Amico_0001 PF00308 Bacterial dnaA protein Amico_0001 PF08299 Bacterial dnaA protein helix-turn-helix Amico_0001 PF11638 DnaA N-terminal domain Amico_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Amico_0002 PF02767 DNA polymerase III beta subunit, central domain Amico_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Amico_0003 PF02463 RecF/RecN/SMC N terminal domain Amico_0004 PF01134 Glucose inhibited division protein A Amico_0004 PF13932 GidA associated domain 3 Amico_0005 PF05258 Amico_0005 Amico_0008 PF02588 Amico_0008 Amico_0008 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Amico_0009 PF02569 Pantoate-beta-alanine ligase Amico_0010 PF01118 Semialdehyde dehydrogenase, NAD binding domain Amico_0010 PF02774 Semialdehyde dehydrogenase, dimerisation domain Amico_0011 PF00701 Dihydrodipicolinate synthetase family Amico_0012 PF01113 Dihydrodipicolinate reductase, N-terminus Amico_0012 PF05173 Dihydrodipicolinate reductase, C-terminus Amico_0013 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_0013 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Amico_0013 PF14602 Hexapeptide repeat of succinyl-transferase Amico_0014 PF00696 Amino acid kinase family Amico_0014 PF13840 ACT domain Amico_0015 PF02579 Dinitrogenase iron-molybdenum cofactor Amico_0016 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amico_0016 PF13237 4Fe-4S dicluster domain Amico_0017 PF00037 4Fe-4S binding domain Amico_0017 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amico_0018 PF02579 Dinitrogenase iron-molybdenum cofactor Amico_0019 PF17253 Amico_0019 Amico_0020 PF01475 Ferric uptake regulator family Amico_0021 PF00072 Response regulator receiver domain Amico_0022 PF02633 Creatinine amidohydrolase Amico_0023 PF01979 Amidohydrolase family Amico_0024 PF02811 PHP domain Amico_0024 PF13263 PHP-associated Amico_0026 PF01522 Polysaccharide deacetylase Amico_0027 PF01791 DeoC/LacD family aldolase Amico_0028 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Amico_0028 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Amico_0031 PF00270 DEAD/DEAH box helicase Amico_0031 PF00271 Helicase conserved C-terminal domain Amico_0032 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0033 PF00005 ABC transporter Amico_0034 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Amico_0037 PF00459 Inositol monophosphatase family Amico_0038 PF01895 PhoU domain Amico_0038 PF02690 Amico_0038 Amico_0039 PF02237 Biotin protein ligase C terminal domain Amico_0039 PF03099 Biotin/lipoate A/B protein ligase family Amico_0039 PF08279 HTH domain Amico_0041 PF00005 ABC transporter Amico_0042 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0043 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0044 PF12849 PBP superfamily domain Amico_0045 PF02558 Ketopantoate reductase PanE/ApbA Amico_0045 PF08546 Ketopantoate reductase PanE/ApbA C terminal Amico_0046 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0047 PF00005 ABC transporter Amico_0048 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0049 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amico_0051 PF03061 Thioesterase superfamily Amico_0052 PF04101 Glycosyltransferase family 28 C-terminal domain Amico_0052 PF06925 Amico_0052 Amico_0053 PF01497 Periplasmic binding protein Amico_0054 PF01032 FecCD transport family Amico_0055 PF00005 ABC transporter Amico_0056 PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon Amico_0058 PF00156 Phosphoribosyl transferase domain Amico_0059 PF00122 E1-E2 ATPase Amico_0059 PF00403 Heavy-metal-associated domain Amico_0059 PF00702 haloacid dehalogenase-like hydrolase Amico_0060 PF03773 Amico_0060 Amico_0061 PF13192 Thioredoxin domain Amico_0062 PF01022 Bacterial regulatory protein, arsR family Amico_0063 PF00005 ABC transporter Amico_0064 PF02361 Cobalt transport protein Amico_0066 PF01891 Cobalt uptake substrate-specific transmembrane region Amico_0067 PF10670 Amico_0067 Amico_0068 PF02567 Phenazine biosynthesis-like protein Amico_0069 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amico_0069 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0070 PF00005 ABC transporter Amico_0071 PF00291 Pyridoxal-phosphate dependent enzyme Amico_0072 PF00291 Pyridoxal-phosphate dependent enzyme Amico_0073 PF00155 Aminotransferase class I and II Amico_0074 PF12801 Amico_0074 Amico_0076 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Amico_0077 PF01842 ACT domain Amico_0077 PF03315 Serine dehydratase beta chain Amico_0078 PF03313 Amico_0078 Amico_0080 PF03129 Anticodon binding domain Amico_0080 PF04073 Aminoacyl-tRNA editing domain Amico_0081 PF00639 PPIC-type PPIASE domain Amico_0081 PF13624 SurA N-terminal domain Amico_0083 PF06196 Amico_0083 Amico_0084 PF00474 Sodium:solute symporter family Amico_0085 PF01614 Bacterial transcriptional regulator Amico_0085 PF09339 IclR helix-turn-helix domain Amico_0086 PF02548 Ketopantoate hydroxymethyltransferase Amico_0087 PF02558 Ketopantoate reductase PanE/ApbA Amico_0087 PF08546 Ketopantoate reductase PanE/ApbA C terminal Amico_0088 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_0089 PF04290 Amico_0089 Amico_0090 PF06808 Amico_0090 Amico_0093 PF01134 Glucose inhibited division protein A Amico_0093 PF03486 HI0933-like protein Amico_0094 PF00881 Nitroreductase family Amico_0095 PF01180 Dihydroorotate dehydrogenase Amico_0096 PF00291 Pyridoxal-phosphate dependent enzyme Amico_0097 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_0098 PF00180 Isocitrate/isopropylmalate dehydrogenase Amico_0099 PF00694 Aconitase C-terminal domain Amico_0100 PF00330 Aconitase family (aconitate hydratase) Amico_0101 PF00682 HMGL-like Amico_0101 PF08502 LeuA allosteric (dimerisation) domain Amico_0103 PF10672 S-adenosylmethionine-dependent methyltransferase Amico_0104 PF01464 Transglycosylase SLT domain Amico_0105 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amico_0105 PF10531 SLBB domain Amico_0105 PF13187 4Fe-4S dicluster domain Amico_0105 PF13375 RnfC Barrel sandwich hybrid domain Amico_0106 PF03116 Amico_0106 Amico_0107 PF04205 FMN-binding domain Amico_0108 PF02508 Amico_0108 Amico_0109 PF02508 Amico_0109 Amico_0110 PF00037 4Fe-4S binding domain Amico_0110 PF04060 Putative Fe-S cluster Amico_0110 PF12838 4Fe-4S dicluster domain Amico_0111 PF07456 Amico_0111 Amico_0112 PF07009 Protein of unknown function (DUF1312) Amico_0113 PF02424 ApbE family Amico_0114 PF01235 Amico_0114 Amico_0115 PF03699 Amico_0115 Amico_0116 PF01980 Uncharacterised protein family UPF0066 Amico_0117 PF01042 Endoribonuclease L-PSP Amico_0118 PF03313 Amico_0118 Amico_0119 PF00155 Aminotransferase class I and II Amico_0120 PF00317 Ribonucleotide reductase, all-alpha domain Amico_0120 PF02867 Ribonucleotide reductase, barrel domain Amico_0122 PF09827 CRISPR associated protein Cas2 Amico_0123 PF01867 CRISPR associated protein Cas1 Amico_0123 PF01930 Domain of unknown function DUF83 Amico_0124 PF09704 CRISPR-associated protein (Cas_Cas5) Amico_0127 PF00271 Helicase conserved C-terminal domain Amico_0128 PF09559 Amico_0128 Amico_0130 PF00392 Bacterial regulatory proteins, gntR family Amico_0130 PF07729 FCD domain Amico_0131 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_0132 PF04290 Amico_0132 Amico_0133 PF06808 Amico_0133 Amico_0134 PF05681 Amico_0134 Amico_0135 PF05683 Fumarase C-terminus Amico_0136 PF00206 Lyase Amico_0136 PF10415 Fumarase C C-terminus Amico_0137 PF00390 Malic enzyme, N-terminal domain Amico_0137 PF03949 Malic enzyme, NAD binding domain Amico_0138 PF03972 MmgE/PrpD family Amico_0139 PF08901 Amico_0139 Amico_0140 PF01734 Patatin-like phospholipase Amico_0141 PF01380 SIS domain Amico_0141 PF01418 Helix-turn-helix domain, rpiR family Amico_0142 PF00155 Aminotransferase class I and II Amico_0143 PF03401 Tripartite tricarboxylate transporter family receptor Amico_0144 PF07331 Amico_0144 Amico_0145 PF01970 Amico_0145 Amico_0146 PF00682 HMGL-like Amico_0147 PF00438 S-adenosylmethionine synthetase, N-terminal domain Amico_0147 PF02772 S-adenosylmethionine synthetase, central domain Amico_0147 PF02773 S-adenosylmethionine synthetase, C-terminal domain Amico_0148 PF13360 PQQ-like domain Amico_0149 PF04143 Amico_0149 Amico_0150 PF01206 Sulfurtransferase TusA Amico_0151 PF03060 Nitronate monooxygenase Amico_0152 PF00924 Mechanosensitive ion channel Amico_0153 PF01546 Peptidase family M20/M25/M40 Amico_0155 PF13458 Periplasmic binding protein Amico_0156 PF02653 Amico_0156 Amico_0157 PF02653 Amico_0157 Amico_0158 PF00005 ABC transporter Amico_0158 PF12399 Branched-chain amino acid ATP-binding cassette transporter Amico_0159 PF00005 ABC transporter Amico_0160 PF00155 Aminotransferase class I and II Amico_0161 PF02597 ThiS family Amico_0162 PF02082 Transcriptional regulator Amico_0163 PF00266 Aminotransferase class-V Amico_0164 PF01592 NifU-like N terminal domain Amico_0165 PF00899 ThiF family Amico_0166 PF03352 Methyladenine glycosylase Amico_0167 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Amico_0167 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Amico_0168 PF01545 Cation efflux family Amico_0168 PF16916 Amico_0168 Amico_0169 PF00226 DnaJ domain Amico_0169 PF01556 DnaJ C terminal domain Amico_0170 PF00905 Penicillin binding protein transpeptidase domain Amico_0170 PF00912 Transglycosylase Amico_0170 PF06832 Amico_0170 Amico_0171 PF00207 Alpha-2-macroglobulin family Amico_0171 PF01835 MG2 domain Amico_0171 PF07703 Alpha-2-macroglobulin family N-terminal region Amico_0171 PF11974 Alpha-2-macroglobulin MG1 domain Amico_0172 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0172 PF02861 Clp amino terminal domain Amico_0172 PF07724 AAA domain (Cdc48 subfamily) Amico_0172 PF10431 C-terminal, D2-small domain, of ClpB protein Amico_0173 PF03577 Amico_0173 Amico_0174 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amico_0174 PF13188 PAS domain Amico_0174 PF14501 GHKL domain Amico_0174 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Amico_0175 PF00072 Response regulator receiver domain Amico_0180 PF03577 Amico_0180 Amico_0181 PF07883 Cupin domain Amico_0182 PF07690 Major Facilitator Superfamily Amico_0183 PF00708 Acylphosphatase Amico_0185 PF04055 Radical SAM superfamily Amico_0185 PF12544 Lysine-2,3-aminomutase Amico_0185 PF13394 4Fe-4S single cluster domain Amico_0186 PF00583 Acetyltransferase (GNAT) family Amico_0187 PF07478 D-ala D-ala ligase C-terminus Amico_0188 PF07478 D-ala D-ala ligase C-terminus Amico_0190 PF04454 Encapsulating protein for peroxidase Amico_0192 PF00011 Hsp20/alpha crystallin family Amico_0193 PF01613 Flavin reductase like domain Amico_0194 PF01432 Peptidase family M3 Amico_0194 PF08439 Oligopeptidase F Amico_0195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amico_0195 PF03466 LysR substrate binding domain Amico_0196 PF01546 Peptidase family M20/M25/M40 Amico_0196 PF07687 Peptidase dimerisation domain Amico_0197 PF00464 Serine hydroxymethyltransferase Amico_0198 PF00291 Pyridoxal-phosphate dependent enzyme Amico_0199 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_0200 PF04290 Amico_0200 Amico_0201 PF06808 Amico_0201 Amico_0202 PF07969 Amidohydrolase family Amico_0203 PF01546 Peptidase family M20/M25/M40 Amico_0203 PF07687 Peptidase dimerisation domain Amico_0204 PF00696 Amino acid kinase family Amico_0205 PF07969 Amidohydrolase family Amico_0206 PF07905 Amico_0206 Amico_0206 PF13556 PucR C-terminal helix-turn-helix domain Amico_0208 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_0209 PF04290 Amico_0209 Amico_0210 PF06808 Amico_0210 Amico_0211 PF07969 Amidohydrolase family Amico_0212 PF00842 Alanine racemase, C-terminal domain Amico_0212 PF01168 Alanine racemase, N-terminal domain Amico_0213 PF07690 Major Facilitator Superfamily Amico_0214 PF02421 Ferrous iron transport protein B Amico_0214 PF07664 Amico_0214 Amico_0214 PF07670 Nucleoside recognition Amico_0215 PF04023 FeoA domain Amico_0216 PF04055 Radical SAM superfamily Amico_0217 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_0218 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amico_0219 PF02535 Amico_0219 Amico_0220 PF02659 Amico_0220 Amico_0221 PF08245 Mur ligase middle domain Amico_0222 PF14102 Amico_0222 Amico_0224 PF00072 Response regulator receiver domain Amico_0224 PF09339 IclR helix-turn-helix domain Amico_0225 PF09861 Domain of unknown function (DUF2088) Amico_0226 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amico_0227 PF00155 Aminotransferase class I and II Amico_0228 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Amico_0228 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Amico_0229 PF03553 Amico_0229 Amico_0230 PF01678 Diaminopimelate epimerase Amico_0231 PF13502 Amico_0231 Amico_0232 PF00534 Glycosyl transferases group 1 Amico_0232 PF08323 Starch synthase catalytic domain Amico_0233 PF00343 Carbohydrate phosphorylase Amico_0234 PF02446 4-alpha-glucanotransferase Amico_0235 PF00128 Alpha amylase, catalytic domain Amico_0235 PF02806 Alpha amylase, C-terminal all-beta domain Amico_0235 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Amico_0236 PF03065 Glycosyl hydrolase family 57 Amico_0236 PF12055 Amico_0236 Amico_0237 PF00696 Amino acid kinase family Amico_0237 PF01472 PUA domain Amico_0238 PF00171 Aldehyde dehydrogenase family Amico_0240 PF04474 Amico_0240 Amico_0241 PF02653 Amico_0241 Amico_0242 PF02653 Amico_0242 Amico_0243 PF00005 ABC transporter Amico_0244 PF02608 Basic membrane protein Amico_0245 PF00156 Phosphoribosyl transferase domain Amico_0247 PF01965 DJ-1/PfpI family Amico_0248 PF00534 Glycosyl transferases group 1 Amico_0249 PF00982 