locus-tag class description AMJAP_0001 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0001 IPR013317 Chromosomal replication initiator protein DnaA AMJAP_0001 IPR018312 Chromosomal replication control, initiator DnaA, conserved site AMJAP_0001 IPR003593 AAA+ ATPase domain AMJAP_0001 IPR038454 DnaA, N-terminal domain superfamily AMJAP_0001 IPR024633 DnaA N-terminal domain AMJAP_0001 IPR020591 Chromosomal replication control, initiator DnaA-like AMJAP_0001 IPR001957 Chromosomal replication control, initiator DnaA AMJAP_0001 IPR010921 Trp repressor/replication initiator AMJAP_0001 IPR013159 Chromosomal replication initiator, DnaA C-terminal AMJAP_0002 IPR022637 DNA polymerase III, beta sliding clamp, central AMJAP_0002 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal AMJAP_0002 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal AMJAP_0002 IPR001001 DNA polymerase III, beta sliding clamp AMJAP_0003 IPR018078 DNA-binding, RecF, conserved site AMJAP_0003 IPR001238 DNA-binding, RecF AMJAP_0003 IPR003395 RecF/RecN/SMC, N-terminal AMJAP_0003 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0003 IPR042174 DNA-binding RecF, domain 2 AMJAP_0004 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMJAP_0004 IPR001241 DNA topoisomerase, type IIA AMJAP_0004 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_0004 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0004 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0004 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AMJAP_0004 IPR041423 DNA gyrase subunit B insert domain AMJAP_0004 IPR011557 DNA gyrase, subunit B AMJAP_0004 IPR002288 DNA gyrase B subunit, C-terminal AMJAP_0004 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_0004 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AMJAP_0004 IPR034160 DNA gyrase subunit B, TOPRIM domain AMJAP_0004 IPR006171 TOPRIM domain AMJAP_0004 IPR018522 DNA topoisomerase, type IIA, conserved site AMJAP_0009 IPR001584 Integrase, catalytic core AMJAP_0009 IPR036397 Ribonuclease H superfamily AMJAP_0009 IPR012337 Ribonuclease H-like superfamily AMJAP_0020 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase AMJAP_0020 IPR006543 Histidinol-phosphate phosphatase AMJAP_0020 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AMJAP_0020 IPR036412 HAD-like superfamily AMJAP_0020 IPR023214 HAD superfamily AMJAP_0021 IPR008909 DALR anticodon binding AMJAP_0021 IPR006194 Glycine-tRNA synthetase, heterodimeric AMJAP_0021 IPR015944 Glycine-tRNA ligase, beta subunit AMJAP_0022 IPR002310 Glycine-tRNA ligase, alpha subunit AMJAP_0022 IPR006194 Glycine-tRNA synthetase, heterodimeric AMJAP_0025 IPR004772 TrkH potassium transport family AMJAP_0025 IPR003445 Cation transporter AMJAP_0026 IPR006036 Potassium uptake protein TrkA AMJAP_0026 IPR006037 Regulator of K+ conductance, C-terminal AMJAP_0026 IPR003148 Regulator of K+ conductance, N-terminal AMJAP_0026 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AMJAP_0026 IPR036291 NAD(P)-binding domain superfamily AMJAP_0027 IPR004573 rRNA small subunit methyltransferase B AMJAP_0027 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site AMJAP_0027 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0027 IPR006027 NusB/RsmB/TIM44 AMJAP_0027 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type AMJAP_0027 IPR035926 NusB-like superfamily AMJAP_0027 IPR023267 RNA (C5-cytosine) methyltransferase AMJAP_0028 IPR002376 Formyl transferase, N-terminal AMJAP_0028 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain AMJAP_0028 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AMJAP_0028 IPR011034 Formyl transferase-like, C-terminal domain superfamily AMJAP_0028 IPR036477 Formyl transferase, N-terminal domain superfamily AMJAP_0028 IPR005793 Formyl transferase, C-terminal AMJAP_0028 IPR005794 Methionyl-tRNA formyltransferase AMJAP_0028 IPR037022 Formyl transferase, C-terminal domain superfamily AMJAP_0029 IPR023635 Peptide deformylase AMJAP_0029 IPR036821 Peptide deformylase superfamily AMJAP_0031 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0031 IPR041614 DprA, winged helix domain AMJAP_0031 IPR003488 DNA recombination-mediator protein A AMJAP_0032 IPR035893 PurE domain superfamily AMJAP_0032 IPR033747 Class I PurE AMJAP_0032 IPR000031 PurE domain AMJAP_0032 IPR024694 PurE, prokaryotic type AMJAP_0033 IPR006070 YrdC-like domain AMJAP_0033 IPR023535 Threonylcarbamoyl-AMP synthase AMJAP_0033 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMJAP_0034 IPR001260 Coproporphyrinogen III oxidase, aerobic AMJAP_0034 IPR018375 Coproporphyrinogen III oxidase, conserved site AMJAP_0034 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily AMJAP_0035 IPR036291 NAD(P)-binding domain superfamily AMJAP_0035 IPR041121 SDH, C-terminal AMJAP_0035 IPR011342 Shikimate dehydrogenase AMJAP_0035 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMJAP_0035 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal AMJAP_0035 IPR022893 Shikimate dehydrogenase family AMJAP_0036 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_0036 IPR041699 Lon protease, AAA domain AMJAP_0036 IPR008269 Peptidase S16, Lon proteolytic domain AMJAP_0036 IPR027065 Lon protease AMJAP_0036 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_0045 IPR001451 Hexapeptide repeat AMJAP_0045 IPR011004 Trimeric LpxA-like superfamily AMJAP_0046 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMJAP_0046 IPR001567 Peptidase M3A/M3B catalytic domain AMJAP_0047 IPR012658 Conserved hypothetical protein CHP02443 AMJAP_0048 IPR005019 Methyladenine glycosylase AMJAP_0048 IPR001674 GMP synthase, C-terminal AMJAP_0048 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0048 IPR011257 DNA glycosylase AMJAP_0048 IPR000182 GNAT domain AMJAP_0048 IPR025777 GMP synthetase ATP pyrophosphatase domain AMJAP_0048 IPR017926 Glutamine amidotransferase AMJAP_0048 IPR016181 Acyl-CoA N-acyltransferase AMJAP_0048 IPR029062 Class I glutamine amidotransferase-like AMJAP_0049 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase AMJAP_0049 IPR011042 Six-bladed beta-propeller, TolB-like AMJAP_0049 IPR012938 Glucose/Sorbosone dehydrogenase AMJAP_0050 IPR000620 EamA domain AMJAP_0051 IPR001626 ABC transporter, TroCD-like AMJAP_0051 IPR037294 ABC transporter, BtuC-like AMJAP_0052 IPR017882 Zinc import ATP-binding protein ZnuC AMJAP_0052 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0052 IPR003439 ABC transporter-like AMJAP_0052 IPR003593 AAA+ ATPase domain AMJAP_0052 IPR017871 ABC transporter, conserved site AMJAP_0053 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0053 IPR002481 Ferric-uptake regulator AMJAP_0053 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0054 IPR006127 Periplasmic solute binding protein, ZnuA-like AMJAP_0054 IPR035520 High-affinity zinc uptake system protein ZnuA AMJAP_0057 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0057 IPR000847 Transcription regulator HTH, LysR AMJAP_0057 IPR005119 LysR, substrate-binding AMJAP_0057 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0064 IPR011767 Glutaredoxin active site AMJAP_0064 IPR002109 Glutaredoxin AMJAP_0064 IPR011906 Glutaredoxin domain AMJAP_0064 IPR014025 Glutaredoxin subgroup AMJAP_0064 IPR037944 Peroxiredoxin-5-like AMJAP_0064 IPR036249 Thioredoxin-like superfamily AMJAP_0064 IPR013740 Redoxin AMJAP_0065 IPR004671 Na+/H+ antiporter NhaB AMJAP_0067 IPR023298 P-type ATPase, transmembrane domain superfamily AMJAP_0067 IPR018303 P-type ATPase, phosphorylation site AMJAP_0067 IPR023299 P-type ATPase, cytoplasmic domain N AMJAP_0067 IPR001757 P-type ATPase AMJAP_0067 IPR027256 P-type ATPase, subfamily IB AMJAP_0067 IPR006121 Heavy metal-associated domain, HMA AMJAP_0067 IPR017969 Heavy-metal-associated, conserved site AMJAP_0067 IPR023214 HAD superfamily AMJAP_0067 IPR036412 HAD-like superfamily AMJAP_0067 IPR008250 P-type ATPase, A domain superfamily AMJAP_0067 IPR036163 Heavy metal-associated domain superfamily AMJAP_0068 IPR000551 MerR-type HTH domain AMJAP_0068 IPR009061 Putative DNA-binding domain superfamily AMJAP_0068 IPR011789 Cu(I)-responsive transcriptional regulator AMJAP_0070 IPR036909 Cytochrome c-like domain superfamily AMJAP_0070 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AMJAP_0070 IPR008168 Cytochrome c, class IC AMJAP_0070 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily AMJAP_0070 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AMJAP_0070 IPR009056 Cytochrome c-like domain AMJAP_0071 IPR006043 Xanthine/uracil/vitamin C permease AMJAP_0071 IPR026033 Azaguanine-like transporters AMJAP_0073 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0073 IPR000640 Elongation factor EFG, domain V-like AMJAP_0073 IPR035647 EF-G domain III/V-like AMJAP_0073 IPR009022 Elongation factor G, domain III AMJAP_0073 IPR005517 Translation elongation factor EFG/EF2, domain IV AMJAP_0073 IPR004540 Translation elongation factor EFG/EF2 AMJAP_0073 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_0073 IPR000795 Transcription factor, GTP-binding domain AMJAP_0073 IPR005225 Small GTP-binding protein domain AMJAP_0073 IPR041095 Elongation Factor G, domain II AMJAP_0073 IPR004161 Translation elongation factor EFTu-like, domain 2 AMJAP_0073 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_0073 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_0073 IPR035649 EFG, domain V AMJAP_0073 IPR031157 Tr-type G domain, conserved site AMJAP_0074 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_0074 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_0074 IPR003593 AAA+ ATPase domain AMJAP_0074 IPR002197 DNA binding HTH domain, Fis-type AMJAP_0074 IPR009057 Homeobox-like domain superfamily AMJAP_0074 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0074 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_0074 IPR000014 PAS domain AMJAP_0074 IPR035965 PAS domain superfamily AMJAP_0074 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_0076 IPR017927 FAD-binding domain, ferredoxin reductase-type AMJAP_0076 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMJAP_0076 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMJAP_0076 IPR017938 Riboflavin synthase-like beta-barrel AMJAP_0076 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMJAP_0076 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMJAP_0076 IPR036010 2Fe-2S ferredoxin-like superfamily AMJAP_0076 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMJAP_0076 IPR012675 Beta-grasp domain superfamily AMJAP_0076 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMJAP_0077 IPR003838 ABC transporter permease protein domain AMJAP_0077 IPR003439 ABC transporter-like AMJAP_0077 IPR017871 ABC transporter, conserved site AMJAP_0077 IPR017911 ABC transporter, macrolide export, ATP-binding domain AMJAP_0077 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0077 IPR003593 AAA+ ATPase domain AMJAP_0077 IPR025857 MacB-like periplasmic core domain AMJAP_0080 IPR028348 FAD dependent protein AMJAP_0080 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_0084 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site AMJAP_0084 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0084 IPR000559 Formate-tetrahydrofolate ligase, FTHFS AMJAP_0086 IPR018060 DNA binding HTH domain, AraC-type AMJAP_0086 IPR011051 RmlC-like cupin domain superfamily AMJAP_0086 IPR014710 RmlC-like jelly roll fold AMJAP_0086 IPR018062 HTH domain AraC-type, conserved site AMJAP_0086 IPR003313 AraC-type arabinose-binding/dimerisation domain AMJAP_0086 IPR009057 Homeobox-like domain superfamily AMJAP_0089 IPR011051 RmlC-like cupin domain superfamily AMJAP_0089 IPR014710 RmlC-like jelly roll fold AMJAP_0089 IPR018062 HTH domain AraC-type, conserved site AMJAP_0089 IPR018060 DNA binding HTH domain, AraC-type AMJAP_0089 IPR009057 Homeobox-like domain superfamily AMJAP_0089 IPR032783 AraC-type transcription regulator, ligand-binding domain AMJAP_0089 IPR020449 Transcription regulator HTH, AraC- type AMJAP_0090 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0090 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain AMJAP_0090 IPR000847 Transcription regulator HTH, LysR AMJAP_0090 IPR023746 Transcription regulator HTH, YidZ AMJAP_0090 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0090 IPR005119 LysR, substrate-binding AMJAP_0092 IPR036291 NAD(P)-binding domain superfamily AMJAP_0092 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_0094 IPR006016 UspA AMJAP_0094 IPR006015 Universal stress protein A family AMJAP_0094 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0095 IPR036291 NAD(P)-binding domain superfamily AMJAP_0095 IPR007780 NAD-glutamate dehydrogenase, bacteria AMJAP_0095 IPR028971 NAD-glutamate dehydrogenase AMJAP_0096 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_0096 IPR004681 TRAP transporter large membrane protein DctM AMJAP_0099 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0099 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0099 IPR003593 AAA+ ATPase domain AMJAP_0099 IPR011006 CheY-like superfamily AMJAP_0099 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_0099 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_0099 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_0099 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_0099 IPR002197 DNA binding HTH domain, Fis-type AMJAP_0099 IPR009057 Homeobox-like domain superfamily AMJAP_0100 IPR029151 Periplasmic sensor-like domain superfamily AMJAP_0100 IPR005467 Histidine kinase domain AMJAP_0100 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0100 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AMJAP_0100 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_0100 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_0100 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_0100 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0102 IPR004680 Citrate transporter-like domain AMJAP_0102 IPR031312 Sodium/sulphate symporter, conserved site AMJAP_0102 IPR006037 Regulator of K+ conductance, C-terminal AMJAP_0102 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AMJAP_0104 IPR009051 Alpha-helical ferredoxin AMJAP_0104 IPR004017 Cysteine-rich domain AMJAP_0104 IPR012257 Glycolate oxidase, iron-sulphur subunit AMJAP_0104 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_0104 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_0105 IPR006094 FAD linked oxidase, N-terminal AMJAP_0105 IPR016164 FAD-linked oxidase-like, C-terminal AMJAP_0105 IPR016169 FAD-binding, type PCMH, subdomain 2 AMJAP_0105 IPR036318 FAD-binding, type PCMH-like superfamily AMJAP_0105 IPR016166 FAD-binding domain, PCMH-type AMJAP_0106 IPR016164 FAD-linked oxidase-like, C-terminal AMJAP_0106 IPR036318 FAD-binding, type PCMH-like superfamily AMJAP_0106 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMJAP_0106 IPR016166 FAD-binding domain, PCMH-type AMJAP_0106 IPR004490 Glycolate oxidase subunit GlcD AMJAP_0106 IPR004113 FAD-linked oxidase, C-terminal AMJAP_0106 IPR006094 FAD linked oxidase, N-terminal AMJAP_0108 IPR000847 Transcription regulator HTH, LysR AMJAP_0108 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0108 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0108 IPR005119 LysR, substrate-binding AMJAP_0112 IPR036766 Fe(II) trafficking protein YggX superfamily AMJAP_0112 IPR007457 Fe(II) trafficking protein YggX AMJAP_0113 IPR005760 A/G-specific adenine glycosylase MutY AMJAP_0113 IPR011257 DNA glycosylase AMJAP_0113 IPR004036 Endonuclease III-like, conserved site-2 AMJAP_0113 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMJAP_0113 IPR015797 NUDIX hydrolase-like domain superfamily AMJAP_0113 IPR004035 Endonuclease III, iron-sulphur binding site AMJAP_0113 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AMJAP_0113 IPR000445 Helix-hairpin-helix motif AMJAP_0113 IPR003265 HhH-GPD domain AMJAP_0113 IPR029119 MutY, C-terminal AMJAP_0115 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site AMJAP_0115 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily AMJAP_0115 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_0115 IPR000807 Imidazoleglycerol-phosphate dehydratase AMJAP_0116 IPR029062 Class I glutamine amidotransferase-like AMJAP_0116 IPR017926 Glutamine amidotransferase AMJAP_0116 IPR010139 Imidazole glycerol phosphate synthase, subunit H AMJAP_0117 IPR006062 Histidine biosynthesis AMJAP_0117 IPR004651 Histidine biosynthesis, HisF AMJAP_0117 IPR011060 Ribulose-phosphate binding barrel AMJAP_0117 IPR013785 Aldolase-type TIM barrel AMJAP_0118 IPR000796 Aspartate/other aminotransferase AMJAP_0118 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0118 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0118 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0118 IPR004839 Aminotransferase, class I/classII AMJAP_0118 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AMJAP_0120 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0120 IPR019888 Transcription regulator AsnC-type AMJAP_0120 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0120 IPR011008 Dimeric alpha-beta barrel AMJAP_0120 IPR000485 AsnC-type HTH domain AMJAP_0120 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMJAP_0120 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMJAP_0121 IPR012292 Globin/Protoglobin AMJAP_0121 IPR029787 Nucleotide cyclase AMJAP_0121 IPR039435 Diguanylate cyclase DosC, globin sensor domain AMJAP_0121 IPR000160 GGDEF domain AMJAP_0121 IPR009050 Globin-like superfamily AMJAP_0122 IPR029787 Nucleotide cyclase AMJAP_0122 IPR001633 EAL domain AMJAP_0122 IPR000160 GGDEF domain AMJAP_0122 IPR005330 MHYT domain AMJAP_0122 IPR035919 EAL domain superfamily AMJAP_0123 IPR026041 Glyoxalase ElbB AMJAP_0123 IPR029062 Class I glutamine amidotransferase-like AMJAP_0124 IPR013785 Aldolase-type TIM barrel AMJAP_0124 IPR001731 Delta-aminolevulinic acid dehydratase AMJAP_0124 IPR030656 Delta-aminolevulinic acid dehydratase, active site AMJAP_0125 IPR025200 Polyphosphate kinase C-terminal domain 2 AMJAP_0125 IPR036832 Polyphosphate kinase N-terminal domain superfamily AMJAP_0125 IPR025198 Polyphosphate kinase N-terminal domain AMJAP_0125 IPR036830 Polyphosphate kinase middle domain superfamily AMJAP_0125 IPR024953 Polyphosphate kinase middle domain AMJAP_0125 IPR003414 Polyphosphate kinase AMJAP_0125 IPR041108 Polyphosphate kinase, C-terminal domain 1 AMJAP_0126 IPR017871 ABC transporter, conserved site AMJAP_0126 IPR003439 ABC transporter-like AMJAP_0126 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0126 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AMJAP_0126 IPR003593 AAA+ ATPase domain AMJAP_0127 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter AMJAP_0127 IPR018313 Solute-binding protein family 3, conserved site AMJAP_0127 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMJAP_0128 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AMJAP_0128 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_0128 IPR035906 MetI-like superfamily AMJAP_0129 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AMJAP_0129 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_0129 IPR035906 MetI-like superfamily AMJAP_0130 IPR036291 NAD(P)-binding domain superfamily AMJAP_0130 IPR016040 NAD(P)-binding domain AMJAP_0130 IPR021295 Protein of unknown function DUF2867 AMJAP_0131 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0131 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0131 IPR000847 Transcription regulator HTH, LysR AMJAP_0131 IPR005119 LysR, substrate-binding AMJAP_0132 IPR033454 RecG, wedge domain AMJAP_0132 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0132 IPR011545 DEAD/DEAH box helicase domain AMJAP_0132 IPR012340 Nucleic acid-binding, OB-fold AMJAP_0132 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_0132 IPR004609 ATP-dependent DNA helicase RecG AMJAP_0132 IPR001650 Helicase, C-terminal AMJAP_0135 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_0135 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_0136 IPR001980 Phosphopantetheine adenylyltransferase AMJAP_0136 IPR004821 Cytidyltransferase-like domain AMJAP_0136 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0137 IPR022919 Peptidase M48, protease HtpX, putative AMJAP_0137 IPR001915 Peptidase M48 AMJAP_0138 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_0138 IPR010102 Succinate semialdehyde dehydrogenase AMJAP_0138 IPR015590 Aldehyde dehydrogenase domain AMJAP_0138 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_0138 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_0138 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_0138 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_0139 IPR004398 RNA methyltransferase, RsmD AMJAP_0139 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0139 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMJAP_0141 IPR003593 AAA+ ATPase domain AMJAP_0141 IPR036225 SRP/SRP receptor, N-terminal AMJAP_0141 IPR004390 Signal-recognition particle receptor FtsY AMJAP_0141 IPR013822 Signal recognition particle SRP54, helical bundle AMJAP_0141 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AMJAP_0141 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AMJAP_0141 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0142 IPR003593 AAA+ ATPase domain AMJAP_0142 IPR005286 Cell division protein FtsE, ATP-binding AMJAP_0142 IPR017871 ABC transporter, conserved site AMJAP_0142 IPR003439 ABC transporter-like AMJAP_0142 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0143 IPR040690 FtsX, extracellular domain AMJAP_0143 IPR004513 Cell division protein FtsX AMJAP_0144 IPR000943 RNA polymerase sigma-70 AMJAP_0144 IPR009042 RNA polymerase sigma-70 region 1.2 AMJAP_0144 IPR007627 RNA polymerase sigma-70 region 2 AMJAP_0144 IPR007630 RNA polymerase sigma-70 region 4 AMJAP_0144 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria AMJAP_0144 IPR013324 RNA polymerase sigma factor, region 3/4-like AMJAP_0144 IPR014284 RNA polymerase sigma-70 like domain AMJAP_0144 IPR013325 RNA polymerase sigma factor, region 2 AMJAP_0145 IPR006696 Protein of unknown function DUF423 AMJAP_0146 IPR008867 Thiazole synthase AMJAP_0146 IPR033983 Thiazole synthase ThiG AMJAP_0146 IPR003749 Sulfur carrier ThiS/MoaD-like AMJAP_0146 IPR010035 ThiS, thiamine-biosynthesis AMJAP_0146 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMJAP_0146 IPR012675 Beta-grasp domain superfamily AMJAP_0146 IPR013785 Aldolase-type TIM barrel AMJAP_0147 IPR013785 Aldolase-type TIM barrel AMJAP_0147 IPR033983 Thiazole synthase ThiG AMJAP_0147 IPR008867 Thiazole synthase AMJAP_0148 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0148 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type AMJAP_0151 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily AMJAP_0151 IPR001533 Pterin 4 alpha carbinolamine dehydratase AMJAP_0154 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0154 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_0154 IPR011006 CheY-like superfamily AMJAP_0154 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_0154 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0155 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0155 IPR038428 2-component histidine kinase, sensor domain superfamily AMJAP_0155 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_0155 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_0155 IPR005467 Histidine kinase domain AMJAP_0155 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0155 IPR003660 HAMP domain AMJAP_0155 IPR031930 2-component histidine kinase, sensor domain AMJAP_0155 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_0156 IPR029787 Nucleotide cyclase AMJAP_0156 IPR000014 PAS domain AMJAP_0156 IPR035919 EAL domain superfamily AMJAP_0156 IPR035965 PAS domain superfamily AMJAP_0156 IPR013656 PAS fold-4 AMJAP_0156 IPR001633 EAL domain AMJAP_0156 IPR000160 GGDEF domain AMJAP_0157 IPR007079 Succinylarginine dihydrolase AMJAP_0157 IPR037031 Succinylarginine dihydrolase superfamily AMJAP_0158 IPR017649 Succinylglutamate-semialdehyde dehydrogenase AMJAP_0158 IPR015590 Aldehyde dehydrogenase domain AMJAP_0158 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_0158 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_0158 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_0158 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_0158 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_0159 IPR017650 Arginine N-succinyltransferase AMJAP_0159 IPR016181 Acyl-CoA N-acyltransferase AMJAP_0159 IPR007041 Arginine N-succinyltransferase AstA/AruG AMJAP_0162 IPR004636 Acetylornithine/Succinylornithine transaminase family AMJAP_0162 IPR005814 Aminotransferase class-III AMJAP_0162 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0162 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0162 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0162 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria AMJAP_0163 IPR002332 Nitrogen regulatory protein P-II, urydylation site AMJAP_0163 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMJAP_0163 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMJAP_0163 IPR002187 Nitrogen regulatory protein PII AMJAP_0163 IPR017918 Nitrogen regulatory protein PII, conserved site AMJAP_0164 IPR001905 Ammonium transporter AMJAP_0164 IPR029020 Ammonium/urea transporter AMJAP_0164 IPR018047 Ammonium transporter, conserved site AMJAP_0164 IPR024041 Ammonium transporter AmtB-like domain AMJAP_0165 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMJAP_0165 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMJAP_0165 IPR002187 Nitrogen regulatory protein PII AMJAP_0165 IPR017918 Nitrogen regulatory protein PII, conserved site AMJAP_0165 IPR002332 Nitrogen regulatory protein P-II, urydylation site AMJAP_0166 IPR007475 Ubiquinone biosynthesis accessory factor UbiK AMJAP_0167 IPR035965 PAS domain superfamily AMJAP_0167 IPR000014 PAS domain AMJAP_0167 IPR000700 PAS-associated, C-terminal AMJAP_0167 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0167 IPR014285 Nitrogen fixation negative regulator NifL AMJAP_0167 IPR001610 PAC motif AMJAP_0167 IPR013767 PAS fold AMJAP_0168 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_0168 IPR000523 Magnesium chelatase ChlI domain AMJAP_0168 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0168 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_0168 IPR025158 Mg chelatase-related protein, C-terminal domain AMJAP_0168 IPR004482 Mg chelatase-related protein AMJAP_0168 IPR003593 AAA+ ATPase domain AMJAP_0169 IPR005330 MHYT domain AMJAP_0169 IPR000160 GGDEF domain AMJAP_0169 IPR035919 EAL domain superfamily AMJAP_0169 IPR001633 EAL domain AMJAP_0169 IPR029787 Nucleotide cyclase AMJAP_0170 IPR005752 ATP-dependent DNA helicase Rep AMJAP_0170 IPR000212 DNA helicase, UvrD/REP type AMJAP_0170 IPR014017 UvrD-like DNA helicase, C-terminal AMJAP_0170 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0170 IPR034739 UvrD/AddA helicase, N-terminal AMJAP_0170 IPR014016 UvrD-like helicase, ATP-binding domain AMJAP_0170 IPR013986 DExx box DNA helicase domain superfamily AMJAP_0171 IPR009056 Cytochrome c-like domain AMJAP_0171 IPR002323 Cytochrome c, class IE AMJAP_0171 IPR036909 Cytochrome c-like domain superfamily AMJAP_0172 IPR001633 EAL domain AMJAP_0172 IPR035919 EAL domain superfamily AMJAP_0172 IPR000160 GGDEF domain AMJAP_0172 IPR005330 MHYT domain AMJAP_0172 IPR029787 Nucleotide cyclase AMJAP_0173 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_0173 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_0173 IPR006508 Pseudouridine synthase, RluA-like AMJAP_0173 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMJAP_0174 IPR029787 Nucleotide cyclase AMJAP_0174 IPR000160 GGDEF domain AMJAP_0174 IPR005330 MHYT domain AMJAP_0174 IPR001633 EAL domain AMJAP_0174 IPR035919 EAL domain superfamily AMJAP_0175 IPR002477 Peptidoglycan binding-like AMJAP_0175 IPR036365 PGBD-like superfamily AMJAP_0175 IPR005490 L,D-transpeptidase catalytic domain AMJAP_0175 IPR038063 L,D-transpeptidase catalytic domain-like AMJAP_0177 IPR018062 HTH domain AraC-type, conserved site AMJAP_0177 IPR018060 DNA binding HTH domain, AraC-type AMJAP_0177 IPR020449 Transcription regulator HTH, AraC- type AMJAP_0177 IPR009057 Homeobox-like domain superfamily AMJAP_0178 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMJAP_0178 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_0178 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_0178 IPR014748 Enoyl-CoA hydratase, C-terminal AMJAP_0179 IPR020617 Thiolase, C-terminal AMJAP_0179 IPR020613 Thiolase, conserved site AMJAP_0179 IPR020616 Thiolase, N-terminal AMJAP_0179 IPR002155 Thiolase AMJAP_0179 IPR016039 Thiolase-like AMJAP_0179 IPR020610 Thiolase, active site AMJAP_0179 IPR020615 Thiolase, acyl-enzyme intermediate active site AMJAP_0180 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMJAP_0180 IPR006089 Acyl-CoA dehydrogenase, conserved site AMJAP_0180 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMJAP_0180 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMJAP_0180 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMJAP_0180 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMJAP_0180 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMJAP_0181 IPR036291 NAD(P)-binding domain superfamily AMJAP_0181 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_0181 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_0182 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_0182 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_0182 IPR000873 AMP-dependent synthetase/ligase AMJAP_0182 IPR020845 AMP-binding, conserved site AMJAP_0183 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMJAP_0183 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMJAP_0184 IPR038731 Glycosyltransferase RgtA/B/C/D-like AMJAP_0186 IPR001633 EAL domain AMJAP_0186 IPR013976 Metal-dependent hydrolase HDOD AMJAP_0186 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AMJAP_0186 IPR035919 EAL domain superfamily AMJAP_0188 IPR037237 IlvD/EDD, N-terminal domain AMJAP_0188 IPR042096 Dihydroxy-acid dehydratase, C-terminal AMJAP_0188 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site AMJAP_0188 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase AMJAP_0188 IPR004404 Dihydroxy-acid dehydratase AMJAP_0194 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0194 IPR011006 CheY-like superfamily AMJAP_0194 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_0194 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0194 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_0195 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_0195 IPR005467 Histidine kinase domain AMJAP_0195 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_0195 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_0195 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0195 IPR003660 HAMP domain AMJAP_0196 IPR036393 Acetylglutamate kinase-like superfamily AMJAP_0196 IPR016181 Acyl-CoA N-acyltransferase AMJAP_0196 IPR001048 Aspartate/glutamate/uridylate kinase AMJAP_0196 IPR000182 GNAT domain AMJAP_0196 IPR033719 N-acetylglutamate synthase, kinase-like domain AMJAP_0196 IPR010167 Amino-acid N-acetyltransferase AMJAP_0197 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AMJAP_0197 IPR036264 Bacterial exopeptidase dimerisation domain AMJAP_0197 IPR011650 Peptidase M20, dimerisation domain AMJAP_0197 IPR002933 Peptidase M20 AMJAP_0197 IPR010169 Acetylornithine deacetylase ArgE AMJAP_0198 IPR001204 Phosphate transporter AMJAP_0199 IPR038078 PhoU-like domain superfamily AMJAP_0199 IPR002727 Protein of unknown function DUF47 AMJAP_0199 IPR018445 Putative phosphate transport regulator AMJAP_0200 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AMJAP_0200 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme AMJAP_0200 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain AMJAP_0201 IPR005786 Branched-chain amino acid aminotransferase II AMJAP_0201 IPR018300 Aminotransferase, class IV, conserved site AMJAP_0201 IPR033939 Branched-chain aminotransferase AMJAP_0201 IPR001544 Aminotransferase class IV AMJAP_0201 IPR036038 Aminotransferase-like, PLP-dependent enzymes AMJAP_0202 IPR011908 Lipopolysaccharide heptosyltransferase I AMJAP_0202 IPR002201 Glycosyl transferase, family 9 AMJAP_0204 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0204 IPR001173 Glycosyltransferase 2-like AMJAP_0207 IPR002516 Glycosyl transferase, family 11 AMJAP_0208 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0208 IPR001173 Glycosyltransferase 2-like AMJAP_0209 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase AMJAP_0209 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP AMJAP_0209 IPR004960 Bacterial lipid A biosynthesis acyltransferase AMJAP_0210 IPR003593 AAA+ ATPase domain AMJAP_0210 IPR011527 ABC transporter type 1, transmembrane domain AMJAP_0210 IPR011917 ABC transporter, lipid A export, MsbA AMJAP_0210 IPR017871 ABC transporter, conserved site AMJAP_0210 IPR039421 Type I protein exporter AMJAP_0210 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0210 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMJAP_0210 IPR003439 ABC transporter-like AMJAP_0211 IPR004821 Cytidyltransferase-like domain AMJAP_0211 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site AMJAP_0211 IPR023030 Bifunctional protein HldE AMJAP_0211 IPR011913 RfaE bifunctional protein, domain I AMJAP_0211 IPR029056 Ribokinase-like AMJAP_0211 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0211 IPR011914 RfaE bifunctional protein, domain II AMJAP_0211 IPR011611 Carbohydrate kinase PfkB AMJAP_0213 IPR020471 Aldo/keto reductase AMJAP_0213 IPR036812 NADP-dependent oxidoreductase domain superfamily AMJAP_0213 IPR023210 NADP-dependent oxidoreductase domain AMJAP_0214 IPR006076 FAD dependent oxidoreductase AMJAP_0214 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_0215 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal AMJAP_0215 IPR039901 3-deoxy-D-manno-octulosonic acid transferase AMJAP_0215 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily AMJAP_0216 IPR004515 Phosphoheptose isomerase AMJAP_0216 IPR001347 Sugar isomerase (SIS) AMJAP_0216 IPR035461 GmhA/DiaA AMJAP_0217 IPR020895 Frataxin conserved site AMJAP_0217 IPR002908 Frataxin/CyaY AMJAP_0217 IPR036524 Frataxin/CyaY superfamily AMJAP_0218 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AMJAP_0218 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AMJAP_0218 IPR002986 Diaminopimelate decarboxylase, LysA AMJAP_0218 IPR000183 Ornithine/DAP/Arg decarboxylase AMJAP_0218 IPR029066 PLP-binding barrel AMJAP_0218 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMJAP_0218 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMJAP_0219 IPR018510 Diaminopimelate epimerase, active site AMJAP_0219 IPR001653 Diaminopimelate epimerase, DapF AMJAP_0221 IPR002104 Integrase, catalytic domain AMJAP_0221 IPR010998 Integrase/recombinase, N-terminal AMJAP_0221 IPR013762 Integrase-like, catalytic domain superfamily AMJAP_0221 IPR004107 Integrase, SAM-like, N-terminal AMJAP_0221 IPR011931 Tyrosine recombinase XerC AMJAP_0221 IPR023009 Tyrosine recombinase XerC/XerD AMJAP_0221 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMJAP_0225 IPR011051 RmlC-like cupin domain superfamily AMJAP_0225 IPR014710 RmlC-like jelly roll fold AMJAP_0225 IPR018062 HTH domain AraC-type, conserved site AMJAP_0225 IPR018060 DNA binding HTH domain, AraC-type AMJAP_0225 IPR009057 Homeobox-like domain superfamily AMJAP_0225 IPR020449 Transcription regulator HTH, AraC- type AMJAP_0226 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_0226 IPR036291 NAD(P)-binding domain superfamily AMJAP_0226 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_0226 IPR011283 Acetoacetyl-CoA reductase AMJAP_0228 IPR029069 HotDog domain superfamily AMJAP_0228 IPR002539 MaoC-like dehydratase domain AMJAP_0230 IPR020845 AMP-binding, conserved site AMJAP_0230 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_0230 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_0230 IPR000873 AMP-dependent synthetase/ligase AMJAP_0231 IPR005467 Histidine kinase domain AMJAP_0231 IPR000700 PAS-associated, C-terminal AMJAP_0231 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_0231 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_0231 IPR000014 PAS domain AMJAP_0231 IPR035965 PAS domain superfamily AMJAP_0231 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_0231 IPR013767 PAS fold AMJAP_0231 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0231 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0232 IPR000792 Transcription regulator LuxR, C-terminal AMJAP_0232 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0232 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0232 IPR011006 CheY-like superfamily AMJAP_0233 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AMJAP_0233 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain AMJAP_0233 IPR023546 Methylated-DNA--protein-cysteine methyltransferase AMJAP_0233 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0233 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AMJAP_0233 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site AMJAP_0233 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily AMJAP_0235 IPR034505 Anaerobic coproporphyrinogen-III oxidase AMJAP_0235 IPR010723 HemN, C-terminal AMJAP_0235 IPR006638 Elp3/MiaB/NifB AMJAP_0235 IPR004559 Heme chaperone HemW-like AMJAP_0235 IPR007197 Radical SAM AMJAP_0235 IPR023404 Radical SAM, alpha/beta horseshoe AMJAP_0236 IPR029001 Inosine triphosphate pyrophosphatase-like AMJAP_0236 IPR002637 Ham1-like protein AMJAP_0236 IPR020922 dITP/XTP pyrophosphatase AMJAP_0238 IPR008220 Homoserine/serine acetyltransferase MetX-like AMJAP_0238 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0238 IPR029058 Alpha/Beta hydrolase fold AMJAP_0238 IPR010743 Methionine biosynthesis MetW AMJAP_0238 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_0239 IPR029058 Alpha/Beta hydrolase fold AMJAP_0239 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_0239 IPR008220 Homoserine/serine acetyltransferase MetX-like AMJAP_0240 IPR005228 Conserved hypothetical protein CHP00251 AMJAP_0240 IPR003746 Protein of unknown function DUF167 AMJAP_0240 IPR036591 YggU-like superfamily AMJAP_0241 IPR003425 CCB3/YggT AMJAP_0242 IPR000304 Pyrroline-5-carboxylate reductase AMJAP_0242 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMJAP_0242 IPR036291 NAD(P)-binding domain superfamily AMJAP_0242 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain AMJAP_0242 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_0243 IPR001608 Alanine racemase, N-terminal AMJAP_0243 IPR029066 PLP-binding barrel AMJAP_0243 IPR011078 Pyridoxal phosphate homeostasis protein AMJAP_0244 IPR006321 Pilus retraction protein PilT AMJAP_0244 IPR001482 Type II/IV secretion system protein AMJAP_0244 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0244 IPR003593 AAA+ ATPase domain AMJAP_0245 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0245 IPR006321 Pilus retraction protein PilT AMJAP_0245 IPR001482 Type II/IV secretion system protein AMJAP_0246 IPR032466 Metal-dependent hydrolase AMJAP_0246 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMJAP_0246 IPR004722 Dihydroorotase AMJAP_0246 IPR006680 Amidohydrolase-related AMJAP_0247 IPR006130 Aspartate/ornithine carbamoyltransferase AMJAP_0247 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AMJAP_0247 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AMJAP_0247 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AMJAP_0247 IPR002082 Aspartate carbamoyltransferase AMJAP_0248 IPR023050 Bifunctional protein PyrR AMJAP_0248 IPR029057 Phosphoribosyltransferase-like AMJAP_0248 IPR000836 Phosphoribosyltransferase domain AMJAP_0249 IPR005227 Putative pre-16S rRNA nuclease AMJAP_0249 IPR012337 Ribonuclease H-like superfamily AMJAP_0249 IPR037027 YqgF/RNase H-like domain superfamily AMJAP_0249 IPR006641 YqgF/RNase H-like domain AMJAP_0250 IPR003774 Protein of unknown function UPF0301 AMJAP_0252 IPR004218 Prokaryotic glutathione synthetase, ATP-binding AMJAP_0252 IPR006284 Glutathione synthetase, prokaryotic AMJAP_0252 IPR004215 Prokaryotic glutathione synthetase, N-terminal AMJAP_0252 IPR011761 ATP-grasp fold AMJAP_0252 IPR013815 ATP-grasp fold, subdomain 1 AMJAP_0252 IPR016185 Pre-ATP-grasp domain superfamily AMJAP_0253 IPR029028 Alpha/beta knot methyltransferases AMJAP_0253 IPR015947 PUA-like superfamily AMJAP_0253 IPR006700 Ribosomal RNA small subunit methyltransferase E AMJAP_0253 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMJAP_0254 IPR022630 S-adenosylmethionine synthetase, C-terminal AMJAP_0254 IPR002133 S-adenosylmethionine synthetase AMJAP_0254 IPR022628 S-adenosylmethionine synthetase, N-terminal AMJAP_0254 IPR022629 S-adenosylmethionine synthetase, central domain AMJAP_0254 IPR022631 S-adenosylmethionine synthetase, conserved site AMJAP_0254 IPR022636 S-adenosylmethionine synthetase superfamily AMJAP_0255 IPR005474 Transketolase, N-terminal AMJAP_0255 IPR033247 Transketolase family AMJAP_0255 IPR033248 Transketolase, C-terminal domain AMJAP_0255 IPR020826 Transketolase binding site AMJAP_0255 IPR005478 Transketolase, bacterial-like AMJAP_0255 IPR005475 Transketolase-like, pyrimidine-binding domain AMJAP_0255 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMJAP_0255 IPR029061 Thiamin diphosphate-binding fold AMJAP_0256 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AMJAP_0256 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AMJAP_0256 IPR006422 D-erythrose-4-phosphate dehydrogenase AMJAP_0256 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AMJAP_0256 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AMJAP_0256 IPR036291 NAD(P)-binding domain superfamily AMJAP_0256 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AMJAP_0257 IPR036043 Phosphoglycerate kinase superfamily AMJAP_0257 IPR001576 Phosphoglycerate kinase AMJAP_0257 IPR015824 Phosphoglycerate kinase, N-terminal AMJAP_0257 IPR015911 Phosphoglycerate kinase, conserved site AMJAP_0258 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype AMJAP_0258 IPR013785 Aldolase-type TIM barrel AMJAP_0258 IPR000771 Fructose-bisphosphate aldolase, class-II AMJAP_0260 IPR005119 LysR, substrate-binding AMJAP_0260 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0260 IPR000847 Transcription regulator HTH, LysR AMJAP_0260 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0265 IPR005122 Uracil-DNA glycosylase-like AMJAP_0265 IPR036895 Uracil-DNA glycosylase-like domain superfamily AMJAP_0267 IPR000847 Transcription regulator HTH, LysR AMJAP_0267 IPR005119 LysR, substrate-binding AMJAP_0267 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0267 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0273 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AMJAP_0273 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AMJAP_0274 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_0274 IPR011545 DEAD/DEAH box helicase domain AMJAP_0274 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMJAP_0274 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0274 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMJAP_0274 IPR014014 RNA helicase, DEAD-box type, Q motif AMJAP_0274 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AMJAP_0274 IPR028619 ATP-dependent RNA helicase DbpA AMJAP_0274 IPR001650 Helicase, C-terminal AMJAP_0275 IPR026587 Sirtuin, class II AMJAP_0275 IPR026591 Sirtuin, catalytic core small domain superfamily AMJAP_0275 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMJAP_0275 IPR026590 Sirtuin family, catalytic core domain AMJAP_0275 IPR003000 Sirtuin family AMJAP_0276 IPR023310 Malate synthase G, beta sub-domain AMJAP_0276 IPR001465 Malate synthase AMJAP_0276 IPR006253 Malate synthase G AMJAP_0276 IPR011076 Malate synthase-like superfamily AMJAP_0279 IPR010920 LSM domain superfamily AMJAP_0279 IPR006685 Mechanosensitive ion channel MscS AMJAP_0279 IPR011066 Mechanosensitive ion channel MscS, C-terminal AMJAP_0279 IPR006686 Mechanosensitive ion channel MscS, conserved site AMJAP_0279 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AMJAP_0279 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMJAP_0279 IPR025692 Mechanosensitive ion channel inner membrane domain 1 AMJAP_0279 IPR024393 Mechanosensitive ion channel MscS, porin domain AMJAP_0281 IPR036291 NAD(P)-binding domain superfamily AMJAP_0281 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMJAP_0281 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMJAP_0281 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMJAP_0281 IPR002912 ACT domain AMJAP_0281 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMJAP_0282 IPR011051 RmlC-like cupin domain superfamily AMJAP_0282 IPR014710 RmlC-like jelly roll fold AMJAP_0282 IPR009664 Pyrimidine/purine nucleoside phosphorylase AMJAP_0283 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0283 IPR000847 Transcription regulator HTH, LysR AMJAP_0283 IPR005119 LysR, substrate-binding AMJAP_0283 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0284 IPR011701 Major facilitator superfamily AMJAP_0284 IPR020846 Major facilitator superfamily domain AMJAP_0284 IPR036259 MFS transporter superfamily AMJAP_0285 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMJAP_0285 IPR011234 Fumarylacetoacetase-like, C-terminal AMJAP_0286 IPR005265 Protoporphyrinogen oxidase HemJ-like AMJAP_0288 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0288 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMJAP_0288 IPR004033 UbiE/COQ5 methyltransferase AMJAP_0290 IPR004491 Heat shock protein HslU AMJAP_0290 IPR019489 Clp ATPase, C-terminal AMJAP_0290 IPR003959 ATPase, AAA-type, core AMJAP_0290 IPR003593 AAA+ ATPase domain AMJAP_0290 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0291 IPR029055 Nucleophile aminohydrolases, N-terminal AMJAP_0291 IPR022281 ATP-dependent protease, HslV subunit AMJAP_0291 IPR023333 Proteasome B-type subunit AMJAP_0291 IPR001353 Proteasome, subunit alpha/beta AMJAP_0293 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0293 IPR008909 DALR anticodon binding AMJAP_0293 IPR005148 Arginyl tRNA synthetase N-terminal domain AMJAP_0293 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily AMJAP_0293 IPR001278 Arginine-tRNA ligase AMJAP_0293 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMJAP_0293 IPR035684 Arginyl-tRNA synthetase, catalytic core domain AMJAP_0293 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMJAP_0294 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily AMJAP_0294 IPR041222 Primosomal protein N', 3' DNA-binding domain AMJAP_0294 IPR041236 Primosomal protein N, C-terminal domain AMJAP_0294 IPR001650 Helicase, C-terminal AMJAP_0294 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain AMJAP_0294 IPR005259 Primosomal protein N' AMJAP_0294 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0294 IPR011545 DEAD/DEAH box helicase domain AMJAP_0294 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_0295 IPR027491 Ribosomal protein L31 type A AMJAP_0295 IPR042105 Ribosomal protein L31 superfamily AMJAP_0295 IPR034704 L28p-like AMJAP_0295 IPR002150 Ribosomal protein L31 AMJAP_0296 IPR015884 Malic enzyme, conserved site AMJAP_0296 IPR001891 Malic oxidoreductase AMJAP_0296 IPR012301 Malic enzyme, N-terminal domain AMJAP_0296 IPR037062 Malic enzyme, N-terminal domain superfamily AMJAP_0296 IPR036291 NAD(P)-binding domain superfamily AMJAP_0296 IPR012302 Malic enzyme, NAD-binding AMJAP_0297 IPR031376 Penicillin-binding protein, OB-like domain AMJAP_0297 IPR001264 Glycosyl transferase, family 51 AMJAP_0297 IPR001460 Penicillin-binding protein, transpeptidase AMJAP_0297 IPR012338 Beta-lactamase/transpeptidase-like AMJAP_0297 IPR036950 Penicillin binding protein transglycosylase domain AMJAP_0297 IPR023346 Lysozyme-like domain superfamily AMJAP_0298 IPR003494 SHS2 domain inserted in FtsA AMJAP_0298 IPR005883 Type IV pilus assembly protein PilM AMJAP_0299 IPR007813 Fimbrial assembly PilN AMJAP_0300 IPR007445 Pilus assembly protein, PilO AMJAP_0300 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMJAP_0301 IPR007446 Pilus assembly protein PilP AMJAP_0302 IPR001775 GspD/PilQ family AMJAP_0302 IPR005644 NolW-like AMJAP_0302 IPR038591 NolW-like superfamily AMJAP_0302 IPR011662 Secretin/TonB, short N-terminal domain AMJAP_0302 IPR004846 Type II/III secretion system AMJAP_0302 IPR004845 Type II secretion system GspD, conserved site AMJAP_0302 IPR021731 AMIN domain AMJAP_0302 IPR013355 Type IV pilus secretin PilQ AMJAP_0303 IPR023000 Shikimate kinase, conserved site AMJAP_0303 IPR031322 Shikimate kinase/gluconokinase AMJAP_0303 IPR000623 Shikimate kinase/Threonine synthase-like 1 AMJAP_0303 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0304 IPR030960 3-dehydroquinate synthase domain AMJAP_0304 IPR016037 3-dehydroquinate synthase AroB AMJAP_0304 IPR030963 3-dehydroquinate synthase family AMJAP_0306 IPR002932 Glutamate synthase domain AMJAP_0306 IPR017932 Glutamine amidotransferase type 2 domain AMJAP_0306 IPR013785 Aldolase-type TIM barrel AMJAP_0306 IPR029055 Nucleophile aminohydrolases, N-terminal AMJAP_0306 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily AMJAP_0306 IPR002489 Glutamate synthase, alpha subunit, C-terminal AMJAP_0306 IPR006982 Glutamate synthase, central-N AMJAP_0307 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_0307 IPR023753 FAD/NAD(P)-binding domain AMJAP_0307 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 AMJAP_0307 IPR028261 Dihydroprymidine dehydrogenase domain II AMJAP_0307 IPR009051 Alpha-helical ferredoxin AMJAP_0308 IPR038071 UROD/MetE-like superfamily AMJAP_0308 IPR006361 Uroporphyrinogen decarboxylase HemE AMJAP_0308 IPR000257 Uroporphyrinogen decarboxylase (URO-D) AMJAP_0309 IPR036874 Carbonic anhydrase superfamily AMJAP_0309 IPR001765 Carbonic anhydrase AMJAP_0309 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site AMJAP_0310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0310 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0310 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase AMJAP_0310 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AMJAP_0311 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AMJAP_0311 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_0311 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0311 IPR004504 DNA repair protein RadA AMJAP_0311 IPR003593 AAA+ ATPase domain AMJAP_0311 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_0311 IPR041166 LapB, rubredoxin metal binding domain AMJAP_0312 IPR009875 PilZ domain AMJAP_0312 IPR027021 Cyclic di-GMP binding protein, PA4608 type AMJAP_0313 IPR022374 Energy-dependent translational throttle protein EttA AMJAP_0313 IPR003593 AAA+ ATPase domain AMJAP_0313 IPR032781 ABC-transporter extension domain AMJAP_0313 IPR003439 ABC transporter-like AMJAP_0313 IPR017871 ABC transporter, conserved site AMJAP_0313 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0314 IPR039429 Serine hydroxymethyltransferase-like domain AMJAP_0314 IPR001085 Serine hydroxymethyltransferase AMJAP_0314 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0314 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0314 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0314 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AMJAP_0315 IPR005144 ATP-cone domain AMJAP_0315 IPR003796 Ribonucleotide reductase regulator NrdR-like AMJAP_0316 IPR016192 APOBEC/CMP deaminase, zinc-binding AMJAP_0316 IPR002125 Cytidine and deoxycytidylate deaminase domain AMJAP_0316 IPR016193 Cytidine deaminase-like AMJAP_0316 IPR024072 Dihydrofolate reductase-like domain superfamily AMJAP_0316 IPR004794 Riboflavin biosynthesis protein RibD AMJAP_0316 IPR011549 Riboflavin-specific deaminase, C-terminal AMJAP_0316 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal AMJAP_0317 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AMJAP_0317 IPR026017 Lumazine-binding domain AMJAP_0317 IPR017938 Riboflavin synthase-like beta-barrel AMJAP_0317 IPR001783 Lumazine-binding protein AMJAP_0318 IPR036144 RibA-like superfamily AMJAP_0318 IPR032677 GTP cyclohydrolase II AMJAP_0318 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB AMJAP_0318 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMJAP_0319 IPR036467 Lumazine/riboflavin synthase superfamily AMJAP_0319 IPR034964 Lumazine synthase AMJAP_0319 IPR002180 Lumazine/riboflavin synthase AMJAP_0320 IPR035926 NusB-like superfamily AMJAP_0320 IPR006027 NusB/RsmB/TIM44 AMJAP_0320 IPR011605 NusB antitermination factor AMJAP_0321 IPR006283 Thiamine-monophosphate kinase AMJAP_0321 IPR010918 PurM-like, C-terminal domain AMJAP_0321 IPR036676 PurM-like, C-terminal domain superfamily AMJAP_0321 IPR016188 PurM-like, N-terminal domain AMJAP_0321 IPR036921 PurM-like, N-terminal domain superfamily AMJAP_0322 IPR026037 Phosphatidylglycerophosphatase A AMJAP_0322 IPR007686 YutG/PgpA domain AMJAP_0322 IPR036681 PgpA-like superfamily AMJAP_0324 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_0324 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0324 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0324 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_0324 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_0324 IPR011006 CheY-like superfamily AMJAP_0325 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_0325 IPR005467 Histidine kinase domain AMJAP_0325 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_0325 IPR003660 HAMP domain AMJAP_0325 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0325 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0326 IPR036144 RibA-like superfamily AMJAP_0326 IPR000926 GTP cyclohydrolase II, RibA AMJAP_0326 IPR032677 GTP cyclohydrolase II AMJAP_0327 IPR005477 Deoxyxylulose-5-phosphate synthase AMJAP_0327 IPR029061 Thiamin diphosphate-binding fold AMJAP_0327 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMJAP_0327 IPR033248 Transketolase, C-terminal domain AMJAP_0327 IPR020826 Transketolase binding site AMJAP_0327 IPR005475 Transketolase-like, pyrimidine-binding domain AMJAP_0328 IPR008949 Isoprenoid synthase domain superfamily AMJAP_0328 IPR000092 Polyprenyl synthetase AMJAP_0328 IPR033749 Polyprenyl synthetase, conserved site AMJAP_0329 IPR003761 Exonuclease VII, small subunit AMJAP_0329 IPR037004 Exonuclease VII, small subunit superfamily AMJAP_0330 IPR002898 MotA/TolQ/ExbB proton channel AMJAP_0330 IPR000540 Flagellar motor protein MotA, conserved site AMJAP_0331 IPR025713 Motility protein B, N-terminal domain AMJAP_0331 IPR006665 OmpA-like domain AMJAP_0331 IPR036737 OmpA-like domain superfamily AMJAP_0332 IPR002323 Cytochrome c, class IE AMJAP_0332 IPR009056 Cytochrome c-like domain AMJAP_0332 IPR036909 Cytochrome c-like domain superfamily AMJAP_0338 IPR004636 Acetylornithine/Succinylornithine transaminase family AMJAP_0338 IPR005814 Aminotransferase class-III AMJAP_0338 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0338 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0338 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0340 IPR009056 Cytochrome c-like domain AMJAP_0340 IPR036909 Cytochrome c-like domain superfamily AMJAP_0343 IPR000175 Sodium:neurotransmitter symporter AMJAP_0343 IPR037272 Sodium:neurotransmitter symporter superfamily AMJAP_0344 IPR036291 NAD(P)-binding domain superfamily AMJAP_0344 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal AMJAP_0344 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AMJAP_0344 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AMJAP_0344 IPR033524 Leu/Phe/Val dehydrogenases active site AMJAP_0344 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AMJAP_0350 IPR020081 SsrA-binding protein, conserved site AMJAP_0350 IPR000037 SsrA-binding protein AMJAP_0350 IPR023620 Small protein B AMJAP_0351 IPR037272 Sodium:neurotransmitter symporter superfamily AMJAP_0351 IPR000175 Sodium:neurotransmitter symporter AMJAP_0352 IPR005031 Coenzyme Q-binding protein COQ10, START domain AMJAP_0352 IPR023393 START-like domain superfamily AMJAP_0353 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMJAP_0353 IPR005346 RnfH protein AMJAP_0353 IPR037021 RnfH superfamily AMJAP_0354 IPR037873 BamE-like AMJAP_0354 IPR026592 Outer membrane protein assembly factor BamE AMJAP_0354 IPR007450 Lipoprotein SmpA/OmlA AMJAP_0355 IPR002481 Ferric-uptake regulator AMJAP_0355 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0355 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0356 IPR003395 RecF/RecN/SMC, N-terminal AMJAP_0356 IPR004604 DNA recombination/repair protein RecN AMJAP_0356 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0357 IPR013805 GrpE nucleotide exchange factor, coiled-coil AMJAP_0357 IPR009012 GrpE nucleotide exchange factor, head AMJAP_0357 IPR000740 GrpE nucleotide exchange factor AMJAP_0358 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AMJAP_0358 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AMJAP_0358 IPR018181 Heat shock protein 70, conserved site AMJAP_0358 IPR012725 Chaperone DnaK AMJAP_0358 IPR013126 Heat shock protein 70 family AMJAP_0359 IPR036869 Chaperone J-domain superfamily AMJAP_0359 IPR012724 Chaperone DnaJ AMJAP_0359 IPR002939 Chaperone DnaJ, C-terminal AMJAP_0359 IPR001623 DnaJ domain AMJAP_0359 IPR018253 DnaJ domain, conserved site AMJAP_0359 IPR008971 HSP40/DnaJ peptide-binding AMJAP_0359 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AMJAP_0359 IPR001305 Heat shock protein DnaJ, cysteine-rich domain AMJAP_0360 IPR018357 Hexapeptide transferase, conserved site AMJAP_0360 IPR001451 Hexapeptide repeat AMJAP_0360 IPR011004 Trimeric LpxA-like superfamily AMJAP_0360 IPR005881 Serine O-acetyltransferase AMJAP_0360 IPR042122 Serine acetyltransferase, N-terminal domain superfamily AMJAP_0360 IPR010493 Serine acetyltransferase, N-terminal AMJAP_0361 IPR022663 Dihydrodipicolinate reductase, C-terminal AMJAP_0361 IPR000846 Dihydrodipicolinate reductase, N-terminal AMJAP_0361 IPR022664 Dihydrodipicolinate reductase, conserved site AMJAP_0361 IPR023940 Dihydrodipicolinate reductase AMJAP_0361 IPR036291 NAD(P)-binding domain superfamily AMJAP_0362 IPR020911 Uncharacterised protein family UPF0325 AMJAP_0363 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AMJAP_0363 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMJAP_0363 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AMJAP_0363 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria AMJAP_0364 IPR002771 Multiple antibiotic resistance (MarC)-related AMJAP_0365 IPR000612 Proteolipid membrane potential modulator AMJAP_0368 IPR007329 FMN-binding AMJAP_0368 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_0368 IPR011399 Nitrous oxide reductase expression regulator NosR AMJAP_0370 IPR002898 MotA/TolQ/ExbB proton channel AMJAP_0371 IPR003400 Biopolymer transport protein ExbD/TolR AMJAP_0373 IPR012910 TonB-dependent receptor, plug domain AMJAP_0373 IPR037066 TonB-dependent receptor, plug domain superfamily AMJAP_0373 IPR011662 Secretin/TonB, short N-terminal domain AMJAP_0373 IPR039423 TonB-dependent receptor-like AMJAP_0373 IPR000531 TonB-dependent receptor-like, beta-barrel AMJAP_0373 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMJAP_0373 IPR010917 TonB-dependent receptor, conserved site AMJAP_0373 IPR010105 TonB-dependent siderophore receptor AMJAP_0374 IPR023735 Uncharacterised nudix hydrolase NudL AMJAP_0374 IPR000059 NUDIX hydrolase, NudL, conserved site AMJAP_0374 IPR015797 NUDIX hydrolase-like domain superfamily AMJAP_0374 IPR000086 NUDIX hydrolase domain AMJAP_0375 IPR001451 Hexapeptide repeat AMJAP_0375 IPR011004 Trimeric LpxA-like superfamily AMJAP_0377 IPR002767 Thiamine-binding protein AMJAP_0377 IPR029756 MTH1187/YkoF-like AMJAP_0378 IPR002550 CNNM, transmembrane domain AMJAP_0378 IPR000644 CBS domain AMJAP_0378 IPR036318 FAD-binding, type PCMH-like superfamily AMJAP_0378 IPR016169 FAD-binding, type PCMH, subdomain 2 AMJAP_0378 IPR005170 Transporter-associated domain AMJAP_0380 IPR004780 Signal recognition particle protein AMJAP_0380 IPR022941 Signal recognition particle, SRP54 subunit AMJAP_0380 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AMJAP_0380 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily AMJAP_0380 IPR004125 Signal recognition particle, SRP54 subunit, M-domain AMJAP_0380 IPR013822 Signal recognition particle SRP54, helical bundle AMJAP_0380 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily AMJAP_0380 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0380 IPR003593 AAA+ ATPase domain AMJAP_0381 IPR023803 Ribosomal protein S16 domain superfamily AMJAP_0381 IPR000307 Ribosomal protein S16 AMJAP_0382 IPR002676 RimM, N-terminal AMJAP_0382 IPR011961 16S rRNA processing protein RimM AMJAP_0382 IPR027275 PRC-barrel domain AMJAP_0382 IPR011033 PRC-barrel-like superfamily AMJAP_0382 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_0382 IPR036976 RimM, N-terminal domain superfamily AMJAP_0383 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMJAP_0383 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain AMJAP_0383 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal AMJAP_0383 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria AMJAP_0383 IPR029028 Alpha/beta knot methyltransferases AMJAP_0384 IPR018257 Ribosomal protein L19, conserved site AMJAP_0384 IPR001857 Ribosomal protein L19 AMJAP_0384 IPR038657 Ribosomal protein L19 superfamily AMJAP_0384 IPR008991 Translation protein SH3-like domain superfamily AMJAP_0386 IPR002104 Integrase, catalytic domain AMJAP_0386 IPR023009 Tyrosine recombinase XerC/XerD AMJAP_0386 IPR011932 Tyrosine recombinase XerD AMJAP_0386 IPR010998 Integrase/recombinase, N-terminal AMJAP_0386 IPR004107 Integrase, SAM-like, N-terminal AMJAP_0386 IPR013762 Integrase-like, catalytic domain superfamily AMJAP_0386 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMJAP_0387 IPR013766 Thioredoxin domain AMJAP_0387 IPR033954 Disulphide bond isomerase, DsbC/G AMJAP_0387 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal AMJAP_0387 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily AMJAP_0387 IPR036249 Thioredoxin-like superfamily AMJAP_0387 IPR017937 Thioredoxin, conserved site AMJAP_0387 IPR012336 Thioredoxin-like fold AMJAP_0388 IPR036291 NAD(P)-binding domain superfamily AMJAP_0388 IPR019811 Homoserine dehydrogenase, conserved site AMJAP_0388 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding AMJAP_0388 IPR002912 ACT domain AMJAP_0388 IPR016204 Homoserine dehydrogenase AMJAP_0388 IPR001342 Homoserine dehydrogenase, catalytic AMJAP_0389 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMJAP_0389 IPR029144 Threonine synthase, N-terminal AMJAP_0389 IPR037158 Threonine synthase, N-terminal domain superfamily AMJAP_0389 IPR004450 Threonine synthase-like AMJAP_0389 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMJAP_0389 IPR001926 Pyridoxal-phosphate dependent enzyme AMJAP_0391 IPR041122 RecJ, OB domain AMJAP_0391 IPR003156 DHHA1 domain AMJAP_0391 IPR038763 DHH phosphoesterase superfamily AMJAP_0391 IPR001667 DDH domain AMJAP_0391 IPR004610 Bacterial RecJ exonuclease AMJAP_0393 IPR013022 Xylose isomerase-like, TIM barrel domain AMJAP_0393 IPR018246 AP endonuclease 2, zinc binding site AMJAP_0393 IPR036237 Xylose isomerase-like superfamily AMJAP_0393 IPR001719 AP endonuclease 2 AMJAP_0394 IPR037026 Vgr protein, OB-fold domain superfamily AMJAP_0394 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AMJAP_0394 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AMJAP_0394 IPR006531 Gp5 N-terminal AMJAP_0395 IPR027379 Cardiolipin synthase N-terminal AMJAP_0395 IPR001736 Phospholipase D/Transphosphatidylase AMJAP_0395 IPR022924 Cardiolipin synthase AMJAP_0395 IPR030874 Cardiolipin synthase, Firmicutes-type AMJAP_0395 IPR025202 Phospholipase D-like domain AMJAP_0401 IPR002645 STAS domain AMJAP_0401 IPR001902 SLC26A/SulP transporter AMJAP_0401 IPR011547 SLC26A/SulP transporter domain AMJAP_0401 IPR036513 STAS domain superfamily AMJAP_0402 IPR020084 NUDIX hydrolase, conserved site AMJAP_0402 IPR004385 Nucleoside diphosphate pyrophosphatase AMJAP_0402 IPR015797 NUDIX hydrolase-like domain superfamily AMJAP_0402 IPR000086 NUDIX hydrolase domain AMJAP_0403 IPR009659 Protein of unknown function DUF1249 AMJAP_0404 IPR029052 Metallo-dependent phosphatase-like AMJAP_0404 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA AMJAP_0404 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMJAP_0405 IPR029058 Alpha/Beta hydrolase fold AMJAP_0405 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA AMJAP_0406 IPR006171 TOPRIM domain AMJAP_0406 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 AMJAP_0406 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal AMJAP_0406 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMJAP_0406 IPR001241 DNA topoisomerase, type IIA AMJAP_0406 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_0406 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0406 IPR002288 DNA gyrase B subunit, C-terminal AMJAP_0406 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_0406 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0406 IPR018522 DNA topoisomerase, type IIA, conserved site AMJAP_0406 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative AMJAP_0407 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AMJAP_0407 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMJAP_0407 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AMJAP_0407 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMJAP_0407 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AMJAP_0407 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative AMJAP_0407 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AMJAP_0408 IPR000110 Ribosomal protein S1 AMJAP_0408 IPR012340 Nucleic acid-binding, OB-fold AMJAP_0408 IPR022967 RNA-binding domain, S1 AMJAP_0408 IPR003029 S1 domain AMJAP_0411 IPR001123 Amino acid exporter protein, LeuE-type AMJAP_0412 IPR002781 Transmembrane protein TauE-like AMJAP_0414 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_0414 IPR012134 Glutamate-5-semialdehyde dehydrogenase AMJAP_0414 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site AMJAP_0414 IPR000965 GPR domain AMJAP_0414 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_0414 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_0414 IPR015590 Aldehyde