 Aminotransferase class I and II Amico_0074 PF12801 4Fe-4S binding domain Amico_0077 PF01842 ACT domain Amico_0077 PF03315 Serine dehydratase beta chain Amico_0078 PF03313 Serine dehydratase alpha chain Amico_0080 PF03129 Anticodon binding domain Amico_0080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amico_0080 PF04073 Aminoacyl-tRNA editing domain Amico_0082 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Amico_0083 PF06196 Protein of unknown function (DUF997) Amico_0084 PF00474 Sodium:solute symporter family Amico_0085 PF09339 IclR helix-turn-helix domain Amico_0085 PF01614 Bacterial transcriptional regulator Amico_0086 PF02548 Ketopantoate hydroxymethyltransferase Amico_0087 PF08546 Ketopantoate reductase PanE/ApbA C terminal Amico_0087 PF02558 Ketopantoate reductase PanE/ApbA Amico_0088 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_0090 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_0094 PF00881 Nitroreductase family Amico_0095 PF01180 Dihydroorotate dehydrogenase Amico_0096 PF00291 Pyridoxal-phosphate dependent enzyme Amico_0097 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_0098 PF00180 Isocitrate/isopropylmalate dehydrogenase Amico_0099 PF00694 Aconitase C-terminal domain Amico_0100 PF00330 Aconitase family (aconitate hydratase) Amico_0101 PF00682 HMGL-like Amico_0101 PF08502 LeuA allosteric (dimerisation) domain Amico_0103 PF10672 S-adenosylmethionine-dependent methyltransferase Amico_0103 PF17785 PUA-like domain Amico_0105 PF10531 SLBB domain Amico_0105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amico_0105 PF13375 RnfC Barrel sandwich hybrid domain Amico_0105 PF13237 4Fe-4S dicluster domain Amico_0106 PF03116 NQR2, RnfD, RnfE family Amico_0107 PF04205 FMN-binding domain Amico_0108 PF02508 Rnf-Nqr subunit, membrane protein Amico_0109 PF02508 Rnf-Nqr subunit, membrane protein Amico_0110 PF04060 Putative Fe-S cluster Amico_0110 PF13187 4Fe-4S dicluster domain Amico_0113 PF02424 ApbE family Amico_0114 PF01235 Sodium:alanine symporter family Amico_0115 PF03699 Uncharacterised protein family (UPF0182) Amico_0116 PF01980 tRNA-methyltransferase O Amico_0116 PF18389 TrmO C-terminal domain Amico_0117 PF01042 Endoribonuclease L-PSP Amico_0118 PF03313 Serine dehydratase alpha chain Amico_0119 PF00155 Aminotransferase class I and II Amico_0120 PF08471 Class II vitamin B12-dependent ribonucleotide reductase Amico_0120 PF02867 Ribonucleotide reductase, barrel domain Amico_0122 PF09827 CRISPR associated protein Cas2 Amico_0123 PF01867 CRISPR associated protein Cas1 Amico_0123 PF01930 Domain of unknown function DUF83 Amico_0127 PF18019 HD domain Amico_0128 PF09559 Cas6 Crispr Amico_0130 PF00392 Bacterial regulatory proteins, gntR family Amico_0130 PF07729 FCD domain Amico_0131 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_0133 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_0135 PF05683 Fumarase C-terminus Amico_0136 PF10415 Fumarase C C-terminus Amico_0136 PF00206 Lyase Amico_0137 PF03949 Malic enzyme, NAD binding domain Amico_0137 PF00390 Malic enzyme, N-terminal domain Amico_0140 PF01734 Patatin-like phospholipase Amico_0143 PF03401 Tripartite tricarboxylate transporter family receptor Amico_0145 PF01970 Tripartite tricarboxylate transporter TctA family Amico_0146 PF07836 DmpG-like communication domain Amico_0146 PF00682 HMGL-like Amico_0147 PF02773 S-adenosylmethionine synthetase, C-terminal domain Amico_0147 PF02772 S-adenosylmethionine synthetase, central domain Amico_0147 PF00438 S-adenosylmethionine synthetase, N-terminal domain Amico_0150 PF01206 Sulfurtransferase TusA Amico_0150 PF00581 Rhodanese-like domain Amico_0152 PF00924 Mechanosensitive ion channel Amico_0152 PF12795 Mechanosensitive ion channel porin domain Amico_0152 PF12794 Mechanosensitive ion channel inner membrane domain 1 Amico_0153 PF01546 Peptidase family M20/M25/M40 Amico_0155 PF13458 Periplasmic binding protein Amico_0156 PF02653 Branched-chain amino acid transport system / permease component Amico_0157 PF02653 Branched-chain amino acid transport system / permease component Amico_0157 PF11862 Domain of unknown function (DUF3382) Amico_0158 PF12399 Branched-chain amino acid ATP-binding cassette transporter Amico_0158 PF00005 ABC transporter Amico_0159 PF00005 ABC transporter Amico_0160 PF00155 Aminotransferase class I and II Amico_0162 PF02082 Transcriptional regulator Amico_0163 PF00266 Aminotransferase class-V Amico_0164 PF01592 NifU-like N terminal domain Amico_0166 PF03352 Methyladenine glycosylase Amico_0167 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Amico_0167 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Amico_0169 PF01556 DnaJ C terminal domain Amico_0169 PF00226 DnaJ domain Amico_0170 PF06832 Penicillin-Binding Protein C-terminus Family Amico_0170 PF00905 Penicillin binding protein transpeptidase domain Amico_0170 PF00912 Transglycosylase Amico_0171 PF07703 Alpha-2-macroglobulin bait region domain Amico_0171 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain Amico_0171 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain Amico_0171 PF17962 Bacterial macroglobulin domain 6 Amico_0171 PF01835 MG2 domain Amico_0171 PF11974 Bacterial alpha-2-macroglobulin MG3 domain Amico_0171 PF00207 Alpha-2-macroglobulin family Amico_0171 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Amico_0172 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0172 PF07724 AAA domain (Cdc48 subfamily) Amico_0172 PF10431 C-terminal, D2-small domain, of ClpB protein Amico_0172 PF17871 AAA lid domain Amico_0172 PF02861 Clp amino terminal domain, pathogenicity island component Amico_0173 PF03577 Peptidase family C69 Amico_0174 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Amico_0174 PF17203 Single cache domain 3 Amico_0174 PF00989 PAS fold Amico_0174 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_0175 PF00072 Response regulator receiver domain Amico_0180 PF03577 Peptidase family C69 Amico_0183 PF00708 Acylphosphatase Amico_0185 PF12544 Lysine-2,3-aminomutase Amico_0185 PF04055 Radical SAM superfamily Amico_0187 PF01820 D-ala D-ala ligase N-terminus Amico_0187 PF07478 D-ala D-ala ligase C-terminus Amico_0188 PF07478 D-ala D-ala ligase C-terminus Amico_0190 PF04454 Encapsulating protein for peroxidase Amico_0193 PF01613 Flavin reductase like domain Amico_0194 PF01432 Peptidase family M3 Amico_0194 PF08439 Oligopeptidase F Amico_0195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amico_0195 PF03466 LysR substrate binding domain Amico_0196 PF01546 Peptidase family M20/M25/M40 Amico_0196 PF07687 Peptidase dimerisation domain Amico_0197 PF00464 Serine hydroxymethyltransferase Amico_0199 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_0201 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_0202 PF07969 Amidohydrolase family Amico_0203 PF01546 Peptidase family M20/M25/M40 Amico_0203 PF07687 Peptidase dimerisation domain Amico_0204 PF00696 Amino acid kinase family Amico_0205 PF07969 Amidohydrolase family Amico_0206 PF13556 PucR C-terminal helix-turn-helix domain Amico_0206 PF05651 Putative sugar diacid recognition Amico_0206 PF17853 GGDEF-like domain Amico_0210 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Amico_0210 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_0211 PF07969 Amidohydrolase family Amico_0212 PF00842 Alanine racemase, C-terminal domain Amico_0212 PF01168 Alanine racemase, N-terminal domain Amico_0214 PF07664 Ferrous iron transport protein B C terminus Amico_0214 PF17910 FeoB cytosolic helical domain Amico_0214 PF02421 Ferrous iron transport protein B Amico_0214 PF07670 Nucleoside recognition Amico_0216 PF04055 Radical SAM superfamily Amico_0219 PF02535 ZIP Zinc transporter Amico_0220 PF02659 Putative manganese efflux pump Amico_0224 PF00072 Response regulator receiver domain Amico_0224 PF00486 Transcriptional regulatory protein, C terminal Amico_0225 PF09861 Lactate racemase N-terminal domain Amico_0226 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amico_0227 PF00155 Aminotransferase class I and II Amico_0228 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Amico_0228 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Amico_0229 PF03553 Na+/H+ antiporter family Amico_0230 PF01678 Diaminopimelate epimerase Amico_0232 PF00534 Glycosyl transferases group 1 Amico_0232 PF08323 Starch synthase catalytic domain Amico_0233 PF00343 Carbohydrate phosphorylase Amico_0233 PF11897 Protein of unknown function (DUF3417) Amico_0234 PF02446 4-alpha-glucanotransferase Amico_0235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Amico_0235 PF00128 Alpha amylase, catalytic domain Amico_0235 PF02806 Alpha amylase, C-terminal all-beta domain Amico_0237 PF01472 PUA domain Amico_0237 PF00696 Amino acid kinase family Amico_0238 PF00171 Aldehyde dehydrogenase family Amico_0240 PF04474 Protein of unknown function (DUF554) Amico_0244 PF02608 ABC transporter substrate-binding protein PnrA-like Amico_0245 PF00156 Phosphoribosyl transferase domain Amico_0248 PF00534 Glycosyl transferases group 1 Amico_0249 PF00982 Glycosyltransferase family 20 Amico_0251 PF01996 F420-0:Gamma-glutamyl ligase Amico_0251 PF00881 Nitroreductase family Amico_0252 PF00521 DNA gyrase/topoisomerase IV, subunit A Amico_0252 PF03989 DNA gyrase C-terminal domain, beta-propeller Amico_0253 PF02666 Phosphatidylserine decarboxylase Amico_0254 PF01066 CDP-alcohol phosphatidyltransferase Amico_0255 PF02581 Thiamine monophosphate synthase Amico_0255 PF08543 Phosphomethylpyrimidine kinase Amico_0256 PF02110 Hydroxyethylthiazole kinase family Amico_0257 PF02581 Thiamine monophosphate synthase Amico_0259 PF09084 NMT1/THI5 like Amico_0260 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0261 PF00005 ABC transporter Amico_0262 PF09515 Thiamine transporter protein (Thia_YuaJ) Amico_0264 PF01478 Type IV leader peptidase family Amico_0264 PF06750 Bacterial Peptidase A24 N-terminal domain Amico_0267 PF01039 Carboxyl transferase domain Amico_0269 PF00364 Biotin-requiring enzyme Amico_0270 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Amico_0276 PF00654 Voltage gated chloride channel Amico_0277 PF00375 Sodium:dicarboxylate symporter family Amico_0278 PF00027 Cyclic nucleotide-binding domain Amico_0278 PF01734 Patatin-like phospholipase Amico_0279 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amico_0279 PF03129 Anticodon binding domain Amico_0279 PF09180 Prolyl-tRNA synthetase, C-terminal Amico_0280 PF02541 Ppx/GppA phosphatase family Amico_0280 PF01761 3-dehydroquinate synthase Amico_0281 PF02690 Na+/Pi-cotransporter Amico_0282 PF01895 PhoU domain Amico_0283 PF00581 Rhodanese-like domain Amico_0287 PF00742 Homoserine dehydrogenase Amico_0287 PF03447 Homoserine dehydrogenase, NAD binding domain Amico_0289 PF02811 PHP domain Amico_0290 PF01212 Beta-eliminating lyase Amico_0291 PF01523 Putative modulator of DNA gyrase Amico_0292 PF11741 AMIN domain Amico_0292 PF01520 N-acetylmuramoyl-L-alanine amidase Amico_0294 PF01138 3' exoribonuclease family, domain 1 Amico_0294 PF03725 3' exoribonuclease family, domain 2 Amico_0295 PF01725 Ham1 family Amico_0296 PF03840 Preprotein translocase SecG subunit Amico_0298 PF00572 Ribosomal protein L13 Amico_0299 PF00380 Ribosomal protein S9/S16 Amico_0300 PF01769 Divalent cation transporter Amico_0300 PF03448 MgtE intracellular N domain Amico_0300 PF00571 CBS domain Amico_0301 PF08361 MAATS-type transcriptional repressor, C-terminal region Amico_0301 PF00440 Bacterial regulatory proteins, tetR family Amico_0303 