Glycosyltransferase family 20 Amico_0250 PF00881 Nitroreductase family Amico_0251 PF00881 Nitroreductase family Amico_0252 PF00521 DNA gyrase/topoisomerase IV, subunit A Amico_0252 PF03989 DNA gyrase C-terminal domain, beta-propeller Amico_0253 PF02666 Amico_0253 Amico_0254 PF01066 CDP-alcohol phosphatidyltransferase Amico_0255 PF08543 Phosphomethylpyrimidine kinase Amico_0256 PF02110 Hydroxyethylthiazole kinase family Amico_0257 PF02581 Thiamine monophosphate synthase/TENI Amico_0258 PF09512 Amico_0258 Amico_0259 PF09084 NMT1/THI5 like Amico_0260 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0261 PF00005 ABC transporter Amico_0262 PF09515 Thiamine transporter protein (Thia_YuaJ) Amico_0264 PF01478 Type IV leader peptidase family Amico_0265 PF00582 Universal stress protein family Amico_0266 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Amico_0267 PF01039 Carboxyl transferase domain Amico_0268 PF04277 Amico_0268 Amico_0269 PF00364 Biotin-requiring enzyme Amico_0270 PF03977 Amico_0270 Amico_0271 PF05145 Amico_0271 Amico_0272 PF03749 Sugar fermentation stimulation protein Amico_0273 PF00582 Universal stress protein family Amico_0274 PF03279 Amico_0274 Amico_0276 PF00654 Voltage gated chloride channel Amico_0277 PF00375 Sodium:dicarboxylate symporter family Amico_0278 PF01734 Patatin-like phospholipase Amico_0279 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amico_0279 PF03129 Anticodon binding domain Amico_0279 PF09180 Prolyl-tRNA synthetase, C-terminal Amico_0280 PF02541 Ppx/GppA phosphatase family Amico_0281 PF02690 Amico_0281 Amico_0282 PF01895 PhoU domain Amico_0283 PF00581 Rhodanese-like domain Amico_0284 PF00881 Nitroreductase family Amico_0287 PF00742 Homoserine dehydrogenase Amico_0287 PF03447 Homoserine dehydrogenase, NAD binding domain Amico_0288 PF12850 Calcineurin-like phosphoesterase superfamily domain Amico_0289 PF02811 PHP domain Amico_0290 PF01212 Beta-eliminating lyase Amico_0291 PF01523 Putative modulator of DNA gyrase Amico_0292 PF01520 N-acetylmuramoyl-L-alanine amidase Amico_0293 PF10646 Amico_0293 Amico_0294 PF01138 3' exoribonuclease family, domain 1 Amico_0294 PF03725 3' exoribonuclease family, domain 2 Amico_0295 PF01725 Ham1 family Amico_0296 PF03840 Preprotein translocase SecG subunit Amico_0297 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Amico_0297 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Amico_0298 PF00572 Ribosomal protein L13 Amico_0299 PF00380 Ribosomal protein S9/S16 Amico_0300 PF00571 CBS domain Amico_0300 PF01769 Divalent cation transporter Amico_0300 PF03448 MgtE intracellular N domain Amico_0301 PF00440 Bacterial regulatory proteins, tetR family Amico_0302 PF02321 Outer membrane efflux protein Amico_0303 PF16576 Amico_0303 Amico_0304 PF00873 AcrB/AcrD/AcrF family Amico_0307 PF08843 Nucleotidyl transferase of unknown function (DUF1814) Amico_0308 PF00196 Bacterial regulatory proteins, luxR family Amico_0311 PF00009 Elongation factor Tu GTP binding domain Amico_0311 PF03143 Elongation factor Tu C-terminal domain Amico_0311 PF03144 Elongation factor Tu domain 2 Amico_0312 PF00471 Ribosomal protein L33 Amico_0313 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Amico_0314 PF00467 KOW motif Amico_0314 PF02357 Transcription termination factor nusG Amico_0315 PF00298 Ribosomal protein L11, RNA binding domain Amico_0315 PF03946 Ribosomal protein L11, N-terminal domain Amico_0316 PF00687 Ribosomal protein L1p/L10e family Amico_0317 PF00466 Ribosomal protein L10 Amico_0318 PF00542 Ribosomal protein L7/L12 C-terminal domain Amico_0318 PF16320 Amico_0318 Amico_0319 PF04493 Endonuclease V Amico_0320 PF04909 Amidohydrolase Amico_0321 PF09962 Amico_0321 Amico_0323 PF03706 Amico_0323 Amico_0323 PF09924 Uncharacterized conserved protein (DUF2156) Amico_0325 PF07613 Amico_0325 Amico_0326 PF02310 B12 binding domain Amico_0326 PF04055 Radical SAM superfamily Amico_0327 PF00892 EamA-like transporter family Amico_0329 PF00730 HhH-GPD superfamily base excision DNA repair protein Amico_0329 PF14815 NUDIX domain Amico_0331 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Amico_0332 PF04126 Cyclophilin-like Amico_0333 PF00593 TonB dependent receptor Amico_0333 PF07715 TonB-dependent Receptor Plug Domain Amico_0334 PF01497 Periplasmic binding protein Amico_0335 PF01032 FecCD transport family Amico_0336 PF00005 ABC transporter Amico_0337 PF03544 Gram-negative bacterial TonB protein C-terminal Amico_0338 PF02472 Biopolymer transport protein ExbD/TolR Amico_0339 PF01618 Amico_0339 Amico_0340 PF00209 Sodium:neurotransmitter symporter family Amico_0341 PF01564 Spermine/spermidine synthase Amico_0341 PF17284 Amico_0341 Amico_0342 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Amico_0342 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Amico_0343 PF00753 Metallo-beta-lactamase superfamily Amico_0344 PF02685 Glucokinase Amico_0345 PF11209 Amico_0345 Amico_0346 PF08241 Methyltransferase domain Amico_0347 PF00005 ABC transporter Amico_0347 PF12848 ABC transporter Amico_0348 PF07690 Major Facilitator Superfamily Amico_0349 PF00313 'Cold-shock' DNA-binding domain Amico_0350 PF00270 DEAD/DEAH box helicase Amico_0350 PF00271 Helicase conserved C-terminal domain Amico_0350 PF03880 DbpA RNA binding domain Amico_0351 PF16576 Amico_0351 Amico_0352 PF00873 AcrB/AcrD/AcrF family Amico_0353 PF01464 Transglycosylase SLT domain Amico_0354 PF00892 EamA-like transporter family Amico_0355 PF05651 Amico_0355 Amico_0355 PF13556 PucR C-terminal helix-turn-helix domain Amico_0357 PF12683 Protein of unknown function (DUF3798) Amico_0358 PF00005 ABC transporter Amico_0359 PF02653 Amico_0359 Amico_0360 PF02653 Amico_0360 Amico_0362 PF00881 Nitroreductase family Amico_0363 PF01926 50S ribosome-binding GTPase Amico_0363 PF10396 GTP-binding protein TrmE N-terminus Amico_0363 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE Amico_0364 PF00155 Aminotransferase class I and II Amico_0365 PF01435 Peptidase family M48 Amico_0366 PF01464 Transglycosylase SLT domain Amico_0367 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0367 PF02359 Cell division protein 48 (CDC48), N-terminal domain Amico_0367 PF02933 Cell division protein 48 (CDC48), domain 2 Amico_0368 PF00155 Aminotransferase class I and II Amico_0369 PF01676 Metalloenzyme superfamily Amico_0369 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Amico_0370 PF01966 HD domain Amico_0371 PF00849 RNA pseudouridylate synthase Amico_0374 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Amico_0374 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Amico_0375 PF00152 tRNA synthetases class II (D, K and N) Amico_0375 PF01336 OB-fold nucleic acid binding domain Amico_0376 PF00501 AMP-binding enzyme Amico_0376 PF13193 AMP-binding enzyme C-terminal domain Amico_0377 PF00294 pfkB family carbohydrate kinase Amico_0380 PF00155 Aminotransferase class I and II Amico_0380 PF00392 Bacterial regulatory proteins, gntR family Amico_0382 PF00392 Bacterial regulatory proteins, gntR family Amico_0382 PF07729 FCD domain Amico_0383 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Amico_0384 PF04298 Amico_0384 Amico_0386 PF01029 NusB family Amico_0386 PF01189 NOL1/NOP2/sun family Amico_0387 PF03793 PASTA domain Amico_0388 PF00834 Ribulose-phosphate 3 epimerase family Amico_0389 PF13413 Helix-turn-helix domain Amico_0389 PF13464 Amico_0389 Amico_0390 PF00919 Uncharacterized protein family UPF0004 Amico_0390 PF04055 Radical SAM superfamily Amico_0391 PF04608 Phosphatidylglycerophosphatase A Amico_0392 PF00994 Probable molybdopterin binding domain Amico_0392 PF02464 Competence-damaged protein Amico_0393 PF13563 2'-5' RNA ligase superfamily Amico_0394 PF00154 recA bacterial DNA recombination protein Amico_0395 PF02146 Sir2 family Amico_0396 PF00860 Permease family Amico_0397 PF16576 Amico_0397 Amico_0398 PF00873 AcrB/AcrD/AcrF family Amico_0399 PF01880 Desulfoferrodoxin Amico_0399 PF06397 Desulfoferrodoxin, N-terminal domain Amico_0400 PF00210 Ferritin-like domain Amico_0401 PF01613 Flavin reductase like domain Amico_0402 PF00258 Flavodoxin Amico_0402 PF00753 Metallo-beta-lactamase superfamily Amico_0403 PF09674 Amico_0403 Amico_0405 PF11700 Amico_0405 Amico_0406 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Amico_0408 PF00072 Response regulator receiver domain Amico_0408 PF00196 Bacterial regulatory proteins, luxR family Amico_0409 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_0409 PF07730 Histidine kinase Amico_0410 PF00753 Metallo-beta-lactamase superfamily Amico_0410 PF07521 RNA-metabolising metallo-beta-lactamase Amico_0410 PF10996 Beta-Casp domain Amico_0412 PF00579 tRNA synthetases class I (W and Y) Amico_0412 PF01479 S4 domain Amico_0413 PF03279 Amico_0413 Amico_0415 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0416 PF00005 ABC transporter Amico_0418 PF00753 Metallo-beta-lactamase superfamily Amico_0419 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Amico_0419 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Amico_0419 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Amico_0419 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Amico_0420 PF03547 Amico_0420 Amico_0421 PF07907 Amico_0421 Amico_0422 PF00392 Bacterial regulatory proteins, gntR family Amico_0422 PF07729 FCD domain Amico_0423 PF00485 Phosphoribulokinase / Uridine kinase family Amico_0424 PF00356 Bacterial regulatory proteins, lacI family Amico_0426 PF10609 ParA/MinD ATPase like Amico_0427 PF00753 Metallo-beta-lactamase superfamily Amico_0428 PF13598 Amico_0428 Amico_0429 PF01926 50S ribosome-binding GTPase Amico_0429 PF06071 Protein of unknown function (DUF933) Amico_0431 PF04366 Amico_0431 Amico_0433 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_0434 PF01226 Formate/nitrite transporter Amico_0435 PF13419 Haloacid dehalogenase-like hydrolase Amico_0436 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0436 PF12002 MgsA AAA+ ATPase C terminal Amico_0436 PF16193 Amico_0436 Amico_0437 PF00392 Bacterial regulatory proteins, gntR family Amico_0437 PF07729 FCD domain Amico_0438 PF01923 Cobalamin adenosyltransferase Amico_0439 PF01614 Bacterial transcriptional regulator Amico_0439 PF09339 IclR helix-turn-helix domain Amico_0440 PF13714 Phosphoenolpyruvate phosphomutase Amico_0441 PF03737 Demethylmenaquinone methyltransferase Amico_0442 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Amico_0442 PF09130 Domain of unknown function (DUF1932) Amico_0443 PF16868 Amico_0443 Amico_0444 PF06808 Amico_0444 Amico_0445 PF06857 Amico_0445 Amico_0446 PF03328 HpcH/HpaI aldolase/citrate lyase family Amico_0447 PF04223 Citrate lyase, alpha subunit (CitF) Amico_0448 PF01420 Type I restriction modification DNA specificity domain Amico_0449 PF02384 N-6 DNA Methylase Amico_0449 PF12161 HsdM N-terminal domain Amico_0450 PF01420 Type I restriction modification DNA specificity domain Amico_0451 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Amico_0451 PF04851 Type III restriction enzyme, res subunit Amico_0451 PF11867 Amico_0451 Amico_0454 PF00795 Carbon-nitrogen hydrolase Amico_0455 PF00392 Bacterial regulatory proteins, gntR family Amico_0455 PF07729 FCD domain Amico_0456 PF01208 Uroporphyrinogen decarboxylase (URO-D) Amico_0457 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_0458 PF04290 Amico_0458 Amico_0459 PF06808 Amico_0459 Amico_0461 PF01053 Cys/Met metabolism PLP-dependent enzyme Amico_0462 PF00122 E1-E2 ATPase Amico_0462 PF00689 Cation transporting ATPase, C-terminus Amico_0462 PF00690 Cation transporter/ATPase, N-terminus Amico_0462 PF00702 haloacid dehalogenase-like hydrolase Amico_0463 PF01569 PAP2 superfamily Amico_0463 PF09335 Amico_0463 Amico_0463 PF14067 Amico_0463 Amico_0464 PF00005 ABC transporter Amico_0465 PF00005 ABC transporter Amico_0465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_0466 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0467 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0468 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amico_0469 PF08241 Methyltransferase domain Amico_0472 PF01641 SelR domain Amico_0473 PF00106 short chain dehydrogenase Amico_0477 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Amico_0477 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Amico_0478 PF00924 Mechanosensitive ion channel Amico_0480 PF00892 EamA-like transporter family Amico_0482 PF03734 L,D-transpeptidase catalytic domain Amico_0483 PF03483 B3/4 domain Amico_0485 PF07883 Cupin domain Amico_0486 PF02321 Outer membrane efflux protein Amico_0487 PF16576 Amico_0487 Amico_0488 PF00005 ABC transporter Amico_0489 PF02687 Amico_0489 Amico_0489 PF12704 MacB-like periplasmic core domain Amico_0491 PF00742 Homoserine dehydrogenase Amico_0491 PF03447 Homoserine dehydrogenase, NAD binding domain Amico_0493 PF00210 Ferritin-like domain Amico_0494 PF00313 'Cold-shock' DNA-binding domain Amico_0495 PF00149 Calcineurin-like phosphoesterase Amico_0496 PF02682 Allophanate hydrolase subunit 1 Amico_0497 PF02626 Allophanate hydrolase subunit 2 Amico_0498 PF03746 LamB/YcsF family Amico_0499 PF07286 Protein of unknown function (DUF1445) Amico_0500 PF00596 Class II Aldolase and Adducin N-terminal domain Amico_0502 PF01177 Asp/Glu/Hydantoin racemase Amico_0504 PF02589 Uncharacterised ACR, YkgG family COG1556 Amico_0506 PF06808 Amico_0506 Amico_0507 PF16868 Amico_0507 Amico_0511 PF00392 Bacterial regulatory proteins, gntR family Amico_0511 PF07729 FCD domain Amico_0512 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amico_0512 PF17147 Amico_0512 Amico_0513 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amico_0514 