dehydrogenase domain AMJAP_0415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0415 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase AMJAP_0415 IPR004821 Cytidyltransferase-like domain AMJAP_0416 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMJAP_0417 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMJAP_0417 IPR029028 Alpha/beta knot methyltransferases AMJAP_0417 IPR003742 RNA methyltransferase RlmH AMJAP_0418 IPR001460 Penicillin-binding protein, transpeptidase AMJAP_0418 IPR036138 Penicillin-binding protein, dimerisation domain superfamily AMJAP_0418 IPR005311 Penicillin-binding protein, dimerisation domain AMJAP_0418 IPR017790 Penicillin-binding protein 2 AMJAP_0418 IPR012338 Beta-lactamase/transpeptidase-like AMJAP_0419 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AMJAP_0419 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA AMJAP_0419 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB AMJAP_0420 IPR023346 Lysozyme-like domain superfamily AMJAP_0420 IPR031304 Transglycosylase SLT domain 2 AMJAP_0420 IPR011757 Lytic transglycosylase MltB AMJAP_0421 IPR007730 Sporulation-like domain AMJAP_0421 IPR034718 Endolytic peptidoglycan transglycosylase RlpA AMJAP_0421 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMJAP_0421 IPR036908 RlpA-like domain superfamily AMJAP_0421 IPR012997 Rare lipoprotein A AMJAP_0421 IPR036680 Sporulation-like domain superfamily AMJAP_0422 IPR012338 Beta-lactamase/transpeptidase-like AMJAP_0422 IPR015956 Penicillin-binding protein, C-terminal domain superfamily AMJAP_0422 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AMJAP_0422 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal AMJAP_0422 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily AMJAP_0422 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AMJAP_0423 IPR001544 Aminotransferase class IV AMJAP_0423 IPR005784 D-amino acid aminotransferase AMJAP_0423 IPR036038 Aminotransferase-like, PLP-dependent enzymes AMJAP_0423 IPR018300 Aminotransferase, class IV, conserved site AMJAP_0424 IPR027471 YbeD-like domain superfamily AMJAP_0424 IPR007454 Uncharacterised protein family UPF0250 AMJAP_0425 IPR000544 Octanoyltransferase AMJAP_0425 IPR020605 Octanoyltransferase, conserved site AMJAP_0425 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AMJAP_0426 IPR003698 Lipoyl synthase AMJAP_0426 IPR007197 Radical SAM AMJAP_0426 IPR006638 Elp3/MiaB/NifB AMJAP_0426 IPR031691 Lipoyl synthase, N-terminal AMJAP_0426 IPR013785 Aldolase-type TIM barrel AMJAP_0428 IPR001173 Glycosyltransferase 2-like AMJAP_0428 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0429 IPR003342 Glycosyl transferase family 39/83 AMJAP_0429 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase AMJAP_0430 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMJAP_0430 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMJAP_0434 IPR037422 HTH-type transcriptional regulator BlaA, PBP2 domain AMJAP_0434 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0434 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0434 IPR000847 Transcription regulator HTH, LysR AMJAP_0434 IPR005119 LysR, substrate-binding AMJAP_0436 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AMJAP_0436 IPR010372 DNA polymerase III delta, N-terminal AMJAP_0436 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0436 IPR032780 DNA polymerase III subunit delta, C-terminal AMJAP_0436 IPR005790 DNA polymerase III, delta subunit AMJAP_0438 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AMJAP_0438 IPR025709 Leucyl-tRNA synthetase, editing domain AMJAP_0438 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMJAP_0438 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AMJAP_0438 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0438 IPR002300 Aminoacyl-tRNA synthetase, class Ia AMJAP_0438 IPR002302 Leucine-tRNA ligase AMJAP_0438 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMJAP_0440 IPR004563 Apolipoprotein N-acyltransferase AMJAP_0440 IPR036526 Carbon-nitrogen hydrolase superfamily AMJAP_0440 IPR003010 Carbon-nitrogen hydrolase AMJAP_0441 IPR005170 Transporter-associated domain AMJAP_0441 IPR016169 FAD-binding, type PCMH, subdomain 2 AMJAP_0441 IPR036318 FAD-binding, type PCMH-like superfamily AMJAP_0441 IPR000644 CBS domain AMJAP_0442 IPR002036 Endoribonuclease YbeY AMJAP_0442 IPR023091 Metalloprotease catalytic domain superfamily, predicted AMJAP_0443 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0443 IPR003714 PhoH-like protein AMJAP_0444 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB AMJAP_0444 IPR038135 Methylthiotransferase, N-terminal domain superfamily AMJAP_0444 IPR013848 Methylthiotransferase, N-terminal AMJAP_0444 IPR002792 TRAM domain AMJAP_0444 IPR020612 Methylthiotransferase, conserved site AMJAP_0444 IPR007197 Radical SAM AMJAP_0444 IPR005839 Methylthiotransferase AMJAP_0444 IPR023404 Radical SAM, alpha/beta horseshoe AMJAP_0444 IPR006638 Elp3/MiaB/NifB AMJAP_0446 IPR008523 Protein of unknown function DUF805 AMJAP_0447 IPR000160 GGDEF domain AMJAP_0447 IPR013656 PAS fold-4 AMJAP_0447 IPR035919 EAL domain superfamily AMJAP_0447 IPR029787 Nucleotide cyclase AMJAP_0447 IPR001633 EAL domain AMJAP_0447 IPR035965 PAS domain superfamily AMJAP_0447 IPR000014 PAS domain AMJAP_0448 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain AMJAP_0448 IPR013377 Peptidoglycan hydrolase FlgJ AMJAP_0448 IPR019301 Flagellar protein FlgJ, N-terminal AMJAP_0449 IPR007197 Radical SAM AMJAP_0449 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase AMJAP_0449 IPR022462 Lysine-2,3-aminomutase-like AMJAP_0449 IPR013785 Aldolase-type TIM barrel AMJAP_0450 IPR015365 Elongation factor P, C-terminal AMJAP_0450 IPR012340 Nucleic acid-binding, OB-fold AMJAP_0450 IPR014722 Ribosomal protein L2, domain 2 AMJAP_0450 IPR020599 Translation elongation factor P/YeiP AMJAP_0450 IPR013185 Translation elongation factor, KOW-like AMJAP_0450 IPR001059 Translation elongation factor P/YeiP, central AMJAP_0450 IPR008991 Translation protein SH3-like domain superfamily AMJAP_0450 IPR011768 Translation elongation factor P AMJAP_0450 IPR013852 Translation elongation factor P/YeiP, conserved site AMJAP_0451 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMJAP_0451 IPR006195 Aminoacyl-tRNA synthetase, class II AMJAP_0451 IPR004525 Elongation factor P--(R)-beta-lysine ligase AMJAP_0451 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AMJAP_0452 IPR000160 GGDEF domain AMJAP_0452 IPR029787 Nucleotide cyclase AMJAP_0452 IPR001633 EAL domain AMJAP_0452 IPR005330 MHYT domain AMJAP_0452 IPR035919 EAL domain superfamily AMJAP_0454 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0454 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0454 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0454 IPR004839 Aminotransferase, class I/classII AMJAP_0455 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AMJAP_0455 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AMJAP_0455 IPR013785 Aldolase-type TIM barrel AMJAP_0455 IPR000891 Pyruvate carboxyltransferase AMJAP_0455 IPR005671 2-isopropylmalate synthase, bacterial-type AMJAP_0455 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AMJAP_0457 IPR006464 N-acetyltransferase RimI/Ard1 AMJAP_0457 IPR016181 Acyl-CoA N-acyltransferase AMJAP_0457 IPR000182 GNAT domain AMJAP_0459 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0459 IPR011006 CheY-like superfamily AMJAP_0460 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0460 IPR005467 Histidine kinase domain AMJAP_0460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_0460 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_0460 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_0462 IPR004161 Translation elongation factor EFTu-like, domain 2 AMJAP_0462 IPR000795 Transcription factor, GTP-binding domain AMJAP_0462 IPR005225 Small GTP-binding protein domain AMJAP_0462 IPR035647 EF-G domain III/V-like AMJAP_0462 IPR031157 Tr-type G domain, conserved site AMJAP_0462 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0462 IPR004548 Peptide chain release factor 3 AMJAP_0462 IPR041732 Peptide chain release factor 3, GTP-binding domain AMJAP_0462 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily AMJAP_0462 IPR032090 Peptide chain release factor 3, C-terminal AMJAP_0462 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_0463 IPR032466 Metal-dependent hydrolase AMJAP_0463 IPR001130 TatD family AMJAP_0463 IPR018228 Deoxyribonuclease, TatD-related, conserved site AMJAP_0465 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMJAP_0465 IPR000794 Beta-ketoacyl synthase AMJAP_0465 IPR014030 Beta-ketoacyl synthase, N-terminal AMJAP_0465 IPR014031 Beta-ketoacyl synthase, C-terminal AMJAP_0465 IPR016039 Thiolase-like AMJAP_0466 IPR006664 Outer membrane protein, bacterial AMJAP_0466 IPR006665 OmpA-like domain AMJAP_0466 IPR039567 Glycine zipper domain AMJAP_0466 IPR036737 OmpA-like domain superfamily AMJAP_0466 IPR006690 Outer membrane protein, OmpA-like, conserved site AMJAP_0471 IPR003607 HD/PDEase domain AMJAP_0471 IPR002912 ACT domain AMJAP_0471 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme AMJAP_0471 IPR006674 HD domain AMJAP_0471 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase AMJAP_0471 IPR002934 Polymerase, nucleotidyl transferase domain AMJAP_0472 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 AMJAP_0472 IPR001714 Peptidase M24, methionine aminopeptidase AMJAP_0472 IPR000994 Peptidase M24 AMJAP_0472 IPR036005 Creatinase/aminopeptidase-like AMJAP_0473 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AMJAP_0473 IPR018130 Ribosomal protein S2, conserved site AMJAP_0473 IPR001865 Ribosomal protein S2 AMJAP_0473 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid AMJAP_0474 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation AMJAP_0474 IPR018101 Translation elongation factor Ts, conserved site AMJAP_0474 IPR036402 Elongation factor Ts, dimerisation domain superfamily AMJAP_0474 IPR009060 UBA-like superfamily AMJAP_0474 IPR001816 Translation elongation factor EFTs/EF1B AMJAP_0475 IPR015963 Uridylate kinase, bacteria AMJAP_0475 IPR011817 Uridylate kinase AMJAP_0475 IPR001048 Aspartate/glutamate/uridylate kinase AMJAP_0475 IPR036393 Acetylglutamate kinase-like superfamily AMJAP_0476 IPR023584 Ribosome recycling factor domain AMJAP_0476 IPR036191 RRF superfamily AMJAP_0476 IPR002661 Ribosome recycling factor AMJAP_0477 IPR001441 Decaprenyl diphosphate synthase-like AMJAP_0477 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site AMJAP_0477 IPR036424 Decaprenyl diphosphate synthase-like superfamily AMJAP_0478 IPR000374 Phosphatidate cytidylyltransferase AMJAP_0479 IPR036034 PDZ superfamily AMJAP_0479 IPR041489 PDZ domain 6 AMJAP_0479 IPR001478 PDZ domain AMJAP_0479 IPR008915 Peptidase M50 AMJAP_0479 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase AMJAP_0480 IPR010827 POTRA domain, BamA/TamA-like AMJAP_0480 IPR039910 Surface antigen D15-like AMJAP_0480 IPR023707 Outer membrane protein assembly factor BamA AMJAP_0480 IPR000184 Bacterial surface antigen (D15) AMJAP_0480 IPR034746 POTRA domain AMJAP_0482 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region AMJAP_0482 IPR011004 Trimeric LpxA-like superfamily AMJAP_0482 IPR001451 Hexapeptide repeat AMJAP_0482 IPR018357 Hexapeptide transferase, conserved site AMJAP_0482 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD AMJAP_0483 IPR029069 HotDog domain superfamily AMJAP_0483 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ AMJAP_0483 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AMJAP_0484 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal AMJAP_0484 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily AMJAP_0484 IPR011004 Trimeric LpxA-like superfamily AMJAP_0484 IPR001451 Hexapeptide repeat AMJAP_0484 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase AMJAP_0485 IPR003835 Glycosyl transferase, family 19 AMJAP_0486 IPR012337 Ribonuclease H-like superfamily AMJAP_0486 IPR024567 Ribonuclease HII/HIII domain AMJAP_0486 IPR001352 Ribonuclease HII/HIII AMJAP_0486 IPR022898 Ribonuclease HII AMJAP_0486 IPR036397 Ribonuclease H superfamily AMJAP_0487 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain AMJAP_0487 IPR040982 DNA polymerase III alpha subunit finger domain AMJAP_0487 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMJAP_0487 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMJAP_0487 IPR004013 PHP domain AMJAP_0487 IPR016195 Polymerase/histidinol phosphatase-like AMJAP_0487 IPR004805 DNA polymerase III, alpha subunit AMJAP_0487 IPR029460 DNA polymerase, helix-hairpin-helix motif AMJAP_0487 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AMJAP_0488 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AMJAP_0488 IPR001095 Acetyl-CoA carboxylase, alpha subunit AMJAP_0488 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_0489 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0489 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain AMJAP_0489 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal AMJAP_0489 IPR012094 tRNA(Ile)-lysidine synthase AMJAP_0489 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMJAP_0489 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal AMJAP_0490 IPR017926 Glutamine amidotransferase AMJAP_0490 IPR017456 CTP synthase, N-terminal AMJAP_0490 IPR004468 CTP synthase AMJAP_0490 IPR029062 Class I glutamine amidotransferase-like AMJAP_0490 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0490 IPR033828 CTP synthase GATase domain AMJAP_0491 IPR020810 Enolase, C-terminal TIM barrel domain AMJAP_0491 IPR000941 Enolase AMJAP_0491 IPR036849 Enolase-like, C-terminal domain superfamily AMJAP_0491 IPR020811 Enolase, N-terminal AMJAP_0491 IPR020809 Enolase, conserved site AMJAP_0491 IPR029017 Enolase-like, N-terminal AMJAP_0492 IPR023081 Cell division protein FtsB AMJAP_0492 IPR007060 Septum formation initiator FtsL/DivIC AMJAP_0493 IPR042214 Pseudouridine synthase, TruD, catalytic domain AMJAP_0493 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_0493 IPR001656 Pseudouridine synthase, TruD AMJAP_0493 IPR011760 Pseudouridine synthase, TruD, insertion domain AMJAP_0493 IPR020119 Pseudouridine synthase TruD, conserved site AMJAP_0494 IPR030048 Survival protein SurE AMJAP_0494 IPR002828 Survival protein SurE-like phosphatase/nucleotidase AMJAP_0494 IPR036523 SurE-like phosphatase/nucleotidase superfamily AMJAP_0495 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase AMJAP_0495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0497 IPR016047 Peptidase M23 AMJAP_0497 IPR036779 LysM domain superfamily AMJAP_0497 IPR018392 LysM domain AMJAP_0497 IPR011055 Duplicated hybrid motif AMJAP_0498 IPR007624 RNA polymerase sigma-70 region 3 AMJAP_0498 IPR014284 RNA polymerase sigma-70 like domain AMJAP_0498 IPR013325 RNA polymerase sigma factor, region 2 AMJAP_0498 IPR000943 RNA polymerase sigma-70 AMJAP_0498 IPR013324 RNA polymerase sigma factor, region 3/4-like AMJAP_0498 IPR009042 RNA polymerase sigma-70 region 1.2 AMJAP_0498 IPR007630 RNA polymerase sigma-70 region 4 AMJAP_0498 IPR007627 RNA polymerase sigma-70 region 2 AMJAP_0498 IPR012761 RNA polymerase sigma factor RpoS AMJAP_0498 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0499 IPR007696 DNA mismatch repair protein MutS, core AMJAP_0499 IPR016151 DNA mismatch repair protein MutS, N-terminal AMJAP_0499 IPR007861 DNA mismatch repair protein MutS, clamp AMJAP_0499 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AMJAP_0499 IPR017261 DNA mismatch repair protein MutS/MSH AMJAP_0499 IPR007695 DNA mismatch repair protein MutS-like, N-terminal AMJAP_0499 IPR005748 DNA mismatch repair protein MutS AMJAP_0499 IPR007860 DNA mismatch repair protein MutS, connector domain AMJAP_0499 IPR000432 DNA mismatch repair protein MutS, C-terminal AMJAP_0499 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0499 IPR036678 MutS, connector domain superfamily AMJAP_0500 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0500 IPR001173 Glycosyltransferase 2-like AMJAP_0505 IPR019554 Soluble ligand binding domain AMJAP_0505 IPR003715 Polysaccharide export protein AMJAP_0507 IPR003593 AAA+ ATPase domain AMJAP_0507 IPR003439 ABC transporter-like AMJAP_0507 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0507 IPR017871 ABC transporter, conserved site AMJAP_0508 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD AMJAP_0509 IPR036291 NAD(P)-binding domain superfamily AMJAP_0509 IPR016040 NAD(P)-binding domain AMJAP_0509 IPR005888 dTDP-glucose 4,6-dehydratase AMJAP_0510 IPR005913 dTDP-4-dehydrorhamnose reductase family AMJAP_0510 IPR036291 NAD(P)-binding domain superfamily AMJAP_0510 IPR029903 RmlD-like substrate binding domain AMJAP_0511 IPR005835 Nucleotidyl transferase domain AMJAP_0511 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0511 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form AMJAP_0512 IPR011051 RmlC-like cupin domain superfamily AMJAP_0512 IPR014710 RmlC-like jelly roll fold AMJAP_0512 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related AMJAP_0513 IPR001173 Glycosyltransferase 2-like AMJAP_0513 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0513 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0515 IPR007833 Capsule polysaccharide biosynthesis AMJAP_0516 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_0516 IPR036291 NAD(P)-binding domain superfamily AMJAP_0516 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_0517 IPR007833 Capsule polysaccharide biosynthesis AMJAP_0518 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0518 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type AMJAP_0518 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0518 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AMJAP_0518 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0518 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type AMJAP_0518 IPR004839 Aminotransferase, class I/classII AMJAP_0519 IPR020843 Polyketide synthase, enoylreductase domain AMJAP_0519 IPR018201 Beta-ketoacyl synthase, active site AMJAP_0519 IPR014031 Beta-ketoacyl synthase, C-terminal AMJAP_0519 IPR014030 Beta-ketoacyl synthase, N-terminal AMJAP_0519 IPR013154 Alcohol dehydrogenase, N-terminal AMJAP_0519 IPR036736 ACP-like superfamily AMJAP_0519 IPR011032 GroES-like superfamily AMJAP_0519 IPR013968 Polyketide synthase, ketoreductase domain AMJAP_0519 IPR042104 Polyketide synthase, dehydratase domain superfamily AMJAP_0519 IPR014043 Acyl transferase AMJAP_0519 IPR032821 Ketoacyl-synthetase, C-terminal extension AMJAP_0519 IPR036291 NAD(P)-binding domain superfamily AMJAP_0519 IPR006162 Phosphopantetheine attachment site AMJAP_0519 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMJAP_0519 IPR020807 Polyketide synthase, dehydratase domain AMJAP_0519 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMJAP_0519 IPR009081 Phosphopantetheine binding ACP domain AMJAP_0519 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMJAP_0519 IPR016039 Thiolase-like AMJAP_0519 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMJAP_0520 IPR036396 Cytochrome P450 superfamily AMJAP_0520 IPR001128 Cytochrome P450 AMJAP_0520 IPR002401 Cytochrome P450, E-class, group I AMJAP_0520 IPR017972 Cytochrome P450, conserved site AMJAP_0522 IPR008136 CinA, C-terminal AMJAP_0522 IPR036653 CinA-like, C-terminal AMJAP_0523 IPR003593 AAA+ ATPase domain AMJAP_0523 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0523 IPR020584 DNA recombination/repair protein RecA, conserved site AMJAP_0523 IPR023400 DNA recombination and repair protein RecA, C-terminal AMJAP_0523 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface AMJAP_0523 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain AMJAP_0523 IPR013765 DNA recombination and repair protein RecA AMJAP_0524 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0524 IPR003783 Regulatory protein RecX AMJAP_0525 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_0525 IPR003156 DHHA1 domain AMJAP_0525 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily AMJAP_0525 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain AMJAP_0525 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AMJAP_0525 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AMJAP_0525 IPR002318 Alanine-tRNA ligase, class IIc AMJAP_0525 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria AMJAP_0525 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal AMJAP_0526 IPR005260 Aspartate kinase, monofunctional class AMJAP_0526 IPR036393 Acetylglutamate kinase-like superfamily AMJAP_0526 IPR041740 Aspartokinase catalytic domain AMJAP_0526 IPR001341 Aspartate kinase AMJAP_0526 IPR018042 Aspartate kinase, conserved site AMJAP_0526 IPR001048 Aspartate/glutamate/uridylate kinase AMJAP_0526 IPR027795 CASTOR, ACT domain AMJAP_0526 IPR002912 ACT domain AMJAP_0527 IPR003751 Translational regulator CsrA AMJAP_0527 IPR036107 Carbon storage regulator superfamily AMJAP_0528 IPR010129 Type I secretion membrane fusion protein, HlyD family AMJAP_0528 IPR006144 Secretion protein HlyD, conserved site AMJAP_0529 IPR003593 AAA+ ATPase domain AMJAP_0529 IPR039421 Type I protein exporter AMJAP_0529 IPR039395 Peptidase C39-like A AMJAP_0529 IPR005074 Peptidase C39, bacteriocin processing AMJAP_0529 IPR011527 ABC transporter type 1, transmembrane domain AMJAP_0529 IPR010132 ATPase, type I secretion system, HlyB AMJAP_0529 IPR017871 ABC transporter, conserved site AMJAP_0529 IPR003439 ABC transporter-like AMJAP_0529 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0529 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMJAP_0530 IPR005074 Peptidase C39, bacteriocin processing AMJAP_0530 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0530 IPR010132 ATPase, type I secretion system, HlyB AMJAP_0530 IPR017871 ABC transporter, conserved site AMJAP_0530 IPR039395 Peptidase C39-like A AMJAP_0530 IPR003439 ABC transporter-like AMJAP_0530 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMJAP_0530 IPR011527 ABC transporter type 1, transmembrane domain AMJAP_0530 IPR003593 AAA+ ATPase domain AMJAP_0530 IPR039421 Type I protein exporter AMJAP_0532 IPR026340 Thiazole biosynthesis domain AMJAP_0532 IPR036873 Rhodanese-like domain superfamily AMJAP_0532 IPR001763 Rhodanese-like domain AMJAP_0532 IPR004114 THUMP domain AMJAP_0532 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0532 IPR020536 Thil, AANH domain AMJAP_0532 IPR003720 tRNA sulfurtransferase ThiI AMJAP_0533 IPR005899 Sodium ion-translocating decarboxylase AMJAP_0533 IPR023424 Oxaloacetate decarboxylase gamma chain, probable AMJAP_0534 IPR001882 Biotin-binding site AMJAP_0534 IPR011053 Single hybrid motif AMJAP_0534 IPR000891 Pyruvate carboxyltransferase AMJAP_0534 IPR005776 Oxaloacetate decarboxylase, alpha subunit AMJAP_0534 IPR003379 Carboxylase, conserved domain AMJAP_0534 IPR000089 Biotin/lipoyl attachment AMJAP_0534 IPR013785 Aldolase-type TIM barrel AMJAP_0535 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit AMJAP_0536 IPR037138 Histone deacetylase domain superfamily AMJAP_0536 IPR023801 Histone deacetylase domain AMJAP_0536 IPR000286 Histone deacetylase family AMJAP_0536 IPR023696 Ureohydrolase domain superfamily AMJAP_0537 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_0537 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0537 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_0537 IPR011006 CheY-like superfamily AMJAP_0537 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0542 IPR024181 Chemotaxis response regulator CheV AMJAP_0542 IPR002545 CheW-like domain AMJAP_0542 IPR011006 CheY-like superfamily AMJAP_0542 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0542 IPR036061 CheW-like domain superfamily AMJAP_0543 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal AMJAP_0543 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal AMJAP_0543 IPR026024 Chemotaxis protein methyltransferase CheR AMJAP_0543 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0543 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily AMJAP_0543 IPR000780 MCP methyltransferase, CheR-type AMJAP_0544 IPR019776 Flagellar basal body rod protein, conserved site AMJAP_0544 IPR006300 Flagellar basal-body rod protein FlgB AMJAP_0544 IPR001444 Flagellar basal body rod protein, N-terminal AMJAP_0545 IPR006299 Flagellar basal-body rod protein FlgC AMJAP_0545 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMJAP_0545 IPR019776 Flagellar basal body rod protein, conserved site AMJAP_0545 IPR001444 Flagellar basal body rod protein, N-terminal AMJAP_0546 IPR005648 Flagellar hook capping protein AMJAP_0547 IPR001444 Flagellar basal body rod protein, N-terminal AMJAP_0547 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMJAP_0547 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMJAP_0547 IPR037058 Flagellar hook protein FlgE superfamily AMJAP_0547 IPR011491 Flagellar hook protein FlgE AMJAP_0547 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMJAP_0547 IPR019776 Flagellar basal body rod protein, conserved site AMJAP_0548 IPR019776 Flagellar basal body rod protein, conserved site AMJAP_0548 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMJAP_0548 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMJAP_0548 IPR001444 Flagellar basal body rod protein, N-terminal AMJAP_0548 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMJAP_0549 IPR012834 Flagellar basal-body rod FlgG AMJAP_0549 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like AMJAP_0549 IPR001444 Flagellar basal body rod protein, N-terminal AMJAP_0549 IPR019776 Flagellar basal body rod protein, conserved site AMJAP_0549 IPR020013 Flagellar hook-basal body protein, FlgE/F/G AMJAP_0549 IPR010930 Flagellar basal-body/hook protein, C-terminal domain AMJAP_0550 IPR000527 Flagellar L-ring protein AMJAP_0551 IPR001782 Flagellar P-ring protein AMJAP_0552 IPR019301 Flagellar protein FlgJ, N-terminal AMJAP_0552 IPR013377 Peptidoglycan hydrolase FlgJ AMJAP_0552 IPR023346 Lysozyme-like domain superfamily AMJAP_0552 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain AMJAP_0554 IPR001029 Flagellin, D0/D1 domain AMJAP_0554 IPR013384 Flagellar hook-associated protein 3 AMJAP_0555 IPR003713 Flagellar protein FliS AMJAP_0555 IPR036584 Flagellar protein FliS superfamily AMJAP_0556 IPR010810 Flagellin hook, IN motif AMJAP_0556 IPR040026 Flagellar hook-associated protein 2 AMJAP_0556 IPR010809 Flagellar hook-associated protein 2, C-terminal AMJAP_0556 IPR003481 Flagellar hook-associated protein 2, N-terminal AMJAP_0558 IPR001492 Flagellin AMJAP_0558 IPR001029 Flagellin, D0/D1 domain AMJAP_0558 IPR010810 Flagellin hook, IN motif AMJAP_0559 IPR002197 DNA binding HTH domain, Fis-type AMJAP_0559 IPR011006 CheY-like superfamily AMJAP_0559 IPR010518 Flagellar regulatory FleQ AMJAP_0559 IPR003593 AAA+ ATPase domain AMJAP_0559 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_0559 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_0559 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_0559 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_0559 IPR009057 Homeobox-like domain superfamily AMJAP_0559 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0560 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0560 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_0560 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0560 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_0560 IPR035965 PAS domain superfamily AMJAP_0560 IPR000014 PAS domain AMJAP_0560 IPR005467 Histidine kinase domain AMJAP_0560 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_0561 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0561 IPR002197 DNA binding HTH domain, Fis-type AMJAP_0561 IPR009057 Homeobox-like domain superfamily AMJAP_0561 IPR011006 CheY-like superfamily AMJAP_0561 IPR003593 AAA+ ATPase domain AMJAP_0561 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0561 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_0561 IPR029995 Transcriptional activator SfnR/FlbD AMJAP_0561 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_0561 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_0561 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_0562 IPR000873 AMP-dependent synthetase/ligase AMJAP_0562 IPR020845 AMP-binding, conserved site AMJAP_0562 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_0562 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AMJAP_0562 IPR011904 Acetate-CoA ligase AMJAP_0562 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_0563 IPR011006 CheY-like superfamily AMJAP_0563 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_0563 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0563 IPR000792 Transcription regulator LuxR, C-terminal AMJAP_0565 IPR030856 Sensor histidine kinase RcsC AMJAP_0565 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0565 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0565 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal AMJAP_0565 IPR011006 CheY-like superfamily AMJAP_0565 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_0565 IPR038388 RcsC, C-terminal domain superfamily AMJAP_0565 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_0565 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_0565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0565 IPR005467 Histidine kinase domain AMJAP_0567 IPR019899 Sodium/solute symporter, VC2705 subfamily AMJAP_0567 IPR001734 Sodium/solute symporter AMJAP_0567 IPR038377 Sodium/glucose symporter superfamily AMJAP_0569 IPR013520 Exonuclease, RNase T/DNA polymerase III AMJAP_0569 IPR012337 Ribonuclease H-like superfamily AMJAP_0569 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type AMJAP_0569 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMJAP_0569 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain AMJAP_0569 IPR012340 Nucleic acid-binding, OB-fold AMJAP_0569 IPR004013 PHP domain AMJAP_0569 IPR029460 DNA polymerase, helix-hairpin-helix motif AMJAP_0569 IPR024754 DNA polymerase III polC-like, N-terminal domain II AMJAP_0569 IPR036397 Ribonuclease H superfamily AMJAP_0569 IPR040982 DNA polymerase III alpha subunit finger domain AMJAP_0569 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain AMJAP_0570 IPR001624 Flagellar hook-basal body complex protein FliE AMJAP_0571 IPR000067 Flagellar M-ring protein FliF AMJAP_0571 IPR013556 Flagellar M-ring C-terminal AMJAP_0571 IPR006182 Secretory protein YscJ/FliF AMJAP_0572 IPR000090 Flagellar motor switch protein FliG AMJAP_0572 IPR028263 Flagellar motor switch protein FliG, N-terminal domain AMJAP_0572 IPR032779 Flagellar motor switch protein FliG, middle domain AMJAP_0572 IPR011002 Flagellar motor switch protein FliG, alpha-helical AMJAP_0572 IPR023087 Flagellar motor switch protein FliG, C-terminal AMJAP_0574 IPR040627 T3SS EscN ATPase, C-terminal AMJAP_0574 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0574 IPR020005 Flagellar export ATPase FliI, clade 1 AMJAP_0574 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AMJAP_0574 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMJAP_0574 IPR032463 ATPase, type III secretion system, FliI AMJAP_0574 IPR005714 ATPase, type III secretion system, FliI/YscN AMJAP_0574 IPR003593 AAA+ ATPase domain AMJAP_0576 IPR001635 Flagellar hook-length control protein FliK AMJAP_0576 IPR021136 Flagellar hook-length control protein-like, C-terminal AMJAP_0576 IPR038610 FliK-like, C-terminal domain superfamily AMJAP_0578 IPR001689 Flagellar motor switch protein FliM AMJAP_0578 IPR001543 Surface presentation of antigen (SpoA) AMJAP_0578 IPR036429 SpoA-like superfamily AMJAP_0578 IPR028976 CheC-like superfamily AMJAP_0579 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb AMJAP_0579 IPR001543 Surface presentation of antigen (SpoA) AMJAP_0579 IPR036429 SpoA-like superfamily AMJAP_0579 IPR012826 Flagellar motor switch FliN AMJAP_0580 IPR022781 Flagellar biosynthesis protein, FliO AMJAP_0581 IPR005837 Flagellar transport protein FliP AMJAP_0581 IPR005838 Type III secretion system inner membrane P protein AMJAP_0582 IPR006305 Flagellar biosynthesis protein FliQ AMJAP_0582 IPR002191 Bacterial export protein family 3 AMJAP_0583 IPR002010 Type III secretion system inner membrane R protein AMJAP_0583 IPR006303 Flagellar biosynthesis protein FliR AMJAP_0584 IPR029025 Type III secretion system substrate exporter, C-terminal AMJAP_0584 IPR006135 Type III secretion system substrate exporter AMJAP_0584 IPR006136 Flagellar biosynthetic protein FlhB AMJAP_0585 IPR006301 Flagellar biosynthesis protein FlhA AMJAP_0585 IPR001712 Type III secretion system FHIPEP AMJAP_0585 IPR042196 FHIPEP, domain 4 AMJAP_0585 IPR042194 FHIPEP, domain 1 AMJAP_0585 IPR042193 FHIPEP, domain 3 AMJAP_0585 IPR025505 FHIPEP conserved site AMJAP_0586 IPR003593 AAA+ ATPase domain AMJAP_0586 IPR020006 Flagellar biosynthesis protein FlhF AMJAP_0586 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0586 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain AMJAP_0587 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMJAP_0587 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0587 IPR025501 ATP binding protein MinD AMJAP_0588 IPR007624 RNA polymerase sigma-70 region 3 AMJAP_0588 IPR007630 RNA polymerase sigma-70 region 4 AMJAP_0588 IPR014284 RNA polymerase sigma-70 like domain AMJAP_0588 IPR028617 RNA polymerase sigma factor FliA AMJAP_0588 IPR013324 RNA polymerase sigma factor, region 3/4-like AMJAP_0588 IPR013325 RNA polymerase sigma factor, region 2 AMJAP_0588 IPR012845 RNA polymerase sigma factor, FliA/WhiG AMJAP_0588 IPR007627 RNA polymerase sigma-70 region 2 AMJAP_0588 IPR000943 RNA polymerase sigma-70 AMJAP_0589 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0589 IPR011006 CheY-like superfamily AMJAP_0590 IPR007439 Chemotaxis phosphatase, CheZ AMJAP_0591 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0591 IPR005467 Histidine kinase domain AMJAP_0591 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_0591 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0591 IPR036061 CheW-like domain superfamily AMJAP_0591 IPR035891 CheY-binding domain of CheA AMJAP_0591 IPR002545 CheW-like domain AMJAP_0591 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding AMJAP_0591 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily AMJAP_0591 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily AMJAP_0591 IPR004105 Histidine kinase CheA-like, homodimeric domain AMJAP_0591 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_0591 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AMJAP_0591 IPR036641 HPT domain superfamily AMJAP_0592 IPR035909 Methylesterase CheB, C-terminal AMJAP_0592 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase AMJAP_0592 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0592 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type AMJAP_0592 IPR011006 CheY-like superfamily AMJAP_0593 IPR000540 Flagellar motor protein MotA, conserved site AMJAP_0593 IPR002898 MotA/TolQ/ExbB proton channel AMJAP_0594 IPR006665 OmpA-like domain AMJAP_0594 IPR036737 OmpA-like domain superfamily AMJAP_0594 IPR025713 Motility protein B, N-terminal domain AMJAP_0595 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0595 IPR025669 AAA domain AMJAP_0598 IPR029025 Type III secretion system substrate exporter, C-terminal AMJAP_0598 IPR006136 Flagellar biosynthetic protein FlhB AMJAP_0598 IPR006135 Type III secretion system substrate exporter AMJAP_0600 IPR003439 ABC transporter-like AMJAP_0600 IPR005895 ABC transporter, haem export, CcmA AMJAP_0600 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0600 IPR003593 AAA+ ATPase domain AMJAP_0601 IPR003544 Cytochrome c-type biogenesis protein CcmB AMJAP_0601 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria AMJAP_0602 IPR002541 Cytochrome c assembly protein AMJAP_0602 IPR003557 Cytochrome c-type biogenesis protein CcmC AMJAP_0604 IPR036127 CcmE-like superfamily AMJAP_0604 IPR004329 CcmE/CycJ protein AMJAP_0605 IPR003567 Cytochrome c-type biogenesis protein AMJAP_0605 IPR003568 Cytochrome c-type biogenesis protein CcmF AMJAP_0605 IPR002541 Cytochrome c assembly protein AMJAP_0605 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AMJAP_0606 IPR013740 Redoxin AMJAP_0606 IPR017937 Thioredoxin, conserved site AMJAP_0606 IPR036249 Thioredoxin-like superfamily AMJAP_0606 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE AMJAP_0606 IPR013766 Thioredoxin domain AMJAP_0607 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AMJAP_0607 IPR005616 CcmH/CycL/Ccl2/NrfF family AMJAP_0608 IPR017560 Cytochrome c-type biogenesis protein CcmI AMJAP_0608 IPR013026 Tetratricopeptide repeat-containing domain AMJAP_0608 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_0608 IPR019734 Tetratricopeptide repeat AMJAP_0609 IPR011919 Cell division protein ZipA AMJAP_0609 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily AMJAP_0609 IPR007449 ZipA, C-terminal FtsZ-binding domain AMJAP_0609 IPR007449 ZipA, C-terminal FtsZ-binding domain AMJAP_0609 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily AMJAP_0609 IPR011919 Cell division protein ZipA AMJAP_0610 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMJAP_0610 IPR013840 NAD-dependent DNA ligase, N-terminal AMJAP_0610 IPR012340 Nucleic acid-binding, OB-fold AMJAP_0610 IPR001679 NAD-dependent DNA ligase AMJAP_0610 IPR001357 BRCT domain AMJAP_0610 IPR036420 BRCT domain superfamily AMJAP_0610 IPR041663 DisA/LigA, helix-hairpin-helix motif AMJAP_0610 IPR018239 NAD-dependent DNA ligase, active site AMJAP_0610 IPR033136 NAD-dependent DNA ligase, conserved site AMJAP_0610 IPR013839 NAD-dependent DNA ligase, adenylation AMJAP_0610 IPR004150 NAD-dependent DNA ligase, OB-fold AMJAP_0610 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type AMJAP_0610 IPR010994 RuvA domain 2-like AMJAP_0612 IPR010648 Uncharacterised protein family UPF0270 AMJAP_0612 IPR036685 YehU-like superfamily AMJAP_0615 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_0615 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC AMJAP_0615 IPR008471 MnmC-like methyltransferase AMJAP_0615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0615 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal AMJAP_0615 IPR006076 FAD dependent oxidoreductase AMJAP_0616 IPR006368 GDP-mannose 4,6-dehydratase AMJAP_0616 IPR036291 NAD(P)-binding domain superfamily AMJAP_0616 IPR016040 NAD(P)-binding domain AMJAP_0617 IPR001509 NAD-dependent epimerase/dehydratase AMJAP_0617 IPR036291 NAD(P)-binding domain superfamily AMJAP_0617 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase AMJAP_0618 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0618 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase AMJAP_0618 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0618 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0619 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0619 IPR001173 Glycosyltransferase 2-like AMJAP_0619 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA AMJAP_0622 IPR002516 Glycosyl transferase, family 11 AMJAP_0623 IPR001509 NAD-dependent epimerase/dehydratase AMJAP_0623 IPR036291 NAD(P)-binding domain superfamily AMJAP_0623 IPR005886 UDP-glucose 4-epimerase AMJAP_0624 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0624 IPR001173 Glycosyltransferase 2-like AMJAP_0625 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0625 IPR001173 Glycosyltransferase 2-like AMJAP_0626 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0627 IPR001509 NAD-dependent epimerase/dehydratase AMJAP_0627 IPR036291 NAD(P)-binding domain superfamily AMJAP_0628 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMJAP_0628 IPR003362 Bacterial sugar transferase AMJAP_0628 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP AMJAP_0629 IPR036291 NAD(P)-binding domain superfamily AMJAP_0629 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain AMJAP_0629 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0630 IPR007631 RNA polymerase sigma factor 70, non-essential domain AMJAP_0630 IPR028630 RNA polymerase sigma factor RpoD AMJAP_0630 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0630 IPR007624 RNA polymerase sigma-70 region 3 AMJAP_0630 IPR042189 Sigma-70 factor, region 1.1 superfamily AMJAP_0630 IPR013325 RNA polymerase sigma factor, region 2 AMJAP_0630 IPR013324 RNA polymerase sigma factor, region 3/4-like AMJAP_0630 IPR007127 RNA polymerase sigma factor 70, region 1.1 AMJAP_0630 IPR007630 RNA polymerase sigma-70 region 4 AMJAP_0630 IPR007627 RNA polymerase sigma-70 region 2 AMJAP_0630 IPR014284 RNA polymerase sigma-70 like domain AMJAP_0630 IPR012760 RNA polymerase sigma factor RpoD, C-terminal AMJAP_0630 IPR009042 RNA polymerase sigma-70 region 1.2 AMJAP_0630 IPR000943 RNA polymerase sigma-70 AMJAP_0631 IPR006171 TOPRIM domain AMJAP_0631 IPR006295 DNA primase, DnaG AMJAP_0631 IPR036977 DNA Primase, CHC2-type zinc finger AMJAP_0631 IPR030846 DNA primase DnaG, bacteria AMJAP_0631 IPR019475 DNA primase, DnaB-helicase binding domain AMJAP_0631 IPR013264 DNA primase, catalytic core, N-terminal AMJAP_0631 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AMJAP_0631 IPR013173 DNA primase DnaG, DnaB-binding domain AMJAP_0631 IPR002694 Zinc finger, CHC2-type AMJAP_0631 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMJAP_0631 IPR034151 Bacterial DnaG primase, TOPRIM domain AMJAP_0633 IPR018278 Ribosomal protein S21, conserved site AMJAP_0633 IPR001911 Ribosomal protein S21 AMJAP_0633 IPR038380 Ribosomal protein S21 superfamily AMJAP_0634 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD AMJAP_0634 IPR000905 Gcp-like domain AMJAP_0634 IPR017861 Kae1/TsaD family AMJAP_0635 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY AMJAP_0638 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK AMJAP_0638 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily AMJAP_0639 IPR007156 LemA AMJAP_0639 IPR023353 LemA-like domain superfamily AMJAP_0640 IPR001915 Peptidase M48 AMJAP_0640 IPR022919 Peptidase M48, protease HtpX, putative AMJAP_0641 IPR036291 NAD(P)-binding domain superfamily AMJAP_0641 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_0641 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_0641 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMJAP_0642 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AMJAP_0642 IPR002646 Poly A polymerase, head domain AMJAP_0642 IPR006674 HD domain AMJAP_0642 IPR003607 HD/PDEase domain AMJAP_0642 IPR012006 tRNA nucleotidyltransferase, proteobacteria AMJAP_0643 IPR036873 Rhodanese-like domain superfamily AMJAP_0643 IPR023695 Thiosulfate sulfurtransferase, bacterial AMJAP_0643 IPR001763 Rhodanese-like domain AMJAP_0644 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) AMJAP_0644 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMJAP_0644 IPR029052 Metallo-dependent phosphatase-like AMJAP_0645 IPR007474 ApaG domain AMJAP_0645 IPR023065 Uncharacterised protein family ApaG AMJAP_0645 IPR036767 ApaG domain superfamily AMJAP_0646 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0646 IPR011530 Ribosomal RNA adenine dimethylase AMJAP_0646 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal AMJAP_0646 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site AMJAP_0646 IPR023165 rRNA adenine dimethylase-like AMJAP_0646 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMJAP_0647 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase AMJAP_0647 IPR005255 PdxA family AMJAP_0648 IPR027304 Trigger factor/SurA domain superfamily AMJAP_0648 IPR015391 SurA N-terminal AMJAP_0648 IPR023034 Peptidyl-prolyl isomerase SurA AMJAP_0648 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AMJAP_0649 IPR020889 LPS-assembly protein LptD AMJAP_0649 IPR007543 LptD, C-terminal AMJAP_0649 IPR005653 Organic solvent tolerance-like, N-terminal AMJAP_0650 IPR011009 Protein kinase-like domain superfamily AMJAP_0650 IPR002575 Aminoglycoside phosphotransferase AMJAP_0651 IPR005835 Nucleotidyl transferase domain AMJAP_0651 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0652 IPR023749 Co-chaperone DjlA AMJAP_0652 IPR007791 Co-chaperone DjlA, N-terminal AMJAP_0652 IPR036869 Chaperone J-domain superfamily AMJAP_0652 IPR001623 DnaJ domain AMJAP_0652 IPR029024 TerB-like AMJAP_0654 IPR011060 Ribulose-phosphate binding barrel AMJAP_0654 IPR026019 Ribulose-phosphate 3-epimerase AMJAP_0654 IPR000056 Ribulose-phosphate 3-epimerase-like AMJAP_0654 IPR013785 Aldolase-type TIM barrel AMJAP_0655 IPR041492 Haloacid dehalogenase-like hydrolase AMJAP_0655 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AMJAP_0655 IPR037512 Phosphoglycolate phosphatase, prokaryotic AMJAP_0655 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMJAP_0655 IPR006439 HAD hydrolase, subfamily IA AMJAP_0655 IPR036412 HAD-like superfamily AMJAP_0655 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AMJAP_0655 IPR023214 HAD superfamily AMJAP_0656 IPR005119 LysR, substrate-binding AMJAP_0656 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0656 IPR000847 Transcription regulator HTH, LysR AMJAP_0656 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0657 IPR006805 Anthranilate synthase component I, N-terminal AMJAP_0657 IPR015890 Chorismate-utilising enzyme, C-terminal AMJAP_0657 IPR019999 Anthranilate synthase component I-like AMJAP_0657 IPR005801 ADC synthase AMJAP_0657 IPR005256 Anthranilate synthase component I, PabB-like AMJAP_0659 IPR013686 Polypeptide-transport-associated, ShlB-type AMJAP_0659 IPR005565 Haemolysin activator HlyB, C-terminal AMJAP_0659 IPR034746 POTRA domain AMJAP_0664 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath AMJAP_0666 IPR010272 Type VI secretion system, TssF-like AMJAP_0668 IPR003959 ATPase, AAA-type, core AMJAP_0668 IPR018368 ClpA/B, conserved site 1 AMJAP_0668 IPR003593 AAA+ ATPase domain AMJAP_0668 IPR041546 ClpA/ClpB, AAA lid domain AMJAP_0668 IPR017729 Type VI secretion system, ATPase ClpV1 AMJAP_0668 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0668 IPR004176 Clp, N-terminal AMJAP_0668 IPR036628 Clp, N-terminal domain superfamily AMJAP_0668 IPR019489 Clp ATPase, C-terminal AMJAP_0668 IPR001270 ClpA/B family AMJAP_0669 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_0669 IPR003018 GAF domain AMJAP_0669 IPR003593 AAA+ ATPase domain AMJAP_0669 IPR029016 GAF-like domain superfamily AMJAP_0669 IPR009057 Homeobox-like domain superfamily AMJAP_0669 IPR002197 DNA binding HTH domain, Fis-type AMJAP_0669 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0669 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_0669 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_0669 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_0670 IPR037026 Vgr protein, OB-fold domain superfamily AMJAP_0670 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein AMJAP_0670 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset AMJAP_0670 IPR006531 Gp5 N-terminal AMJAP_0678 IPR036624 Hcp1-like superfamily AMJAP_0678 IPR008514 Type VI secretion system effector, Hcp AMJAP_0680 IPR010263 Type VI secretion protein, VC_A0114 AMJAP_0681 IPR036737 OmpA-like domain superfamily AMJAP_0681 IPR025713 Motility protein B, N-terminal domain AMJAP_0681 IPR006665 OmpA-like domain AMJAP_0682 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0682 IPR010623 Type VI secretion system IcmF, C-terminal AMJAP_0682 IPR025743 IcmF-related, N-terminal domain AMJAP_0682 IPR009612 IcmF-related AMJAP_0682 IPR017731 Type VI secretion system, IcmF AMJAP_0684 IPR015655 Protein phosphatase 2C family AMJAP_0684 IPR036457 PPM-type phosphatase domain superfamily AMJAP_0684 IPR001932 PPM-type phosphatase domain AMJAP_0685 IPR000719 Protein kinase domain AMJAP_0685 IPR017441 Protein kinase, ATP binding site AMJAP_0685 IPR005543 PASTA domain AMJAP_0685 IPR008271 Serine/threonine-protein kinase, active site AMJAP_0685 IPR011009 Protein kinase-like domain superfamily AMJAP_0687 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMJAP_0687 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0687 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMJAP_0688 IPR023187 Transcriptional regulator MarR-type, conserved site AMJAP_0688 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0688 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0688 IPR000835 MarR-type HTH domain AMJAP_0690 IPR035906 MetI-like superfamily AMJAP_0690 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_0691 IPR003439 ABC transporter-like AMJAP_0691 IPR017871 ABC transporter, conserved site AMJAP_0691 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0691 IPR000644 CBS domain AMJAP_0691 IPR005892 Glycine betaine transport ATP-binding subunit AMJAP_0691 IPR003593 AAA+ ATPase domain AMJAP_0692 IPR008535 Protein of unknown function DUF817 AMJAP_0696 IPR005119 LysR, substrate-binding AMJAP_0696 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0696 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0696 IPR000847 Transcription regulator HTH, LysR AMJAP_0697 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_0697 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_0697 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_0697 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_0697 IPR015590 Aldehyde dehydrogenase domain AMJAP_0697 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_0698 IPR032466 Metal-dependent hydrolase AMJAP_0698 IPR008257 Peptidase M19 AMJAP_0699 IPR000060 BCCT transporter family AMJAP_0702 IPR018668 DNA-binding protein VF530-like AMJAP_0702 IPR036361 SAP domain superfamily AMJAP_0704 IPR006157 Dihydroneopterin aldolase/epimerase domain AMJAP_0712 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain AMJAP_0712 IPR017926 Glutamine amidotransferase AMJAP_0712 IPR029062 Class I glutamine amidotransferase-like AMJAP_0713 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AMJAP_0713 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AMJAP_0713 IPR005940 Anthranilate phosphoribosyl transferase AMJAP_0713 IPR000312 Glycosyl transferase, family 3 AMJAP_0713 IPR017459 Glycosyl transferase family 3, N-terminal domain AMJAP_0714 IPR001468 Indole-3-glycerol phosphate synthase, conserved site AMJAP_0714 IPR013798 Indole-3-glycerol phosphate synthase AMJAP_0714 IPR013785 Aldolase-type TIM barrel AMJAP_0714 IPR011060 Ribulose-phosphate binding barrel AMJAP_0715 IPR003718 OsmC/Ohr family AMJAP_0715 IPR036102 OsmC/Ohr superfamily AMJAP_0715 IPR015946 K homology domain-like, alpha/beta AMJAP_0716 IPR000868 Isochorismatase-like AMJAP_0716 IPR036380 Isochorismatase-like superfamily AMJAP_0717 IPR009057 Homeobox-like domain superfamily AMJAP_0717 IPR029062 Class I glutamine amidotransferase-like AMJAP_0717 IPR018060 DNA binding HTH domain, AraC-type AMJAP_0717 IPR002818 DJ-1/PfpI AMJAP_0719 IPR020814 Ribosomal protein S6, plastid/chloroplast AMJAP_0719 IPR020815 Ribosomal protein S6, conserved site AMJAP_0719 IPR000529 Ribosomal protein S6 AMJAP_0719 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMJAP_0719 IPR035980 Ribosomal protein S6 superfamily AMJAP_0720 IPR036870 Ribosomal protein S18 superfamily AMJAP_0720 IPR001648 Ribosomal protein S18 AMJAP_0720 IPR018275 Ribosomal protein S18, conserved site AMJAP_0721 IPR020069 Ribosomal protein L9, C-terminal AMJAP_0721 IPR020594 Ribosomal protein L9, bacteria/chloroplast AMJAP_0721 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMJAP_0721 IPR000244 Ribosomal protein L9 AMJAP_0721 IPR020070 Ribosomal protein L9, N-terminal AMJAP_0721 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AMJAP_0721 IPR036935 Ribosomal protein L9, N-terminal domain superfamily AMJAP_0722 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMJAP_0722 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily AMJAP_0722 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0722 IPR007693 DNA helicase, DnaB-like, N-terminal AMJAP_0722 IPR007694 DNA helicase, DnaB-like, C-terminal AMJAP_0722 IPR007692 DNA helicase, DnaB type AMJAP_0722 IPR003593 AAA+ ATPase domain AMJAP_0724 IPR014122 Demethylmenaquinone methyltransferase AMJAP_0724 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0724 IPR004033 UbiE/COQ5 methyltransferase AMJAP_0724 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMJAP_0727 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0727 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0727 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA AMJAP_0727 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0727 IPR005814 Aminotransferase class-III AMJAP_0729 IPR036414 YaeB, N-terminal domain superfamily AMJAP_0729 IPR036413 YaeB-like superfamily AMJAP_0729 IPR040372 YaeB-like AMJAP_0729 IPR023368 Uncharacterised protein family UPF0066, conserved site AMJAP_0729 IPR041369 TrmO, C-terminal AMJAP_0729 IPR023370 TrmO-like, N-terminal domain AMJAP_0731 IPR000836 Phosphoribosyltransferase domain AMJAP_0731 IPR029057 Phosphoribosyltransferase-like AMJAP_0731 IPR005222 Competence protein ComF AMJAP_0732 IPR006638 Elp3/MiaB/NifB AMJAP_0732 IPR024177 Biotin synthase AMJAP_0732 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB AMJAP_0732 IPR007197 Radical SAM AMJAP_0732 IPR010722 Biotin and thiamin synthesis-associated domain AMJAP_0732 IPR013785 Aldolase-type TIM barrel AMJAP_0733 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria AMJAP_0733 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0733 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0733 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0733 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type AMJAP_0733 IPR004839 Aminotransferase, class I/classII AMJAP_0733 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AMJAP_0734 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_0734 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase AMJAP_0734 IPR029058 Alpha/Beta hydrolase fold AMJAP_0735 IPR029058 Alpha/Beta hydrolase fold AMJAP_0735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0735 IPR013216 Methyltransferase type 11 AMJAP_0735 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC AMJAP_0735 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_0736 IPR004472 Dethiobiotin synthase BioD AMJAP_0736 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0742 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AMJAP_0742 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AMJAP_0742 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AMJAP_0742 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AMJAP_0745 IPR005119 LysR, substrate-binding AMJAP_0745 IPR037415 Octopine catabolism/uptake operon regulatory protein OccR, PBP2 domain AMJAP_0745 IPR000847 Transcription regulator HTH, LysR AMJAP_0745 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0745 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0747 IPR004681 TRAP transporter large membrane protein DctM AMJAP_0747 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_0747 IPR007387 TRAP transporter, small membrane protein DctQ AMJAP_0748 IPR038404 TRAP transporter solute receptor DctP superfamily AMJAP_0748 IPR004682 TRAP transporter solute receptor, DctP family AMJAP_0748 IPR018389 TRAP transporter solute receptor DctP/TeaA AMJAP_0749 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMJAP_0749 IPR036010 2Fe-2S ferredoxin-like superfamily AMJAP_0749 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal AMJAP_0750 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B AMJAP_0750 IPR023753 FAD/NAD(P)-binding domain AMJAP_0750 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_0750 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMJAP_0750 IPR007419 BFD-like [2Fe-2S]-binding domain AMJAP_0751 IPR006076 FAD dependent oxidoreductase AMJAP_0751 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_0751 IPR012727 Glycine oxidase ThiO AMJAP_0752 IPR006175 YjgF/YER057c/UK114 family AMJAP_0752 IPR035959 RutC-like superfamily AMJAP_0752 IPR035709 RutC family, YoaB-like AMJAP_0752 IPR019897 RidA, conserved site AMJAP_0753 IPR029058 Alpha/Beta hydrolase fold AMJAP_0753 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_0754 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily AMJAP_0754 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AMJAP_0754 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMJAP_0756 IPR025824 OB-fold nucleic acid binding domain AMJAP_0756 IPR020579 Exonuclease VII, large subunit, C-terminal AMJAP_0756 IPR003753 Exonuclease VII, large subunit AMJAP_0757 IPR015875 IMP dehydrogenase / GMP reductase, conserved site AMJAP_0757 IPR013785 Aldolase-type TIM barrel AMJAP_0757 IPR000644 CBS domain AMJAP_0757 IPR005990 Inosine-5'-monophosphate dehydrogenase AMJAP_0757 IPR001093 IMP dehydrogenase/GMP reductase AMJAP_0758 IPR022310 NAD/GMP synthase AMJAP_0758 IPR025777 GMP synthetase ATP pyrophosphatase domain AMJAP_0758 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0758 IPR029062 Class I glutamine amidotransferase-like AMJAP_0758 IPR017926 Glutamine amidotransferase AMJAP_0758 IPR001674 GMP synthase, C-terminal AMJAP_0758 IPR004739 GMP synthase, glutamine amidotransferase AMJAP_0758 IPR022955 GMP synthase AMJAP_0759 IPR002656 Acyltransferase 3 AMJAP_0760 IPR002656 Acyltransferase 3 AMJAP_0760 IPR036514 SGNH hydrolase superfamily AMJAP_0761 IPR016192 APOBEC/CMP deaminase, zinc-binding AMJAP_0761 IPR028883 tRNA-specific adenosine deaminase AMJAP_0761 IPR016193 Cytidine deaminase-like AMJAP_0761 IPR002125 Cytidine and deoxycytidylate deaminase domain AMJAP_0762 IPR000834 Peptidase M14, carboxypeptidase A AMJAP_0763 IPR023703 Membrane-bound lytic murein transglycosylase F AMJAP_0763 IPR023346 Lysozyme-like domain superfamily AMJAP_0763 IPR008258 Transglycosylase SLT domain 1 AMJAP_0763 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMJAP_0764 IPR029062 Class I glutamine amidotransferase-like AMJAP_0764 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal AMJAP_0764 IPR017926 Glutamine amidotransferase AMJAP_0764 IPR036921 PurM-like, N-terminal domain superfamily AMJAP_0764 IPR010073 Phosphoribosylformylglycinamidine synthase PurL AMJAP_0764 IPR010918 PurM-like, C-terminal domain AMJAP_0764 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily AMJAP_0764 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain AMJAP_0764 IPR036676 PurM-like, C-terminal domain superfamily AMJAP_0767 IPR000498 Outer membrane protein OmpA-like, transmembrane domain AMJAP_0767 IPR006690 Outer membrane protein, OmpA-like, conserved site AMJAP_0767 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMJAP_0767 IPR006664 Outer membrane protein, bacterial AMJAP_0767 IPR002368 Outer membrane protein, OmpA AMJAP_0767 IPR036737 OmpA-like domain superfamily AMJAP_0767 IPR006665 OmpA-like domain AMJAP_0768 IPR011008 Dimeric alpha-beta barrel AMJAP_0768 IPR005545 YCII-related AMJAP_0769 IPR006008 Intracellular septation protein A AMJAP_0770 IPR016195 Polymerase/histidinol phosphatase-like AMJAP_0770 IPR004013 PHP domain AMJAP_0770 IPR003141 Polymerase/histidinol phosphatase, N-terminal AMJAP_0771 IPR006070 YrdC-like domain AMJAP_0771 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AMJAP_0772 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily AMJAP_0772 IPR027444 Histone-like protein H-NS, C-terminal domain AMJAP_0772 IPR001801 Histone-like protein H-NS AMJAP_0772 IPR027454 Histone-like protein H-NS, N-terminal AMJAP_0773 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AMJAP_0773 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_0773 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_0773 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AMJAP_0773 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AMJAP_0773 IPR002942 RNA-binding S4 domain AMJAP_0773 IPR036986 RNA-binding S4 domain superfamily AMJAP_0774 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_0774 IPR036291 NAD(P)-binding domain superfamily AMJAP_0774 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_0775 IPR036412 HAD-like superfamily AMJAP_0775 IPR006439 HAD hydrolase, subfamily IA AMJAP_0775 IPR041492 Haloacid dehalogenase-like hydrolase AMJAP_0775 IPR023214 HAD superfamily AMJAP_0775 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMJAP_0775 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AMJAP_0776 IPR010233 Ubiquinone biosynthesis O-methyltransferase AMJAP_0776 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0777 IPR005743 DNA gyrase, subunit A AMJAP_0777 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat AMJAP_0777 IPR013760 DNA topoisomerase, type IIA-like domain superfamily AMJAP_0777 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal AMJAP_0777 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta AMJAP_0777 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily AMJAP_0777 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AMJAP_0778 IPR022278 Phosphoserine aminotransferase AMJAP_0778 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0778 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMJAP_0778 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0778 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0778 IPR000192 Aminotransferase class V domain AMJAP_0779 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain AMJAP_0779 IPR002701 Chorismate mutase II, prokaryotic-type AMJAP_0779 IPR018528 Prephenate dehydratase, conserved site AMJAP_0779 IPR036263 Chorismate mutase type II superfamily AMJAP_0779 IPR036979 Chorismate mutase domain superfamily AMJAP_0779 IPR001086 Prephenate dehydratase AMJAP_0779 IPR002912 ACT domain AMJAP_0779 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase AMJAP_0780 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AMJAP_0780 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_0780 IPR004839 Aminotransferase, class I/classII AMJAP_0780 IPR005861 Histidinol-phosphate aminotransferase family AMJAP_0780 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_0780 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_0781 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AMJAP_0781 IPR001986 Enolpyruvate transferase domain AMJAP_0781 IPR036968 Enolpyruvate transferase domain superfamily AMJAP_0781 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase AMJAP_0781 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site AMJAP_0782 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0782 IPR003136 Cytidylate kinase AMJAP_0782 IPR011994 Cytidylate kinase domain AMJAP_0783 IPR003029 S1 domain AMJAP_0783 IPR000110 Ribosomal protein S1 AMJAP_0783 IPR012340 Nucleic acid-binding, OB-fold AMJAP_0783 IPR022967 RNA-binding domain, S1 AMJAP_0784 IPR000119 Histone-like DNA-binding protein AMJAP_0784 IPR020816 Histone-like DNA-binding protein, conserved site AMJAP_0784 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AMJAP_0784 IPR005685 Integration host factor, beta subunit AMJAP_0786 IPR041166 LapB, rubredoxin metal binding domain AMJAP_0786 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_0786 IPR013026 Tetratricopeptide repeat-containing domain AMJAP_0786 IPR030865 Lipopolysaccharide assembly protein B AMJAP_0786 IPR019734 Tetratricopeptide repeat AMJAP_0787 IPR011060 Ribulose-phosphate binding barrel AMJAP_0787 IPR001754 Orotidine 5'-phosphate decarboxylase domain AMJAP_0787 IPR014732 Orotidine 5'-phosphate decarboxylase AMJAP_0787 IPR018089 Orotidine 5'-phosphate decarboxylase, active site AMJAP_0787 IPR013785 Aldolase-type TIM barrel AMJAP_0788 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMJAP_0788 IPR004509 Competence protein ComEA, helix-hairpin-helix domain AMJAP_0788 IPR010994 RuvA domain 2-like AMJAP_0790 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily AMJAP_0790 IPR003732 D-aminoacyl-tRNA deacylase DTD AMJAP_0791 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_0791 IPR029058 Alpha/Beta hydrolase fold AMJAP_0791 IPR002410 Peptidase S33 AMJAP_0791 IPR005944 Proline iminopeptidase AMJAP_0792 IPR035651 BipA, domain V AMJAP_0792 IPR035647 EF-G domain III/V-like AMJAP_0792 IPR000640 Elongation factor EFG, domain V-like AMJAP_0792 IPR004161 Translation elongation factor EFTu-like, domain 2 AMJAP_0792 IPR031157 Tr-type G domain, conserved site AMJAP_0792 IPR006298 GTP-binding protein TypA AMJAP_0792 IPR042116 GTP-binding protein TypA/BipA, C-terminal AMJAP_0792 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_0792 IPR000795 Transcription factor, GTP-binding domain AMJAP_0792 IPR005225 Small GTP-binding protein domain AMJAP_0792 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0793 IPR004809 Glutamine synthetase type I AMJAP_0793 IPR027303 Glutamine synthetase, glycine-rich site AMJAP_0793 IPR008147 Glutamine synthetase, beta-Grasp domain AMJAP_0793 IPR036651 Glutamine synthetase, N-terminal domain superfamily AMJAP_0793 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMJAP_0793 IPR008146 Glutamine synthetase, catalytic domain AMJAP_0793 IPR001637 Glutamine synthetase class-I, adenylation site AMJAP_0793 IPR027302 Glutamine synthetase, N-terminal conserved site AMJAP_0794 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_0794 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_0794 IPR005467 Histidine kinase domain AMJAP_0794 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_0794 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_0794 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_0794 IPR000014 PAS domain AMJAP_0794 IPR035965 PAS domain superfamily AMJAP_0794 IPR013767 PAS fold AMJAP_0795 IPR011006 CheY-like superfamily AMJAP_0795 IPR009057 Homeobox-like domain superfamily AMJAP_0795 IPR003593 AAA+ ATPase domain AMJAP_0795 IPR010114 DNA-binding transcriptional regulator NtrC AMJAP_0795 IPR002197 DNA binding HTH domain, Fis-type AMJAP_0795 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0795 IPR001789 Signal transduction response regulator, receiver domain AMJAP_0795 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_0795 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_0795 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_0795 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_0796 IPR029028 Alpha/beta knot methyltransferases AMJAP_0796 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMJAP_0796 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase AMJAP_0796 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMJAP_0797 IPR003708 Bacterial protein export chaperone SecB AMJAP_0797 IPR035958 SecB-like