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Amico_0304 PF00873 AcrB/AcrD/AcrF family Amico_0308 PF00072 Response regulator receiver domain Amico_0308 PF00196 Bacterial regulatory proteins, luxR family Amico_0311 PF00009 Elongation factor Tu GTP binding domain Amico_0311 PF03144 Elongation factor Tu domain 2 Amico_0311 PF03143 Elongation factor Tu C-terminal domain Amico_0312 PF00471 Ribosomal protein L33 Amico_0314 PF02357 Transcription termination factor nusG Amico_0314 PF00467 KOW motif Amico_0315 PF03946 Ribosomal protein L11, N-terminal domain Amico_0315 PF00298 Ribosomal protein L11, RNA binding domain Amico_0316 PF00687 Ribosomal protein L1p/L10e family Amico_0317 PF00466 Ribosomal protein L10 Amico_0318 PF16320 Ribosomal protein L7/L12 dimerisation domain Amico_0318 PF00542 Ribosomal protein L7/L12 C-terminal domain Amico_0319 PF04493 Endonuclease V Amico_0321 PF09962 Uncharacterized conserved protein (DUF2196) Amico_0323 PF03706 Lysylphosphatidylglycerol synthase TM region Amico_0323 PF09924 Uncharacterised conserved protein (DUF2156) Amico_0327 PF00892 EamA-like transporter family Amico_0329 PF14815 NUDIX domain Amico_0329 PF00730 HhH-GPD superfamily base excision DNA repair protein Amico_0329 PF00633 Helix-hairpin-helix motif Amico_0333 PF00593 TonB dependent receptor Amico_0333 PF07715 TonB-dependent Receptor Plug Domain Amico_0335 PF01032 FecCD transport family Amico_0336 PF00005 ABC transporter Amico_0338 PF02472 Biopolymer transport protein ExbD/TolR Amico_0339 PF01618 MotA/TolQ/ExbB proton channel family Amico_0340 PF00209 Sodium:neurotransmitter symporter family Amico_0341 PF17284 Spermidine synthase tetramerisation domain Amico_0342 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Amico_0342 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Amico_0343 PF00753 Metallo-beta-lactamase superfamily Amico_0344 PF02685 Glucokinase Amico_0346 PF01209 ubiE/COQ5 methyltransferase family Amico_0347 PF00005 ABC transporter Amico_0347 PF16326 ABC transporter C-terminal domain Amico_0347 PF12848 ABC transporter Amico_0348 PF07690 Major Facilitator Superfamily Amico_0349 PF00313 'Cold-shock' DNA-binding domain Amico_0350 PF00270 DEAD/DEAH box helicase Amico_0350 PF00271 Helicase conserved C-terminal domain Amico_0351 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Amico_0352 PF00873 AcrB/AcrD/AcrF family Amico_0354 PF00892 EamA-like transporter family Amico_0355 PF05651 Putative sugar diacid recognition Amico_0355 PF17853 GGDEF-like domain Amico_0355 PF13556 PucR C-terminal helix-turn-helix domain Amico_0357 PF12683 Protein of unknown function (DUF3798) Amico_0358 PF00005 ABC transporter Amico_0362 PF01996 F420-0:Gamma-glutamyl ligase Amico_0362 PF00881 Nitroreductase family Amico_0363 PF12631 MnmE helical domain Amico_0363 PF01926 50S ribosome-binding GTPase Amico_0363 PF10396 GTP-binding protein TrmE N-terminus Amico_0364 PF00155 Aminotransferase class I and II Amico_0366 PF10145 Phage-related minor tail protein Amico_0366 PF01464 Transglycosylase SLT domain Amico_0366 PF01551 Peptidase family M23 Amico_0367 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0367 PF01434 Peptidase family M41 Amico_0367 PF17862 AAA+ lid domain Amico_0367 PF06480 FtsH Extracellular Amico_0368 PF00155 Aminotransferase class I and II Amico_0369 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Amico_0369 PF01676 Metalloenzyme superfamily Amico_0370 PF01966 HD domain Amico_0371 PF00849 RNA pseudouridylate synthase Amico_0374 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Amico_0374 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Amico_0375 PF01336 OB-fold nucleic acid binding domain Amico_0375 PF00152 tRNA synthetases class II (D, K and N) Amico_0376 PF13193 AMP-binding enzyme C-terminal domain Amico_0376 PF00501 AMP-binding enzyme Amico_0377 PF01467 Cytidylyltransferase-like Amico_0377 PF00294 pfkB family carbohydrate kinase Amico_0380 PF00155 Aminotransferase class I and II Amico_0382 PF07729 FCD domain Amico_0382 PF00392 Bacterial regulatory proteins, gntR family Amico_0383 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Amico_0384 PF04298 Putative neutral zinc metallopeptidase Amico_0386 PF01189 16S rRNA methyltransferase RsmB/F Amico_0386 PF01029 NusB family Amico_0387 PF03793 PASTA domain Amico_0387 PF00069 Protein kinase domain Amico_0388 PF00834 Ribulose-phosphate 3 epimerase family Amico_0390 PF04055 Radical SAM superfamily Amico_0390 PF00919 Uncharacterized protein family UPF0004 Amico_0390 PF18693 TRAM domain Amico_0391 PF04608 Phosphatidylglycerophosphatase A Amico_0392 PF00994 Probable molybdopterin binding domain Amico_0392 PF18146 Damage-inducible protein CinA KH domain Amico_0392 PF02464 Competence-damaged protein Amico_0393 PF02834 LigT like Phosphoesterase Amico_0394 PF00154 recA bacterial DNA recombination protein Amico_0395 PF02146 Sir2 family Amico_0396 PF00860 Permease family Amico_0397 PF13533 Biotin-lipoyl like Amico_0398 PF00873 AcrB/AcrD/AcrF family Amico_0399 PF06397 Desulfoferrodoxin, N-terminal domain Amico_0399 PF01880 Desulfoferrodoxin Amico_0400 PF00210 Ferritin-like domain Amico_0402 PF00753 Metallo-beta-lactamase superfamily Amico_0402 PF00258 Flavodoxin Amico_0405 PF11700 Vacuole effluxer Atg22 like Amico_0408 PF00072 Response regulator receiver domain Amico_0408 PF00196 Bacterial regulatory proteins, luxR family Amico_0409 PF05384 Sensor protein DegS Amico_0409 PF07730 Histidine kinase Amico_0409 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_0410 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Amico_0410 PF10996 Beta-Casp domain Amico_0410 PF00753 Metallo-beta-lactamase superfamily Amico_0412 PF00579 tRNA synthetases class I (W and Y) Amico_0412 PF01479 S4 domain Amico_0413 PF03279 Bacterial lipid A biosynthesis acyltransferase Amico_0415 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0416 PF00005 ABC transporter Amico_0418 PF00753 Metallo-beta-lactamase superfamily Amico_0418 PF16123 Hydroxyacylglutathione hydrolase C-terminus Amico_0419 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Amico_0419 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Amico_0419 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Amico_0419 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Amico_0422 PF00392 Bacterial regulatory proteins, gntR family Amico_0422 PF07729 FCD domain Amico_0423 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amico_0423 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Amico_0423 PF02824 TGS domain Amico_0423 PF03129 Anticodon binding domain Amico_0424 PF00356 Bacterial regulatory proteins, lacI family Amico_0426 PF10609 NUBPL iron-transfer P-loop NTPase Amico_0427 PF00753 Metallo-beta-lactamase superfamily Amico_0427 PF16123 Hydroxyacylglutathione hydrolase C-terminus Amico_0429 PF06071 Protein of unknown function (DUF933) Amico_0429 PF01926 50S ribosome-binding GTPase Amico_0433 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_0433 PF00512 His Kinase A (phospho-acceptor) domain Amico_0434 PF01226 Formate/nitrite transporter Amico_0436 PF12002 MgsA AAA+ ATPase C terminal Amico_0436 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0436 PF16193 AAA C-terminal domain Amico_0437 PF00392 Bacterial regulatory proteins, gntR family Amico_0437 PF07729 FCD domain Amico_0438 PF01923 Cobalamin adenosyltransferase Amico_0439 PF01614 Bacterial transcriptional regulator Amico_0439 PF09339 IclR helix-turn-helix domain Amico_0441 PF03737 Aldolase/RraA Amico_0443 PF16868 NMT1-like family Amico_0446 PF03328 HpcH/HpaI aldolase/citrate lyase family Amico_0447 PF04223 Citrate lyase, alpha subunit (CitF) Amico_0449 PF02384 N-6 DNA Methylase Amico_0450 PF01420 Type I restriction modification DNA specificity domain Amico_0451 PF11867 Domain of unknown function (DUF3387) Amico_0451 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Amico_0451 PF18766 SWI2/SNF2 ATPase Amico_0454 PF00795 Carbon-nitrogen hydrolase Amico_0455 PF00392 Bacterial regulatory proteins, gntR family Amico_0457 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_0459 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_0461 PF01053 Cys/Met metabolism PLP-dependent enzyme Amico_0462 PF00690 Cation transporter/ATPase, N-terminus Amico_0462 PF00689 Cation transporting ATPase, C-terminus Amico_0463 PF01569 PAP2 superfamily Amico_0464 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_0464 PF00005 ABC transporter Amico_0465 PF00005 ABC transporter Amico_0465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_0466 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0467 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0468 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amico_0472 PF01641 SelR domain Amico_0473 PF00106 short chain dehydrogenase Amico_0477 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Amico_0477 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Amico_0478 PF05552 Conserved TM helix Amico_0478 PF00924 Mechanosensitive ion channel Amico_0488 PF00005 ABC transporter Amico_0489 PF12704 MacB-like periplasmic core domain Amico_0489 PF02687 FtsX-like permease family Amico_0489 PF00005 ABC transporter Amico_0491 PF00742 Homoserine dehydrogenase Amico_0491 PF03447 Homoserine dehydrogenase, NAD binding domain Amico_0491 PF01842 ACT domain Amico_0494 PF00313 'Cold-shock' DNA-binding domain Amico_0496 PF02682 Carboxyltransferase domain, subdomain C and D Amico_0497 PF02626 Carboxyltransferase domain, subdomain A and B Amico_0498 PF03746 LamB/YcsF family Amico_0499 PF07286 Protein of unknown function (DUF1445) Amico_0500 PF00596 Class II Aldolase and Adducin N-terminal domain Amico_0511 PF00392 Bacterial regulatory proteins, gntR family Amico_0511 PF07729 FCD domain Amico_0515 PF00549 CoA-ligase Amico_0515 PF08442 ATP-grasp domain Amico_0516 PF00549 CoA-ligase Amico_0516 PF02629 CoA binding domain Amico_0519 PF00742 Homoserine dehydrogenase Amico_0519 PF01842 ACT domain Amico_0519 PF03447 Homoserine dehydrogenase, NAD binding domain Amico_0523 PF01042 Endoribonuclease L-PSP Amico_0524 PF03601 Conserved hypothetical protein 698 Amico_0525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amico_0525 PF03466 LysR substrate binding domain Amico_0526 PF00291 Pyridoxal-phosphate dependent enzyme Amico_0528 PF00501 AMP-binding enzyme Amico_0528 PF14535 AMP-binding enzyme C-terminal domain Amico_0530 PF01938 TRAM domain Amico_0530 PF05958 tRNA (Uracil-5-)-methyltransferase Amico_0532 PF01966 HD domain Amico_0534 PF00072 Response regulator receiver domain Amico_0534 PF01966 HD domain Amico_0535 PF17674 HHH domain Amico_0535 PF00575 S1 RNA binding domain Amico_0535 PF16921 Tex protein YqgF-like domain Amico_0535 PF09371 Tex-like protein N-terminal domain Amico_0537 PF04232 Stage V sporulation protein S (SpoVS) Amico_0538 PF13393 Histidyl-tRNA synthetase Amico_0538 PF03129 Anticodon binding domain Amico_0539 PF00152 tRNA synthetases class II (D, K and N) Amico_0539 PF01336 OB-fold nucleic acid binding domain Amico_0539 PF02938 GAD domain Amico_0540 PF12706 Beta-lactamase superfamily domain Amico_0544 PF03466 LysR substrate binding domain Amico_0544 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amico_0545 PF03129 Anticodon binding domain Amico_0545 PF04073 Aminoacyl-tRNA editing domain Amico_0545 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amico_0548 PF00710 Asparaginase, N-terminal Amico_0548 PF17763 Glutaminase/Asparaginase C-terminal domain Amico_0550 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Amico_0551 