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amico_0515 PF00549 CoA-ligase Amico_0515 PF08442 ATP-grasp domain Amico_0516 PF02629 CoA binding domain Amico_0516 PF13607 Succinyl-CoA ligase like flavodoxin domain Amico_0517 PF12838 4Fe-4S dicluster domain Amico_0518 PF00155 Aminotransferase class I and II Amico_0519 PF00742 Homoserine dehydrogenase Amico_0519 PF03447 Homoserine dehydrogenase, NAD binding domain Amico_0521 PF04143 Amico_0521 Amico_0522 PF00892 EamA-like transporter family Amico_0523 PF01042 Endoribonuclease L-PSP Amico_0524 PF03601 Amico_0524 Amico_0525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amico_0525 PF03466 LysR substrate binding domain Amico_0526 PF00291 Pyridoxal-phosphate dependent enzyme Amico_0528 PF00501 AMP-binding enzyme Amico_0528 PF14535 AMP-binding enzyme C-terminal domain Amico_0530 PF05958 tRNA (Uracil-5-)-methyltransferase Amico_0532 PF01966 HD domain Amico_0532 PF08447 PAS fold Amico_0532 PF13426 PAS domain Amico_0534 PF01966 HD domain Amico_0534 PF04392 ABC transporter substrate binding protein Amico_0534 PF13188 PAS domain Amico_0535 PF00575 S1 RNA binding domain Amico_0535 PF09371 Tex-like protein N-terminal domain Amico_0535 PF12836 Helix-hairpin-helix motif Amico_0535 PF16921 Amico_0535 Amico_0536 PF00149 Calcineurin-like phosphoesterase Amico_0537 PF04232 Stage V sporulation protein S (SpoVS) Amico_0538 PF03129 Anticodon binding domain Amico_0538 PF13393 Histidyl-tRNA synthetase Amico_0539 PF00152 tRNA synthetases class II (D, K and N) Amico_0539 PF01336 OB-fold nucleic acid binding domain Amico_0539 PF02938 GAD domain Amico_0540 PF13483 Beta-lactamase superfamily domain Amico_0541 PF01380 SIS domain Amico_0541 PF01418 Helix-turn-helix domain, rpiR family Amico_0542 PF04055 Radical SAM superfamily Amico_0542 PF16199 Amico_0542 Amico_0543 PF01381 Helix-turn-helix Amico_0544 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Amico_0544 PF03466 LysR substrate binding domain Amico_0545 PF04073 Aminoacyl-tRNA editing domain Amico_0546 PF03479 Domain of unknown function (DUF296) Amico_0548 PF00710 Asparaginase Amico_0549 PF02589 Uncharacterised ACR, YkgG family COG1556 Amico_0550 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Amico_0551 PF00448 SRP54-type protein, GTPase domain Amico_0551 PF02881 SRP54-type protein, helical bundle domain Amico_0551 PF02978 Signal peptide binding domain Amico_0552 PF00886 Ribosomal protein S16 Amico_0553 PF13083 KH domain Amico_0554 PF01782 RimM N-terminal domain Amico_0555 PF01746 tRNA (Guanine-1)-methyltransferase Amico_0555 PF09936 SAM-dependent RNA methyltransferase Amico_0556 PF01245 Ribosomal protein L19 Amico_0558 PF01676 Metalloenzyme superfamily Amico_0558 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Amico_0559 PF01927 Amico_0559 Amico_0559 PF14451 Amico_0559 Amico_0560 PF13549 ATP-grasp domain Amico_0560 PF13607 Succinyl-CoA ligase like flavodoxin domain Amico_0561 PF02660 Amico_0561 Amico_0562 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) Amico_0563 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0563 PF02151 UvrB/uvrC motif Amico_0563 PF02861 Clp amino terminal domain Amico_0563 PF07724 AAA domain (Cdc48 subfamily) Amico_0563 PF10431 C-terminal, D2-small domain, of ClpB protein Amico_0564 PF01972 Serine dehydrogenase proteinase Amico_0566 PF00924 Mechanosensitive ion channel Amico_0567 PF00395 S-layer homology domain Amico_0567 PF05036 Sporulation related domain Amico_0567 PF09992 Predicted periplasmic protein (DUF2233) Amico_0568 PF02675 S-adenosylmethionine decarboxylase Amico_0570 PF00209 Sodium:neurotransmitter symporter family Amico_0571 PF01116 Fructose-bisphosphate aldolase class-II Amico_0572 PF00291 Pyridoxal-phosphate dependent enzyme Amico_0573 PF00288 GHMP kinases N terminal domain Amico_0575 PF03968 OstA-like protein Amico_0576 PF00005 ABC transporter Amico_0577 PF01750 Hydrogenase maturation protease Amico_0578 PF03023 Amico_0578 Amico_0580 PF00814 Glycoprotease family Amico_0581 PF00166 Chaperonin 10 Kd subunit Amico_0582 PF00118 TCP-1/cpn60 chaperonin family Amico_0583 PF00117 Glutamine amidotransferase class-I Amico_0583 PF00958 GMP synthase C terminal domain Amico_0583 PF02540 NAD synthase Amico_0584 PF01594 Amico_0584 Amico_0585 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Amico_0586 PF03030 Inorganic H+ pyrophosphatase Amico_0587 PF01807 CHC2 zinc finger Amico_0587 PF08275 DNA primase catalytic core, N-terminal domain Amico_0587 PF13662 Toprim domain Amico_0588 PF01479 S4 domain Amico_0589 PF00113 Enolase, C-terminal TIM barrel domain Amico_0589 PF03952 Enolase, N-terminal domain Amico_0590 PF02629 CoA binding domain Amico_0590 PF06971 Putative DNA-binding protein N-terminus Amico_0591 PF02699 Preprotein translocase subunit Amico_0592 PF02355 Protein export membrane protein Amico_0592 PF07549 SecD/SecF GG Motif Amico_0593 PF02355 Protein export membrane protein Amico_0593 PF07549 SecD/SecF GG Motif Amico_0594 PF04055 Radical SAM superfamily Amico_0594 PF13186 Iron-sulfur cluster-binding domain Amico_0594 PF13353 4Fe-4S single cluster domain Amico_0595 PF06305 Amico_0595 Amico_0596 PF01368 DHH family Amico_0596 PF02272 DHHA1 domain Amico_0597 PF02824 TGS domain Amico_0597 PF04607 Region found in RelA / SpoT proteins Amico_0597 PF13291 ACT domain Amico_0597 PF13328 HD domain Amico_0598 PF02580 D-Tyr-tRNA(Tyr) deacylase Amico_0599 PF00753 Metallo-beta-lactamase superfamily Amico_0600 PF04002 RadC-like JAB domain Amico_0601 PF06723 MreB/Mbl protein Amico_0602 PF04085 rod shape-determining protein MreC Amico_0603 PF04093 Amico_0603 Amico_0604 PF00905 Penicillin binding protein transpeptidase domain Amico_0604 PF03717 Penicillin-binding Protein dimerisation domain Amico_0605 PF03775 Septum formation inhibitor MinC, C-terminal domain Amico_0606 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Amico_0607 PF03776 Septum formation topological specificity factor MinE Amico_0608 PF01098 Amico_0608 Amico_0609 PF04055 Radical SAM superfamily Amico_0610 PF10105 Amico_0610 Amico_0611 PF10150 Ribonuclease E/G family Amico_0612 PF02463 RecF/RecN/SMC N terminal domain Amico_0612 PF06470 SMC proteins Flexible Hinge Domain Amico_0613 PF13847 Methyltransferase domain Amico_0614 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Amico_0615 PF01588 Putative tRNA binding domain Amico_0615 PF08264 Anticodon-binding domain of tRNA Amico_0615 PF09334 tRNA synthetases class I (M) Amico_0616 PF01026 TatD related DNase Amico_0617 PF01702 Queuine tRNA-ribosyltransferase Amico_0618 PF01300 Telomere recombination Amico_0618 PF03481 Putative GTP-binding controlling metal-binding Amico_0619 PF00562 RNA polymerase Rpb2, domain 6 Amico_0619 PF04560 RNA polymerase Rpb2, domain 7 Amico_0619 PF04561 RNA polymerase Rpb2, domain 2 Amico_0619 PF04563 RNA polymerase beta subunit Amico_0619 PF04565 RNA polymerase Rpb2, domain 3 Amico_0619 PF10385 RNA polymerase beta subunit external 1 domain Amico_0620 PF00623 RNA polymerase Rpb1, domain 2 Amico_0620 PF04983 RNA polymerase Rpb1, domain 3 Amico_0620 PF04997 RNA polymerase Rpb1, domain 1 Amico_0620 PF04998 RNA polymerase Rpb1, domain 5 Amico_0620 PF05000 RNA polymerase Rpb1, domain 4 Amico_0621 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Amico_0622 PF00164 Ribosomal protein S12/S23 Amico_0623 PF00177 Ribosomal protein S7p/S5e Amico_0624 PF00009 Elongation factor Tu GTP binding domain Amico_0624 PF00679 Elongation factor G C-terminus Amico_0624 PF03144 Elongation factor Tu domain 2 Amico_0624 PF03764 Elongation factor G, domain IV Amico_0624 PF14492 Elongation Factor G, domain II Amico_0625 PF00009 Elongation factor Tu GTP binding domain Amico_0625 PF03143 Elongation factor Tu C-terminal domain Amico_0625 PF03144 Elongation factor Tu domain 2 Amico_0626 PF00338 Ribosomal protein S10p/S20e Amico_0627 PF00297 Ribosomal protein L3 Amico_0628 PF00573 Ribosomal protein L4/L1 family Amico_0629 PF00276 Ribosomal protein L23 Amico_0630 PF00181 Ribosomal Proteins L2, RNA binding domain Amico_0630 PF03947 Ribosomal Proteins L2, C-terminal domain Amico_0631 PF00203 Ribosomal protein S19 Amico_0632 PF00237 Ribosomal protein L22p/L17e Amico_0633 PF00189 Ribosomal protein S3, C-terminal domain Amico_0633 PF07650 KH domain Amico_0634 PF00252 Ribosomal protein L16p/L10e Amico_0635 PF00831 Ribosomal L29 protein Amico_0636 PF00366 Ribosomal protein S17 Amico_0637 PF00238 Ribosomal protein L14p/L23e Amico_0638 PF00467 KOW motif Amico_0638 PF17136 Amico_0638 Amico_0639 PF00281 Ribosomal protein L5 Amico_0639 PF00673 ribosomal L5P family C-terminus Amico_0640 PF00253 Ribosomal protein S14p/S29e Amico_0641 PF00410 Ribosomal protein S8 Amico_0642 PF00347 Ribosomal protein L6 Amico_0643 PF00861 Ribosomal L18p/L5e family Amico_0644 PF00333 Ribosomal protein S5, N-terminal domain Amico_0644 PF03719 Ribosomal protein S5, C-terminal domain Amico_0645 PF00327 Ribosomal protein L30p/L7e Amico_0646 PF00828 Ribosomal protein L18e/L15 Amico_0647 PF00344 SecY translocase Amico_0648 PF00406 Adenylate kinase Amico_0648 PF05191 Adenylate kinase, active site lid Amico_0649 PF00557 Metallopeptidase family M24 Amico_0651 PF01176 Translation initiation factor 1A / IF-1 Amico_0652 PF00444 Ribosomal protein L36 Amico_0653 PF00416 Ribosomal protein S13/S18 Amico_0654 PF00411 Ribosomal protein S11 Amico_0655 PF00163 Ribosomal protein S4/S9 N-terminal domain Amico_0655 PF01479 S4 domain Amico_0656 PF01000 RNA polymerase Rpb3/RpoA insert domain Amico_0656 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Amico_0656 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Amico_0657 PF01196 Ribosomal protein L17 Amico_0658 PF00005 ABC transporter Amico_0659 PF00005 ABC transporter Amico_0660 PF02361 Cobalt transport protein Amico_0661 PF01416 tRNA pseudouridine synthase Amico_0662 PF06723 MreB/Mbl protein Amico_0663 PF03692 Amico_0663 Amico_0665 PF11283 Amico_0665 Amico_0667 PF00583 Acetyltransferase (GNAT) family Amico_0669 PF03938 Outer membrane protein (OmpH-like) Amico_0670 PF08282 haloacid dehalogenase-like hydrolase Amico_0671 PF04008 Adenosine specific kinase Amico_0672 PF07085 DRTGG domain Amico_0674 PF02906 Iron only hydrogenase large subunit, C-terminal domain Amico_0674 PF04060 Putative Fe-S cluster Amico_0676 PF02811 PHP domain Amico_0677 PF01502 Phosphoribosyl-AMP cyclohydrolase Amico_0677 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Amico_0678 PF00977 Histidine biosynthesis protein Amico_0679 PF00977 Histidine biosynthesis protein Amico_0680 PF00117 Glutamine amidotransferase class-I Amico_0681 PF00475 Imidazoleglycerol-phosphate dehydratase Amico_0682 PF01634 ATP phosphoribosyltransferase Amico_0683 PF13393 Histidyl-tRNA synthetase Amico_0684 PF00815 Histidinol dehydrogenase Amico_0685 PF05362 Lon protease (S16) C-terminal proteolytic domain Amico_0685 PF13481 AAA domain Amico_0686 PF00574 Clp protease Amico_0686 PF01957 NfeD-like C-terminal, partner-binding Amico_0687 PF01145 SPFH domain / Band 7 family Amico_0688 PF00133 tRNA synthetases class I (I, L, M and V) Amico_0688 PF08264 Anticodon-binding domain of tRNA Amico_0688 PF09334 tRNA synthetases class I (M) Amico_0688 PF13603 Leucyl-tRNA synthetase, Domain 2 Amico_0690 PF01649 Ribosomal protein S20 Amico_0691 PF04851 Type III restriction enzyme, res subunit Amico_0691 PF13307 Helicase C-terminal domain Amico_0692 PF00825 Ribonuclease P Amico_0693 PF01809 Amico_0693 Amico_0694 PF02096 60Kd inner membrane protein Amico_0695 PF01424 R3H domain Amico_0695 PF13083 KH domain Amico_0695 PF14804 Jag N-terminus Amico_0696 PF01790 Amico_0696 Amico_0697 PF00595 PDZ domain (Also known as DHR or GLGF) Amico_0697 PF13180 PDZ domain Amico_0697 PF13365 Trypsin-like peptidase domain Amico_0698 PF00512 His Kinase A (phospho-acceptor) domain Amico_0698 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_0699 PF00072 Response regulator receiver domain Amico_0699 PF00486 Transcriptional regulatory protein, C terminal Amico_0700 PF00312 Ribosomal protein S15 Amico_0701 PF00013 KH domain Amico_0701 PF00575 S1 RNA binding domain Amico_0701 PF01138 3' exoribonuclease family, domain 1 Amico_0701 PF03725 3' exoribonuclease family, domain 2 Amico_0701 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Amico_0702 PF00692 dUTPase Amico_0703 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amico_0703 PF03129 Anticodon binding domain Amico_0703 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Amico_0704 PF00707 Translation initiation factor IF-3, C-terminal domain Amico_0704 PF05198 Translation initiation factor IF-3, N-terminal domain Amico_0705 PF01632 Ribosomal protein L35 Amico_0706 PF00453 Ribosomal protein L20 Amico_0707 PF02386 Cation transport protein Amico_0708 PF02080 TrkA-C domain Amico_0708 PF02254 TrkA-N domain Amico_0709 PF01409 tRNA synthetases class II core domain (F) Amico_0709 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Amico_0710 PF01588 Putative tRNA binding domain Amico_0710 PF03147 Ferredoxin-fold anticodon binding domain Amico_0710 PF03483 B3/4 domain Amico_0710 PF03484 tRNA synthetase B5 domain Amico_0712 PF05164 Cell division protein ZapA Amico_0713 PF02674 Amico_0713 Amico_0714 PF00488 MutS domain V Amico_0714 PF01713 Smr domain Amico_0715 PF02971 Formiminotransferase domain Amico_0715 PF07837 Formiminotransferase domain, N-terminal subdomain Amico_0716 PF01614 Bacterial transcriptional regulator Amico_0716 PF09339 IclR helix-turn-helix domain Amico_0718 PF00474 Sodium:solute symporter family Amico_0720 PF16868 Amico_0720 Amico_0721 PF09021 HutP Amico_0722 PF01197 