superfamily AMJAP_0798 IPR014025 Glutaredoxin subgroup AMJAP_0798 IPR011767 Glutaredoxin active site AMJAP_0798 IPR036249 Thioredoxin-like superfamily AMJAP_0798 IPR011900 Glutaredoxin, GrxC AMJAP_0798 IPR002109 Glutaredoxin AMJAP_0799 IPR036873 Rhodanese-like domain superfamily AMJAP_0799 IPR001763 Rhodanese-like domain AMJAP_0800 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily AMJAP_0800 IPR006124 Metalloenzyme AMJAP_0800 IPR017850 Alkaline-phosphatase-like, core domain superfamily AMJAP_0800 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent AMJAP_0800 IPR011258 BPG-independent PGAM, N-terminal AMJAP_0801 IPR011055 Duplicated hybrid motif AMJAP_0801 IPR016047 Peptidase M23 AMJAP_0802 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_0802 IPR001478 PDZ domain AMJAP_0802 IPR036034 PDZ superfamily AMJAP_0802 IPR004447 C-terminal-processing peptidase S41A AMJAP_0802 IPR005151 Tail specific protease AMJAP_0805 IPR009057 Homeobox-like domain superfamily AMJAP_0805 IPR001647 DNA-binding HTH domain, TetR-type AMJAP_0805 IPR023769 Nucleoid occlusion factor SlmA AMJAP_0805 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMJAP_0806 IPR001048 Aspartate/glutamate/uridylate kinase AMJAP_0806 IPR037528 Acetylglutamate kinase ArgB AMJAP_0806 IPR004662 Acetylglutamate kinase family AMJAP_0806 IPR036393 Acetylglutamate kinase-like superfamily AMJAP_0806 IPR001057 Glutamate/acetylglutamate kinase AMJAP_0806 IPR041727 N-Acetyl-L-glutamate kinase, cyclic AMJAP_0807 IPR005843 Alpha-D-phosphohexomutase, C-terminal AMJAP_0807 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AMJAP_0807 IPR016066 Alpha-D-phosphohexomutase, conserved site AMJAP_0807 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AMJAP_0807 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AMJAP_0807 IPR005841 Alpha-D-phosphohexomutase superfamily AMJAP_0807 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AMJAP_0807 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AMJAP_0808 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase AMJAP_0808 IPR036157 dUTPase-like superfamily AMJAP_0808 IPR033704 dUTPase, trimeric AMJAP_0808 IPR029054 dUTPase-like AMJAP_0809 IPR003382 Flavoprotein AMJAP_0809 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC AMJAP_0809 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal AMJAP_0809 IPR036551 Flavin prenyltransferase-like AMJAP_0809 IPR035929 CoaB-like superfamily AMJAP_0810 IPR010994 RuvA domain 2-like AMJAP_0810 IPR001405 Uncharacterised protein family UPF0758 AMJAP_0810 IPR037518 MPN domain AMJAP_0810 IPR025657 RadC-like JAB domain AMJAP_0810 IPR020891 Uncharacterised protein family UPF0758, conserved site AMJAP_0811 IPR001383 Ribosomal protein L28 AMJAP_0811 IPR037147 Ribosomal protein L28/L24 superfamily AMJAP_0811 IPR026569 Ribosomal protein L28/L24 AMJAP_0811 IPR034704 L28p-like AMJAP_0812 IPR018264 Ribosomal protein L33, conserved site AMJAP_0812 IPR011332 Zinc-binding ribosomal protein AMJAP_0812 IPR038584 Ribosomal protein L33 superfamily AMJAP_0812 IPR001705 Ribosomal protein L33 AMJAP_0813 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type AMJAP_0813 IPR010663 Zinc finger, FPG/IleRS-type AMJAP_0813 IPR035937 MutM-like, N-terminal AMJAP_0813 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain AMJAP_0813 IPR020629 Formamidopyrimidine-DNA glycosylase AMJAP_0813 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site AMJAP_0813 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding AMJAP_0813 IPR010979 Ribosomal protein S13-like, H2TH AMJAP_0815 IPR029787 Nucleotide cyclase AMJAP_0815 IPR005330 MHYT domain AMJAP_0815 IPR000160 GGDEF domain AMJAP_0815 IPR001633 EAL domain AMJAP_0815 IPR035919 EAL domain superfamily AMJAP_0816 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily AMJAP_0816 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMJAP_0818 IPR029056 Ribokinase-like AMJAP_0818 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase AMJAP_0818 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase AMJAP_0819 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B AMJAP_0819 IPR025747 ThiC-associated domain AMJAP_0819 IPR037509 Phosphomethylpyrimidine synthase AMJAP_0819 IPR038521 ThiC/Bza superfamily AMJAP_0823 IPR001279 Metallo-beta-lactamase AMJAP_0823 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMJAP_0825 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0825 IPR030870 Cell division protein ZapE AMJAP_0825 IPR005654 ATPase, AFG1-like AMJAP_0826 IPR024898 Octanoyltransferase LipM AMJAP_0826 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AMJAP_0827 IPR022953 ATP-dependent 6-phosphofructokinase AMJAP_0827 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic AMJAP_0827 IPR000023 Phosphofructokinase domain AMJAP_0827 IPR035966 Phosphofructokinase superfamily AMJAP_0827 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type AMJAP_0827 IPR015912 Phosphofructokinase, conserved site AMJAP_0833 IPR036873 Rhodanese-like domain superfamily AMJAP_0833 IPR001763 Rhodanese-like domain AMJAP_0833 IPR017582 tRNA 2-selenouridine/geranyl-2-thiouridine synthase AMJAP_0834 IPR014509 Uncharacterised conserved protein UCP020606 AMJAP_0838 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 AMJAP_0838 IPR006094 FAD linked oxidase, N-terminal AMJAP_0838 IPR004490 Glycolate oxidase subunit GlcD AMJAP_0838 IPR016166 FAD-binding domain, PCMH-type AMJAP_0838 IPR036318 FAD-binding, type PCMH-like superfamily AMJAP_0838 IPR004113 FAD-linked oxidase, C-terminal AMJAP_0838 IPR016164 FAD-linked oxidase-like, C-terminal AMJAP_0839 IPR004681 TRAP transporter large membrane protein DctM AMJAP_0839 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_0841 IPR026289 Solute binding protein, TakP-like AMJAP_0841 IPR041722 Alpha-keto acid binding periplasmic protein AMJAP_0841 IPR006311 Twin-arginine translocation pathway, signal sequence AMJAP_0841 IPR038404 TRAP transporter solute receptor DctP superfamily AMJAP_0841 IPR018389 TRAP transporter solute receptor DctP/TeaA AMJAP_0842 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_0842 IPR011711 GntR, C-terminal AMJAP_0842 IPR008920 Transcription regulator FadR/GntR, C-terminal AMJAP_0842 IPR000524 Transcription regulator HTH, GntR AMJAP_0842 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_0843 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMJAP_0843 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal AMJAP_0843 IPR004660 Pyruvate dehydrogenase E1 component AMJAP_0843 IPR041621 Pyruvate dehydrogenase E1 component, middle domain AMJAP_0843 IPR005474 Transketolase, N-terminal AMJAP_0843 IPR029061 Thiamin diphosphate-binding fold AMJAP_0844 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AMJAP_0844 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMJAP_0844 IPR011053 Single hybrid motif AMJAP_0844 IPR004167 Peripheral subunit-binding domain AMJAP_0844 IPR036625 E3-binding domain superfamily AMJAP_0844 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMJAP_0844 IPR000089 Biotin/lipoyl attachment AMJAP_0844 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex AMJAP_0845 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AMJAP_0845 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AMJAP_0845 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AMJAP_0845 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AMJAP_0845 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_0845 IPR036291 NAD(P)-binding domain superfamily AMJAP_0845 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AMJAP_0845 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AMJAP_0846 IPR036291 NAD(P)-binding domain superfamily AMJAP_0846 IPR001509 NAD-dependent epimerase/dehydratase AMJAP_0847 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMJAP_0847 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AMJAP_0847 IPR022712 Beta-Casp domain AMJAP_0847 IPR001279 Metallo-beta-lactamase AMJAP_0851 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ AMJAP_0851 IPR003362 Bacterial sugar transferase AMJAP_0851 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMJAP_0852 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase AMJAP_0852 IPR004629 Glycosyl transferase WecB/TagA/CpsF AMJAP_0853 IPR001296 Glycosyl transferase, family 1 AMJAP_0854 IPR001296 Glycosyl transferase, family 1 AMJAP_0854 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMJAP_0861 IPR005835 Nucleotidyl transferase domain AMJAP_0861 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal AMJAP_0861 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase AMJAP_0861 IPR014710 RmlC-like jelly roll fold AMJAP_0861 IPR011051 RmlC-like cupin domain superfamily AMJAP_0861 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0862 IPR005225 Small GTP-binding protein domain AMJAP_0862 IPR002891 Adenylyl-sulfate kinase AMJAP_0862 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain AMJAP_0862 IPR031157 Tr-type G domain, conserved site AMJAP_0862 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0862 IPR011779 Sulphate adenylyltransferase, large subunit AMJAP_0862 IPR000795 Transcription factor, GTP-binding domain AMJAP_0862 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_0862 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMJAP_0863 IPR002500 Phosphoadenosine phosphosulphate reductase AMJAP_0863 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0863 IPR011784 Sulphate adenylyltransferase, small subunit AMJAP_0864 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AMJAP_0864 IPR006037 Regulator of K+ conductance, C-terminal AMJAP_0864 IPR031312 Sodium/sulphate symporter, conserved site AMJAP_0864 IPR004680 Citrate transporter-like domain AMJAP_0865 IPR020550 Inositol monophosphatase, conserved site AMJAP_0865 IPR000760 Inositol monophosphatase-like AMJAP_0865 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ AMJAP_0865 IPR020583 Inositol monophosphatase, metal-binding site AMJAP_0866 IPR005886 UDP-glucose 4-epimerase AMJAP_0866 IPR036291 NAD(P)-binding domain superfamily AMJAP_0866 IPR016040 NAD(P)-binding domain AMJAP_0869 IPR005843 Alpha-D-phosphohexomutase, C-terminal AMJAP_0869 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AMJAP_0869 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AMJAP_0869 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AMJAP_0869 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AMJAP_0869 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AMJAP_0869 IPR005841 Alpha-D-phosphohexomutase superfamily AMJAP_0869 IPR016066 Alpha-D-phosphohexomutase, conserved site AMJAP_0871 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily AMJAP_0871 IPR017476 UDP-glucose/GDP-mannose dehydrogenase AMJAP_0871 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation AMJAP_0871 IPR036291 NAD(P)-binding domain superfamily AMJAP_0871 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_0871 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal AMJAP_0871 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type AMJAP_0871 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal AMJAP_0872 IPR035476 Phosphoglucose isomerase, SIS domain 1 AMJAP_0872 IPR001672 Phosphoglucose isomerase (PGI) AMJAP_0872 IPR023096 Phosphoglucose isomerase, C-terminal AMJAP_0872 IPR018189 Phosphoglucose isomerase, conserved site AMJAP_0872 IPR035482 Phosphoglucose isomerase, SIS domain 2 AMJAP_0873 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0873 IPR005835 Nucleotidyl transferase domain AMJAP_0873 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type AMJAP_0875 IPR016195 Polymerase/histidinol phosphatase-like AMJAP_0875 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC AMJAP_0876 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0876 IPR025669 AAA domain AMJAP_0876 IPR005702 Exopolysaccharide synthesis protein AMJAP_0879 IPR001453 MoaB/Mog domain AMJAP_0879 IPR036425 MoaB/Mog-like domain superfamily AMJAP_0879 IPR012245 Molybdenum cofactor biosynthesis protein MoaB AMJAP_0879 IPR008284 Molybdenum cofactor biosynthesis, conserved site AMJAP_0879 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria AMJAP_0880 IPR038987 Molybdopterin biosynthesis protein MoeA-like AMJAP_0880 IPR005110 MoeA, N-terminal and linker domain AMJAP_0880 IPR036688 MoeA, C-terminal, domain IV superfamily AMJAP_0880 IPR008284 Molybdenum cofactor biosynthesis, conserved site AMJAP_0880 IPR005111 MoeA, C-terminal, domain IV AMJAP_0880 IPR036135 MoeA, N-terminal and linker domain superfamily AMJAP_0880 IPR036425 MoaB/Mog-like domain superfamily AMJAP_0880 IPR001453 MoaB/Mog domain AMJAP_0881 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AMJAP_0881 IPR003749 Sulfur carrier ThiS/MoaD-like AMJAP_0881 IPR012675 Beta-grasp domain superfamily AMJAP_0882 IPR013482 Molybdenum cofactor guanylyltransferase AMJAP_0882 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_0882 IPR025877 MobA-like NTP transferase AMJAP_0883 IPR022957 Uncharacterised protein family UPF0299 AMJAP_0883 IPR005538 LrgA/CidA family AMJAP_0884 IPR007300 CidB/LrgB family AMJAP_0885 IPR030870 Cell division protein ZapE AMJAP_0885 IPR005654 ATPase, AFG1-like AMJAP_0885 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0886 IPR036899 Ribosomal protein L13 superfamily AMJAP_0886 IPR005822 Ribosomal protein L13 AMJAP_0886 IPR023563 Ribosomal protein L13, conserved site AMJAP_0886 IPR005823 Ribosomal protein L13, bacterial-type AMJAP_0887 IPR020574 Ribosomal protein S9, conserved site AMJAP_0887 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_0887 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_0887 IPR000754 Ribosomal protein S9 AMJAP_0887 IPR023035 Ribosomal protein S9, bacterial/plastid AMJAP_0888 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMJAP_0888 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMJAP_0888 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit AMJAP_0888 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal AMJAP_0888 IPR005805 Rieske iron-sulphur protein, C-terminal AMJAP_0888 IPR014349 Rieske iron-sulphur protein AMJAP_0889 IPR005798 Cytochrome b/b6, C-terminal AMJAP_0889 IPR016174 Di-haem cytochrome, transmembrane AMJAP_0889 IPR030689 Cytochrome b AMJAP_0889 IPR027387 Cytochrome b/b6-like domain superfamily AMJAP_0889 IPR005797 Cytochrome b/b6, N-terminal AMJAP_0889 IPR036150 Cytochrome b/b6, C-terminal domain superfamily AMJAP_0890 IPR009056 Cytochrome c-like domain AMJAP_0890 IPR002326 Cytochrome c1 AMJAP_0890 IPR036909 Cytochrome c-like domain superfamily AMJAP_0891 IPR004046 Glutathione S-transferase, C-terminal AMJAP_0891 IPR004045 Glutathione S-transferase, N-terminal AMJAP_0891 IPR040079 Glutathione Transferase family AMJAP_0891 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMJAP_0891 IPR010987 Glutathione S-transferase, C-terminal-like AMJAP_0891 IPR034341 Stringent starvation protein A, N-terminal AMJAP_0891 IPR036249 Thioredoxin-like superfamily AMJAP_0892 IPR036760 SspB-like superfamily AMJAP_0892 IPR007481 Stringent starvation protein B AMJAP_0893 IPR007055 BON domain AMJAP_0893 IPR014004 Transport-associated and nodulation domain, bacteria AMJAP_0894 IPR004515 Phosphoheptose isomerase AMJAP_0894 IPR035461 GmhA/DiaA AMJAP_0894 IPR001347 Sugar isomerase (SIS) AMJAP_0895 IPR011335 Restriction endonuclease type II-like AMJAP_0895 IPR011856 tRNA endonuclease-like domain superfamily AMJAP_0895 IPR003509 Uncharacterised protein family UPF0102 AMJAP_0896 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_0896 IPR028082 Periplasmic binding protein-like I AMJAP_0896 IPR007443 Penicillin-binding protein activator LpoA AMJAP_0897 IPR000878 Tetrapyrrole methylase AMJAP_0897 IPR035996 Tetrapyrrole methylase superfamily AMJAP_0897 IPR014777 Tetrapyrrole methylase, subdomain 1 AMJAP_0897 IPR008189 rRNA small subunit methyltransferase I AMJAP_0897 IPR018063 SAM-dependent methyltransferase RsmI, conserved site AMJAP_0897 IPR014776 Tetrapyrrole methylase, subdomain 2 AMJAP_0902 IPR038152 Carbamoyltransferase, C-terminal domain superfamily AMJAP_0902 IPR003696 Carbamoyltransferase AMJAP_0902 IPR031730 Carbamoyltransferase, C-terminal AMJAP_0903 IPR038619 MraZ superfamily AMJAP_0903 IPR020603 MraZ domain AMJAP_0903 IPR007159 SpoVT-AbrB domain AMJAP_0903 IPR037914 SpoVT-AbrB domain superfamily AMJAP_0903 IPR003444 Transcriptional regulator MraZ AMJAP_0903 IPR035642 MraZ, N-terminal AMJAP_0903 IPR035644 MraZ, C-terminal AMJAP_0904 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily AMJAP_0904 IPR002903 Ribosomal RNA small subunit methyltransferase H AMJAP_0904 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_0906 IPR037532 Peptidoglycan D,D-transpeptidase FtsI AMJAP_0906 IPR005311 Penicillin-binding protein, dimerisation domain AMJAP_0906 IPR036138 Penicillin-binding protein, dimerisation domain superfamily AMJAP_0906 IPR001460 Penicillin-binding protein, transpeptidase AMJAP_0906 IPR012338 Beta-lactamase/transpeptidase-like AMJAP_0907 IPR004101 Mur ligase, C-terminal AMJAP_0907 IPR035911 MurE/MurF, N-terminal AMJAP_0907 IPR036565 Mur-like, catalytic domain superfamily AMJAP_0907 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase AMJAP_0907 IPR036615 Mur ligase, C-terminal domain superfamily AMJAP_0907 IPR000713 Mur ligase, N-terminal catalytic domain AMJAP_0907 IPR013221 Mur ligase, central AMJAP_0908 IPR036565 Mur-like, catalytic domain superfamily AMJAP_0908 IPR004101 Mur ligase, C-terminal AMJAP_0908 IPR036615 Mur ligase, C-terminal domain superfamily AMJAP_0908 IPR013221 Mur ligase, central AMJAP_0908 IPR000713 Mur ligase, N-terminal catalytic domain AMJAP_0908 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase AMJAP_0908 IPR035911 MurE/MurF, N-terminal AMJAP_0909 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site AMJAP_0909 IPR000715 Glycosyl transferase, family 4 AMJAP_0909 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase AMJAP_0910 IPR036615 Mur ligase, C-terminal domain superfamily AMJAP_0910 IPR013221 Mur ligase, central AMJAP_0910 IPR036565 Mur-like, catalytic domain superfamily AMJAP_0910 IPR004101 Mur ligase, C-terminal AMJAP_0910 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase AMJAP_0911 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site AMJAP_0911 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA AMJAP_0911 IPR013437 Probable peptidoglycan glycosyltransferase FtsW AMJAP_0912 IPR007235 Glycosyl transferase, family 28, C-terminal AMJAP_0912 IPR004276 Glycosyltransferase family 28, N-terminal domain AMJAP_0912 IPR006311 Twin-arginine translocation pathway, signal sequence AMJAP_0912 IPR006009 N-acetylglucosaminyltransferase, MurG AMJAP_0913 IPR005758 UDP-N-acetylmuramate--L-alanine ligase AMJAP_0913 IPR000713 Mur ligase, N-terminal catalytic domain AMJAP_0913 IPR004101 Mur ligase, C-terminal AMJAP_0913 IPR013221 Mur ligase, central AMJAP_0913 IPR036615 Mur ligase, C-terminal domain superfamily AMJAP_0913 IPR036565 Mur-like, catalytic domain superfamily AMJAP_0914 IPR016185 Pre-ATP-grasp domain superfamily AMJAP_0914 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site AMJAP_0914 IPR011095 D-alanine--D-alanine ligase, C-terminal AMJAP_0914 IPR005905 D-alanine--D-alanine ligase AMJAP_0914 IPR011761 ATP-grasp fold AMJAP_0914 IPR013815 ATP-grasp fold, subdomain 1 AMJAP_0914 IPR011127 D-alanine--D-alanine ligase, N-terminal domain AMJAP_0915 IPR005548 Cell division protein FtsQ/DivIB AMJAP_0915 IPR026579 Cell division protein FtsQ AMJAP_0915 IPR034746 POTRA domain AMJAP_0915 IPR013685 POTRA domain, FtsQ-type AMJAP_0916 IPR020823 Cell division protein FtsA AMJAP_0916 IPR003494 SHS2 domain inserted in FtsA AMJAP_0917 IPR020805 Cell division protein FtsZ, conserved site AMJAP_0917 IPR024757 Cell division protein FtsZ, C-terminal AMJAP_0917 IPR008280 Tubulin/FtsZ, C-terminal AMJAP_0917 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMJAP_0917 IPR003008 Tubulin/FtsZ, GTPase domain AMJAP_0917 IPR000158 Cell division protein FtsZ AMJAP_0917 IPR036525 Tubulin/FtsZ, GTPase domain superfamily AMJAP_0918 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal AMJAP_0918 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase AMJAP_0918 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_0918 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal AMJAP_0919 IPR000185 Protein translocase subunit SecA AMJAP_0919 IPR036670 SecA, preprotein cross-linking domain superfamily AMJAP_0919 IPR020937 SecA conserved site AMJAP_0919 IPR011130 SecA, preprotein cross-linking domain AMJAP_0919 IPR011116 SecA Wing/Scaffold AMJAP_0919 IPR036266 SecA, Wing/Scaffold superfamily AMJAP_0919 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0919 IPR004027 SEC-C motif AMJAP_0919 IPR014018 SecA motor DEAD AMJAP_0919 IPR011115 SecA DEAD-like, N-terminal AMJAP_0920 IPR002813 Arginine biosynthesis protein ArgJ AMJAP_0920 IPR016117 ArgJ-like domain superfamily AMJAP_0920 IPR042195 ArgJ beta chain, C-terminal domain AMJAP_0921 IPR013785 Aldolase-type TIM barrel AMJAP_0921 IPR034291 Thiamine phosphate synthase AMJAP_0921 IPR022998 Thiamine phosphate synthase/TenI AMJAP_0921 IPR036206 Thiamin phosphate synthase superfamily AMJAP_0922 IPR013088 Zinc finger, NHR/GATA-type AMJAP_0922 IPR005584 DNA gyrase inhibitor YacG AMJAP_0923 IPR001977 Dephospho-CoA kinase AMJAP_0923 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0924 IPR000045 Prepilin type IV endopeptidase, peptidase domain AMJAP_0924 IPR014032 Peptidase A24A, prepilin type IV, bacterial AMJAP_0924 IPR010627 Peptidase A24A, N-terminal AMJAP_0925 IPR042094 Type II secretion system F domain superfamily AMJAP_0925 IPR001992 Type II secretion system conserved site AMJAP_0925 IPR018076 Type II secretion system F domain AMJAP_0925 IPR003004 GspF/PilC family AMJAP_0926 IPR042181 Type II secretion system, protein E, N-terminal AMJAP_0926 IPR013374 ATPase, type IV, pilus assembly, PilB AMJAP_0926 IPR037257 General secretory system II, protein E, N-terminal superfamily AMJAP_0926 IPR001482 Type II/IV secretion system protein AMJAP_0926 IPR007831 General secretory system II, protein E, N-terminal AMJAP_0926 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0927 IPR012902 Prokaryotic N-terminal methylation site AMJAP_0927 IPR001082 Fimbrial protein pilin AMJAP_0929 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal AMJAP_0929 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily AMJAP_0929 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal AMJAP_0929 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal AMJAP_0929 IPR004393 Nicotinate-nucleotide pyrophosphorylase AMJAP_0929 IPR013785 Aldolase-type TIM barrel AMJAP_0929 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD AMJAP_0930 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily AMJAP_0930 IPR002502 N-acetylmuramoyl-L-alanine amidase domain AMJAP_0931 IPR031347 Protein AmpE AMJAP_0932 IPR003593 AAA+ ATPase domain AMJAP_0932 IPR013611 Transport-associated OB, type 2 AMJAP_0932 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AMJAP_0932 IPR008995 Molybdate/tungstate binding, C-terminal AMJAP_0932 IPR017871 ABC transporter, conserved site AMJAP_0932 IPR003439 ABC transporter-like AMJAP_0932 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA AMJAP_0932 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0933 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_0933 IPR035906 MetI-like superfamily AMJAP_0933 IPR005667 Sulphate ABC transporter permease protein 2 AMJAP_0933 IPR011865 Sulphate ABC transporter, permease protein CysT AMJAP_0934 IPR026045 Ferric binding protein AMJAP_0934 IPR006059 Bacterial extracellular solute-binding protein AMJAP_0936 IPR002528 Multi antimicrobial extrusion protein AMJAP_0937 IPR011283 Acetoacetyl-CoA reductase AMJAP_0937 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_0937 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_0937 IPR036291 NAD(P)-binding domain superfamily AMJAP_0939 IPR004027 SEC-C motif AMJAP_0939 IPR023006 Uncharacterised protein family UPF0225 AMJAP_0939 IPR032710 NTF2-like domain superfamily AMJAP_0940 IPR034748 Exonuclease I, C-terminal alpha-helical domain AMJAP_0940 IPR023607 Exodeoxyribonuclease I AMJAP_0940 IPR034747 Exonuclease I, SH3-like domain AMJAP_0940 IPR036397 Ribonuclease H superfamily AMJAP_0940 IPR013520 Exonuclease, RNase T/DNA polymerase III AMJAP_0940 IPR013620 Exodeoxyribonuclease I, C-terminal AMJAP_0940 IPR038649 Exonuclease I, SH3-like domain superfamily AMJAP_0940 IPR012337 Ribonuclease H-like superfamily AMJAP_0942 IPR011765 Peptidase M16, N-terminal AMJAP_0942 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AMJAP_0942 IPR001431 Peptidase M16, zinc-binding site AMJAP_0942 IPR011844 Coenzyme PQQ biosynthesis protein PqqF AMJAP_0942 IPR007863 Peptidase M16, C-terminal AMJAP_0944 IPR006036 Potassium uptake protein TrkA AMJAP_0944 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AMJAP_0944 IPR036291 NAD(P)-binding domain superfamily AMJAP_0944 IPR006037 Regulator of K+ conductance, C-terminal AMJAP_0944 IPR003148 Regulator of K+ conductance, N-terminal AMJAP_0945 IPR000620 EamA domain AMJAP_0947 IPR005583 Peroxide stress protein YaaA AMJAP_0948 IPR036913 YegP-like superfamily AMJAP_0948 IPR002306 Tryptophan-tRNA ligase AMJAP_0948 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0948 IPR002305 Aminoacyl-tRNA synthetase, class Ic AMJAP_0948 IPR024109 Tryptophan-tRNA ligase, bacterial-type AMJAP_0949 IPR036873 Rhodanese-like domain superfamily AMJAP_0949 IPR001763 Rhodanese-like domain AMJAP_0950 IPR007351 Uncharacterised protein YjbR AMJAP_0950 IPR038056 YjbR-like superfamily AMJAP_0951 IPR011008 Dimeric alpha-beta barrel AMJAP_0951 IPR006314 Dyp-type peroxidase AMJAP_0953 IPR005856 Cysteine synthase AMJAP_0953 IPR005859 Cysteine synthase CysK AMJAP_0953 IPR001926 Pyridoxal-phosphate dependent enzyme AMJAP_0953 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AMJAP_0953 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMJAP_0957 IPR006218 DAHP synthetase I/KDSA AMJAP_0957 IPR013785 Aldolase-type TIM barrel AMJAP_0957 IPR006269 3-deoxy-8-phosphooctulonate synthase AMJAP_0959 IPR014419 Heme utilization protein HutZ AMJAP_0959 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AMJAP_0959 IPR012349 FMN-binding split barrel AMJAP_0966 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal AMJAP_0966 IPR013509 Ribonucleotide reductase large subunit, N-terminal AMJAP_0966 IPR000788 Ribonucleotide reductase large subunit, C-terminal AMJAP_0966 IPR013346 Ribonucleotide reductase, class I , alpha subunit AMJAP_0966 IPR039718 Ribonucleoside-diphosphate reductase large subunit AMJAP_0966 IPR005144 ATP-cone domain AMJAP_0967 IPR012348 Ribonucleotide reductase-like AMJAP_0967 IPR030475 Ribonucleotide reductase small subunit, acitve site AMJAP_0967 IPR033909 Ribonucleotide reductase small subunit AMJAP_0967 IPR009078 Ferritin-like superfamily AMJAP_0967 IPR000358 Ribonucleotide reductase small subunit family AMJAP_0968 IPR012675 Beta-grasp domain superfamily AMJAP_0968 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMJAP_0968 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMJAP_0968 IPR036010 2Fe-2S ferredoxin-like superfamily AMJAP_0970 IPR036361 SAP domain superfamily AMJAP_0970 IPR018668 DNA-binding protein VF530-like AMJAP_0972 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif AMJAP_0972 IPR005759 Endonuclease III AMJAP_0972 IPR004036 Endonuclease III-like, conserved site-2 AMJAP_0972 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMJAP_0972 IPR004035 Endonuclease III, iron-sulphur binding site AMJAP_0972 IPR011257 DNA glycosylase AMJAP_0972 IPR000445 Helix-hairpin-helix motif AMJAP_0972 IPR003265 HhH-GPD domain AMJAP_0975 IPR010968 Ion-translocating oxidoreductase complex subunit E AMJAP_0975 IPR003667 NqrDE/RnfAE AMJAP_0976 IPR007329 FMN-binding AMJAP_0976 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG AMJAP_0977 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD AMJAP_0977 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D AMJAP_0978 IPR019554 Soluble ligand binding domain AMJAP_0978 IPR026902 RnfC Barrel sandwich hybrid domain AMJAP_0978 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily AMJAP_0978 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain AMJAP_0978 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC AMJAP_0978 IPR009051 Alpha-helical ferredoxin AMJAP_0978 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_0978 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_0979 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria AMJAP_0979 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB AMJAP_0979 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_0979 IPR007202 4Fe-4S domain AMJAP_0979 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_0980 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA AMJAP_0980 IPR003667 NqrDE/RnfAE AMJAP_0981 IPR002891 Adenylyl-sulfate kinase AMJAP_0981 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMJAP_0981 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_0981 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_0981 IPR000795 Transcription factor, GTP-binding domain AMJAP_0981 IPR011779 Sulphate adenylyltransferase, large subunit AMJAP_0981 IPR031157 Tr-type G domain, conserved site AMJAP_0981 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain AMJAP_0981 IPR005225 Small GTP-binding protein domain AMJAP_0982 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0982 IPR002500 Phosphoadenosine phosphosulphate reductase AMJAP_0982 IPR011784 Sulphate adenylyltransferase, small subunit AMJAP_0983 IPR002781 Transmembrane protein TauE-like AMJAP_0984 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AMJAP_0984 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit AMJAP_0984 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AMJAP_0984 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AMJAP_0984 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AMJAP_0986 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase AMJAP_0986 IPR011798 Adenosine 5'-phosphosulphate reductase AMJAP_0986 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_0986 IPR002500 Phosphoadenosine phosphosulphate reductase AMJAP_0987 IPR012409 Sirohaem synthase AMJAP_0987 IPR028281 Siroheme synthase, central domain AMJAP_0987 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site AMJAP_0987 IPR035996 Tetrapyrrole methylase superfamily AMJAP_0987 IPR019478 Sirohaem synthase, dimerisation domain AMJAP_0987 IPR037115 Sirohaem synthase, dimerisation domain superfamily AMJAP_0987 IPR036291 NAD(P)-binding domain superfamily AMJAP_0987 IPR000878 Tetrapyrrole methylase AMJAP_0987 IPR006366 Uroporphyrin-III C-methyltransferase AMJAP_0987 IPR014776 Tetrapyrrole methylase, subdomain 2 AMJAP_0987 IPR014777 Tetrapyrrole methylase, subdomain 1 AMJAP_0987 IPR006367 Sirohaem synthase, N-terminal AMJAP_0990 IPR023489 Haloalkane dehalogenase, subfamily 1 AMJAP_0990 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_0990 IPR029058 Alpha/Beta hydrolase fold AMJAP_0990 IPR000639 Epoxide hydrolase-like AMJAP_0991 IPR035901 GIY-YIG endonuclease superfamily AMJAP_0991 IPR000305 GIY-YIG endonuclease AMJAP_0992 IPR002195 Dihydroorotase, conserved site AMJAP_0992 IPR032466 Metal-dependent hydrolase AMJAP_0992 IPR006680 Amidohydrolase-related AMJAP_0992 IPR004721 Dihydroorotase homodimeric type AMJAP_0993 IPR006033 Type I L-asparaginase family AMJAP_0993 IPR036152 Asparaginase/glutaminase-like superfamily AMJAP_0993 IPR006034 Asparaginase/glutaminase-like AMJAP_0993 IPR020827 Asparaginase/glutaminase, active site 1 AMJAP_0993 IPR040919 Asparaginase/glutaminase, C-terminal AMJAP_0993 IPR027473 L-asparaginase, C-terminal AMJAP_0993 IPR041725 Type I (cytosolic) L-asparaginase AMJAP_0993 IPR027474 L-asparaginase, N-terminal AMJAP_0993 IPR037152 L-asparaginase, N-terminal domain superfamily AMJAP_0993 IPR027475 Asparaginase/glutaminase, active site 2 AMJAP_0996 IPR009212 Methylthioribose kinase AMJAP_0996 IPR011009 Protein kinase-like domain superfamily AMJAP_0996 IPR002575 Aminoglycoside phosphotransferase AMJAP_0997 IPR006977 Yip1 domain AMJAP_0998 IPR004380 Aspartate racemase AMJAP_0998 IPR033134 Asp/Glu racemase, active site 2 AMJAP_0998 IPR018187 Asp/Glu racemase, active site 1 AMJAP_0998 IPR001920 Asp/Glu racemase AMJAP_0998 IPR015942 Asp/Glu/hydantoin racemase AMJAP_0999 IPR029787 Nucleotide cyclase AMJAP_0999 IPR033416 Periplasmic sensor domain CHASE7 AMJAP_0999 IPR000160 GGDEF domain AMJAP_1000 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal AMJAP_1000 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A AMJAP_1000 IPR012338 Beta-lactamase/transpeptidase-like AMJAP_1002 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_1002 IPR004839 Aminotransferase, class I/classII AMJAP_1002 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_1002 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_1003 IPR003010 Carbon-nitrogen hydrolase AMJAP_1003 IPR036526 Carbon-nitrogen hydrolase superfamily AMJAP_1003 IPR001110 Uncharacterised protein family UPF0012, conserved site AMJAP_1007 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal AMJAP_1007 IPR007502 Helicase-associated domain AMJAP_1007 IPR011545 DEAD/DEAH box helicase domain AMJAP_1007 IPR001650 Helicase, C-terminal AMJAP_1007 IPR010225 ATP-dependent helicase HrpB AMJAP_1007 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1007 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_1008 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMJAP_1008 IPR023214 HAD superfamily AMJAP_1008 IPR006328 L-2-Haloacid dehalogenase AMJAP_1008 IPR041492 Haloacid dehalogenase-like hydrolase AMJAP_1008 IPR006439 HAD hydrolase, subfamily IA AMJAP_1008 IPR036412 HAD-like superfamily AMJAP_1009 IPR014710 RmlC-like jelly roll fold AMJAP_1009 IPR003829 Pirin, N-terminal domain AMJAP_1009 IPR012093 Pirin AMJAP_1009 IPR011051 RmlC-like cupin domain superfamily AMJAP_1009 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain AMJAP_1011 IPR024188 Glutamate synthase large subunit-like protein AMJAP_1011 IPR002932 Glutamate synthase domain AMJAP_1011 IPR013785 Aldolase-type TIM barrel AMJAP_1012 IPR011051 RmlC-like cupin domain superfamily AMJAP_1012 IPR014710 RmlC-like jelly roll fold AMJAP_1012 IPR003829 Pirin, N-terminal domain AMJAP_1012 IPR008778 Pirin, C-terminal domain AMJAP_1012 IPR012093 Pirin AMJAP_1013 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1013 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1013 IPR005119 LysR, substrate-binding AMJAP_1013 IPR000847 Transcription regulator HTH, LysR AMJAP_1014 IPR040079 Glutathione Transferase family AMJAP_1014 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMJAP_1014 IPR004045 Glutathione S-transferase, N-terminal AMJAP_1014 IPR016639 Glutathione S-transferase Omega/GSH AMJAP_1014 IPR036249 Thioredoxin-like superfamily AMJAP_1014 IPR010987 Glutathione S-transferase, C-terminal-like AMJAP_1018 IPR005119 LysR, substrate-binding AMJAP_1018 IPR000847 Transcription regulator HTH, LysR AMJAP_1018 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1018 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1019 IPR036291 NAD(P)-binding domain superfamily AMJAP_1019 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_1019 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_1023 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_1023 IPR036986 RNA-binding S4 domain superfamily AMJAP_1023 IPR002942 RNA-binding S4 domain AMJAP_1023 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AMJAP_1023 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AMJAP_1023 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_1023 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AMJAP_1026 IPR001086 Prephenate dehydratase AMJAP_1026 IPR018528 Prephenate dehydratase, conserved site AMJAP_1026 IPR002701 Chorismate mutase II, prokaryotic-type AMJAP_1026 IPR036979 Chorismate mutase domain superfamily AMJAP_1026 IPR036263 Chorismate mutase type II superfamily AMJAP_1026 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase AMJAP_1026 IPR002912 ACT domain AMJAP_1026 IPR010952 Chorismate mutase, gammaproteobacteria AMJAP_1027 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal AMJAP_1027 IPR029028 Alpha/beta knot methyltransferases AMJAP_1027 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMJAP_1027 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase AMJAP_1027 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMJAP_1028 IPR005467 Histidine kinase domain AMJAP_1028 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AMJAP_1028 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_1028 IPR029151 Periplasmic sensor-like domain superfamily AMJAP_1028 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_1028 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_1028 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_1028 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_1028 IPR033479 Double Cache domain 1 AMJAP_1029 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1029 IPR002197 DNA binding HTH domain, Fis-type AMJAP_1029 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_1029 IPR009057 Homeobox-like domain superfamily AMJAP_1029 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_1029 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_1029 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1029 IPR003593 AAA+ ATPase domain AMJAP_1029 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_1029 IPR011006 CheY-like superfamily AMJAP_1035 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMJAP_1035 IPR001296 Glycosyl transferase, family 1 AMJAP_1036 IPR019888 Transcription regulator AsnC-type AMJAP_1036 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMJAP_1036 IPR011991 ArsR-like helix-turn-helix domain AMJAP_1036 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1036 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1036 IPR011008 Dimeric alpha-beta barrel AMJAP_1036 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMJAP_1036 IPR000485 AsnC-type HTH domain AMJAP_1037 IPR000891 Pyruvate carboxyltransferase AMJAP_1037 IPR039371 LeuA, N-terminal catalytic TIM barrel domain AMJAP_1037 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site AMJAP_1037 IPR013785 Aldolase-type TIM barrel AMJAP_1037 IPR005668 2-isopropylmalate synthase AMJAP_1037 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily AMJAP_1037 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain AMJAP_1038 IPR036526 Carbon-nitrogen hydrolase superfamily AMJAP_1038 IPR000132 Nitrilase/cyanide hydratase, conserved site AMJAP_1038 IPR003010 Carbon-nitrogen hydrolase AMJAP_1040 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1040 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1040 IPR002577 Helix-turn-helix, HxlR type AMJAP_1040 IPR011991 ArsR-like helix-turn-helix domain AMJAP_1041 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1041 IPR001650 Helicase, C-terminal AMJAP_1041 IPR011545 DEAD/DEAH box helicase domain AMJAP_1041 IPR028621 ATP-dependent RNA helicase SrmB AMJAP_1041 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_1041 IPR014014 RNA helicase, DEAD-box type, Q motif AMJAP_1041 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMJAP_1042 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_1042 IPR040766 RapA, N-terminal Tudor-like domain 2 AMJAP_1042 IPR023949 RNA polymerase-associated protein RapA AMJAP_1042 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1042 IPR022737 RNA polymerase recycling, bacterial, C-terminal AMJAP_1042 IPR038718 SNF2-like, N-terminal domain superfamily AMJAP_1042 IPR040765 RapA, N-terminal Tudor like domain 1 AMJAP_1042 IPR000330 SNF2-related, N-terminal domain AMJAP_1042 IPR001650 Helicase, C-terminal AMJAP_1043 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMJAP_1043 IPR001650 Helicase, C-terminal AMJAP_1043 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_1043 IPR028621 ATP-dependent RNA helicase SrmB AMJAP_1043 IPR014014 RNA helicase, DEAD-box type, Q motif AMJAP_1043 IPR011545 DEAD/DEAH box helicase domain AMJAP_1043 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1044 IPR009056 Cytochrome c-like domain AMJAP_1044 IPR036909 Cytochrome c-like domain superfamily AMJAP_1045 IPR035919 EAL domain superfamily AMJAP_1045 IPR000160 GGDEF domain AMJAP_1045 IPR001633 EAL domain AMJAP_1045 IPR029787 Nucleotide cyclase AMJAP_1045 IPR005330 MHYT domain AMJAP_1047 IPR011399 Nitrous oxide reductase expression regulator NosR AMJAP_1047 IPR007329 FMN-binding AMJAP_1047 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_1048 IPR002429 Cytochrome c oxidase subunit II-like C-terminal AMJAP_1048 IPR006311 Twin-arginine translocation pathway, signal sequence AMJAP_1048 IPR041142 Nitrous oxide reductase, propeller repeat 2 AMJAP_1048 IPR034205 Nitrous-oxide reductase, C-terminal AMJAP_1048 IPR011045 Nitrous oxide reductase, N-terminal AMJAP_1048 IPR008972 Cupredoxin AMJAP_1048 IPR001505 Copper centre Cu(A) AMJAP_1048 IPR041114 Nitrous oxide reductase, propeller repeat 1 AMJAP_1048 IPR023644 Nitrous-oxide reductase AMJAP_1048 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AMJAP_1049 IPR006626 Parallel beta-helix repeat AMJAP_1049 IPR022441 Parallel beta-helix repeat-2 AMJAP_1049 IPR011050 Pectin lyase fold/virulence factor AMJAP_1049 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain AMJAP_1049 IPR026464 Nitrous oxide reductase family maturation protein NosD AMJAP_1049 IPR006633 Carbohydrate-binding/sugar hydrolysis domain AMJAP_1049 IPR012334 Pectin lyase fold AMJAP_1050 IPR017871 ABC transporter, conserved site AMJAP_1050 IPR003593 AAA+ ATPase domain AMJAP_1050 IPR003439 ABC transporter-like AMJAP_1050 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1051 IPR032688 ABC-2 family transporter protein AMJAP_1052 IPR008719 Nitrous oxide reductase accessory protein NosL AMJAP_1055 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1055 IPR003439 ABC transporter-like AMJAP_1055 IPR032781 ABC-transporter extension domain AMJAP_1055 IPR003593 AAA+ ATPase domain AMJAP_1057 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMJAP_1059 IPR000700 PAS-associated, C-terminal AMJAP_1059 IPR013656 PAS fold-4 AMJAP_1059 IPR035965 PAS domain superfamily AMJAP_1059 IPR029787 Nucleotide cyclase AMJAP_1059 IPR000014 PAS domain AMJAP_1059 IPR000160 GGDEF domain AMJAP_1061 IPR005821 Ion transport domain AMJAP_1061 IPR018488 Cyclic nucleotide-binding, conserved site AMJAP_1061 IPR000595 Cyclic nucleotide-binding domain AMJAP_1061 IPR018490 Cyclic nucleotide-binding-like AMJAP_1061 IPR014710 RmlC-like jelly roll fold AMJAP_1061 IPR028325 Voltage-gated potassium channel AMJAP_1063 IPR034122 Retropepsin-like domain, bacterial AMJAP_1063 IPR021109 Aspartic peptidase domain superfamily AMJAP_1063 IPR001969 Aspartic peptidase, active site AMJAP_1063 IPR011969 Clan AA aspartic peptidase, C-terminal AMJAP_1066 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase AMJAP_1066 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1068 IPR029787 Nucleotide cyclase AMJAP_1068 IPR039435 Diguanylate cyclase DosC, globin sensor domain AMJAP_1068 IPR009050 Globin-like superfamily AMJAP_1068 IPR000160 GGDEF domain AMJAP_1068 IPR012292 Globin/Protoglobin AMJAP_1070 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily AMJAP_1070 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1070 IPR003593 AAA+ ATPase domain AMJAP_1070 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AMJAP_1070 IPR021029 DNA polymerase III, tau subunit, domain V AMJAP_1070 IPR012763 DNA polymerase III, subunit gamma/ tau AMJAP_1070 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV AMJAP_1070 IPR022754 DNA polymerase III, gamma subunit, domain III AMJAP_1070 IPR001270 ClpA/B family AMJAP_1071 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AMJAP_1071 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMJAP_1072 IPR015967 Recombination protein RecR, conserved site AMJAP_1072 IPR023628 Recombination protein RecR, C4-type zinc finger AMJAP_1072 IPR034137 RecR, TOPRIM domain AMJAP_1072 IPR000093 DNA recombination protein RecR AMJAP_1072 IPR023627 Recombination protein RecR AMJAP_1072 IPR006171 TOPRIM domain AMJAP_1073 IPR010997 HRDC-like superfamily AMJAP_1073 IPR002121 HRDC domain AMJAP_1073 IPR006292 Ribonuclease D AMJAP_1073 IPR012337 Ribonuclease H-like superfamily AMJAP_1073 IPR036397 Ribonuclease H superfamily AMJAP_1073 IPR002562 3'-5' exonuclease domain AMJAP_1074 IPR027354 YcgL domain AMJAP_1074 IPR038068 YcgL-like superfamily AMJAP_1075 IPR008228 Uncharacterised conserved protein UCP006173 AMJAP_1075 IPR005358 Putative zinc- or iron-chelating domain containing protein AMJAP_1078 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_1078 IPR001478 PDZ domain AMJAP_1078 IPR005151 Tail specific protease AMJAP_1078 IPR020992 Tail specific protease, C-terminal AMJAP_1078 IPR004447 C-terminal-processing peptidase S41A AMJAP_1078 IPR040573 Tail specific protease, N-terminal domain AMJAP_1078 IPR036034 PDZ superfamily AMJAP_1079 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMJAP_1079 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AMJAP_1079 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily AMJAP_1080 IPR001948 Peptidase M18 AMJAP_1080 IPR022984 M18 family aminopeptidase 2, putative AMJAP_1080 IPR023358 Peptidase M18, domain 2 AMJAP_1081 IPR036986 RNA-binding S4 domain superfamily AMJAP_1081 IPR002942 RNA-binding S4 domain AMJAP_1081 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AMJAP_1081 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AMJAP_1081 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_1081 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AMJAP_1081 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_1082 IPR036670 SecA, preprotein cross-linking domain superfamily AMJAP_1082 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1082 IPR011130 SecA, preprotein cross-linking domain AMJAP_1082 IPR014018 SecA motor DEAD AMJAP_1082 IPR011115 SecA DEAD-like, N-terminal AMJAP_1082 IPR020937 SecA conserved site AMJAP_1082 IPR000185 Protein translocase subunit SecA AMJAP_1082 IPR004027 SEC-C motif AMJAP_1082 IPR036266 SecA, Wing/Scaffold superfamily AMJAP_1082 IPR011116 SecA Wing/Scaffold AMJAP_1086 IPR005950 Molybdate ABC transporter, substrate-binding protein AMJAP_1087 IPR011867 Molybdate ABC transporter, permease protein AMJAP_1087 IPR035906 MetI-like superfamily AMJAP_1087 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_1088 IPR015852 ABC transporter, molybdenum import, ModC AMJAP_1088 IPR017871 ABC transporter, conserved site AMJAP_1088 IPR008995 Molybdate/tungstate binding, C-terminal AMJAP_1088 IPR003439 ABC transporter-like AMJAP_1088 IPR005116 Transport-associated OB, type 1 AMJAP_1088 IPR003593 AAA+ ATPase domain AMJAP_1088 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1088 IPR004606 Molybdenum-pterin binding AMJAP_1088 IPR011868 Molybdate ABC transporter, ATP-binding protein AMJAP_1089 IPR035906 MetI-like superfamily AMJAP_1089 IPR006469 NifC-like ABC-type porter AMJAP_1089 IPR011867 Molybdate ABC transporter, permease protein AMJAP_1089 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_1090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_1090 IPR035906 MetI-like superfamily AMJAP_1092 IPR003439 ABC transporter-like AMJAP_1092 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA AMJAP_1092 IPR013611 Transport-associated OB, type 2 AMJAP_1092 IPR003593 AAA+ ATPase domain AMJAP_1092 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1092 IPR008995 Molybdate/tungstate binding, C-terminal AMJAP_1092 IPR017871 ABC transporter, conserved site AMJAP_1092 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AMJAP_1093 IPR003029 S1 domain AMJAP_1093 IPR040476 RNase II/RNase R, cold shock domain AMJAP_1093 IPR012340 Nucleic acid-binding, OB-fold AMJAP_1093 IPR013223 Ribonuclease B, N-terminal OB domain AMJAP_1093 IPR001900 Ribonuclease II/R AMJAP_1093 IPR022966 Ribonuclease II/R, conserved site AMJAP_1093 IPR004476 Ribonuclease II/ribonuclease R AMJAP_1093 IPR011805 Ribonuclease R AMJAP_1093 IPR011129 Cold shock domain AMJAP_1093 IPR022967 RNA-binding domain, S1 AMJAP_1093 IPR013668 Ribonuclease R winged-helix domain AMJAP_1094 IPR001633 EAL domain AMJAP_1094 IPR035919 EAL domain superfamily AMJAP_1094 IPR003018 GAF domain AMJAP_1094 IPR029016 GAF-like domain superfamily AMJAP_1094 IPR000160 GGDEF domain AMJAP_1094 IPR013515 Phytochrome, central region AMJAP_1094 IPR001294 Phytochrome AMJAP_1094 IPR016132 Phytochrome chromophore attachment domain AMJAP_1094 IPR029787 Nucleotide cyclase AMJAP_1095 IPR012941 Phenol hydroxylase, C-terminal dimerisation domain AMJAP_1095 IPR038220 Phenol hydroxylase, C-terminal TRX-fold domain superfamily AMJAP_1095 IPR036249 Thioredoxin-like superfamily AMJAP_1095 IPR002938 FAD-binding domain AMJAP_1095 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1097 IPR006694 Fatty acid hydroxylase AMJAP_1103 IPR003776 YcaO-like domain AMJAP_1103 IPR041080 YcaO cyclodehydratase, C-terminal AMJAP_1110 IPR036065 BolA-like superfamily AMJAP_1110 IPR002634 BolA protein AMJAP_1112 IPR003593 AAA+ ATPase domain AMJAP_1112 IPR011527 ABC transporter type 1, transmembrane domain AMJAP_1112 IPR039421 Type I protein exporter AMJAP_1112 IPR011917 ABC transporter, lipid A export, MsbA AMJAP_1112 IPR017871 ABC transporter, conserved site AMJAP_1112 IPR003439 ABC transporter-like AMJAP_1112 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1112 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMJAP_1113 IPR008816 Glycine zipper 2TM domain AMJAP_1115 IPR001650 Helicase, C-terminal AMJAP_1115 IPR010997 HRDC-like superfamily AMJAP_1115 IPR002121 HRDC domain AMJAP_1115 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1115 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMJAP_1115 IPR018982 RQC domain AMJAP_1115 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1115 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial AMJAP_1115 IPR004589 DNA helicase, ATP-dependent, RecQ type AMJAP_1115 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_1115 IPR011545 DEAD/DEAH box helicase domain AMJAP_1121 IPR011527 ABC transporter type 1, transmembrane domain AMJAP_1121 IPR003593 AAA+ ATPase domain AMJAP_1121 IPR003439 ABC transporter-like AMJAP_1121 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMJAP_1121 IPR017871 ABC transporter, conserved site AMJAP_1121 IPR010132 ATPase, type I secretion system, HlyB AMJAP_1121 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1121 IPR005074 Peptidase C39, bacteriocin processing AMJAP_1121 IPR039395 Peptidase C39-like A AMJAP_1121 IPR039421 Type I protein exporter AMJAP_1122 IPR010129 Type I secretion membrane fusion protein, HlyD family AMJAP_1122 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMJAP_1123 IPR010130 Type I secretion outer membrane protein, TolC AMJAP_1123 IPR003423 Outer membrane efflux protein AMJAP_1124 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase AMJAP_1124 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMJAP_1124 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_1124 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type AMJAP_1126 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_1126 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMJAP_1126 IPR014748 Enoyl-CoA hydratase, C-terminal AMJAP_1126 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_1128 IPR036909 Cytochrome c-like domain superfamily AMJAP_1128 IPR009056 Cytochrome c-like domain AMJAP_1132 IPR036909 Cytochrome c-like domain superfamily AMJAP_1132 IPR025710 L-cysteine S-thiosulfotransferase subunit SoxA AMJAP_1134 IPR008334 5'-Nucleotidase, C-terminal AMJAP_1134 IPR036907 5'-Nucleotidase, C-terminal domain superfamily AMJAP_1134 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMJAP_1134 IPR029052 Metallo-dependent phosphatase-like AMJAP_1134 IPR006179 5'-Nucleotidase/apyrase AMJAP_1136 IPR007411 Elongation factor P hydroxylase AMJAP_1138 IPR003782 Copper chaperone SCO1/SenC AMJAP_1138 IPR036249 Thioredoxin-like superfamily AMJAP_1140 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal AMJAP_1140 IPR006261 dNTP triphosphohydrolase AMJAP_1140 IPR023024 dNTP triphosphohydrolase, type 3 AMJAP_1140 IPR003607 HD/PDEase domain AMJAP_1140 IPR006674 HD domain AMJAP_1140 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily AMJAP_1141 IPR005872 Archaeal/bacterial translation initiation factor SUI1 AMJAP_1141 IPR036877 SUI1 domain superfamily AMJAP_1141 IPR001950 SUI1 domain AMJAP_1145 IPR002575 Aminoglycoside phosphotransferase AMJAP_1145 IPR011009 Protein kinase-like domain superfamily AMJAP_1145 IPR032882 SrkA/RdoA protein kinase AMJAP_1146 IPR023577 CYTH domain AMJAP_1146 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like AMJAP_1146 IPR033469 CYTH-like domain superfamily AMJAP_1147 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMJAP_1147 IPR002547 tRNA-binding domain AMJAP_1147 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_1147 IPR012340 Nucleic acid-binding, OB-fold AMJAP_1147 IPR029038 Methionyl-tRNA synthetase, Zn-domain AMJAP_1147 IPR015413 Methionyl/Leucyl tRNA synthetase AMJAP_1147 IPR033911 Methioninyl-tRNA synthetase core domain AMJAP_1147 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal AMJAP_1147 IPR014758 Methionyl-tRNA synthetase AMJAP_1147 IPR023458 Methionine-tRNA ligase, type 1 AMJAP_1147 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain AMJAP_1147 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMJAP_1149 IPR030390 RNA methyltransferase TrmA, active site AMJAP_1149 IPR030391 RNA methyltransferase TrmA, conserved site AMJAP_1149 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1149 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA AMJAP_1149 IPR010280 (Uracil-5)-methyltransferase family AMJAP_1150 IPR023775 Bifunctional protein Aas AMJAP_1150 IPR020845 AMP-binding, conserved site AMJAP_1150 IPR000873 AMP-dependent synthetase/ligase AMJAP_1150 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_1150 IPR002123 Phospholipid/glycerol acyltransferase AMJAP_1151 IPR022486 Polyphosphate kinase 2, PA0141 AMJAP_1151 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1151 IPR022488 Polyphosphate kinase-2-related AMJAP_1154 IPR003439 ABC transporter-like AMJAP_1154 IPR017871 ABC transporter, conserved site AMJAP_1154 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1154 IPR003593 AAA+ ATPase domain AMJAP_1157 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1157 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AMJAP_1157 IPR000808 Mrp, conserved site AMJAP_1157 IPR019591 Mrp/NBP35 ATP-binding protein AMJAP_1158 IPR033704 dUTPase, trimeric AMJAP_1158 IPR036157 dUTPase-like superfamily AMJAP_1158 IPR029054 dUTPase-like AMJAP_1158 IPR011962 dCTP deaminase AMJAP_1161 IPR035965 PAS domain superfamily AMJAP_1161 IPR000014 PAS domain AMJAP_1161 IPR001633 EAL domain AMJAP_1161 IPR035919 EAL domain superfamily AMJAP_1161 IPR000160 GGDEF domain AMJAP_1161 IPR005330 MHYT domain AMJAP_1161 IPR029787 Nucleotide cyclase AMJAP_1163 IPR010130 Type I secretion outer membrane protein, TolC AMJAP_1163 IPR003423 Outer membrane efflux protein AMJAP_1164 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMJAP_1164 IPR001036 Acriflavin resistance protein AMJAP_1165 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMJAP_1165 IPR006143 RND efflux pump, membrane fusion protein AMJAP_1165 IPR030190 Macrolide export protein MacA AMJAP_1166 IPR009057 Homeobox-like domain superfamily AMJAP_1166 IPR001647 DNA-binding HTH domain, TetR-type AMJAP_1166 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMJAP_1166 IPR011075 Tetracyclin repressor-like, C-terminal domain AMJAP_1167 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_1167 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_1167 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AMJAP_1167 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_1167 IPR004839 Aminotransferase, class I/classII AMJAP_1168 IPR001943 UVR domain AMJAP_1168 IPR006935 Helicase/UvrB, N-terminal AMJAP_1168 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1168 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_1168 IPR001650 Helicase, C-terminal AMJAP_1168 IPR041471 UvrB, interaction domain AMJAP_1168 IPR004807 UvrABC system, subunit B AMJAP_1168 IPR024759 UvrB, YAD/RRR-motif-containing domain AMJAP_1168 IPR036876 UVR domain superfamily AMJAP_1169 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_1169 IPR005467 Histidine kinase domain AMJAP_1169 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_1169 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMJAP_1169 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_1169 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_1169 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_1171 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1171 IPR011006 CheY-like superfamily AMJAP_1172 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_1172 IPR011006 CheY-like superfamily AMJAP_1172 IPR009057 Homeobox-like domain superfamily AMJAP_1172 IPR002197 DNA binding HTH domain, Fis-type AMJAP_1172 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1172 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1172 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_1172 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_1172 IPR003593 AAA+ ATPase domain AMJAP_1172 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_1173 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1173 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_1173 IPR003593 AAA+ ATPase domain AMJAP_1173 IPR011006 CheY-like superfamily AMJAP_1173 IPR009057 Homeobox-like domain superfamily AMJAP_1173 IPR002197 DNA binding HTH domain, Fis-type AMJAP_1173 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1173 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_1173 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_1173 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_1178 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 AMJAP_1178 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal AMJAP_1178 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain AMJAP_1178 IPR036291 NAD(P)-binding domain superfamily AMJAP_1178 IPR008141 Alanine dehydrogenase AMJAP_1179 IPR003313 AraC-type arabinose-binding/dimerisation domain AMJAP_1179 IPR009057 Homeobox-like domain superfamily AMJAP_1179 IPR018060 DNA binding HTH domain, AraC-type AMJAP_1179 IPR018062 HTH domain AraC-type, conserved site AMJAP_1179 IPR011051 RmlC-like cupin domain superfamily AMJAP_1179 IPR014710 RmlC-like jelly roll fold AMJAP_1181 IPR020449 Transcription regulator HTH, AraC- type AMJAP_1181 IPR018062 HTH domain AraC-type, conserved site AMJAP_1181 IPR018060 DNA binding HTH domain, AraC-type AMJAP_1181 IPR009057 Homeobox-like domain superfamily AMJAP_1183 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AMJAP_1183 IPR034937 Protocatechuate 4,5-dioxygenase beta chain AMJAP_1185 IPR006680 Amidohydrolase-related AMJAP_1185 IPR032466 Metal-dependent hydrolase AMJAP_1186 IPR007400 PrpF protein AMJAP_1187 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase AMJAP_1187 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AMJAP_1187 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMJAP_1188 IPR032466 Metal-dependent hydrolase AMJAP_1188 IPR006680 Amidohydrolase-related AMJAP_1188 IPR032465 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase AMJAP_1189 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1189 IPR000847 Transcription regulator HTH, LysR AMJAP_1189 IPR005119 LysR, substrate-binding AMJAP_1189 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1190 IPR000683 Oxidoreductase, N-terminal AMJAP_1190 IPR036291 NAD(P)-binding domain superfamily AMJAP_1191 IPR018170 Aldo/keto reductase, conserved site AMJAP_1191 IPR023210 NADP-dependent oxidoreductase domain AMJAP_1191 IPR036812 NADP-dependent oxidoreductase domain superfamily AMJAP_1191 IPR020471 Aldo/keto reductase AMJAP_1192 IPR018389 TRAP transporter solute receptor DctP/TeaA AMJAP_1192 IPR038404 TRAP transporter solute receptor DctP superfamily AMJAP_1194 IPR004681 TRAP transporter large membrane protein DctM AMJAP_1194 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_1197 IPR002938 FAD-binding domain AMJAP_1197 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1197 IPR012733 4-hydroxybenzoate 3-monooxygenase AMJAP_1198 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1198 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1198 IPR000847 Transcription regulator HTH, LysR AMJAP_1198 IPR005119 LysR, substrate-binding AMJAP_1203 IPR036249 Thioredoxin-like superfamily AMJAP_1203 IPR004045 Glutathione S-transferase, N-terminal AMJAP_1203 IPR040079 Glutathione Transferase family AMJAP_1203 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMJAP_1203 IPR010987 Glutathione S-transferase, C-terminal-like AMJAP_1204 IPR000847 Transcription regulator HTH, LysR AMJAP_1204 IPR005119 LysR, substrate-binding AMJAP_1204 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain AMJAP_1204 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1204 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1205 IPR036291 NAD(P)-binding domain superfamily AMJAP_1205 IPR014007 Acetoin reductase AMJAP_1205 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_1205 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_1206 IPR001853 DSBA-like thioredoxin domain AMJAP_1206 IPR014440 HCCA isomerase/glutathione S-transferase kappa AMJAP_1206 IPR036249 Thioredoxin-like superfamily AMJAP_1207 IPR005133 Na+/H+ antiporter subunit G AMJAP_1208 IPR007208 Na(+)/H(+) antiporter subunit F-like AMJAP_1209 IPR002758 Na+/H+ antiporter subunit E AMJAP_1210 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMJAP_1210 IPR004775 Na(+)/H(+) antiporter subunit D1 AMJAP_1211 IPR006673 Mnh complex subunit C1 AMJAP_1211 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AMJAP_1212 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMJAP_1212 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AMJAP_1212 IPR005281 Monovalent cation:proton antiporter, subunit B AMJAP_1212 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AMJAP_1212 IPR005663 Monovalent cation proton antiporter subunit A AMJAP_1212 IPR025383 Domain of unknown function DUF4040 AMJAP_1214 IPR029787 Nucleotide cyclase AMJAP_1214 IPR000160 GGDEF domain AMJAP_1219 IPR015387 LuxQ, periplasmic AMJAP_1219 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1219 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_1219 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_1219 IPR005467 Histidine kinase domain AMJAP_1219 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_1219 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_1219 IPR029151 Periplasmic sensor-like domain superfamily AMJAP_1219 IPR035965 PAS domain superfamily AMJAP_1219 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_1219 IPR011006 CheY-like superfamily AMJAP_1220 IPR035919 EAL domain superfamily AMJAP_1220 IPR001633 EAL domain AMJAP_1220 IPR029787 Nucleotide cyclase AMJAP_1220 IPR005330 MHYT domain AMJAP_1220 IPR000160 GGDEF domain AMJAP_1223 IPR001279 Metallo-beta-lactamase AMJAP_1223 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMJAP_1223 IPR013471 Ribonuclease Z/BN AMJAP_1224 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase AMJAP_1224 IPR029787 Nucleotide cyclase AMJAP_1225 IPR006675 HDIG domain AMJAP_1225 IPR006674 HD domain AMJAP_1225 IPR003607 HD/PDEase domain AMJAP_1225 IPR037522 HD-GYP domain AMJAP_1228 IPR018062 HTH domain AraC-type, conserved site AMJAP_1228 IPR018060 DNA binding HTH domain, AraC-type AMJAP_1228 IPR009057 Homeobox-like domain superfamily AMJAP_1228 IPR002818 DJ-1/PfpI AMJAP_1228 IPR029062 Class I glutamine amidotransferase-like AMJAP_1229 IPR036291 NAD(P)-binding domain superfamily AMJAP_1229 IPR003462 Ornithine cyclodeaminase/mu-crystallin AMJAP_1229 IPR023401 Ornithine cyclodeaminase, N-terminal AMJAP_1230 IPR023080 D-amino acid dehydrogenase DadA AMJAP_1230 IPR006076 FAD dependent oxidoreductase AMJAP_1230 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1239 IPR000620 EamA domain AMJAP_1240 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1240 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1240 IPR019888 Transcription regulator AsnC-type AMJAP_1240 IPR011008 Dimeric alpha-beta barrel AMJAP_1240 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMJAP_1240 IPR000485 AsnC-type HTH domain AMJAP_1240 IPR011991 ArsR-like helix-turn-helix domain AMJAP_1240 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMJAP_1241 IPR036291 NAD(P)-binding domain superfamily AMJAP_1241 IPR007780 NAD-glutamate dehydrogenase, bacteria AMJAP_1241 IPR028971 NAD-glutamate dehydrogenase AMJAP_1242 IPR038377 Sodium/glucose symporter superfamily AMJAP_1242 IPR018212 Sodium/solute symporter, conserved site AMJAP_1242 IPR011851 Sodium/proline symporter AMJAP_1242 IPR001734 Sodium/solute symporter AMJAP_1243 IPR013321 Arc-type ribbon-helix-helix AMJAP_1243 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_1243 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_1243 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_1243 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_1243 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 AMJAP_1243 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_1243 IPR010985 Ribbon-helix-helix AMJAP_1243 IPR002872 Proline dehydrogenase domain AMJAP_1243 IPR024082 Proline dehydrogenase PutA, domain II AMJAP_1243 IPR024089 Proline dehydrogenase PutA, domain I/II AMJAP_1243 IPR024090 Proline dehydrogenase PutA, domain I AMJAP_1243 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain AMJAP_1243 IPR015590 Aldehyde dehydrogenase domain AMJAP_1243 IPR029041 FAD-linked oxidoreductase-like AMJAP_1243 IPR025703 Bifunctional protein PutA AMJAP_1244 IPR000160 GGDEF domain AMJAP_1244 IPR029787 Nucleotide cyclase AMJAP_1244 IPR005330 MHYT domain AMJAP_1244 IPR035919 EAL domain superfamily AMJAP_1244 IPR001633 EAL domain AMJAP_1246 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1246 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1246 IPR001845 HTH ArsR-type DNA-binding domain AMJAP_1246 