PF00448 SRP54-type protein, GTPase domain Amico_0551 PF02978 Signal peptide binding domain Amico_0551 PF02881 SRP54-type protein, helical bundle domain Amico_0552 PF00886 Ribosomal protein S16 Amico_0554 PF01782 RimM N-terminal domain Amico_0554 PF05239 PRC-barrel domain Amico_0555 PF01746 tRNA (Guanine-1)-methyltransferase Amico_0555 PF09936 SAM-dependent RNA methyltransferase Amico_0556 PF01245 Ribosomal protein L19 Amico_0558 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Amico_0558 PF01676 Metalloenzyme superfamily Amico_0560 PF13607 Succinyl-CoA ligase like flavodoxin domain Amico_0560 PF13380 CoA binding domain Amico_0560 PF00583 Acetyltransferase (GNAT) family Amico_0561 PF02660 Glycerol-3-phosphate acyltransferase Amico_0562 PF17727 CtsR C-terminal dimerization domain Amico_0562 PF05848 CtsR N-terminal HTH domain Amico_0563 PF02861 Clp amino terminal domain, pathogenicity island component Amico_0563 PF10431 C-terminal, D2-small domain, of ClpB protein Amico_0563 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0563 PF17871 AAA lid domain Amico_0563 PF07724 AAA domain (Cdc48 subfamily) Amico_0568 PF02675 S-adenosylmethionine decarboxylase Amico_0570 PF00209 Sodium:neurotransmitter symporter family Amico_0572 PF00291 Pyridoxal-phosphate dependent enzyme Amico_0573 PF08544 GHMP kinases C terminal Amico_0573 PF00288 GHMP kinases N terminal domain Amico_0576 PF00005 ABC transporter Amico_0578 PF03023 Lipid II flippase MurJ Amico_0581 PF00166 Chaperonin 10 Kd subunit Amico_0582 PF00118 TCP-1/cpn60 chaperonin family Amico_0583 PF00117 Glutamine amidotransferase class-I Amico_0583 PF02540 NAD synthase Amico_0583 PF00958 GMP synthase C terminal domain Amico_0584 PF01594 AI-2E family transporter Amico_0586 PF03030 Inorganic H+ pyrophosphatase Amico_0587 PF10410 DnaB-helicase binding domain of primase Amico_0587 PF08275 DNA primase catalytic core, N-terminal domain Amico_0587 PF01807 CHC2 zinc finger Amico_0588 PF01479 S4 domain Amico_0589 PF00113 Enolase, C-terminal TIM barrel domain Amico_0589 PF03952 Enolase, N-terminal domain Amico_0590 PF06971 Putative DNA-binding protein N-terminus Amico_0590 PF02629 CoA binding domain Amico_0591 PF02699 Preprotein translocase subunit Amico_0592 PF07549 SecD/SecF GG Motif Amico_0592 PF02355 Protein export membrane protein Amico_0593 PF02355 Protein export membrane protein Amico_0593 PF07549 SecD/SecF GG Motif Amico_0594 PF04055 Radical SAM superfamily Amico_0594 PF13186 Iron-sulfur cluster-binding domain Amico_0596 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Amico_0596 PF01368 DHH family Amico_0596 PF02272 DHHA1 domain Amico_0596 PF17768 RecJ OB domain Amico_0597 PF13291 ACT domain Amico_0597 PF04607 Region found in RelA / SpoT proteins Amico_0597 PF02824 TGS domain Amico_0599 PF00753 Metallo-beta-lactamase superfamily Amico_0600 PF04002 RadC-like JAB domain Amico_0604 PF03717 Penicillin-binding Protein dimerisation domain Amico_0604 PF00905 Penicillin binding protein transpeptidase domain Amico_0605 PF03775 Septum formation inhibitor MinC, C-terminal domain Amico_0606 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amico_0607 PF03776 Septum formation topological specificity factor MinE Amico_0608 PF01098 Cell cycle protein Amico_0611 PF00575 S1 RNA binding domain Amico_0611 PF10150 Ribonuclease E/G family Amico_0612 PF02463 RecF/RecN/SMC N terminal domain Amico_0612 PF06470 SMC proteins Flexible Hinge Domain Amico_0613 PF05175 Methyltransferase small domain Amico_0614 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Amico_0615 PF09334 tRNA synthetases class I (M) Amico_0615 PF01588 Putative tRNA binding domain Amico_0615 PF08264 Anticodon-binding domain of tRNA Amico_0616 PF01026 TatD related DNase Amico_0617 PF01702 Queuine tRNA-ribosyltransferase Amico_0618 PF03481 Putative GTP-binding controlling metal-binding Amico_0618 PF01300 Telomere recombination Amico_0619 PF10385 RNA polymerase beta subunit external 1 domain Amico_0619 PF04565 RNA polymerase Rpb2, domain 3 Amico_0619 PF04561 RNA polymerase Rpb2, domain 2 Amico_0619 PF04563 RNA polymerase beta subunit Amico_0619 PF04560 RNA polymerase Rpb2, domain 7 Amico_0619 PF00562 RNA polymerase Rpb2, domain 6 Amico_0620 PF05000 RNA polymerase Rpb1, domain 4 Amico_0620 PF04997 RNA polymerase Rpb1, domain 1 Amico_0620 PF00623 RNA polymerase Rpb1, domain 2 Amico_0620 PF04998 RNA polymerase Rpb1, domain 5 Amico_0620 PF04983 RNA polymerase Rpb1, domain 3 Amico_0622 PF00164 Ribosomal protein S12/S23 Amico_0623 PF00177 Ribosomal protein S7p/S5e Amico_0624 PF00679 Elongation factor G C-terminus Amico_0624 PF14492 Elongation Factor G, domain II Amico_0624 PF03764 Elongation factor G, domain IV Amico_0624 PF00009 Elongation factor Tu GTP binding domain Amico_0624 PF03144 Elongation factor Tu domain 2 Amico_0625 PF03143 Elongation factor Tu C-terminal domain Amico_0625 PF00009 Elongation factor Tu GTP binding domain Amico_0625 PF03144 Elongation factor Tu domain 2 Amico_0626 PF00338 Ribosomal protein S10p/S20e Amico_0627 PF00297 Ribosomal protein L3 Amico_0628 PF00573 Ribosomal protein L4/L1 family Amico_0629 PF00276 Ribosomal protein L23 Amico_0630 PF00181 Ribosomal Proteins L2, RNA binding domain Amico_0630 PF03947 Ribosomal Proteins L2, C-terminal domain Amico_0631 PF00203 Ribosomal protein S19 Amico_0632 PF00237 Ribosomal protein L22p/L17e Amico_0633 PF00189 Ribosomal protein S3, C-terminal domain Amico_0633 PF07650 KH domain Amico_0634 PF00252 Ribosomal protein L16p/L10e Amico_0635 PF00831 Ribosomal L29 protein Amico_0636 PF00366 Ribosomal protein S17 Amico_0637 PF00238 Ribosomal protein L14p/L23e Amico_0638 PF00467 KOW motif Amico_0638 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Amico_0639 PF00281 Ribosomal protein L5 Amico_0639 PF00673 ribosomal L5P family C-terminus Amico_0640 PF00253 Ribosomal protein S14p/S29e Amico_0641 PF00410 Ribosomal protein S8 Amico_0642 PF00347 Ribosomal protein L6 Amico_0643 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Amico_0644 PF00333 Ribosomal protein S5, N-terminal domain Amico_0644 PF03719 Ribosomal protein S5, C-terminal domain Amico_0645 PF00327 Ribosomal protein L30p/L7e Amico_0646 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Amico_0647 PF00344 SecY translocase Amico_0648 PF05191 Adenylate kinase, active site lid Amico_0649 PF00557 Metallopeptidase family M24 Amico_0651 PF01176 Translation initiation factor 1A / IF-1 Amico_0652 PF00444 Ribosomal protein L36 Amico_0653 PF00416 Ribosomal protein S13/S18 Amico_0654 PF00411 Ribosomal protein S11 Amico_0655 PF01479 S4 domain Amico_0655 PF00163 Ribosomal protein S4/S9 N-terminal domain Amico_0656 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Amico_0656 PF01000 RNA polymerase Rpb3/RpoA insert domain Amico_0656 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Amico_0657 PF01196 Ribosomal protein L17 Amico_0658 PF00005 ABC transporter Amico_0659 PF00005 ABC transporter Amico_0660 PF02361 Cobalt transport protein Amico_0661 PF01416 tRNA pseudouridine synthase Amico_0667 PF00583 Acetyltransferase (GNAT) family Amico_0674 PF04060 Putative Fe-S cluster Amico_0677 PF01502 Phosphoribosyl-AMP cyclohydrolase Amico_0677 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Amico_0678 PF00977 Histidine biosynthesis protein Amico_0679 PF00977 Histidine biosynthesis protein Amico_0680 PF00117 Glutamine amidotransferase class-I Amico_0681 PF00475 Imidazoleglycerol-phosphate dehydratase Amico_0682 PF01634 ATP phosphoribosyltransferase Amico_0683 PF03129 Anticodon binding domain Amico_0683 PF13393 Histidyl-tRNA synthetase Amico_0684 PF00815 Histidinol dehydrogenase Amico_0685 PF18073 Rubredoxin metal binding domain Amico_0687 PF16200 C-terminal region of band_7 Amico_0687 PF01145 SPFH domain / Band 7 family Amico_0690 PF01649 Ribosomal protein S20 Amico_0691 PF04851 Type III restriction enzyme, res subunit Amico_0691 PF13307 Helicase C-terminal domain Amico_0692 PF00825 Ribonuclease P Amico_0693 PF01809 Putative membrane protein insertion efficiency factor Amico_0694 PF02096 60Kd inner membrane protein Amico_0694 PF14849 YidC periplasmic domain Amico_0695 PF14804 Jag N-terminus Amico_0695 PF01424 R3H domain Amico_0697 PF13180 PDZ domain Amico_0697 PF17820 PDZ domain Amico_0698 PF00512 His Kinase A (phospho-acceptor) domain Amico_0698 PF00672 HAMP domain Amico_0698 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_0699 PF00072 Response regulator receiver domain Amico_0699 PF00486 Transcriptional regulatory protein, C terminal Amico_0700 PF00312 Ribosomal protein S15 Amico_0701 PF00575 S1 RNA binding domain Amico_0701 PF03725 3' exoribonuclease family, domain 2 Amico_0701 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Amico_0701 PF00013 KH domain Amico_0701 PF01138 3' exoribonuclease family, domain 1 Amico_0702 PF00692 dUTPase Amico_0703 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Amico_0703 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amico_0703 PF02824 TGS domain Amico_0703 PF03129 Anticodon binding domain Amico_0704 PF00707 Translation initiation factor IF-3, C-terminal domain Amico_0704 PF05198 Translation initiation factor IF-3, N-terminal domain Amico_0705 PF01632 Ribosomal protein L35 Amico_0706 PF00453 Ribosomal protein L20 Amico_0707 PF02386 Cation transport protein Amico_0708 PF02080 TrkA-C domain Amico_0708 PF02254 TrkA-N domain Amico_0709 PF01409 tRNA synthetases class II core domain (F) Amico_0709 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Amico_0710 PF03484 tRNA synthetase B5 domain Amico_0710 PF01588 Putative tRNA binding domain Amico_0710 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Amico_0710 PF03483 B3/4 domain Amico_0710 PF03147 Ferredoxin-fold anticodon binding domain Amico_0714 PF01713 Smr domain Amico_0714 PF00488 MutS domain V Amico_0715 PF02971 Formiminotransferase domain Amico_0715 PF07837 Formiminotransferase domain, N-terminal subdomain Amico_0716 PF01614 Bacterial transcriptional regulator Amico_0716 PF09339 IclR helix-turn-helix domain Amico_0720 PF16868 NMT1-like family Amico_0722 PF01197 Ribosomal protein L31 Amico_0723 PF02511 Thymidylate synthase complementing protein Amico_0724 PF07136 Protein of unknown function (DUF1385) Amico_0725 PF00472 RF-1 domain Amico_0725 PF03462 PCRF domain Amico_0726 PF05175 Methyltransferase small domain Amico_0726 PF17827 PrmC N-terminal domain Amico_0727 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_0728 PF00294 pfkB family carbohydrate kinase Amico_0731 PF12169 DNA polymerase III subunits gamma and tau domain III Amico_0732 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Amico_0732 PF14579 Helix-hairpin-helix motif Amico_0732 PF01336 OB-fold nucleic acid binding domain Amico_0732 PF02811 PHP domain Amico_0732 PF07733 Bacterial DNA polymerase III alpha NTPase domain Amico_0733 PF02887 Pyruvate kinase, alpha/beta domain Amico_0733 PF00391 PEP-utilising enzyme, mobile domain Amico_0733 PF00224 Pyruvate kinase, barrel domain Amico_0735 PF01261 Xylose isomerase-like TIM barrel Amico_0736 PF01168 Alanine racemase, N-terminal domain Amico_0737 PF02457 DisA bacterial checkpoint controller nucleotide-binding Amico_0739 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Amico_0739 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Amico_0739 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Amico_0739 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Amico_0740 PF00483 Nucleotidyl transferase Amico_0741 PF01380 SIS domain