Ribosomal protein L31 Amico_0723 PF02511 Thymidylate synthase complementing protein Amico_0724 PF07136 Amico_0724 Amico_0725 PF00472 RF-1 domain Amico_0725 PF03462 PCRF domain Amico_0726 PF05175 Methyltransferase small domain Amico_0727 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_0728 PF00294 pfkB family carbohydrate kinase Amico_0729 PF00571 CBS domain Amico_0730 PF01435 Peptidase family M48 Amico_0731 PF13177 DNA polymerase III, delta subunit Amico_0732 PF02811 PHP domain Amico_0732 PF07733 Bacterial DNA polymerase III alpha subunit Amico_0732 PF14579 Helix-hairpin-helix motif Amico_0733 PF00224 Pyruvate kinase, barrel domain Amico_0733 PF00391 PEP-utilising enzyme, mobile domain Amico_0733 PF02887 Pyruvate kinase, alpha/beta domain Amico_0734 PF00293 NUDIX domain Amico_0735 PF01261 Xylose isomerase-like TIM barrel Amico_0736 PF01168 Alanine racemase, N-terminal domain Amico_0737 PF02457 DisA bacterial checkpoint controller nucleotide-binding Amico_0738 PF07949 YbbR-like protein Amico_0739 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Amico_0739 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Amico_0739 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Amico_0739 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Amico_0740 PF00483 Nucleotidyl transferase Amico_0741 PF01380 SIS domain Amico_0741 PF13522 Glutamine amidotransferase domain Amico_0743 PF01979 Amidohydrolase family Amico_0743 PF13382 Adenine deaminase C-terminal domain Amico_0745 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_0745 PF12804 MobA-like NTP transferase domain Amico_0745 PF14602 Hexapeptide repeat of succinyl-transferase Amico_0746 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Amico_0746 PF14572 Phosphoribosyl synthetase-associated domain Amico_0747 PF01386 Ribosomal L25p family Amico_0747 PF14693 Ribosomal protein TL5, C-terminal domain Amico_0748 PF01195 Peptidyl-tRNA hydrolase Amico_0749 PF00270 DEAD/DEAH box helicase Amico_0749 PF00271 Helicase conserved C-terminal domain Amico_0749 PF02559 CarD-like/TRCF domain Amico_0749 PF03461 TRCF domain Amico_0750 PF03819 MazG nucleotide pyrophosphohydrolase domain Amico_0751 PF00682 HMGL-like Amico_0751 PF02436 Conserved carboxylase domain Amico_0752 PF02562 PhoH-like protein Amico_0753 PF01966 HD domain Amico_0753 PF07697 Amico_0753 Amico_0754 PF02130 Uncharacterized protein family UPF0054 Amico_0755 PF00571 CBS domain Amico_0755 PF01595 Amico_0755 Amico_0755 PF03471 Transporter associated domain Amico_0756 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Amico_0757 PF01926 50S ribosome-binding GTPase Amico_0757 PF07650 KH domain Amico_0758 PF02565 Recombination protein O C terminal Amico_0758 PF11967 Recombination protein O N terminal Amico_0759 PF02091 Glycyl-tRNA synthetase alpha subunit Amico_0760 PF02092 Amico_0760 Amico_0760 PF05746 DALR anticodon binding domain Amico_0761 PF03618 Amico_0761 Amico_0762 PF03618 Amico_0762 Amico_0763 PF00391 PEP-utilising enzyme, mobile domain Amico_0763 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Amico_0763 PF02896 PEP-utilising enzyme, TIM barrel domain Amico_0764 PF00391 PEP-utilising enzyme, mobile domain Amico_0764 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Amico_0764 PF02896 PEP-utilising enzyme, TIM barrel domain Amico_0765 PF00905 Penicillin binding protein transpeptidase domain Amico_0765 PF00912 Transglycosylase Amico_0766 PF00437 Type II/IV secretion system protein Amico_0767 PF00482 Type II secretion system (T2SS), protein F Amico_0768 PF07963 Prokaryotic N-terminal methylation motif Amico_0776 PF00263 Amico_0776 Amico_0777 PF01171 PP-loop family Amico_0778 PF00156 Phosphoribosyl transferase domain Amico_0779 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0779 PF01434 Peptidase family M41 Amico_0779 PF06480 FtsH Extracellular Amico_0780 PF00271 Helicase conserved C-terminal domain Amico_0780 PF02151 UvrB/uvrC motif Amico_0780 PF04851 Type III restriction enzyme, res subunit Amico_0780 PF12344 Ultra-violet resistance protein B Amico_0781 PF00005 ABC transporter Amico_0782 PF00588 SpoU rRNA Methylase family Amico_0782 PF08032 RNA 2'-O ribose methyltransferase substrate binding Amico_0783 PF03807 NADP oxidoreductase coenzyme F420-dependent Amico_0783 PF14748 Pyrroline-5-carboxylate reductase dimerisation Amico_0784 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0785 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0785 PF12911 Amico_0785 Amico_0786 PF00005 ABC transporter Amico_0786 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_0787 PF00005 ABC transporter Amico_0787 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_0788 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amico_0789 PF00144 Beta-lactamase Amico_0790 PF01648 4'-phosphopantetheinyl transferase superfamily Amico_0791 PF01256 Carbohydrate kinase Amico_0791 PF03853 YjeF-related protein N-terminus Amico_0792 PF02367 Uncharacterised P-loop hydrolase UPF0079 Amico_0793 PF00814 Glycoprotease family Amico_0794 PF13237 4Fe-4S dicluster domain Amico_0795 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amico_0795 PF17147 Amico_0795 Amico_0796 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amico_0797 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amico_0799 PF00999 Sodium/hydrogen exchanger family Amico_0800 PF01938 TRAM domain Amico_0800 PF05958 tRNA (Uracil-5-)-methyltransferase Amico_0802 PF01496 V-type ATPase 116kDa subunit family Amico_0803 PF00137 ATP synthase subunit C Amico_0804 PF01991 ATP synthase (E/31 kDa) subunit Amico_0805 PF01992 ATP synthase (C/AC39) subunit Amico_0806 PF01990 ATP synthase (F/14-kDa) subunit Amico_0807 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amico_0807 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amico_0807 PF16886 Amico_0807 Amico_0808 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amico_0808 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amico_0809 PF01813 ATP synthase subunit D Amico_0810 PF02381 MraZ protein Amico_0811 PF01795 MraW methylase family Amico_0813 PF00905 Penicillin binding protein transpeptidase domain Amico_0813 PF03717 Penicillin-binding Protein dimerisation domain Amico_0814 PF01225 Mur ligase family, catalytic domain Amico_0814 PF02875 Mur ligase family, glutamate ligase domain Amico_0814 PF08245 Mur ligase middle domain Amico_0815 PF01225 Mur ligase family, catalytic domain Amico_0815 PF02875 Mur ligase family, glutamate ligase domain Amico_0815 PF08245 Mur ligase middle domain Amico_0816 PF00953 Glycosyl transferase family 4 Amico_0816 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Amico_0817 PF02875 Mur ligase family, glutamate ligase domain Amico_0817 PF08245 Mur ligase middle domain Amico_0818 PF01098 Amico_0818 Amico_0819 PF03033 Glycosyltransferase family 28 N-terminal domain Amico_0819 PF04101 Glycosyltransferase family 28 C-terminal domain Amico_0820 PF01225 Mur ligase family, catalytic domain Amico_0820 PF02875 Mur ligase family, glutamate ligase domain Amico_0820 PF08245 Mur ligase middle domain Amico_0821 PF01565 FAD binding domain Amico_0821 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Amico_0823 PF02491 SHS2 domain inserted in FTSA Amico_0823 PF14450 Cell division protein FtsA Amico_0824 PF00091 Tubulin/FtsZ family, GTPase domain Amico_0824 PF12327 FtsZ family, C-terminal domain Amico_0825 PF05036 Sporulation related domain Amico_0826 PF00994 Probable molybdopterin binding domain Amico_0826 PF03453 MoeA N-terminal region (domain I and II) Amico_0826 PF03454 MoeA C-terminal region (domain IV) Amico_0827 PF00994 Probable molybdopterin binding domain Amico_0827 PF03453 MoeA N-terminal region (domain I and II) Amico_0827 PF03454 MoeA C-terminal region (domain IV) Amico_0827 PF12727 PBP superfamily domain Amico_0828 PF04055 Radical SAM superfamily Amico_0828 PF06463 Molybdenum Cofactor Synthesis C Amico_0828 PF13353 4Fe-4S single cluster domain Amico_0829 PF01967 MoaC family Amico_0830 PF00994 Probable molybdopterin binding domain Amico_0831 PF03668 Amico_0831 Amico_0832 PF01933 Uncharacterised protein family UPF0052 Amico_0833 PF02650 WhiA C-terminal HTH domain Amico_0833 PF14527 WhiA LAGLIDADG-like domain Amico_0834 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Amico_0834 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Amico_0835 PF00162 Phosphoglycerate kinase Amico_0836 PF00121 Triosephosphate isomerase Amico_0839 PF10670 Amico_0839 Amico_0840 PF02410 Oligomerisation domain Amico_0841 PF03816 Cell envelope-related transcriptional attenuator domain Amico_0841 PF13399 LytR cell envelope-related transcriptional attenuator Amico_0842 PF01467 Cytidylyltransferase Amico_0843 PF01018 GTP1/OBG Amico_0843 PF01926 50S ribosome-binding GTPase Amico_0843 PF09269 Domain of unknown function (DUF1967) Amico_0844 PF01016 Ribosomal L27 protein Amico_0845 PF04327 Protein of unknown function (DUF464) Amico_0846 PF00829 Ribosomal prokaryotic L21 protein Amico_0847 PF02463 RecF/RecN/SMC N terminal domain Amico_0848 PF01513 ATP-NAD kinase Amico_0849 PF01479 S4 domain Amico_0849 PF01728 FtsJ-like methyltransferase Amico_0850 PF02779 Transketolase, pyrimidine binding domain Amico_0850 PF02780 Transketolase, C-terminal domain Amico_0850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Amico_0851 PF00348 Polyprenyl synthetase Amico_0852 PF02609 Exonuclease VII small subunit Amico_0853 PF00830 Ribosomal L28 family Amico_0854 PF04263 Thiamin pyrophosphokinase, catalytic domain Amico_0854 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain Amico_0855 PF01580 FtsK/SpoIIIE family Amico_0855 PF09397 Ftsk gamma domain Amico_0856 PF01523 Putative modulator of DNA gyrase Amico_0858 PF02618 YceG-like family Amico_0859 PF04055 Radical SAM superfamily Amico_0859 PF13353 4Fe-4S single cluster domain Amico_0860 PF01871 AMMECR1 Amico_0860 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Amico_0861 PF02547 Queuosine biosynthesis protein Amico_0862 PF08486 Amico_0862 Amico_0863 PF11146 Amico_0863 Amico_0864 PF05491 Holliday junction DNA helicase ruvB C-terminus Amico_0864 PF05496 Holliday junction DNA helicase ruvB N-terminus Amico_0865 PF01330 RuvA N terminal domain Amico_0865 PF14520 Helix-hairpin-helix domain Amico_0866 PF02075 Crossover junction endodeoxyribonuclease RuvC Amico_0867 PF01709 Transcriptional regulator Amico_0868 PF02540 NAD synthase Amico_0869 PF01402 Ribbon-helix-helix protein, copG family Amico_0869 PF08753 NikR C terminal nickel binding domain Amico_0870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Amico_0870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Amico_0871 PF04551 GcpE protein Amico_0872 PF00595 PDZ domain (Also known as DHR or GLGF) Amico_0872 PF02163 Peptidase family M50 Amico_0873 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Amico_0873 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal Amico_0873 PF13288 DXP reductoisomerase C-terminal domain Amico_0874 PF01148 Cytidylyltransferase family Amico_0875 PF01255 Putative undecaprenyl diphosphate synthase Amico_0876 PF03167 Uracil DNA glycosylase superfamily Amico_0879 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Amico_0880 PF02350 UDP-N-acetylglucosamine 2-epimerase Amico_0881 PF00953 Glycosyl transferase family 4 Amico_0882 PF02502 Ribose/Galactose Isomerase Amico_0882 PF14681 Uracil phosphoribosyltransferase Amico_0883 PF03977 Amico_0883 Amico_0885 PF04277 Amico_0885 Amico_0886 PF01039 Carboxyl transferase domain Amico_0887 PF03308 ArgK protein Amico_0888 PF02310 B12 binding domain Amico_0889 PF01642 Methylmalonyl-CoA mutase Amico_0891 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Amico_0892 PF02578 Multi-copper polyphenol oxidoreductase laccase Amico_0893 PF08245 Mur ligase middle domain Amico_0894 PF00133 tRNA synthetases class I (I, L, M and V) Amico_0894 PF08264 Anticodon-binding domain of tRNA Amico_0894 PF10458 Valyl tRNA synthetase tRNA binding arm Amico_0895 PF01926 50S ribosome-binding GTPase Amico_0896 PF00004 ATPase family associated with various cellular activities (AAA) Amico_0896 PF02190 ATP-dependent protease La (LON) domain Amico_0896 PF05362 Lon protease (S16) C-terminal proteolytic domain Amico_0897 PF06689 ClpX C4-type zinc finger Amico_0897 PF07724 AAA domain (Cdc48 subfamily) Amico_0897 PF10431 C-terminal, D2-small domain, of ClpB protein Amico_0898 PF00574 Clp protease Amico_0899 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Amico_0899 PF05697 Bacterial trigger factor protein (TF) Amico_0899 PF05698 Bacterial trigger factor protein (TF) C-terminus Amico_0900 PF00313 'Cold-shock' DNA-binding domain Amico_0902 PF01979 Amidohydrolase family Amico_0904 PF01966 HD domain Amico_0904 PF12804 MobA-like NTP transferase domain Amico_0905 PF04011 LemA family Amico_0906 PF09972 Amico_0906 Amico_0907 PF14020 Amico_0907 Amico_0908 PF00005 ABC transporter Amico_0908 PF08402 TOBE domain Amico_0909 PF00528 Binding-protein-dependent transport system inner membrane component Amico_0910 PF13343 Bacterial extracellular solute-binding protein Amico_0911 PF06262 Possibl zinc metallo-peptidase Amico_0912 PF12900 Pyridoxamine 5'-phosphate oxidase Amico_0913 PF03313 Amico_0913 Amico_0914 PF01989 Protein of unknown function DUF126 Amico_0915 PF04412 Amico_0915 Amico_0917 PF03313 Amico_0917 Amico_0918 PF06808 Amico_0918 Amico_0919 PF04290 Amico_0919 Amico_0920 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_0921 PF02423 Ornithine cyclodeaminase/mu-crystallin family Amico_0922 PF01380 SIS domain Amico_0922 PF01418 Helix-turn-helix domain, rpiR family Amico_0924 