IPR011991 ArsR-like helix-turn-helix domain AMJAP_1249 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AMJAP_1249 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AMJAP_1249 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AMJAP_1249 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AMJAP_1249 IPR036291 NAD(P)-binding domain superfamily AMJAP_1249 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AMJAP_1252 IPR007341 Transglycosylase-associated protein AMJAP_1254 IPR009921 Domain of unknown function DUF1456 AMJAP_1257 IPR003719 Phenazine biosynthesis PhzF protein AMJAP_1258 IPR014710 RmlC-like jelly roll fold AMJAP_1258 IPR003313 AraC-type arabinose-binding/dimerisation domain AMJAP_1258 IPR011051 RmlC-like cupin domain superfamily AMJAP_1258 IPR018062 HTH domain AraC-type, conserved site AMJAP_1258 IPR018060 DNA binding HTH domain, AraC-type AMJAP_1258 IPR009057 Homeobox-like domain superfamily AMJAP_1261 IPR029787 Nucleotide cyclase AMJAP_1261 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region AMJAP_1261 IPR000160 GGDEF domain AMJAP_1264 IPR000524 Transcription regulator HTH, GntR AMJAP_1264 IPR008920 Transcription regulator FadR/GntR, C-terminal AMJAP_1264 IPR011711 GntR, C-terminal AMJAP_1264 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1264 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1265 IPR015038 Glutarate 2-hydroxylase GlaH AMJAP_1265 IPR042098 Taurine dioxygenase TauD-like superfamily AMJAP_1266 IPR030862 L-2-hydroxyglutarate dehydrogenase AMJAP_1266 IPR006076 FAD dependent oxidoreductase AMJAP_1266 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1267 IPR005119 LysR, substrate-binding AMJAP_1267 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1267 IPR000847 Transcription regulator HTH, LysR AMJAP_1267 IPR037424 Regulatory protein NocR, PBP2 domain AMJAP_1267 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1268 IPR005064 Bordetella uptake gene AMJAP_1268 IPR042100 Bordetella uptake gene, domain 1 AMJAP_1269 IPR002823 Protein of unknown function DUF112, transmembrane AMJAP_1271 IPR006175 YjgF/YER057c/UK114 family AMJAP_1271 IPR019897 RidA, conserved site AMJAP_1271 IPR035959 RutC-like superfamily AMJAP_1271 IPR035709 RutC family, YoaB-like AMJAP_1272 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1272 IPR006076 FAD dependent oxidoreductase AMJAP_1272 IPR023080 D-amino acid dehydrogenase DadA AMJAP_1274 IPR004626 RarD protein AMJAP_1274 IPR000620 EamA domain AMJAP_1275 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain AMJAP_1275 IPR002376 Formyl transferase, N-terminal AMJAP_1275 IPR002912 ACT domain AMJAP_1275 IPR004810 Formyltetrahydrofolate deformylase AMJAP_1275 IPR036477 Formyl transferase, N-terminal domain superfamily AMJAP_1277 IPR018303 P-type ATPase, phosphorylation site AMJAP_1277 IPR004014 Cation-transporting P-type ATPase, N-terminal AMJAP_1277 IPR008250 P-type ATPase, A domain superfamily AMJAP_1277 IPR023214 HAD superfamily AMJAP_1277 IPR001757 P-type ATPase AMJAP_1277 IPR023299 P-type ATPase, cytoplasmic domain N AMJAP_1277 IPR036412 HAD-like superfamily AMJAP_1277 IPR006068 Cation-transporting P-type ATPase, C-terminal AMJAP_1277 IPR023298 P-type ATPase, transmembrane domain superfamily AMJAP_1279 IPR038765 Papain-like cysteine peptidase superfamily AMJAP_1279 IPR000064 Endopeptidase, NLPC/P60 domain AMJAP_1281 IPR007346 Endonuclease I AMJAP_1282 IPR021800 Domain of unknown function DUF3369 AMJAP_1282 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1282 IPR003607 HD/PDEase domain AMJAP_1282 IPR011006 CheY-like superfamily AMJAP_1282 IPR037522 HD-GYP domain AMJAP_1283 IPR001633 EAL domain AMJAP_1283 IPR005330 MHYT domain AMJAP_1283 IPR035919 EAL domain superfamily AMJAP_1283 IPR000160 GGDEF domain AMJAP_1283 IPR029787 Nucleotide cyclase AMJAP_1284 IPR003593 AAA+ ATPase domain AMJAP_1284 IPR011527 ABC transporter type 1, transmembrane domain AMJAP_1284 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMJAP_1284 IPR003439 ABC transporter-like AMJAP_1284 IPR017871 ABC transporter, conserved site AMJAP_1284 IPR039421 Type I protein exporter AMJAP_1284 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1285 IPR005226 UPF0014 family AMJAP_1286 IPR000620 EamA domain AMJAP_1287 IPR001123 Amino acid exporter protein, LeuE-type AMJAP_1288 IPR013785 Aldolase-type TIM barrel AMJAP_1288 IPR004136 Nitronate monooxygenase AMJAP_1289 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMJAP_1290 IPR041628 ChlI/MoxR, AAA lid domain AMJAP_1290 IPR011703 ATPase, AAA-3 AMJAP_1290 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1292 IPR002931 Transglutaminase-like AMJAP_1292 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal AMJAP_1292 IPR038765 Papain-like cysteine peptidase superfamily AMJAP_1292 IPR025403 Domain of unknown function DUF4129 AMJAP_1294 IPR004090 Chemotaxis methyl-accepting receptor AMJAP_1294 IPR000727 Target SNARE coiled-coil homology domain AMJAP_1294 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_1294 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMJAP_1294 IPR003660 HAMP domain AMJAP_1297 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1297 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal AMJAP_1297 IPR030856 Sensor histidine kinase RcsC AMJAP_1297 IPR011006 CheY-like superfamily AMJAP_1297 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_1297 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_1297 IPR038388 RcsC, C-terminal domain superfamily AMJAP_1297 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_1297 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_1297 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_1297 IPR005467 Histidine kinase domain AMJAP_1298 IPR000792 Transcription regulator LuxR, C-terminal AMJAP_1298 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1298 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_1298 IPR011006 CheY-like superfamily AMJAP_1300 IPR000160 GGDEF domain AMJAP_1300 IPR035919 EAL domain superfamily AMJAP_1300 IPR029787 Nucleotide cyclase AMJAP_1300 IPR001633 EAL domain AMJAP_1300 IPR005330 MHYT domain AMJAP_1302 IPR003593 AAA+ ATPase domain AMJAP_1302 IPR003439 ABC transporter-like AMJAP_1302 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1302 IPR017871 ABC transporter, conserved site AMJAP_1307 IPR011006 CheY-like superfamily AMJAP_1307 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_1307 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_1307 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1307 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1307 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_1308 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_1308 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_1308 IPR003660 HAMP domain AMJAP_1308 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_1308 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_1308 IPR005467 Histidine kinase domain AMJAP_1308 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_1309 IPR010583 MltA-interacting MipA AMJAP_1311 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMJAP_1311 IPR001036 Acriflavin resistance protein AMJAP_1312 IPR009056 Cytochrome c-like domain AMJAP_1312 IPR030991 Cytochrome c-550 PedF AMJAP_1312 IPR036909 Cytochrome c-like domain superfamily AMJAP_1317 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family AMJAP_1317 IPR034119 PQQ-dependent type I alcohol dehydrogenase AMJAP_1317 IPR002372 Pyrrolo-quinoline quinone repeat AMJAP_1317 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMJAP_1317 IPR001479 Quinoprotein dehydrogenase, conserved site AMJAP_1317 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMJAP_1318 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1318 IPR007473 Ribosomal RNA large subunit methyltransferase J AMJAP_1318 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMJAP_1320 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region AMJAP_1320 IPR029787 Nucleotide cyclase AMJAP_1320 IPR000160 GGDEF domain AMJAP_1321 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1321 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1321 IPR000847 Transcription regulator HTH, LysR AMJAP_1321 IPR017685 HTH-type transcriptional regulator ArgP AMJAP_1321 IPR005119 LysR, substrate-binding AMJAP_1321 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria AMJAP_1322 IPR001123 Amino acid exporter protein, LeuE-type AMJAP_1322 IPR023445 Arginine exporter protein ArgO, enterobacteria AMJAP_1323 IPR035965 PAS domain superfamily AMJAP_1323 IPR013655 PAS fold-3 AMJAP_1323 IPR004090 Chemotaxis methyl-accepting receptor AMJAP_1323 IPR001610 PAC motif AMJAP_1323 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_1323 IPR000014 PAS domain AMJAP_1323 IPR003660 HAMP domain AMJAP_1324 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_1324 IPR015590 Aldehyde dehydrogenase domain AMJAP_1324 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_1324 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_1324 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_1324 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_1325 IPR035965 PAS domain superfamily AMJAP_1325 IPR000160 GGDEF domain AMJAP_1325 IPR001633 EAL domain AMJAP_1325 IPR035919 EAL domain superfamily AMJAP_1325 IPR000014 PAS domain AMJAP_1325 IPR029787 Nucleotide cyclase AMJAP_1327 IPR000352 Peptide chain release factor class I AMJAP_1329 IPR001279 Metallo-beta-lactamase AMJAP_1329 IPR011842 Coenzyme PQQ biosynthesis protein B AMJAP_1329 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMJAP_1330 IPR039068 Pyrroloquinoline-quinone synthase-like AMJAP_1330 IPR016084 Haem oxygenase-like, multi-helical AMJAP_1330 IPR004305 Thiaminase-2/PQQC AMJAP_1330 IPR011845 Coenzyme PQQ biosynthesis protein C AMJAP_1331 IPR041881 Coenzyme PQQ synthesis protein D superfamily AMJAP_1331 IPR008792 Coenzyme PQQ synthesis protein D AMJAP_1331 IPR022479 Coenzyme PQQ synthesis D, bacteria AMJAP_1332 IPR017200 Coenzyme PQQ synthesis protein E AMJAP_1332 IPR007197 Radical SAM AMJAP_1332 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria AMJAP_1332 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AMJAP_1332 IPR006638 Elp3/MiaB/NifB AMJAP_1332 IPR023885 4Fe4S-binding SPASM domain AMJAP_1332 IPR013785 Aldolase-type TIM barrel AMJAP_1333 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain AMJAP_1333 IPR029058 Alpha/Beta hydrolase fold AMJAP_1333 IPR011042 Six-bladed beta-propeller, TolB-like AMJAP_1334 IPR004624 PhnA protein AMJAP_1334 IPR013988 PhnA protein, C-terminal AMJAP_1334 IPR013987 PhnA protein, N-terminal AMJAP_1335 IPR011010 DNA breaking-rejoining enzyme, catalytic core AMJAP_1335 IPR013762 Integrase-like, catalytic domain superfamily AMJAP_1335 IPR002104 Integrase, catalytic domain AMJAP_1335 IPR004107 Integrase, SAM-like, N-terminal AMJAP_1335 IPR011946 Integrase, integron-type AMJAP_1335 IPR010998 Integrase/recombinase, N-terminal AMJAP_1342 IPR000952 AB hydrolase 4, conserved site AMJAP_1342 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_1342 IPR029058 Alpha/Beta hydrolase fold AMJAP_1342 IPR012020 AB hydrolase 4 family AMJAP_1344 IPR005302 Molybdenum cofactor sulfurase, C-terminal AMJAP_1344 IPR011037 Pyruvate kinase-like, insert domain superfamily AMJAP_1344 IPR005163 3-alpha domain AMJAP_1350 IPR036527 SCP2 sterol-binding domain superfamily AMJAP_1350 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT AMJAP_1350 IPR003033 SCP2 sterol-binding domain AMJAP_1350 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 AMJAP_1351 IPR001539 Peptidase U32 AMJAP_1352 IPR036206 Thiamin phosphate synthase superfamily AMJAP_1352 IPR001539 Peptidase U32 AMJAP_1354 IPR002563 Flavin reductase like domain AMJAP_1354 IPR012349 FMN-binding split barrel AMJAP_1363 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1363 IPR041628 ChlI/MoxR, AAA lid domain AMJAP_1363 IPR011703 ATPase, AAA-3 AMJAP_1366 IPR000620 EamA domain AMJAP_1369 IPR017938 Riboflavin synthase-like beta-barrel AMJAP_1369 IPR026017 Lumazine-binding domain AMJAP_1369 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AMJAP_1369 IPR001783 Lumazine-binding protein AMJAP_1370 IPR036291 NAD(P)-binding domain superfamily AMJAP_1370 IPR010099 Epimerase family protein SDR39U1 AMJAP_1370 IPR013549 Domain of unknown function DUF1731 AMJAP_1370 IPR001509 NAD-dependent epimerase/dehydratase AMJAP_1372 IPR007780 NAD-glutamate dehydrogenase, bacteria AMJAP_1372 IPR028971 NAD-glutamate dehydrogenase AMJAP_1372 IPR036291 NAD(P)-binding domain superfamily AMJAP_1374 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 AMJAP_1374 IPR005719 Dihydroorotate dehydrogenase, class 2 AMJAP_1374 IPR013785 Aldolase-type TIM barrel AMJAP_1374 IPR001295 Dihydroorotate dehydrogenase, conserved site AMJAP_1374 IPR005720 Dihydroorotate dehydrogenase domain AMJAP_1375 IPR007040 Ribosome modulation factor AMJAP_1375 IPR023200 Ribosome modulation factor domain superfamily AMJAP_1376 IPR019614 S-adenosylmethionine-dependent methyltransferase AMJAP_1376 IPR000241 Putative RNA methylase domain AMJAP_1376 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1376 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMJAP_1376 IPR004114 THUMP domain AMJAP_1376 IPR017244 Ribosomal RNA large subunit methyltransferase K/L AMJAP_1377 IPR029020 Ammonium/urea transporter AMJAP_1377 IPR024041 Ammonium transporter AmtB-like domain AMJAP_1377 IPR018047 Ammonium transporter, conserved site AMJAP_1377 IPR001905 Ammonium transporter AMJAP_1378 IPR036969 Citrate synthase superfamily AMJAP_1378 IPR010953 Citrate synthase, type I AMJAP_1378 IPR002020 Citrate synthase AMJAP_1378 IPR016142 Citrate synthase-like, large alpha subdomain AMJAP_1378 IPR024176 Citrate synthase, bacterial-type AMJAP_1378 IPR019810 Citrate synthase active site AMJAP_1378 IPR016143 Citrate synthase-like, small alpha subdomain AMJAP_1379 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site AMJAP_1379 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit AMJAP_1379 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit AMJAP_1379 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit AMJAP_1380 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor AMJAP_1380 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit AMJAP_1380 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit AMJAP_1381 IPR011281 Succinate dehydrogenase, flavoprotein subunit AMJAP_1381 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit AMJAP_1381 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMJAP_1381 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AMJAP_1381 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site AMJAP_1381 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1381 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AMJAP_1381 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMJAP_1382 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_1382 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_1382 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMJAP_1382 IPR012675 Beta-grasp domain superfamily AMJAP_1382 IPR009051 Alpha-helical ferredoxin AMJAP_1382 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein AMJAP_1382 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal AMJAP_1382 IPR036010 2Fe-2S ferredoxin-like superfamily AMJAP_1383 IPR005475 Transketolase-like, pyrimidine-binding domain AMJAP_1383 IPR029061 Thiamin diphosphate-binding fold AMJAP_1383 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily AMJAP_1383 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain AMJAP_1383 IPR011603 2-oxoglutarate dehydrogenase E1 component AMJAP_1383 IPR001017 Dehydrogenase, E1 component AMJAP_1383 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal AMJAP_1384 IPR036625 E3-binding domain superfamily AMJAP_1384 IPR006255 Dihydrolipoamide succinyltransferase AMJAP_1384 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMJAP_1384 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMJAP_1384 IPR004167 Peripheral subunit-binding domain AMJAP_1384 IPR011053 Single hybrid motif AMJAP_1384 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AMJAP_1384 IPR000089 Biotin/lipoyl attachment AMJAP_1385 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AMJAP_1385 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMJAP_1385 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMJAP_1385 IPR006258 Dihydrolipoamide dehydrogenase AMJAP_1385 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMJAP_1385 IPR023753 FAD/NAD(P)-binding domain AMJAP_1385 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1386 IPR013815 ATP-grasp fold, subdomain 1 AMJAP_1386 IPR005809 Succinate--CoA synthetase, beta subunit AMJAP_1386 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AMJAP_1386 IPR011761 ATP-grasp fold AMJAP_1386 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type AMJAP_1386 IPR016102 Succinyl-CoA synthetase-like AMJAP_1386 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site AMJAP_1387 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AMJAP_1387 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AMJAP_1387 IPR003781 CoA-binding AMJAP_1387 IPR005810 Succinyl-CoA ligase, alpha subunit AMJAP_1387 IPR005811 ATP-citrate lyase/succinyl-CoA ligase AMJAP_1387 IPR036291 NAD(P)-binding domain superfamily AMJAP_1387 IPR016102 Succinyl-CoA synthetase-like AMJAP_1393 IPR001123 Amino acid exporter protein, LeuE-type AMJAP_1395 IPR001650 Helicase, C-terminal AMJAP_1395 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMJAP_1395 IPR021046 Cold-shock protein, DEAD box A, C-terminal AMJAP_1395 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_1395 IPR028618 ATP-dependent RNA helicase DeaD AMJAP_1395 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMJAP_1395 IPR011545 DEAD/DEAH box helicase domain AMJAP_1395 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain AMJAP_1395 IPR014014 RNA helicase, DEAD-box type, Q motif AMJAP_1395 IPR034415 CsdA, RNA recognition motif AMJAP_1395 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1397 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain AMJAP_1397 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding AMJAP_1397 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1398 IPR013099 Potassium channel domain AMJAP_1398 IPR028325 Voltage-gated potassium channel AMJAP_1402 IPR002376 Formyl transferase, N-terminal AMJAP_1402 IPR001555 Phosphoribosylglycinamide formyltransferase, active site AMJAP_1402 IPR036477 Formyl transferase, N-terminal domain superfamily AMJAP_1402 IPR004607 Phosphoribosylglycinamide formyltransferase AMJAP_1403 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase AMJAP_1403 IPR036921 PurM-like, N-terminal domain superfamily AMJAP_1403 IPR016188 PurM-like, N-terminal domain AMJAP_1403 IPR036676 PurM-like, C-terminal domain superfamily AMJAP_1403 IPR010918 PurM-like, C-terminal domain AMJAP_1405 IPR002549 Transmembrane protein TqsA-like AMJAP_1406 IPR017788 DnaA regulatory inactivator Hda AMJAP_1406 IPR020591 Chromosomal replication control, initiator DnaA-like AMJAP_1406 IPR013317 Chromosomal replication initiator protein DnaA AMJAP_1406 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae AMJAP_1406 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1408 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_1408 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMJAP_1408 IPR006508 Pseudouridine synthase, RluA-like AMJAP_1408 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_1410 IPR000594 THIF-type NAD/FAD binding fold AMJAP_1410 IPR035985 Ubiquitin-activating enzyme AMJAP_1411 IPR029787 Nucleotide cyclase AMJAP_1411 IPR000160 GGDEF domain AMJAP_1412 IPR000192 Aminotransferase class V domain AMJAP_1412 IPR016454 Cysteine desulfurase AMJAP_1412 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_1412 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_1412 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_1412 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA AMJAP_1412 IPR010970 Cysteine desulfurase, SufS AMJAP_1414 IPR029039 Flavoprotein-like superfamily AMJAP_1414 IPR008254 Flavodoxin/nitric oxide synthase AMJAP_1414 IPR005025 NADPH-dependent FMN reductase-like AMJAP_1414 IPR001226 Flavodoxin, conserved site AMJAP_1414 IPR010089 Flavoprotein WrbA-like AMJAP_1415 IPR006659 Arsenate reductase AMJAP_1415 IPR006660 Arsenate reductase-like AMJAP_1415 IPR036249 Thioredoxin-like superfamily AMJAP_1416 IPR023679 Uncharacterised protein family UPF0761, bacterial AMJAP_1416 IPR017039 Virulence factor BrkB AMJAP_1417 IPR017968 Acylphosphatase, conserved site AMJAP_1417 IPR036046 Acylphosphatase-like domain superfamily AMJAP_1417 IPR001792 Acylphosphatase-like domain AMJAP_1417 IPR020456 Acylphosphatase AMJAP_1419 IPR007138 Antibiotic biosynthesis monooxygenase domain AMJAP_1419 IPR011008 Dimeric alpha-beta barrel AMJAP_1419 IPR023953 Heme oxygenase IsdG AMJAP_1421 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AMJAP_1421 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AMJAP_1421 IPR033730 Prokaryote proline-tRNA ligase core domain AMJAP_1421 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 AMJAP_1421 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type AMJAP_1421 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AMJAP_1421 IPR006195 Aminoacyl-tRNA synthetase, class II AMJAP_1421 IPR004154 Anticodon-binding AMJAP_1421 IPR036621 Anticodon-binding domain superfamily AMJAP_1421 IPR002316 Proline-tRNA ligase, class IIa AMJAP_1425 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AMJAP_1425 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMJAP_1425 IPR006686 Mechanosensitive ion channel MscS, conserved site AMJAP_1425 IPR008910 Conserved TM helix AMJAP_1425 IPR011066 Mechanosensitive ion channel MscS, C-terminal AMJAP_1425 IPR010920 LSM domain superfamily AMJAP_1425 IPR006685 Mechanosensitive ion channel MscS AMJAP_1427 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMJAP_1427 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMJAP_1427 IPR006089 Acyl-CoA dehydrogenase, conserved site AMJAP_1427 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMJAP_1427 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMJAP_1427 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMJAP_1427 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMJAP_1428 IPR023606 CoA-transferase family III domain superfamily AMJAP_1428 IPR003673 CoA-transferase family III AMJAP_1429 IPR000873 AMP-dependent synthetase/ligase AMJAP_1429 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_1429 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_1429 IPR020845 AMP-binding, conserved site AMJAP_1434 IPR009056 Cytochrome c-like domain AMJAP_1434 IPR036909 Cytochrome c-like domain superfamily AMJAP_1434 IPR002327 Cytochrome c, class IA/ IB AMJAP_1438 IPR011006 CheY-like superfamily AMJAP_1438 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1438 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1438 IPR000792 Transcription regulator LuxR, C-terminal AMJAP_1439 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_1439 IPR013767 PAS fold AMJAP_1439 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_1439 IPR000700 PAS-associated, C-terminal AMJAP_1439 IPR000014 PAS domain AMJAP_1439 IPR001610 PAC motif AMJAP_1439 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_1439 IPR005467 Histidine kinase domain AMJAP_1439 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_1439 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_1439 IPR035965 PAS domain superfamily AMJAP_1440 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_1440 IPR020845 AMP-binding, conserved site AMJAP_1440 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_1440 IPR000873 AMP-dependent synthetase/ligase AMJAP_1442 IPR001915 Peptidase M48 AMJAP_1442 IPR030873 Beta-barrel assembly-enhancing protease AMJAP_1442 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_1443 IPR001455 TusA-like domain AMJAP_1443 IPR036868 TusA-like domain superfamily AMJAP_1443 IPR022931 Sulfur carrier protein TusA AMJAP_1444 IPR002549 Transmembrane protein TqsA-like AMJAP_1445 IPR024706 Peroxiredoxin, AhpC-type AMJAP_1445 IPR036249 Thioredoxin-like superfamily AMJAP_1445 IPR013766 Thioredoxin domain AMJAP_1445 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMJAP_1446 IPR020624 Schiff base-forming aldolase, conserved site AMJAP_1446 IPR020625 Schiff base-forming aldolase, active site AMJAP_1446 IPR002220 DapA-like AMJAP_1446 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA AMJAP_1446 IPR013785 Aldolase-type TIM barrel AMJAP_1448 IPR036291 NAD(P)-binding domain superfamily AMJAP_1448 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMJAP_1448 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMJAP_1448 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMJAP_1449 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_1449 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_1449 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMJAP_1449 IPR006225 Pseudouridine synthase, RluC/RluD AMJAP_1450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1450 IPR002792 TRAM domain AMJAP_1450 IPR012340 Nucleic acid-binding, OB-fold AMJAP_1450 IPR030391 RNA methyltransferase TrmA, conserved site AMJAP_1450 IPR030390 RNA methyltransferase TrmA, active site AMJAP_1450 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD AMJAP_1450 IPR010280 (Uracil-5)-methyltransferase family AMJAP_1451 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AMJAP_1451 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AMJAP_1451 IPR017459 Glycosyl transferase family 3, N-terminal domain AMJAP_1451 IPR005940 Anthranilate phosphoribosyl transferase AMJAP_1451 IPR000312 Glycosyl transferase, family 3 AMJAP_1452 IPR004771 K+/H+ exchanger AMJAP_1452 IPR003148 Regulator of K+ conductance, N-terminal AMJAP_1452 IPR036291 NAD(P)-binding domain superfamily AMJAP_1452 IPR038770 Sodium/solute symporter superfamily AMJAP_1452 IPR020884 Glutathione-regulated potassium-efflux system protein KefB AMJAP_1452 IPR006153 Cation/H+ exchanger AMJAP_1453 IPR017726 Fe/S biogenesis protein NfuA AMJAP_1453 IPR035903 HesB-like domain superfamily AMJAP_1453 IPR034904 Fe-S cluster assembly domain superfamily AMJAP_1453 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal AMJAP_1453 IPR000361 FeS cluster biogenesis AMJAP_1454 IPR003959 ATPase, AAA-type, core AMJAP_1454 IPR027543 Lon protease, bacterial AMJAP_1454 IPR004815 Lon protease, bacterial/eukaryotic-type AMJAP_1454 IPR008269 Peptidase S16, Lon proteolytic domain AMJAP_1454 IPR027065 Lon protease AMJAP_1454 IPR003111 Lon, substrate-binding domain AMJAP_1454 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1454 IPR008268 Peptidase S16, active site AMJAP_1454 IPR015947 PUA-like superfamily AMJAP_1454 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_1454 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_1454 IPR003593 AAA+ ATPase domain AMJAP_1455 IPR000119 Histone-like DNA-binding protein AMJAP_1455 IPR020816 Histone-like DNA-binding protein, conserved site AMJAP_1455 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AMJAP_1456 IPR027304 Trigger factor/SurA domain superfamily AMJAP_1456 IPR015391 SurA N-terminal AMJAP_1456 IPR023034 Peptidyl-prolyl isomerase SurA AMJAP_1456 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AMJAP_1456 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AMJAP_1462 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1462 IPR003593 AAA+ ATPase domain AMJAP_1462 IPR003439 ABC transporter-like AMJAP_1462 IPR017871 ABC transporter, conserved site AMJAP_1462 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal AMJAP_1463 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_1463 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMJAP_1463 IPR035906 MetI-like superfamily AMJAP_1464 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_1464 IPR035906 MetI-like superfamily AMJAP_1465 IPR030678 Peptide/nickel binding protein, MppA-type AMJAP_1465 IPR039424 Solute-binding protein family 5 AMJAP_1465 IPR000914 Solute-binding protein family 5 domain AMJAP_1467 IPR008258 Transglycosylase SLT domain 1 AMJAP_1467 IPR000189 Prokaryotic transglycosylase, active site AMJAP_1467 IPR018392 LysM domain AMJAP_1467 IPR036779 LysM domain superfamily AMJAP_1467 IPR023346 Lysozyme-like domain superfamily AMJAP_1468 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMJAP_1468 IPR001279 Metallo-beta-lactamase AMJAP_1468 IPR017782 Hydroxyacylglutathione hydrolase AMJAP_1468 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain AMJAP_1468 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain AMJAP_1469 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1469 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMJAP_1469 IPR004033 UbiE/COQ5 methyltransferase AMJAP_1470 IPR022892 Ribonuclease HI AMJAP_1470 IPR036397 Ribonuclease H superfamily AMJAP_1470 IPR012337 Ribonuclease H-like superfamily AMJAP_1470 IPR002156 Ribonuclease H domain AMJAP_1471 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain AMJAP_1471 IPR036397 Ribonuclease H superfamily AMJAP_1471 IPR012337 Ribonuclease H-like superfamily AMJAP_1471 IPR006309 DNA polymerase 3, epsilon subunit AMJAP_1471 IPR013520 Exonuclease, RNase T/DNA polymerase III AMJAP_1472 IPR004671 Na+/H+ antiporter NhaB AMJAP_1473 IPR000086 NUDIX hydrolase domain AMJAP_1473 IPR015376 Zinc ribbon, NADH pyrophosphatase AMJAP_1473 IPR015797 NUDIX hydrolase-like domain superfamily AMJAP_1473 IPR015375 NADH pyrophosphatase-like, N-terminal AMJAP_1473 IPR022925 NADH pyrophosphatase NudC AMJAP_1475 IPR013703 Peptidase S49, N-terminal proteobacteria AMJAP_1475 IPR002142 Peptidase S49 AMJAP_1475 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_1477 IPR005490 L,D-transpeptidase catalytic domain AMJAP_1477 IPR038063 L,D-transpeptidase catalytic domain-like AMJAP_1477 IPR041597 L,D-transpeptidase C-terminal domain AMJAP_1478 IPR001764 Glycoside hydrolase, family 3, N-terminal AMJAP_1478 IPR017853 Glycoside hydrolase superfamily AMJAP_1478 IPR022956 Beta-hexosaminidase, bacterial AMJAP_1478 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily AMJAP_1478 IPR019800 Glycoside hydrolase, family 3, active site AMJAP_1479 IPR006685 Mechanosensitive ion channel MscS AMJAP_1479 IPR006686 Mechanosensitive ion channel MscS, conserved site AMJAP_1479 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AMJAP_1479 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMJAP_1479 IPR011066 Mechanosensitive ion channel MscS, C-terminal AMJAP_1479 IPR010920 LSM domain superfamily AMJAP_1482 IPR011545 DEAD/DEAH box helicase domain AMJAP_1482 IPR041471 UvrB, interaction domain AMJAP_1482 IPR037235 TRCF-like, C-terminal domain AMJAP_1482 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1482 IPR004576 Transcription-repair coupling factor AMJAP_1482 IPR001650 Helicase, C-terminal AMJAP_1482 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_1482 IPR003711 CarD-like/TRCF domain AMJAP_1482 IPR036101 CarD-like/TRCF domain superfamily AMJAP_1482 IPR005118 Transcription-repair-coupling factor, C-terminal domain AMJAP_1483 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AMJAP_1483 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AMJAP_1483 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AMJAP_1483 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AMJAP_1483 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AMJAP_1483 IPR036291 NAD(P)-binding domain superfamily AMJAP_1484 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain AMJAP_1484 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A AMJAP_1485 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD AMJAP_1485 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B AMJAP_1486 IPR007329 FMN-binding AMJAP_1486 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C AMJAP_1487 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D AMJAP_1487 IPR003667 NqrDE/RnfAE AMJAP_1488 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E AMJAP_1488 IPR003667 NqrDE/RnfAE AMJAP_1489 IPR017927 FAD-binding domain, ferredoxin reductase-type AMJAP_1489 IPR012675 Beta-grasp domain superfamily AMJAP_1489 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMJAP_1489 IPR036010 2Fe-2S ferredoxin-like superfamily AMJAP_1489 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMJAP_1489 IPR017938 Riboflavin synthase-like beta-barrel AMJAP_1489 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMJAP_1489 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMJAP_1489 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F AMJAP_1490 IPR024932 Flavin transferase ApbE AMJAP_1490 IPR042159 Flavin-trafficking protein ApbE AMJAP_1490 IPR003374 ApbE-like superfamily AMJAP_1492 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMJAP_1492 IPR022962 Soluble pyridine nucleotide transhydrogenase AMJAP_1492 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMJAP_1492 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1492 IPR023753 FAD/NAD(P)-binding domain AMJAP_1492 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMJAP_1496 IPR003838 ABC transporter permease protein domain AMJAP_1496 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E AMJAP_1496 IPR025857 MacB-like periplasmic core domain AMJAP_1497 IPR003439 ABC transporter-like AMJAP_1497 IPR017871 ABC transporter, conserved site AMJAP_1497 IPR015854 ABC transporter, lipoprotein release, LolD AMJAP_1497 IPR011924 Lipoprotein releasing system, ATP-binding protein AMJAP_1497 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1497 IPR003593 AAA+ ATPase domain AMJAP_1499 IPR004477 ComEC/Rec2-related protein AMJAP_1499 IPR004797 Competence protein ComEC/Rec2 AMJAP_1499 IPR001279 Metallo-beta-lactamase AMJAP_1499 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AMJAP_1499 IPR035681 ComA-like, MBL domain AMJAP_1500 IPR002898 MotA/TolQ/ExbB proton channel AMJAP_1501 IPR003400 Biopolymer transport protein ExbD/TolR AMJAP_1502 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1502 IPR003758 Tetraacyldisaccharide 4'-kinase AMJAP_1503 IPR005651 Trm112-like AMJAP_1504 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_1504 IPR003329 Acylneuraminate cytidylyltransferase AMJAP_1504 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase AMJAP_1508 IPR017867 Protein-tyrosine phosphatase, low molecular weight AMJAP_1508 IPR023485 Phosphotyrosine protein phosphatase I AMJAP_1508 IPR036196 Phosphotyrosine protein phosphatase I superfamily AMJAP_1509 IPR006094 FAD linked oxidase, N-terminal AMJAP_1509 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily AMJAP_1509 IPR016166 FAD-binding domain, PCMH-type AMJAP_1509 IPR016169 FAD-binding, type PCMH, subdomain 2 AMJAP_1509 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase AMJAP_1509 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal AMJAP_1509 IPR016167 FAD-binding, type PCMH, subdomain 1 AMJAP_1509 IPR036318 FAD-binding, type PCMH-like superfamily AMJAP_1510 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AMJAP_1510 IPR028878 Ribonuclease E AMJAP_1510 IPR004659 Ribonuclease E/G AMJAP_1510 IPR022967 RNA-binding domain, S1 AMJAP_1510 IPR003029 S1 domain AMJAP_1510 IPR012340 Nucleic acid-binding, OB-fold AMJAP_1510 IPR021968 Polyribonucleotide phosphorylase C-terminal AMJAP_1511 IPR006225 Pseudouridine synthase, RluC/RluD AMJAP_1511 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMJAP_1511 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_1511 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_1511 IPR002942 RNA-binding S4 domain AMJAP_1511 IPR036986 RNA-binding S4 domain superfamily AMJAP_1513 IPR005119 LysR, substrate-binding AMJAP_1513 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1513 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1513 IPR000847 Transcription regulator HTH, LysR AMJAP_1516 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_1516 IPR004681 TRAP transporter large membrane protein DctM AMJAP_1517 IPR006016 UspA AMJAP_1517 IPR006015 Universal stress protein A family AMJAP_1517 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_1518 IPR005119 LysR, substrate-binding AMJAP_1518 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1518 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1518 IPR000847 Transcription regulator HTH, LysR AMJAP_1519 IPR013976 Metal-dependent hydrolase HDOD AMJAP_1519 IPR001633 EAL domain AMJAP_1519 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AMJAP_1519 IPR035919 EAL domain superfamily AMJAP_1520 IPR016478 GTPase, MTG1 AMJAP_1520 IPR019991 GTP-binding protein, ribosome biogenesis AMJAP_1520 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily AMJAP_1520 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain AMJAP_1520 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1520 IPR006073 GTP binding domain AMJAP_1523 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like AMJAP_1523 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1523 IPR023166 HI0933-like insert domain superfamily AMJAP_1525 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT AMJAP_1525 IPR038266 NapC/NirT cytochrome c superfamily AMJAP_1525 IPR005126 NapC/NirT cytochrome c, N-terminal AMJAP_1525 IPR024717 Denitrification system component NapC/NirT/NrfH AMJAP_1525 IPR036280 Multiheme cytochrome superfamily AMJAP_1525 IPR011031 Multihaem cytochrome AMJAP_1526 IPR042054 YegD-like AMJAP_1526 IPR013126 Heat shock protein 70 family AMJAP_1526 IPR018181 Heat shock protein 70, conserved site AMJAP_1527 IPR005119 LysR, substrate-binding AMJAP_1527 IPR000847 Transcription regulator HTH, LysR AMJAP_1527 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1527 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1530 IPR005133 Na+/H+ antiporter subunit G AMJAP_1532 IPR006673 Mnh complex subunit C1 AMJAP_1532 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AMJAP_1533 IPR003918 NADH:ubiquinone oxidoreductase AMJAP_1533 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMJAP_1533 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 AMJAP_1534 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 AMJAP_1534 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMJAP_1534 IPR003918 NADH:ubiquinone oxidoreductase AMJAP_1536 IPR005663 Monovalent cation proton antiporter subunit A AMJAP_1536 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal AMJAP_1536 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AMJAP_1536 IPR025383 Domain of unknown function DUF4040 AMJAP_1536 IPR005281 Monovalent cation:proton antiporter, subunit B AMJAP_1536 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit AMJAP_1538 IPR041080 YcaO cyclodehydratase, C-terminal AMJAP_1538 IPR003776 YcaO-like domain AMJAP_1540 IPR005624 Haem-degrading AMJAP_1540 IPR038084 GlcG-like domain superfamily AMJAP_1542 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1542 IPR036269 Rho termination factor, N-terminal domain superfamily AMJAP_1542 IPR011129 Cold shock domain AMJAP_1542 IPR011113 Rho termination factor, RNA-binding domain AMJAP_1542 IPR004665 Transcription termination factor Rho AMJAP_1542 IPR041703 Transcription termination factor Rho, ATP binding domain AMJAP_1542 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMJAP_1542 IPR011112 Rho termination factor, N-terminal AMJAP_1542 IPR012340 Nucleic acid-binding, OB-fold AMJAP_1542 IPR003593 AAA+ ATPase domain AMJAP_1545 IPR014014 RNA helicase, DEAD-box type, Q motif AMJAP_1545 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMJAP_1545 IPR011545 DEAD/DEAH box helicase domain AMJAP_1545 IPR001650 Helicase, C-terminal AMJAP_1545 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_1545 IPR028622 ATP-dependent RNA helicase RhlE AMJAP_1545 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1548 IPR015868 Glutaminase AMJAP_1548 IPR012338 Beta-lactamase/transpeptidase-like AMJAP_1551 IPR022147 Glutamine synthetase type III N-terminal AMJAP_1551 IPR027303 Glutamine synthetase, glycine-rich site AMJAP_1551 IPR008146 Glutamine synthetase, catalytic domain AMJAP_1551 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMJAP_1551 IPR040577 Glutamine synthetase, C-terminal AMJAP_1552 IPR004680 Citrate transporter-like domain AMJAP_1553 IPR015590 Aldehyde dehydrogenase domain AMJAP_1553 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_1553 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_1553 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_1553 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_1556 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMJAP_1556 IPR036163 Heavy metal-associated domain superfamily AMJAP_1556 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMJAP_1556 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMJAP_1556 IPR017969 Heavy-metal-associated, conserved site AMJAP_1556 IPR006121 Heavy metal-associated domain, HMA AMJAP_1556 IPR021179 Mercury(II) reductase AMJAP_1556 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AMJAP_1556 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1556 IPR023753 FAD/NAD(P)-binding domain AMJAP_1557 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site AMJAP_1557 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMJAP_1557 IPR036291 NAD(P)-binding domain superfamily AMJAP_1557 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMJAP_1557 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase AMJAP_1558 IPR005215 Trigger factor AMJAP_1558 IPR027304 Trigger factor/SurA domain superfamily AMJAP_1558 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMJAP_1558 IPR008881 Trigger factor, ribosome-binding, bacterial AMJAP_1558 IPR036611 Trigger factor ribosome-binding domain superfamily AMJAP_1558 IPR037041 Trigger factor, C-terminal domain superfamily AMJAP_1558 IPR008880 Trigger factor, C-terminal AMJAP_1559 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_1559 IPR018215 ClpP, Ser active site AMJAP_1559 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMJAP_1559 IPR001907 ATP-dependent Clp protease proteolytic subunit AMJAP_1559 IPR033135 ClpP, histidine active site AMJAP_1560 IPR003959 ATPase, AAA-type, core AMJAP_1560 IPR019489 Clp ATPase, C-terminal AMJAP_1560 IPR004487 Clp protease, ATP-binding subunit ClpX AMJAP_1560 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1560 IPR010603 Zinc finger, ClpX C4-type AMJAP_1560 IPR038366 Zinc finger, ClpX C4-type superfamily AMJAP_1560 IPR003593 AAA+ ATPase domain AMJAP_1561 IPR026564 Transcriptional regulator TACO1-like, domain 3 AMJAP_1561 IPR029072 YebC-like AMJAP_1561 IPR002876 Transcriptional regulator TACO1-like AMJAP_1561 IPR017856 Integrase-like, N-terminal AMJAP_1563 IPR029787 Nucleotide cyclase AMJAP_1563 IPR000160 GGDEF domain AMJAP_1563 IPR007894 MASE2 AMJAP_1565 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V AMJAP_1565 IPR011057 Mss4-like superfamily AMJAP_1574 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type AMJAP_1574 IPR028923 SAICAR synthetase/ADE2, N-terminal AMJAP_1575 IPR036259 MFS transporter superfamily AMJAP_1575 IPR020846 Major facilitator superfamily domain AMJAP_1575 IPR011701 Major facilitator superfamily AMJAP_1575 IPR004638 Drug resistance transporter EmrB-like AMJAP_1576 IPR026530 Phosphoenolpyruvate synthase regulatory protein AMJAP_1576 IPR005177 Bifunctional kinase-pyrophosphorylase AMJAP_1577 IPR023151 PEP-utilising enzyme, conserved site AMJAP_1577 IPR013815 ATP-grasp fold, subdomain 1 AMJAP_1577 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMJAP_1577 IPR006319 Phosphoenolpyruvate synthase AMJAP_1577 IPR018274 PEP-utilising enzyme, active site AMJAP_1577 IPR040442 Pyruvate kinase-like domain superfamily AMJAP_1577 IPR036637 Phosphohistidine domain superfamily AMJAP_1577 IPR000121 PEP-utilising enzyme, C-terminal AMJAP_1577 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding AMJAP_1577 IPR008279 PEP-utilising enzyme, mobile domain AMJAP_1578 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_1578 IPR036986 RNA-binding S4 domain superfamily AMJAP_1578 IPR002942 RNA-binding S4 domain AMJAP_1578 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AMJAP_1578 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AMJAP_1578 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AMJAP_1578 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_1579 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_1579 IPR001173 Glycosyltransferase 2-like AMJAP_1579 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase AMJAP_1587 IPR002725 Protein of unknown function DUF45 AMJAP_1589 IPR006683 Thioesterase domain AMJAP_1589 IPR003736 Phenylacetic acid degradation-related domain AMJAP_1589 IPR029069 HotDog domain superfamily AMJAP_1591 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1591 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1591 IPR000524 Transcription regulator HTH, GntR AMJAP_1591 IPR004839 Aminotransferase, class I/classII AMJAP_1591 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_1591 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_1592 IPR020449 Transcription regulator HTH, AraC- type AMJAP_1592 IPR018060 DNA binding HTH domain, AraC-type AMJAP_1592 IPR009057 Homeobox-like domain superfamily AMJAP_1592 IPR018062 HTH domain AraC-type, conserved site AMJAP_1595 IPR031312 Sodium/sulphate symporter, conserved site AMJAP_1595 IPR004680 Citrate transporter-like domain AMJAP_1595 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily AMJAP_1595 IPR006037 Regulator of K+ conductance, C-terminal AMJAP_1596 IPR029069 HotDog domain superfamily AMJAP_1596 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase AMJAP_1596 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain AMJAP_1596 IPR006683 Thioesterase domain AMJAP_1597 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1597 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1597 IPR005119 LysR, substrate-binding AMJAP_1597 IPR000847 Transcription regulator HTH, LysR AMJAP_1598 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_1598 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_1598 IPR016166 FAD-binding domain, PCMH-type AMJAP_1598 IPR036318 FAD-binding, type PCMH-like superfamily AMJAP_1598 IPR006094 FAD linked oxidase, N-terminal AMJAP_1598 IPR004113 FAD-linked oxidase, C-terminal AMJAP_1598 IPR009051 Alpha-helical ferredoxin AMJAP_1598 IPR016164 FAD-linked oxidase-like, C-terminal AMJAP_1600 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily AMJAP_1600 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein AMJAP_1600 IPR010203 Regulator of ribonuclease activity A AMJAP_1601 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMJAP_1601 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding AMJAP_1601 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMJAP_1601 IPR006311 Twin-arginine translocation pathway, signal sequence AMJAP_1601 IPR037092 Flavocytochrome c sulphide dehydrogenase, flavin-binding domain superfamily AMJAP_1601 IPR023753 FAD/NAD(P)-binding domain AMJAP_1601 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1603 IPR037512 Phosphoglycolate phosphatase, prokaryotic AMJAP_1603 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic AMJAP_1603 IPR023198 Phosphoglycolate phosphatase-like, domain 2 AMJAP_1603 IPR036412 HAD-like superfamily AMJAP_1603 IPR023214 HAD superfamily AMJAP_1603 IPR041492 Haloacid dehalogenase-like hydrolase AMJAP_1603 IPR006439 HAD hydrolase, subfamily IA AMJAP_1604 IPR004635 Peptidase S49, SppA AMJAP_1604 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_1604 IPR002142 Peptidase S49 AMJAP_1606 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AMJAP_1606 IPR038765 Papain-like cysteine peptidase superfamily AMJAP_1607 IPR038765 Papain-like cysteine peptidase superfamily AMJAP_1607 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AMJAP_1608 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein AMJAP_1608 IPR029001 Inosine triphosphate pyrophosphatase-like AMJAP_1609 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria AMJAP_1609 IPR003772 Large ribosomal RNA subunit accumulation protein YceD AMJAP_1610 IPR002677 Ribosomal protein L32p AMJAP_1610 IPR011332 Zinc-binding ribosomal protein AMJAP_1611 IPR012281 Phospholipid biosynthesis protein, PlsX-like AMJAP_1611 IPR003664 Fatty acid synthesis PlsX protein AMJAP_1612 IPR001227 Acyl transferase domain superfamily AMJAP_1612 IPR014043 Acyl transferase AMJAP_1612 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMJAP_1612 IPR024925 Malonyl CoA-acyl carrier protein transacylase AMJAP_1612 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type AMJAP_1612 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMJAP_1613 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_1613 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_1613 IPR036291 NAD(P)-binding domain superfamily AMJAP_1613 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase AMJAP_1614 IPR006162 Phosphopantetheine attachment site AMJAP_1614 IPR009081 Phosphopantetheine binding ACP domain AMJAP_1614 IPR003231 Acyl carrier protein (ACP) AMJAP_1614 IPR036736 ACP-like superfamily AMJAP_1615 IPR018201 Beta-ketoacyl synthase, active site AMJAP_1615 IPR016039 Thiolase-like AMJAP_1615 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 AMJAP_1615 IPR014030 Beta-ketoacyl synthase, N-terminal AMJAP_1615 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMJAP_1615 IPR014031 Beta-ketoacyl synthase, C-terminal AMJAP_1615 IPR000794 Beta-ketoacyl synthase AMJAP_1616 IPR036038 Aminotransferase-like, PLP-dependent enzymes AMJAP_1616 IPR001544 Aminotransferase class IV AMJAP_1616 IPR018300 Aminotransferase, class IV, conserved site AMJAP_1616 IPR017824 Aminodeoxychorismate lyase, class IV AMJAP_1617 IPR003770 Endolytic murein transglycosylase AMJAP_1618 IPR018094 Thymidylate kinase AMJAP_1618 IPR039430 Thymidylate kinase-like domain AMJAP_1618 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1619 IPR004622 DNA polymerase III, delta prime subunit AMJAP_1619 IPR015199 DNA polymerase III, delta subunit, C-terminal AMJAP_1619 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1621 IPR001130 TatD family AMJAP_1621 IPR032466 Metal-dependent hydrolase AMJAP_1621 IPR015991 Uncharacterised hydrolase TatD-type AMJAP_1621 IPR018228 Deoxyribonuclease, TatD-related, conserved site AMJAP_1623 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal AMJAP_1623 IPR022383 Lactate/malate dehydrogenase, C-terminal AMJAP_1623 IPR001557 L-lactate/malate dehydrogenase AMJAP_1623 IPR001252 Malate dehydrogenase, active site AMJAP_1623 IPR010945 Malate dehydrogenase, type 2 AMJAP_1623 IPR036291 NAD(P)-binding domain superfamily AMJAP_1623 IPR001236 Lactate/malate dehydrogenase, N-terminal AMJAP_1624 IPR035917 YjbQ-like superfamily AMJAP_1624 IPR001602 Uncharacterised protein family UPF0047 AMJAP_1625 IPR039315 Chemotaxis protein CheW AMJAP_1625 IPR036061 CheW-like domain superfamily AMJAP_1625 IPR002545 CheW-like domain AMJAP_1626 IPR036237 Xylose isomerase-like superfamily AMJAP_1626 IPR013022 Xylose isomerase-like, TIM barrel domain AMJAP_1626 IPR017643 Hydroxypyruvate isomerase AMJAP_1626 IPR026040 Hydroxypyruvate isomerase-like AMJAP_1627 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMJAP_1627 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_1627 IPR006398 2-hydroxy-3-oxopropionate reductase AMJAP_1627 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMJAP_1627 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMJAP_1627 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMJAP_1627 IPR036291 NAD(P)-binding domain superfamily AMJAP_1627 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMJAP_1628 IPR007453 Sulphur transfer protein DsrC/TusE AMJAP_1628 IPR042072 DsrC-like protein, C-terminal domain AMJAP_1628 IPR025526 DsrC-like domain superfamily AMJAP_1629 IPR023526 Sulphur relay, TusB AMJAP_1629 IPR007215 Sulphur relay, TusB/DsrH AMJAP_1629 IPR027396 DsrEFH-like AMJAP_1630 IPR017462 Sulphur relay, TusC/DsrF AMJAP_1630 IPR003787 Sulphur relay, DsrE/F-like protein AMJAP_1630 IPR027396 DsrEFH-like AMJAP_1631 IPR027396 DsrEFH-like AMJAP_1631 IPR003787 Sulphur relay, DsrE/F-like protein AMJAP_1631 IPR017463 Sulphur relay, TusD/DsrE AMJAP_1632 IPR006214 Bax inhibitor 1-related AMJAP_1632 IPR006213 Bax inhibitor 1, conserved site AMJAP_1633 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_1633 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMJAP_1633 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_1635 IPR010049 MTA/SAH nucleosidase AMJAP_1635 IPR000845 Nucleoside phosphorylase domain AMJAP_1635 IPR035994 Nucleoside phosphorylase superfamily AMJAP_1636 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_1636 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_1636 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase AMJAP_1636 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_1636 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMJAP_1636 IPR000192 Aminotransferase class V domain AMJAP_1637 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMJAP_1637 IPR023555 Thiol-disulphide oxidoreductase ResA AMJAP_1637 IPR036249 Thioredoxin-like superfamily AMJAP_1637 IPR013766 Thioredoxin domain AMJAP_1638 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMJAP_1638 IPR036291 NAD(P)-binding domain superfamily AMJAP_1638 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMJAP_1638 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMJAP_1638 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMJAP_1638 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMJAP_1638 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_1641 IPR000305 GIY-YIG endonuclease AMJAP_1641 IPR001943 UVR domain AMJAP_1641 IPR038476 UvrC homology region 2 superfamily AMJAP_1641 IPR001162 UvrC family homology region AMJAP_1641 IPR004791 UvrABC system, subunit C AMJAP_1641 IPR010994 RuvA domain 2-like AMJAP_1641 IPR035901 GIY-YIG endonuclease superfamily AMJAP_1641 IPR036876 UVR domain superfamily AMJAP_1641 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMJAP_1642 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase AMJAP_1642 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial AMJAP_1642 IPR000462 CDP-alcohol phosphatidyltransferase AMJAP_1643 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain AMJAP_1643 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain AMJAP_1643 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site AMJAP_1643 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family AMJAP_1643 IPR036291 NAD(P)-binding domain superfamily AMJAP_1643 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I AMJAP_1646 IPR011006 CheY-like superfamily AMJAP_1646 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_1646 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1646 IPR000792 Transcription regulator LuxR, C-terminal AMJAP_1658 IPR020845 AMP-binding, conserved site AMJAP_1658 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_1658 IPR000873 AMP-dependent synthetase/ligase AMJAP_1658 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_1659 IPR012156 Cold shock, CspA AMJAP_1659 IPR011129 Cold shock domain AMJAP_1659 IPR019844 Cold-shock (CSD) domain AMJAP_1659 IPR012340 Nucleic acid-binding, OB-fold AMJAP_1659 IPR002059 Cold-shock protein, DNA-binding AMJAP_1660 IPR013767 PAS fold AMJAP_1660 IPR035965 PAS domain superfamily AMJAP_1660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_1660 IPR000700 PAS-associated, C-terminal AMJAP_1660 IPR000014 PAS domain AMJAP_1660 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_1660 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_1660 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_1660 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_1660 IPR005467 Histidine kinase domain AMJAP_1662 IPR002925 Dienelactone hydrolase AMJAP_1662 IPR029058 Alpha/Beta hydrolase fold AMJAP_1663 IPR036694 Dodecin-like superfamily AMJAP_1663 IPR025543 Dodecin-like AMJAP_1663 IPR009923 Dodecin AMJAP_1664 IPR039418 LexA-like AMJAP_1664 IPR036286 LexA/Signal peptidase-like superfamily AMJAP_1664 IPR015927 Peptidase S24/S26A/S26B/S26C AMJAP_1664 IPR006197 Peptidase S24, LexA-like AMJAP_1665 IPR025188 Domain of unknown function DUF4113 AMJAP_1665 IPR017961 DNA polymerase, Y-family, little finger domain AMJAP_1665 IPR024728 DNA polymerase type-Y, HhH motif AMJAP_1665 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AMJAP_1665 IPR001126 UmuC domain AMJAP_1667 IPR008915 Peptidase M50 AMJAP_1667 IPR036034 PDZ superfamily AMJAP_1667 IPR041489 PDZ domain 6 AMJAP_1667 IPR001478 PDZ domain AMJAP_1668 IPR005330 MHYT domain AMJAP_1668 IPR029787 Nucleotide cyclase AMJAP_1668 IPR001633 EAL domain AMJAP_1668 IPR035919 EAL domain superfamily AMJAP_1668 IPR000160 GGDEF domain AMJAP_1669 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_1669 IPR036291 NAD(P)-binding domain superfamily AMJAP_1669 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_1672 IPR011614 Catalase core domain AMJAP_1672 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 AMJAP_1672 IPR024708 Catalase active site AMJAP_1672 IPR018028 Catalase, mono-functional, haem-containing AMJAP_1672 IPR020835 Catalase superfamily AMJAP_1672 IPR010582 Catalase immune-responsive domain AMJAP_1672 IPR002226 Catalase haem-binding site AMJAP_1672 IPR037060 Catalase core domain superfamily AMJAP_1672 IPR040333 Catalase, clade 3 AMJAP_1674 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AMJAP_1674 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_1674 IPR020845 AMP-binding, conserved site AMJAP_1674 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_1674 IPR000873 AMP-dependent synthetase/ligase AMJAP_1675 IPR009010 Aspartate decarboxylase-like domain superfamily AMJAP_1675 IPR003190 Aspartate decarboxylase AMJAP_1676 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMJAP_1676 IPR011822 Cobalamin-dependent methionine synthase AMJAP_1676 IPR006158 Cobalamin (vitamin B12)-binding domain AMJAP_1676 IPR036724 Cobalamin-binding domain superfamily AMJAP_1676 IPR011005 Dihydropteroate synthase-like AMJAP_1676 IPR003726 Homocysteine-binding domain AMJAP_1676 IPR036594 Methionine synthase domain AMJAP_1676 IPR036589 Homocysteine-binding domain superfamily AMJAP_1676 IPR000489 Pterin-binding domain AMJAP_1676 IPR033706 Methionine synthase, B12-binding domain AMJAP_1676 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily AMJAP_1676 IPR004223 Vitamin B12-dependent methionine synthase, activation domain AMJAP_1679 IPR001264 Glycosyl transferase, family 51 AMJAP_1679 IPR023346 Lysozyme-like domain superfamily AMJAP_1679 IPR011812 Biosynthetic peptidoglycan transglycosylase AMJAP_1679 IPR036950 Penicillin binding protein transglycosylase domain AMJAP_1682 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AMJAP_1682 IPR011765 Peptidase M16, N-terminal AMJAP_1682 IPR007863 Peptidase M16, C-terminal AMJAP_1682 IPR013578 Peptidase M16C associated AMJAP_1684 IPR002938 FAD-binding domain AMJAP_1684 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1684 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AMJAP_1684 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AMJAP_1685 IPR001633 EAL domain AMJAP_1685 IPR013976 Metal-dependent hydrolase HDOD AMJAP_1685 IPR035919 EAL domain superfamily AMJAP_1685 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AMJAP_1686 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AMJAP_1686 IPR033729 Serine-tRNA ligase catalytic core domain AMJAP_1686 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily AMJAP_1686 IPR015866 Serine-tRNA synthetase, type1, N-terminal AMJAP_1686 IPR002317 Serine-tRNA ligase, type1 AMJAP_1686 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AMJAP_1686 IPR006195 Aminoacyl-tRNA synthetase, class II AMJAP_1687 IPR003691 Putative fluoride ion transporter CrcB AMJAP_1688 IPR032423 AAA C-terminal domain AMJAP_1688 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1688 IPR003959 ATPase, AAA-type, core AMJAP_1688 IPR021886 MgsA AAA+ ATPase C-terminal AMJAP_1688 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal AMJAP_1688 IPR003593 AAA+ ATPase domain AMJAP_1689 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria AMJAP_1689 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AMJAP_1689 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMJAP_1690 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1690 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1690 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1690 IPR018541 FtsK gamma domain AMJAP_1690 IPR041027 FtsK alpha domain AMJAP_1690 IPR025199 DNA translocase FtsK, 4TM region AMJAP_1690 IPR002543 FtsK domain AMJAP_1691 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site AMJAP_1691 IPR005982 Thioredoxin reductase AMJAP_1691 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1691 IPR023753 FAD/NAD(P)-binding domain AMJAP_1692 IPR016181 Acyl-CoA N-acyltransferase AMJAP_1692 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase AMJAP_1692 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal AMJAP_1693 IPR017138 Aspartate/glutamate leucyltransferase AMJAP_1693 IPR030700 N-end rule aminoacyl transferase AMJAP_1693 IPR007472 N-end rule aminoacyl transferase, C-terminal AMJAP_1693 IPR016181 Acyl-CoA N-acyltransferase AMJAP_1693 IPR007471 N-end aminoacyl transferase, N-terminal AMJAP_1694 IPR006196 RNA-binding domain, S1, IF1 type AMJAP_1694 IPR012340 Nucleic acid-binding, OB-fold AMJAP_1694 IPR022967 RNA-binding domain, S1 AMJAP_1694 IPR004368 Translation initiation factor IF-1 AMJAP_1695 IPR018368 ClpA/B, conserved site 1 AMJAP_1695 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1695 IPR041546 ClpA/ClpB, AAA lid domain AMJAP_1695 IPR028299 ClpA/B, conserved site 2 AMJAP_1695 IPR001270 ClpA/B family AMJAP_1695 IPR003593 AAA+ ATPase domain AMJAP_1695 IPR003959 ATPase, AAA-type, core AMJAP_1695 IPR019489 Clp ATPase, C-terminal AMJAP_1695 IPR036628 Clp, N-terminal domain superfamily AMJAP_1695 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA AMJAP_1695 IPR004176 Clp, N-terminal AMJAP_1696 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMJAP_1696 IPR003769 Adaptor protein ClpS, core AMJAP_1696 IPR022935 ATP-dependent Clp protease adaptor protein ClpS AMJAP_1697 IPR019844 Cold-shock (CSD) domain AMJAP_1697 IPR012751 CspD, cold shock AMJAP_1697 IPR002059 Cold-shock protein, DNA-binding AMJAP_1697 IPR011129 Cold shock domain AMJAP_1697 IPR012156 Cold shock, CspA AMJAP_1697 IPR012340 Nucleic acid-binding, OB-fold AMJAP_1698 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AMJAP_1698 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_1698 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_1698 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AMJAP_1698 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AMJAP_1699 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily AMJAP_1699 IPR003448 Molybdopterin biosynthesis MoaE AMJAP_1700 IPR000086 NUDIX hydrolase domain AMJAP_1700 IPR020084 NUDIX hydrolase, conserved site AMJAP_1700 IPR015797 NUDIX hydrolase-like domain superfamily AMJAP_1700 IPR033713 Phosphatase NudJ AMJAP_1700 IPR020476 NUDIX hydrolase AMJAP_1701 IPR004506 tRNA-specific 2-thiouridylase AMJAP_1701 IPR023382 Adenine nucleotide alpha hydrolase-like domains AMJAP_1701 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_1702 IPR035932 HflD-like superfamily AMJAP_1702 IPR007451 High frequency lysogenization protein HflD AMJAP_1703 IPR008948 L-Aspartase-like AMJAP_1703 IPR004769 Adenylosuccinate lyase AMJAP_1703 IPR013539 Adenylosuccinate lyase PurB, C-terminal AMJAP_1703 IPR024083 Fumarase/histidase, N-terminal AMJAP_1703 IPR020557 Fumarate lyase, conserved site AMJAP_1703 IPR022761 Fumarate lyase, N-terminal AMJAP_1703 IPR000362 Fumarate lyase family AMJAP_1704 IPR000639 Epoxide hydrolase-like AMJAP_1704 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_1704 IPR029058 Alpha/Beta hydrolase fold AMJAP_1705 IPR004384 RNA methyltransferase TrmJ/LasT AMJAP_1705 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMJAP_1705 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMJAP_1705 IPR029028 Alpha/beta knot methyltransferases AMJAP_1706 IPR039994 JmjC domain-containing AMJAP_1706 IPR003347 JmjC domain AMJAP_1707 IPR005119 LysR, substrate-binding AMJAP_1707 IPR000847 Transcription regulator HTH, LysR AMJAP_1707 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1707 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1708 IPR039556 ICL/PEPM domain AMJAP_1708 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMJAP_1708 IPR006254 Isocitrate lyase AMJAP_1708 IPR040442 Pyruvate kinase-like domain superfamily AMJAP_1710 IPR039556 ICL/PEPM domain AMJAP_1710 IPR006254 Isocitrate lyase AMJAP_1710 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMJAP_1710 IPR040442 Pyruvate kinase-like domain superfamily AMJAP_1711 IPR036259 MFS transporter superfamily AMJAP_1711 IPR010645 Uncharacterised MFS-type transporter YbfB AMJAP_1712 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AMJAP_1712 IPR005618 Outer membrane protein, OmpW AMJAP_1714 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMJAP_1714 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_1714 IPR014748 Enoyl-CoA hydratase, C-terminal AMJAP_1714 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_1715 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMJAP_1715 IPR011527 ABC transporter type 1, transmembrane domain AMJAP_1715 IPR003593 AAA+ ATPase domain AMJAP_1715 IPR003439 ABC transporter-like AMJAP_1715 IPR017871 ABC transporter, conserved site AMJAP_1715 IPR011917 ABC transporter, lipid A export, MsbA AMJAP_1715 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1719 IPR015803 Cysteine-tRNA ligase AMJAP_1719 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMJAP_1719 IPR032678 tRNA synthetases class I, catalytic domain AMJAP_1719 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_1719 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase AMJAP_1719 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR AMJAP_1720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_1720 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal AMJAP_1720 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMJAP_1720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_1720 