Amico_0743 PF01979 Amidohydrolase family Amico_0743 PF13382 Adenine deaminase C-terminal domain Amico_0745 PF12804 MobA-like NTP transferase domain Amico_0745 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_0746 PF14572 Phosphoribosyl synthetase-associated domain Amico_0746 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Amico_0747 PF14693 Ribosomal protein TL5, C-terminal domain Amico_0747 PF01386 Ribosomal L25p family Amico_0748 PF01195 Peptidyl-tRNA hydrolase Amico_0749 PF03461 TRCF domain Amico_0749 PF00270 DEAD/DEAH box helicase Amico_0749 PF00271 Helicase conserved C-terminal domain Amico_0749 PF17757 UvrB interaction domain Amico_0749 PF02559 CarD-like/TRCF domain Amico_0750 PF03819 MazG nucleotide pyrophosphohydrolase domain Amico_0751 PF00364 Biotin-requiring enzyme Amico_0751 PF00682 HMGL-like Amico_0751 PF02436 Conserved carboxylase domain Amico_0752 PF02562 PhoH-like protein Amico_0753 PF01966 HD domain Amico_0753 PF07697 7TM-HD extracellular Amico_0753 PF07698 7TM receptor with intracellular HD hydrolase Amico_0754 PF02130 Uncharacterized protein family UPF0054 Amico_0755 PF01595 Cyclin M transmembrane N-terminal domain Amico_0755 PF03471 Transporter associated domain Amico_0755 PF00571 CBS domain Amico_0756 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Amico_0757 PF07650 KH domain Amico_0757 PF01926 50S ribosome-binding GTPase Amico_0759 PF02091 Glycyl-tRNA synthetase alpha subunit Amico_0760 PF05746 DALR anticodon binding domain Amico_0760 PF02092 Glycyl-tRNA synthetase beta subunit Amico_0761 PF03618 Kinase/pyrophosphorylase Amico_0762 PF03618 Kinase/pyrophosphorylase Amico_0763 PF00391 PEP-utilising enzyme, mobile domain Amico_0763 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Amico_0763 PF02896 PEP-utilising enzyme, TIM barrel domain Amico_0764 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Amico_0764 PF00391 PEP-utilising enzyme, mobile domain Amico_0764 PF02896 PEP-utilising enzyme, TIM barrel domain Amico_0765 PF17092 Penicillin-binding protein OB-like domain Amico_0765 PF00912 Transglycosylase Amico_0765 PF00905 Penicillin binding protein transpeptidase domain Amico_0766 PF00437 Type II/IV secretion system protein Amico_0777 PF11734 TilS substrate C-terminal domain Amico_0777 PF01171 PP-loop family Amico_0779 PF06480 FtsH Extracellular Amico_0779 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0779 PF01434 Peptidase family M41 Amico_0779 PF17862 AAA+ lid domain Amico_0780 PF12344 Ultra-violet resistance protein B Amico_0780 PF02151 UvrB/uvrC motif Amico_0780 PF17757 UvrB interaction domain Amico_0780 PF00271 Helicase conserved C-terminal domain Amico_0780 PF04851 Type III restriction enzyme, res subunit Amico_0781 PF17755 UvrA DNA-binding domain Amico_0781 PF17760 UvrA interaction domain Amico_0782 PF00588 SpoU rRNA Methylase family Amico_0782 PF08032 RNA 2'-O ribose methyltransferase substrate binding Amico_0783 PF14748 Pyrroline-5-carboxylate reductase dimerisation Amico_0783 PF03807 NADP oxidoreductase coenzyme F420-dependent Amico_0786 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_0786 PF00005 ABC transporter Amico_0787 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_0787 PF00005 ABC transporter Amico_0788 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amico_0790 PF01648 4'-phosphopantetheinyl transferase superfamily Amico_0791 PF03853 YjeF-related protein N-terminus Amico_0791 PF01256 Carbohydrate kinase Amico_0792 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Amico_0793 PF00814 Glycoprotease family Amico_0795 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amico_0795 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Amico_0795 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amico_0796 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amico_0800 PF05958 tRNA (Uracil-5-)-methyltransferase Amico_0800 PF01938 TRAM domain Amico_0802 PF01496 V-type ATPase 116kDa subunit family Amico_0803 PF00137 ATP synthase subunit C Amico_0804 PF01991 ATP synthase (E/31 kDa) subunit Amico_0807 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amico_0807 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amico_0807 PF16886 ATPsynthase alpha/beta subunit N-term extension Amico_0808 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amico_0808 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amico_0809 PF01813 ATP synthase subunit D Amico_0810 PF02381 MraZ protein, putative antitoxin-like Amico_0811 PF01795 MraW methylase family Amico_0813 PF03717 Penicillin-binding Protein dimerisation domain Amico_0813 PF00905 Penicillin binding protein transpeptidase domain Amico_0814 PF08245 Mur ligase middle domain Amico_0814 PF02875 Mur ligase family, glutamate ligase domain Amico_0814 PF01225 Mur ligase family, catalytic domain Amico_0815 PF08245 Mur ligase middle domain Amico_0815 PF02875 Mur ligase family, glutamate ligase domain Amico_0815 PF01225 Mur ligase family, catalytic domain Amico_0816 PF00953 Glycosyl transferase family 4 Amico_0817 PF02875 Mur ligase family, glutamate ligase domain Amico_0817 PF08245 Mur ligase middle domain Amico_0818 PF01098 Cell cycle protein Amico_0819 PF03033 Glycosyltransferase family 28 N-terminal domain Amico_0819 PF04101 Glycosyltransferase family 28 C-terminal domain Amico_0820 PF08245 Mur ligase middle domain Amico_0820 PF02875 Mur ligase family, glutamate ligase domain Amico_0820 PF01225 Mur ligase family, catalytic domain Amico_0821 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Amico_0821 PF01565 FAD binding domain Amico_0823 PF02491 SHS2 domain inserted in FTSA Amico_0824 PF12327 FtsZ family, C-terminal domain Amico_0824 PF00091 Tubulin/FtsZ family, GTPase domain Amico_0828 PF06463 Molybdenum Cofactor Synthesis C Amico_0828 PF04055 Radical SAM superfamily Amico_0829 PF01967 MoaC family Amico_0830 PF00994 Probable molybdopterin binding domain Amico_0831 PF03668 P-loop ATPase protein family Amico_0832 PF01933 Uncharacterised protein family UPF0052 Amico_0833 PF10298 WhiA N-terminal LAGLIDADG-like domain Amico_0833 PF14527 WhiA LAGLIDADG-like domain Amico_0833 PF02650 WhiA C-terminal HTH domain Amico_0834 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Amico_0834 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Amico_0835 PF00162 Phosphoglycerate kinase Amico_0836 PF00121 Triosephosphate isomerase Amico_0841 PF03816 Cell envelope-related transcriptional attenuator domain Amico_0842 PF01467 Cytidylyltransferase-like Amico_0843 PF01018 GTP1/OBG Amico_0843 PF01926 50S ribosome-binding GTPase Amico_0843 PF09269 Domain of unknown function (DUF1967) Amico_0846 PF00829 Ribosomal prokaryotic L21 protein Amico_0847 PF02463 RecF/RecN/SMC N terminal domain Amico_0848 PF01513 ATP-NAD kinase Amico_0849 PF01728 FtsJ-like methyltransferase Amico_0849 PF01479 S4 domain Amico_0850 PF02780 Transketolase, C-terminal domain Amico_0850 PF02779 Transketolase, pyrimidine binding domain Amico_0850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Amico_0851 PF00348 Polyprenyl synthetase Amico_0852 PF02609 Exonuclease VII small subunit Amico_0853 PF00830 Ribosomal L28 family Amico_0855 PF01580 FtsK/SpoIIIE family Amico_0855 PF17854 FtsK alpha domain Amico_0855 PF09397 Ftsk gamma domain Amico_0855 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Amico_0856 PF01523 Putative modulator of DNA gyrase Amico_0858 PF02618 YceG-like family Amico_0860 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Amico_0860 PF01871 AMMECR1 Amico_0861 PF02547 Queuosine biosynthesis protein Amico_0862 PF04122 Putative cell wall binding repeat 2 Amico_0862 PF08486 Stage II sporulation protein Amico_0863 PF11146 Protein of unknown function (DUF2905) Amico_0864 PF05496 Holliday junction DNA helicase RuvB P-loop domain Amico_0864 PF05491 RuvB C-terminal winged helix domain Amico_0864 PF17864 RuvB AAA lid domain Amico_0865 PF07499 RuvA, C-terminal domain Amico_0865 PF01330 RuvA N terminal domain Amico_0866 PF02075 Crossover junction endodeoxyribonuclease RuvC Amico_0867 PF01709 Transcriptional regulator Amico_0868 PF02540 NAD synthase Amico_0869 PF01402 Ribbon-helix-helix protein, copG family Amico_0869 PF08753 NikR C terminal nickel binding domain Amico_0870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Amico_0870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Amico_0871 PF04551 GcpE protein Amico_0872 PF02163 Peptidase family M50 Amico_0872 PF17820 PDZ domain Amico_0873 PF13288 DXP reductoisomerase C-terminal domain Amico_0873 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Amico_0873 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Amico_0875 PF01255 Putative undecaprenyl diphosphate synthase Amico_0876 PF03167 Uracil DNA glycosylase superfamily Amico_0879 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Amico_0880 PF02350 UDP-N-acetylglucosamine 2-epimerase Amico_0881 PF00953 Glycosyl transferase family 4 Amico_0883 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Amico_0886 PF01039 Carboxyl transferase domain Amico_0888 PF02310 B12 binding domain Amico_0888 PF01642 Methylmalonyl-CoA mutase Amico_0891 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Amico_0891 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Amico_0893 PF08245 Mur ligase middle domain Amico_0893 PF02875 Mur ligase family, glutamate ligase domain Amico_0894 PF00133 tRNA synthetases class I (I, L, M and V) Amico_0894 PF10458 Valyl tRNA synthetase tRNA binding arm Amico_0894 PF08264 Anticodon-binding domain of tRNA Amico_0895 PF01926 50S ribosome-binding GTPase Amico_0896 PF02190 ATP-dependent protease La (LON) substrate-binding domain Amico_0896 PF05362 Lon protease (S16) C-terminal proteolytic domain Amico_0896 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0897 PF07724 AAA domain (Cdc48 subfamily) Amico_0897 PF10431 C-terminal, D2-small domain, of ClpB protein Amico_0897 PF06689 ClpX C4-type zinc finger Amico_0898 PF00574 Clp protease Amico_0900 PF00313 'Cold-shock' DNA-binding domain Amico_0902 PF01979 Amidohydrolase family Amico_0905 PF04011 LemA family Amico_0908 PF08402 TOBE domain Amico_0908 PF00005 ABC transporter Amico_0909 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0913 PF03313 Serine dehydratase alpha chain Amico_0915 PF00330 Aconitase family (aconitate hydratase) Amico_0918 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_0921 PF02423 Ornithine cyclodeaminase/mu-crystallin family Amico_0926 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_0929 PF13619 KTSC domain Amico_0941 PF13091 PLD-like domain Amico_0941 PF13396 Phospholipase_D-nuclease N-terminal Amico_0942 PF00149 Calcineurin-like phosphoesterase Amico_0949 PF03796 DnaB-like helicase C terminal domain Amico_0949 PF00772 DnaB-like helicase N terminal domain Amico_0956 PF13378 Enolase C-terminal domain-like Amico_0956 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Amico_0960 PF00849 RNA pseudouridylate synthase Amico_0960 PF01479 S4 domain Amico_0961 PF06827 Zinc finger found in FPG and IleRS Amico_0961 PF08264 Anticodon-binding domain of tRNA Amico_0961 PF00133 tRNA synthetases class I (I, L, M and V) Amico_0964 PF01726 LexA DNA binding domain Amico_0964 PF00717 Peptidase S24-like Amico_0966 PF13438 Domain of unknown function (DUF4113) Amico_0966 PF00817 impB/mucB/samB family Amico_0966 PF11799 impB/mucB/samB family C-terminal domain Amico_0966 PF11798 IMS family HHH motif Amico_0967 PF06574 FAD synthetase Amico_0967 PF01687 Riboflavin kinase Amico_0968 PF01509 TruB family pseudouridylate