PF13280 Amico_0924 Amico_0925 PF16868 Amico_0925 Amico_0926 PF06808 Amico_0926 Amico_0927 PF00595 PDZ domain (Also known as DHR or GLGF) Amico_0928 PF01645 Conserved region in glutamate synthase Amico_0929 PF13619 Amico_0929 Amico_0930 PF01935 Domain of unknown function DUF87 Amico_0930 PF05872 Amico_0930 Amico_0931 PF13289 Amico_0931 Amico_0933 PF14022 Amico_0933 Amico_0941 PF13091 PLD-like domain Amico_0941 PF13396 Amico_0941 Amico_0942 PF00149 Calcineurin-like phosphoesterase Amico_0944 PF05973 Amico_0944 Amico_0945 PF01381 Helix-turn-helix Amico_0946 PF02556 Preprotein translocase subunit SecB Amico_0947 PF00589 Phage integrase family Amico_0949 PF03796 DnaB-like helicase C terminal domain Amico_0953 PF13443 Cro/C1-type HTH DNA-binding domain Amico_0956 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Amico_0956 PF13378 Enolase C-terminal domain-like Amico_0957 PF05684 Amico_0957 Amico_0958 PF12986 Domain of unknown function (DUF3870) Amico_0959 PF05670 Amico_0959 Amico_0959 PF05833 Fibronectin-binding protein A N-terminus (FbpA) Amico_0960 PF00849 RNA pseudouridylate synthase Amico_0961 PF00133 tRNA synthetases class I (I, L, M and V) Amico_0961 PF08264 Anticodon-binding domain of tRNA Amico_0962 PF06808 Amico_0962 Amico_0963 PF08905 Amico_0963 Amico_0964 PF00717 Peptidase S24-like Amico_0964 PF01381 Helix-turn-helix Amico_0966 PF00817 impB/mucB/samB family Amico_0966 PF11799 impB/mucB/samB family C-terminal domain Amico_0966 PF13438 Amico_0966 Amico_0967 PF01687 Riboflavin kinase Amico_0967 PF06574 FAD synthetase Amico_0968 PF01509 TruB family pseudouridylate synthase (N terminal domain) Amico_0968 PF16198 Amico_0968 Amico_0969 PF01368 DHH family Amico_0969 PF02272 DHHA1 domain Amico_0970 PF02033 Ribosome-binding factor A Amico_0971 PF04456 Protein of unknown function (DUF503) Amico_0972 PF00009 Elongation factor Tu GTP binding domain Amico_0972 PF04760 Translation initiation factor IF-2, N-terminal region Amico_0972 PF11987 Translation-initiation factor 2 Amico_0973 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Amico_0974 PF04296 Protein of unknown function (DUF448) Amico_0975 PF08529 NusA N-terminal domain Amico_0975 PF13184 NusA-like KH domain Amico_0976 PF02576 Uncharacterised BCR, YhbC family COG0779 Amico_0976 PF17384 Amico_0976 Amico_0977 PF00478 IMP dehydrogenase / GMP reductase domain Amico_0977 PF00571 CBS domain Amico_0978 PF00749 tRNA synthetases class I (E and Q), catalytic domain Amico_0979 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Amico_0979 PF02542 YgbB family Amico_0981 PF02132 RecR protein Amico_0981 PF13662 Toprim domain Amico_0982 PF02575 YbaB/EbfC DNA-binding family Amico_0983 PF02590 Predicted SPOUT methyltransferase Amico_0984 PF01813 ATP synthase subunit D Amico_0985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amico_0985 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amico_0986 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amico_0986 PF02874 ATP synthase alpha/beta family, beta-barrel domain Amico_0986 PF16886 Amico_0986 Amico_0987 PF01990 ATP synthase (F/14-kDa) subunit Amico_0988 PF01992 ATP synthase (C/AC39) subunit Amico_0989 PF01991 ATP synthase (E/31 kDa) subunit Amico_0990 PF00137 ATP synthase subunit C Amico_0991 PF01496 V-type ATPase 116kDa subunit family Amico_0993 PF00571 CBS domain Amico_0994 PF03808 Amico_0994 Amico_0995 PF01546 Peptidase family M20/M25/M40 Amico_0995 PF07687 Peptidase dimerisation domain Amico_0996 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Amico_0996 PF02403 Seryl-tRNA synthetase N-terminal domain Amico_0997 PF00885 6,7-dimethyl-8-ribityllumazine synthase Amico_0998 PF00925 GTP cyclohydrolase II Amico_0998 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Amico_0999 PF00677 Lumazine binding domain Amico_1000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Amico_1000 PF01872 RibD C-terminal domain Amico_1001 PF01541 GIY-YIG catalytic domain Amico_1001 PF02151 UvrB/uvrC motif Amico_1001 PF08459 UvrC Helix-hairpin-helix N-terminal Amico_1001 PF12826 Helix-hairpin-helix motif Amico_1002 PF01406 tRNA synthetases class I (C) catalytic domain Amico_1002 PF09190 DALR domain Amico_1003 PF06177 Amico_1003 Amico_1004 PF01546 Peptidase family M20/M25/M40 Amico_1004 PF07687 Peptidase dimerisation domain Amico_1005 PF13649 Methyltransferase domain Amico_1008 PF02915 Rubrerythrin Amico_1009 PF01253 Translation initiation factor SUI1 Amico_1010 PF00293 NUDIX domain Amico_1011 PF01551 Peptidase family M23 Amico_1012 PF00591 Glycosyl transferase family, a/b domain Amico_1012 PF02885 Glycosyl transferase family, helical bundle domain Amico_1012 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Amico_1013 PF01048 Phosphorylase superfamily Amico_1014 PF00589 Phage integrase family Amico_1014 PF02899 Phage integrase, N-terminal SAM-like domain Amico_1015 PF00293 NUDIX domain Amico_1016 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amico_1017 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amico_1018 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amico_1018 PF17147 Amico_1018 Amico_1019 PF12838 4Fe-4S dicluster domain Amico_1021 PF00551 Formyl transferase Amico_1021 PF02911 Formyl transferase, C-terminal domain Amico_1022 PF01327 Polypeptide deformylase Amico_1023 PF00575 S1 RNA binding domain Amico_1024 PF02401 LytB protein Amico_1025 PF01715 IPP transferase Amico_1026 PF01119 DNA mismatch repair protein, C-terminal domain Amico_1026 PF08676 MutL C terminal dimerisation domain Amico_1026 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_1027 PF00488 MutS domain V Amico_1027 PF01624 MutS domain I Amico_1027 PF05188 MutS domain II Amico_1027 PF05190 MutS family domain IV Amico_1027 PF05192 MutS domain III Amico_1028 PF03652 Uncharacterised protein family (UPF0081) Amico_1029 PF01411 tRNA synthetases class II (A) Amico_1029 PF02272 DHHA1 domain Amico_1029 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Amico_1030 PF01979 Amidohydrolase family Amico_1031 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Amico_1031 PF05221 S-adenosyl-L-homocysteine hydrolase Amico_1032 PF01008 Initiation factor 2 subunit family Amico_1033 PF02601 Amico_1033 Amico_1033 PF13742 Amico_1033 Amico_1034 PF01029 NusB family Amico_1036 PF03780 Amico_1036 Amico_1038 PF01132 Elongation factor P (EF-P) OB domain Amico_1038 PF08207 Elongation factor P (EF-P) KOW-like domain Amico_1038 PF09285 Elongation factor P, C-terminal Amico_1039 PF00155 Aminotransferase class I and II Amico_1040 PF01371 Trp repressor protein Amico_1041 PF00730 HhH-GPD superfamily base excision DNA repair protein Amico_1042 PF05362 Lon protease (S16) C-terminal proteolytic domain Amico_1042 PF13654 AAA domain Amico_1043 PF03054 tRNA methyl transferase Amico_1044 PF00122 E1-E2 ATPase Amico_1044 PF00689 Cation transporting ATPase, C-terminus Amico_1044 PF00690 Cation transporter/ATPase, N-terminus Amico_1044 PF00702 haloacid dehalogenase-like hydrolase Amico_1045 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Amico_1046 PF00708 Acylphosphatase Amico_1046 PF01300 Telomere recombination Amico_1046 PF07503 HypF finger Amico_1047 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Amico_1048 PF00206 Lyase Amico_1048 PF10397 Adenylosuccinate lyase C-terminus Amico_1049 PF14385 Amico_1049 Amico_1050 PF00448 SRP54-type protein, GTPase domain Amico_1050 PF02881 SRP54-type protein, helical bundle domain Amico_1051 PF04468 Amico_1051 Amico_1052 PF13177 DNA polymerase III, delta subunit Amico_1053 PF02223 Thymidylate kinase Amico_1054 PF05580 Amico_1054 Amico_1056 PF00586 AIR synthase related protein, N-terminal domain Amico_1056 PF02769 AIR synthase related protein, C-terminal domain Amico_1057 PF07690 Major Facilitator Superfamily Amico_1059 PF00156 Phosphoribosyl transferase domain Amico_1060 PF00035 Double-stranded RNA binding motif Amico_1060 PF14622 Ribonuclease-III-like Amico_1061 PF00109 Beta-ketoacyl synthase, N-terminal domain Amico_1061 PF02801 Beta-ketoacyl synthase, C-terminal domain Amico_1062 PF00550 Phosphopantetheine attachment site Amico_1063 PF13561 Enoyl-(Acyl carrier protein) reductase Amico_1064 PF00698 Acyl transferase domain Amico_1065 PF03060 Nitronate monooxygenase Amico_1066 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Amico_1066 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Amico_1067 PF02504 Fatty acid synthesis protein Amico_1069 PF01783 Ribosomal L32p protein family Amico_1070 PF02620 Amico_1070 Amico_1071 PF00871 Acetokinase family Amico_1072 PF05636 HIGH Nucleotidyl Transferase Amico_1073 PF01467 Cytidylyltransferase Amico_1074 PF03602 Conserved hypothetical protein 95 Amico_1075 PF01980 Uncharacterised protein family UPF0066 Amico_1076 PF02390 Putative methyltransferase Amico_1077 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amico_1077 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amico_1077 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amico_1077 PF10371 Domain of unknown function Amico_1077 PF13484 Amico_1077 Amico_1077 PF17147 Amico_1077 Amico_1078 PF00398 Ribosomal RNA adenine dimethylase Amico_1079 PF00216 Bacterial DNA-binding protein Amico_1080 PF01926 50S ribosome-binding GTPase Amico_1080 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Amico_1082 PF02441 Flavoprotein Amico_1082 PF04127 DNA / pantothenate metabolism flavoprotein Amico_1084 PF00625 Guanylate kinase Amico_1085 PF04025 Amico_1085 Amico_1086 PF03755 Amico_1086 Amico_1086 PF08340 Amico_1086 Amico_1087 PF01926 50S ribosome-binding GTPase Amico_1087 PF13167 Amico_1087 Amico_1087 PF16360 Amico_1087 Amico_1088 PF01553 Acyltransferase Amico_1089 PF02224 Cytidylate kinase Amico_1090 PF00849 RNA pseudouridylate synthase Amico_1090 PF01479 S4 domain Amico_1091 PF04079 Putative transcriptional regulators (Ypuh-like) Amico_1092 PF02616 ScpA/B protein Amico_1093 PF00579 tRNA synthetases class I (W and Y) Amico_1094 PF01784 NIF3 (NGG1p interacting factor 3) Amico_1099 PF16083 Amico_1099 Amico_1100 PF08291 Peptidase M15 Amico_1101 PF14301 Amico_1101 Amico_1102 PF12571 Amico_1102 Amico_1103 PF09684 Amico_1103 Amico_1104 PF04865 Amico_1104 Amico_1105 PF04965 Gene 25-like lysozyme Amico_1106 PF06995 Amico_1106 Amico_1108 PF04717 Phage-related baseplate assembly protein Amico_1109 PF05954 Phage late control gene D protein (GPD) Amico_1110 PF05489 Phage Tail Protein X Amico_1111 PF10145 Amico_1111 Amico_1112 PF10109 Amico_1112 Amico_1113 PF04985 Amico_1113 Amico_1117 PF06763 Amico_1117 Amico_1118 PF13856 ATP-binding sugar transporter from pro-phage Amico_1119 PF09956 Amico_1119 Amico_1120 PF04586 Amico_1120 Amico_1121 PF05136 Amico_1121 Amico_1123 PF05876 Amico_1123 Amico_1125 PF00589 Phage integrase family Amico_1129 PF14354 Amico_1129 Amico_1131 PF01695 IstB-like ATP binding protein Amico_1132 PF13730 Amico_1132 Amico_1133 PF00692 dUTPase Amico_1134 PF14359 Domain of unknown function (DUF4406) Amico_1136 PF02498 Amico_1136 Amico_1136 PF03374 Amico_1136 Amico_1141 PF01381 Helix-turn-helix Amico_1142 PF00717 Peptidase S24-like Amico_1142 PF01381 Helix-turn-helix Amico_1143 PF14470 Bacterial PH domain Amico_1146 PF03372 Endonuclease/Exonuclease/phosphatase family Amico_1147 PF13304 AAA domain Amico_1148 PF02086 D12 class N6 adenine-specific DNA methyltransferase Amico_1150 PF13274 Amico_1150 Amico_1151 PF00589 Phage integrase family Amico_1151 PF13356 Domain of unknown function (DUF4102) Amico_1152 PF13370 4Fe-4S single cluster domain Amico_1153 PF00156 Phosphoribosyl transferase domain Amico_1153 PF09182 Bacterial purine repressor, N-terminal Amico_1154 PF08544 GHMP kinases C terminal Amico_1155 PF06257 Protein of unknown function (DUF1021) Amico_1156 PF00009 Elongation factor Tu GTP binding domain Amico_1156 PF03144 Elongation factor Tu domain 2 Amico_1156 PF09107 Elongation factor SelB, winged helix Amico_1157 PF03841 L-seryl-tRNA selenium transferase Amico_1157 PF12390 Amico_1157 Amico_1158 PF01206 Sulfurtransferase TusA Amico_1158 PF02635 DsrE/DsrF-like family Amico_1160 PF04055 Radical SAM superfamily Amico_1160 PF06969 HemN C-terminal domain Amico_1161 PF00009 Elongation factor Tu GTP binding domain Amico_1161 PF00679 Elongation factor G C-terminus Amico_1161 PF03144 Elongation factor Tu domain 2 Amico_1161 PF06421 GTP-binding protein LepA C-terminus Amico_1162 PF01259 SAICAR synthetase Amico_1163 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Amico_1164 PF13507 CobB/CobQ-like glutamine amidotransferase domain Amico_1165 PF00586 AIR synthase related protein, N-terminal domain Amico_1165 PF02769 AIR synthase related protein, C-terminal domain Amico_1166 PF13537 Glutamine amidotransferase domain Amico_1167 PF00586 AIR synthase related protein, N-terminal domain Amico_1167 PF02769 AIR synthase related protein, C-terminal domain Amico_1168 PF00551 Formyl transferase Amico_1169 PF01808 AICARFT/IMPCHase bienzyme Amico_1169 PF02142 MGS-like domain Amico_1170 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Amico_1170 PF02843 Phosphoribosylglycinamide synthetase, C domain Amico_1170 PF02844 Phosphoribosylglycinamide synthetase, N domain Amico_1171 PF00731 AIR carboxylase Amico_1173 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amico_1174 PF00764 Arginosuccinate synthase Amico_1175 PF01975 Survival protein SurE Amico_1176 PF02163 Peptidase family M50 Amico_1177 PF00571 CBS domain Amico_1177 PF01368 DHH family Amico_1177 PF01743 Poly A polymerase head domain Amico_1177 PF12627 Probable RNA and SrmB- binding site of polymerase A Amico_1178 PF01121 Dephospho-CoA kinase Amico_1179 PF00580 UvrD/REP helicase