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMJAP_1720 IPR029061 Thiamin diphosphate-binding fold AMJAP_1720 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain AMJAP_1720 IPR011895 Pyruvate-flavodoxin oxidoreductase AMJAP_1720 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain AMJAP_1720 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AMJAP_1720 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain AMJAP_1722 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AMJAP_1722 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AMJAP_1722 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AMJAP_1722 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AMJAP_1722 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily AMJAP_1722 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain AMJAP_1722 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMJAP_1722 IPR004514 Glutamine-tRNA synthetase AMJAP_1722 IPR022861 Glutamine-tRNA ligase, bacterial AMJAP_1722 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_1723 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase AMJAP_1723 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AMJAP_1723 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AMJAP_1723 IPR029000 Cyclophilin-like domain superfamily AMJAP_1724 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMJAP_1724 IPR010138 UDP-2,3-diacylglucosamine hydrolase AMJAP_1725 IPR014347 Tautomerase/MIF superfamily AMJAP_1725 IPR037479 Tautomerase, MSAD family AMJAP_1728 IPR016181 Acyl-CoA N-acyltransferase AMJAP_1728 IPR000182 GNAT domain AMJAP_1729 IPR006153 Cation/H+ exchanger AMJAP_1729 IPR004771 K+/H+ exchanger AMJAP_1729 IPR038770 Sodium/solute symporter superfamily AMJAP_1729 IPR036291 NAD(P)-binding domain superfamily AMJAP_1729 IPR003148 Regulator of K+ conductance, N-terminal AMJAP_1731 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1731 IPR005119 LysR, substrate-binding AMJAP_1731 IPR000847 Transcription regulator HTH, LysR AMJAP_1731 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1732 IPR013149 Alcohol dehydrogenase, C-terminal AMJAP_1732 IPR013154 Alcohol dehydrogenase, N-terminal AMJAP_1732 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMJAP_1732 IPR020843 Polyketide synthase, enoylreductase domain AMJAP_1732 IPR036291 NAD(P)-binding domain superfamily AMJAP_1732 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 AMJAP_1732 IPR011032 GroES-like superfamily AMJAP_1735 IPR012709 2-methyl-aconitate isomerase PrpF AMJAP_1735 IPR007400 PrpF protein AMJAP_1736 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AMJAP_1736 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AMJAP_1736 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AMJAP_1736 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMJAP_1736 IPR006249 Aconitase/Iron-responsive element-binding protein 2 AMJAP_1736 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent AMJAP_1736 IPR036008 Aconitase, iron-sulfur domain AMJAP_1737 IPR016143 Citrate synthase-like, small alpha subdomain AMJAP_1737 IPR036969 Citrate synthase superfamily AMJAP_1737 IPR002020 Citrate synthase AMJAP_1737 IPR016142 Citrate synthase-like, large alpha subdomain AMJAP_1737 IPR011278 2-methylcitrate synthase/citrate synthase type I AMJAP_1737 IPR024176 Citrate synthase, bacterial-type AMJAP_1737 IPR019810 Citrate synthase active site AMJAP_1738 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site AMJAP_1738 IPR039556 ICL/PEPM domain AMJAP_1738 IPR012695 2-methylisocitrate lyase AMJAP_1738 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMJAP_1738 IPR040442 Pyruvate kinase-like domain superfamily AMJAP_1739 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1739 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1739 IPR011711 GntR, C-terminal AMJAP_1739 IPR008920 Transcription regulator FadR/GntR, C-terminal AMJAP_1739 IPR000485 AsnC-type HTH domain AMJAP_1739 IPR000524 Transcription regulator HTH, GntR AMJAP_1741 IPR015890 Chorismate-utilising enzyme, C-terminal AMJAP_1741 IPR006805 Anthranilate synthase component I, N-terminal AMJAP_1741 IPR019999 Anthranilate synthase component I-like AMJAP_1741 IPR005801 ADC synthase AMJAP_1741 IPR005802 Aminodeoxychorismate synthase, component I AMJAP_1745 IPR005636 DTW AMJAP_1745 IPR039262 DTW domain-containing protein 2 AMJAP_1746 IPR035919 EAL domain superfamily AMJAP_1746 IPR000253 Forkhead-associated (FHA) domain AMJAP_1746 IPR000160 GGDEF domain AMJAP_1746 IPR029787 Nucleotide cyclase AMJAP_1746 IPR008984 SMAD/FHA domain superfamily AMJAP_1746 IPR001633 EAL domain AMJAP_1748 IPR011606 Branched-chain amino acid transport, permease AMJAP_1750 IPR011863 Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein AMJAP_1750 IPR036412 HAD-like superfamily AMJAP_1750 IPR023214 HAD superfamily AMJAP_1752 IPR004734 Multidrug resistance protein AMJAP_1752 IPR036259 MFS transporter superfamily AMJAP_1752 IPR020846 Major facilitator superfamily domain AMJAP_1752 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AMJAP_1752 IPR011701 Major facilitator superfamily AMJAP_1754 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain AMJAP_1754 IPR005119 LysR, substrate-binding AMJAP_1754 IPR000847 Transcription regulator HTH, LysR AMJAP_1754 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1754 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1755 IPR012792 3-oxoacid CoA-transferase, subunit A AMJAP_1755 IPR004165 Coenzyme A transferase family I AMJAP_1755 IPR004163 Coenzyme A transferase binding site AMJAP_1755 IPR037171 NagB/RpiA transferase-like AMJAP_1756 IPR004165 Coenzyme A transferase family I AMJAP_1756 IPR012791 3-oxoacid CoA-transferase, subunit B AMJAP_1756 IPR004164 Coenzyme A transferase active site AMJAP_1756 IPR037171 NagB/RpiA transferase-like AMJAP_1757 IPR028081 Leucine-binding protein domain AMJAP_1757 IPR000709 Leu/Ile/Val-binding protein AMJAP_1757 IPR028082 Periplasmic binding protein-like I AMJAP_1758 IPR000160 GGDEF domain AMJAP_1758 IPR029787 Nucleotide cyclase AMJAP_1758 IPR033416 Periplasmic sensor domain CHASE7 AMJAP_1760 IPR003834 Cytochrome C biogenesis protein, transmembrane domain AMJAP_1760 IPR035671 DsbD gamma AMJAP_1760 IPR022910 Thiol:disulphide interchange protein DsbD AMJAP_1760 IPR036249 Thioredoxin-like superfamily AMJAP_1760 IPR017937 Thioredoxin, conserved site AMJAP_1760 IPR013766 Thioredoxin domain AMJAP_1760 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily AMJAP_1760 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AMJAP_1761 IPR006218 DAHP synthetase I/KDSA AMJAP_1761 IPR013785 Aldolase-type TIM barrel AMJAP_1761 IPR006219 DHAP synthase, class 1 AMJAP_1762 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric AMJAP_1763 IPR023753 FAD/NAD(P)-binding domain AMJAP_1763 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1765 IPR004090 Chemotaxis methyl-accepting receptor AMJAP_1765 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_1765 IPR001610 PAC motif AMJAP_1765 IPR000014 PAS domain AMJAP_1765 IPR003660 HAMP domain AMJAP_1765 IPR013655 PAS fold-3 AMJAP_1765 IPR035965 PAS domain superfamily AMJAP_1771 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AMJAP_1771 IPR004406 Aconitase B AMJAP_1771 IPR015933 Aconitase B, HEAT-like domain AMJAP_1771 IPR036288 Aconitase B, HEAT-like domain superfamily AMJAP_1771 IPR015929 Aconitase B, swivel AMJAP_1771 IPR036008 Aconitase, iron-sulfur domain AMJAP_1771 IPR015932 Aconitase, domain 2 AMJAP_1771 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMJAP_1771 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AMJAP_1771 IPR018136 Aconitase family, 4Fe-4S cluster binding site AMJAP_1772 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AMJAP_1772 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AMJAP_1772 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AMJAP_1772 IPR036008 Aconitase, iron-sulfur domain AMJAP_1772 IPR006249 Aconitase/Iron-responsive element-binding protein 2 AMJAP_1772 IPR018136 Aconitase family, 4Fe-4S cluster binding site AMJAP_1772 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMJAP_1774 IPR001633 EAL domain AMJAP_1774 IPR035919 EAL domain superfamily AMJAP_1774 IPR013655 PAS fold-3 AMJAP_1774 IPR000160 GGDEF domain AMJAP_1774 IPR013656 PAS fold-4 AMJAP_1774 IPR007895 MASE1 AMJAP_1774 IPR029787 Nucleotide cyclase AMJAP_1774 IPR001610 PAC motif AMJAP_1774 IPR000014 PAS domain AMJAP_1774 IPR000700 PAS-associated, C-terminal AMJAP_1774 IPR035965 PAS domain superfamily AMJAP_1775 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMJAP_1775 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain AMJAP_1775 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMJAP_1775 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMJAP_1776 IPR018062 HTH domain AraC-type, conserved site AMJAP_1776 IPR003313 AraC-type arabinose-binding/dimerisation domain AMJAP_1776 IPR009057 Homeobox-like domain superfamily AMJAP_1776 IPR037923 Transcription regulator HTH-like AMJAP_1776 IPR018060 DNA binding HTH domain, AraC-type AMJAP_1777 IPR012349 FMN-binding split barrel AMJAP_1777 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1777 IPR002563 Flavin reductase like domain AMJAP_1777 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1779 IPR002068 Alpha crystallin/Hsp20 domain AMJAP_1779 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain AMJAP_1779 IPR008978 HSP20-like chaperone AMJAP_1779 IPR023728 Small heat shock protein IbpA AMJAP_1780 IPR002589 Macro domain AMJAP_1782 IPR002737 MEMO1 family AMJAP_1784 IPR018517 tRNA-dihydrouridine synthase, conserved site AMJAP_1784 IPR032886 tRNA-dihydrouridine(16) synthase AMJAP_1784 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal AMJAP_1784 IPR001269 tRNA-dihydrouridine synthase AMJAP_1784 IPR013785 Aldolase-type TIM barrel AMJAP_1784 IPR035587 DUS-like, FMN-binding domain AMJAP_1785 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme AMJAP_1785 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_1785 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_1785 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_1785 IPR006234 O-succinylhomoserine sulfhydrylase AMJAP_1786 IPR029057 Phosphoribosyltransferase-like AMJAP_1786 IPR000836 Phosphoribosyltransferase domain AMJAP_1786 IPR029055 Nucleophile aminohydrolases, N-terminal AMJAP_1786 IPR017932 Glutamine amidotransferase type 2 domain AMJAP_1786 IPR035584 Amidophosphoribosyltransferase, N-terminal AMJAP_1786 IPR005854 Amidophosphoribosyltransferase AMJAP_1787 IPR003825 Colicin V production, CvpA AMJAP_1789 IPR036615 Mur ligase, C-terminal domain superfamily AMJAP_1789 IPR001645 Folylpolyglutamate synthetase AMJAP_1789 IPR036565 Mur-like, catalytic domain superfamily AMJAP_1789 IPR018109 Folylpolyglutamate synthetase, conserved site AMJAP_1789 IPR013221 Mur ligase, central AMJAP_1790 IPR034733 Acetyl-CoA carboxylase AMJAP_1790 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit AMJAP_1790 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_1790 IPR041010 Acetyl-coA carboxylase zinc finger domain AMJAP_1790 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AMJAP_1791 IPR013785 Aldolase-type TIM barrel AMJAP_1791 IPR002028 Tryptophan synthase, alpha chain AMJAP_1791 IPR011060 Ribulose-phosphate binding barrel AMJAP_1791 IPR018204 Tryptophan synthase, alpha chain, active site AMJAP_1792 IPR006654 Tryptophan synthase, beta chain AMJAP_1792 IPR023026 Tryptophan synthase beta chain/beta chain-like AMJAP_1792 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMJAP_1792 IPR006653 Tryptophan synthase, beta chain, conserved site AMJAP_1792 IPR001926 Pyridoxal-phosphate dependent enzyme AMJAP_1793 IPR013785 Aldolase-type TIM barrel AMJAP_1793 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) AMJAP_1793 IPR011060 Ribulose-phosphate binding barrel AMJAP_1794 IPR001406 Pseudouridine synthase I, TruA AMJAP_1794 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain AMJAP_1794 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_1794 IPR020095 Pseudouridine synthase I, TruA, C-terminal AMJAP_1795 IPR018392 LysM domain AMJAP_1795 IPR038440 FimV, C-terminal domain superfamily AMJAP_1795 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_1795 IPR020012 Motility protein FimV, N-terminal AMJAP_1795 IPR020011 Motility protein FimV, C-terminal AMJAP_1795 IPR036779 LysM domain superfamily AMJAP_1795 IPR038440 FimV, C-terminal domain superfamily AMJAP_1795 IPR036779 LysM domain superfamily AMJAP_1795 IPR018392 LysM domain AMJAP_1795 IPR020011 Motility protein FimV, C-terminal AMJAP_1795 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_1795 IPR020012 Motility protein FimV, N-terminal AMJAP_1796 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type AMJAP_1796 IPR012080 Aspartate-semialdehyde dehydrogenase AMJAP_1796 IPR036291 NAD(P)-binding domain superfamily AMJAP_1796 IPR000534 Semialdehyde dehydrogenase, NAD-binding AMJAP_1796 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AMJAP_1796 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site AMJAP_1797 IPR004429 Isopropylmalate dehydrogenase AMJAP_1797 IPR024084 Isopropylmalate dehydrogenase-like domain AMJAP_1797 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site AMJAP_1798 IPR004431 3-isopropylmalate dehydratase, small subunit AMJAP_1798 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMJAP_1798 IPR033940 3-isopropylmalate dehydratase, swivel domain AMJAP_1798 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain AMJAP_1799 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 AMJAP_1799 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain AMJAP_1799 IPR036008 Aconitase, iron-sulfur domain AMJAP_1799 IPR018136 Aconitase family, 4Fe-4S cluster binding site AMJAP_1799 IPR004430 3-isopropylmalate dehydratase, large subunit AMJAP_1799 IPR033941 3-Isopropylmalate dehydratase, catalytic domain AMJAP_1800 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1800 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1800 IPR000847 Transcription regulator HTH, LysR AMJAP_1802 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_1802 IPR029058 Alpha/Beta hydrolase fold AMJAP_1802 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit AMJAP_1803 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic AMJAP_1803 IPR009165 S-adenosylmethionine decarboxylase, bacterial AMJAP_1803 IPR016067 S-adenosylmethionine decarboxylase, core AMJAP_1809 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR AMJAP_1809 IPR012909 PHA accumulation regulator DNA-binding, N-terminal AMJAP_1809 IPR007897 PHB accumulation regulatory AMJAP_1811 IPR036259 MFS transporter superfamily AMJAP_1811 IPR024989 Major facilitator superfamily associated domain AMJAP_1811 IPR026032 Probable 3-phenylpropionic acid transporter AMJAP_1812 IPR030374 Polyamine biosynthesis domain AMJAP_1812 IPR037163 Spermidine synthase, tetramerisation domain superfamily AMJAP_1812 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1812 IPR001045 Spermidine/spermine synthases AMJAP_1812 IPR035246 Spermidine synthase, tetramerisation domain AMJAP_1812 IPR030373 Polyamine biosynthesis domain, conserved site AMJAP_1813 IPR000453 Chorismate synthase AMJAP_1813 IPR020541 Chorismate synthase, conserved site AMJAP_1813 IPR035904 Chorismate synthase AroC superfamily AMJAP_1814 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMJAP_1814 IPR007848 Methyltransferase small domain AMJAP_1814 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1814 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase AMJAP_1814 IPR004556 Methyltransferase HemK-like AMJAP_1816 IPR020602 GTP cyclohydrolase I domain AMJAP_1816 IPR018234 GTP cyclohydrolase I, conserved site AMJAP_1816 IPR001474 GTP cyclohydrolase I AMJAP_1817 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMJAP_1817 IPR001423 Lysophospholipase patatin, conserved site AMJAP_1817 IPR002641 Patatin-like phospholipase domain AMJAP_1822 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_1822 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMJAP_1822 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent AMJAP_1822 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal AMJAP_1822 IPR036291 NAD(P)-binding domain superfamily AMJAP_1822 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal AMJAP_1823 IPR003846 Protein adenylyltransferase SelO AMJAP_1824 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1824 IPR011545 DEAD/DEAH box helicase domain AMJAP_1824 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_1824 IPR023554 ATP-dependent RNA helicase RhlB type AMJAP_1824 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMJAP_1824 IPR014014 RNA helicase, DEAD-box type, Q motif AMJAP_1824 IPR001650 Helicase, C-terminal AMJAP_1825 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1825 IPR006555 ATP-dependent helicase, C-terminal AMJAP_1825 IPR010614 DEAD2 AMJAP_1825 IPR039000 ATP-dependent DNA helicase DinG AMJAP_1825 IPR001650 Helicase, C-terminal AMJAP_1825 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type AMJAP_1826 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1826 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1826 IPR015927 Peptidase S24/S26A/S26B/S26C AMJAP_1826 IPR006197 Peptidase S24, LexA-like AMJAP_1826 IPR006199 LexA repressor, DNA-binding domain AMJAP_1826 IPR036286 LexA/Signal peptidase-like superfamily AMJAP_1826 IPR006200 Transcription regulator LexA AMJAP_1826 IPR039418 LexA-like AMJAP_1827 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1827 IPR004596 Cell division suppressor protein, SulA AMJAP_1830 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMJAP_1830 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMJAP_1830 IPR013498 DNA topoisomerase, type IA, zn finger AMJAP_1830 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type AMJAP_1830 IPR028612 DNA topoisomerase I, type IA AMJAP_1830 IPR006171 TOPRIM domain AMJAP_1830 IPR013497 DNA topoisomerase, type IA, central AMJAP_1830 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AMJAP_1830 IPR005733 DNA topoisomerase I, bacterial-type AMJAP_1830 IPR023405 DNA topoisomerase, type IA, core domain AMJAP_1830 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AMJAP_1830 IPR034149 DNA topoisomerase 1, TOPRIM domain AMJAP_1830 IPR003601 DNA topoisomerase, type IA, domain 2 AMJAP_1830 IPR023406 DNA topoisomerase, type IA, active site AMJAP_1830 IPR000380 DNA topoisomerase, type IA AMJAP_1834 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_1834 IPR006016 UspA AMJAP_1834 IPR006015 Universal stress protein A family AMJAP_1835 IPR003593 AAA+ ATPase domain AMJAP_1835 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily AMJAP_1835 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1835 IPR017871 ABC transporter, conserved site AMJAP_1835 IPR003439 ABC transporter-like AMJAP_1835 IPR032524 ABC transporter Uup, C-terminal AMJAP_1835 IPR032781 ABC-transporter extension domain AMJAP_1836 IPR000189 Prokaryotic transglycosylase, active site AMJAP_1836 IPR008939 Lytic transglycosylase, superhelical U-shaped AMJAP_1836 IPR012289 Lytic transglycosylase, superhelical linker AMJAP_1836 IPR023346 Lysozyme-like domain superfamily AMJAP_1836 IPR008258 Transglycosylase SLT domain 1 AMJAP_1836 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily AMJAP_1837 IPR018228 Deoxyribonuclease, TatD-related, conserved site AMJAP_1837 IPR024918 3'-5' ssDNA/RNA exonuclease TatD AMJAP_1837 IPR032466 Metal-dependent hydrolase AMJAP_1837 IPR001130 TatD family AMJAP_1839 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I AMJAP_1839 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain AMJAP_1839 IPR029058 Alpha/Beta hydrolase fold AMJAP_1840 IPR002528 Multi antimicrobial extrusion protein AMJAP_1840 IPR022913 Multidrug resistance protein MdtK AMJAP_1843 IPR013702 FIST domain, N-terminal AMJAP_1843 IPR019494 FIST, C-domain AMJAP_1843 IPR001633 EAL domain AMJAP_1843 IPR000160 GGDEF domain AMJAP_1843 IPR035919 EAL domain superfamily AMJAP_1843 IPR029787 Nucleotide cyclase AMJAP_1845 IPR022931 Sulfur carrier protein TusA AMJAP_1845 IPR001455 TusA-like domain AMJAP_1845 IPR036868 TusA-like domain superfamily AMJAP_1847 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1847 IPR040739 RlmM ferredoxin-like domain AMJAP_1847 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AMJAP_1847 IPR011224 Ribosomal RNA large subunit methyltransferase M AMJAP_1849 IPR023616 Cytochrome c oxidase-like, subunit I domain AMJAP_1849 IPR004677 Cytochrome c oxidase cbb3-type, subunit I AMJAP_1849 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AMJAP_1849 IPR000883 Cytochrome c oxidase subunit I AMJAP_1849 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AMJAP_1852 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal AMJAP_1852 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily AMJAP_1852 IPR009056 Cytochrome c-like domain AMJAP_1852 IPR008168 Cytochrome c, class IC AMJAP_1852 IPR004678 Cytochrome c oxidase cbb3-type, subunit III AMJAP_1852 IPR036909 Cytochrome c-like domain superfamily AMJAP_1853 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_1853 IPR032879 FixG, C-terminal immunoglobulin-like domain AMJAP_1853 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_1853 IPR013783 Immunoglobulin-like fold AMJAP_1853 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG AMJAP_1855 IPR036412 HAD-like superfamily AMJAP_1855 IPR008250 P-type ATPase, A domain superfamily AMJAP_1855 IPR018303 P-type ATPase, phosphorylation site AMJAP_1855 IPR023214 HAD superfamily AMJAP_1855 IPR017969 Heavy-metal-associated, conserved site AMJAP_1855 IPR023298 P-type ATPase, transmembrane domain superfamily AMJAP_1855 IPR006122 Heavy metal-associated domain, copper ion-binding AMJAP_1855 IPR023299 P-type ATPase, cytoplasmic domain N AMJAP_1855 IPR006121 Heavy metal-associated domain, HMA AMJAP_1855 IPR001757 P-type ATPase AMJAP_1855 IPR027256 P-type ATPase, subfamily IB AMJAP_1855 IPR036163 Heavy metal-associated domain superfamily AMJAP_1858 IPR023404 Radical SAM, alpha/beta horseshoe AMJAP_1858 IPR007197 Radical SAM AMJAP_1858 IPR034505 Anaerobic coproporphyrinogen-III oxidase AMJAP_1858 IPR006638 Elp3/MiaB/NifB AMJAP_1858 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN AMJAP_1858 IPR010723 HemN, C-terminal AMJAP_1859 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1859 IPR018335 Transcription regulator HTH, Crp-type, conserved site AMJAP_1859 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1859 IPR018490 Cyclic nucleotide-binding-like AMJAP_1859 IPR014710 RmlC-like jelly roll fold AMJAP_1859 IPR000595 Cyclic nucleotide-binding domain AMJAP_1859 IPR012318 Crp-type HTH domain AMJAP_1860 IPR005764 Adenine phosphoribosyl transferase AMJAP_1860 IPR000836 Phosphoribosyltransferase domain AMJAP_1860 IPR029057 Phosphoribosyltransferase-like AMJAP_1863 IPR007476 Putative exonuclease, RdgC AMJAP_1865 IPR007197 Radical SAM AMJAP_1865 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type AMJAP_1865 IPR013785 Aldolase-type TIM barrel AMJAP_1865 IPR024924 7-carboxy-7-deazaguanine synthase-like AMJAP_1866 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 AMJAP_1866 IPR038770 Sodium/solute symporter superfamily AMJAP_1866 IPR004710 Bile acid:sodium symporter AMJAP_1867 IPR002524 Cation efflux protein AMJAP_1867 IPR027470 Cation efflux protein, cytoplasmic domain AMJAP_1867 IPR036837 Cation efflux protein, cytoplasmic domain superfamily AMJAP_1867 IPR027469 Cation efflux transmembrane domain superfamily AMJAP_1868 IPR015796 Impact family, bacterial/archaeal AMJAP_1868 IPR023582 Impact family AMJAP_1868 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site AMJAP_1868 IPR035647 EF-G domain III/V-like AMJAP_1868 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal AMJAP_1868 IPR001498 Impact, N-terminal AMJAP_1868 IPR036956 Impact, N-terminal domain superfamily AMJAP_1868 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_1869 IPR011547 SLC26A/SulP transporter domain AMJAP_1869 IPR002645 STAS domain AMJAP_1869 IPR001902 SLC26A/SulP transporter AMJAP_1869 IPR036513 STAS domain superfamily AMJAP_1870 IPR029787 Nucleotide cyclase AMJAP_1870 IPR000160 GGDEF domain AMJAP_1871 IPR023753 FAD/NAD(P)-binding domain AMJAP_1871 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMJAP_1871 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_1871 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site AMJAP_1871 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AMJAP_1871 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I AMJAP_1872 IPR037493 Exodeoxyribonuclease III-like AMJAP_1872 IPR005135 Endonuclease/exonuclease/phosphatase AMJAP_1872 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMJAP_1872 IPR004808 AP endonuclease 1 AMJAP_1872 IPR020848 AP endonuclease 1, conserved site AMJAP_1872 IPR020847 AP endonuclease 1, binding site AMJAP_1874 IPR021309 Protein of unknown function DUF2892 AMJAP_1874 IPR001763 Rhodanese-like domain AMJAP_1874 IPR036873 Rhodanese-like domain superfamily AMJAP_1875 IPR011006 CheY-like superfamily AMJAP_1875 IPR001789 Signal transduction response regulator, receiver domain AMJAP_1875 IPR029787 Nucleotide cyclase AMJAP_1875 IPR000160 GGDEF domain AMJAP_1880 IPR011991 ArsR-like helix-turn-helix domain AMJAP_1880 IPR001845 HTH ArsR-type DNA-binding domain AMJAP_1880 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1880 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1881 IPR016102 Succinyl-CoA synthetase-like AMJAP_1881 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AMJAP_1881 IPR003781 CoA-binding AMJAP_1881 IPR000182 GNAT domain AMJAP_1881 IPR016181 Acyl-CoA N-acyltransferase AMJAP_1881 IPR011761 ATP-grasp fold AMJAP_1881 IPR036291 NAD(P)-binding domain superfamily AMJAP_1881 IPR013815 ATP-grasp fold, subdomain 1 AMJAP_1886 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AMJAP_1886 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain AMJAP_1886 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMJAP_1886 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain AMJAP_1886 IPR020921 Erythronate-4-phosphate dehydrogenase AMJAP_1886 IPR038251 PdxB, dimerisation domain superfamily AMJAP_1886 IPR036291 NAD(P)-binding domain superfamily AMJAP_1888 IPR023026 Tryptophan synthase beta chain/beta chain-like AMJAP_1888 IPR006654 Tryptophan synthase, beta chain AMJAP_1888 IPR006653 Tryptophan synthase, beta chain, conserved site AMJAP_1888 IPR001926 Pyridoxal-phosphate dependent enzyme AMJAP_1888 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMJAP_1894 IPR023405 DNA topoisomerase, type IA, core domain AMJAP_1894 IPR003602 DNA topoisomerase, type IA, DNA-binding domain AMJAP_1894 IPR005738 DNA topoisomerase III AMJAP_1894 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMJAP_1894 IPR034144 DNA topoisomerase 3-like, TOPRIM domain AMJAP_1894 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AMJAP_1894 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMJAP_1894 IPR013497 DNA topoisomerase, type IA, central AMJAP_1894 IPR023406 DNA topoisomerase, type IA, active site AMJAP_1894 IPR003601 DNA topoisomerase, type IA, domain 2 AMJAP_1894 IPR000380 DNA topoisomerase, type IA AMJAP_1894 IPR006171 TOPRIM domain AMJAP_1898 IPR036249 Thioredoxin-like superfamily AMJAP_1898 IPR011902 Glutaredoxin, GrxA AMJAP_1898 IPR014025 Glutaredoxin subgroup AMJAP_1898 IPR002109 Glutaredoxin AMJAP_1898 IPR011767 Glutaredoxin active site AMJAP_1899 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain AMJAP_1899 IPR003593 AAA+ ATPase domain AMJAP_1899 IPR027785 UvrD-like helicase C-terminal domain AMJAP_1899 IPR006344 RecBCD enzyme subunit RecD AMJAP_1899 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1900 IPR034739 UvrD/AddA helicase, N-terminal AMJAP_1900 IPR014016 UvrD-like helicase, ATP-binding domain AMJAP_1900 IPR011335 Restriction endonuclease type II-like AMJAP_1900 IPR004586 RecBCD enzyme subunit RecB AMJAP_1900 IPR011604 Exonuclease, phage-type/RecB, C-terminal AMJAP_1900 IPR000212 DNA helicase, UvrD/REP type AMJAP_1900 IPR014017 UvrD-like DNA helicase, C-terminal AMJAP_1900 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AMJAP_1900 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1901 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1901 IPR013986 DExx box DNA helicase domain superfamily AMJAP_1901 IPR041500 RecC, C-terminal AMJAP_1901 IPR011335 Restriction endonuclease type II-like AMJAP_1901 IPR006697 RecBCD enzyme subunit RecC AMJAP_1903 IPR020846 Major facilitator superfamily domain AMJAP_1903 IPR011701 Major facilitator superfamily AMJAP_1903 IPR036259 MFS transporter superfamily AMJAP_1906 IPR029069 HotDog domain superfamily AMJAP_1906 IPR002539 MaoC-like dehydratase domain AMJAP_1907 IPR003473 Quinolinate synthetase A AMJAP_1907 IPR023513 Quinolinate synthase A, type 1 AMJAP_1907 IPR036094 Quinolinate synthetase A superfamily AMJAP_1908 IPR018317 Queuosine biosynthesis protein QueC AMJAP_1908 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_1910 IPR006664 Outer membrane protein, bacterial AMJAP_1910 IPR006665 OmpA-like domain AMJAP_1910 IPR006690 Outer membrane protein, OmpA-like, conserved site AMJAP_1910 IPR036737 OmpA-like domain superfamily AMJAP_1910 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal AMJAP_1910 IPR039001 Peptidoglycan-associated lipoprotein AMJAP_1911 IPR011042 Six-bladed beta-propeller, TolB-like AMJAP_1911 IPR014167 Tol-Pal system protein TolB AMJAP_1911 IPR036752 TolB, N-terminal domain superfamily AMJAP_1911 IPR007195 TolB, N-terminal AMJAP_1911 IPR011659 WD40-like Beta Propeller AMJAP_1912 IPR014161 Tol-Pal system, TolA AMJAP_1912 IPR006260 TonB/TolA, C-terminal AMJAP_1913 IPR003400 Biopolymer transport protein ExbD/TolR AMJAP_1913 IPR014168 Tol-Pal system protein TolR AMJAP_1914 IPR014163 Tol-Pal system, TolQ AMJAP_1914 IPR002898 MotA/TolQ/ExbB proton channel AMJAP_1916 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1916 IPR041445 RuvB, AAA lid domain AMJAP_1916 IPR008823 RuvB C-terminal winged helix domain AMJAP_1916 IPR008824 RuvB-like P-loop domain AMJAP_1916 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_1916 IPR004605 DNA helicase, Holliday junction RuvB-type AMJAP_1916 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1916 IPR003593 AAA+ ATPase domain AMJAP_1917 IPR012340 Nucleic acid-binding, OB-fold AMJAP_1917 IPR036267 RuvA, C-terminal domain superfamily AMJAP_1917 IPR011114 Holliday junction DNA helicase RuvA, C-terminal AMJAP_1917 IPR010994 RuvA domain 2-like AMJAP_1917 IPR000085 Bacterial DNA recombination protein RuvA AMJAP_1917 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 AMJAP_1917 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial AMJAP_1918 IPR005115 Uncharacterised domain UPF0126 AMJAP_1919 IPR036397 Ribonuclease H superfamily AMJAP_1919 IPR012337 Ribonuclease H-like superfamily AMJAP_1919 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site AMJAP_1919 IPR002176 Crossover junction endodeoxyribonuclease RuvC AMJAP_1920 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb AMJAP_1920 IPR006195 Aminoacyl-tRNA synthetase, class II AMJAP_1920 IPR012340 Nucleic acid-binding, OB-fold AMJAP_1920 IPR004115 GAD-like domain superfamily AMJAP_1920 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMJAP_1920 IPR029351 GAD domain AMJAP_1920 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMJAP_1920 IPR004524 Aspartate-tRNA ligase, type 1 AMJAP_1926 IPR029787 Nucleotide cyclase AMJAP_1926 IPR000160 GGDEF domain AMJAP_1931 IPR042097 Aminopeptidase N-like , N-terminal AMJAP_1931 IPR027268 Peptidase M4/M1, CTD superfamily AMJAP_1931 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily AMJAP_1931 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal AMJAP_1931 IPR012779 Peptidase M1, alanyl aminopeptidase AMJAP_1931 IPR014782 Peptidase M1, membrane alanine aminopeptidase AMJAP_1931 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase AMJAP_1931 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold AMJAP_1931 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily AMJAP_1933 IPR009749 Protein of unknown function DUF1315 AMJAP_1934 IPR022732 Peptidase S54, GlpG peptidase, N-terminal AMJAP_1934 IPR035952 Rhomboid-like superfamily AMJAP_1934 IPR023662 Rhomboid protease GlpG AMJAP_1934 IPR038236 GlpG peptidase, N-terminal domain superfamily AMJAP_1934 IPR022764 Peptidase S54, rhomboid domain AMJAP_1935 IPR041780 PrpE-like, metallophosphatase domain AMJAP_1935 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase AMJAP_1935 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE AMJAP_1935 IPR029052 Metallo-dependent phosphatase-like AMJAP_1935 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMJAP_1936 IPR002504 NAD kinase AMJAP_1936 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AMJAP_1936 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal AMJAP_1936 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal AMJAP_1938 IPR000160 GGDEF domain AMJAP_1938 IPR029787 Nucleotide cyclase AMJAP_1939 IPR038228 Syd superfamily AMJAP_1939 IPR009948 Syd AMJAP_1942 IPR002579 Peptide methionine sulphoxide reductase MrsB AMJAP_1942 IPR028427 Peptide methionine sulfoxide reductase AMJAP_1942 IPR011057 Mss4-like superfamily AMJAP_1943 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_1943 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_1943 IPR004839 Aminotransferase, class I/classII AMJAP_1943 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_1945 IPR013976 Metal-dependent hydrolase HDOD AMJAP_1947 IPR002478 PUA domain AMJAP_1947 IPR015947 PUA-like superfamily AMJAP_1947 IPR036974 PUA domain superfamily AMJAP_1947 IPR041532 RlmI, PUA-like domain AMJAP_1947 IPR023542 rRNA large subunit methyltransferase I AMJAP_1947 IPR019614 S-adenosylmethionine-dependent methyltransferase AMJAP_1947 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1948 IPR022919 Peptidase M48, protease HtpX, putative AMJAP_1948 IPR001915 Peptidase M48 AMJAP_1949 IPR024560 Uncharacterised protein family UPF0313, C-terminal AMJAP_1949 IPR006638 Elp3/MiaB/NifB AMJAP_1949 IPR020612 Methylthiotransferase, conserved site AMJAP_1949 IPR007197 Radical SAM AMJAP_1949 IPR023404 Radical SAM, alpha/beta horseshoe AMJAP_1949 IPR013704 Uncharacterised protein family UPF0313, N-terminal AMJAP_1949 IPR022946 Uncharacterised protein family UPF0313 AMJAP_1953 IPR009822 YaeQ AMJAP_1953 IPR011335 Restriction endonuclease type II-like AMJAP_1953 IPR038590 YaeQ superfamily AMJAP_1954 IPR005358 Putative zinc- or iron-chelating domain containing protein AMJAP_1959 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_1959 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_1959 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_1959 IPR005861 Histidinol-phosphate aminotransferase family AMJAP_1959 IPR004839 Aminotransferase, class I/classII AMJAP_1959 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site AMJAP_1961 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1961 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1961 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain AMJAP_1961 IPR005119 LysR, substrate-binding AMJAP_1961 IPR000847 Transcription regulator HTH, LysR AMJAP_1966 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal AMJAP_1966 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMJAP_1966 IPR002986 Diaminopimelate decarboxylase, LysA AMJAP_1966 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site AMJAP_1966 IPR000183 Ornithine/DAP/Arg decarboxylase AMJAP_1966 IPR029066 PLP-binding barrel AMJAP_1966 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal AMJAP_1968 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_1968 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1968 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1968 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_1968 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_1968 IPR004839 Aminotransferase, class I/classII AMJAP_1968 IPR000524 Transcription regulator HTH, GntR AMJAP_1969 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1969 IPR016909 Ribosomal RNA large subunit methyltransferase F AMJAP_1969 IPR010286 METTL16/RlmF family AMJAP_1972 IPR000835 MarR-type HTH domain AMJAP_1972 IPR023187 Transcriptional regulator MarR-type, conserved site AMJAP_1972 IPR012712 HTH-type transcriptional regulator HpaR/FarR AMJAP_1972 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_1972 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_1973 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase AMJAP_1973 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AMJAP_1974 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_1974 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_1974 IPR015590 Aldehyde dehydrogenase domain AMJAP_1974 IPR010102 Succinate semialdehyde dehydrogenase AMJAP_1974 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_1974 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_1974 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_1975 IPR004734 Multidrug resistance protein AMJAP_1975 IPR011701 Major facilitator superfamily AMJAP_1975 IPR036259 MFS transporter superfamily AMJAP_1975 IPR020846 Major facilitator superfamily domain AMJAP_1975 IPR004812 Drug resistance transporter Bcr/CmlA subfamily AMJAP_1978 IPR010696 Protein of unknown function DUF1272 AMJAP_1980 IPR011066 Mechanosensitive ion channel MscS, C-terminal AMJAP_1980 IPR006686 Mechanosensitive ion channel MscS, conserved site AMJAP_1980 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AMJAP_1980 IPR006685 Mechanosensitive ion channel MscS AMJAP_1980 IPR008910 Conserved TM helix AMJAP_1980 IPR010920 LSM domain superfamily AMJAP_1980 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMJAP_1983 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase AMJAP_1983 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_1983 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_1983 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_1983 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_1983 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_1983 IPR015590 Aldehyde dehydrogenase domain AMJAP_1984 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit AMJAP_1984 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMJAP_1984 IPR011234 Fumarylacetoacetase-like, C-terminal AMJAP_1984 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit AMJAP_1985 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit AMJAP_1985 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit AMJAP_1985 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMJAP_1985 IPR011234 Fumarylacetoacetase-like, C-terminal AMJAP_1986 IPR005000 HpcH/HpaI aldolase/citrate lyase domain AMJAP_1986 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales AMJAP_1986 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMJAP_1986 IPR040442 Pyruvate kinase-like domain superfamily AMJAP_1986 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase AMJAP_1987 IPR012690 2-oxo-hepta-4-ene-1,7-dioic acid hydratase AMJAP_1987 IPR011234 Fumarylacetoacetase-like, C-terminal AMJAP_1987 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMJAP_1989 IPR016181 Acyl-CoA N-acyltransferase AMJAP_1989 IPR000182 GNAT domain AMJAP_1992 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_1992 IPR020575 Heat shock protein Hsp90, N-terminal AMJAP_1992 IPR001404 Heat shock protein Hsp90 family AMJAP_1992 IPR019805 Heat shock protein Hsp90, conserved site AMJAP_1992 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_1992 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_1992 IPR037196 HSP90, C-terminal domain AMJAP_1996 IPR015947 PUA-like superfamily AMJAP_1996 IPR041532 RlmI, PUA-like domain AMJAP_1996 IPR036974 PUA domain superfamily AMJAP_1996 IPR019614 S-adenosylmethionine-dependent methyltransferase AMJAP_1996 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_1996 IPR023542 rRNA large subunit methyltransferase I AMJAP_1996 IPR002478 PUA domain AMJAP_2000 IPR006231 Malate:quinone-oxidoreductase AMJAP_2000 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2001 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_2001 IPR000727 Target SNARE coiled-coil homology domain AMJAP_2001 IPR003660 HAMP domain AMJAP_2001 IPR004090 Chemotaxis methyl-accepting receptor AMJAP_2001 IPR033480 Single Cache domain 2 AMJAP_2002 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative AMJAP_2002 IPR010758 Trans-2-enoyl-CoA reductase AMJAP_2002 IPR024906 Enoyl reductase FAD binding domain AMJAP_2003 IPR006638 Elp3/MiaB/NifB AMJAP_2003 IPR032432 Radical SAM, C-terminal extension AMJAP_2003 IPR007197 Radical SAM AMJAP_2003 IPR039661 ELP3/YhcC AMJAP_2003 IPR005911 Protein YhcC-like AMJAP_2003 IPR023404 Radical SAM, alpha/beta horseshoe AMJAP_2004 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AMJAP_2004 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ AMJAP_2004 IPR029069 HotDog domain superfamily AMJAP_2005 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain AMJAP_2005 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_2005 IPR020845 AMP-binding, conserved site AMJAP_2005 IPR000873 AMP-dependent synthetase/ligase AMJAP_2005 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_2006 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site AMJAP_2006 IPR011548 3-hydroxyisobutyrate dehydrogenase AMJAP_2006 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMJAP_2006 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_2006 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding AMJAP_2006 IPR036291 NAD(P)-binding domain superfamily AMJAP_2006 IPR015815 3-hydroxyisobutyrate dehydrogenase-related AMJAP_2006 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain AMJAP_2007 IPR014748 Enoyl-CoA hydratase, C-terminal AMJAP_2007 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_2007 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_2008 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_2008 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_2008 IPR014748 Enoyl-CoA hydratase, C-terminal AMJAP_2008 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMJAP_2009 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMJAP_2009 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMJAP_2009 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMJAP_2009 IPR006089 Acyl-CoA dehydrogenase, conserved site AMJAP_2009 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMJAP_2009 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMJAP_2009 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMJAP_2010 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_2010 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_2010 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_2010 IPR010061 Methylmalonate-semialdehyde dehydrogenase AMJAP_2010 IPR015590 Aldehyde dehydrogenase domain AMJAP_2010 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_2012 IPR029058 Alpha/Beta hydrolase fold AMJAP_2012 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I AMJAP_2012 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain AMJAP_2013 IPR009057 Homeobox-like domain superfamily AMJAP_2013 IPR018062 HTH domain AraC-type, conserved site AMJAP_2013 IPR018060 DNA binding HTH domain, AraC-type AMJAP_2013 IPR037923 Transcription regulator HTH-like AMJAP_2013 IPR003313 AraC-type arabinose-binding/dimerisation domain AMJAP_2013 IPR020449 Transcription regulator HTH, AraC- type AMJAP_2014 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMJAP_2014 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMJAP_2014 IPR037523 Vicinal oxygen chelate (VOC) domain AMJAP_2015 IPR019888 Transcription regulator AsnC-type AMJAP_2015 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2015 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2015 IPR011991 ArsR-like helix-turn-helix domain AMJAP_2015 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMJAP_2015 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMJAP_2015 IPR011008 Dimeric alpha-beta barrel AMJAP_2015 IPR000485 AsnC-type HTH domain AMJAP_2016 IPR002293 Amino acid/polyamine transporter I AMJAP_2019 IPR013785 Aldolase-type TIM barrel AMJAP_2019 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMJAP_2019 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2020 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMJAP_2020 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AMJAP_2020 IPR000962 Zinc finger, DksA/TraR C4-type AMJAP_2022 IPR005216 Citrate lyase ligase AMJAP_2022 IPR016181 Acyl-CoA N-acyltransferase AMJAP_2022 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2022 IPR004821 Cytidyltransferase-like domain AMJAP_2022 IPR013166 Citrate lyase ligase, C-terminal AMJAP_2022 IPR000182 GNAT domain AMJAP_2023 IPR020615 Thiolase, acyl-enzyme intermediate active site AMJAP_2023 IPR016039 Thiolase-like AMJAP_2023 IPR020610 Thiolase, active site AMJAP_2023 IPR020617 Thiolase, C-terminal AMJAP_2023 IPR020616 Thiolase, N-terminal AMJAP_2023 IPR020613 Thiolase, conserved site AMJAP_2023 IPR002155 Thiolase AMJAP_2025 IPR001851 ABC transporter, permease AMJAP_2027 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AMJAP_2027 IPR003593 AAA+ ATPase domain AMJAP_2027 IPR003439 ABC transporter-like AMJAP_2027 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2027 IPR017871 ABC transporter, conserved site AMJAP_2028 IPR003593 AAA+ ATPase domain AMJAP_2028 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMJAP_2028 IPR017871 ABC transporter, conserved site AMJAP_2028 IPR003439 ABC transporter-like AMJAP_2028 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2030 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMJAP_2030 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMJAP_2030 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMJAP_2030 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMJAP_2030 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMJAP_2030 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMJAP_2030 IPR006089 Acyl-CoA dehydrogenase, conserved site AMJAP_2031 IPR034733 Acetyl-CoA carboxylase AMJAP_2031 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_2031 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal AMJAP_2031 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal AMJAP_2032 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_2032 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMJAP_2032 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_2033 IPR001882 Biotin-binding site AMJAP_2033 IPR005481 Biotin carboxylase-like, N-terminal domain AMJAP_2033 IPR013815 ATP-grasp fold, subdomain 1 AMJAP_2033 IPR011761 ATP-grasp fold AMJAP_2033 IPR000089 Biotin/lipoyl attachment AMJAP_2033 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMJAP_2033 IPR041265 Propionyl-coenzyme A carboxylase, BT domain AMJAP_2033 IPR016185 Pre-ATP-grasp domain superfamily AMJAP_2033 IPR011054 Rudiment single hybrid motif AMJAP_2033 IPR011053 Single hybrid motif AMJAP_2033 IPR005482 Biotin carboxylase, C-terminal AMJAP_2033 IPR011764 Biotin carboxylation domain AMJAP_2034 IPR013785 Aldolase-type TIM barrel AMJAP_2034 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site AMJAP_2034 IPR000891 Pyruvate carboxyltransferase AMJAP_2036 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_2036 IPR020845 AMP-binding, conserved site AMJAP_2036 IPR000873 AMP-dependent synthetase/ligase AMJAP_2037 IPR023576 UbiE/COQ5 methyltransferase, conserved site AMJAP_2037 IPR004033 UbiE/COQ5 methyltransferase AMJAP_2037 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_2038 IPR001650 Helicase, C-terminal AMJAP_2038 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMJAP_2038 IPR014014 RNA helicase, DEAD-box type, Q motif AMJAP_2038 IPR028622 ATP-dependent RNA helicase RhlE AMJAP_2038 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_2038 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2038 IPR011545 DEAD/DEAH box helicase domain AMJAP_2039 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_2039 IPR013752 Ketopantoate reductase, C-terminal domain AMJAP_2039 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMJAP_2039 IPR003710 Ketopantoate reductase ApbA/PanE AMJAP_2039 IPR013332 Ketopantoate reductase, N-terminal domain AMJAP_2039 IPR036291 NAD(P)-binding domain superfamily AMJAP_2041 IPR002781 Transmembrane protein TauE-like AMJAP_2042 IPR011547 SLC26A/SulP transporter domain AMJAP_2042 IPR018045 Sulphate anion transporter, conserved site AMJAP_2042 IPR001902 SLC26A/SulP transporter AMJAP_2042 IPR002645 STAS domain AMJAP_2042 IPR036513 STAS domain superfamily AMJAP_2043 IPR016193 Cytidine deaminase-like AMJAP_2043 IPR002125 Cytidine and deoxycytidylate deaminase domain AMJAP_2043 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMJAP_2043 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal AMJAP_2043 IPR028883 tRNA-specific adenosine deaminase AMJAP_2043 IPR012094 tRNA(Ile)-lysidine synthase AMJAP_2043 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2043 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal AMJAP_2044 IPR036775 DNA polymerase, Y-family, little finger domain superfamily AMJAP_2044 IPR022880 DNA polymerase IV AMJAP_2044 IPR024728 DNA polymerase type-Y, HhH motif AMJAP_2044 IPR001126 UmuC domain AMJAP_2048 IPR001623 DnaJ domain AMJAP_2048 IPR012724 Chaperone DnaJ AMJAP_2048 IPR002939 Chaperone DnaJ, C-terminal AMJAP_2048 IPR008971 HSP40/DnaJ peptide-binding AMJAP_2048 IPR018253 DnaJ domain, conserved site AMJAP_2048 IPR001305 Heat shock protein DnaJ, cysteine-rich domain AMJAP_2048 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AMJAP_2048 IPR036869 Chaperone J-domain superfamily AMJAP_2050 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMJAP_2050 IPR011234 Fumarylacetoacetase-like, C-terminal AMJAP_2052 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_2052 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_2052 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_2052 IPR005467 Histidine kinase domain AMJAP_2052 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_2052 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_2054 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2054 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_2054 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2054 IPR011006 CheY-like superfamily AMJAP_2054 IPR003593 AAA+ ATPase domain AMJAP_2054 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_2054 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_2054 IPR009057 Homeobox-like domain superfamily AMJAP_2054 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_2055 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily AMJAP_2055 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMJAP_2055 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain AMJAP_2058 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2058 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2058 IPR005119 LysR, substrate-binding AMJAP_2058 IPR000847 Transcription regulator HTH, LysR AMJAP_2059 IPR034341 Stringent starvation protein A, N-terminal AMJAP_2059 IPR040079 Glutathione Transferase family AMJAP_2059 IPR004046 Glutathione S-transferase, C-terminal AMJAP_2059 IPR036249 Thioredoxin-like superfamily AMJAP_2059 IPR004045 Glutathione S-transferase, N-terminal AMJAP_2059 IPR010987 Glutathione S-transferase, C-terminal-like AMJAP_2059 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMJAP_2060 IPR024530 Putative quorum-sensing-regulated virulence factor AMJAP_2062 IPR032672 TmcA/NAT10/Kre33 AMJAP_2062 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2062 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal AMJAP_2062 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain AMJAP_2062 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA AMJAP_2062 IPR007807 Helicase domain AMJAP_2062 IPR000182 GNAT domain AMJAP_2062 IPR038321 TmcA, C-terminal domain superfamily AMJAP_2062 IPR016181 Acyl-CoA N-acyltransferase AMJAP_2063 IPR018484 Carbohydrate kinase, FGGY, N-terminal AMJAP_2063 IPR005999 Glycerol kinase AMJAP_2063 IPR000577 Carbohydrate kinase, FGGY AMJAP_2063 IPR018485 Carbohydrate kinase, FGGY, C-terminal AMJAP_2063 IPR018483 Carbohydrate kinase, FGGY, conserved site AMJAP_2067 IPR010987 Glutathione S-transferase, C-terminal-like AMJAP_2067 IPR004045 Glutathione S-transferase, N-terminal AMJAP_2067 IPR004046 Glutathione S-transferase, C-terminal AMJAP_2067 IPR036249 Thioredoxin-like superfamily AMJAP_2067 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMJAP_2069 IPR036567 Ribosome hibernation promotion factor-like AMJAP_2069 IPR003489 Ribosome hibernation promoting factor/RaiA AMJAP_2071 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing AMJAP_2071 IPR035919 EAL domain superfamily AMJAP_2071 IPR013976 Metal-dependent hydrolase HDOD AMJAP_2071 IPR001633 EAL domain AMJAP_2073 IPR038021 Putative hydro-lyase AMJAP_2073 IPR016938 Uncharacterised protein family UPF0317 AMJAP_2073 IPR009906 D-glutamate cyclase AMJAP_2074 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel AMJAP_2074 IPR005501 LamB/YcsF/PxpA-like AMJAP_2075 IPR003833 Carboxyltransferase domain, subdomain C and D AMJAP_2075 IPR029000 Cyclophilin-like domain superfamily AMJAP_2075 IPR010016 KipI family AMJAP_2076 IPR003778 Carboxyltransferase domain, subdomain A and B AMJAP_2076 IPR029000 Cyclophilin-like domain superfamily AMJAP_2078 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AMJAP_2078 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMJAP_2078 IPR005856 Cysteine synthase AMJAP_2078 IPR005858 Cysteine synthase CysM AMJAP_2078 IPR001926 Pyridoxal-phosphate dependent enzyme AMJAP_2079 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2079 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2079 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMJAP_2079 IPR011008 Dimeric alpha-beta barrel AMJAP_2079 IPR000485 AsnC-type HTH domain AMJAP_2079 IPR011991 ArsR-like helix-turn-helix domain AMJAP_2079 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMJAP_2079 IPR019888 Transcription regulator AsnC-type AMJAP_2080 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2080 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2080 IPR000847 Transcription regulator HTH, LysR AMJAP_2080 IPR005119 LysR, substrate-binding AMJAP_2081 IPR001544 Aminotransferase class IV AMJAP_2081 IPR018300 Aminotransferase, class IV, conserved site AMJAP_2081 IPR036038 Aminotransferase-like, PLP-dependent enzymes AMJAP_2081 IPR005784 D-amino acid aminotransferase AMJAP_2084 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMJAP_2084 IPR013785 Aldolase-type TIM barrel AMJAP_2087 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_2087 IPR041698 Methyltransferase domain 25 AMJAP_2089 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2089 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain AMJAP_2089 IPR002121 HRDC domain AMJAP_2089 IPR010997 HRDC-like superfamily AMJAP_2089 IPR001650 Helicase, C-terminal AMJAP_2089 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial AMJAP_2089 IPR018982 RQC domain AMJAP_2089 IPR004589 DNA helicase, ATP-dependent, RecQ type AMJAP_2089 IPR011545 DEAD/DEAH box helicase domain AMJAP_2089 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_2089 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2090 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2090 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2090 IPR005814 Aminotransferase class-III AMJAP_2090 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2091 IPR010102 Succinate semialdehyde dehydrogenase AMJAP_2091 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_2091 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_2091 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_2091 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_2091 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_2091 IPR015590 Aldehyde dehydrogenase domain AMJAP_2092 IPR005119 LysR, substrate-binding AMJAP_2092 IPR000847 Transcription regulator HTH, LysR AMJAP_2092 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2092 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2093 IPR006015 Universal stress protein A family AMJAP_2093 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2093 IPR006016 UspA AMJAP_2094 IPR004681 TRAP transporter large membrane protein DctM AMJAP_2094 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_2096 IPR038404 TRAP transporter solute receptor DctP superfamily AMJAP_2096 IPR018389 TRAP transporter solute receptor DctP/TeaA AMJAP_2096 IPR004682 TRAP transporter solute receptor, DctP family AMJAP_2097 IPR000847 Transcription regulator HTH, LysR AMJAP_2097 IPR005119 LysR, substrate-binding AMJAP_2097 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2097 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2098 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2098 IPR006076 FAD dependent oxidoreductase AMJAP_2099 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal AMJAP_2100 IPR000620 EamA domain AMJAP_2102 IPR004682 TRAP transporter solute receptor, DctP family AMJAP_2102 IPR018389 TRAP transporter solute receptor DctP/TeaA AMJAP_2102 IPR038404 TRAP transporter solute receptor DctP superfamily AMJAP_2104 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_2104 IPR007387 TRAP transporter, small membrane protein DctQ AMJAP_2104 IPR004681 TRAP transporter large membrane protein DctM AMJAP_2106 IPR029319 DNA ligase, OB-like domain AMJAP_2106 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2106 IPR012310 DNA ligase, ATP-dependent, central AMJAP_2106 IPR016059 DNA ligase, ATP-dependent, conserved site AMJAP_2107 IPR010061 Methylmalonate-semialdehyde dehydrogenase AMJAP_2107 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_2107 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_2107 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_2107 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_2107 IPR015590 Aldehyde dehydrogenase domain AMJAP_2108 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2108 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2108 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2108 IPR005814 Aminotransferase class-III AMJAP_2109 IPR000847 Transcription regulator HTH, LysR AMJAP_2109 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2109 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2109 IPR005119 LysR, substrate-binding AMJAP_2112 IPR036249 Thioredoxin-like superfamily AMJAP_2112 IPR016639 Glutathione S-transferase Omega/GSH AMJAP_2112 IPR004045 Glutathione S-transferase, N-terminal AMJAP_2112 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMJAP_2112 IPR010987 Glutathione S-transferase, C-terminal-like AMJAP_2115 IPR000160 GGDEF domain AMJAP_2115 IPR029787 Nucleotide cyclase AMJAP_2116 IPR011129 Cold shock domain AMJAP_2116 IPR012156 Cold shock, CspA AMJAP_2116 IPR019844 Cold-shock (CSD) domain AMJAP_2116 IPR002059 Cold-shock protein, DNA-binding AMJAP_2116 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2117 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2117 IPR002059 Cold-shock protein, DNA-binding AMJAP_2117 IPR019844 Cold-shock (CSD) domain AMJAP_2117 IPR011129 Cold shock domain AMJAP_2117 IPR012156 Cold shock, CspA AMJAP_2119 IPR005119 LysR, substrate-binding AMJAP_2119 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2119 IPR000847 Transcription regulator HTH, LysR AMJAP_2119 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2120 IPR004739 GMP synthase, glutamine amidotransferase AMJAP_2120 IPR001674 GMP synthase, C-terminal AMJAP_2120 IPR022955 GMP synthase AMJAP_2120 IPR029062 Class I glutamine amidotransferase-like AMJAP_2120 IPR017926 Glutamine amidotransferase AMJAP_2120 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2120 IPR025777 GMP synthetase ATP pyrophosphatase domain AMJAP_2120 IPR022310 NAD/GMP synthase AMJAP_2121 IPR001674 GMP synthase, C-terminal AMJAP_2121 IPR017926 Glutamine amidotransferase AMJAP_2121 IPR029062 Class I glutamine amidotransferase-like AMJAP_2121 IPR022310 NAD/GMP synthase AMJAP_2121 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2121 IPR022955 GMP synthase AMJAP_2121 IPR025777 GMP synthetase ATP pyrophosphatase domain AMJAP_2121 IPR004739 GMP synthase, glutamine amidotransferase AMJAP_2122 IPR035906 MetI-like superfamily AMJAP_2122 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_2123 IPR035906 MetI-like superfamily AMJAP_2123 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_2124 IPR013611 Transport-associated OB, type 2 AMJAP_2124 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit AMJAP_2124 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2124 IPR008995 Molybdate/tungstate binding, C-terminal AMJAP_2124 IPR003593 AAA+ ATPase domain AMJAP_2124 IPR003439 ABC transporter-like AMJAP_2124 IPR017871 ABC transporter, conserved site AMJAP_2125 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein AMJAP_2125 IPR006059 Bacterial extracellular solute-binding protein AMJAP_2126 IPR036651 Glutamine synthetase, N-terminal domain superfamily AMJAP_2126 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMJAP_2126 IPR008146 Glutamine synthetase, catalytic domain AMJAP_2126 IPR027303 Glutamine synthetase, glycine-rich site AMJAP_2128 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2128 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2128 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2128 IPR005814 Aminotransferase class-III AMJAP_2131 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_2131 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_2131 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_2131 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_2131 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_2131 IPR015590 Aldehyde dehydrogenase domain AMJAP_2133 IPR001123 Amino acid exporter protein, LeuE-type AMJAP_2134 IPR037522 HD-GYP domain AMJAP_2134 IPR011006 CheY-like superfamily AMJAP_2134 IPR003607 HD/PDEase domain AMJAP_2134 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2136 IPR004839 Aminotransferase, class I/classII AMJAP_2136 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2136 IPR000524 Transcription regulator HTH, GntR AMJAP_2136 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2136 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2136 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2137 IPR023696 Ureohydrolase domain superfamily AMJAP_2137 IPR005925 Agmatinase-related AMJAP_2137 IPR006035 Ureohydrolase AMJAP_2137 IPR020855 Ureohydrolase, manganese-binding site AMJAP_2137 IPR023694 Agmatinase AMJAP_2138 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2138 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2138 IPR000847 Transcription regulator HTH, LysR AMJAP_2138 IPR005119 LysR, substrate-binding AMJAP_2139 IPR000390 Small multidrug resistance protein family AMJAP_2144 IPR011006 CheY-like superfamily AMJAP_2144 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_2144 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2144 IPR000792 Transcription regulator LuxR, C-terminal AMJAP_2146 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_2146 IPR004681 TRAP transporter large membrane protein DctM AMJAP_2148 IPR038404 TRAP transporter solute receptor DctP superfamily AMJAP_2148 IPR026289 Solute binding protein, TakP-like AMJAP_2148 IPR041722 Alpha-keto acid binding periplasmic protein AMJAP_2148 IPR018389 TRAP transporter solute receptor DctP/TeaA AMJAP_2149 IPR002505 Phosphate acetyl/butaryl transferase AMJAP_2149 IPR004614 Phosphate acetyltransferase AMJAP_2149 IPR042113 Phosphate acetyltransferase, domain 1 AMJAP_2149 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2149 IPR042112 Phosphate acetyltransferase, domain 2 AMJAP_2149 IPR016475 Phosphate acetyltransferase, bacteria AMJAP_2149 IPR010766 DRTGG AMJAP_2149 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily AMJAP_2150 IPR013560 Domain of unknown function DUF1722 AMJAP_2151 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily AMJAP_2151 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain AMJAP_2151 IPR006050 DNA photolyase, N-terminal AMJAP_2151 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2151 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily AMJAP_2151 IPR002081 Cryptochrome/DNA photolyase class 1 AMJAP_2151 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal AMJAP_2152 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2152 IPR003593 AAA+ ATPase domain AMJAP_2152 IPR002477 Peptidoglycan binding-like AMJAP_2152 IPR036365 PGBD-like superfamily AMJAP_2152 IPR036366 PGBD superfamily AMJAP_2155 IPR023753 FAD/NAD(P)-binding domain AMJAP_2155 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2155 IPR022890 Ferredoxin--NADP reductase, type 2 AMJAP_2156 IPR013026 Tetratricopeptide repeat-containing domain AMJAP_2156 IPR017560 Cytochrome c-type biogenesis protein CcmI AMJAP_2156 IPR019734 Tetratricopeptide repeat AMJAP_2156 IPR019734 Tetratricopeptide repeat AMJAP_2156 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_2156 IPR013026 Tetratricopeptide repeat-containing domain AMJAP_2156 IPR017560 Cytochrome c-type biogenesis protein CcmI AMJAP_2156 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_2162 IPR003593 AAA+ ATPase domain AMJAP_2162 IPR042181 Type II secretion system, protein E, N-terminal AMJAP_2162 IPR007831 General secretory system II, protein E, N-terminal AMJAP_2162 IPR013369 Type II secretion system GspE AMJAP_2162 IPR037257 General secretory system II, protein E, N-terminal superfamily AMJAP_2162 IPR001482 Type II/IV secretion system protein AMJAP_2162 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2163 IPR042094 Type II secretion system F domain superfamily AMJAP_2163 IPR018076 Type II secretion system F domain AMJAP_2163 IPR003004 GspF/PilC family AMJAP_2164 IPR012902 Prokaryotic N-terminal methylation site AMJAP_2164 IPR000983 Bacterial general secretion pathway protein G-type pilin AMJAP_2164 IPR013545 Type II secretion system protein G AMJAP_2164 IPR010054 General secretion pathway protein G AMJAP_2168 IPR038072 GspK, central domain superfamily AMJAP_2168 IPR005628 General secretion pathway protein K AMJAP_2169 IPR001610 