synthase (N terminal domain) Amico_0968 PF16198 tRNA pseudouridylate synthase B C-terminal domain Amico_0969 PF01368 DHH family Amico_0969 PF02272 DHHA1 domain Amico_0970 PF02033 Ribosome-binding factor A Amico_0972 PF11987 Translation-initiation factor 2 Amico_0972 PF04760 Translation initiation factor IF-2, N-terminal region Amico_0972 PF00009 Elongation factor Tu GTP binding domain Amico_0974 PF04296 Protein of unknown function (DUF448) Amico_0975 PF00575 S1 RNA binding domain Amico_0975 PF08529 NusA N-terminal domain Amico_0975 PF13184 NusA-like KH domain Amico_0976 PF17384 RimP C-terminal SH3 domain Amico_0976 PF02576 RimP N-terminal domain Amico_0977 PF00478 IMP dehydrogenase / GMP reductase domain Amico_0977 PF00571 CBS domain Amico_0978 PF00749 tRNA synthetases class I (E and Q), catalytic domain Amico_0979 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Amico_0979 PF02542 YgbB family Amico_0981 PF13662 Toprim domain Amico_0981 PF02132 RecR protein Amico_0982 PF02575 YbaB/EbfC DNA-binding family Amico_0983 PF02590 Predicted SPOUT methyltransferase Amico_0984 PF01813 ATP synthase subunit D Amico_0985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amico_0985 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amico_0986 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amico_0986 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amico_0986 PF16886 ATPsynthase alpha/beta subunit N-term extension Amico_0991 PF18670 V-type ATPase subunit I, N-terminal domain Amico_0991 PF01496 V-type ATPase 116kDa subunit family Amico_0994 PF03808 Glycosyl transferase WecB/TagA/CpsF family Amico_0995 PF01546 Peptidase family M20/M25/M40 Amico_0995 PF07687 Peptidase dimerisation domain Amico_0996 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amico_0996 PF02403 Seryl-tRNA synthetase N-terminal domain Amico_0997 PF00885 6,7-dimethyl-8-ribityllumazine synthase Amico_0998 PF00925 GTP cyclohydrolase II Amico_0998 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Amico_0999 PF00677 Lumazine binding domain Amico_1000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Amico_1000 PF01872 RibD C-terminal domain Amico_1001 PF01541 GIY-YIG catalytic domain Amico_1001 PF02151 UvrB/uvrC motif Amico_1001 PF08459 UvrC Helix-hairpin-helix N-terminal Amico_1004 PF01546 Peptidase family M20/M25/M40 Amico_1004 PF07687 Peptidase dimerisation domain Amico_1005 PF03848 Tellurite resistance protein TehB Amico_1008 PF02915 Rubrerythrin Amico_1010 PF00293 NUDIX domain Amico_1010 PF13344 Haloacid dehalogenase-like hydrolase Amico_1011 PF01551 Peptidase family M23 Amico_1011 PF04225 Opacity-associated protein A LysM-like domain Amico_1012 PF02885 Glycosyl transferase family, helical bundle domain Amico_1012 PF00591 Glycosyl transferase family, a/b domain Amico_1012 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Amico_1013 PF01048 Phosphorylase superfamily Amico_1014 PF00589 Phage integrase family Amico_1014 PF02899 Phage integrase, N-terminal SAM-like domain Amico_1015 PF00293 NUDIX domain Amico_1018 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amico_1018 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Amico_1021 PF02911 Formyl transferase, C-terminal domain Amico_1021 PF00551 Formyl transferase Amico_1022 PF01327 Polypeptide deformylase Amico_1023 PF00575 S1 RNA binding domain Amico_1024 PF02401 LytB protein Amico_1026 PF08676 MutL C terminal dimerisation domain Amico_1026 PF01119 DNA mismatch repair protein, C-terminal domain Amico_1027 PF00488 MutS domain V Amico_1027 PF05190 MutS family domain IV Amico_1027 PF05192 MutS domain III Amico_1027 PF01624 MutS domain I Amico_1027 PF05188 MutS domain II Amico_1028 PF03652 Holliday junction resolvase Amico_1030 PF01979 Amidohydrolase family Amico_1031 PF05221 S-adenosyl-L-homocysteine hydrolase Amico_1031 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Amico_1032 PF01008 Initiation factor 2 subunit family Amico_1033 PF13742 OB-fold nucleic acid binding domain Amico_1033 PF02601 Exonuclease VII, large subunit Amico_1034 PF01029 NusB family Amico_1036 PF03780 Asp23 family, cell envelope-related function Amico_1038 PF09285 Elongation factor P, C-terminal Amico_1038 PF08207 Elongation factor P (EF-P) KOW-like domain Amico_1038 PF01132 Elongation factor P (EF-P) OB domain Amico_1040 PF01371 Trp repressor protein Amico_1042 PF05362 Lon protease (S16) C-terminal proteolytic domain Amico_1042 PF13654 AAA domain Amico_1044 PF00690 Cation transporter/ATPase, N-terminus Amico_1044 PF00689 Cation transporting ATPase, C-terminus Amico_1045 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Amico_1046 PF00708 Acylphosphatase Amico_1046 PF17788 HypF Kae1-like domain Amico_1046 PF01300 Telomere recombination Amico_1046 PF07503 HypF finger Amico_1047 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Amico_1048 PF10397 Adenylosuccinate lyase C-terminus Amico_1048 PF00206 Lyase Amico_1050 PF02881 SRP54-type protein, helical bundle domain Amico_1050 PF00448 SRP54-type protein, GTPase domain Amico_1051 PF04468 PSP1 C-terminal conserved region Amico_1052 PF09115 DNA polymerase III, delta subunit, C terminal Amico_1053 PF02223 Thymidylate kinase Amico_1054 PF05580 SpoIVB peptidase S55 Amico_1054 PF17820 PDZ domain Amico_1056 PF00586 AIR synthase related protein, N-terminal domain Amico_1056 PF02769 AIR synthase related protein, C-terminal domain Amico_1059 PF00156 Phosphoribosyl transferase domain Amico_1060 PF14622 Ribonuclease-III-like Amico_1060 PF00035 Double-stranded RNA binding motif Amico_1061 PF02801 Beta-ketoacyl synthase, C-terminal domain Amico_1061 PF00109 Beta-ketoacyl synthase, N-terminal domain Amico_1062 PF00550 Phosphopantetheine attachment site Amico_1064 PF00698 Acyl transferase domain Amico_1065 PF03060 Nitronate monooxygenase Amico_1066 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Amico_1066 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Amico_1067 PF02504 Fatty acid synthesis protein Amico_1069 PF01783 Ribosomal L32p protein family Amico_1071 PF00871 Acetokinase family Amico_1072 PF05636 HIGH Nucleotidyl Transferase Amico_1073 PF01467 Cytidylyltransferase-like Amico_1075 PF01980 tRNA-methyltransferase O Amico_1076 PF02390 Putative methyltransferase Amico_1077 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amico_1077 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amico_1077 PF10371 Domain of unknown function Amico_1077 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amico_1077 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Amico_1078 PF00398 Ribosomal RNA adenine dimethylase Amico_1079 PF00216 Bacterial DNA-binding protein Amico_1080 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Amico_1080 PF01926 50S ribosome-binding GTPase Amico_1081 PF18074 Primosomal protein N C-terminal domain Amico_1081 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Amico_1081 PF00271 Helicase conserved C-terminal domain Amico_1081 PF17764 3′ DNA-binding domain (3′BD) Amico_1081 PF04851 Type III restriction enzyme, res subunit Amico_1082 PF04127 DNA / pantothenate metabolism flavoprotein Amico_1082 PF02441 Flavoprotein Amico_1084 PF00625 Guanylate kinase Amico_1085 PF04025 Domain of unknown function (DUF370) Amico_1086 PF08340 Domain of unknown function (DUF1732) Amico_1086 PF03755 YicC-like family, N-terminal region Amico_1087 PF16360 GTP-binding GTPase Middle Region Amico_1087 PF13167 GTP-binding GTPase N-terminal Amico_1087 PF01926 50S ribosome-binding GTPase Amico_1088 PF13193 AMP-binding enzyme C-terminal domain Amico_1088 PF00501 AMP-binding enzyme Amico_1088 PF01553 Acyltransferase Amico_1089 PF02224 Cytidylate kinase Amico_1090 PF00849 RNA pseudouridylate synthase Amico_1090 PF01479 S4 domain Amico_1091 PF04079 Segregation and condensation complex subunit ScpB Amico_1092 PF02616 Segregation and condensation protein ScpA Amico_1093 PF00579 tRNA synthetases class I (W and Y) Amico_1094 PF01784 NIF3 (NGG1p interacting factor 3) Amico_1125 PF00589 Phage integrase family Amico_1131 PF01695 IstB-like ATP binding protein Amico_1133 PF00692 dUTPase Amico_1142 PF01381 Helix-turn-helix Amico_1147 PF02463 RecF/RecN/SMC N terminal domain Amico_1151 PF14659 Phage integrase, N-terminal SAM-like domain Amico_1151 PF00589 Phage integrase family Amico_1151 PF13356 Arm DNA-binding domain Amico_1153 PF00156 Phosphoribosyl transferase domain Amico_1153 PF09182 Bacterial purine repressor, N-terminal Amico_1154 PF00288 GHMP kinases N terminal domain Amico_1154 PF08544 GHMP kinases C terminal Amico_1156 PF09107 Elongation factor SelB, winged helix Amico_1156 PF09106 Elongation factor SelB, winged helix Amico_1156 PF09105 Elongation factor SelB, winged helix Amico_1156 PF03144 Elongation factor Tu domain 2 Amico_1156 PF00009 Elongation factor Tu GTP binding domain Amico_1157 PF03841 L-seryl-tRNA selenium transferase Amico_1160 PF04055 Radical SAM superfamily Amico_1161 PF03144 Elongation factor Tu domain 2 Amico_1161 PF06421 GTP-binding protein LepA C-terminus Amico_1161 PF14492 Elongation Factor G, domain II Amico_1161 PF00009 Elongation factor Tu GTP binding domain Amico_1161 PF00679 Elongation factor G C-terminus Amico_1162 PF01259 SAICAR synthetase Amico_1163 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Amico_1165 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Amico_1165 PF02769 AIR synthase related protein, C-terminal domain Amico_1165 PF00586 AIR synthase related protein, N-terminal domain Amico_1166 PF00156 Phosphoribosyl transferase domain Amico_1167 PF00586 AIR synthase related protein, N-terminal domain Amico_1167 PF02769 AIR synthase related protein, C-terminal domain Amico_1168 PF00551 Formyl transferase Amico_1169 PF01808 AICARFT/IMPCHase bienzyme Amico_1169 PF02142 MGS-like domain Amico_1170 PF02843 Phosphoribosylglycinamide synthetase, C domain Amico_1170 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Amico_1170 PF02844 Phosphoribosylglycinamide synthetase, N domain Amico_1171 PF00731 AIR carboxylase Amico_1173 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amico_1174 PF00764 Arginosuccinate synthase Amico_1175 PF01975 Survival protein SurE Amico_1176 PF02163 Peptidase family M50 Amico_1177 PF01743 Poly A polymerase head domain Amico_1177 PF12627 Probable RNA and SrmB- binding site of polymerase A Amico_1177 PF01966 HD domain Amico_1178 PF01121 Dephospho-CoA kinase Amico_1179 PF00580 UvrD/REP helicase N-terminal domain Amico_1179 PF13361 UvrD-like helicase C-terminal domain Amico_1180 PF02492 CobW/HypB/UreG, nucleotide-binding domain Amico_1181 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Amico_1182 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Amico_1182 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Amico_1183 PF00155 Aminotransferase class I and II Amico_1184 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amico_1184 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amico_1185 PF00860 Permease family Amico_1186 PF01765 Ribosome recycling factor Amico_1187 PF00696 Amino acid kinase family Amico_1188 PF00889 Elongation factor TS Amico_1189 PF00318 Ribosomal protein S2 Amico_1190 PF02583 Metal-sensitive transcriptional repressor Amico_1191 PF01161 Phosphatidylethanolamine-binding protein Amico_1193 PF07687 Peptidase dimerisation domain Amico_1193 PF01546 Peptidase family M20/M25/M40 Amico_1194 PF00571 CBS domain Amico_1194 PF01769 Divalent cation transporter Amico_1194 PF03448 MgtE intracellular N domain Amico_1199 PF00437 Type II/IV secretion