N-terminal domain Amico_1179 PF13361 UvrD-like helicase C-terminal domain Amico_1180 PF02492 CobW/HypB/UreG, nucleotide-binding domain Amico_1181 PF01155 Hydrogenase expression/synthesis hypA family Amico_1182 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Amico_1182 PF16321 Amico_1182 Amico_1183 PF00155 Aminotransferase class I and II Amico_1184 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amico_1184 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amico_1185 PF00860 Permease family Amico_1186 PF01765 Ribosome recycling factor Amico_1187 PF00696 Amino acid kinase family Amico_1188 PF00889 Elongation factor TS Amico_1189 PF00318 Ribosomal protein S2 Amico_1190 PF02583 Metal-sensitive transcriptional repressor Amico_1191 PF01161 Phosphatidylethanolamine-binding protein Amico_1193 PF01546 Peptidase family M20/M25/M40 Amico_1193 PF07687 Peptidase dimerisation domain Amico_1194 PF00571 CBS domain Amico_1194 PF01769 Divalent cation transporter Amico_1194 PF03448 MgtE intracellular N domain Amico_1196 PF02643 Uncharacterized ACR, COG1430 Amico_1197 PF00482 Type II secretion system (T2SS), protein F Amico_1198 PF00482 Type II secretion system (T2SS), protein F Amico_1199 PF00437 Type II/IV secretion system protein Amico_1200 PF00072 Response regulator receiver domain Amico_1200 PF10609 ParA/MinD ATPase like Amico_1201 PF00263 Amico_1201 Amico_1201 PF04972 BON domain Amico_1201 PF13629 Amico_1201 Amico_1202 PF08666 SAF domain Amico_1202 PF16976 Amico_1202 Amico_1203 PF13400 Amico_1203 Amico_1204 PF07811 Amico_1204 Amico_1205 PF01478 Type IV leader peptidase family Amico_1207 PF04964 Amico_1207 Amico_1208 PF00072 Response regulator receiver domain Amico_1208 PF00196 Bacterial regulatory proteins, luxR family Amico_1209 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_1209 PF07730 Histidine kinase Amico_1210 PF00108 Thiolase, N-terminal domain Amico_1210 PF02803 Thiolase, C-terminal domain Amico_1211 PF01144 Coenzyme A transferase Amico_1212 PF01144 Coenzyme A transferase Amico_1213 PF06808 Amico_1213 Amico_1215 PF00202 Aminotransferase class-III Amico_1217 PF16576 Amico_1217 Amico_1218 PF02321 Outer membrane efflux protein Amico_1219 PF00873 AcrB/AcrD/AcrF family Amico_1220 PF00440 Bacterial regulatory proteins, tetR family Amico_1221 PF00990 GGDEF domain Amico_1222 PF07883 Cupin domain Amico_1223 PF00582 Universal stress protein family Amico_1224 PF02274 Amidinotransferase Amico_1225 PF09861 Domain of unknown function (DUF2088) Amico_1226 PF02652 Amico_1226 Amico_1227 PF00155 Aminotransferase class I and II Amico_1229 PF02915 Rubrerythrin Amico_1230 PF14437 Amico_1230 Amico_1231 PF00795 Carbon-nitrogen hydrolase Amico_1232 PF04074 Domain of unknown function (DUF386) Amico_1234 PF02374 Anion-transporting ATPase Amico_1236 PF01361 Tautomerase enzyme Amico_1237 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1238 PF02127 Aminopeptidase I zinc metalloprotease (M18) Amico_1239 PF05161 MOFRL family Amico_1239 PF13660 Domain of unknown function (DUF4147) Amico_1240 PF08348 Amico_1240 Amico_1240 PF13309 Amico_1240 Amico_1243 PF03632 Glycosyl hydrolase family 65 central catalytic domain Amico_1243 PF03636 Glycosyl hydrolase family 65, N-terminal domain Amico_1244 PF02358 Trehalose-phosphatase Amico_1244 PF13419 Haloacid dehalogenase-like hydrolase Amico_1245 PF02742 Iron dependent repressor, metal binding and dimerisation domain Amico_1245 PF04023 FeoA domain Amico_1246 PF04023 FeoA domain Amico_1247 PF04023 FeoA domain Amico_1248 PF02421 Ferrous iron transport protein B Amico_1248 PF07664 Amico_1248 Amico_1248 PF07670 Nucleoside recognition Amico_1249 PF00857 Isochorismatase family Amico_1250 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amico_1250 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Amico_1251 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amico_1252 PF02423 Ornithine cyclodeaminase/mu-crystallin family Amico_1253 PF13274 Amico_1253 Amico_1253 PF15731 Amico_1253 Amico_1255 PF01177 Asp/Glu/Hydantoin racemase Amico_1256 PF09719 Putative redox-active protein (C_GCAxxG_C_C) Amico_1257 PF00293 NUDIX domain Amico_1258 PF13145 PPIC-type PPIASE domain Amico_1258 PF13624 SurA N-terminal domain Amico_1259 PF00476 DNA polymerase family A Amico_1259 PF01367 5'-3' exonuclease, C-terminal SAM fold Amico_1259 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Amico_1260 PF00571 CBS domain Amico_1260 PF01368 DHH family Amico_1260 PF02833 DHHA2 domain Amico_1260 PF07085 DRTGG domain Amico_1261 PF00749 tRNA synthetases class I (E and Q), catalytic domain Amico_1262 PF13237 4Fe-4S dicluster domain Amico_1262 PF14697 4Fe-4S dicluster domain Amico_1263 PF00146 NADH dehydrogenase Amico_1264 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Amico_1264 PF00374 Nickel-dependent hydrogenase Amico_1265 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Amico_1266 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Amico_1268 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Amico_1269 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Amico_1270 PF04039 Amico_1270 Amico_1272 PF13244 Amico_1272 Amico_1273 PF03334 Amico_1273 Amico_1274 PF04066 Amico_1274 Amico_1275 PF01899 Amico_1275 Amico_1276 PF00892 EamA-like transporter family Amico_1278 PF04055 Radical SAM superfamily Amico_1278 PF08497 Amico_1278 Amico_1278 PF11842 Amico_1278 Amico_1280 PF02146 Sir2 family Amico_1281 PF01544 CorA-like Mg2+ transporter protein Amico_1282 PF02417 Amico_1282 Amico_1283 PF02417 Amico_1283 Amico_1284 PF00149 Calcineurin-like phosphoesterase Amico_1287 PF02080 TrkA-C domain Amico_1287 PF02254 TrkA-N domain Amico_1288 PF02386 Cation transport protein Amico_1289 PF00999 Sodium/hydrogen exchanger family Amico_1289 PF02080 TrkA-C domain Amico_1290 PF13459 4Fe-4S single cluster domain Amico_1291 PF00571 CBS domain Amico_1291 PF01595 Amico_1291 Amico_1291 PF03471 Transporter associated domain Amico_1293 PF01554 MatE Amico_1294 PF04172 Amico_1294 Amico_1295 PF03788 Amico_1295 Amico_1296 PF01042 Endoribonuclease L-PSP Amico_1297 PF01970 Amico_1297 Amico_1298 PF07331 Amico_1298 Amico_1299 PF03401 Tripartite tricarboxylate transporter family receptor Amico_1300 PF01557 Fumarylacetoacetate (FAA) hydrolase family Amico_1301 PF00180 Isocitrate/isopropylmalate dehydrogenase Amico_1302 PF00392 Bacterial regulatory proteins, gntR family Amico_1302 PF07729 FCD domain Amico_1303 PF00465 Iron-containing alcohol dehydrogenase Amico_1304 PF09861 Domain of unknown function (DUF2088) Amico_1305 PF06808 Amico_1305 Amico_1306 PF04290 Amico_1306 Amico_1307 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1308 PF00682 HMGL-like Amico_1309 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amico_1309 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amico_1310 PF00392 Bacterial regulatory proteins, gntR family Amico_1310 PF07729 FCD domain Amico_1311 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Amico_1313 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amico_1314 PF14697 4Fe-4S dicluster domain Amico_1315 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amico_1315 PF17147 Amico_1315 Amico_1316 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amico_1317 PF13714 Phosphoenolpyruvate phosphomutase Amico_1318 PF13714 Phosphoenolpyruvate phosphomutase Amico_1319 PF06808 Amico_1319 Amico_1320 PF04290 Amico_1320 Amico_1321 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1322 PF00392 Bacterial regulatory proteins, gntR family Amico_1322 PF07729 FCD domain Amico_1323 PF02515 CoA-transferase family III Amico_1324 PF00682 HMGL-like Amico_1325 PF02615 Malate/L-lactate dehydrogenase Amico_1326 PF17131 Amico_1326 Amico_1327 PF02687 Amico_1327 Amico_1328 PF02687 Amico_1328 Amico_1329 PF00005 ABC transporter Amico_1331 PF01935 Domain of unknown function DUF87 Amico_1332 PF00753 Metallo-beta-lactamase superfamily Amico_1333 PF04343 Amico_1333 Amico_1334 PF01381 Helix-turn-helix Amico_1334 PF06114 Domain of unknown function (DUF955) Amico_1336 PF07669 Eco57I restriction-modification methylase Amico_1336 PF12950 TaqI-like C-terminal specificity domain Amico_1337 PF00176 SNF2 family N-terminal domain Amico_1337 PF00271 Helicase conserved C-terminal domain Amico_1337 PF13091 PLD-like domain Amico_1338 PF07690 Major Facilitator Superfamily Amico_1339 PF01427 D-ala-D-ala dipeptidase Amico_1340 PF06808 Amico_1340 Amico_1341 PF04290 Amico_1341 Amico_1342 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1345 PF04055 Radical SAM superfamily Amico_1346 PF00440 Bacterial regulatory proteins, tetR family Amico_1346 PF08359 YsiA-like protein, C-terminal region Amico_1347 PF16576 Amico_1347 Amico_1348 PF02687 Amico_1348 Amico_1348 PF12704 MacB-like periplasmic core domain Amico_1349 PF00005 ABC transporter Amico_1350 PF01668 SmpB protein Amico_1352 PF00857 Isochorismatase family Amico_1353 PF00390 Malic enzyme, N-terminal domain Amico_1353 PF03949 Malic enzyme, NAD binding domain Amico_1354 PF00107 Zinc-binding dehydrogenase Amico_1354 PF08240 Alcohol dehydrogenase GroES-like domain Amico_1355 PF04191 Phospholipid methyltransferase Amico_1356 PF03706 Amico_1356 Amico_1357 PF13242 HAD-hyrolase-like Amico_1359 PF16363 Amico_1359 Amico_1360 PF00483 Nucleotidyl transferase Amico_1361 PF13580 SIS domain Amico_1362 PF00072 Response regulator receiver domain Amico_1362 PF00196 Bacterial regulatory proteins, luxR family Amico_1363 PF01171 PP-loop family Amico_1364 PF01458 Uncharacterized protein family (UPF0051) Amico_1365 PF00005 ABC transporter Amico_1366 PF00342 Phosphoglucose isomerase Amico_1367 PF00462 Glutaredoxin Amico_1368 PF00175 Oxidoreductase NAD-binding domain Amico_1368 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Amico_1369 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1369 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Amico_1371 PF00009 Elongation factor Tu GTP binding domain Amico_1371 PF00679 Elongation factor G C-terminus Amico_1371 PF03144 Elongation factor Tu domain 2 Amico_1371 PF03764 Elongation factor G, domain IV Amico_1371 PF14492 Elongation Factor G, domain II Amico_1372 PF02637 GatB domain Amico_1372 PF02934 GatB/GatE catalytic domain Amico_1373 PF01425 Amidase Amico_1374 PF02686 Glu-tRNAGln amidotransferase C subunit Amico_1375 PF00533 BRCA1 C Terminus (BRCT) domain Amico_1375 PF01653 NAD-dependent DNA ligase adenylation domain Amico_1375 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Amico_1375 PF03120 NAD-dependent DNA ligase OB-fold domain Amico_1375 PF12826 Helix-hairpin-helix motif Amico_1375 PF14520 Helix-hairpin-helix domain Amico_1376 PF00152 tRNA synthetases class II (D, K and N) Amico_1376 PF01336 OB-fold nucleic acid binding domain Amico_1377 PF01207 Dihydrouridine synthase (Dus) Amico_1378 PF03309 Type III pantothenate kinase Amico_1379 PF03772 Amico_1379 Amico_1380 PF10531 SLBB domain Amico_1380 PF12836 Helix-hairpin-helix motif Amico_1381 PF00919 Uncharacterized protein family UPF0004 Amico_1381 PF01938 TRAM domain Amico_1381 PF04055 Radical SAM superfamily Amico_1383 PF00497 Bacterial extracellular solute-binding proteins, family 3 Amico_1384 PF00301 Rubredoxin Amico_1385 PF00557 Metallopeptidase family M24 Amico_1385 PF01321 Creatinase/Prolidase N-terminal domain Amico_1386 PF00586 AIR synthase related protein, N-terminal domain Amico_1386 PF02769 AIR synthase related protein, C-terminal domain Amico_1387 PF02677 Amico_1387 Amico_1388 PF00456 Transketolase, thiamine diphosphate binding domain Amico_1388 PF02779 Transketolase, pyrimidine binding domain Amico_1388 PF02780 Transketolase, C-terminal domain Amico_1389 PF00842 Alanine racemase, C-terminal domain Amico_1389 PF01168 Alanine racemase, N-terminal domain Amico_1390 PF01235 Amico_1390 Amico_1391 PF02504 Fatty acid synthesis protein Amico_1392 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Amico_1394 PF07355 Amico_1394 Amico_1395 PF04723 Amico_1395 Amico_1396 PF04723 Amico_1396 Amico_1397 PF09338 Amico_1397 Amico_1398 PF00085 Thioredoxin Amico_1400 PF00209 Sodium:neurotransmitter symporter family Amico_1401 PF01455 HupF/HypC family Amico_1402 PF01924 Hydrogenase formation hypA family Amico_1403 PF00586 AIR synthase related protein, N-terminal domain Amico_1403 PF02769 AIR synthase related protein, C-terminal domain Amico_1404 PF13277 YmdB-like protein Amico_1405 PF00013 KH domain Amico_1405 PF01966 HD domain Amico_1405 PF12072 Amico_1405 Amico_1406 PF02631 RecX family Amico_1407 PF00270 DEAD/DEAH box helicase Amico_1407 PF00271 Helicase conserved C-terminal domain Amico_1407 PF17191 Amico_1407 Amico_1408 PF05103 DivIVA protein Amico_1409 PF04472 Protein of unknown function (DUF552) Amico_1410 PF01168 Alanine racemase, N-terminal domain Amico_1412 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amico_1412 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amico_1413 PF02649 Type I GTP cyclohydrolase folE2 Amico_1414 PF01242 6-pyruvoyl tetrahydropterin synthase Amico_1415 PF00120 Glutamine synthetase, catalytic domain Amico_1415 PF12437 Glutamine synthetase type III N terminal Amico_1416 PF04932 Amico_1416 Amico_1417 PF00772 DnaB-like helicase N terminal domain Amico_1417 PF03796 DnaB-like helicase C terminal domain Amico_1418 PF01281 Ribosomal protein L9, N-terminal domain Amico_1418 PF03948 Ribosomal protein L9, C-terminal domain Amico_1419 PF09991 Amico_1419 Amico_1420 PF01084 Ribosomal protein S18 Amico_1421 PF00436 Single-strand binding protein family Amico_1422 PF01250 Ribosomal protein S6 Amico_1424 PF00750 tRNA synthetases class I (R) Amico_1424 PF03485 Arginyl tRNA synthetase N