PAC motif AMJAP_2169 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_2169 IPR000014 PAS domain AMJAP_2169 IPR035965 PAS domain superfamily AMJAP_2169 IPR013767 PAS fold AMJAP_2169 IPR013655 PAS fold-3 AMJAP_2169 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_2169 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_2169 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_2169 IPR005467 Histidine kinase domain AMJAP_2169 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_2170 IPR003593 AAA+ ATPase domain AMJAP_2170 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_2170 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_2170 IPR011006 CheY-like superfamily AMJAP_2170 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2170 IPR009057 Homeobox-like domain superfamily AMJAP_2170 IPR002197 DNA binding HTH domain, Fis-type AMJAP_2170 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2170 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_2170 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_2171 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_2171 IPR013767 PAS fold AMJAP_2171 IPR035965 PAS domain superfamily AMJAP_2171 IPR000014 PAS domain AMJAP_2171 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_2171 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_2171 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_2171 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_2171 IPR005467 Histidine kinase domain AMJAP_2173 IPR013766 Thioredoxin domain AMJAP_2173 IPR036249 Thioredoxin-like superfamily AMJAP_2173 IPR003782 Copper chaperone SCO1/SenC AMJAP_2180 IPR015500 Peptidase S8, subtilisin-related AMJAP_2180 IPR023827 Peptidase S8, subtilisin, Asp-active site AMJAP_2180 IPR036852 Peptidase S8/S53 domain superfamily AMJAP_2180 IPR034202 Subtilisin Carlsberg-like catalytic domain AMJAP_2180 IPR000209 Peptidase S8/S53 domain AMJAP_2180 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 AMJAP_2180 IPR023828 Peptidase S8, subtilisin, Ser-active site AMJAP_2180 IPR022398 Peptidase S8, subtilisin, His-active site AMJAP_2180 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily AMJAP_2184 IPR001775 GspD/PilQ family AMJAP_2184 IPR004845 Type II secretion system GspD, conserved site AMJAP_2184 IPR004846 Type II/III secretion system AMJAP_2184 IPR013356 Type II secretion system GspD AMJAP_2184 IPR005644 NolW-like AMJAP_2184 IPR038591 NolW-like superfamily AMJAP_2186 IPR025979 ChrR-like cupin domain AMJAP_2186 IPR014710 RmlC-like jelly roll fold AMJAP_2186 IPR012807 Anti-sigma factor ChrR, putative AMJAP_2186 IPR011051 RmlC-like cupin domain superfamily AMJAP_2187 IPR039425 RNA polymerase sigma-70 like AMJAP_2187 IPR014284 RNA polymerase sigma-70 like domain AMJAP_2187 IPR007630 RNA polymerase sigma-70 region 4 AMJAP_2187 IPR013325 RNA polymerase sigma factor, region 2 AMJAP_2187 IPR013324 RNA polymerase sigma factor, region 3/4-like AMJAP_2187 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2187 IPR007627 RNA polymerase sigma-70 region 2 AMJAP_2188 IPR028261 Dihydroprymidine dehydrogenase domain II AMJAP_2188 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2188 IPR023753 FAD/NAD(P)-binding domain AMJAP_2188 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 AMJAP_2188 IPR009051 Alpha-helical ferredoxin AMJAP_2190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_2190 IPR003333 Mycolic acid cyclopropane synthase AMJAP_2193 IPR036291 NAD(P)-binding domain superfamily AMJAP_2193 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_2197 IPR000160 GGDEF domain AMJAP_2197 IPR029787 Nucleotide cyclase AMJAP_2197 IPR005330 MHYT domain AMJAP_2197 IPR035919 EAL domain superfamily AMJAP_2197 IPR001633 EAL domain AMJAP_2197 IPR035965 PAS domain superfamily AMJAP_2198 IPR034330 Glutathione S-transferases, class Zeta , C-terminal AMJAP_2198 IPR004045 Glutathione S-transferase, N-terminal AMJAP_2198 IPR040079 Glutathione Transferase family AMJAP_2198 IPR004046 Glutathione S-transferase, C-terminal AMJAP_2198 IPR010987 Glutathione S-transferase, C-terminal-like AMJAP_2198 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMJAP_2198 IPR005955 Glutathione S-transferases, class Zeta AMJAP_2198 IPR034333 Glutathione S-transferases, class Zeta , N-terminal AMJAP_2198 IPR036249 Thioredoxin-like superfamily AMJAP_2201 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2201 IPR005119 LysR, substrate-binding AMJAP_2201 IPR000847 Transcription regulator HTH, LysR AMJAP_2201 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2203 IPR013225 PaaX-like, C-terminal AMJAP_2203 IPR012906 PaaX-like, N-terminal AMJAP_2203 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2203 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX AMJAP_2204 IPR023446 Carnitine operon protein CaiE AMJAP_2204 IPR011004 Trimeric LpxA-like superfamily AMJAP_2204 IPR001451 Hexapeptide repeat AMJAP_2205 IPR015590 Aldehyde dehydrogenase domain AMJAP_2205 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_2205 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_2205 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_2205 IPR017656 Putative phosphonoacetaldehyde dehydrogenase AMJAP_2205 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_2205 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_2206 IPR014748 Enoyl-CoA hydratase, C-terminal AMJAP_2206 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_2206 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMJAP_2206 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_2207 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB AMJAP_2207 IPR014748 Enoyl-CoA hydratase, C-terminal AMJAP_2207 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_2207 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_2208 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_2208 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AMJAP_2208 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMJAP_2208 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMJAP_2208 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMJAP_2208 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC AMJAP_2208 IPR036291 NAD(P)-binding domain superfamily AMJAP_2209 IPR006683 Thioesterase domain AMJAP_2209 IPR003736 Phenylacetic acid degradation-related domain AMJAP_2209 IPR011973 Phenylacetic acid degradation protein PaaD AMJAP_2209 IPR029069 HotDog domain superfamily AMJAP_2210 IPR016039 Thiolase-like AMJAP_2210 IPR020610 Thiolase, active site AMJAP_2210 IPR020615 Thiolase, acyl-enzyme intermediate active site AMJAP_2210 IPR020613 Thiolase, conserved site AMJAP_2210 IPR002155 Thiolase AMJAP_2210 IPR020617 Thiolase, C-terminal AMJAP_2210 IPR012793 Beta-ketoadipyl CoA thiolase AMJAP_2210 IPR020616 Thiolase, N-terminal AMJAP_2211 IPR011880 Phenylacetate-CoA ligase AMJAP_2211 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_2211 IPR000873 AMP-dependent synthetase/ligase AMJAP_2211 IPR028154 AMP-dependent ligase, C-terminal AMJAP_2212 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C AMJAP_2212 IPR012347 Ferritin-like AMJAP_2212 IPR009078 Ferritin-like superfamily AMJAP_2212 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A AMJAP_2213 IPR009359 Phenylacetic acid degradation B AMJAP_2213 IPR038693 Phenylacetyl-CoA epoxidase, subunit B AMJAP_2214 IPR009078 Ferritin-like superfamily AMJAP_2214 IPR012347 Ferritin-like AMJAP_2214 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C AMJAP_2214 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C AMJAP_2215 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit AMJAP_2215 IPR002744 MIP18 family-like AMJAP_2215 IPR034904 Fe-S cluster assembly domain superfamily AMJAP_2216 IPR017938 Riboflavin synthase-like beta-barrel AMJAP_2216 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMJAP_2216 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMJAP_2216 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMJAP_2216 IPR012675 Beta-grasp domain superfamily AMJAP_2216 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMJAP_2216 IPR036010 2Fe-2S ferredoxin-like superfamily AMJAP_2216 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMJAP_2216 IPR017927 FAD-binding domain, ferredoxin reductase-type AMJAP_2216 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMJAP_2216 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit AMJAP_2217 IPR002539 MaoC-like dehydratase domain AMJAP_2217 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_2217 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_2217 IPR015590 Aldehyde dehydrogenase domain AMJAP_2217 IPR029069 HotDog domain superfamily AMJAP_2217 IPR011966 Phenylacetic acid degradation protein PaaN AMJAP_2217 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_2218 IPR007413 Protein of unknown function DUF463, YcjX-like protein AMJAP_2225 IPR021810 Protein of unknown function DUF3387 AMJAP_2225 IPR040980 SWI2/SNF2 ATPase AMJAP_2225 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_2225 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2225 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal AMJAP_2225 IPR004473 Restriction endonuclease, type I, HsdR AMJAP_2228 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily AMJAP_2228 IPR003356 DNA methylase, adenine-specific AMJAP_2228 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMJAP_2228 IPR004546 Restriction endonuclease, type I, HsdM AMJAP_2228 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain AMJAP_2228 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_2229 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AMJAP_2229 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding AMJAP_2229 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 AMJAP_2229 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMJAP_2229 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial AMJAP_2229 IPR033910 Glutamyl-tRNA synthetase AMJAP_2229 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2229 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AMJAP_2230 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2230 IPR011006 CheY-like superfamily AMJAP_2231 IPR003439 ABC transporter-like AMJAP_2231 IPR017871 ABC transporter, conserved site AMJAP_2231 IPR005890 Nitrate transport ATP-binding subunit C/D AMJAP_2231 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2231 IPR003593 AAA+ ATPase domain AMJAP_2232 IPR006311 Twin-arginine translocation pathway, signal sequence AMJAP_2232 IPR029070 Chitinase insertion domain superfamily AMJAP_2233 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_2233 IPR035906 MetI-like superfamily AMJAP_2233 IPR005889 Nitrate transport permease AMJAP_2234 IPR005890 Nitrate transport ATP-binding subunit C/D AMJAP_2234 IPR003593 AAA+ ATPase domain AMJAP_2234 IPR003439 ABC transporter-like AMJAP_2234 IPR017871 ABC transporter, conserved site AMJAP_2234 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2235 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AMJAP_2235 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2235 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMJAP_2235 IPR023753 FAD/NAD(P)-binding domain AMJAP_2235 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal AMJAP_2235 IPR007419 BFD-like [2Fe-2S]-binding domain AMJAP_2235 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AMJAP_2235 IPR017121 Nitrite reductase [NAD(P)H], large subunit AMJAP_2235 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB AMJAP_2235 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AMJAP_2235 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AMJAP_2235 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily AMJAP_2236 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily AMJAP_2236 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain AMJAP_2236 IPR007419 BFD-like [2Fe-2S]-binding domain AMJAP_2236 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain AMJAP_2236 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMJAP_2236 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal AMJAP_2236 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB AMJAP_2236 IPR023753 FAD/NAD(P)-binding domain AMJAP_2236 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2236 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site AMJAP_2236 IPR017121 Nitrite reductase [NAD(P)H], large subunit AMJAP_2237 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type AMJAP_2237 IPR017881 Nitrite reductase (NADH) small subunit AMJAP_2237 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMJAP_2238 IPR007419 BFD-like [2Fe-2S]-binding domain AMJAP_2238 IPR006657 Molybdopterin dinucleotide-binding domain AMJAP_2238 IPR006656 Molybdopterin oxidoreductase AMJAP_2238 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain AMJAP_2238 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMJAP_2238 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AMJAP_2238 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMJAP_2238 IPR009010 Aspartate decarboxylase-like domain superfamily AMJAP_2239 IPR000829 DAGK family AMJAP_2239 IPR033718 Diacylglycerol kinase, prokaryotic AMJAP_2239 IPR036945 Diacylglycerol kinase (DAGK) superfamily AMJAP_2241 IPR001269 tRNA-dihydrouridine synthase AMJAP_2241 IPR018517 tRNA-dihydrouridine synthase, conserved site AMJAP_2241 IPR035587 DUS-like, FMN-binding domain AMJAP_2241 IPR013785 Aldolase-type TIM barrel AMJAP_2241 IPR004653 tRNA-dihydrouridine(20/20a) synthase AMJAP_2242 IPR001585 Transaldolase/Fructose-6-phosphate aldolase AMJAP_2242 IPR013785 Aldolase-type TIM barrel AMJAP_2242 IPR004730 Transaldolase type 1 AMJAP_2242 IPR018225 Transaldolase, active site AMJAP_2243 IPR007428 MlaA lipoprotein AMJAP_2244 IPR001702 Porin, Gram-negative type AMJAP_2244 IPR002299 Porin, Neisseria sp. type AMJAP_2244 IPR023614 Porin domain superfamily AMJAP_2244 IPR033900 Porin domain, Gram-negative type AMJAP_2245 IPR010222 RNA helicase HrpA AMJAP_2245 IPR003593 AAA+ ATPase domain AMJAP_2245 IPR011709 Domain of unknown function DUF1605 AMJAP_2245 IPR011545 DEAD/DEAH box helicase domain AMJAP_2245 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2245 IPR024590 RNA helicase HrpA, C-terminal AMJAP_2245 IPR001650 Helicase, C-terminal AMJAP_2245 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_2245 IPR007502 Helicase-associated domain AMJAP_2246 IPR017932 Glutamine amidotransferase type 2 domain AMJAP_2246 IPR029055 Nucleophile aminohydrolases, N-terminal AMJAP_2246 IPR026869 Putative glutamine amidotransferase type 2 AMJAP_2248 IPR016047 Peptidase M23 AMJAP_2248 IPR007340 Opacity-associated protein A AMJAP_2248 IPR011055 Duplicated hybrid motif AMJAP_2251 IPR016039 Thiolase-like AMJAP_2251 IPR020617 Thiolase, C-terminal AMJAP_2251 IPR020610 Thiolase, active site AMJAP_2251 IPR020616 Thiolase, N-terminal AMJAP_2251 IPR002155 Thiolase AMJAP_2251 IPR020615 Thiolase, acyl-enzyme intermediate active site AMJAP_2252 IPR002872 Proline dehydrogenase domain AMJAP_2252 IPR010985 Ribbon-helix-helix AMJAP_2252 IPR024082 Proline dehydrogenase PutA, domain II AMJAP_2252 IPR015590 Aldehyde dehydrogenase domain AMJAP_2252 IPR029041 FAD-linked oxidoreductase-like AMJAP_2252 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_2252 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_2252 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_2252 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_2252 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain AMJAP_2252 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_2252 IPR024089 Proline dehydrogenase PutA, domain I/II AMJAP_2252 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 AMJAP_2252 IPR025703 Bifunctional protein PutA AMJAP_2252 IPR013321 Arc-type ribbon-helix-helix AMJAP_2252 IPR024090 Proline dehydrogenase PutA, domain I AMJAP_2253 IPR021826 Domain of unknown function DUF3412 AMJAP_2253 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal AMJAP_2253 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily AMJAP_2253 IPR031100 LOG family AMJAP_2254 IPR003000 Sirtuin family AMJAP_2254 IPR027546 Sirtuin, class III AMJAP_2254 IPR026590 Sirtuin family, catalytic core domain AMJAP_2254 IPR026591 Sirtuin, catalytic core small domain superfamily AMJAP_2254 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMJAP_2255 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2255 IPR003714 PhoH-like protein AMJAP_2255 IPR029060 PIN-like domain superfamily AMJAP_2255 IPR002716 PIN domain AMJAP_2256 IPR002696 Putative membrane protein insertion efficiency factor AMJAP_2258 IPR010920 LSM domain superfamily AMJAP_2258 IPR006686 Mechanosensitive ion channel MscS, conserved site AMJAP_2258 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 AMJAP_2258 IPR008910 Conserved TM helix AMJAP_2258 IPR011066 Mechanosensitive ion channel MscS, C-terminal AMJAP_2258 IPR023408 Mechanosensitive ion channel MscS domain superfamily AMJAP_2258 IPR006685 Mechanosensitive ion channel MscS AMJAP_2259 IPR006935 Helicase/UvrB, N-terminal AMJAP_2259 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_2259 IPR001650 Helicase, C-terminal AMJAP_2259 IPR011332 Zinc-binding ribosomal protein AMJAP_2259 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2260 IPR000847 Transcription regulator HTH, LysR AMJAP_2260 IPR005119 LysR, substrate-binding AMJAP_2260 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2260 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2263 IPR037944 Peroxiredoxin-5-like AMJAP_2263 IPR002109 Glutaredoxin AMJAP_2263 IPR011767 Glutaredoxin active site AMJAP_2263 IPR013766 Thioredoxin domain AMJAP_2263 IPR013740 Redoxin AMJAP_2263 IPR036249 Thioredoxin-like superfamily AMJAP_2265 IPR011606 Branched-chain amino acid transport, permease AMJAP_2265 IPR004471 Branched-chain amino acid transport, AzlC AMJAP_2271 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site AMJAP_2271 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AMJAP_2272 IPR000847 Transcription regulator HTH, LysR AMJAP_2272 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2272 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2272 IPR037417 HTH-type transcriptional regulator SyrM, PBP2 domain AMJAP_2272 IPR005119 LysR, substrate-binding AMJAP_2273 IPR004778 Homoserine/Threonine efflux protein AMJAP_2273 IPR001123 Amino acid exporter protein, LeuE-type AMJAP_2274 IPR007329 FMN-binding AMJAP_2274 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_2274 IPR011399 Nitrous oxide reductase expression regulator NosR AMJAP_2275 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2275 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2275 IPR000847 Transcription regulator HTH, LysR AMJAP_2275 IPR005119 LysR, substrate-binding AMJAP_2276 IPR005025 NADPH-dependent FMN reductase-like AMJAP_2276 IPR029039 Flavoprotein-like superfamily AMJAP_2276 IPR008254 Flavodoxin/nitric oxide synthase AMJAP_2277 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AMJAP_2277 IPR016174 Di-haem cytochrome, transmembrane AMJAP_2278 IPR007372 Lipid/polyisoprenoid-binding, YceI-like AMJAP_2278 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily AMJAP_2278 IPR023480 Uncharacterised protein family UPF0312/YceI AMJAP_2279 IPR029069 HotDog domain superfamily AMJAP_2279 IPR006683 Thioesterase domain AMJAP_2279 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain AMJAP_2279 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase AMJAP_2280 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG AMJAP_2280 IPR031100 LOG family AMJAP_2281 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2281 IPR012156 Cold shock, CspA AMJAP_2281 IPR011129 Cold shock domain AMJAP_2281 IPR019844 Cold-shock (CSD) domain AMJAP_2281 IPR002059 Cold-shock protein, DNA-binding AMJAP_2282 IPR018636 Protein of unknown function DUF2058 AMJAP_2283 IPR019844 Cold-shock (CSD) domain AMJAP_2283 IPR011129 Cold shock domain AMJAP_2283 IPR012156 Cold shock, CspA AMJAP_2283 IPR002059 Cold-shock protein, DNA-binding AMJAP_2283 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2286 IPR003437 Glycine dehydrogenase (decarboxylating) AMJAP_2286 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2286 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2286 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2286 IPR020581 Glycine cleavage system P protein AMJAP_2287 IPR002930 Glycine cleavage system H-protein AMJAP_2287 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMJAP_2287 IPR033753 Glycine cleavage system H-protein/Simiate AMJAP_2287 IPR017453 Glycine cleavage system H-protein, subgroup AMJAP_2287 IPR000089 Biotin/lipoyl attachment AMJAP_2287 IPR011053 Single hybrid motif AMJAP_2288 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AMJAP_2288 IPR039429 Serine hydroxymethyltransferase-like domain AMJAP_2288 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2288 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2288 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2288 IPR001085 Serine hydroxymethyltransferase AMJAP_2289 IPR029009 Allosteric substrate binding domain superfamily AMJAP_2289 IPR005130 Serine dehydratase-like, alpha subunit AMJAP_2289 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form AMJAP_2289 IPR005131 Serine dehydratase beta chain AMJAP_2291 IPR001463 Sodium:alanine symporter AMJAP_2292 IPR006223 Glycine cleavage system T protein AMJAP_2292 IPR028896 Aminomethyltransferase-like AMJAP_2292 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AMJAP_2292 IPR006222 Aminomethyltransferase, folate-binding domain AMJAP_2292 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMJAP_2292 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AMJAP_2292 IPR022903 Glycine cleavage system T protein, bacteria AMJAP_2293 IPR007197 Radical SAM AMJAP_2293 IPR013785 Aldolase-type TIM barrel AMJAP_2293 IPR006638 Elp3/MiaB/NifB AMJAP_2293 IPR003698 Lipoyl synthase AMJAP_2294 IPR002575 Aminoglycoside phosphotransferase AMJAP_2294 IPR005280 Homoserine kinase, type II AMJAP_2294 IPR011009 Protein kinase-like domain superfamily AMJAP_2297 IPR010462 Ectoine synthase AMJAP_2297 IPR011051 RmlC-like cupin domain superfamily AMJAP_2297 IPR014710 RmlC-like jelly roll fold AMJAP_2298 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2298 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2298 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2298 IPR012773 Ectoine biosynthetic protein AMJAP_2298 IPR004637 2,4-diaminobutyrate 4-transaminase AMJAP_2298 IPR005814 Aminotransferase class-III AMJAP_2299 IPR000182 GNAT domain AMJAP_2299 IPR016181 Acyl-CoA N-acyltransferase AMJAP_2299 IPR012772 L-2,4-diaminobutyric acid acetyltransferase AMJAP_2300 IPR000835 MarR-type HTH domain AMJAP_2300 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2300 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2301 IPR011079 Alanine racemase, C-terminal AMJAP_2301 IPR029066 PLP-binding barrel AMJAP_2301 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site AMJAP_2301 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal AMJAP_2301 IPR001608 Alanine racemase, N-terminal AMJAP_2301 IPR000821 Alanine racemase AMJAP_2302 IPR006175 YjgF/YER057c/UK114 family AMJAP_2302 IPR035959 RutC-like superfamily AMJAP_2302 IPR019897 RidA, conserved site AMJAP_2302 IPR006056 RidA family AMJAP_2303 IPR023080 D-amino acid dehydrogenase DadA AMJAP_2303 IPR006076 FAD dependent oxidoreductase AMJAP_2303 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2304 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2304 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMJAP_2304 IPR019888 Transcription regulator AsnC-type AMJAP_2304 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMJAP_2304 IPR000485 AsnC-type HTH domain AMJAP_2304 IPR011991 ArsR-like helix-turn-helix domain AMJAP_2304 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2304 IPR011008 Dimeric alpha-beta barrel AMJAP_2305 IPR005119 LysR, substrate-binding AMJAP_2305 IPR000847 Transcription regulator HTH, LysR AMJAP_2305 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2305 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2305 IPR011781 D-serine deaminase transcriptional activator AMJAP_2306 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMJAP_2306 IPR011780 D-serine ammonia-lyase AMJAP_2306 IPR001926 Pyridoxal-phosphate dependent enzyme AMJAP_2307 IPR001463 Sodium:alanine symporter AMJAP_2308 IPR022742 Serine aminopeptidase, S33 AMJAP_2308 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_2308 IPR029058 Alpha/Beta hydrolase fold AMJAP_2309 IPR005119 LysR, substrate-binding AMJAP_2309 IPR000847 Transcription regulator HTH, LysR AMJAP_2309 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2309 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2310 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2310 IPR005814 Aminotransferase class-III AMJAP_2310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2311 IPR001387 Cro/C1-type helix-turn-helix domain AMJAP_2311 IPR013096 Cupin 2, conserved barrel AMJAP_2311 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMJAP_2311 IPR011051 RmlC-like cupin domain superfamily AMJAP_2311 IPR014710 RmlC-like jelly roll fold AMJAP_2312 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_2312 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_2312 IPR010102 Succinate semialdehyde dehydrogenase AMJAP_2312 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_2312 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_2312 IPR015590 Aldehyde dehydrogenase domain AMJAP_2312 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_2313 IPR023606 CoA-transferase family III domain superfamily AMJAP_2313 IPR003673 CoA-transferase family III AMJAP_2314 IPR006089 Acyl-CoA dehydrogenase, conserved site AMJAP_2314 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMJAP_2314 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMJAP_2314 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMJAP_2314 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMJAP_2314 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMJAP_2314 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMJAP_2315 IPR007401 Protein of unknown function DUF454 AMJAP_2316 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal AMJAP_2316 IPR038071 UROD/MetE-like superfamily AMJAP_2316 IPR006276 Cobalamin-independent methionine synthase AMJAP_2316 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal AMJAP_2318 IPR004391 Glutamate racemase AMJAP_2318 IPR015942 Asp/Glu/hydantoin racemase AMJAP_2318 IPR001920 Asp/Glu racemase AMJAP_2318 IPR018187 Asp/Glu racemase, active site 1 AMJAP_2318 IPR033134 Asp/Glu racemase, active site 2 AMJAP_2322 IPR023753 FAD/NAD(P)-binding domain AMJAP_2322 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2322 IPR007419 BFD-like [2Fe-2S]-binding domain AMJAP_2322 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMJAP_2322 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B AMJAP_2324 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2324 IPR006076 FAD dependent oxidoreductase AMJAP_2325 IPR038404 TRAP transporter solute receptor DctP superfamily AMJAP_2325 IPR018389 TRAP transporter solute receptor DctP/TeaA AMJAP_2325 IPR004682 TRAP transporter solute receptor, DctP family AMJAP_2326 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_2326 IPR004681 TRAP transporter large membrane protein DctM AMJAP_2326 IPR007387 TRAP transporter, small membrane protein DctQ AMJAP_2328 IPR005119 LysR, substrate-binding AMJAP_2328 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2328 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2328 IPR000847 Transcription regulator HTH, LysR AMJAP_2328 IPR037414 Transcriptional activator protein LysR, PBP2 domain AMJAP_2330 IPR004400 Urease accessory protein UreG AMJAP_2330 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2330 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMJAP_2331 IPR038277 UreF domain superfamily AMJAP_2331 IPR002639 Urease accessory protein UreF AMJAP_2332 IPR012406 Urease accessory protein UreE AMJAP_2332 IPR004029 UreE urease accessory, N-terminal AMJAP_2332 IPR007864 Urease accessory protein UreE, C-terminal domain AMJAP_2332 IPR036675 UreE, C-terminal domain superfamily AMJAP_2332 IPR036118 UreE urease accessory, N-terminal domain superfamily AMJAP_2333 IPR005848 Urease, alpha subunit AMJAP_2333 IPR017950 Urease active site AMJAP_2333 IPR011612 Urease alpha-subunit, N-terminal domain AMJAP_2333 IPR032466 Metal-dependent hydrolase AMJAP_2333 IPR017951 Urease alpha subunit, C-terminal AMJAP_2333 IPR029754 Urease nickel binding site AMJAP_2333 IPR006680 Amidohydrolase-related AMJAP_2333 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMJAP_2334 IPR036461 Urease, beta subunit superfamily AMJAP_2334 IPR002019 Urease, beta subunit AMJAP_2335 IPR036463 Urease, gamma subunit superfamily AMJAP_2335 IPR002026 Urease, gamma/gamma-beta subunit AMJAP_2335 IPR012010 Urease, gamma subunit AMJAP_2336 IPR002669 Urease accessory protein UreD AMJAP_2337 IPR003593 AAA+ ATPase domain AMJAP_2337 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AMJAP_2337 IPR003439 ABC transporter-like AMJAP_2337 IPR017871 ABC transporter, conserved site AMJAP_2337 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2338 IPR017871 ABC transporter, conserved site AMJAP_2338 IPR003593 AAA+ ATPase domain AMJAP_2338 IPR003439 ABC transporter-like AMJAP_2338 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMJAP_2338 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2340 IPR001851 ABC transporter, permease AMJAP_2344 IPR018062 HTH domain AraC-type, conserved site AMJAP_2344 IPR032783 AraC-type transcription regulator, ligand-binding domain AMJAP_2344 IPR018060 DNA binding HTH domain, AraC-type AMJAP_2344 IPR009057 Homeobox-like domain superfamily AMJAP_2347 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2347 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_2347 IPR011006 CheY-like superfamily AMJAP_2347 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2347 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_2348 IPR011006 CheY-like superfamily AMJAP_2348 IPR035965 PAS domain superfamily AMJAP_2348 IPR029151 Periplasmic sensor-like domain superfamily AMJAP_2348 IPR015387 LuxQ, periplasmic AMJAP_2348 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_2348 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_2348 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2348 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_2348 IPR005467 Histidine kinase domain AMJAP_2348 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_2348 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_2350 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2350 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2350 IPR000847 Transcription regulator HTH, LysR AMJAP_2350 IPR005119 LysR, substrate-binding AMJAP_2351 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AMJAP_2351 IPR036928 Amidase signature (AS) superfamily AMJAP_2351 IPR023631 Amidase signature domain AMJAP_2351 IPR000120 Amidase AMJAP_2351 IPR020556 Amidase, conserved site AMJAP_2355 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMJAP_2355 IPR012675 Beta-grasp domain superfamily AMJAP_2355 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMJAP_2355 IPR036010 2Fe-2S ferredoxin-like superfamily AMJAP_2355 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMJAP_2355 IPR000951 Phthalate dioxygenase reductase AMJAP_2355 IPR017927 FAD-binding domain, ferredoxin reductase-type AMJAP_2355 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMJAP_2355 IPR017938 Riboflavin synthase-like beta-barrel AMJAP_2356 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMJAP_2356 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMJAP_2356 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AMJAP_2356 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AMJAP_2356 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AMJAP_2357 IPR004361 Glyoxalase I AMJAP_2357 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMJAP_2357 IPR037523 Vicinal oxygen chelate (VOC) domain AMJAP_2357 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMJAP_2357 IPR018146 Glyoxalase I, conserved site AMJAP_2359 IPR004681 TRAP transporter large membrane protein DctM AMJAP_2359 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_2362 IPR005119 LysR, substrate-binding AMJAP_2362 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2362 IPR000847 Transcription regulator HTH, LysR AMJAP_2362 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2365 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily AMJAP_2365 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_2365 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain AMJAP_2365 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_2365 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily AMJAP_2365 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site AMJAP_2365 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain AMJAP_2366 IPR036010 2Fe-2S ferredoxin-like superfamily AMJAP_2366 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_2366 IPR009010 Aspartate decarboxylase-like domain superfamily AMJAP_2366 IPR006478 Formate dehydrogenase, alpha subunit AMJAP_2366 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMJAP_2366 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding AMJAP_2366 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_2366 IPR006656 Molybdopterin oxidoreductase AMJAP_2366 IPR006657 Molybdopterin dinucleotide-binding domain AMJAP_2366 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMJAP_2366 IPR041924 Formate dehydrogenase H, N-terminal AMJAP_2367 IPR003786 Sulfur carrier protein FdhD AMJAP_2367 IPR016193 Cytidine deaminase-like AMJAP_2374 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_2374 IPR004681 TRAP transporter large membrane protein DctM AMJAP_2374 IPR007387 TRAP transporter, small membrane protein DctQ AMJAP_2376 IPR004682 TRAP transporter solute receptor, DctP family AMJAP_2376 IPR038404 TRAP transporter solute receptor DctP superfamily AMJAP_2376 IPR018389 TRAP transporter solute receptor DctP/TeaA AMJAP_2377 IPR036291 NAD(P)-binding domain superfamily AMJAP_2377 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_2380 IPR018062 HTH domain AraC-type, conserved site AMJAP_2380 IPR018060 DNA binding HTH domain, AraC-type AMJAP_2380 IPR009057 Homeobox-like domain superfamily AMJAP_2380 IPR002818 DJ-1/PfpI AMJAP_2380 IPR029062 Class I glutamine amidotransferase-like AMJAP_2381 IPR036291 NAD(P)-binding domain superfamily AMJAP_2381 IPR014184 Formaldehyde dehydrogenase, glutathione-independent AMJAP_2381 IPR011032 GroES-like superfamily AMJAP_2381 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMJAP_2381 IPR013154 Alcohol dehydrogenase, N-terminal AMJAP_2381 IPR013149 Alcohol dehydrogenase, C-terminal AMJAP_2383 IPR000644 CBS domain AMJAP_2384 IPR001834 NADH:cytochrome b5 reductase-like AMJAP_2384 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMJAP_2384 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMJAP_2384 IPR009050 Globin-like superfamily AMJAP_2384 IPR012292 Globin/Protoglobin AMJAP_2384 IPR017927 FAD-binding domain, ferredoxin reductase-type AMJAP_2384 IPR023950 Flavohemoprotein AMJAP_2384 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMJAP_2384 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMJAP_2384 IPR017938 Riboflavin synthase-like beta-barrel AMJAP_2384 IPR000971 Globin AMJAP_2385 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain AMJAP_2385 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site AMJAP_2385 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit AMJAP_2385 IPR017941 Rieske [2Fe-2S] iron-sulphur domain AMJAP_2385 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily AMJAP_2386 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_2386 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMJAP_2386 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain AMJAP_2386 IPR000304 Pyrroline-5-carboxylate reductase AMJAP_2386 IPR036291 NAD(P)-binding domain superfamily AMJAP_2388 IPR018093 BCCT transporter, conserved site AMJAP_2388 IPR000060 BCCT transporter family AMJAP_2390 IPR001308 Electron transfer flavoprotein alpha subunit/FixB AMJAP_2390 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AMJAP_2390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2390 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AMJAP_2390 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal AMJAP_2390 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMJAP_2390 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site AMJAP_2391 IPR009051 Alpha-helical ferredoxin AMJAP_2391 IPR036197 NarG-like superfamily AMJAP_2391 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_2391 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_2391 IPR004017 Cysteine-rich domain AMJAP_2392 IPR013785 Aldolase-type TIM barrel AMJAP_2392 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2392 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMJAP_2396 IPR018062 HTH domain AraC-type, conserved site AMJAP_2396 IPR029062 Class I glutamine amidotransferase-like AMJAP_2396 IPR002818 DJ-1/PfpI AMJAP_2396 IPR009057 Homeobox-like domain superfamily AMJAP_2396 IPR018060 DNA binding HTH domain, AraC-type AMJAP_2397 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_2397 IPR011006 CheY-like superfamily AMJAP_2397 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2397 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_2397 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_2397 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2399 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2399 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AMJAP_2399 IPR036641 HPT domain superfamily AMJAP_2399 IPR005467 Histidine kinase domain AMJAP_2399 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_2399 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_2399 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_2399 IPR011006 CheY-like superfamily AMJAP_2399 IPR003660 HAMP domain AMJAP_2399 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_2399 IPR033414 Periplasmic sensor domain AMJAP_2399 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_2401 IPR004681 TRAP transporter large membrane protein DctM AMJAP_2401 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_2404 IPR018060 DNA binding HTH domain, AraC-type AMJAP_2404 IPR029062 Class I glutamine amidotransferase-like AMJAP_2404 IPR009057 Homeobox-like domain superfamily AMJAP_2404 IPR020449 Transcription regulator HTH, AraC- type AMJAP_2404 IPR018062 HTH domain AraC-type, conserved site AMJAP_2405 IPR029009 Allosteric substrate binding domain superfamily AMJAP_2405 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form AMJAP_2405 IPR005130 Serine dehydratase-like, alpha subunit AMJAP_2405 IPR005131 Serine dehydratase beta chain AMJAP_2406 IPR004810 Formyltetrahydrofolate deformylase AMJAP_2406 IPR002376 Formyl transferase, N-terminal AMJAP_2406 IPR002912 ACT domain AMJAP_2406 IPR036477 Formyl transferase, N-terminal domain superfamily AMJAP_2406 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain AMJAP_2408 IPR041117 SoxA, A3 domain AMJAP_2408 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily AMJAP_2408 IPR006277 Sarcosine oxidase, alpha subunit AMJAP_2408 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2408 IPR023753 FAD/NAD(P)-binding domain AMJAP_2408 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AMJAP_2408 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal AMJAP_2408 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AMJAP_2408 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMJAP_2408 IPR006222 Aminomethyltransferase, folate-binding domain AMJAP_2410 IPR006076 FAD dependent oxidoreductase AMJAP_2410 IPR006278 Sarcosine oxidase subunit beta AMJAP_2410 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2411 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2411 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2411 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2411 IPR001085 Serine hydroxymethyltransferase AMJAP_2411 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site AMJAP_2411 IPR039429 Serine hydroxymethyltransferase-like domain AMJAP_2412 IPR018060 DNA binding HTH domain, AraC-type AMJAP_2412 IPR009057 Homeobox-like domain superfamily AMJAP_2412 IPR029062 Class I glutamine amidotransferase-like AMJAP_2412 IPR020449 Transcription regulator HTH, AraC- type AMJAP_2412 IPR018062 HTH domain AraC-type, conserved site AMJAP_2415 IPR029058 Alpha/Beta hydrolase fold AMJAP_2415 IPR013094 Alpha/beta hydrolase fold-3 AMJAP_2415 IPR002168 Lipase, GDXG, putative histidine active site AMJAP_2415 IPR033140 Lipase, GDXG, putative serine active site AMJAP_2416 IPR001451 Hexapeptide repeat AMJAP_2416 IPR011004 Trimeric LpxA-like superfamily AMJAP_2416 IPR023446 Carnitine operon protein CaiE AMJAP_2417 IPR022838 GTP cyclohydrolase FolE2 AMJAP_2417 IPR003801 GTP cyclohydrolase FolE2/MptA AMJAP_2418 IPR004722 Dihydroorotase AMJAP_2418 IPR032466 Metal-dependent hydrolase AMJAP_2418 IPR006680 Amidohydrolase-related AMJAP_2418 IPR002195 Dihydroorotase, conserved site AMJAP_2418 IPR011059 Metal-dependent hydrolase, composite domain superfamily AMJAP_2419 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily AMJAP_2419 IPR026660 Phosphoribosyl-AMP cyclohydrolase AMJAP_2419 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain AMJAP_2421 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMJAP_2421 IPR011032 GroES-like superfamily AMJAP_2421 IPR014043 Acyl transferase AMJAP_2421 IPR018201 Beta-ketoacyl synthase, active site AMJAP_2421 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMJAP_2421 IPR013154 Alcohol dehydrogenase, N-terminal AMJAP_2421 IPR036347 Erythronolide synthase, docking domain superfamily AMJAP_2421 IPR015357 Erythronolide synthase, docking AMJAP_2421 IPR036736 ACP-like superfamily AMJAP_2421 IPR001227 Acyl transferase domain superfamily AMJAP_2421 IPR032821 Ketoacyl-synthetase, C-terminal extension AMJAP_2421 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMJAP_2421 IPR036291 NAD(P)-binding domain superfamily AMJAP_2421 IPR015083 Polyketide synthase, docking domain AMJAP_2421 IPR042104 Polyketide synthase, dehydratase domain superfamily AMJAP_2421 IPR020843 Polyketide synthase, enoylreductase domain AMJAP_2421 IPR013968 Polyketide synthase, ketoreductase domain AMJAP_2421 IPR016039 Thiolase-like AMJAP_2421 IPR006162 Phosphopantetheine attachment site AMJAP_2421 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMJAP_2421 IPR009081 Phosphopantetheine binding ACP domain AMJAP_2421 IPR020807 Polyketide synthase, dehydratase domain AMJAP_2421 IPR014031 Beta-ketoacyl synthase, C-terminal AMJAP_2421 IPR014030 Beta-ketoacyl synthase, N-terminal AMJAP_2422 IPR000847 Transcription regulator HTH, LysR AMJAP_2422 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2422 IPR005119 LysR, substrate-binding AMJAP_2422 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2423 IPR001853 DSBA-like thioredoxin domain AMJAP_2423 IPR014440 HCCA isomerase/glutathione S-transferase kappa AMJAP_2423 IPR036249 Thioredoxin-like superfamily AMJAP_2424 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2424 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2424 IPR007432 Protein of unknown function DUF480 AMJAP_2425 IPR005163 3-alpha domain AMJAP_2425 IPR005302 Molybdenum cofactor sulfurase, C-terminal AMJAP_2425 IPR011037 Pyruvate kinase-like, insert domain superfamily AMJAP_2426 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_2426 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_2426 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2426 IPR003593 AAA+ ATPase domain AMJAP_2426 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_2426 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_2426 IPR002197 DNA binding HTH domain, Fis-type AMJAP_2426 IPR009057 Homeobox-like domain superfamily AMJAP_2426 IPR029016 GAF-like domain superfamily AMJAP_2426 IPR003018 GAF domain AMJAP_2429 IPR036487 Quinohemoprotein amine dehydrogenase, gamma subunit structural domain superfamily AMJAP_2429 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain AMJAP_2432 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_2432 IPR015590 Aldehyde dehydrogenase domain AMJAP_2432 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_2432 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_2432 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_2432 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_2433 IPR002938 FAD-binding domain AMJAP_2433 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2434 IPR022398 Peptidase S8, subtilisin, His-active site AMJAP_2434 IPR023827 Peptidase S8, subtilisin, Asp-active site AMJAP_2434 IPR015500 Peptidase S8, subtilisin-related AMJAP_2434 IPR000209 Peptidase S8/S53 domain AMJAP_2434 IPR036852 Peptidase S8/S53 domain superfamily AMJAP_2434 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily AMJAP_2434 IPR023828 Peptidase S8, subtilisin, Ser-active site AMJAP_2434 IPR034202 Subtilisin Carlsberg-like catalytic domain AMJAP_2435 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMJAP_2435 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2435 IPR017871 ABC transporter, conserved site AMJAP_2435 IPR003593 AAA+ ATPase domain AMJAP_2435 IPR039421 Type I protein exporter AMJAP_2435 IPR003439 ABC transporter-like AMJAP_2435 IPR011527 ABC transporter type 1, transmembrane domain AMJAP_2437 IPR036487 Quinohemoprotein amine dehydrogenase, gamma subunit structural domain superfamily AMJAP_2437 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain AMJAP_2440 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2440 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_2440 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_2440 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2440 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_2440 IPR011006 CheY-like superfamily AMJAP_2441 IPR033414 Periplasmic sensor domain AMJAP_2441 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AMJAP_2441 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_2441 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_2441 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_2441 IPR003660 HAMP domain AMJAP_2441 IPR036641 HPT domain superfamily AMJAP_2441 IPR011006 CheY-like superfamily AMJAP_2441 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2441 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_2441 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_2441 IPR005467 Histidine kinase domain AMJAP_2442 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_2442 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_2442 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_2442 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_2442 IPR015590 Aldehyde dehydrogenase domain AMJAP_2442 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_2444 IPR000755 D-alanyl-D-alanine dipeptidase AMJAP_2444 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily AMJAP_2445 IPR012156 Cold shock, CspA AMJAP_2445 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2445 IPR012751 CspD, cold shock AMJAP_2445 IPR002059 Cold-shock protein, DNA-binding AMJAP_2445 IPR019844 Cold-shock (CSD) domain AMJAP_2445 IPR011129 Cold shock domain AMJAP_2446 IPR035919 EAL domain superfamily AMJAP_2446 IPR001633 EAL domain AMJAP_2446 IPR005330 MHYT domain AMJAP_2446 IPR000160 GGDEF domain AMJAP_2446 IPR029787 Nucleotide cyclase AMJAP_2447 IPR014014 RNA helicase, DEAD-box type, Q motif AMJAP_2447 IPR011545 DEAD/DEAH box helicase domain AMJAP_2447 IPR028622 ATP-dependent RNA helicase RhlE AMJAP_2447 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2447 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_2447 IPR001650 Helicase, C-terminal AMJAP_2447 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMJAP_2448 IPR011701 Major facilitator superfamily AMJAP_2448 IPR036259 MFS transporter superfamily AMJAP_2448 IPR004737 Nitrate transporter AMJAP_2449 IPR036259 MFS transporter superfamily AMJAP_2449 IPR020846 Major facilitator superfamily domain AMJAP_2449 IPR011701 Major facilitator superfamily AMJAP_2450 IPR003660 HAMP domain AMJAP_2450 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_2450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_2450 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMJAP_2450 IPR029095 NarX-like, N-terminal AMJAP_2450 IPR042295 NarX-like, N-terminal domain superfamily AMJAP_2450 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing AMJAP_2450 IPR005467 Histidine kinase domain AMJAP_2451 IPR011006 CheY-like superfamily AMJAP_2451 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_2451 IPR000792 Transcription regulator LuxR, C-terminal AMJAP_2451 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2451 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2452 IPR036259 MFS transporter superfamily AMJAP_2452 IPR020846 Major facilitator superfamily domain AMJAP_2452 IPR011701 Major facilitator superfamily AMJAP_2452 IPR004737 Nitrate transporter AMJAP_2453 IPR000719 Protein kinase domain AMJAP_2453 IPR005543 PASTA domain AMJAP_2453 IPR011009 Protein kinase-like domain superfamily AMJAP_2453 IPR008271 Serine/threonine-protein kinase, active site AMJAP_2453 IPR017441 Protein kinase, ATP binding site AMJAP_2454 IPR013785 Aldolase-type TIM barrel AMJAP_2454 IPR001989 Radical-activating enzyme, conserved site AMJAP_2454 IPR040074 BssD/PflA/YjjW AMJAP_2454 IPR012838 Pyruvate formate-lyase 1 activating enzyme AMJAP_2454 IPR012839 Organic radical enzyme activase AMJAP_2454 IPR034457 Organic radical-activating enzymes AMJAP_2454 IPR007197 Radical SAM AMJAP_2454 IPR034465 Pyruvate formate-lyase activase AMJAP_2458 IPR025877 MobA-like NTP transferase AMJAP_2458 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_2458 IPR013482 Molybdenum cofactor guanylyltransferase AMJAP_2459 IPR005111 MoeA, C-terminal, domain IV AMJAP_2459 IPR036425 MoaB/Mog-like domain superfamily AMJAP_2459 IPR001453 MoaB/Mog domain AMJAP_2459 IPR008284 Molybdenum cofactor biosynthesis, conserved site AMJAP_2459 IPR038987 Molybdopterin biosynthesis protein MoeA-like AMJAP_2459 IPR036688 MoeA, C-terminal, domain IV superfamily AMJAP_2459 IPR005110 MoeA, N-terminal and linker domain AMJAP_2459 IPR036135 MoeA, N-terminal and linker domain superfamily AMJAP_2460 IPR036425 MoaB/Mog-like domain superfamily AMJAP_2460 IPR008284 Molybdenum cofactor biosynthesis, conserved site AMJAP_2460 IPR012245 Molybdenum cofactor biosynthesis protein MoaB AMJAP_2460 IPR001453 MoaB/Mog domain AMJAP_2460 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria AMJAP_2461 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2461 IPR012318 Crp-type HTH domain AMJAP_2461 IPR000595 Cyclic nucleotide-binding domain AMJAP_2461 IPR022299 Transcription regulator, NtcA AMJAP_2461 IPR014710 RmlC-like jelly roll fold AMJAP_2461 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2461 IPR018490 Cyclic nucleotide-binding-like AMJAP_2461 IPR018335 Transcription regulator HTH, Crp-type, conserved site AMJAP_2462 IPR007197 Radical SAM AMJAP_2462 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AMJAP_2462 IPR013483 Molybdenum cofactor biosynthesis protein A AMJAP_2462 IPR013785 Aldolase-type TIM barrel AMJAP_2462 IPR010505 Molybdenum cofactor synthesis C-terminal AMJAP_2462 IPR006638 Elp3/MiaB/NifB AMJAP_2463 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site AMJAP_2463 IPR036874 Carbonic anhydrase superfamily AMJAP_2463 IPR001765 Carbonic anhydrase AMJAP_2464 IPR023034 Peptidyl-prolyl isomerase SurA AMJAP_2464 IPR015391 SurA N-terminal AMJAP_2464 IPR027304 Trigger factor/SurA domain superfamily AMJAP_2464 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type AMJAP_2465 IPR003816 Nitrate reductase, gamma subunit AMJAP_2465 IPR036197 NarG-like superfamily AMJAP_2465 IPR023234 NarG-like domain AMJAP_2466 IPR003765 Nitrate reductase chaperone, NarJ AMJAP_2466 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 AMJAP_2466 IPR020945 DMSO/Nitrate reductase chaperone AMJAP_2466 IPR036411 TorD-like superfamily AMJAP_2466 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 AMJAP_2467 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_2467 IPR038262 Nitrate reductase beta, C-terminal domain superfamily AMJAP_2467 IPR029263 Respiratory nitrate reductase beta, C-terminal AMJAP_2467 IPR006547 Nitrate reductase, beta subunit AMJAP_2468 IPR006657 Molybdopterin dinucleotide-binding domain AMJAP_2468 IPR006656 Molybdopterin oxidoreductase AMJAP_2468 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain AMJAP_2468 IPR009010 Aspartate decarboxylase-like domain superfamily AMJAP_2468 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site AMJAP_2468 IPR037943 Nitrate reductase alpha subunit-like, MopB domain AMJAP_2468 IPR006468 Nitrate reductase, alpha subunit AMJAP_2468 IPR028189 Nitrate reductase, alpha subunit, N-terminal AMJAP_2468 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site AMJAP_2473 IPR029787 Nucleotide cyclase AMJAP_2473 IPR001633 EAL domain AMJAP_2473 IPR035919 EAL domain superfamily AMJAP_2473 IPR000160 GGDEF domain AMJAP_2473 IPR005330 MHYT domain AMJAP_2474 IPR005119 LysR, substrate-binding AMJAP_2474 IPR000847 Transcription regulator HTH, LysR AMJAP_2474 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2474 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2477 IPR023631 Amidase signature domain AMJAP_2477 IPR036928 Amidase signature (AS) superfamily AMJAP_2477 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AMJAP_2477 IPR020556 Amidase, conserved site AMJAP_2477 IPR000120 Amidase AMJAP_2480 IPR003593 AAA+ ATPase domain AMJAP_2480 IPR032781 ABC-transporter extension domain AMJAP_2480 IPR003439 ABC transporter-like AMJAP_2480 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2484 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_2484 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_2484 IPR005467 Histidine kinase domain AMJAP_2484 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_2484 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_2484 IPR003660 HAMP domain AMJAP_2485 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2485 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_2485 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2485 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_2485 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_2485 IPR011006 CheY-like superfamily AMJAP_2490 IPR029787 Nucleotide cyclase AMJAP_2490 IPR000160 GGDEF domain AMJAP_2491 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AMJAP_2491 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site AMJAP_2491 IPR036291 NAD(P)-binding domain superfamily AMJAP_2491 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase AMJAP_2491 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AMJAP_2492 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_2492 IPR013023 Ketol-acid reductoisomerase AMJAP_2492 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMJAP_2492 IPR036291 NAD(P)-binding domain superfamily AMJAP_2492 IPR000506 Ketol-acid reductoisomerase, C-terminal AMJAP_2492 IPR013116 Ketol-acid reductoisomerase, N-terminal AMJAP_2493 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2493 IPR003439 ABC transporter-like AMJAP_2493 IPR003593 AAA+ ATPase domain AMJAP_2494 IPR036661 Luciferase-like domain superfamily AMJAP_2494 IPR019949 Luciferase family oxidoreductase, group 1 AMJAP_2494 IPR011251 Luciferase-like domain AMJAP_2498 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2498 IPR025669 AAA domain AMJAP_2499 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMJAP_2499 IPR004090 Chemotaxis methyl-accepting receptor AMJAP_2499 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_2499 IPR000727 Target SNARE coiled-coil homology domain AMJAP_2499 IPR003660 HAMP domain AMJAP_2500 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2500 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_2500 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase AMJAP_2501 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMJAP_2501 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMJAP_2501 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMJAP_2501 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMJAP_2501 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMJAP_2501 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMJAP_2501 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMJAP_2502 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMJAP_2502 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2502 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site AMJAP_2502 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal AMJAP_2502 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal AMJAP_2502 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AMJAP_2502 IPR001308 Electron transfer flavoprotein alpha subunit/FixB AMJAP_2503 IPR012255 Electron transfer flavoprotein, beta subunit AMJAP_2503 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site AMJAP_2503 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal AMJAP_2503 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2503 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal AMJAP_2504 IPR009057 Homeobox-like domain superfamily AMJAP_2504 IPR037923 Transcription regulator HTH-like AMJAP_2504 IPR018060 DNA binding HTH domain, AraC-type AMJAP_2504 IPR003313 AraC-type arabinose-binding/dimerisation domain AMJAP_2504 IPR020449 Transcription regulator HTH, AraC- type AMJAP_2504 IPR018062 HTH domain AraC-type, conserved site AMJAP_2506 IPR000873 AMP-dependent synthetase/ligase AMJAP_2506 IPR020845 AMP-binding, conserved site AMJAP_2506 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_2506 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_2507 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_2507 IPR011006 CheY-like superfamily AMJAP_2507 IPR005467 Histidine kinase domain AMJAP_2507 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_2507 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_2507 IPR000014 PAS domain AMJAP_2507 IPR035965 PAS domain superfamily AMJAP_2507 IPR013656 PAS fold-4 AMJAP_2507 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_2507 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_2507 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2508 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2508 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_2508 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_2508 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_2508 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2508 IPR011006 CheY-like superfamily AMJAP_2510 IPR013525 ABC-2 type transporter AMJAP_2510 IPR000412 ABC-2 transporter AMJAP_2511 IPR003593 AAA+ ATPase domain AMJAP_2511 IPR003439 ABC transporter-like AMJAP_2511 IPR017871 ABC transporter, conserved site AMJAP_2511 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2514 IPR012349 FMN-binding split barrel AMJAP_2514 IPR002563 Flavin reductase like domain AMJAP_2515 IPR008490 Transposase InsH, N-terminal AMJAP_2515 IPR002559 Transposase, IS4-like AMJAP_2516 IPR006016 UspA AMJAP_2518 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AMJAP_2518 IPR016705 Photosynthesis system II assembly factor Ycf48/Hcf136 AMJAP_2518 IPR028203 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain AMJAP_2519 IPR010752 Protein of unknown function DUF1329 AMJAP_2522 IPR000073 Alpha/beta hydrolase fold-1 AMJAP_2522 IPR000639 Epoxide hydrolase-like AMJAP_2522 IPR016292 Epoxide hydrolase AMJAP_2522 IPR029058 Alpha/Beta hydrolase fold AMJAP_2523 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 AMJAP_2523 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 AMJAP_2523 IPR016166 FAD-binding domain, PCMH-type AMJAP_2523 IPR006094 FAD linked oxidase, N-terminal AMJAP_2523 IPR016167 FAD-binding, type PCMH, subdomain 1 AMJAP_2523 IPR012256 D-lactate dehydrogenase AMJAP_2523 IPR016169 FAD-binding, type PCMH, subdomain 2 AMJAP_2523 IPR016164 FAD-linked oxidase-like, C-terminal AMJAP_2523 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal AMJAP_2523 IPR036318 FAD-binding, type PCMH-like superfamily AMJAP_2524 IPR036291 NAD(P)-binding domain superfamily AMJAP_2524 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_2524 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_2525 IPR036291 NAD(P)-binding domain superfamily AMJAP_2525 IPR000534 Semialdehyde dehydrogenase, NAD-binding AMJAP_2525 IPR015426 Acetaldehyde dehydrogenase, C-terminal AMJAP_2525 IPR003361 Acetaldehyde dehydrogenase AMJAP_2526 IPR017629 4-hydroxy-2-oxovalerate aldolase AMJAP_2526 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain AMJAP_2526 IPR013785 Aldolase-type TIM barrel AMJAP_2526 IPR000891 Pyruvate carboxyltransferase AMJAP_2526 IPR012425 DmpG-like communication AMJAP_2528 IPR020459 AMP-binding AMJAP_2528 IPR020845 AMP-binding, conserved site AMJAP_2528 IPR000873 AMP-dependent synthetase/ligase AMJAP_2528 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_2528 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_2531 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE AMJAP_2531 IPR029479 Nitroreductase AMJAP_2531 IPR000415 Nitroreductase-like AMJAP_2532 IPR012799 Fatty oxidation complex, alpha subunit FadB AMJAP_2532 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_2532 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_2532 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_2532 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMJAP_2532 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMJAP_2532 IPR036291 NAD(P)-binding domain superfamily AMJAP_2532 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMJAP_2533 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_2533 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_2533 IPR014748 Enoyl-CoA hydratase, C-terminal AMJAP_2533 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB AMJAP_2534 IPR002155 Thiolase AMJAP_2534 IPR016039 Thiolase-like AMJAP_2534 IPR020615 Thiolase, acyl-enzyme intermediate active site AMJAP_2534 IPR020610 Thiolase, active site AMJAP_2534 IPR020616 Thiolase, N-terminal AMJAP_2534 IPR020613 Thiolase, conserved site AMJAP_2534 IPR020617 Thiolase, C-terminal AMJAP_2535 IPR009057 Homeobox-like domain superfamily AMJAP_2535 IPR018060 DNA binding HTH domain, AraC-type AMJAP_2535 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AMJAP_2535 IPR020449 Transcription regulator HTH, AraC- type AMJAP_2536 IPR036525 Tubulin/FtsZ, GTPase domain superfamily AMJAP_2536 IPR000158 Cell division protein FtsZ AMJAP_2536 IPR020805 Cell division protein FtsZ, conserved site AMJAP_2536 IPR024757 Cell division protein FtsZ, C-terminal AMJAP_2536 IPR008280 Tubulin/FtsZ, C-terminal AMJAP_2536 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMJAP_2536 IPR003008 Tubulin/FtsZ, GTPase domain AMJAP_2537 IPR020823 Cell division protein FtsA AMJAP_2537 IPR003494 SHS2 domain inserted in FtsA AMJAP_2539 IPR003798 DNA recombination RmuC AMJAP_2545 IPR025985 YnbE-like lipoprotein AMJAP_2550 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2550 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2550 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2550 IPR003437 Glycine dehydrogenase (decarboxylating) AMJAP_2550 IPR020581 Glycine cleavage system P protein AMJAP_2552 IPR004045 Glutathione S-transferase, N-terminal AMJAP_2552 IPR036249 Thioredoxin-like superfamily AMJAP_2552 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMJAP_2552 IPR040079 Glutathione Transferase family AMJAP_2552 IPR010987 Glutathione S-transferase, C-terminal-like AMJAP_2554 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2554 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2554 IPR005119 LysR, substrate-binding AMJAP_2554 IPR000847 Transcription regulator HTH, LysR AMJAP_2556 IPR005119 LysR, substrate-binding AMJAP_2556 IPR000847 Transcription regulator HTH, LysR AMJAP_2556 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2556 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2557 IPR011051 RmlC-like cupin domain superfamily AMJAP_2557 IPR014710 RmlC-like jelly roll fold AMJAP_2557 IPR012093 Pirin AMJAP_2557 IPR003829 Pirin, N-terminal domain AMJAP_2557 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain AMJAP_2558 IPR036380 Isochorismatase-like superfamily AMJAP_2558 IPR000868 Isochorismatase-like AMJAP_2559 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2559 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain AMJAP_2559 IPR004881 Ribosome biogenesis GTPase RsgA AMJAP_2559 IPR010914 RsgA GTPase domain AMJAP_2561 IPR004491 Heat shock protein HslU AMJAP_2561 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2561 IPR019489 Clp ATPase, C-terminal AMJAP_2561 IPR003959 ATPase, AAA-type, core AMJAP_2561 IPR003593 AAA+ ATPase domain AMJAP_2562 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMJAP_2562 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2562 IPR001650 Helicase, C-terminal AMJAP_2562 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMJAP_2562 IPR028622 ATP-dependent RNA helicase RhlE AMJAP_2562 IPR014014 RNA helicase, DEAD-box type, Q motif AMJAP_2562 IPR011545 DEAD/DEAH box helicase domain AMJAP_2565 IPR000847 Transcription regulator HTH, LysR AMJAP_2565 IPR005119 LysR, substrate-binding AMJAP_2565 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2565 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2566 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMJAP_2566 IPR040079 Glutathione Transferase family AMJAP_2566 IPR004045 Glutathione S-transferase, N-terminal AMJAP_2566 IPR010987 Glutathione S-transferase, C-terminal-like AMJAP_2566 IPR036249 Thioredoxin-like superfamily AMJAP_2568 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2568 IPR004592 Nuclease SbcC, gammaproteobacteria type AMJAP_2568 IPR038729 Rad50/SbcC-type AAA domain AMJAP_2569 IPR026843 Nuclease SbcCD subunit D, C-terminal domain AMJAP_2569 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type AMJAP_2569 