system protein Amico_1200 PF01339 CheB methylesterase Amico_1200 PF00072 Response regulator receiver domain Amico_1201 PF03958 Bacterial type II/III secretion system short domain Amico_1201 PF00263 Bacterial type II and III secretion system protein Amico_1205 PF01478 Type IV leader peptidase family Amico_1208 PF00072 Response regulator receiver domain Amico_1208 PF00196 Bacterial regulatory proteins, luxR family Amico_1209 PF13185 GAF domain Amico_1209 PF07730 Histidine kinase Amico_1210 PF00108 Thiolase, N-terminal domain Amico_1210 PF02803 Thiolase, C-terminal domain Amico_1211 PF01144 Coenzyme A transferase Amico_1212 PF01144 Coenzyme A transferase Amico_1215 PF00202 Aminotransferase class-III Amico_1217 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Amico_1219 PF00873 AcrB/AcrD/AcrF family Amico_1221 PF00990 Diguanylate cyclase, GGDEF domain Amico_1221 PF05230 MASE2 domain Amico_1226 PF02652 L-lactate permease Amico_1227 PF00155 Aminotransferase class I and II Amico_1229 PF02915 Rubrerythrin Amico_1230 PF14437 MafB19-like deaminase Amico_1234 PF17886 HSP20-like domain found in ArsA Amico_1234 PF02374 Anion-transporting ATPase Amico_1236 PF01361 Tautomerase enzyme Amico_1237 PF18113 Rubredoxin binding C-terminal domain Amico_1237 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1238 PF02127 Aminopeptidase I zinc metalloprotease (M18) Amico_1239 PF05161 MOFRL family Amico_1239 PF13660 Domain of unknown function (DUF4147) Amico_1243 PF02358 Trehalose-phosphatase Amico_1243 PF03636 Glycosyl hydrolase family 65, N-terminal domain Amico_1243 PF03632 Glycosyl hydrolase family 65 central catalytic domain Amico_1243 PF03633 Glycosyl hydrolase family 65, C-terminal domain Amico_1244 PF03633 Glycosyl hydrolase family 65, C-terminal domain Amico_1244 PF02358 Trehalose-phosphatase Amico_1244 PF03636 Glycosyl hydrolase family 65, N-terminal domain Amico_1244 PF03632 Glycosyl hydrolase family 65 central catalytic domain Amico_1248 PF07670 Nucleoside recognition Amico_1248 PF02421 Ferrous iron transport protein B Amico_1248 PF17910 FeoB cytosolic helical domain Amico_1248 PF07664 Ferrous iron transport protein B C terminus Amico_1249 PF00857 Isochorismatase family Amico_1250 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amico_1250 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Amico_1251 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amico_1252 PF02423 Ornithine cyclodeaminase/mu-crystallin family Amico_1255 PF01177 Asp/Glu/Hydantoin racemase Amico_1257 PF00293 NUDIX domain Amico_1259 PF00476 DNA polymerase family A Amico_1259 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Amico_1259 PF01367 5'-3' exonuclease, C-terminal SAM fold Amico_1260 PF00571 CBS domain Amico_1260 PF07085 DRTGG domain Amico_1260 PF02833 DHHA2 domain Amico_1260 PF01368 DHH family Amico_1261 PF00749 tRNA synthetases class I (E and Q), catalytic domain Amico_1262 PF12838 4Fe-4S dicluster domain Amico_1263 PF00146 NADH dehydrogenase Amico_1264 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Amico_1264 PF00374 Nickel-dependent hydrogenase Amico_1264 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Amico_1265 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Amico_1265 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Amico_1266 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Amico_1268 PF00361 Proton-conducting membrane transporter Amico_1269 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Amico_1271 PF13244 Domain of unknown function (DUF4040) Amico_1271 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Amico_1271 PF00361 Proton-conducting membrane transporter Amico_1271 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Amico_1273 PF03334 Na+/H+ antiporter subunit Amico_1274 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Amico_1275 PF01899 Na+/H+ ion antiporter subunit Amico_1278 PF04055 Radical SAM superfamily Amico_1278 PF08497 Radical SAM N-terminal Amico_1278 PF11842 Domain of unknown function (DUF3362) Amico_1280 PF02146 Sir2 family Amico_1281 PF01544 CorA-like Mg2+ transporter protein Amico_1287 PF02080 TrkA-C domain Amico_1287 PF02254 TrkA-N domain Amico_1288 PF02386 Cation transport protein Amico_1289 PF00999 Sodium/hydrogen exchanger family Amico_1289 PF03471 Transporter associated domain Amico_1291 PF01595 Cyclin M transmembrane N-terminal domain Amico_1291 PF00571 CBS domain Amico_1291 PF03471 Transporter associated domain Amico_1294 PF04172 LrgB-like family Amico_1295 PF03788 LrgA family Amico_1296 PF01042 Endoribonuclease L-PSP Amico_1297 PF01970 Tripartite tricarboxylate transporter TctA family Amico_1300 PF01557 Fumarylacetoacetate (FAA) hydrolase family Amico_1301 PF00180 Isocitrate/isopropylmalate dehydrogenase Amico_1301 PF18324 Hypothetical protein TT1725 Amico_1302 PF00392 Bacterial regulatory proteins, gntR family Amico_1302 PF07729 FCD domain Amico_1303 PF00465 Iron-containing alcohol dehydrogenase Amico_1304 PF09861 Lactate racemase N-terminal domain Amico_1305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1306 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Amico_1307 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1308 PF00682 HMGL-like Amico_1309 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amico_1309 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amico_1309 PF01842 ACT domain Amico_1310 PF00392 Bacterial regulatory proteins, gntR family Amico_1310 PF07729 FCD domain Amico_1313 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amico_1315 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Amico_1315 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amico_1316 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amico_1319 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1321 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1323 PF02515 CoA-transferase family III Amico_1324 PF00682 HMGL-like Amico_1325 PF02615 Malate/L-lactate dehydrogenase Amico_1329 PF02687 FtsX-like permease family Amico_1329 PF12704 MacB-like periplasmic core domain Amico_1329 PF00005 ABC transporter Amico_1332 PF00258 Flavodoxin Amico_1332 PF00753 Metallo-beta-lactamase superfamily Amico_1333 PF04343 Protein of unknown function, DUF488 Amico_1334 PF01381 Helix-turn-helix Amico_1337 PF00271 Helicase conserved C-terminal domain Amico_1337 PF00176 SNF2 family N-terminal domain Amico_1338 PF07690 Major Facilitator Superfamily Amico_1339 PF01427 D-ala-D-ala dipeptidase Amico_1340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1342 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1346 PF00440 Bacterial regulatory proteins, tetR family Amico_1349 PF00005 ABC transporter Amico_1350 PF01668 SmpB protein Amico_1352 PF00857 Isochorismatase family Amico_1353 PF03949 Malic enzyme, NAD binding domain Amico_1353 PF00390 Malic enzyme, N-terminal domain Amico_1354 PF08240 Alcohol dehydrogenase GroES-like domain Amico_1354 PF00107 Zinc-binding dehydrogenase Amico_1357 PF08645 Polynucleotide kinase 3 phosphatase Amico_1359 PF16363 GDP-mannose 4,6 dehydratase Amico_1360 PF00483 Nucleotidyl transferase Amico_1361 PF13580 SIS domain Amico_1362 PF00072 Response regulator receiver domain Amico_1362 PF00196 Bacterial regulatory proteins, luxR family Amico_1363 PF01171 PP-loop family Amico_1364 PF01458 Uncharacterized protein family (UPF0051) Amico_1365 PF00005 ABC transporter Amico_1366 PF00342 Phosphoglucose isomerase Amico_1367 PF00462 Glutaredoxin Amico_1368 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Amico_1368 PF00970 Oxidoreductase FAD-binding domain Amico_1368 PF00175 Oxidoreductase NAD-binding domain Amico_1369 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1369 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Amico_1371 PF03144 Elongation factor Tu domain 2 Amico_1371 PF00679 Elongation factor G C-terminus Amico_1371 PF00009 Elongation factor Tu GTP binding domain Amico_1371 PF14492 Elongation Factor G, domain II Amico_1371 PF03764 Elongation factor G, domain IV Amico_1372 PF02934 GatB/GatE catalytic domain Amico_1372 PF02637 GatB domain Amico_1373 PF01425 Amidase Amico_1374 PF02686 Glu-tRNAGln amidotransferase C subunit Amico_1375 PF00533 BRCA1 C Terminus (BRCT) domain Amico_1375 PF12826 Helix-hairpin-helix motif Amico_1375 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Amico_1375 PF03120 NAD-dependent DNA ligase OB-fold domain Amico_1375 PF01653 NAD-dependent DNA ligase adenylation domain Amico_1376 PF00152 tRNA synthetases class II (D, K and N) Amico_1376 PF01336 OB-fold nucleic acid binding domain Amico_1377 PF01207 Dihydrouridine synthase (Dus) Amico_1378 PF03309 Type III pantothenate kinase Amico_1379 PF00753 Metallo-beta-lactamase superfamily Amico_1379 PF13567 Domain of unknown function (DUF4131) Amico_1379 PF03772 Competence protein Amico_1381 PF00919 Uncharacterized protein family UPF0004 Amico_1381 PF01938 TRAM domain Amico_1381 PF04055 Radical SAM superfamily Amico_1383 PF01464 Transglycosylase SLT domain Amico_1383 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amico_1384 PF00301 Rubredoxin Amico_1385 PF00557 Metallopeptidase family M24 Amico_1385 PF01321 Creatinase/Prolidase N-terminal domain Amico_1386 PF02769 AIR synthase related protein, C-terminal domain Amico_1386 PF00586 AIR synthase related protein, N-terminal domain Amico_1387 PF02677 Epoxyqueuosine reductase QueH Amico_1388 PF02779 Transketolase, pyrimidine binding domain Amico_1388 PF02780 Transketolase, C-terminal domain Amico_1388 PF00456 Transketolase, thiamine diphosphate binding domain Amico_1389 PF00842 Alanine racemase, C-terminal domain Amico_1389 PF01168 Alanine racemase, N-terminal domain Amico_1390 PF01235 Sodium:alanine symporter family Amico_1391 PF02504 Fatty acid synthesis protein Amico_1392 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Amico_1393 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Amico_1394 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Amico_1395 PF04723 Glycine reductase complex selenoprotein A Amico_1396 PF04723 Glycine reductase complex selenoprotein A Amico_1397 PF09338 Glycine/sarcosine/betaine reductase component B subunits Amico_1398 PF00085 Thioredoxin Amico_1400 PF00209 Sodium:neurotransmitter symporter family Amico_1401 PF01455 HupF/HypC family Amico_1402 PF01924 Hydrogenase formation hypA family Amico_1403 PF00586 AIR synthase related protein, N-terminal domain Amico_1403 PF02769 AIR synthase related protein, C-terminal domain Amico_1404 PF13277 YmdB-like protein Amico_1405 PF12072 Domain of unknown function (DUF3552) Amico_1405 PF00013 KH domain Amico_1405 PF01966 HD domain Amico_1406 PF02631 RecX family Amico_1407 PF17191 RecG wedge domain Amico_1407 PF00271 Helicase conserved C-terminal domain Amico_1407 PF00270 DEAD/DEAH box helicase Amico_1408 PF05103 DivIVA protein Amico_1409 PF04472 Cell division protein SepF Amico_1410 PF01168 Alanine racemase, N-terminal domain Amico_1412 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amico_1412 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amico_1413 PF02649 Type I GTP cyclohydrolase folE2 Amico_1414 PF01242 6-pyruvoyl tetrahydropterin synthase Amico_1415 PF12437 Glutamine synthetase type III N terminal Amico_1415 PF18318 Glutamine synthetase C-terminal domain Amico_1415 PF00120 Glutamine synthetase, catalytic domain Amico_1417 PF00772 DnaB-like helicase N terminal domain Amico_1417 PF03796 DnaB-like helicase C terminal domain Amico_1420 PF01084 Ribosomal protein S18 Amico_1421 PF00436 Single-strand