terminal domain Amico_1424 PF05746 DALR anticodon binding domain Amico_1426 PF01043 SecA preprotein cross-linking domain Amico_1426 PF02810 SEC-C motif Amico_1426 PF07516 SecA Wing and Scaffold domain Amico_1426 PF07517 SecA DEAD-like domain Amico_1427 PF01546 Peptidase family M20/M25/M40 Amico_1427 PF07687 Peptidase dimerisation domain Amico_1428 PF01066 CDP-alcohol phosphatidyltransferase Amico_1429 PF00005 ABC transporter Amico_1430 PF00005 ABC transporter Amico_1430 PF12399 Branched-chain amino acid ATP-binding cassette transporter Amico_1431 PF02653 Amico_1431 Amico_1432 PF02653 Amico_1432 Amico_1433 PF13458 Periplasmic binding protein Amico_1434 PF03477 ATP cone domain Amico_1435 PF09424 Yqey-like protein Amico_1436 PF01165 Ribosomal protein S21 Amico_1437 PF01230 HIT domain Amico_1438 PF00919 Uncharacterized protein family UPF0004 Amico_1438 PF04055 Radical SAM superfamily Amico_1439 PF06325 Ribosomal protein L11 methyltransferase (PrmA) Amico_1440 PF00226 DnaJ domain Amico_1440 PF00684 DnaJ central domain Amico_1440 PF01556 DnaJ C terminal domain Amico_1441 PF00012 Hsp70 protein Amico_1442 PF01025 GrpE Amico_1443 PF01628 HrcA protein C terminal domain Amico_1444 PF00300 Histidine phosphatase superfamily (branch 1) Amico_1445 PF00809 Pterin binding enzyme Amico_1446 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Amico_1448 PF00578 AhpC/TSA family Amico_1449 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amico_1449 PF12367 Amico_1449 Amico_1450 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amico_1450 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amico_1452 PF02554 Amico_1452 Amico_1452 PF13722 Amico_1452 Amico_1454 PF00709 Adenylosuccinate synthetase Amico_1455 PF04748 Divergent polysaccharide deacetylase Amico_1456 PF03572 Peptidase family S41 Amico_1456 PF13180 PDZ domain Amico_1457 PF01551 Peptidase family M23 Amico_1459 PF00005 ABC transporter Amico_1460 PF02779 Transketolase, pyrimidine binding domain Amico_1460 PF02780 Transketolase, C-terminal domain Amico_1461 PF00456 Transketolase, thiamine diphosphate binding domain Amico_1462 PF04230 Amico_1462 Amico_1464 PF02545 Maf-like protein Amico_1466 PF02673 Amico_1466 Amico_1467 PF00753 Metallo-beta-lactamase superfamily Amico_1467 PF07521 RNA-metabolising metallo-beta-lactamase Amico_1468 PF01272 Transcription elongation factor, GreA/GreB, C-term Amico_1468 PF03449 Transcription elongation factor, N-terminal Amico_1469 PF01820 D-ala D-ala ligase N-terminus Amico_1469 PF07478 D-ala D-ala ligase C-terminus Amico_1474 PF00117 Glutamine amidotransferase class-I Amico_1474 PF06418 CTP synthase N-terminus Amico_1475 PF01476 LysM domain Amico_1475 PF01551 Peptidase family M23 Amico_1476 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Amico_1476 PF07497 Rho termination factor, RNA-binding domain Amico_1476 PF07498 Rho termination factor, N-terminal domain Amico_1477 PF00923 Transaldolase Amico_1479 PF07155 ECF-type riboflavin transporter, S component Amico_1480 PF14336 Domain of unknown function (DUF4392) Amico_1481 PF00365 Phosphofructokinase Amico_1484 PF00395 S-layer homology domain Amico_1484 PF07396 Phosphate-selective porin O and P Amico_1485 PF04932 Amico_1485 Amico_1486 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Amico_1487 PF00534 Glycosyl transferases group 1 Amico_1487 PF13439 Glycosyltransferase Family 4 Amico_1488 PF00534 Glycosyl transferases group 1 Amico_1488 PF13439 Glycosyltransferase Family 4 Amico_1489 PF06258 Amico_1489 Amico_1490 PF02348 Cytidylyltransferase Amico_1491 PF01916 Deoxyhypusine synthase Amico_1492 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Amico_1493 PF00571 CBS domain Amico_1493 PF01380 SIS domain Amico_1494 PF00793 DAHP synthetase I family Amico_1495 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Amico_1496 PF00005 ABC transporter Amico_1496 PF00664 ABC transporter transmembrane region Amico_1498 PF02684 Amico_1498 Amico_1499 PF06230 Protein of unknown function (DUF1009) Amico_1500 PF03739 Amico_1500 Amico_1501 PF08282 haloacid dehalogenase-like hydrolase Amico_1502 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_1502 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Amico_1503 PF07977 FabA-like domain Amico_1504 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Amico_1505 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_1507 PF01103 Surface antigen Amico_1507 PF07244 Surface antigen variable number repeat Amico_1509 PF04542 Sigma-70 region 2 Amico_1510 PF00300 Histidine phosphatase superfamily (branch 1) Amico_1511 PF00144 Beta-lactamase Amico_1512 PF00206 Lyase Amico_1512 PF14698 Argininosuccinate lyase C-terminal Amico_1513 PF04417 Amico_1513 Amico_1514 PF00575 S1 RNA binding domain Amico_1515 PF00072 Response regulator receiver domain Amico_1516 PF06018 CodY GAF-like domain Amico_1516 PF08222 CodY helix-turn-helix domain Amico_1517 PF00004 ATPase family associated with various cellular activities (AAA) Amico_1517 PF07724 AAA domain (Cdc48 subfamily) Amico_1517 PF10431 C-terminal, D2-small domain, of ClpB protein Amico_1518 PF00227 Proteasome subunit Amico_1519 PF00589 Phage integrase family Amico_1519 PF02899 Phage integrase, N-terminal SAM-like domain Amico_1520 PF01134 Glucose inhibited division protein A Amico_1521 PF01131 DNA topoisomerase Amico_1521 PF01396 Amico_1521 Amico_1521 PF01751 Toprim domain Amico_1523 PF02481 DNA recombination-mediator protein A Amico_1524 PF01078 Magnesium chelatase, subunit ChlI Amico_1524 PF13335 Amico_1524 Amico_1524 PF13541 Subunit ChlI of Mg-chelatase Amico_1525 PF02021 Uncharacterised protein family UPF0102 Amico_1526 PF01351 Ribonuclease HII Amico_1527 PF01926 50S ribosome-binding GTPase Amico_1528 PF00717 Peptidase S24-like Amico_1530 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Amico_1531 PF00037 4Fe-4S binding domain Amico_1531 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Amico_1531 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Amico_1532 PF03061 Thioesterase superfamily Amico_1533 PF13380 CoA binding domain Amico_1534 PF01769 Divalent cation transporter Amico_1535 PF02423 Ornithine cyclodeaminase/mu-crystallin family Amico_1536 PF00717 Peptidase S24-like Amico_1537 PF01268 Formate--tetrahydrofolate ligase Amico_1538 PF04961 Formiminotransferase-cyclodeaminase Amico_1539 PF02971 Formiminotransferase domain Amico_1539 PF07837 Formiminotransferase domain, N-terminal subdomain Amico_1540 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1541 PF06808 Amico_1541 Amico_1542 PF04290 Amico_1542 Amico_1543 PF01546 Peptidase family M20/M25/M40 Amico_1543 PF07687 Peptidase dimerisation domain Amico_1544 PF13556 PucR C-terminal helix-turn-helix domain Amico_1545 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Amico_1545 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Amico_1546 PF01268 Formate--tetrahydrofolate ligase Amico_1547 PF01139 tRNA-splicing ligase RtcB Amico_1548 PF01951 Archease protein family (MTH1598/TM1083) Amico_1549 PF03977 Amico_1549 Amico_1550 PF04015 Amico_1550 Amico_1550 PF13237 4Fe-4S dicluster domain Amico_1553 PF00374 Nickel-dependent hydrogenase Amico_1554 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Amico_1555 PF00384 Molybdopterin oxidoreductase Amico_1555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Amico_1555 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Amico_1555 PF13187 4Fe-4S dicluster domain Amico_1555 PF13510 2Fe-2S iron-sulfur cluster binding domain Amico_1556 PF00037 4Fe-4S binding domain Amico_1556 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amico_1556 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Amico_1556 PF10531 SLBB domain Amico_1556 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Amico_1557 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amico_1558 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Amico_1559 PF00005 ABC transporter Amico_1560 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1561 PF12849 PBP superfamily domain Amico_1562 PF01554 MatE Amico_1563 PF01293 Phosphoenolpyruvate carboxykinase Amico_1564 PF03477 ATP cone domain Amico_1564 PF13597 Anaerobic ribonucleoside-triphosphate reductase Amico_1565 PF04055 Radical SAM superfamily Amico_1565 PF13353 4Fe-4S single cluster domain Amico_1567 PF00005 ABC transporter Amico_1568 PF02653 Amico_1568 Amico_1569 PF02653 Amico_1569 Amico_1570 PF02608 Basic membrane protein Amico_1571 PF02872 5'-nucleotidase, C-terminal domain Amico_1572 PF03167 Uracil DNA glycosylase superfamily Amico_1574 PF03099 Biotin/lipoate A/B protein ligase family Amico_1574 PF10437 Bacterial lipoate protein ligase C-terminus Amico_1575 PF00005 ABC transporter Amico_1575 PF08402 TOBE domain Amico_1576 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1577 PF13343 Bacterial extracellular solute-binding protein Amico_1578 PF03099 Biotin/lipoate A/B protein ligase family Amico_1578 PF10437 Bacterial lipoate protein ligase C-terminus Amico_1579 PF01571 Aminomethyltransferase folate-binding domain Amico_1579 PF08669 Glycine cleavage T-protein C-terminal barrel domain Amico_1580 PF01597 Glycine cleavage H-protein Amico_1581 PF02347 Glycine cleavage system P-protein Amico_1582 PF02347 Glycine cleavage system P-protein Amico_1583 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Amico_1583 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1584 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Amico_1584 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1585 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Amico_1585 PF00364 Biotin-requiring enzyme Amico_1585 PF02817 e3 binding domain Amico_1586 PF06808 Amico_1586 Amico_1587 PF04290 Amico_1587 Amico_1588 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1589 PF03479 Domain of unknown function (DUF296) Amico_1590 PF02779 Transketolase, pyrimidine binding domain Amico_1590 PF02780 Transketolase, C-terminal domain Amico_1591 PF00676 Dehydrogenase E1 component Amico_1592 PF00392 Bacterial regulatory proteins, gntR family Amico_1592 PF07729 FCD domain Amico_1593 PF01661 Macro domain Amico_1596 PF00156 Phosphoribosyl transferase domain Amico_1597 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Amico_1598 PF01180 Dihydroorotate dehydrogenase Amico_1599 PF00970 Oxidoreductase FAD-binding domain Amico_1599 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Amico_1600 PF01979 Amidohydrolase family Amico_1601 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Amico_1601 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Amico_1602 PF00156 Phosphoribosyl transferase domain Amico_1603 PF00155 Aminotransferase class I and II Amico_1604 PF02548 Ketopantoate hydroxymethyltransferase Amico_1605 PF01614 Bacterial transcriptional regulator Amico_1605 PF09339 IclR helix-turn-helix domain Amico_1606 PF12697 Alpha/beta hydrolase family Amico_1607 PF03372 Endonuclease/Exonuclease/phosphatase family Amico_1608 PF00892 EamA-like transporter family Amico_1609 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amico_1610 PF02915 Rubrerythrin Amico_1611 PF00501 AMP-binding enzyme Amico_1611 PF13193 AMP-binding enzyme C-terminal domain Amico_1612 PF01546 Peptidase family M20/M25/M40 Amico_1612 PF07687 Peptidase dimerisation domain Amico_1614 PF00731 AIR carboxylase Amico_1615 PF13023 HD domain Amico_1616 PF01546 Peptidase family M20/M25/M40 Amico_1616 PF07687 Peptidase dimerisation domain Amico_1618 PF02683 Amico_1618 Amico_1620 PF00009 Elongation factor Tu GTP binding domain Amico_1620 PF00679 Elongation factor G C-terminus Amico_1621 PF00990 GGDEF domain Amico_1621 PF01590 GAF domain Amico_1621 PF13185 GAF domain Amico_1622 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Amico_1622 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Amico_1623 PF12838 4Fe-4S dicluster domain Amico_1624 PF07883 Cupin domain Amico_1625 PF00989 PAS fold Amico_1625 PF01590 GAF domain Amico_1625 PF13188 PAS domain Amico_1626 PF04193 PQ loop repeat Amico_1627 PF00140 Sigma-70 factor, region 1 Amico_1627 PF03979 Sigma-70 factor, region 1 Amico_1627 PF04539 Sigma-70 region 3 Amico_1627 PF04542 Sigma-70 region 2 Amico_1627 PF04545 Sigma-70, region 4 Amico_1628 PF03577 Amico_1628 Amico_1634 PF03577 Amico_1634 Amico_1636 PF01554 MatE Amico_1637 PF09335 Amico_1637 Amico_1638 PF03190 Protein of unknown function, DUF255 Amico_1639 PF05437 Amico_1639 Amico_1640 PF03591 Amico_1640 Amico_1641 PF13419 Haloacid dehalogenase-like hydrolase Amico_1642 PF00742 Homoserine dehydrogenase Amico_1642 PF03447 Homoserine dehydrogenase, NAD binding domain Amico_1643 PF12705 PD-(D/E)XK nuclease superfamily Amico_1644 PF00580 UvrD/REP helicase N-terminal domain Amico_1644 PF12705 PD-(D/E)XK nuclease superfamily Amico_1644 PF13361 UvrD-like helicase C-terminal domain Amico_1645 PF02588 Amico_1645 Amico_1645 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Amico_1647 PF00204 DNA gyrase B Amico_1647 PF00986 DNA gyrase B subunit, carboxyl terminus Amico_1647 PF01751 Toprim domain Amico_1647 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_1648 PF01244 Membrane dipeptidase (Peptidase family M19) Amico_1649 PF00883 Cytosol aminopeptidase family, catalytic domain Amico_1649 PF02789 Cytosol aminopeptidase family, N-terminal domain Amico_1650 PF03576 Peptidase family S58 Amico_1651 PF04951 D-aminopeptidase Amico_1652 PF00392 Bacterial regulatory proteins, gntR family Amico_1652 PF07729 FCD domain Amico_1653 PF01208 Uroporphyrinogen decarboxylase (URO-D) Amico_1654 PF01546 Peptidase family M20/M25/M40 Amico_1654 PF07687 Peptidase dimerisation domain