IPR029052 Metallo-dependent phosphatase-like AMJAP_2569 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain AMJAP_2569 IPR004593 Nuclease SbcCD subunit D AMJAP_2570 IPR005115 Uncharacterised domain UPF0126 AMJAP_2573 IPR018060 DNA binding HTH domain, AraC-type AMJAP_2573 IPR037923 Transcription regulator HTH-like AMJAP_2573 IPR020449 Transcription regulator HTH, AraC- type AMJAP_2573 IPR018062 HTH domain AraC-type, conserved site AMJAP_2573 IPR003313 AraC-type arabinose-binding/dimerisation domain AMJAP_2573 IPR009057 Homeobox-like domain superfamily AMJAP_2574 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AMJAP_2574 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase AMJAP_2575 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB AMJAP_2575 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2575 IPR017871 ABC transporter, conserved site AMJAP_2575 IPR003439 ABC transporter-like AMJAP_2575 IPR003593 AAA+ ATPase domain AMJAP_2578 IPR016047 Peptidase M23 AMJAP_2578 IPR013731 Opacity-associated protein A, N-terminal AMJAP_2578 IPR018392 LysM domain AMJAP_2578 IPR011055 Duplicated hybrid motif AMJAP_2582 IPR016174 Di-haem cytochrome, transmembrane AMJAP_2582 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase AMJAP_2584 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain AMJAP_2584 IPR029000 Cyclophilin-like domain superfamily AMJAP_2584 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site AMJAP_2585 IPR000182 GNAT domain AMJAP_2585 IPR016181 Acyl-CoA N-acyltransferase AMJAP_2585 IPR029069 HotDog domain superfamily AMJAP_2585 IPR012660 Thioesterase, putative AMJAP_2586 IPR029479 Nitroreductase AMJAP_2586 IPR000415 Nitroreductase-like AMJAP_2586 IPR026021 Putative NAD(P)H nitroreductase YdjA-like AMJAP_2587 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal AMJAP_2587 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 AMJAP_2587 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF AMJAP_2588 IPR000412 ABC-2 transporter AMJAP_2588 IPR013525 ABC-2 type transporter AMJAP_2589 IPR017871 ABC transporter, conserved site AMJAP_2589 IPR003439 ABC transporter-like AMJAP_2589 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2589 IPR003593 AAA+ ATPase domain AMJAP_2591 IPR029787 Nucleotide cyclase AMJAP_2591 IPR000160 GGDEF domain AMJAP_2591 IPR001633 EAL domain AMJAP_2591 IPR035919 EAL domain superfamily AMJAP_2591 IPR005330 MHYT domain AMJAP_2594 IPR007272 Sulphur transport domain AMJAP_2595 IPR019885 Transcription regulator HTH, AsnC-type, conserved site AMJAP_2595 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2595 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2595 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain AMJAP_2595 IPR019888 Transcription regulator AsnC-type AMJAP_2595 IPR011008 Dimeric alpha-beta barrel AMJAP_2595 IPR000485 AsnC-type HTH domain AMJAP_2595 IPR011991 ArsR-like helix-turn-helix domain AMJAP_2596 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain AMJAP_2597 IPR000620 EamA domain AMJAP_2597 IPR004626 RarD protein AMJAP_2599 IPR005684 Integration host factor, alpha subunit AMJAP_2599 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily AMJAP_2599 IPR020816 Histone-like DNA-binding protein, conserved site AMJAP_2599 IPR000119 Histone-like DNA-binding protein AMJAP_2600 IPR005147 tRNA synthetase, B5-domain AMJAP_2600 IPR005146 B3/B4 tRNA-binding domain AMJAP_2600 IPR009061 Putative DNA-binding domain superfamily AMJAP_2600 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMJAP_2600 IPR005121 Ferrodoxin-fold anticodon-binding domain AMJAP_2600 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2600 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain AMJAP_2600 IPR002547 tRNA-binding domain AMJAP_2600 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain AMJAP_2600 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily AMJAP_2600 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit AMJAP_2601 IPR006195 Aminoacyl-tRNA synthetase, class II AMJAP_2601 IPR002319 Phenylalanyl-tRNA synthetase AMJAP_2601 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit AMJAP_2601 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal AMJAP_2601 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial AMJAP_2601 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AMJAP_2602 IPR005813 Ribosomal protein L20 AMJAP_2602 IPR035566 Ribosomal protein L20, C-terminal AMJAP_2603 IPR037229 Ribosomal protein L35 superfamily AMJAP_2603 IPR001706 Ribosomal protein L35, non-mitochondrial AMJAP_2603 IPR018265 Ribosomal protein L35, conserved site AMJAP_2603 IPR021137 Ribosomal protein L35 AMJAP_2604 IPR001288 Translation initiation factor 3 AMJAP_2604 IPR019815 Translation initiation factor 3, C-terminal AMJAP_2604 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily AMJAP_2604 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily AMJAP_2604 IPR019814 Translation initiation factor 3, N-terminal AMJAP_2605 IPR004154 Anticodon-binding AMJAP_2605 IPR004095 TGS AMJAP_2605 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) AMJAP_2605 IPR006195 Aminoacyl-tRNA synthetase, class II AMJAP_2605 IPR012675 Beta-grasp domain superfamily AMJAP_2605 IPR002320 Threonine-tRNA ligase, class IIa AMJAP_2605 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily AMJAP_2605 IPR036621 Anticodon-binding domain superfamily AMJAP_2605 IPR012947 Threonyl/alanyl tRNA synthetase, SAD AMJAP_2605 IPR012676 TGS-like AMJAP_2605 IPR033728 Threonine-tRNA ligase catalytic core domain AMJAP_2606 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2606 IPR008920 Transcription regulator FadR/GntR, C-terminal AMJAP_2606 IPR000524 Transcription regulator HTH, GntR AMJAP_2606 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2606 IPR014178 Fatty acid response transcription factor FadR AMJAP_2606 IPR028374 FadR, C-terminal domain AMJAP_2607 IPR022822 Lactate utilization protein A AMJAP_2607 IPR004017 Cysteine-rich domain AMJAP_2608 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_2608 IPR037171 NagB/RpiA transferase-like AMJAP_2608 IPR004452 4Fe-4S binding protein AMJAP_2608 IPR024569 4Fe-4S binding protein, C-terminal AMJAP_2608 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AMJAP_2608 IPR009051 Alpha-helical ferredoxin AMJAP_2608 IPR003741 LUD domain AMJAP_2608 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_2608 IPR022825 Lactate utilization protein B AMJAP_2609 IPR003741 LUD domain AMJAP_2609 IPR037171 NagB/RpiA transferase-like AMJAP_2609 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AMJAP_2610 IPR009056 Cytochrome c-like domain AMJAP_2610 IPR036909 Cytochrome c-like domain superfamily AMJAP_2610 IPR004852 Di-haem cytochrome c peroxidase AMJAP_2610 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase AMJAP_2610 IPR022394 Methylamine utilisation protein, MauG AMJAP_2611 IPR029787 Nucleotide cyclase AMJAP_2611 IPR005330 MHYT domain AMJAP_2611 IPR000160 GGDEF domain AMJAP_2611 IPR035919 EAL domain superfamily AMJAP_2611 IPR001633 EAL domain AMJAP_2613 IPR012337 Ribonuclease H-like superfamily AMJAP_2613 IPR006172 DNA-directed DNA polymerase, family B AMJAP_2613 IPR036397 Ribonuclease H superfamily AMJAP_2613 IPR017964 DNA-directed DNA polymerase, family B, conserved site AMJAP_2613 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain AMJAP_2613 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain AMJAP_2613 IPR042087 DNA polymerase family B, C-terminal domain AMJAP_2613 IPR023211 DNA polymerase, palm domain superfamily AMJAP_2616 IPR036554 GHMP kinase, C-terminal domain superfamily AMJAP_2616 IPR013750 GHMP kinase, C-terminal domain AMJAP_2616 IPR000870 Homoserine kinase AMJAP_2616 IPR006203 GHMP kinase, ATP-binding, conserved site AMJAP_2616 IPR006204 GHMP kinase N-terminal domain AMJAP_2616 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_2616 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_2617 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal AMJAP_2617 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain AMJAP_2617 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic AMJAP_2617 IPR016039 Thiolase-like AMJAP_2618 IPR000262 FMN-dependent dehydrogenase AMJAP_2618 IPR013785 Aldolase-type TIM barrel AMJAP_2618 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent AMJAP_2622 IPR001518 Argininosuccinate synthase AMJAP_2622 IPR023434 Argininosuccinate synthase, type 1 subfamily AMJAP_2622 IPR018223 Argininosuccinate synthase, conserved site AMJAP_2622 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body AMJAP_2622 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2624 IPR036397 Ribonuclease H superfamily AMJAP_2624 IPR012337 Ribonuclease H-like superfamily AMJAP_2624 IPR005987 Ribonuclease T AMJAP_2624 IPR013520 Exonuclease, RNase T/DNA polymerase III AMJAP_2625 IPR036249 Thioredoxin-like superfamily AMJAP_2625 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMJAP_2625 IPR024706 Peroxiredoxin, AhpC-type AMJAP_2625 IPR019479 Peroxiredoxin, C-terminal AMJAP_2625 IPR013766 Thioredoxin domain AMJAP_2626 IPR002109 Glutaredoxin AMJAP_2626 IPR033658 Glutaredoxin, PICOT-like AMJAP_2626 IPR014434 Monothiol glutaredoxin AMJAP_2626 IPR004480 Monothiol glutaredoxin-related AMJAP_2626 IPR036249 Thioredoxin-like superfamily AMJAP_2627 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2627 IPR005814 Aminotransferase class-III AMJAP_2627 IPR004636 Acetylornithine/Succinylornithine transaminase family AMJAP_2627 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2627 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2628 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain AMJAP_2628 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding AMJAP_2628 IPR006130 Aspartate/ornithine carbamoyltransferase AMJAP_2628 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily AMJAP_2628 IPR002292 Ornithine/putrescine carbamoyltransferase AMJAP_2628 IPR024904 Ornithine carbamoyltransferase AMJAP_2629 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2629 IPR000847 Transcription regulator HTH, LysR AMJAP_2629 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain AMJAP_2629 IPR005119 LysR, substrate-binding AMJAP_2629 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2631 IPR029032 AhpD-like AMJAP_2631 IPR003779 Carboxymuconolactone decarboxylase-like AMJAP_2631 IPR012788 4-carboxymuconolactone decarboxylase AMJAP_2632 IPR013785 Aldolase-type TIM barrel AMJAP_2632 IPR002480 DAHP synthetase, class II AMJAP_2636 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B AMJAP_2637 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B AMJAP_2641 IPR002646 Poly A polymerase, head domain AMJAP_2641 IPR038763 DHH phosphoesterase superfamily AMJAP_2641 IPR000644 CBS domain AMJAP_2642 IPR036477 Formyl transferase, N-terminal domain superfamily AMJAP_2642 IPR002376 Formyl transferase, N-terminal AMJAP_2642 IPR004810 Formyltetrahydrofolate deformylase AMJAP_2642 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain AMJAP_2642 IPR002912 ACT domain AMJAP_2643 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase AMJAP_2643 IPR013466 Thymidine phosphorylase/AMP phosphorylase AMJAP_2643 IPR000312 Glycosyl transferase, family 3 AMJAP_2643 IPR017459 Glycosyl transferase family 3, N-terminal domain AMJAP_2643 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily AMJAP_2643 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily AMJAP_2643 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily AMJAP_2643 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site AMJAP_2643 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal AMJAP_2643 IPR028579 Putative thymidine phosphorylase AMJAP_2646 IPR016446 Flavin oxidoreductase Frp family AMJAP_2646 IPR029479 Nitroreductase AMJAP_2646 IPR000415 Nitroreductase-like AMJAP_2649 IPR029787 Nucleotide cyclase AMJAP_2649 IPR005330 MHYT domain AMJAP_2649 IPR000160 GGDEF domain AMJAP_2649 IPR035919 EAL domain superfamily AMJAP_2649 IPR001633 EAL domain AMJAP_2650 IPR001094 Flavodoxin-like AMJAP_2650 IPR008254 Flavodoxin/nitric oxide synthase AMJAP_2650 IPR029039 Flavoprotein-like superfamily AMJAP_2653 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain AMJAP_2653 IPR011167 Iron-dependent fumarate hydratase AMJAP_2653 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain AMJAP_2653 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily AMJAP_2653 IPR020557 Fumarate lyase, conserved site AMJAP_2654 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase AMJAP_2654 IPR000537 UbiA prenyltransferase family AMJAP_2654 IPR026046 UbiA prenyltransferase domain containing protein 1 AMJAP_2655 IPR001539 Peptidase U32 AMJAP_2655 IPR032525 Peptidase family U32, C-terminal AMJAP_2657 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMJAP_2657 IPR004046 Glutathione S-transferase, C-terminal AMJAP_2657 IPR036249 Thioredoxin-like superfamily AMJAP_2657 IPR004045 Glutathione S-transferase, N-terminal AMJAP_2657 IPR010987 Glutathione S-transferase, C-terminal-like AMJAP_2659 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AMJAP_2659 IPR027413 GroEL-like equatorial domain superfamily AMJAP_2659 IPR027409 GroEL-like apical domain superfamily AMJAP_2659 IPR002423 Chaperonin Cpn60/TCP-1 family AMJAP_2659 IPR018370 Chaperonin Cpn60, conserved site AMJAP_2659 IPR001844 Chaperonin Cpn60 AMJAP_2660 IPR011032 GroES-like superfamily AMJAP_2660 IPR020818 GroES chaperonin family AMJAP_2660 IPR037124 GroES chaperonin superfamily AMJAP_2660 IPR018369 Chaperonin GroES, conserved site AMJAP_2661 IPR007313 FxsA cytoplasmic membrane protein AMJAP_2662 IPR036291 NAD(P)-binding domain superfamily AMJAP_2662 IPR020904 Short-chain dehydrogenase/reductase, conserved site AMJAP_2662 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_2663 IPR036259 MFS transporter superfamily AMJAP_2663 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 AMJAP_2663 IPR011701 Major facilitator superfamily AMJAP_2663 IPR020846 Major facilitator superfamily domain AMJAP_2664 IPR036183 YajQ-like superfamily AMJAP_2664 IPR035570 UPF0234, N-terminal AMJAP_2664 IPR007551 Protein of unknown function DUF520 AMJAP_2664 IPR035571 UPF0234-like, C-terminal AMJAP_2665 IPR013332 Ketopantoate reductase, N-terminal domain AMJAP_2665 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_2665 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMJAP_2665 IPR003710 Ketopantoate reductase ApbA/PanE AMJAP_2665 IPR013752 Ketopantoate reductase, C-terminal domain AMJAP_2665 IPR036291 NAD(P)-binding domain superfamily AMJAP_2666 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2666 IPR022488 Polyphosphate kinase-2-related AMJAP_2666 IPR022486 Polyphosphate kinase 2, PA0141 AMJAP_2667 IPR010917 TonB-dependent receptor, conserved site AMJAP_2667 IPR039426 Vitamin B12 transporter BtuB-like AMJAP_2667 IPR010101 TonB-dependent vitamin B12 transporter BtuB AMJAP_2667 IPR012910 TonB-dependent receptor, plug domain AMJAP_2667 IPR010916 TonB box, conserved site AMJAP_2667 IPR037066 TonB-dependent receptor, plug domain superfamily AMJAP_2667 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMJAP_2667 IPR000531 TonB-dependent receptor-like, beta-barrel AMJAP_2668 IPR016030 Cobalamin adenosyltransferase-like AMJAP_2668 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type AMJAP_2668 IPR036451 Cobalamin adenosyltransferase-like superfamily AMJAP_2670 IPR023544 ABC transporter, vitamin B12-binding protein AMJAP_2670 IPR002491 ABC transporter periplasmic binding domain AMJAP_2674 IPR020843 Polyketide synthase, enoylreductase domain AMJAP_2674 IPR036291 NAD(P)-binding domain superfamily AMJAP_2674 IPR011032 GroES-like superfamily AMJAP_2674 IPR013154 Alcohol dehydrogenase, N-terminal AMJAP_2674 IPR013149 Alcohol dehydrogenase, C-terminal AMJAP_2674 IPR014188 Acrylyl-CoA reductase AcuI AMJAP_2675 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2675 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2675 IPR008920 Transcription regulator FadR/GntR, C-terminal AMJAP_2675 IPR011711 GntR, C-terminal AMJAP_2675 IPR000524 Transcription regulator HTH, GntR AMJAP_2677 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily AMJAP_2677 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMJAP_2678 IPR009003 Peptidase S1, PA clan AMJAP_2678 IPR001940 Peptidase S1C AMJAP_2678 IPR001478 PDZ domain AMJAP_2678 IPR036034 PDZ superfamily AMJAP_2678 IPR011782 Peptidase S1C, Do AMJAP_2679 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_2679 IPR001692 Histidinol dehydrogenase, conserved site AMJAP_2679 IPR022695 Histidinol dehydrogenase, monofunctional AMJAP_2679 IPR012131 Histidinol dehydrogenase AMJAP_2680 IPR013820 ATP phosphoribosyltransferase, catalytic domain AMJAP_2680 IPR018198 ATP phosphoribosyltransferase, conserved site AMJAP_2680 IPR001348 ATP phosphoribosyltransferase HisG AMJAP_2680 IPR024893 ATP phosphoribosyltransferase HisG, short form AMJAP_2681 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta AMJAP_2681 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase AMJAP_2681 IPR001986 Enolpyruvate transferase domain AMJAP_2681 IPR036968 Enolpyruvate transferase domain superfamily AMJAP_2685 IPR003399 Mce/MlaD AMJAP_2685 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD AMJAP_2686 IPR003453 ABC transport permease subunit MlaE, Proteobacteria AMJAP_2686 IPR030802 ABC transporter permease MalE AMJAP_2687 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2687 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl AMJAP_2687 IPR017871 ABC transporter, conserved site AMJAP_2687 IPR003593 AAA+ ATPase domain AMJAP_2687 IPR003439 ABC transporter-like AMJAP_2688 IPR004837 Sodium/calcium exchanger membrane region AMJAP_2688 IPR004481 Sodium/potassium/calcium exchanger AMJAP_2689 IPR001347 Sugar isomerase (SIS) AMJAP_2689 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type AMJAP_2689 IPR035474 KpsF-like, SIS domain AMJAP_2689 IPR000644 CBS domain AMJAP_2692 IPR005653 Organic solvent tolerance-like, N-terminal AMJAP_2692 IPR014340 Lipopolysaccharide export system protein LptA AMJAP_2693 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2693 IPR030921 LPS export ABC transporter, ATP-binding protein LptB AMJAP_2693 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMJAP_2693 IPR017871 ABC transporter, conserved site AMJAP_2693 IPR003439 ABC transporter-like AMJAP_2693 IPR003593 AAA+ ATPase domain AMJAP_2694 IPR007046 RNA polymerase sigma factor 54, core-binding domain AMJAP_2694 IPR000394 RNA polymerase sigma factor 54 AMJAP_2694 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily AMJAP_2694 IPR007634 RNA polymerase sigma factor 54, DNA-binding AMJAP_2695 IPR036567 Ribosome hibernation promotion factor-like AMJAP_2695 IPR003489 Ribosome hibernation promoting factor/RaiA AMJAP_2696 IPR002178 PTS EIIA type-2 domain AMJAP_2696 IPR016152 Phosphotransferase/anion transporter AMJAP_2696 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN AMJAP_2697 IPR005337 RapZ-like family AMJAP_2697 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2698 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AMJAP_2698 IPR000032 Phosphocarrier protein HPr-like AMJAP_2698 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site AMJAP_2698 IPR035895 HPr-like superfamily AMJAP_2699 IPR038048 Magnesium transporter MgtE, transmembrane domain AMJAP_2699 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily AMJAP_2699 IPR006667 SLC41 divalent cation transporters, integral membrane domain AMJAP_2699 IPR038076 MgtE, N-terminal domain superfamily AMJAP_2699 IPR000644 CBS domain AMJAP_2699 IPR006668 Magnesium transporter, MgtE intracellular domain AMJAP_2699 IPR006669 Magnesium transporter MgtE AMJAP_2700 IPR023153 PSPTO4464-like domain superfamily AMJAP_2700 IPR006839 Ribosome-associated, YjgA AMJAP_2702 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2702 IPR003029 S1 domain AMJAP_2702 IPR022967 RNA-binding domain, S1 AMJAP_2702 IPR004659 Ribonuclease E/G AMJAP_2702 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G AMJAP_2703 IPR029001 Inosine triphosphate pyrophosphatase-like AMJAP_2703 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein AMJAP_2704 IPR007227 Cell shape-determining protein MreD AMJAP_2704 IPR026034 Cell shape-determining protein MreD, proteobacterial type AMJAP_2705 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 AMJAP_2705 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 AMJAP_2705 IPR007221 Rod shape-determining protein MreC AMJAP_2706 IPR004753 Cell shape determining protein MreB AMJAP_2707 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C AMJAP_2707 IPR003837 Glu-tRNAGln amidotransferase C subunit AMJAP_2708 IPR020556 Amidase, conserved site AMJAP_2708 IPR023631 Amidase signature domain AMJAP_2708 IPR036928 Amidase signature (AS) superfamily AMJAP_2708 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit AMJAP_2708 IPR000120 Amidase AMJAP_2709 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMJAP_2709 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E AMJAP_2709 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic AMJAP_2709 IPR018027 Asn/Gln amidotransferase AMJAP_2709 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like AMJAP_2709 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 AMJAP_2709 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 AMJAP_2709 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit AMJAP_2709 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site AMJAP_2710 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily AMJAP_2710 IPR002569 Peptide methionine sulphoxide reductase MsrA AMJAP_2711 IPR013785 Aldolase-type TIM barrel AMJAP_2711 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2711 IPR023753 FAD/NAD(P)-binding domain AMJAP_2711 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal AMJAP_2713 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AMJAP_2713 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase AMJAP_2718 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2718 IPR011129 Cold shock domain AMJAP_2718 IPR019844 Cold-shock (CSD) domain AMJAP_2718 IPR002059 Cold-shock protein, DNA-binding AMJAP_2718 IPR012156 Cold shock, CspA AMJAP_2719 IPR007236 SlyX AMJAP_2720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_2720 IPR007536 Ribosomal RNA small subunit methyltransferase J AMJAP_2721 IPR003824 Undecaprenyl-diphosphatase UppP AMJAP_2722 IPR000905 Gcp-like domain AMJAP_2722 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB AMJAP_2723 IPR004507 Flavin prenyltransferase UbiX-like AMJAP_2723 IPR003382 Flavoprotein AMJAP_2723 IPR036551 Flavin prenyltransferase-like AMJAP_2724 IPR013221 Mur ligase, central AMJAP_2724 IPR036615 Mur ligase, C-terminal domain superfamily AMJAP_2724 IPR004101 Mur ligase, C-terminal AMJAP_2724 IPR000713 Mur ligase, N-terminal catalytic domain AMJAP_2724 IPR005757 Murein peptide ligase AMJAP_2724 IPR036565 Mur-like, catalytic domain superfamily AMJAP_2725 IPR028343 Fructose-1,6-bisphosphatase AMJAP_2725 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal AMJAP_2725 IPR000146 Fructose-1,6-bisphosphatase class 1 AMJAP_2726 IPR008162 Inorganic pyrophosphatase AMJAP_2726 IPR036649 Inorganic pyrophosphatase superfamily AMJAP_2727 IPR008526 Inner membrane protein YedI AMJAP_2729 IPR029479 Nitroreductase AMJAP_2729 IPR000415 Nitroreductase-like AMJAP_2730 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2730 IPR005119 LysR, substrate-binding AMJAP_2730 IPR000847 Transcription regulator HTH, LysR AMJAP_2730 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2735 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMJAP_2735 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_2735 IPR013328 6-phosphogluconate dehydrogenase, domain 2 AMJAP_2735 IPR036291 NAD(P)-binding domain superfamily AMJAP_2735 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMJAP_2735 IPR022694 3-hydroxyacyl-CoA dehydrogenase AMJAP_2735 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMJAP_2736 IPR006043 Xanthine/uracil/vitamin C permease AMJAP_2736 IPR006042 Xanthine/uracil permease AMJAP_2736 IPR029935 Uracil permease AMJAP_2737 IPR029057 Phosphoribosyltransferase-like AMJAP_2737 IPR034332 Uracil phosphoribosyltransferase, bacterial-type AMJAP_2737 IPR005765 Uracil phosphoribosyl transferase AMJAP_2737 IPR000836 Phosphoribosyltransferase domain AMJAP_2738 IPR005971 Light-independent protochlorophyllide reductase, iron-sulphur ATP-binding protein AMJAP_2738 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2738 IPR030655 NifH/chlL conserved site AMJAP_2738 IPR000392 NifH/frxC family AMJAP_2740 IPR001874 Dehydroquinase, class II AMJAP_2740 IPR036441 Dehydroquinase, class II superfamily AMJAP_2740 IPR018509 Dehydroquinase, class II, conserved site AMJAP_2741 IPR001249 Acetyl-CoA biotin carboxyl carrier AMJAP_2741 IPR001882 Biotin-binding site AMJAP_2741 IPR011053 Single hybrid motif AMJAP_2741 IPR000089 Biotin/lipoyl attachment AMJAP_2742 IPR016185 Pre-ATP-grasp domain superfamily AMJAP_2742 IPR011054 Rudiment single hybrid motif AMJAP_2742 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMJAP_2742 IPR011761 ATP-grasp fold AMJAP_2742 IPR013815 ATP-grasp fold, subdomain 1 AMJAP_2742 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase AMJAP_2742 IPR005482 Biotin carboxylase, C-terminal AMJAP_2742 IPR011764 Biotin carboxylation domain AMJAP_2742 IPR005481 Biotin carboxylase-like, N-terminal domain AMJAP_2743 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_2743 IPR004498 Ribosomal protein L11 methyltransferase AMJAP_2745 IPR018517 tRNA-dihydrouridine synthase, conserved site AMJAP_2745 IPR001269 tRNA-dihydrouridine synthase AMJAP_2745 IPR013785 Aldolase-type TIM barrel AMJAP_2745 IPR035587 DUS-like, FMN-binding domain AMJAP_2745 IPR032887 tRNA-dihydrouridine synthase B AMJAP_2745 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal AMJAP_2745 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 AMJAP_2746 IPR005412 DNA-binding protein Fis AMJAP_2746 IPR009057 Homeobox-like domain superfamily AMJAP_2746 IPR002197 DNA binding HTH domain, Fis-type AMJAP_2747 IPR036914 Methylglyoxal synthase-like domain superfamily AMJAP_2747 IPR011607 Methylglyoxal synthase-like domain AMJAP_2747 IPR016193 Cytidine deaminase-like AMJAP_2747 IPR002695 Bifunctional purine biosynthesis protein PurH-like AMJAP_2747 IPR024051 AICAR transformylase, duplicated domain superfamily AMJAP_2748 IPR013815 ATP-grasp fold, subdomain 1 AMJAP_2748 IPR011761 ATP-grasp fold AMJAP_2748 IPR016185 Pre-ATP-grasp domain superfamily AMJAP_2748 IPR000115 Phosphoribosylglycinamide synthetase AMJAP_2748 IPR011054 Rudiment single hybrid motif AMJAP_2748 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal AMJAP_2748 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AMJAP_2748 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily AMJAP_2748 IPR020560 Phosphoribosylglycinamide synthetase, C-domain AMJAP_2748 IPR020559 Phosphoribosylglycinamide synthetase, conserved site AMJAP_2751 IPR036291 NAD(P)-binding domain superfamily AMJAP_2751 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase AMJAP_2751 IPR033524 Leu/Phe/Val dehydrogenases active site AMJAP_2751 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal AMJAP_2751 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain AMJAP_2751 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal AMJAP_2752 IPR001017 Dehydrogenase, E1 component AMJAP_2752 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha AMJAP_2752 IPR029061 Thiamin diphosphate-binding fold AMJAP_2753 IPR029061 Thiamin diphosphate-binding fold AMJAP_2753 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II AMJAP_2753 IPR033248 Transketolase, C-terminal domain AMJAP_2753 IPR005475 Transketolase-like, pyrimidine-binding domain AMJAP_2754 IPR036625 E3-binding domain superfamily AMJAP_2754 IPR004167 Peripheral subunit-binding domain AMJAP_2754 IPR011053 Single hybrid motif AMJAP_2754 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMJAP_2754 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain AMJAP_2754 IPR000089 Biotin/lipoyl attachment AMJAP_2754 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily AMJAP_2755 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2755 IPR013153 PrkA AAA domain AMJAP_2755 IPR010650 PrkA C-terminal domain AMJAP_2755 IPR016230 Serine-protein kinase, PrkA AMJAP_2756 IPR006698 Uncharacterised protein family UPF0229 AMJAP_2757 IPR007390 Sporulation stage V, protein R AMJAP_2758 IPR001310 Histidine triad (HIT) protein AMJAP_2758 IPR011146 HIT-like domain AMJAP_2758 IPR036265 HIT-like superfamily AMJAP_2758 IPR019808 Histidine triad, conserved site AMJAP_2760 IPR002505 Phosphate acetyl/butaryl transferase AMJAP_2760 IPR012147 Phosphate acetyl/butyryltransferase AMJAP_2761 IPR023865 Aliphatic acid kinase, short-chain, conserved site AMJAP_2761 IPR004372 Acetate/propionate kinase AMJAP_2761 IPR000890 Aliphatic acid kinase, short-chain AMJAP_2763 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMJAP_2763 IPR001036 Acriflavin resistance protein AMJAP_2766 IPR004624 PhnA protein AMJAP_2766 IPR013988 PhnA protein, C-terminal AMJAP_2766 IPR013987 PhnA protein, N-terminal AMJAP_2768 IPR004441 RNA methyltransferase TrmH family AMJAP_2768 IPR013123 RNA 2-O ribose methyltransferase, substrate binding AMJAP_2768 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMJAP_2768 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB AMJAP_2768 IPR029064 50S ribosomal protein L30e-like AMJAP_2768 IPR029028 Alpha/beta knot methyltransferases AMJAP_2768 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMJAP_2769 IPR033644 Ferrochelatase, C-terminal AMJAP_2769 IPR033659 Ferrochelatase, N-terminal AMJAP_2769 IPR019772 Ferrochelatase, active site AMJAP_2769 IPR001015 Ferrochelatase AMJAP_2770 IPR007862 Adenylate kinase, active site lid domain AMJAP_2770 IPR033690 Adenylate kinase, conserved site AMJAP_2770 IPR006259 Adenylate kinase subfamily AMJAP_2770 IPR000850 Adenylate kinase/UMP-CMP kinase AMJAP_2770 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2771 IPR033129 Phosphoenolpyruvate carboxylase, His active site AMJAP_2771 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type AMJAP_2771 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMJAP_2771 IPR021135 Phosphoenolpyruvate carboxylase AMJAP_2771 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site AMJAP_2773 IPR011551 NTP pyrophosphohydrolase MazG AMJAP_2773 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMJAP_2774 IPR004811 RelA/SpoT family AMJAP_2774 IPR033655 RelA, TGS domain AMJAP_2774 IPR012675 Beta-grasp domain superfamily AMJAP_2774 IPR002912 ACT domain AMJAP_2774 IPR003607 HD/PDEase domain AMJAP_2774 IPR007685 RelA/SpoT AMJAP_2774 IPR004095 TGS AMJAP_2774 IPR012676 TGS-like AMJAP_2775 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMJAP_2775 IPR001926 Pyridoxal-phosphate dependent enzyme AMJAP_2775 IPR005856 Cysteine synthase AMJAP_2775 IPR005858 Cysteine synthase CysM AMJAP_2775 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site AMJAP_2777 IPR008278 4'-phosphopantetheinyl transferase domain AMJAP_2777 IPR004568 Phosphopantetheine-protein transferase domain AMJAP_2777 IPR002582 Holo-[acyl carrier protein] synthase AMJAP_2777 IPR037143 4'-phosphopantetheinyl transferase domain superfamily AMJAP_2778 IPR013785 Aldolase-type TIM barrel AMJAP_2778 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ AMJAP_2778 IPR036130 Pyridoxine 5'-phosphate synthase AMJAP_2779 IPR003717 Recombination protein O, RecO AMJAP_2779 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2779 IPR022572 DNA replication/recombination mediator RecO, N-terminal AMJAP_2779 IPR037278 ARFGAP/RecO-like zinc finger AMJAP_2780 IPR005225 Small GTP-binding protein domain AMJAP_2780 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2780 IPR006073 GTP binding domain AMJAP_2780 IPR015946 K homology domain-like, alpha/beta AMJAP_2780 IPR005662 GTP-binding protein Era AMJAP_2780 IPR030388 Era-type guanine nucleotide-binding (G) domain AMJAP_2780 IPR004044 K Homology domain, type 2 AMJAP_2780 IPR009019 K homology domain superfamily, prokaryotic type AMJAP_2781 IPR036389 Ribonuclease III, endonuclease domain superfamily AMJAP_2781 IPR000999 Ribonuclease III domain AMJAP_2781 IPR011907 Ribonuclease III AMJAP_2781 IPR014720 Double-stranded RNA-binding domain AMJAP_2783 IPR019533 Peptidase S26 AMJAP_2783 IPR019756 Peptidase S26A, signal peptidase I, serine active site AMJAP_2783 IPR019758 Peptidase S26A, signal peptidase I, conserved site AMJAP_2783 IPR019757 Peptidase S26A, signal peptidase I, lysine active site AMJAP_2783 IPR000223 Peptidase S26A, signal peptidase I AMJAP_2783 IPR036286 LexA/Signal peptidase-like superfamily AMJAP_2784 IPR005225 Small GTP-binding protein domain AMJAP_2784 IPR006297 Elongation factor 4 AMJAP_2784 IPR000795 Transcription factor, GTP-binding domain AMJAP_2784 IPR031157 Tr-type G domain, conserved site AMJAP_2784 IPR004161 Translation elongation factor EFTu-like, domain 2 AMJAP_2784 IPR038363 LepA, C-terminal domain superfamily AMJAP_2784 IPR013842 GTP-binding protein LepA, C-terminal AMJAP_2784 IPR035654 Elongation factor 4, domain IV AMJAP_2784 IPR035647 EF-G domain III/V-like AMJAP_2784 IPR000640 Elongation factor EFG, domain V-like AMJAP_2784 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2784 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_2785 IPR036034 PDZ superfamily AMJAP_2785 IPR001478 PDZ domain AMJAP_2785 IPR011782 Peptidase S1C, Do AMJAP_2785 IPR009003 Peptidase S1, PA clan AMJAP_2785 IPR001940 Peptidase S1C AMJAP_2787 IPR005572 Anti sigma-E protein RseA, N-terminal AMJAP_2787 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily AMJAP_2787 IPR005573 Anti sigma-E protein RseA, C-terminal AMJAP_2788 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site AMJAP_2788 IPR013325 RNA polymerase sigma factor, region 2 AMJAP_2788 IPR039425 RNA polymerase sigma-70 like AMJAP_2788 IPR013324 RNA polymerase sigma factor, region 3/4-like AMJAP_2788 IPR014286 RNA polymerase sigma-70 RpoE type AMJAP_2788 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2788 IPR014284 RNA polymerase sigma-70 like domain AMJAP_2788 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 AMJAP_2788 IPR007627 RNA polymerase sigma-70 region 2 AMJAP_2789 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMJAP_2789 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_2789 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily AMJAP_2789 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal AMJAP_2789 IPR005288 L-aspartate oxidase AMJAP_2789 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily AMJAP_2791 IPR005631 Flavinator of succinate dehydrogenase AMJAP_2791 IPR036714 Flavinator of succinate dehydrogenase superfamily AMJAP_2792 IPR016484 GTP-binding protein EngA AMJAP_2792 IPR006073 GTP binding domain AMJAP_2792 IPR003593 AAA+ ATPase domain AMJAP_2792 IPR031166 EngA-type guanine nucleotide-binding (G) domain AMJAP_2792 IPR015946 K homology domain-like, alpha/beta AMJAP_2792 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2792 IPR005225 Small GTP-binding protein domain AMJAP_2792 IPR032859 GTPase Der, C-terminal KH-domain-like AMJAP_2793 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AMJAP_2793 IPR015943 WD40/YVTN repeat-like-containing domain superfamily AMJAP_2793 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMJAP_2793 IPR002372 Pyrrolo-quinoline quinone repeat AMJAP_2793 IPR017687 Outer membrane protein assembly factor BamB AMJAP_2794 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_2794 IPR026039 Uncharacterised protein family UPF0070 AMJAP_2794 IPR018704 Tetratricopeptide repeat-like domain AMJAP_2795 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain AMJAP_2795 IPR015807 Histidine-tRNA ligase AMJAP_2795 IPR036621 Anticodon-binding domain superfamily AMJAP_2795 IPR004154 Anticodon-binding AMJAP_2795 IPR006195 Aminoacyl-tRNA synthetase, class II AMJAP_2795 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AMJAP_2798 IPR006638 Elp3/MiaB/NifB AMJAP_2798 IPR040072 Methyltransferase (Class A) AMJAP_2798 IPR027492 Dual-specificity RNA methyltransferase RlmN AMJAP_2798 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr AMJAP_2798 IPR013785 Aldolase-type TIM barrel AMJAP_2798 IPR007197 Radical SAM AMJAP_2799 IPR001564 Nucleoside diphosphate kinase AMJAP_2799 IPR036850 Nucleoside diphosphate kinase-like domain superfamily AMJAP_2799 IPR034907 Nucleoside diphosphate kinase-like domain AMJAP_2799 IPR023005 Nucleoside diphosphate kinase, active site AMJAP_2800 IPR036762 IscX-like superfamily AMJAP_2800 IPR007479 ISC system FeS cluster assembly, IscX AMJAP_2801 IPR001055 Adrenodoxin AMJAP_2801 IPR036010 2Fe-2S ferredoxin-like superfamily AMJAP_2801 IPR018298 Adrenodoxin, iron-sulphur binding site AMJAP_2801 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria AMJAP_2801 IPR012675 Beta-grasp domain superfamily AMJAP_2801 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMJAP_2802 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily AMJAP_2802 IPR042039 HscA chaperone, nucleotide-binding domain AMJAP_2802 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily AMJAP_2802 IPR018181 Heat shock protein 70, conserved site AMJAP_2802 IPR013126 Heat shock protein 70 family AMJAP_2802 IPR010236 ISC system FeS cluster assembly, HscA chaperone AMJAP_2803 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain AMJAP_2803 IPR001623 DnaJ domain AMJAP_2803 IPR004640 Co-chaperone Hsc20 AMJAP_2803 IPR036386 HscB, C-terminal domain superfamily AMJAP_2803 IPR036869 Chaperone J-domain superfamily AMJAP_2804 IPR016092 FeS cluster insertion protein AMJAP_2804 IPR000361 FeS cluster biogenesis AMJAP_2804 IPR017870 FeS cluster insertion, C-terminal, conserved site AMJAP_2804 IPR011302 Iron-binding protein IscA, proteobacteria AMJAP_2804 IPR035903 HesB-like domain superfamily AMJAP_2805 IPR011339 ISC system FeS cluster assembly, IscU scaffold AMJAP_2805 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal AMJAP_2806 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2806 IPR016454 Cysteine desulfurase AMJAP_2806 IPR010240 Cysteine desulfurase IscS AMJAP_2806 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMJAP_2806 IPR000192 Aminotransferase class V domain AMJAP_2806 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2806 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2807 IPR010242 Transcription factor HTH, IscR AMJAP_2807 IPR000944 Transcription regulator Rrf2-type AMJAP_2807 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2807 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2807 IPR030489 Transcription regulator Rrf2-type, conserved site AMJAP_2808 IPR029028 Alpha/beta knot methyltransferases AMJAP_2808 IPR004384 RNA methyltransferase TrmJ/LasT AMJAP_2808 IPR001537 tRNA/rRNA methyltransferase, SpoU type AMJAP_2808 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMJAP_2809 IPR033942 Inositol monophosphatase AMJAP_2809 IPR022337 Inositol monophosphatase, SuhB AMJAP_2809 IPR020550 Inositol monophosphatase, conserved site AMJAP_2809 IPR000760 Inositol monophosphatase-like AMJAP_2809 IPR020583 Inositol monophosphatase, metal-binding site AMJAP_2810 IPR042111 Adenylosuccinate synthetase, domain 3 AMJAP_2810 IPR042110 Adenylosuccinate synthetase, domain 2 AMJAP_2810 IPR042109 Adenylosuccinate synthetase, domain 1 AMJAP_2810 IPR033128 Adenylosuccinate synthase, active site AMJAP_2810 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2810 IPR001114 Adenylosuccinate synthetase AMJAP_2810 IPR018220 Adenylosuccinate synthase, GTP-binding site AMJAP_2811 IPR004517 ATP phosphoribosyltransferase regulatory subunit AMJAP_2811 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit AMJAP_2811 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain AMJAP_2813 IPR001107 Band 7 domain AMJAP_2813 IPR036013 Band 7/SPFH domain superfamily AMJAP_2813 IPR010200 HflC AMJAP_2814 IPR001972 Stomatin family AMJAP_2814 IPR036013 Band 7/SPFH domain superfamily AMJAP_2814 IPR010201 HflK AMJAP_2814 IPR020980 Menbrane protein HflK, N-terminal AMJAP_2814 IPR001107 Band 7 domain AMJAP_2815 IPR030394 HflX-type guanine nucleotide-binding (G) domain AMJAP_2815 IPR042108 GTPase HflX, N-terminal domain superfamily AMJAP_2815 IPR025121 GTPase HflX, N-terminal AMJAP_2815 IPR016496 GTPase HflX AMJAP_2815 IPR006073 GTP binding domain AMJAP_2815 IPR032305 GTP-binding protein, middle domain AMJAP_2815 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2815 IPR035647 EF-G domain III/V-like AMJAP_2816 IPR010920 LSM domain superfamily AMJAP_2816 IPR005001 RNA-binding protein Hfq AMJAP_2817 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2817 IPR018022 IPP transferase AMJAP_2817 IPR039657 Dimethylallyltransferase AMJAP_2818 IPR037198 MutL, C-terminal domain superfamily AMJAP_2818 IPR014790 MutL, C-terminal, dimerisation AMJAP_2818 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_2818 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_2818 IPR042120 MutL, C-terminal domain, dimerisation subdomain AMJAP_2818 IPR013507 DNA mismatch repair protein, S5 domain 2-like AMJAP_2818 IPR002099 DNA mismatch repair protein family, N-terminal AMJAP_2818 IPR020667 DNA mismatch repair protein, MutL AMJAP_2818 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_2818 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms AMJAP_2818 IPR042121 MutL, C-terminal domain, regulatory subdomain AMJAP_2818 IPR014762 DNA mismatch repair, conserved site AMJAP_2819 IPR021731 AMIN domain AMJAP_2819 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain AMJAP_2819 IPR006311 Twin-arginine translocation pathway, signal sequence AMJAP_2820 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2820 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE AMJAP_2821 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase AMJAP_2821 IPR004443 YjeF N-terminal domain AMJAP_2821 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr AMJAP_2821 IPR029056 Ribokinase-like AMJAP_2821 IPR036652 YjeF N-terminal domain superfamily AMJAP_2822 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_2822 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_2822 IPR004453 Epoxyqueuosine reductase QueG AMJAP_2822 IPR013542 Domain of unknown function DUF1730 AMJAP_2823 IPR000014 PAS domain AMJAP_2823 IPR013656 PAS fold-4 AMJAP_2823 IPR000160 GGDEF domain AMJAP_2823 IPR035919 EAL domain superfamily AMJAP_2823 IPR029787 Nucleotide cyclase AMJAP_2823 IPR035965 PAS domain superfamily AMJAP_2823 IPR001633 EAL domain AMJAP_2824 IPR022894 Oligoribonuclease AMJAP_2824 IPR013520 Exonuclease, RNase T/DNA polymerase III AMJAP_2824 IPR036397 Ribonuclease H superfamily AMJAP_2824 IPR012337 Ribonuclease H-like superfamily AMJAP_2825 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2825 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain AMJAP_2825 IPR010914 RsgA GTPase domain AMJAP_2825 IPR004881 Ribosome biogenesis GTPase RsgA AMJAP_2827 IPR001307 Thiosulphate sulfurtransferase, conserved site AMJAP_2827 IPR001763 Rhodanese-like domain AMJAP_2827 IPR036873 Rhodanese-like domain superfamily AMJAP_2828 IPR033177 Phosphatidylserine decarboxylase AMJAP_2828 IPR003817 Phosphatidylserine decarboxylase-related AMJAP_2828 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 AMJAP_2829 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMJAP_2829 IPR023758 tRNA-modifying protein YgfZ AMJAP_2829 IPR017703 YgfZ/GcvT conserved site AMJAP_2830 IPR001059 Translation elongation factor P/YeiP, central AMJAP_2830 IPR020599 Translation elongation factor P/YeiP AMJAP_2830 IPR014722 Ribosomal protein L2, domain 2 AMJAP_2830 IPR013852 Translation elongation factor P/YeiP, conserved site AMJAP_2830 IPR013185 Translation elongation factor, KOW-like AMJAP_2830 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2830 IPR015365 Elongation factor P, C-terminal AMJAP_2830 IPR008991 Translation protein SH3-like domain superfamily AMJAP_2830 IPR011897 Translation elongation factor P-like, YeiP AMJAP_2832 IPR002043 Uracil-DNA glycosylase family 1 AMJAP_2832 IPR036895 Uracil-DNA glycosylase-like domain superfamily AMJAP_2832 IPR005122 Uracil-DNA glycosylase-like AMJAP_2832 IPR018085 Uracil-DNA glycosylase, active site AMJAP_2834 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type AMJAP_2834 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2834 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal AMJAP_2834 IPR002313 Lysine-tRNA ligase, class II AMJAP_2834 IPR006195 Aminoacyl-tRNA synthetase, class II AMJAP_2834 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) AMJAP_2835 IPR004374 Peptide chain release factor 2 AMJAP_2835 IPR000352 Peptide chain release factor class I AMJAP_2835 IPR005139 Peptide chain release factor AMJAP_2836 IPR004680 Citrate transporter-like domain AMJAP_2837 IPR008254 Flavodoxin/nitric oxide synthase AMJAP_2837 IPR001226 Flavodoxin, conserved site AMJAP_2837 IPR010086 Flavodoxin, long chain AMJAP_2837 IPR029039 Flavoprotein-like superfamily AMJAP_2839 IPR004361 Glyoxalase I AMJAP_2839 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMJAP_2839 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMJAP_2839 IPR018146 Glyoxalase I, conserved site AMJAP_2839 IPR037523 Vicinal oxygen chelate (VOC) domain AMJAP_2841 IPR007272 Sulphur transport domain AMJAP_2843 IPR005495 Permease LptG/LptF-related AMJAP_2843 IPR030923 LPS export ABC transporter permease LptG AMJAP_2844 IPR030922 LPS export ABC transporter permease LptF AMJAP_2844 IPR005495 Permease LptG/LptF-related AMJAP_2845 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal AMJAP_2845 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal AMJAP_2845 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B AMJAP_2845 IPR023042 Peptidase M17, leucine aminopeptidase AMJAP_2846 IPR007459 DNA polymerase III chi subunit, HolC AMJAP_2846 IPR036768 DNA polymerase III subunit chi superfamily AMJAP_2848 IPR002303 Valine-tRNA ligase AMJAP_2848 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AMJAP_2848 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMJAP_2848 IPR033705 Valyl tRNA synthetase, anticodon-binding domain AMJAP_2848 IPR002300 Aminoacyl-tRNA synthetase, class Ia AMJAP_2848 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AMJAP_2848 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_2848 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm AMJAP_2848 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMJAP_2848 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm AMJAP_2848 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily AMJAP_2854 IPR008249 Uncharacterised protein family UPF0231 AMJAP_2856 IPR005330 MHYT domain AMJAP_2856 IPR035919 EAL domain superfamily AMJAP_2856 IPR001633 EAL domain AMJAP_2856 IPR029787 Nucleotide cyclase AMJAP_2856 IPR000160 GGDEF domain AMJAP_2856 IPR035965 PAS domain superfamily AMJAP_2857 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2857 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2857 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2857 IPR004839 Aminotransferase, class I/classII AMJAP_2857 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2857 IPR000524 Transcription regulator HTH, GntR AMJAP_2857 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2858 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG AMJAP_2858 IPR013783 Immunoglobulin-like fold AMJAP_2858 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMJAP_2858 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMJAP_2858 IPR032879 FixG, C-terminal immunoglobulin-like domain AMJAP_2861 IPR018080 Band 7/stomatin-like, conserved site AMJAP_2861 IPR001972 Stomatin family AMJAP_2861 IPR032435 Band 7, C-terminal extension AMJAP_2861 IPR001107 Band 7 domain AMJAP_2861 IPR036013 Band 7/SPFH domain superfamily AMJAP_2863 IPR009057 Homeobox-like domain superfamily AMJAP_2863 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily AMJAP_2863 IPR001647 DNA-binding HTH domain, TetR-type AMJAP_2865 IPR011006 CheY-like superfamily AMJAP_2865 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2865 IPR029787 Nucleotide cyclase AMJAP_2865 IPR000160 GGDEF domain AMJAP_2870 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMJAP_2871 IPR029058 Alpha/Beta hydrolase fold AMJAP_2871 IPR003140 Phospholipase/carboxylesterase/thioesterase AMJAP_2872 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal AMJAP_2872 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative AMJAP_2872 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site AMJAP_2872 IPR012349 FMN-binding split barrel AMJAP_2872 IPR000659 Pyridoxamine 5'-phosphate oxidase AMJAP_2873 IPR016477 Fructosamine/Ketosamine-3-kinase AMJAP_2873 IPR011009 Protein kinase-like domain superfamily AMJAP_2874 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type AMJAP_2874 IPR007498 Intermembrane transport protein PqiA-like AMJAP_2875 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type AMJAP_2875 IPR007498 Intermembrane transport protein PqiA-like AMJAP_2876 IPR003399 Mce/MlaD AMJAP_2879 IPR006083 Phosphoribulokinase/uridine kinase AMJAP_2879 IPR000764 Uridine kinase-like AMJAP_2879 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2879 IPR026008 Uridine kinase AMJAP_2881 IPR006143 RND efflux pump, membrane fusion protein AMJAP_2881 IPR022824 Multidrug resistance protein MdtA AMJAP_2881 IPR039562 Membrane fusion protein, biotin-lipoyl like domain AMJAP_2882 IPR023931 Multidrug resistance protein MdtC AMJAP_2882 IPR001036 Acriflavin resistance protein AMJAP_2882 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMJAP_2884 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_2884 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_2884 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_2884 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 AMJAP_2884 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AMJAP_2884 IPR004839 Aminotransferase, class I/classII AMJAP_2884 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type AMJAP_2885 IPR006504 Transcriptional regulator Spx/MgsR AMJAP_2885 IPR036249 Thioredoxin-like superfamily AMJAP_2885 IPR006660 Arsenate reductase-like AMJAP_2886 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria AMJAP_2886 IPR001451 Hexapeptide repeat AMJAP_2886 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain AMJAP_2886 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily AMJAP_2886 IPR011004 Trimeric LpxA-like superfamily AMJAP_2886 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family AMJAP_2887 IPR011650 Peptidase M20, dimerisation domain AMJAP_2887 IPR002933 Peptidase M20 AMJAP_2887 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria AMJAP_2887 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site AMJAP_2887 IPR036264 Bacterial exopeptidase dimerisation domain AMJAP_2888 IPR025714 Methyltransferase domain AMJAP_2888 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_2888 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted AMJAP_2892 IPR005119 LysR, substrate-binding AMJAP_2892 IPR000847 Transcription regulator HTH, LysR AMJAP_2892 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2892 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2893 IPR018383 Uncharacterised protein family UPF0324, prokaryote AMJAP_2893 IPR004630 Uncharacterised protein family UPF0324, bacteria AMJAP_2894 IPR028624 Transcription elongation factor GreA/GreB AMJAP_2894 IPR006358 Transcription elongation factor GreB AMJAP_2894 IPR023459 Transcription elongation factor GreA/GreB family AMJAP_2894 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AMJAP_2894 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AMJAP_2894 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily AMJAP_2894 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AMJAP_2894 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AMJAP_2895 IPR018060 DNA binding HTH domain, AraC-type AMJAP_2895 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal AMJAP_2895 IPR009057 Homeobox-like domain superfamily AMJAP_2895 IPR020449 Transcription regulator HTH, AraC- type AMJAP_2897 IPR010752 Protein of unknown function DUF1329 AMJAP_2899 IPR030374 Polyamine biosynthesis domain AMJAP_2899 IPR001045 Spermidine/spermine synthases AMJAP_2899 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_2900 IPR003815 S-ribosylhomocysteinase (LuxS) AMJAP_2900 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily AMJAP_2900 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like AMJAP_2902 IPR008523 Protein of unknown function DUF805 AMJAP_2906 IPR036676 PurM-like, C-terminal domain superfamily AMJAP_2906 IPR016188 PurM-like, N-terminal domain AMJAP_2906 IPR036921 PurM-like, N-terminal domain superfamily AMJAP_2906 IPR023061 Selenophosphate synthetase, class I AMJAP_2906 IPR004536 Selenophosphate synthetase AMJAP_2906 IPR010918 PurM-like, C-terminal domain AMJAP_2908 IPR011057 Mss4-like superfamily AMJAP_2908 IPR002579 Peptide methionine sulphoxide reductase MrsB AMJAP_2908 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily AMJAP_2908 IPR002569 Peptide methionine sulphoxide reductase MsrA AMJAP_2908 IPR028427 Peptide methionine sulfoxide reductase AMJAP_2911 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria AMJAP_2911 IPR007431 Acyl carrier protein phosphodiesterase AMJAP_2912 IPR012805 Acetyl-CoA C-acyltransferase FadA AMJAP_2912 IPR002155 Thiolase AMJAP_2912 IPR016039 Thiolase-like AMJAP_2912 IPR020615 Thiolase, acyl-enzyme intermediate active site AMJAP_2912 IPR020610 Thiolase, active site AMJAP_2912 IPR020617 Thiolase, C-terminal AMJAP_2912 IPR020616 Thiolase, N-terminal AMJAP_2912 IPR020613 Thiolase, conserved site AMJAP_2913 IPR012799 Fatty oxidation complex, alpha subunit FadB AMJAP_2913 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_2913 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_2913 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMJAP_2913 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site AMJAP_2913 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily AMJAP_2913 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal AMJAP_2913 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding AMJAP_2913 IPR036291 NAD(P)-binding domain superfamily AMJAP_2914 IPR002123 Phospholipid/glycerol acyltransferase AMJAP_2914 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase AMJAP_2915 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_2915 IPR014748 Enoyl-CoA hydratase, C-terminal AMJAP_2915 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMJAP_2915 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_2917 IPR042099 AMP-dependent synthetase-like superfamily AMJAP_2917 IPR000873 AMP-dependent synthetase/ligase AMJAP_2917 IPR020845 AMP-binding, conserved site AMJAP_2917 IPR025110 AMP-binding enzyme, C-terminal domain AMJAP_2919 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal AMJAP_2919 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain AMJAP_2919 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal AMJAP_2919 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily AMJAP_2919 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily AMJAP_2919 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal AMJAP_2919 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain AMJAP_2923 IPR028082 Periplasmic binding protein-like I AMJAP_2923 IPR028081 Leucine-binding protein domain AMJAP_2923 IPR000709 Leu/Ile/Val-binding protein AMJAP_2924 IPR001851 ABC transporter, permease AMJAP_2925 IPR001851 ABC transporter, permease AMJAP_2925 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal AMJAP_2926 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMJAP_2926 IPR017871 ABC transporter, conserved site AMJAP_2926 IPR003593 AAA+ ATPase domain AMJAP_2926 IPR003439 ABC transporter-like AMJAP_2926 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2927 IPR003593 AAA+ ATPase domain AMJAP_2927 IPR003439 ABC transporter-like AMJAP_2927 IPR017871 ABC transporter, conserved site AMJAP_2927 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2927 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein AMJAP_2928 IPR003018 GAF domain AMJAP_2928 IPR009057 Homeobox-like domain superfamily AMJAP_2928 IPR029016 GAF-like domain superfamily AMJAP_2928 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2928 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_2928 IPR010113 Nif-specific regulatory protein AMJAP_2928 IPR002197 DNA binding HTH domain, Fis-type AMJAP_2928 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_2928 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_2928 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_2928 IPR003593 AAA+ ATPase domain AMJAP_2929 IPR037171 NagB/RpiA transferase-like AMJAP_2929 IPR004165 Coenzyme A transferase family I AMJAP_2929 IPR014388 3-oxoacid CoA-transferase AMJAP_2934 IPR006175 YjgF/YER057c/UK114 family AMJAP_2934 IPR035709 RutC family, YoaB-like AMJAP_2934 IPR035959 RutC-like superfamily AMJAP_2934 IPR019897 RidA, conserved site AMJAP_2935 IPR003781 CoA-binding AMJAP_2935 IPR036291 NAD(P)-binding domain superfamily AMJAP_2936 IPR000594 THIF-type NAD/FAD binding fold AMJAP_2936 IPR035985 Ubiquitin-activating enzyme AMJAP_2936 IPR012730 Molybdopterin synthase sulfurylase MoeB AMJAP_2937 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_2937 IPR040758 Release factor glutamine methyltransferase, N-terminal domain AMJAP_2937 IPR025714 Methyltransferase domain AMJAP_2937 IPR004556 Methyltransferase HemK-like AMJAP_2937 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMJAP_2937 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific AMJAP_2938 IPR004373 Peptide chain release factor 1 AMJAP_2938 IPR000352 Peptide chain release factor class I AMJAP_2938 IPR005139 Peptide chain release factor AMJAP_2939 IPR036291 NAD(P)-binding domain superfamily AMJAP_2939 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily AMJAP_2939 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase AMJAP_2939 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal AMJAP_2939 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain AMJAP_2939 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase AMJAP_2939 IPR018214 Glutamyl-tRNA reductase, conserved site AMJAP_2939 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily AMJAP_2940 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_2940 IPR013026 Tetratricopeptide repeat-containing domain AMJAP_2940 IPR019734 Tetratricopeptide repeat AMJAP_2941 IPR004565 Outer membrane lipoprotein LolB AMJAP_2941 IPR029046 Lipoprotein localisation LolA/LolB/LppX AMJAP_2942 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site AMJAP_2942 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain AMJAP_2942 IPR000836 Phosphoribosyltransferase domain AMJAP_2942 IPR029057 Phosphoribosyltransferase-like AMJAP_2942 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type AMJAP_2942 IPR005946 Ribose-phosphate pyrophosphokinase AMJAP_2943 IPR020057 Ribosomal protein L25, beta domain AMJAP_2943 IPR001021 Ribosomal protein L25, long-form AMJAP_2943 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal AMJAP_2943 IPR037121 Ribosomal protein L25, C-terminal AMJAP_2943 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily AMJAP_2943 IPR029751 Ribosomal protein L25 AMJAP_2944 IPR018171 Peptidyl-tRNA hydrolase, conserved site AMJAP_2944 IPR036416 Peptidyl-tRNA hydrolase superfamily AMJAP_2944 IPR001328 Peptidyl-tRNA hydrolase AMJAP_2945 IPR031167 OBG-type guanine nucleotide-binding (G) domain AMJAP_2945 IPR006073 GTP binding domain AMJAP_2945 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2945 IPR012675 Beta-grasp domain superfamily AMJAP_2945 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 AMJAP_2945 IPR004095 TGS AMJAP_2945 IPR013029 YchF, C-terminal domain AMJAP_2945 IPR041706 YchF, N-terminal AMJAP_2945 IPR012676 TGS-like AMJAP_2945 IPR023192 TGS-like domain superfamily AMJAP_2949 IPR023214 HAD superfamily AMJAP_2949 IPR002912 ACT domain AMJAP_2949 IPR023190 Phosphoserine phosphatase, domain 2 AMJAP_2949 IPR036412 HAD-like superfamily AMJAP_2950 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMJAP_2950 IPR006143 RND efflux pump, membrane fusion protein AMJAP_2951 IPR011115 SecA DEAD-like, N-terminal AMJAP_2951 IPR020937 SecA conserved site AMJAP_2951 IPR036670 SecA, preprotein cross-linking domain superfamily AMJAP_2951 IPR000185 Protein translocase subunit SecA AMJAP_2951 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2951 IPR014018 SecA motor DEAD AMJAP_2951 IPR011130 SecA, preprotein cross-linking domain AMJAP_2956 IPR003423 Outer membrane efflux protein AMJAP_2956 IPR010130 Type I secretion outer membrane protein, TolC AMJAP_2957 IPR012340 Nucleic acid-binding, OB-fold AMJAP_2957 IPR040476 RNase II/RNase R, cold shock domain AMJAP_2957 IPR001900 Ribonuclease II/R AMJAP_2957 IPR022966 Ribonuclease II/R, conserved site AMJAP_2957 IPR013223 Ribonuclease B, N-terminal OB domain AMJAP_2957 IPR004476 Ribonuclease II/ribonuclease R AMJAP_2957 IPR013668 Ribonuclease R winged-helix domain AMJAP_2957 IPR003029 S1 domain AMJAP_2957 IPR022967 RNA-binding domain, S1 AMJAP_2957 IPR011129 Cold shock domain AMJAP_2957 IPR011805 Ribonuclease R AMJAP_2958 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMJAP_2958 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMJAP_2958 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMJAP_2958 IPR005665 Protein-export membrane protein SecF, bacterial AMJAP_2959 IPR005791 Protein translocase subunit SecD AMJAP_2959 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMJAP_2959 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMJAP_2959 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMJAP_2959 IPR027398 SecD export protein N-terminal TM domain AMJAP_2960 IPR003849 Preprotein translocase YajC AMJAP_2961 IPR004803 tRNA-guanine transglycosylase AMJAP_2961 IPR036511 Queuine tRNA-ribosyltransferase-like AMJAP_2961 IPR002616 tRNA-guanine(15) transglycosylase-like AMJAP_2962 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA AMJAP_2962 IPR042119 QueA, domain 2 AMJAP_2962 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily AMJAP_2962 IPR042118 QueA, domain 1 AMJAP_2965 IPR020936 Uncharacterised protein family UPF0176 AMJAP_2965 IPR036873 Rhodanese-like domain superfamily AMJAP_2965 IPR001763 Rhodanese-like domain AMJAP_2965 IPR040503 UPF0176, acylphosphatase-like domain AMJAP_2966 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_2966 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_2966 IPR001789 Signal transduction response regulator, receiver domain AMJAP_2966 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2966 IPR011006 CheY-like superfamily AMJAP_2966 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_2967 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_2967 IPR035965 PAS domain superfamily AMJAP_2967 IPR000700 PAS-associated, C-terminal AMJAP_2967 IPR000014 PAS domain AMJAP_2967 IPR001610 PAC motif AMJAP_2967 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_2967 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_2967 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_2967 IPR005467 Histidine kinase domain AMJAP_2967 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_2967 IPR003660 HAMP domain AMJAP_2968 IPR036465 von Willebrand factor A-like domain superfamily AMJAP_2968 IPR002035 von Willebrand factor, type A AMJAP_2969 IPR005119 LysR, substrate-binding AMJAP_2969 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2969 IPR000847 Transcription regulator HTH, LysR AMJAP_2969 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2970 IPR017927 FAD-binding domain, ferredoxin reductase-type AMJAP_2970 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMJAP_2970 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMJAP_2970 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMJAP_2970 IPR017938 Riboflavin synthase-like beta-barrel AMJAP_2970 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase AMJAP_2970 IPR033892 Ferredoxin--NADP reductase, bacteria AMJAP_2971 IPR000160 GGDEF domain AMJAP_2971 IPR029787 Nucleotide cyclase AMJAP_2974 IPR003846 Protein adenylyltransferase SelO AMJAP_2977 IPR036237 Xylose isomerase-like superfamily AMJAP_2977 IPR007801 Uncharacterised protein family UPF0276 AMJAP_2980 IPR011852 TRAP transporter solute receptor, TAXI family AMJAP_2984 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site AMJAP_2984 IPR029045 ClpP/crotonase-like domain superfamily AMJAP_2984 IPR014748 Enoyl-CoA hydratase, C-terminal AMJAP_2984 IPR001753 Enoyl-CoA hydratase/isomerase AMJAP_2985 IPR003781 CoA-binding AMJAP_2985 IPR016102 Succinyl-CoA synthetase-like AMJAP_2985 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain AMJAP_2985 IPR036291 NAD(P)-binding domain superfamily AMJAP_2985 IPR013815 ATP-grasp fold, subdomain 1 AMJAP_2985 IPR011761 ATP-grasp fold AMJAP_2987 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_2987 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_2987 IPR000847 Transcription regulator HTH, LysR AMJAP_2987 IPR005119 LysR, substrate-binding AMJAP_2988 IPR010523 Activator of aromatic catabolism AMJAP_2988 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_2988 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_2988 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_2988 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_2988 IPR004096 4-vinyl reductase, 4VR AMJAP_2988 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily AMJAP_2988 IPR002197 DNA binding HTH domain, Fis-type AMJAP_2988 IPR003593 AAA+ ATPase domain AMJAP_2988 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_2988 IPR009057 Homeobox-like domain superfamily AMJAP_2989 IPR036661 Luciferase-like domain superfamily AMJAP_2989 IPR011251 Luciferase-like domain AMJAP_2989 IPR019949 Luciferase family oxidoreductase, group 1 AMJAP_2994 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type AMJAP_2994 IPR004370 4-oxalocrotonate tautomerase AMJAP_2994 IPR014347 Tautomerase/MIF superfamily AMJAP_2996 IPR017630 4-oxalocrotonate decarboxylase AMJAP_2996 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMJAP_2997 IPR000891 Pyruvate carboxyltransferase AMJAP_2997 