binding protein family Amico_1422 PF01250 Ribosomal protein S6 Amico_1424 PF03485 Arginyl tRNA synthetase N terminal domain Amico_1424 PF05746 DALR anticodon binding domain Amico_1424 PF00750 tRNA synthetases class I (R) Amico_1426 PF01043 SecA preprotein cross-linking domain Amico_1426 PF07517 SecA DEAD-like domain Amico_1426 PF02810 SEC-C motif Amico_1426 PF07516 SecA Wing and Scaffold domain Amico_1427 PF07687 Peptidase dimerisation domain Amico_1427 PF01546 Peptidase family M20/M25/M40 Amico_1428 PF01066 CDP-alcohol phosphatidyltransferase Amico_1429 PF00005 ABC transporter Amico_1430 PF12399 Branched-chain amino acid ATP-binding cassette transporter Amico_1430 PF00005 ABC transporter Amico_1431 PF02653 Branched-chain amino acid transport system / permease component Amico_1431 PF11862 Domain of unknown function (DUF3382) Amico_1432 PF02653 Branched-chain amino acid transport system / permease component Amico_1434 PF03477 ATP cone domain Amico_1436 PF01165 Ribosomal protein S21 Amico_1437 PF01230 HIT domain Amico_1438 PF04055 Radical SAM superfamily Amico_1438 PF00919 Uncharacterized protein family UPF0004 Amico_1438 PF01938 TRAM domain Amico_1440 PF01556 DnaJ C terminal domain Amico_1440 PF00226 DnaJ domain Amico_1440 PF00684 DnaJ central domain Amico_1441 PF00012 Hsp70 protein Amico_1442 PF01025 GrpE Amico_1443 PF01628 HrcA protein C terminal domain Amico_1445 PF00809 Pterin binding enzyme Amico_1446 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Amico_1448 PF00578 AhpC/TSA family Amico_1449 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amico_1452 PF02554 Carbon starvation protein CstA Amico_1452 PF13722 5TM C-terminal transporter carbon starvation CstA Amico_1454 PF00709 Adenylosuccinate synthetase Amico_1455 PF04748 Divergent polysaccharide deacetylase Amico_1456 PF13180 PDZ domain Amico_1456 PF03572 Peptidase family S41 Amico_1457 PF04225 Opacity-associated protein A LysM-like domain Amico_1457 PF01551 Peptidase family M23 Amico_1458 PF02687 FtsX-like permease family Amico_1458 PF18075 FtsX extracellular domain Amico_1459 PF00005 ABC transporter Amico_1460 PF02780 Transketolase, C-terminal domain Amico_1460 PF02779 Transketolase, pyrimidine binding domain Amico_1461 PF00456 Transketolase, thiamine diphosphate binding domain Amico_1464 PF02545 Maf-like protein Amico_1466 PF02673 Bacitracin resistance protein BacA Amico_1467 PF00753 Metallo-beta-lactamase superfamily Amico_1467 PF17770 Ribonuclease J C-terminal domain Amico_1467 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Amico_1468 PF01272 Transcription elongation factor, GreA/GreB, C-term Amico_1468 PF03449 Transcription elongation factor, N-terminal Amico_1469 PF01820 D-ala D-ala ligase N-terminus Amico_1469 PF07478 D-ala D-ala ligase C-terminus Amico_1474 PF00117 Glutamine amidotransferase class-I Amico_1474 PF06418 CTP synthase N-terminus Amico_1475 PF01551 Peptidase family M23 Amico_1476 PF07497 Rho termination factor, RNA-binding domain Amico_1476 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amico_1476 PF07498 Rho termination factor, N-terminal domain Amico_1477 PF00923 Transaldolase/Fructose-6-phosphate aldolase Amico_1481 PF00365 Phosphofructokinase Amico_1484 PF00395 S-layer homology domain Amico_1486 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Amico_1487 PF00534 Glycosyl transferases group 1 Amico_1487 PF13439 Glycosyltransferase Family 4 Amico_1488 PF13439 Glycosyltransferase Family 4 Amico_1488 PF00534 Glycosyl transferases group 1 Amico_1490 PF02348 Cytidylyltransferase Amico_1492 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Amico_1493 PF01380 SIS domain Amico_1493 PF00571 CBS domain Amico_1494 PF00793 DAHP synthetase I family Amico_1495 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Amico_1496 PF00664 ABC transporter transmembrane region Amico_1496 PF00005 ABC transporter Amico_1498 PF02684 Lipid-A-disaccharide synthetase Amico_1499 PF06230 LpxI C-terminal domain Amico_1499 PF17930 LpxI N-terminal domain Amico_1502 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_1502 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Amico_1503 PF07977 FabA-like domain Amico_1504 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Amico_1505 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_1505 PF14602 Hexapeptide repeat of succinyl-transferase Amico_1505 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Amico_1509 PF00140 Sigma-70 factor, region 1.2 Amico_1509 PF04539 Sigma-70 region 3 Amico_1509 PF04545 Sigma-70, region 4 Amico_1509 PF04542 Sigma-70 region 2 Amico_1510 PF00300 Histidine phosphatase superfamily (branch 1) Amico_1511 PF00144 Beta-lactamase Amico_1514 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Amico_1514 PF01138 3' exoribonuclease family, domain 1 Amico_1514 PF00575 S1 RNA binding domain Amico_1514 PF00013 KH domain Amico_1514 PF03725 3' exoribonuclease family, domain 2 Amico_1515 PF00072 Response regulator receiver domain Amico_1516 PF08222 CodY helix-turn-helix domain Amico_1516 PF06018 CodY GAF-like domain Amico_1517 PF10431 C-terminal, D2-small domain, of ClpB protein Amico_1517 PF00004 ATPase family associated with various cellular activities (AAA) Amico_1517 PF07724 AAA domain (Cdc48 subfamily) Amico_1518 PF00227 Proteasome subunit Amico_1519 PF02899 Phage integrase, N-terminal SAM-like domain Amico_1519 PF00589 Phage integrase family Amico_1520 PF01134 Glucose inhibited division protein A Amico_1521 PF01131 DNA topoisomerase Amico_1521 PF01396 Topoisomerase DNA binding C4 zinc finger Amico_1521 PF01751 Toprim domain Amico_1523 PF17782 DprA winged helix domain Amico_1523 PF02481 DNA recombination-mediator protein A Amico_1524 PF01078 Magnesium chelatase, subunit ChlI Amico_1524 PF13335 Magnesium chelatase, subunit ChlI C-terminal Amico_1525 PF02021 Uncharacterised protein family UPF0102 Amico_1526 PF01351 Ribonuclease HII Amico_1527 PF01926 50S ribosome-binding GTPase Amico_1528 PF10502 Signal peptidase, peptidase S26 Amico_1532 PF03061 Thioesterase superfamily Amico_1534 PF00571 CBS domain Amico_1534 PF01769 Divalent cation transporter Amico_1534 PF03448 MgtE intracellular N domain Amico_1535 PF02423 Ornithine cyclodeaminase/mu-crystallin family Amico_1536 PF10502 Signal peptidase, peptidase S26 Amico_1537 PF01268 Formate--tetrahydrofolate ligase Amico_1538 PF04961 Formiminotransferase-cyclodeaminase Amico_1539 PF07837 Formiminotransferase domain, N-terminal subdomain Amico_1539 PF02971 Formiminotransferase domain Amico_1540 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1541 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1542 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Amico_1543 PF07687 Peptidase dimerisation domain Amico_1543 PF01546 Peptidase family M20/M25/M40 Amico_1545 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Amico_1545 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Amico_1546 PF01268 Formate--tetrahydrofolate ligase Amico_1547 PF01139 tRNA-splicing ligase RtcB Amico_1549 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Amico_1550 PF04015 Domain of unknown function (DUF362) Amico_1553 PF00374 Nickel-dependent hydrogenase Amico_1554 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Amico_1555 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Amico_1555 PF01568 Molydopterin dinucleotide binding domain Amico_1555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Amico_1555 PF00037 4Fe-4S binding domain Amico_1555 PF00384 Molybdopterin oxidoreductase Amico_1556 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Amico_1556 PF00037 4Fe-4S binding domain Amico_1556 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amico_1559 PF12857 TOBE-like domain Amico_1559 PF00005 ABC transporter Amico_1560 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1561 PF12849 PBP superfamily domain Amico_1563 PF01293 Phosphoenolpyruvate carboxykinase Amico_1565 PF04055 Radical SAM superfamily Amico_1570 PF02608 ABC transporter substrate-binding protein PnrA-like Amico_1571 PF02872 5'-nucleotidase, C-terminal domain Amico_1571 PF00149 Calcineurin-like phosphoesterase Amico_1572 PF03167 Uracil DNA glycosylase superfamily Amico_1574 PF10437 Bacterial lipoate protein ligase C-terminus Amico_1574 PF03099 Biotin/lipoate A/B protein ligase family Amico_1575 PF00005 ABC transporter Amico_1575 PF08402 TOBE domain Amico_1576 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1578 PF03099 Biotin/lipoate A/B protein ligase family Amico_1578 PF10437 Bacterial lipoate protein ligase C-terminus Amico_1579 PF08669 Glycine cleavage T-protein C-terminal barrel domain Amico_1579 PF01571 Aminomethyltransferase folate-binding domain Amico_1580 PF01597 Glycine cleavage H-protein Amico_1581 PF02347 Glycine cleavage system P-protein Amico_1582 PF02347 Glycine cleavage system P-protein Amico_1583 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Amico_1583 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1584 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Amico_1584 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1585 PF02817 e3 binding domain Amico_1585 PF00364 Biotin-requiring enzyme Amico_1585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Amico_1586 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Amico_1586 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1587 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Amico_1587 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1588 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1590 PF02779 Transketolase, pyrimidine binding domain Amico_1590 PF02780 Transketolase, C-terminal domain Amico_1591 PF00676 Dehydrogenase E1 component Amico_1592 PF07729 FCD domain Amico_1592 PF00392 Bacterial regulatory proteins, gntR family Amico_1593 PF01661 Macro domain Amico_1596 PF00156 Phosphoribosyl transferase domain Amico_1597 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Amico_1598 PF01180 Dihydroorotate dehydrogenase Amico_1599 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Amico_1600 PF01979 Amidohydrolase family Amico_1601 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Amico_1601 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Amico_1602 PF00156 Phosphoribosyl transferase domain Amico_1603 PF00155 Aminotransferase class I and II Amico_1604 PF02548 Ketopantoate hydroxymethyltransferase Amico_1605 PF01614 Bacterial transcriptional regulator Amico_1605 PF09339 IclR helix-turn-helix domain Amico_1608 PF00892 EamA-like transporter family Amico_1609 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amico_1609 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amico_1611 PF13193 AMP-binding enzyme C-terminal domain Amico_1611 PF00501 AMP-binding enzyme Amico_1614 PF00731 AIR carboxylase Amico_1616 PF01546 Peptidase family M20/M25/M40 Amico_1616 PF07687 Peptidase dimerisation domain Amico_1621 PF00072 Response regulator receiver domain Amico_1621 PF00990 Diguanylate cyclase, GGDEF domain Amico_1622 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Amico_1622 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amico_1627 PF04539 Sigma-70 region 3 Amico_1627 PF04545 Sigma-70, region 4 Amico_1627 PF03979 Sigma-70 factor, region 1.1 Amico_1627 PF04542 Sigma-70 region 2 Amico_1627 PF00140 Sigma-70 factor, region 1.2 Amico_1628 PF03577 Peptidase family C69 Amico_1634 PF03577 Peptidase family C69 Amico_1636 PF01554 MatE Amico_1638 PF03190 Protein of unknown function, DUF255 Amico_1640 PF03591 AzlC protein Amico_1641 