Amico_1655 PF00557 Metallopeptidase family M24 Amico_1655 PF01321 Creatinase/Prolidase N-terminal domain Amico_1656 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amico_1658 PF00005 ABC transporter Amico_1658 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_1659 PF00005 ABC transporter Amico_1659 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Amico_1660 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1660 PF12911 Amico_1660 Amico_1661 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1662 PF01743 Poly A polymerase head domain Amico_1663 PF02615 Malate/L-lactate dehydrogenase Amico_1664 PF09861 Domain of unknown function (DUF2088) Amico_1665 PF01081 KDPG and KHG aldolase Amico_1667 PF00005 ABC transporter Amico_1667 PF09383 NIL domain Amico_1668 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1669 PF03180 NLPA lipoprotein Amico_1670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Amico_1670 PF13378 Enolase C-terminal domain-like Amico_1671 PF00294 pfkB family carbohydrate kinase Amico_1672 PF01081 KDPG and KHG aldolase Amico_1673 PF01614 Bacterial transcriptional regulator Amico_1673 PF09339 IclR helix-turn-helix domain Amico_1674 PF06808 Amico_1674 Amico_1675 PF04290 Amico_1675 Amico_1676 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1677 PF04295 Amico_1677 Amico_1677 PF08666 SAF domain Amico_1678 PF12849 PBP superfamily domain Amico_1679 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1680 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1681 PF00005 ABC transporter Amico_1682 PF01895 PhoU domain Amico_1683 PF00072 Response regulator receiver domain Amico_1683 PF00486 Transcriptional regulatory protein, C terminal Amico_1684 PF00512 His Kinase A (phospho-acceptor) domain Amico_1684 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_1684 PF13188 PAS domain Amico_1684 PF16736 Amico_1684 Amico_1685 PF07155 ECF-type riboflavin transporter, S component Amico_1686 PF01177 Asp/Glu/Hydantoin racemase Amico_1687 PF00149 Calcineurin-like phosphoesterase Amico_1688 PF01614 Bacterial transcriptional regulator Amico_1688 PF09339 IclR helix-turn-helix domain Amico_1689 PF04290 Amico_1689 Amico_1690 PF06808 Amico_1690 Amico_1691 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1692 PF00202 Aminotransferase class-III Amico_1694 PF00291 Pyridoxal-phosphate dependent enzyme Amico_1696 PF01019 Gamma-glutamyltranspeptidase Amico_1697 PF07907 Amico_1697 Amico_1698 PF00245 Alkaline phosphatase Amico_1699 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Amico_1700 PF13714 Phosphoenolpyruvate phosphomutase Amico_1701 PF06808 Amico_1701 Amico_1702 PF16868 Amico_1702 Amico_1703 PF00694 Aconitase C-terminal domain Amico_1704 PF00330 Aconitase family (aconitate hydratase) Amico_1705 PF03972 MmgE/PrpD family Amico_1706 PF03972 MmgE/PrpD family Amico_1707 PF14330 Amico_1707 Amico_1708 PF03972 MmgE/PrpD family Amico_1709 PF07287 Amico_1709 Amico_1710 PF01995 Domain of unknown function DUF128 Amico_1710 PF08461 Ribonuclease R winged-helix domain Amico_1712 PF02706 Chain length determinant protein Amico_1712 PF13807 Amico_1712 Amico_1713 PF02563 Polysaccharide biosynthesis/export protein Amico_1713 PF06251 Capsule biosynthesis GfcC Amico_1713 PF10531 SLBB domain Amico_1715 PF02719 Polysaccharide biosynthesis protein Amico_1715 PF13727 CoA-binding domain Amico_1716 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Amico_1717 PF02397 Amico_1717 Amico_1718 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_1719 PF13439 Glycosyltransferase Family 4 Amico_1719 PF13692 Glycosyl transferases group 1 Amico_1720 PF02350 UDP-N-acetylglucosamine 2-epimerase Amico_1721 PF00534 Glycosyl transferases group 1 Amico_1722 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_1722 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Amico_1723 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Amico_1723 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Amico_1725 PF13561 Enoyl-(Acyl carrier protein) reductase Amico_1726 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Amico_1726 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Amico_1726 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Amico_1727 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Amico_1727 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Amico_1728 PF14296 Amico_1728 Amico_1730 PF01943 Amico_1730 Amico_1730 PF14667 Polysaccharide biosynthesis C-terminal domain Amico_1731 PF16363 Amico_1731 Amico_1732 PF00132 Bacterial transferase hexapeptide (six repeats) Amico_1733 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Amico_1734 PF00483 Nucleotidyl transferase Amico_1735 PF07429 Amico_1735 Amico_1736 PF07848 PaaX-like protein Amico_1737 PF00892 EamA-like transporter family Amico_1738 PF04542 Sigma-70 region 2 Amico_1739 PF08291 Peptidase M15 Amico_1740 PF12841 Amico_1740 Amico_1741 PF11148 Amico_1741 Amico_1742 PF07872 Amico_1742 Amico_1744 PF11299 Amico_1744 Amico_1745 PF07687 Peptidase dimerisation domain Amico_1747 PF06114 Domain of unknown function (DUF955) Amico_1748 PF12844 Helix-turn-helix domain Amico_1749 PF06808 Amico_1749 Amico_1750 PF04290 Amico_1750 Amico_1751 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1752 PF00155 Aminotransferase class I and II Amico_1753 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Amico_1753 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Amico_1754 PF07969 Amidohydrolase family Amico_1755 PF01513 ATP-NAD kinase Amico_1756 PF00266 Aminotransferase class-V Amico_1757 PF02347 Glycine cleavage system P-protein Amico_1758 PF07969 Amidohydrolase family Amico_1759 PF06808 Amico_1759 Amico_1760 PF04290 Amico_1760 Amico_1761 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1762 PF06865 Protein of unknown function (DUF1255) Amico_1763 PF00392 Bacterial regulatory proteins, gntR family Amico_1763 PF07729 FCD domain Amico_1764 PF01594 Amico_1764 Amico_1765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Amico_1766 PF00291 Pyridoxal-phosphate dependent enzyme Amico_1767 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Amico_1767 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1768 PF00701 Dihydrodipicolinate synthetase family Amico_1769 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease Amico_1770 PF06808 Amico_1770 Amico_1771 PF16868 Amico_1771 Amico_1772 PF07729 FCD domain Amico_1772 PF08461 Ribonuclease R winged-helix domain Amico_1773 PF13847 Methyltransferase domain Amico_1774 PF00313 'Cold-shock' DNA-binding domain Amico_1775 PF01797 Transposase IS200 like Amico_1775 PF13384 Homeodomain-like domain Amico_1776 PF01741 Large-conductance mechanosensitive channel, MscL Amico_1777 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Amico_1778 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1779 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1780 PF00005 ABC transporter Amico_1781 PF00005 ABC transporter Amico_1782 PF07690 Major Facilitator Superfamily Amico_1783 PF04434 Amico_1783 Amico_1783 PF13456 Reverse transcriptase-like Amico_1784 PF04321 RmlD substrate binding domain Amico_1785 PF00464 Serine hydroxymethyltransferase Amico_1786 PF00155 Aminotransferase class I and II Amico_1787 PF01370 NAD dependent epimerase/dehydratase family Amico_1790 PF00390 Malic enzyme, N-terminal domain Amico_1790 PF03949 Malic enzyme, NAD binding domain Amico_1791 PF00501 AMP-binding enzyme Amico_1791 PF13193 AMP-binding enzyme C-terminal domain Amico_1792 PF00733 Asparagine synthase Amico_1793 PF01969 Protein of unknown function DUF111 Amico_1794 PF01168 Alanine racemase, N-terminal domain Amico_1794 PF14031 Putative serine dehydratase domain Amico_1795 PF01546 Peptidase family M20/M25/M40 Amico_1795 PF07687 Peptidase dimerisation domain Amico_1797 PF11823 Amico_1797 Amico_1799 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Amico_1799 PF07992 Pyridine nucleotide-disulphide oxidoreductase Amico_1800 PF01546 Peptidase family M20/M25/M40 Amico_1801 PF00012 Hsp70 protein Amico_1803 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Amico_1803 PF02558 Ketopantoate reductase PanE/ApbA Amico_1804 PF06808 Amico_1804 Amico_1805 PF08905 Amico_1805 Amico_1806 PF16868 Amico_1806 Amico_1807 PF01380 SIS domain Amico_1807 PF01418 Helix-turn-helix domain, rpiR family Amico_1808 PF13476 AAA domain Amico_1809 PF00149 Calcineurin-like phosphoesterase Amico_1810 PF03600 Citrate transporter Amico_1811 PF10050 Amico_1811 Amico_1812 PF07690 Major Facilitator Superfamily Amico_1813 PF02829 3H domain Amico_1813 PF08279 HTH domain Amico_1814 PF13303 Amico_1814 Amico_1815 PF00990 GGDEF domain Amico_1816 PF01554 MatE Amico_1817 PF12802 MarR family Amico_1818 PF04349 Periplasmic glucan biosynthesis protein, MdoG Amico_1820 PF00535 Glycosyl transferase family 2 Amico_1821 PF00293 NUDIX domain Amico_1821 PF09297 NADH pyrophosphatase zinc ribbon domain Amico_1822 PF01966 HD domain Amico_1823 PF08534 Redoxin Amico_1826 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Amico_1828 PF01546 Peptidase family M20/M25/M40 Amico_1829 PF00701 Dihydrodipicolinate synthetase family Amico_1830 PF06808 Amico_1830 Amico_1831 PF04290 Amico_1831 Amico_1832 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1833 PF01177 Asp/Glu/Hydantoin racemase Amico_1834 PF01979 Amidohydrolase family Amico_1835 PF01979 Amidohydrolase family Amico_1836 PF01614 Bacterial transcriptional regulator Amico_1836 PF09339 IclR helix-turn-helix domain Amico_1837 PF00266 Aminotransferase class-V Amico_1838 PF01614 Bacterial transcriptional regulator Amico_1838 PF09339 IclR helix-turn-helix domain Amico_1839 PF00871 Acetokinase family Amico_1840 PF01515 Phosphate acetyl/butaryl transferase Amico_1841 PF01515 Phosphate acetyl/butaryl transferase Amico_1842 PF00871 Acetokinase family Amico_1843 PF01966 HD domain Amico_1843 PF04392 ABC transporter substrate binding protein Amico_1843 PF13426 PAS domain Amico_1844 PF01063 Aminotransferase class IV Amico_1845 PF00892 EamA-like transporter family Amico_1846 PF00875 DNA photolyase Amico_1847 PF02632 BioY family Amico_1848 PF01205 Uncharacterized protein family UPF0029 Amico_1849 PF01230 HIT domain Amico_1851 PF02195 ParB-like nuclease domain Amico_1852 PF13614 AAA domain Amico_1853 PF02527 rRNA small subunit methyltransferase G Amico_1854 PF00565 Staphylococcal nuclease homologue Amico_1856 PF07905 Amico_1856 Amico_1856 PF13556 PucR C-terminal helix-turn-helix domain Amico_1857 PF16481 Amico_1857 Amico_1859 PF01546 Peptidase family M20/M25/M40 Amico_1859 PF07687 Peptidase dimerisation domain Amico_1860 PF01546 Peptidase family M20/M25/M40 Amico_1860 PF07687 Peptidase dimerisation domain Amico_1861 PF00950 Amico_1861 Amico_1862 PF00005 ABC transporter Amico_1863 PF01297 Periplasmic solute binding protein family Amico_1870 PF00072 Response regulator receiver domain Amico_1870 PF00196 Bacterial regulatory proteins, luxR family Amico_1871 PF00989 PAS fold Amico_1871 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_1871 PF07730 Histidine kinase Amico_1871 PF13188 PAS domain Amico_1871 PF13426 PAS domain Amico_1872 PF01380 SIS domain Amico_1872 PF01418 Helix-turn-helix domain, rpiR family Amico_1873 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Amico_1873 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Amico_1874 PF00392 Bacterial regulatory proteins, gntR family Amico_1874 PF07729 FCD domain Amico_1875 PF11010 Amico_1875 Amico_1876 PF00795 Carbon-nitrogen hydrolase Amico_1877 PF03480 Bacterial extracellular solute-binding protein, family 7 Amico_1878 PF04290 Amico_1878 Amico_1879 PF06808 Amico_1879 Amico_1880 PF00326 Prolyl oligopeptidase family Amico_1881 PF13561 Enoyl-(Acyl carrier protein) reductase Amico_1882 PF00248 Aldo/keto reductase family Amico_1882 PF13534 4Fe-4S dicluster domain Amico_1883 PF01614 Bacterial transcriptional regulator Amico_1883 PF09339 IclR helix-turn-helix domain Amico_1885 PF01979 Amidohydrolase family Amico_1886 PF01175 Urocanase Amico_1886 PF17391 Amico_1886 Amico_1886 PF17392 Amico_1886 Amico_1888 PF13343 Bacterial extracellular solute-binding protein Amico_1889 PF00528 Binding-protein-dependent transport system inner membrane component Amico_1890 PF00005 ABC transporter Amico_1890 PF08402 TOBE domain Amico_1891 PF01869 BadF/BadG/BcrA/BcrD ATPase family Amico_1891 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Amico_1891 PF09989 Amico_1891 Amico_1892 PF03328 HpcH/HpaI aldolase/citrate lyase family Amico_1896 PF00122 E1-E2 ATPase Amico_1896 PF00403 Heavy-metal-associated domain Amico_1896 PF00702 haloacid dehalogenase-like hydrolase Amico_1897 PF00403 Heavy-metal-associated domain Amico_1898 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Amico_1898 PF07730 Histidine kinase Amico_1898 PF10114 Amico_1898 Amico_1899 PF00072 Response regulator receiver domain Amico_1899 PF00196 Bacterial regulatory proteins, luxR family Amico_1900 PF00464 Serine hydroxymethyltransferase Amico_1901 PF01546 Peptidase family M20/M25/M40 Amico_1901 PF07687 Peptidase dimerisation domain Amico_1903 PF01546 Peptidase family M20/M25/M40 Amico_1903 PF07687 Peptidase dimerisation domain Amico_1904 PF04961 Formiminotransferase-cyclodeaminase Amico_1905 PF00221 Aromatic amino acid lyase Amico_1906 PF03063 Prismane/CO dehydrogenase family Amico_1907 PF12837 4Fe-4S binding domain Amico_1908 PF02082 Transcriptional regulator Amico_1909 PF00266 Aminotransferase class-V Amico_1910 PF13240 Amico_1910 Amico_1910 PF14018 Amico_1910 Amico_1912 PF12773 Amico_1912 Amico_1912 PF13421 Amico_1912 Amico_1913 PF07690 Major Facilitator Superfamily