PF13419 Haloacid dehalogenase-like hydrolase Amico_1642 PF00742 Homoserine dehydrogenase Amico_1642 PF01842 ACT domain Amico_1642 PF03447 Homoserine dehydrogenase, NAD binding domain Amico_1644 PF12705 PD-(D/E)XK nuclease superfamily Amico_1644 PF13361 UvrD-like helicase C-terminal domain Amico_1644 PF00580 UvrD/REP helicase N-terminal domain Amico_1645 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Amico_1645 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Amico_1647 PF00986 DNA gyrase B subunit, carboxyl terminus Amico_1647 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_1647 PF01751 Toprim domain Amico_1647 PF00204 DNA gyrase B Amico_1649 PF02789 Cytosol aminopeptidase family, N-terminal domain Amico_1649 PF00883 Cytosol aminopeptidase family, catalytic domain Amico_1650 PF03576 Peptidase family S58 Amico_1652 PF07729 FCD domain Amico_1652 PF00392 Bacterial regulatory proteins, gntR family Amico_1654 PF01546 Peptidase family M20/M25/M40 Amico_1654 PF07687 Peptidase dimerisation domain Amico_1655 PF01321 Creatinase/Prolidase N-terminal domain Amico_1655 PF00557 Metallopeptidase family M24 Amico_1656 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amico_1658 PF00005 ABC transporter Amico_1658 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_1659 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_1659 PF00005 ABC transporter Amico_1661 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1662 PF13735 tRNA nucleotidyltransferase domain 2 putative Amico_1662 PF01743 Poly A polymerase head domain Amico_1662 PF12627 Probable RNA and SrmB- binding site of polymerase A Amico_1663 PF02615 Malate/L-lactate dehydrogenase Amico_1664 PF09861 Lactate racemase N-terminal domain Amico_1665 PF01081 KDPG and KHG aldolase Amico_1667 PF00005 ABC transporter Amico_1667 PF09383 NIL domain Amico_1668 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1669 PF03180 NLPA lipoprotein Amico_1670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Amico_1670 PF13378 Enolase C-terminal domain-like Amico_1671 PF00294 pfkB family carbohydrate kinase Amico_1673 PF09339 IclR helix-turn-helix domain Amico_1673 PF01614 Bacterial transcriptional regulator Amico_1674 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1676 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1677 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Amico_1677 PF08666 SAF domain Amico_1678 PF12849 PBP superfamily domain Amico_1679 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1680 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1681 PF00005 ABC transporter Amico_1683 PF00072 Response regulator receiver domain Amico_1683 PF00486 Transcriptional regulatory protein, C terminal Amico_1684 PF00672 HAMP domain Amico_1684 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_1684 PF13426 PAS domain Amico_1684 PF00512 His Kinase A (phospho-acceptor) domain Amico_1687 PF00149 Calcineurin-like phosphoesterase Amico_1688 PF01614 Bacterial transcriptional regulator Amico_1688 PF09339 IclR helix-turn-helix domain Amico_1690 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Amico_1690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1691 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1692 PF00202 Aminotransferase class-III Amico_1694 PF00291 Pyridoxal-phosphate dependent enzyme Amico_1698 PF00245 Alkaline phosphatase Amico_1701 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1703 PF00694 Aconitase C-terminal domain Amico_1704 PF00330 Aconitase family (aconitate hydratase) Amico_1715 PF02719 Polysaccharide biosynthesis protein Amico_1716 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Amico_1717 PF02397 Bacterial sugar transferase Amico_1720 PF02350 UDP-N-acetylglucosamine 2-epimerase Amico_1723 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Amico_1723 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Amico_1726 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Amico_1726 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Amico_1726 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Amico_1731 PF16363 GDP-mannose 4,6 dehydratase Amico_1733 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Amico_1734 PF00483 Nucleotidyl transferase Amico_1749 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1750 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Amico_1751 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1753 PF01842 ACT domain Amico_1753 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amico_1753 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amico_1754 PF07969 Amidohydrolase family Amico_1756 PF02347 Glycine cleavage system P-protein Amico_1757 PF02347 Glycine cleavage system P-protein Amico_1758 PF01979 Amidohydrolase family Amico_1758 PF00449 Urease alpha-subunit, N-terminal domain Amico_1759 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1762 PF06865 Pyrimidine/purine nucleoside phosphorylase Amico_1763 PF00392 Bacterial regulatory proteins, gntR family Amico_1763 PF07729 FCD domain Amico_1764 PF01594 AI-2E family transporter Amico_1765 PF03841 L-seryl-tRNA selenium transferase Amico_1766 PF00291 Pyridoxal-phosphate dependent enzyme Amico_1767 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Amico_1767 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1768 PF00701 Dihydrodipicolinate synthetase family Amico_1771 PF16868 NMT1-like family Amico_1773 PF13847 Methyltransferase domain Amico_1774 PF00313 'Cold-shock' DNA-binding domain Amico_1776 PF01741 Large-conductance mechanosensitive channel, MscL Amico_1777 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amico_1778 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1779 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1779 PF12911 N-terminal TM domain of oligopeptide transport permease C Amico_1780 PF00005 ABC transporter Amico_1780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_1781 PF00005 ABC transporter Amico_1781 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_1783 PF13456 Reverse transcriptase-like Amico_1783 PF00300 Histidine phosphatase superfamily (branch 1) Amico_1784 PF04321 RmlD substrate binding domain Amico_1785 PF00464 Serine hydroxymethyltransferase Amico_1786 PF00155 Aminotransferase class I and II Amico_1787 PF01370 NAD dependent epimerase/dehydratase family Amico_1790 PF00390 Malic enzyme, N-terminal domain Amico_1790 PF03949 Malic enzyme, NAD binding domain Amico_1791 PF13193 AMP-binding enzyme C-terminal domain Amico_1791 PF00501 AMP-binding enzyme Amico_1792 PF00117 Glutamine amidotransferase class-I Amico_1792 PF02540 NAD synthase Amico_1792 PF00958 GMP synthase C terminal domain Amico_1793 PF01969 Protein of unknown function DUF111 Amico_1794 PF14031 Putative serine dehydratase domain Amico_1794 PF01168 Alanine racemase, N-terminal domain Amico_1795 PF01546 Peptidase family M20/M25/M40 Amico_1795 PF07687 Peptidase dimerisation domain Amico_1799 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1799 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Amico_1800 PF01546 Peptidase family M20/M25/M40 Amico_1801 PF00012 Hsp70 protein Amico_1803 PF02558 Ketopantoate reductase PanE/ApbA Amico_1803 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Amico_1806 PF16868 NMT1-like family Amico_1809 PF00149 Calcineurin-like phosphoesterase Amico_1813 PF08279 HTH domain Amico_1813 PF02829 3H domain Amico_1815 PF00990 Diguanylate cyclase, GGDEF domain Amico_1816 PF01554 MatE Amico_1818 PF04349 Periplasmic glucan biosynthesis protein, MdoG Amico_1820 PF00535 Glycosyl transferase family 2 Amico_1821 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain Amico_1821 PF09297 NADH pyrophosphatase zinc ribbon domain Amico_1821 PF00293 NUDIX domain Amico_1822 PF11871 Domain of unknown function (DUF3391) Amico_1822 PF01966 HD domain Amico_1823 PF08534 Redoxin Amico_1826 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Amico_1827 PF01791 DeoC/LacD family aldolase Amico_1828 PF01546 Peptidase family M20/M25/M40 Amico_1828 PF07687 Peptidase dimerisation domain Amico_1829 PF00701 Dihydrodipicolinate synthetase family Amico_1830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1831 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1831 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Amico_1832 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1833 PF01177 Asp/Glu/Hydantoin racemase Amico_1834 PF01979 Amidohydrolase family Amico_1835 PF01979 Amidohydrolase family Amico_1836 PF09339 IclR helix-turn-helix domain Amico_1836 PF01614 Bacterial transcriptional regulator Amico_1837 PF00266 Aminotransferase class-V Amico_1839 PF00871 Acetokinase family Amico_1840 PF01515 Phosphate acetyl/butaryl transferase Amico_1841 PF01515 Phosphate acetyl/butaryl transferase Amico_1842 PF00871 Acetokinase family Amico_1847 PF02632 BioY family Amico_1848 PF09186 Domain of unknown function (DUF1949) Amico_1848 PF01205 Uncharacterized protein family UPF0029 Amico_1849 PF01230 HIT domain Amico_1851 PF02195 ParB-like nuclease domain Amico_1851 PF17762 HTH domain found in ParB protein Amico_1852 PF13614 AAA domain Amico_1853 PF02527 rRNA small subunit methyltransferase G Amico_1854 PF00565 Staphylococcal nuclease homologue Amico_1859 PF01546 Peptidase family M20/M25/M40 Amico_1859 PF07687 Peptidase dimerisation domain Amico_1860 PF07687 Peptidase dimerisation domain Amico_1860 PF01546 Peptidase family M20/M25/M40 Amico_1861 PF00950 ABC 3 transport family Amico_1862 PF00005 ABC transporter Amico_1863 PF01297 Zinc-uptake complex component A periplasmic Amico_1870 PF00072 Response regulator receiver domain Amico_1870 PF00196 Bacterial regulatory proteins, luxR family Amico_1871 PF07730 Histidine kinase Amico_1871 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_1871 PF13492 GAF domain Amico_1873 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Amico_1873 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Amico_1874 PF00392 Bacterial regulatory proteins, gntR family Amico_1874 PF07729 FCD domain Amico_1876 PF00795 Carbon-nitrogen hydrolase Amico_1877 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1878 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Amico_1879 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Amico_1880 PF00326 Prolyl oligopeptidase family Amico_1882 PF00248 Aldo/keto reductase family Amico_1883 PF01614 Bacterial transcriptional regulator Amico_1883 PF09339 IclR helix-turn-helix domain Amico_1885 PF01979 Amidohydrolase family Amico_1886 PF17391 Urocanase N-terminal domain Amico_1886 PF17392 Urocanase C-terminal domain Amico_1886 PF01175 Urocanase Rossmann-like domain Amico_1889 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1890 PF00005 ABC transporter Amico_1890 PF08402 TOBE domain Amico_1891 PF01869 BadF/BadG/BcrA/BcrD ATPase family Amico_1892 PF03328 HpcH/HpaI aldolase/citrate lyase family Amico_1896 PF00403 Heavy-metal-associated domain Amico_1898 PF07730 Histidine kinase Amico_1898 PF17200 Single Cache domain 2 Amico_1899 PF00196 Bacterial regulatory proteins, luxR family Amico_1899 PF00072 Response regulator receiver domain Amico_1900 PF00464 Serine hydroxymethyltransferase Amico_1902 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Amico_1903 PF07687 Peptidase dimerisation domain Amico_1903 PF01546 Peptidase family M20/M25/M40 Amico_1905 PF00221 Aromatic amino acid lyase Amico_1906 PF03063 Prismane/CO dehydrogenase family Amico_1908 PF02082 Transcriptional regulator Amico_1909 PF00266 Aminotransferase class-V