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain AMJAP_2997 IPR012425 DmpG-like communication AMJAP_2997 IPR013785 Aldolase-type TIM barrel AMJAP_2997 IPR017629 4-hydroxy-2-oxovalerate aldolase AMJAP_2998 IPR000534 Semialdehyde dehydrogenase, NAD-binding AMJAP_2998 IPR036291 NAD(P)-binding domain superfamily AMJAP_2998 IPR015426 Acetaldehyde dehydrogenase, C-terminal AMJAP_2998 IPR003361 Acetaldehyde dehydrogenase AMJAP_2999 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily AMJAP_3000 IPR015590 Aldehyde dehydrogenase domain AMJAP_3000 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase AMJAP_3000 IPR016163 Aldehyde dehydrogenase, C-terminal AMJAP_3000 IPR016161 Aldehyde/histidinol dehydrogenase AMJAP_3000 IPR016160 Aldehyde dehydrogenase, cysteine active site AMJAP_3000 IPR029510 Aldehyde dehydrogenase, glutamic acid active site AMJAP_3000 IPR016162 Aldehyde dehydrogenase, N-terminal AMJAP_3001 IPR037523 Vicinal oxygen chelate (VOC) domain AMJAP_3001 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMJAP_3001 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMJAP_3001 IPR017624 Catechol 2,3 dioxygenase AMJAP_3001 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II AMJAP_3002 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMJAP_3002 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMJAP_3002 IPR012675 Beta-grasp domain superfamily AMJAP_3002 IPR036010 2Fe-2S ferredoxin-like superfamily AMJAP_3003 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B AMJAP_3003 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type AMJAP_3004 IPR004045 Glutathione S-transferase, N-terminal AMJAP_3004 IPR010987 Glutathione S-transferase, C-terminal-like AMJAP_3004 IPR040079 Glutathione Transferase family AMJAP_3004 IPR036249 Thioredoxin-like superfamily AMJAP_3004 IPR016639 Glutathione S-transferase Omega/GSH AMJAP_3004 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AMJAP_3005 IPR000847 Transcription regulator HTH, LysR AMJAP_3005 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_3005 IPR005119 LysR, substrate-binding AMJAP_3005 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_3006 IPR017938 Riboflavin synthase-like beta-barrel AMJAP_3006 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMJAP_3006 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain AMJAP_3006 IPR036010 2Fe-2S ferredoxin-like superfamily AMJAP_3006 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMJAP_3006 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site AMJAP_3006 IPR017927 FAD-binding domain, ferredoxin reductase-type AMJAP_3006 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain AMJAP_3006 IPR012675 Beta-grasp domain superfamily AMJAP_3007 IPR006756 Phenol hydroxylase AMJAP_3008 IPR012348 Ribonucleotide reductase-like AMJAP_3008 IPR003430 Methane/phenol/toluene hydroxylase AMJAP_3008 IPR009078 Ferritin-like superfamily AMJAP_3008 IPR007029 YHS domain AMJAP_3009 IPR003454 Monooxygenase component MmoB/DmpM AMJAP_3009 IPR036889 Monooxygenase component MmoB/DmpM superfamily AMJAP_3010 IPR012078 Methane/phenol monooxygenase, hydroxylase component AMJAP_3010 IPR009078 Ferritin-like superfamily AMJAP_3010 IPR003430 Methane/phenol/toluene hydroxylase AMJAP_3010 IPR012348 Ribonucleotide reductase-like AMJAP_3011 IPR010353 Phenol hydroxylase subunit AMJAP_3012 IPR002197 DNA binding HTH domain, Fis-type AMJAP_3012 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3012 IPR003593 AAA+ ATPase domain AMJAP_3012 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_3012 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_3012 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_3012 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_3012 IPR004096 4-vinyl reductase, 4VR AMJAP_3012 IPR010523 Activator of aromatic catabolism AMJAP_3012 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily AMJAP_3012 IPR009057 Homeobox-like domain superfamily AMJAP_3013 IPR005330 MHYT domain AMJAP_3013 IPR001633 EAL domain AMJAP_3013 IPR035919 EAL domain superfamily AMJAP_3013 IPR000160 GGDEF domain AMJAP_3013 IPR029787 Nucleotide cyclase AMJAP_3014 IPR029058 Alpha/Beta hydrolase fold AMJAP_3014 IPR014186 S-formylglutathione hydrolase AMJAP_3014 IPR000801 Putative esterase AMJAP_3015 IPR020843 Polyketide synthase, enoylreductase domain AMJAP_3015 IPR036291 NAD(P)-binding domain superfamily AMJAP_3015 IPR011032 GroES-like superfamily AMJAP_3015 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site AMJAP_3015 IPR013154 Alcohol dehydrogenase, N-terminal AMJAP_3015 IPR014183 Alcohol dehydrogenase class III AMJAP_3015 IPR013149 Alcohol dehydrogenase, C-terminal AMJAP_3016 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_3016 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_3016 IPR000847 Transcription regulator HTH, LysR AMJAP_3016 IPR005119 LysR, substrate-binding AMJAP_3019 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3019 IPR011917 ABC transporter, lipid A export, MsbA AMJAP_3019 IPR039421 Type I protein exporter AMJAP_3019 IPR003439 ABC transporter-like AMJAP_3019 IPR011527 ABC transporter type 1, transmembrane domain AMJAP_3019 IPR036640 ABC transporter type 1, transmembrane domain superfamily AMJAP_3019 IPR017871 ABC transporter, conserved site AMJAP_3019 IPR003593 AAA+ ATPase domain AMJAP_3022 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_3022 IPR003660 HAMP domain AMJAP_3022 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_3022 IPR005467 Histidine kinase domain AMJAP_3022 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_3022 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_3023 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_3023 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_3023 IPR001789 Signal transduction response regulator, receiver domain AMJAP_3023 IPR011006 CheY-like superfamily AMJAP_3023 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_3023 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_3025 IPR000160 GGDEF domain AMJAP_3025 IPR029787 Nucleotide cyclase AMJAP_3025 IPR001633 EAL domain AMJAP_3025 IPR005330 MHYT domain AMJAP_3025 IPR035919 EAL domain superfamily AMJAP_3026 IPR011006 CheY-like superfamily AMJAP_3026 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_3026 IPR003660 HAMP domain AMJAP_3026 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_3026 IPR005467 Histidine kinase domain AMJAP_3026 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_3026 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_3026 IPR019247 Histidine kinase BarA, N-terminal AMJAP_3026 IPR036641 HPT domain superfamily AMJAP_3026 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_3026 IPR001789 Signal transduction response regulator, receiver domain AMJAP_3026 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AMJAP_3031 IPR001653 Diaminopimelate epimerase, DapF AMJAP_3031 IPR018510 Diaminopimelate epimerase, active site AMJAP_3032 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_3032 IPR005769 ABC transporter, permease PhnE/PtxC AMJAP_3032 IPR035906 MetI-like superfamily AMJAP_3033 IPR005119 LysR, substrate-binding AMJAP_3033 IPR003593 AAA+ ATPase domain AMJAP_3033 IPR003439 ABC transporter-like AMJAP_3033 IPR017871 ABC transporter, conserved site AMJAP_3033 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3033 IPR012693 ABC transporter, phosphonate import, PhnC AMJAP_3034 IPR030836 Putative ABC transporter periplasmic binding protein PhnD-like AMJAP_3034 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein AMJAP_3035 IPR033416 Periplasmic sensor domain CHASE7 AMJAP_3035 IPR000160 GGDEF domain AMJAP_3035 IPR029787 Nucleotide cyclase AMJAP_3036 IPR001123 Amino acid exporter protein, LeuE-type AMJAP_3037 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMJAP_3037 IPR007848 Methyltransferase small domain AMJAP_3037 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD AMJAP_3037 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_3038 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily AMJAP_3038 IPR010916 TonB box, conserved site AMJAP_3038 IPR012910 TonB-dependent receptor, plug domain AMJAP_3038 IPR000531 TonB-dependent receptor-like, beta-barrel AMJAP_3038 IPR039426 Vitamin B12 transporter BtuB-like AMJAP_3038 IPR010917 TonB-dependent receptor, conserved site AMJAP_3038 IPR037066 TonB-dependent receptor, plug domain superfamily AMJAP_3040 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_3040 IPR011006 CheY-like superfamily AMJAP_3040 IPR003660 HAMP domain AMJAP_3040 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AMJAP_3040 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_3040 IPR001789 Signal transduction response regulator, receiver domain AMJAP_3040 IPR019247 Histidine kinase BarA, N-terminal AMJAP_3040 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_3040 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_3040 IPR005467 Histidine kinase domain AMJAP_3040 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_3040 IPR036641 HPT domain superfamily AMJAP_3043 IPR006977 Yip1 domain AMJAP_3044 IPR000537 UbiA prenyltransferase family AMJAP_3044 IPR006369 Protohaem IX farnesyltransferase AMJAP_3044 IPR030470 UbiA prenyltransferase conserved site AMJAP_3045 IPR023754 Heme A synthase, type 2 AMJAP_3045 IPR003780 COX15/CtaA family AMJAP_3048 IPR033945 Cytochrome c oxidase subunit III domain AMJAP_3048 IPR035973 Cytochrome c oxidase subunit III-like superfamily AMJAP_3048 IPR024791 Cytochrome c oxidase subunit III AMJAP_3048 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle AMJAP_3048 IPR000298 Cytochrome c oxidase subunit III-like AMJAP_3049 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily AMJAP_3049 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 AMJAP_3050 IPR014241 Cytochrome c oxidase, subunit I bacterial type AMJAP_3050 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AMJAP_3050 IPR033944 Cytochrome c oxidase subunit I domain AMJAP_3050 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AMJAP_3050 IPR023616 Cytochrome c oxidase-like, subunit I domain AMJAP_3050 IPR000883 Cytochrome c oxidase subunit I AMJAP_3051 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily AMJAP_3051 IPR001505 Copper centre Cu(A) AMJAP_3051 IPR034210 Cytochrome c oxidase subunit 2, C-terminal AMJAP_3051 IPR002429 Cytochrome c oxidase subunit II-like C-terminal AMJAP_3051 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain AMJAP_3051 IPR008972 Cupredoxin AMJAP_3051 IPR014222 Cytochrome c oxidase, subunit II AMJAP_3052 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ AMJAP_3052 IPR013130 Ferric reductase transmembrane component-like domain AMJAP_3053 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP AMJAP_3053 IPR000572 Oxidoreductase, molybdopterin-binding domain AMJAP_3053 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily AMJAP_3054 IPR000462 CDP-alcohol phosphatidyltransferase AMJAP_3054 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase AMJAP_3055 IPR025777 GMP synthetase ATP pyrophosphatase domain AMJAP_3055 IPR029062 Class I glutamine amidotransferase-like AMJAP_3055 IPR017926 Glutamine amidotransferase AMJAP_3055 IPR001674 GMP synthase, C-terminal AMJAP_3055 IPR004739 GMP synthase, glutamine amidotransferase AMJAP_3055 IPR022955 GMP synthase AMJAP_3055 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_3055 IPR020536 Thil, AANH domain AMJAP_3056 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_3056 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AMJAP_3056 IPR002938 FAD-binding domain AMJAP_3057 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain AMJAP_3057 IPR005119 LysR, substrate-binding AMJAP_3057 IPR000847 Transcription regulator HTH, LysR AMJAP_3057 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_3057 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_3060 IPR008144 Guanylate kinase-like domain AMJAP_3060 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3060 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMJAP_3060 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN AMJAP_3061 IPR039557 AHAS, ACT domain AMJAP_3061 IPR002912 ACT domain AMJAP_3061 IPR019455 Acetolactate synthase, small subunit, C-terminal AMJAP_3061 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal AMJAP_3061 IPR004789 Acetolactate synthase, small subunit AMJAP_3062 IPR012846 Acetolactate synthase, large subunit, biosynthetic AMJAP_3062 IPR039368 Acetolactate synthase large subunit, TPP binding domain AMJAP_3062 IPR029035 DHS-like NAD/FAD-binding domain superfamily AMJAP_3062 IPR012000 Thiamine pyrophosphate enzyme, central domain AMJAP_3062 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding AMJAP_3062 IPR000399 TPP-binding enzyme, conserved site AMJAP_3062 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain AMJAP_3062 IPR029061 Thiamin diphosphate-binding fold AMJAP_3064 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 AMJAP_3064 IPR002307 Tyrosine-tRNA ligase AMJAP_3064 IPR036986 RNA-binding S4 domain superfamily AMJAP_3064 IPR002942 RNA-binding S4 domain AMJAP_3064 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_3064 IPR024088 Tyrosine-tRNA ligase, bacterial-type AMJAP_3064 IPR002305 Aminoacyl-tRNA synthetase, class Ic AMJAP_3065 IPR011055 Duplicated hybrid motif AMJAP_3065 IPR016047 Peptidase M23 AMJAP_3065 IPR007340 Opacity-associated protein A AMJAP_3066 IPR005338 Anhydro-N-acetylmuramic acid kinase AMJAP_3067 IPR005338 Anhydro-N-acetylmuramic acid kinase AMJAP_3068 IPR035903 HesB-like domain superfamily AMJAP_3068 IPR000361 FeS cluster biogenesis AMJAP_3068 IPR016092 FeS cluster insertion protein AMJAP_3068 IPR017870 FeS cluster insertion, C-terminal, conserved site AMJAP_3068 IPR023063 FeS cluster insertion protein ErpA AMJAP_3069 IPR012280 Semialdehyde dehydrogenase, dimerisation domain AMJAP_3069 IPR000534 Semialdehyde dehydrogenase, NAD-binding AMJAP_3069 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 AMJAP_3069 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site AMJAP_3069 IPR036291 NAD(P)-binding domain superfamily AMJAP_3070 IPR014743 Chloride channel, core AMJAP_3070 IPR023861 Chloride channel, ClcA AMJAP_3070 IPR001807 Chloride channel, voltage gated AMJAP_3071 IPR013785 Aldolase-type TIM barrel AMJAP_3071 IPR036206 Thiamin phosphate synthase superfamily AMJAP_3071 IPR034291 Thiamine phosphate synthase AMJAP_3071 IPR022998 Thiamine phosphate synthase/TenI AMJAP_3072 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_3072 IPR005814 Aminotransferase class-III AMJAP_3072 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_3072 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 AMJAP_3072 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase AMJAP_3076 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_3076 IPR018335 Transcription regulator HTH, Crp-type, conserved site AMJAP_3076 IPR014710 RmlC-like jelly roll fold AMJAP_3076 IPR012318 Crp-type HTH domain AMJAP_3076 IPR000595 Cyclic nucleotide-binding domain AMJAP_3076 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_3076 IPR018490 Cyclic nucleotide-binding-like AMJAP_3077 IPR036465 von Willebrand factor A-like domain superfamily AMJAP_3077 IPR002035 von Willebrand factor, type A AMJAP_3078 IPR013615 CbbQ/NirQ/NorQ, C-terminal AMJAP_3078 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3078 IPR011704 ATPase, dynein-related, AAA domain AMJAP_3080 IPR024791 Cytochrome c oxidase subunit III AMJAP_3080 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle AMJAP_3080 IPR035973 Cytochrome c oxidase subunit III-like superfamily AMJAP_3080 IPR000298 Cytochrome c oxidase subunit III-like AMJAP_3082 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site AMJAP_3082 IPR036927 Cytochrome c oxidase-like, subunit I superfamily AMJAP_3082 IPR000883 Cytochrome c oxidase subunit I AMJAP_3082 IPR023616 Cytochrome c oxidase-like, subunit I domain AMJAP_3083 IPR036909 Cytochrome c-like domain superfamily AMJAP_3083 IPR009056 Cytochrome c-like domain AMJAP_3086 IPR028166 Bifunctional transglycosylase second domain AMJAP_3086 IPR036950 Penicillin binding protein transglycosylase domain AMJAP_3086 IPR012338 Beta-lactamase/transpeptidase-like AMJAP_3086 IPR001264 Glycosyl transferase, family 51 AMJAP_3086 IPR023346 Lysozyme-like domain superfamily AMJAP_3086 IPR001460 Penicillin-binding protein, transpeptidase AMJAP_3086 IPR011813 Penicillin-binding protein 1B AMJAP_3088 IPR015863 ABC transporter, hemin import, HmuV AMJAP_3088 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3088 IPR003439 ABC transporter-like AMJAP_3088 IPR003593 AAA+ ATPase domain AMJAP_3089 IPR037294 ABC transporter, BtuC-like AMJAP_3089 IPR000522 ABC transporter, permease protein, BtuC-like AMJAP_3090 IPR006260 TonB/TolA, C-terminal AMJAP_3090 IPR037682 TonB, C-terminal AMJAP_3090 IPR003538 Gram-negative bacterial TonB protein AMJAP_3092 IPR040452 Sugar fermentation stimulation protein, C-terminal AMJAP_3092 IPR041465 SfsA, N-terminal OB domain AMJAP_3092 IPR005224 Sugar fermentation stimulation protein AMJAP_3093 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site AMJAP_3093 IPR015424 Pyridoxal phosphate-dependent transferase AMJAP_3093 IPR015421 Pyridoxal phosphate-dependent transferase, major domain AMJAP_3093 IPR004839 Aminotransferase, class I/classII AMJAP_3094 IPR037187 DksA, N-terminal domain superfamily AMJAP_3094 IPR012784 RNA polymerase-binding transcription factor DksA AMJAP_3094 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria AMJAP_3094 IPR020458 Zinc finger, DksA/TraR C4-type conserved site AMJAP_3094 IPR000962 Zinc finger, DksA/TraR C4-type AMJAP_3095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_3095 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain AMJAP_3095 IPR000924 Glutamyl/glutaminyl-tRNA synthetase AMJAP_3095 IPR022380 Glutamyl-Q tRNA(Asp) synthetase AMJAP_3097 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_3097 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_3097 IPR005467 Histidine kinase domain AMJAP_3097 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_3097 IPR029151 Periplasmic sensor-like domain superfamily AMJAP_3097 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_3097 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_3098 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_3098 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_3098 IPR009057 Homeobox-like domain superfamily AMJAP_3098 IPR011006 CheY-like superfamily AMJAP_3098 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_3098 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_3098 IPR002197 DNA binding HTH domain, Fis-type AMJAP_3098 IPR003593 AAA+ ATPase domain AMJAP_3098 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3098 IPR001789 Signal transduction response regulator, receiver domain AMJAP_3099 IPR010206 Poly(A) polymerase I AMJAP_3099 IPR002646 Poly A polymerase, head domain AMJAP_3099 IPR025866 Polymerase A arginine-rich C-terminal domain AMJAP_3099 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AMJAP_3100 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily AMJAP_3100 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK AMJAP_3101 IPR040442 Pyruvate kinase-like domain superfamily AMJAP_3101 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMJAP_3101 IPR003700 Ketopantoate hydroxymethyltransferase AMJAP_3102 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_3102 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain AMJAP_3102 IPR003721 Pantoate-beta-alanine ligase AMJAP_3103 IPR016039 Thiolase-like AMJAP_3103 IPR020616 Thiolase, N-terminal AMJAP_3103 IPR020613 Thiolase, conserved site AMJAP_3103 IPR020617 Thiolase, C-terminal AMJAP_3103 IPR020610 Thiolase, active site AMJAP_3103 IPR020615 Thiolase, acyl-enzyme intermediate active site AMJAP_3103 IPR002155 Thiolase AMJAP_3105 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site AMJAP_3105 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F AMJAP_3105 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_3105 IPR036986 RNA-binding S4 domain superfamily AMJAP_3105 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_3105 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain AMJAP_3105 IPR002942 RNA-binding S4 domain AMJAP_3106 IPR013675 Methyltransferase small, N-terminal AMJAP_3106 IPR002052 DNA methylase, N-6 adenine-specific, conserved site AMJAP_3106 IPR023543 rRNA small subunit methyltransferase C AMJAP_3106 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_3106 IPR007848 Methyltransferase small domain AMJAP_3109 IPR041017 DipZ, thioredoxin-like C-terminal domain AMJAP_3109 IPR036249 Thioredoxin-like superfamily AMJAP_3109 IPR008979 Galactose-binding-like domain superfamily AMJAP_3109 IPR003834 Cytochrome C biogenesis protein, transmembrane domain AMJAP_3109 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AMJAP_3109 IPR013766 Thioredoxin domain AMJAP_3112 IPR036345 Exoribonuclease, PH domain 2 superfamily AMJAP_3112 IPR004087 K Homology domain AMJAP_3112 IPR004088 K Homology domain, type 1 AMJAP_3112 IPR012340 Nucleic acid-binding, OB-fold AMJAP_3112 IPR015847 Exoribonuclease, phosphorolytic domain 2 AMJAP_3112 IPR012162 Polyribonucleotide nucleotidyltransferase AMJAP_3112 IPR027408 PNPase/RNase PH domain superfamily AMJAP_3112 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain AMJAP_3112 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily AMJAP_3112 IPR036612 K Homology domain, type 1 superfamily AMJAP_3112 IPR001247 Exoribonuclease, phosphorolytic domain 1 AMJAP_3112 IPR022967 RNA-binding domain, S1 AMJAP_3112 IPR003029 S1 domain AMJAP_3112 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_3113 IPR009068 S15/NS1, RNA-binding AMJAP_3113 IPR005290 Ribosomal protein S15, bacterial-type AMJAP_3113 IPR000589 Ribosomal protein S15 AMJAP_3114 IPR002501 Pseudouridine synthase II, N-terminal AMJAP_3114 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_3114 IPR036974 PUA domain superfamily AMJAP_3114 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal AMJAP_3114 IPR032819 tRNA pseudouridylate synthase B, C-terminal AMJAP_3114 IPR015947 PUA-like superfamily AMJAP_3114 IPR014780 tRNA pseudouridine synthase II, TruB AMJAP_3115 IPR000238 Ribosome-binding factor A AMJAP_3115 IPR015946 K homology domain-like, alpha/beta AMJAP_3115 IPR020053 Ribosome-binding factor A, conserved site AMJAP_3115 IPR023799 Ribosome-binding factor A domain superfamily AMJAP_3116 IPR000178 Translation initiation factor aIF-2, bacterial-like AMJAP_3116 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_3116 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AMJAP_3116 IPR023115 Translation initiation factor IF- 2, domain 3 AMJAP_3116 IPR015760 Translation initiation factor IF- 2 AMJAP_3116 IPR000795 Transcription factor, GTP-binding domain AMJAP_3116 IPR005225 Small GTP-binding protein domain AMJAP_3116 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3116 IPR006847 Translation initiation factor IF-2, N-terminal AMJAP_3116 IPR013575 Initiation factor 2 associated domain, bacterial AMJAP_3116 IPR009061 Putative DNA-binding domain superfamily AMJAP_3117 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical AMJAP_3117 IPR012340 Nucleic acid-binding, OB-fold AMJAP_3117 IPR009019 K homology domain superfamily, prokaryotic type AMJAP_3117 IPR030842 Transcription termination/antitermination protein NusA, bacterial AMJAP_3117 IPR015946 K homology domain-like, alpha/beta AMJAP_3117 IPR036555 NusA, N-terminal domain superfamily AMJAP_3117 IPR022967 RNA-binding domain, S1 AMJAP_3117 IPR003029 S1 domain AMJAP_3117 IPR013735 Transcription factor NusA, N-terminal AMJAP_3117 IPR010214 Transcription termination factor NusA, C-terminal duplication AMJAP_3117 IPR010213 Transcription termination factor NusA AMJAP_3117 IPR025249 KH domain, NusA-like AMJAP_3118 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily AMJAP_3118 IPR035956 RimP, N-terminal domain superfamily AMJAP_3118 IPR028989 Ribosome maturation factor RimP, N-terminal AMJAP_3118 IPR028998 Ribosome maturation factor RimP, C-terminal AMJAP_3118 IPR003728 Ribosome maturation factor RimP AMJAP_3119 IPR004692 Preprotein translocase SecG subunit AMJAP_3120 IPR013785 Aldolase-type TIM barrel AMJAP_3120 IPR035990 Triosephosphate isomerase superfamily AMJAP_3120 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic AMJAP_3120 IPR000652 Triosephosphate isomerase AMJAP_3120 IPR020861 Triosephosphate isomerase, active site AMJAP_3121 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II AMJAP_3121 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III AMJAP_3121 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I AMJAP_3121 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III AMJAP_3121 IPR005841 Alpha-D-phosphohexomutase superfamily AMJAP_3121 IPR006352 Phosphoglucosamine mutase, bacterial type AMJAP_3121 IPR005843 Alpha-D-phosphohexomutase, C-terminal AMJAP_3121 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily AMJAP_3121 IPR016066 Alpha-D-phosphohexomutase, conserved site AMJAP_3122 IPR006390 Dihydropteroate synthase AMJAP_3122 IPR011005 Dihydropteroate synthase-like AMJAP_3122 IPR000489 Pterin-binding domain AMJAP_3123 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3123 IPR037219 Peptidase M41-like AMJAP_3123 IPR005936 Peptidase, FtsH AMJAP_3123 IPR011546 Peptidase M41, FtsH extracellular AMJAP_3123 IPR003593 AAA+ ATPase domain AMJAP_3123 IPR041569 AAA ATPase, AAA+ lid domain AMJAP_3123 IPR003959 ATPase, AAA-type, core AMJAP_3123 IPR003960 ATPase, AAA-type, conserved site AMJAP_3123 IPR000642 Peptidase M41 AMJAP_3124 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_3124 IPR015507 Ribosomal RNA large subunit methyltransferase E AMJAP_3124 IPR002877 Ribosomal RNA methyltransferase FtsJ domain AMJAP_3125 IPR001890 RNA-binding, CRM domain AMJAP_3125 IPR035920 YhbY-like superfamily AMJAP_3125 IPR017924 RNA-binding protein YhbY AMJAP_3126 IPR023459 Transcription elongation factor GreA/GreB family AMJAP_3126 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal AMJAP_3126 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily AMJAP_3126 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal AMJAP_3126 IPR028624 Transcription elongation factor GreA/GreB AMJAP_3126 IPR006359 Transcription elongation factor GreA AMJAP_3126 IPR018151 Transcription elongation factor, GreA/GreB, conserved site AMJAP_3126 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily AMJAP_3127 IPR011607 Methylglyoxal synthase-like domain AMJAP_3127 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain AMJAP_3127 IPR006275 Carbamoyl-phosphate synthase, large subunit AMJAP_3127 IPR036914 Methylglyoxal synthase-like domain superfamily AMJAP_3127 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain AMJAP_3127 IPR011761 ATP-grasp fold AMJAP_3127 IPR016185 Pre-ATP-grasp domain superfamily AMJAP_3127 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain AMJAP_3127 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain AMJAP_3127 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily AMJAP_3128 IPR017926 Glutamine amidotransferase AMJAP_3128 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain AMJAP_3128 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily AMJAP_3128 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain AMJAP_3128 IPR006274 Carbamoyl-phosphate synthase, small subunit AMJAP_3128 IPR029062 Class I glutamine amidotransferase-like AMJAP_3130 IPR018368 ClpA/B, conserved site 1 AMJAP_3130 IPR017730 Chaperonin ClpB AMJAP_3130 IPR003959 ATPase, AAA-type, core AMJAP_3130 IPR003593 AAA+ ATPase domain AMJAP_3130 IPR019489 Clp ATPase, C-terminal AMJAP_3130 IPR036628 Clp, N-terminal domain superfamily AMJAP_3130 IPR001270 ClpA/B family AMJAP_3130 IPR028299 ClpA/B, conserved site 2 AMJAP_3130 IPR004176 Clp, N-terminal AMJAP_3130 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3130 IPR041546 ClpA/ClpB, AAA lid domain AMJAP_3131 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3131 IPR011640 Ferrous iron transport protein B, C-terminal AMJAP_3131 IPR003373 Ferrous iron transport protein B AMJAP_3131 IPR038157 Ferrous iron transporter, core domain AMJAP_3131 IPR041069 FeoB, cytosolic helical domain AMJAP_3131 IPR005225 Small GTP-binding protein domain AMJAP_3131 IPR007167 Ferrous iron transporter FeoA domain AMJAP_3131 IPR030389 FeoB-type guanine nucleotide-binding (G) domain AMJAP_3131 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain AMJAP_3131 IPR006073 GTP binding domain AMJAP_3131 IPR008988 Transcriptional repressor, C-terminal AMJAP_3133 IPR038371 Multi-copper polyphenol oxidoreductase superfamily AMJAP_3133 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMJAP_3133 IPR003730 Multi-copper polyphenol oxidoreductase AMJAP_3134 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site AMJAP_3134 IPR006145 Pseudouridine synthase, RsuA/RluA AMJAP_3134 IPR002942 RNA-binding S4 domain AMJAP_3134 IPR020103 Pseudouridine synthase, catalytic domain superfamily AMJAP_3134 IPR036986 RNA-binding S4 domain superfamily AMJAP_3134 IPR006225 Pseudouridine synthase, RluC/RluD AMJAP_3135 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_3135 IPR039565 Outer membrane lipoprotein BamD-like AMJAP_3135 IPR017689 Outer membrane protein assembly factor BamD AMJAP_3136 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_3136 IPR022310 NAD/GMP synthase AMJAP_3136 IPR022926 NH(3)-dependent NAD(+) synthetase AMJAP_3136 IPR003694 NAD(+) synthetase AMJAP_3137 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_3137 IPR012727 Glycine oxidase ThiO AMJAP_3137 IPR006076 FAD dependent oxidoreductase AMJAP_3138 IPR031982 Type IV minor pilin ComP AMJAP_3138 IPR012902 Prokaryotic N-terminal methylation site AMJAP_3139 IPR008707 PilC beta-propeller domain AMJAP_3139 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMJAP_3143 IPR001082 Fimbrial protein pilin AMJAP_3143 IPR012902 Prokaryotic N-terminal methylation site AMJAP_3144 IPR012902 Prokaryotic N-terminal methylation site AMJAP_3145 IPR031982 Type IV minor pilin ComP AMJAP_3145 IPR012902 Prokaryotic N-terminal methylation site AMJAP_3146 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AMJAP_3146 IPR008707 PilC beta-propeller domain AMJAP_3150 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMJAP_3151 IPR001872 Peptidase A8, signal peptidase II AMJAP_3152 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain AMJAP_3152 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding AMJAP_3152 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_3152 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding AMJAP_3152 IPR023585 Isoleucine-tRNA ligase, type 1 AMJAP_3152 IPR002301 Isoleucine-tRNA ligase AMJAP_3152 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain AMJAP_3152 IPR002300 Aminoacyl-tRNA synthetase, class Ia AMJAP_3152 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site AMJAP_3152 IPR010663 Zinc finger, FPG/IleRS-type AMJAP_3153 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic AMJAP_3153 IPR002606 Riboflavin kinase, bacterial AMJAP_3153 IPR023468 Riboflavin kinase AMJAP_3153 IPR015864 FAD synthetase AMJAP_3153 IPR023465 Riboflavin kinase domain superfamily AMJAP_3153 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMJAP_3154 IPR004268 Peptidoglycan biosynthesis protein MurJ AMJAP_3155 IPR036510 Ribosomal protein S20 superfamily AMJAP_3155 IPR002583 Ribosomal protein S20 AMJAP_3156 IPR036974 PUA domain superfamily AMJAP_3156 IPR041739 Glutamate-5-kinase domain AMJAP_3156 IPR011529 Glutamate 5-kinase AMJAP_3156 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase AMJAP_3156 IPR019797 Glutamate 5-kinase, conserved site AMJAP_3156 IPR001048 Aspartate/glutamate/uridylate kinase AMJAP_3156 IPR036393 Acetylglutamate kinase-like superfamily AMJAP_3156 IPR002478 PUA domain AMJAP_3156 IPR001057 Glutamate/acetylglutamate kinase AMJAP_3156 IPR015947 PUA-like superfamily AMJAP_3157 IPR035101 GTP-binding protein, Obg-type AMJAP_3157 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3157 IPR031167 OBG-type guanine nucleotide-binding (G) domain AMJAP_3157 IPR006073 GTP binding domain AMJAP_3157 IPR014100 GTP-binding protein Obg/CgtA AMJAP_3157 IPR006074 GTP1/OBG, conserved site AMJAP_3157 IPR036726 GTP1/OBG domain superfamily AMJAP_3157 IPR006169 GTP1/OBG domain AMJAP_3158 IPR018261 Ribosomal protein L27, conserved site AMJAP_3158 IPR001684 Ribosomal protein L27 AMJAP_3159 IPR018258 Ribosomal protein L21, conserved site AMJAP_3159 IPR036164 L21-like superfamily AMJAP_3159 IPR028909 Ribosomal protein L21-like AMJAP_3159 IPR001787 Ribosomal protein L21 AMJAP_3160 IPR008949 Isoprenoid synthase domain superfamily AMJAP_3160 IPR033749 Polyprenyl synthetase, conserved site AMJAP_3160 IPR000092 Polyprenyl synthetase AMJAP_3161 IPR029069 HotDog domain superfamily AMJAP_3161 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ AMJAP_3161 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA AMJAP_3162 IPR018201 Beta-ketoacyl synthase, active site AMJAP_3162 IPR000794 Beta-ketoacyl synthase AMJAP_3162 IPR014031 Beta-ketoacyl synthase, C-terminal AMJAP_3162 IPR014030 Beta-ketoacyl synthase, N-terminal AMJAP_3162 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMJAP_3162 IPR016039 Thiolase-like AMJAP_3164 IPR023045 Molybdenum cofactor biosynthesis C AMJAP_3164 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily AMJAP_3164 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain AMJAP_3166 IPR010505 Molybdenum cofactor synthesis C-terminal AMJAP_3166 IPR007197 Radical SAM AMJAP_3166 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site AMJAP_3166 IPR013483 Molybdenum cofactor biosynthesis protein A AMJAP_3166 IPR006638 Elp3/MiaB/NifB AMJAP_3166 IPR013785 Aldolase-type TIM barrel AMJAP_3168 IPR005913 dTDP-4-dehydrorhamnose reductase family AMJAP_3168 IPR036291 NAD(P)-binding domain superfamily AMJAP_3168 IPR029903 RmlD-like substrate binding domain AMJAP_3170 IPR000160 GGDEF domain AMJAP_3170 IPR035919 EAL domain superfamily AMJAP_3170 IPR001633 EAL domain AMJAP_3170 IPR005330 MHYT domain AMJAP_3170 IPR029787 Nucleotide cyclase AMJAP_3171 IPR000424 Primosome PriB/single-strand DNA-binding AMJAP_3171 IPR011344 Single-stranded DNA-binding protein AMJAP_3171 IPR012340 Nucleic acid-binding, OB-fold AMJAP_3172 IPR041102 UvrA, interaction domain AMJAP_3172 IPR003439 ABC transporter-like AMJAP_3172 IPR004602 UvrABC system subunit A AMJAP_3172 IPR017871 ABC transporter, conserved site AMJAP_3172 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3172 IPR041552 UvrA DNA-binding domain AMJAP_3173 IPR000456 Ribosomal protein L17 AMJAP_3173 IPR036373 Ribosomal protein L17 superfamily AMJAP_3174 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type AMJAP_3174 IPR011262 DNA-directed RNA polymerase, insert domain AMJAP_3174 IPR036603 RNA polymerase, RBP11-like subunit AMJAP_3174 IPR036643 DNA-directed RNA polymerase, insert domain superfamily AMJAP_3174 IPR011260 RNA polymerase, alpha subunit, C-terminal AMJAP_3174 IPR011773 DNA-directed RNA polymerase, alpha subunit AMJAP_3175 IPR036986 RNA-binding S4 domain superfamily AMJAP_3175 IPR002942 RNA-binding S4 domain AMJAP_3175 IPR018079 Ribosomal protein S4, conserved site AMJAP_3175 IPR005709 Ribosomal protein S4, bacterial-type AMJAP_3175 IPR001912 Ribosomal protein S4/S9, N-terminal AMJAP_3175 IPR022801 Ribosomal protein S4/S9 AMJAP_3176 IPR018102 Ribosomal S11, conserved site AMJAP_3176 IPR019981 Ribosomal protein S11, bacterial-type AMJAP_3176 IPR001971 Ribosomal protein S11 AMJAP_3176 IPR036967 Ribosomal protein S11 superfamily AMJAP_3177 IPR027437 30s ribosomal protein S13, C-terminal AMJAP_3177 IPR001892 Ribosomal protein S13 AMJAP_3177 IPR019980 Ribosomal protein S13, bacterial-type AMJAP_3177 IPR018269 Ribosomal protein S13, conserved site AMJAP_3177 IPR010979 Ribosomal protein S13-like, H2TH AMJAP_3178 IPR000473 Ribosomal protein L36 AMJAP_3178 IPR035977 Ribosomal protein L36 superfamily AMJAP_3179 IPR023201 SecY domain superfamily AMJAP_3179 IPR002208 SecY/SEC61-alpha family AMJAP_3179 IPR026593 Protein translocase subunit SecY AMJAP_3179 IPR030659 SecY conserved site AMJAP_3180 IPR021131 Ribosomal protein L18e/L15P AMJAP_3180 IPR001196 Ribosomal protein L15, conserved site AMJAP_3180 IPR005749 Ribosomal protein L15, bacterial-type AMJAP_3180 IPR036227 Ribosomal L18e/L15P superfamily AMJAP_3180 IPR030878 Ribosomal protein L15 AMJAP_3181 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMJAP_3181 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily AMJAP_3181 IPR005996 Ribosomal protein L30, bacterial-type AMJAP_3182 IPR005324 Ribosomal protein S5, C-terminal AMJAP_3182 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_3182 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_3182 IPR013810 Ribosomal protein S5, N-terminal AMJAP_3182 IPR005712 Ribosomal protein S5, bacterial-type AMJAP_3182 IPR018192 Ribosomal protein S5, N-terminal, conserved site AMJAP_3182 IPR000851 Ribosomal protein S5 AMJAP_3183 IPR004389 Ribosomal protein L18, bacterial-type AMJAP_3183 IPR005484 Ribosomal protein L18 AMJAP_3184 IPR000702 Ribosomal protein L6 AMJAP_3184 IPR020040 Ribosomal protein L6, alpha-beta domain AMJAP_3184 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily AMJAP_3184 IPR002358 Ribosomal protein L6, conserved site AMJAP_3184 IPR019906 Ribosomal protein L6, bacterial-type AMJAP_3185 IPR000630 Ribosomal protein S8 AMJAP_3185 IPR035987 Ribosomal protein S8 superfamily AMJAP_3186 IPR023036 Ribosomal protein S14, bacterial/plastid AMJAP_3186 IPR018271 Ribosomal protein S14, conserved site AMJAP_3186 IPR001209 Ribosomal protein S14 AMJAP_3187 IPR022803 Ribosomal protein L5 domain superfamily AMJAP_3187 IPR031309 Ribosomal protein L5, C-terminal AMJAP_3187 IPR020930 Ribosomal protein L5, bacterial-type AMJAP_3187 IPR002132 Ribosomal protein L5 AMJAP_3187 IPR031310 Ribosomal protein L5, N-terminal AMJAP_3187 IPR020929 Ribosomal protein L5, conserved site AMJAP_3188 IPR005824 KOW AMJAP_3188 IPR041988 Ribosomal Protein L26/L24, KOW domain AMJAP_3188 IPR008991 Translation protein SH3-like domain superfamily AMJAP_3188 IPR005825 Ribosomal protein L24/L26, conserved site AMJAP_3188 IPR003256 Ribosomal protein L24 AMJAP_3188 IPR014722 Ribosomal protein L2, domain 2 AMJAP_3189 IPR005745 Ribosomal protein L14P, bacterial-type AMJAP_3189 IPR019972 Ribosomal protein L14P, conserved site AMJAP_3189 IPR000218 Ribosomal protein L14P AMJAP_3189 IPR036853 Ribosomal protein L14 superfamily AMJAP_3190 IPR012340 Nucleic acid-binding, OB-fold AMJAP_3190 IPR019984 30S ribosomal protein S17 AMJAP_3190 IPR000266 Ribosomal protein S17/S11 AMJAP_3190 IPR019979 Ribosomal protein S17, conserved site AMJAP_3191 IPR036049 Ribosomal protein L29/L35 superfamily AMJAP_3191 IPR018254 Ribosomal protein L29, conserved site AMJAP_3191 IPR001854 Ribosomal protein L29/L35 AMJAP_3192 IPR020798 Ribosomal protein L16, conserved site AMJAP_3192 IPR000114 Ribosomal protein L16 AMJAP_3192 IPR036920 Ribosomal protein L10e/L16 superfamily AMJAP_3192 IPR016180 Ribosomal protein L10e/L16 AMJAP_3193 IPR005704 Ribosomal protein S3, bacterial-type AMJAP_3193 IPR009019 K homology domain superfamily, prokaryotic type AMJAP_3193 IPR036419 Ribosomal protein S3, C-terminal domain superfamily AMJAP_3193 IPR018280 Ribosomal protein S3, conserved site AMJAP_3193 IPR004044 K Homology domain, type 2 AMJAP_3193 IPR015946 K homology domain-like, alpha/beta AMJAP_3193 IPR001351 Ribosomal protein S3, C-terminal AMJAP_3193 IPR004087 K Homology domain AMJAP_3194 IPR018260 Ribosomal protein L22/L17, conserved site AMJAP_3194 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type AMJAP_3194 IPR001063 Ribosomal protein L22/L17 AMJAP_3194 IPR036394 Ribosomal protein L22/L17 superfamily AMJAP_3195 IPR020934 Ribosomal protein S19 conserved site AMJAP_3195 IPR002222 Ribosomal protein S19/S15 AMJAP_3195 IPR005732 Ribosomal protein S19, bacterial-type AMJAP_3195 IPR023575 Ribosomal protein S19, superfamily AMJAP_3196 IPR022671 Ribosomal protein L2, conserved site AMJAP_3196 IPR022669 Ribosomal protein L2, C-terminal AMJAP_3196 IPR005880 Ribosomal protein L2, bacterial/organellar-type AMJAP_3196 IPR002171 Ribosomal protein L2 AMJAP_3196 IPR014722 Ribosomal protein L2, domain 2 AMJAP_3196 IPR014726 Ribosomal protein L2, domain 3 AMJAP_3196 IPR012340 Nucleic acid-binding, OB-fold AMJAP_3196 IPR008991 Translation protein SH3-like domain superfamily AMJAP_3196 IPR022666 Ribosomal Proteins L2, RNA binding domain AMJAP_3197 IPR012678 Ribosomal protein L23/L15e core domain superfamily AMJAP_3197 IPR001014 Ribosomal protein L23/L25, conserved site AMJAP_3197 IPR013025 Ribosomal protein L25/L23 AMJAP_3197 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AMJAP_3198 IPR023574 Ribosomal protein L4 domain superfamily AMJAP_3198 IPR002136 Ribosomal protein L4/L1e AMJAP_3198 IPR013005 50S ribosomal protein uL4 AMJAP_3199 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_3199 IPR000597 Ribosomal protein L3 AMJAP_3199 IPR019927 Ribosomal protein L3, bacterial/organelle-type AMJAP_3199 IPR019926 Ribosomal protein L3, conserved site AMJAP_3200 IPR001848 Ribosomal protein S10 AMJAP_3200 IPR018268 Ribosomal protein S10, conserved site AMJAP_3200 IPR027486 Ribosomal protein S10 domain AMJAP_3200 IPR036838 Ribosomal protein S10 domain superfamily AMJAP_3201 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_3201 IPR000795 Transcription factor, GTP-binding domain AMJAP_3201 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AMJAP_3201 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMJAP_3201 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AMJAP_3201 IPR005225 Small GTP-binding protein domain AMJAP_3201 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3201 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMJAP_3201 IPR004161 Translation elongation factor EFTu-like, domain 2 AMJAP_3201 IPR031157 Tr-type G domain, conserved site AMJAP_3201 IPR033720 Elongation factor Tu, domain 2 AMJAP_3202 IPR035649 EFG, domain V AMJAP_3202 IPR005517 Translation elongation factor EFG/EF2, domain IV AMJAP_3202 IPR035647 EF-G domain III/V-like AMJAP_3202 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_3202 IPR004161 Translation elongation factor EFTu-like, domain 2 AMJAP_3202 IPR041095 Elongation Factor G, domain II AMJAP_3202 IPR000640 Elongation factor EFG, domain V-like AMJAP_3202 IPR031157 Tr-type G domain, conserved site AMJAP_3202 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3202 IPR004540 Translation elongation factor EFG/EF2 AMJAP_3202 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_3202 IPR005225 Small GTP-binding protein domain AMJAP_3202 IPR009022 Elongation factor G, domain III AMJAP_3202 IPR000795 Transcription factor, GTP-binding domain AMJAP_3202 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_3203 IPR000235 Ribosomal protein S5/S7 AMJAP_3203 IPR036823 Ribosomal protein S7 domain superfamily AMJAP_3203 IPR023798 Ribosomal protein S7 domain AMJAP_3203 IPR005717 Ribosomal protein S7, bacterial/organellar-type AMJAP_3204 IPR006032 Ribosomal protein S12/S23 AMJAP_3204 IPR005679 Ribosomal protein S12, bacterial-type AMJAP_3204 IPR012340 Nucleic acid-binding, OB-fold AMJAP_3205 IPR007081 RNA polymerase Rpb1, domain 5 AMJAP_3205 IPR006592 RNA polymerase, N-terminal AMJAP_3205 IPR007080 RNA polymerase Rpb1, domain 1 AMJAP_3205 IPR007066 RNA polymerase Rpb1, domain 3 AMJAP_3205 IPR000722 RNA polymerase, alpha subunit AMJAP_3205 IPR007083 RNA polymerase Rpb1, domain 4 AMJAP_3205 IPR042102 RNA polymerase Rpb1, domain 3 superfamily AMJAP_3205 IPR012754 DNA-directed RNA polymerase, subunit beta-prime AMJAP_3205 IPR038120 RNA polymerase Rpb1, funnel domain superfamily AMJAP_3206 IPR037034 RNA polymerase Rpb2, domain 2 superfamily AMJAP_3206 IPR007642 RNA polymerase Rpb2, domain 2 AMJAP_3206 IPR007641 RNA polymerase Rpb2, domain 7 AMJAP_3206 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily AMJAP_3206 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain AMJAP_3206 IPR015712 DNA-directed RNA polymerase, subunit 2 AMJAP_3206 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain AMJAP_3206 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily AMJAP_3206 IPR014724 RNA polymerase Rpb2, OB-fold AMJAP_3206 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type AMJAP_3206 IPR007121 RNA polymerase, beta subunit, conserved site AMJAP_3206 IPR007645 RNA polymerase Rpb2, domain 3 AMJAP_3206 IPR007644 RNA polymerase, beta subunit, protrusion AMJAP_3207 IPR000206 Ribosomal protein L7/L12 AMJAP_3207 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMJAP_3207 IPR013823 Ribosomal protein L7/L12, C-terminal AMJAP_3207 IPR008932 Ribosomal protein L7/L12, oligomerisation AMJAP_3207 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily AMJAP_3208 IPR001790 Ribosomal protein L10P AMJAP_3208 IPR022973 Ribosomal protein L10 AMJAP_3209 IPR005878 Ribosomal protein L1, bacterial-type AMJAP_3209 IPR002143 Ribosomal protein L1 AMJAP_3209 IPR023674 Ribosomal protein L1-like AMJAP_3209 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AMJAP_3209 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AMJAP_3209 IPR023673 Ribosomal protein L1, conserved site AMJAP_3210 IPR020784 Ribosomal protein L11, N-terminal AMJAP_3210 IPR020785 Ribosomal protein L11, conserved site AMJAP_3210 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AMJAP_3210 IPR020783 Ribosomal protein L11, C-terminal AMJAP_3210 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AMJAP_3210 IPR000911 Ribosomal protein L11/L12 AMJAP_3210 IPR006519 Ribosomal protein L11, bacterial-type AMJAP_3211 IPR006645 NusG, N-terminal AMJAP_3211 IPR005824 KOW AMJAP_3211 IPR036735 NusG, N-terminal domain superfamily AMJAP_3211 IPR001062 Transcription antitermination protein, NusG AMJAP_3211 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AMJAP_3211 IPR008991 Translation protein SH3-like domain superfamily AMJAP_3211 IPR014722 Ribosomal protein L2, domain 2 AMJAP_3212 IPR005807 SecE subunit of protein translocation complex, bacterial-like AMJAP_3212 IPR038379 SecE superfamily AMJAP_3212 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit AMJAP_3213 IPR000795 Transcription factor, GTP-binding domain AMJAP_3213 IPR031157 Tr-type G domain, conserved site AMJAP_3213 IPR005225 Small GTP-binding protein domain AMJAP_3213 IPR009000 Translation protein, beta-barrel domain superfamily AMJAP_3213 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMJAP_3213 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle AMJAP_3213 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3213 IPR004161 Translation elongation factor EFTu-like, domain 2 AMJAP_3213 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMJAP_3213 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain AMJAP_3213 IPR033720 Elongation factor Tu, domain 2 AMJAP_3215 IPR004619 Type III pantothenate kinase AMJAP_3216 IPR030855 Bifunctional ligase/repressor BirA AMJAP_3216 IPR008988 Transcriptional repressor, C-terminal AMJAP_3216 IPR004408 Biotin--acetyl-CoA-carboxylase ligase AMJAP_3216 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_3216 IPR036390 Winged helix DNA-binding domain superfamily AMJAP_3216 IPR013196 Helix-turn-helix, type 11 AMJAP_3216 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain AMJAP_3216 IPR004409 Biotin operon repressor, helix-turn-helix domain AMJAP_3216 IPR003142 Biotin protein ligase, C-terminal AMJAP_3217 IPR012259 Dihydrofolate reductase AMJAP_3217 IPR024072 Dihydrofolate reductase-like domain superfamily AMJAP_3217 IPR001796 Dihydrofolate reductase domain AMJAP_3217 IPR017925 Dihydrofolate reductase conserved site AMJAP_3218 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain AMJAP_3218 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily AMJAP_3218 IPR020940 Thymidylate synthase, active site AMJAP_3218 IPR000398 Thymidylate synthase AMJAP_3219 IPR020084 NUDIX hydrolase, conserved site AMJAP_3219 IPR022927 RNA pyrophosphohydrolase RppH AMJAP_3219 IPR000086 NUDIX hydrolase domain AMJAP_3219 IPR015797 NUDIX hydrolase-like domain superfamily AMJAP_3219 IPR020476 NUDIX hydrolase AMJAP_3220 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt AMJAP_3222 IPR040442 Pyruvate kinase-like domain superfamily AMJAP_3222 IPR008731 Phosphotransferase system, enzyme I N-terminal AMJAP_3222 IPR006318 Phosphotransferase system, enzyme I-like AMJAP_3222 IPR036637 Phosphohistidine domain superfamily AMJAP_3222 IPR018274 PEP-utilising enzyme, active site AMJAP_3222 IPR000121 PEP-utilising enzyme, C-terminal AMJAP_3222 IPR023151 PEP-utilising enzyme, conserved site AMJAP_3222 IPR029016 GAF-like domain superfamily AMJAP_3222 IPR003018 GAF domain AMJAP_3222 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMJAP_3222 IPR008279 PEP-utilising enzyme, mobile domain AMJAP_3222 IPR036618 PtsI, HPr-binding domain superfamily AMJAP_3223 IPR015797 NUDIX hydrolase-like domain superfamily AMJAP_3223 IPR020084 NUDIX hydrolase, conserved site AMJAP_3223 IPR020476 NUDIX hydrolase AMJAP_3223 IPR022927 RNA pyrophosphohydrolase RppH AMJAP_3223 IPR000086 NUDIX hydrolase domain AMJAP_3226 IPR023210 NADP-dependent oxidoreductase domain AMJAP_3226 IPR020471 Aldo/keto reductase AMJAP_3226 IPR036812 NADP-dependent oxidoreductase domain superfamily AMJAP_3227 IPR015947 PUA-like superfamily AMJAP_3227 IPR041532 RlmI, PUA-like domain AMJAP_3227 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_3227 IPR019614 S-adenosylmethionine-dependent methyltransferase AMJAP_3227 IPR002478 PUA domain AMJAP_3227 IPR036974 PUA domain superfamily AMJAP_3227 IPR023542 rRNA large subunit methyltransferase I AMJAP_3228 IPR017453 Glycine cleavage system H-protein, subgroup AMJAP_3228 IPR011053 Single hybrid motif AMJAP_3228 IPR033753 Glycine cleavage system H-protein/Simiate AMJAP_3228 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMJAP_3228 IPR000089 Biotin/lipoyl attachment AMJAP_3228 IPR002930 Glycine cleavage system H-protein AMJAP_3229 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal AMJAP_3229 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AMJAP_3229 IPR006222 Aminomethyltransferase, folate-binding domain AMJAP_3229 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain AMJAP_3229 IPR028896 Aminomethyltransferase-like AMJAP_3229 IPR022903 Glycine cleavage system T protein, bacteria AMJAP_3229 IPR006223 Glycine cleavage system T protein AMJAP_3230 IPR002938 FAD-binding domain AMJAP_3230 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_3230 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AMJAP_3230 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AMJAP_3231 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_3231 IPR002938 FAD-binding domain AMJAP_3231 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 AMJAP_3231 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site AMJAP_3232 IPR036005 Creatinase/aminopeptidase-like AMJAP_3232 IPR007865 Aminopeptidase P, N-terminal AMJAP_3232 IPR000994 Peptidase M24 AMJAP_3232 IPR001714 Peptidase M24, methionine aminopeptidase AMJAP_3232 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMJAP_3232 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AMJAP_3233 IPR011978 Uncharacterised protein family UPF0149 AMJAP_3233 IPR036255 YgfB-like superfamily AMJAP_3235 IPR007838 Cell division protein ZapA-like AMJAP_3235 IPR036192 Cell division protein ZapA-like superfamily AMJAP_3236 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMJAP_3236 IPR037171 NagB/RpiA transferase-like AMJAP_3236 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AMJAP_3239 IPR024083 Fumarase/histidase, N-terminal AMJAP_3239 IPR029419 Argininosuccinate lyase, C-terminal AMJAP_3239 IPR020557 Fumarate lyase, conserved site AMJAP_3239 IPR000362 Fumarate lyase family AMJAP_3239 IPR022761 Fumarate lyase, N-terminal AMJAP_3239 IPR009049 Argininosuccinate lyase AMJAP_3239 IPR008948 L-Aspartase-like AMJAP_3240 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily AMJAP_3240 IPR022418 Porphobilinogen deaminase, C-terminal AMJAP_3240 IPR022417 Porphobilinogen deaminase, N-terminal AMJAP_3240 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site AMJAP_3240 IPR000860 Porphobilinogen deaminase AMJAP_3241 IPR039793 Uroporphyrinogen-III synthase AMJAP_3241 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily AMJAP_3241 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase AMJAP_3242 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX AMJAP_3243 IPR011990 Tetratricopeptide-like helical domain superfamily AMJAP_3243 IPR013026 Tetratricopeptide repeat-containing domain AMJAP_3243 IPR010817 HemY, N-terminal AMJAP_3243 IPR013105 Tetratricopeptide repeat 2 AMJAP_3243 IPR019734 Tetratricopeptide repeat AMJAP_3243 IPR005254 Heme biosynthesis-associated TPR protein AMJAP_3245 IPR017938 Riboflavin synthase-like beta-barrel AMJAP_3245 IPR017927 FAD-binding domain, ferredoxin reductase-type AMJAP_3245 IPR001433 Oxidoreductase FAD/NAD(P)-binding AMJAP_3245 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AMJAP_3246 IPR002830 UbiD decarboxylyase family AMJAP_3246 IPR023677 UbiD decarboxylyase, bacteria AMJAP_3247 IPR036269 Rho termination factor, N-terminal domain superfamily AMJAP_3247 IPR011112 Rho termination factor, N-terminal AMJAP_3247 IPR041703 Transcription termination factor Rho, ATP binding domain AMJAP_3247 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3247 IPR004665 Transcription termination factor Rho AMJAP_3247 IPR011129 Cold shock domain AMJAP_3247 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMJAP_3247 IPR003593 AAA+ ATPase domain AMJAP_3247 IPR011113 Rho termination factor, RNA-binding domain AMJAP_3247 IPR012340 Nucleic acid-binding, OB-fold AMJAP_3248 IPR005746 Thioredoxin AMJAP_3248 IPR017937 Thioredoxin, conserved site AMJAP_3248 IPR013766 Thioredoxin domain AMJAP_3248 IPR036249 Thioredoxin-like superfamily AMJAP_3249 IPR030673 Pyrophosphatase, GppA/Ppx-type AMJAP_3249 IPR003695 Ppx/GppA phosphatase AMJAP_3249 IPR022371 Exopolyphosphatase AMJAP_3250 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal AMJAP_3250 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal AMJAP_3250 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising AMJAP_3250 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site AMJAP_3251 IPR016153 Heat shock protein Hsp33, N-terminal AMJAP_3251 IPR000397 Heat shock protein Hsp33 AMJAP_3251 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily AMJAP_3251 IPR016154 Heat shock protein Hsp33, C-terminal AMJAP_3252 IPR002942 RNA-binding S4 domain AMJAP_3252 IPR025708 Heat shock protein 15 AMJAP_3252 IPR036986 RNA-binding S4 domain superfamily AMJAP_3253 IPR036412 HAD-like superfamily AMJAP_3253 IPR023214 HAD superfamily AMJAP_3253 IPR041492 Haloacid dehalogenase-like hydrolase AMJAP_3253 IPR006439 HAD hydrolase, subfamily IA AMJAP_3254 IPR020084 NUDIX hydrolase, conserved site AMJAP_3254 IPR000086 NUDIX hydrolase domain AMJAP_3254 IPR015797 NUDIX hydrolase-like domain superfamily AMJAP_3255 IPR000760 Inositol monophosphatase-like AMJAP_3255 IPR020583 Inositol monophosphatase, metal-binding site AMJAP_3255 IPR020550 Inositol monophosphatase, conserved site AMJAP_3255 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ AMJAP_3257 IPR019833 Manganese/iron superoxide dismutase, binding site AMJAP_3257 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily AMJAP_3257 IPR019831 Manganese/iron superoxide dismutase, N-terminal AMJAP_3257 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily AMJAP_3257 IPR019832 Manganese/iron superoxide dismutase, C-terminal AMJAP_3257 IPR001189 Manganese/iron superoxide dismutase AMJAP_3258 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_3258 IPR005467 Histidine kinase domain AMJAP_3258 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_3258 IPR007895 MASE1 AMJAP_3258 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain AMJAP_3259 IPR013830 SGNH hydrolase-type esterase domain AMJAP_3259 IPR036514 SGNH hydrolase superfamily AMJAP_3260 IPR017871 ABC transporter, conserved site AMJAP_3260 IPR003439 ABC transporter-like AMJAP_3260 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3260 IPR003593 AAA+ ATPase domain AMJAP_3261 IPR038766 Membrane component of ABC transporter, predicted AMJAP_3263 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup AMJAP_3263 IPR037171 NagB/RpiA transferase-like AMJAP_3263 IPR004788 Ribose 5-phosphate isomerase, type A AMJAP_3264 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMJAP_3264 IPR038110 Threonine dehydratase, ACT-like domain superfamily AMJAP_3264 IPR001721 Threonine dehydratase, ACT-like domain AMJAP_3264 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site AMJAP_3264 IPR001926 Pyridoxal-phosphate dependent enzyme AMJAP_3264 IPR005787 Threonine dehydratase, biosynthetic AMJAP_3272 IPR002197 DNA binding HTH domain, Fis-type AMJAP_3272 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3272 IPR009057 Homeobox-like domain superfamily AMJAP_3272 IPR011006 CheY-like superfamily AMJAP_3272 IPR003593 AAA+ ATPase domain AMJAP_3272 IPR001789 Signal transduction response regulator, receiver domain AMJAP_3272 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_3272 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_3272 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_3272 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_3273 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_3273 IPR004681 TRAP transporter large membrane protein DctM AMJAP_3274 IPR007387 TRAP transporter, small membrane protein DctQ AMJAP_3275 IPR038404 TRAP transporter solute receptor DctP superfamily AMJAP_3275 IPR004682 TRAP transporter solute receptor, DctP family AMJAP_3275 IPR018389 TRAP transporter solute receptor DctP/TeaA AMJAP_3276 IPR004090 Chemotaxis methyl-accepting receptor AMJAP_3276 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_3276 IPR003660 HAMP domain AMJAP_3277 IPR002078 RNA polymerase sigma factor 54 interaction domain AMJAP_3277 IPR001789 Signal transduction response regulator, receiver domain AMJAP_3277 IPR025944 Sigma-54 interaction domain, conserved site AMJAP_3277 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3277 IPR002197 DNA binding HTH domain, Fis-type AMJAP_3277 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 AMJAP_3277 IPR003593 AAA+ ATPase domain AMJAP_3277 IPR011006 CheY-like superfamily AMJAP_3277 IPR009057 Homeobox-like domain superfamily AMJAP_3277 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AMJAP_3278 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_3278 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_3278 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_3278 IPR005467 Histidine kinase domain AMJAP_3278 IPR029151 Periplasmic sensor-like domain superfamily AMJAP_3278 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) AMJAP_3278 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_3278 IPR033479 Double Cache domain 1 AMJAP_3278 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_3279 IPR011037 Pyruvate kinase-like, insert domain superfamily AMJAP_3279 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily AMJAP_3279 IPR015793 Pyruvate kinase, barrel AMJAP_3279 IPR018209 Pyruvate kinase, active site AMJAP_3279 IPR015795 Pyruvate kinase, C-terminal AMJAP_3279 IPR001697 Pyruvate kinase AMJAP_3279 IPR015806 Pyruvate kinase, insert domain superfamily AMJAP_3279 IPR040442 Pyruvate kinase-like domain superfamily AMJAP_3279 IPR036918 Pyruvate kinase, C-terminal domain superfamily AMJAP_3280 IPR006334 Glutamate--cysteine ligase, monofunctional AMJAP_3280 IPR007370 Glutamate--cysteine ligase AMJAP_3280 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain AMJAP_3282 IPR038309 Rsd/AlgQ superfamily AMJAP_3282 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AMJAP_3284 IPR007894 MASE2 AMJAP_3284 IPR000160 GGDEF domain AMJAP_3284 IPR029787 Nucleotide cyclase AMJAP_3286 IPR003439 ABC transporter-like AMJAP_3286 IPR003593 AAA+ ATPase domain AMJAP_3286 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3286 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type AMJAP_3286 IPR017871 ABC transporter, conserved site AMJAP_3287 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AMJAP_3287 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_3287 IPR035906 MetI-like superfamily AMJAP_3288 IPR035906 MetI-like superfamily AMJAP_3288 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_3288 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain AMJAP_3289 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMJAP_3289 IPR018313 Solute-binding protein family 3, conserved site AMJAP_3290 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal AMJAP_3290 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AMJAP_3290 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily AMJAP_3292 IPR003439 ABC transporter-like AMJAP_3292 IPR032781 ABC-transporter extension domain AMJAP_3292 IPR003593 AAA+ ATPase domain AMJAP_3292 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3292 IPR017871 ABC transporter, conserved site AMJAP_3294 IPR000101 Gamma-glutamyltranspeptidase AMJAP_3294 IPR029055 Nucleophile aminohydrolases, N-terminal AMJAP_3295 IPR036291 NAD(P)-binding domain superfamily AMJAP_3295 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) AMJAP_3295 IPR002347 Short-chain dehydrogenase/reductase SDR AMJAP_3296 IPR029787 Nucleotide cyclase AMJAP_3296 IPR001789 Signal transduction response regulator, receiver domain AMJAP_3296 IPR000160 GGDEF domain AMJAP_3296 IPR011006 CheY-like superfamily AMJAP_3297 IPR008076 Cyanate hydratase AMJAP_3297 IPR036581 Cyanate lyase, C-terminal domain superfamily AMJAP_3297 IPR010982 Lambda repressor-like, DNA-binding domain superfamily AMJAP_3297 IPR003712 Cyanate lyase, C-terminal AMJAP_3298 IPR011009 Protein kinase-like domain superfamily AMJAP_3298 IPR005543 PASTA domain AMJAP_3298 IPR000719 Protein kinase domain AMJAP_3298 IPR017441 Protein kinase, ATP binding site AMJAP_3298 IPR008271 Serine/threonine-protein kinase, active site AMJAP_3300 IPR023031 Orotate phosphoribosyltransferase AMJAP_3300 IPR004467 Orotate phosphoribosyl transferase domain AMJAP_3300 IPR000836 Phosphoribosyltransferase domain AMJAP_3300 IPR029057 Phosphoribosyltransferase-like AMJAP_3301 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AMJAP_3301 IPR005135 Endonuclease/exonuclease/phosphatase AMJAP_3301 IPR020848 AP endonuclease 1, conserved site AMJAP_3301 IPR020847 AP endonuclease 1, binding site AMJAP_3301 IPR004808 AP endonuclease 1 AMJAP_3302 IPR036345 Exoribonuclease, PH domain 2 superfamily AMJAP_3302 IPR027408 PNPase/RNase PH domain superfamily AMJAP_3302 IPR002381 Ribonuclease PH, bacterial-type AMJAP_3302 IPR018336 Ribonuclease PH, conserved site AMJAP_3302 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_3302 IPR015847 Exoribonuclease, phosphorolytic domain 2 AMJAP_3302 IPR001247 Exoribonuclease, phosphorolytic domain 1 AMJAP_3303 IPR013527 YicC-like, N-terminal AMJAP_3303 IPR013551 Domain of unknown function DUF1732 AMJAP_3303 IPR005229 Conserved hypothetical protein CHP00255 AMJAP_3304 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMJAP_3304 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3304 IPR020590 Guanylate kinase, conserved site AMJAP_3304 IPR008144 Guanylate kinase-like domain AMJAP_3304 IPR017665 Guanylate kinase AMJAP_3305 IPR003716 DNA-directed RNA polymerase, omega subunit AMJAP_3305 IPR006110 RNA polymerase, subunit omega/K/RPB6 AMJAP_3305 IPR012293 RNA polymerase subunit, RPB6/omega AMJAP_3305 IPR036161 RPB6/omega subunit-like superfamily AMJAP_3306 IPR002912 ACT domain AMJAP_3306 IPR012675 Beta-grasp domain superfamily AMJAP_3306 IPR003607 HD/PDEase domain AMJAP_3306 IPR033655 RelA, TGS domain AMJAP_3306 IPR012676 TGS-like AMJAP_3306 IPR004811 RelA/SpoT family AMJAP_3306 IPR007685 RelA/SpoT AMJAP_3306 IPR004095 TGS AMJAP_3307 IPR019820 Sec-independent periplasmic protein translocase, conserved site AMJAP_3307 IPR002033 Sec-independent periplasmic protein translocase TatC AMJAP_3308 IPR018448 Twin-arginine translocation protein TatB AMJAP_3308 IPR003369 Sec-independent protein translocase protein TatA/B/E AMJAP_3309 IPR006312 Sec-independent protein translocase protein TatA/E AMJAP_3309 IPR003369 Sec-independent protein translocase protein TatA/B/E AMJAP_3310 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like AMJAP_3310 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase AMJAP_3311 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily AMJAP_3311 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain AMJAP_3311 IPR026660 Phosphoribosyl-AMP cyclohydrolase AMJAP_3312 IPR010232 Probable protein kinase UbiB AMJAP_3312 IPR011009 Protein kinase-like domain superfamily AMJAP_3312 IPR004147 UbiB domain AMJAP_3313 IPR000160 GGDEF domain AMJAP_3313 IPR029787 Nucleotide cyclase AMJAP_3315 IPR024167 Cytochrome c4-like AMJAP_3315 IPR009056 Cytochrome c-like domain AMJAP_3315 IPR036909 Cytochrome c-like domain superfamily AMJAP_3316 IPR030393 EngB-type guanine nucleotide-binding (G) domain AMJAP_3316 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC AMJAP_3316 IPR006073 GTP binding domain AMJAP_3316 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3317 IPR002298 DNA polymerase A AMJAP_3317 IPR019760 DNA-directed DNA polymerase, family A, conserved site AMJAP_3317 IPR036397 Ribonuclease H superfamily AMJAP_3317 IPR002562 3'-5' exonuclease domain AMJAP_3317 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal AMJAP_3317 IPR002421 5'-3' exonuclease, N-terminal AMJAP_3317 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AMJAP_3317 IPR001098 DNA-directed DNA polymerase, family A, palm domain AMJAP_3317 IPR020045 DNA polymerase I-like, H3TH domain AMJAP_3317 IPR018320 DNA polymerase 1 AMJAP_3317 IPR012337 Ribonuclease H-like superfamily AMJAP_3317 IPR008918 Helix-hairpin-helix motif, class 2 AMJAP_3317 IPR029060 PIN-like domain superfamily AMJAP_3319 IPR002575 Aminoglycoside phosphotransferase AMJAP_3319 IPR005280 Homoserine kinase, type II AMJAP_3319 IPR011009 Protein kinase-like domain superfamily AMJAP_3320 IPR013986 DExx box DNA helicase domain superfamily AMJAP_3320 IPR005753 DNA helicase, ATP-dependent, UvrD type AMJAP_3320 IPR014017 UvrD-like DNA helicase, C-terminal AMJAP_3320 IPR000212 DNA helicase, UvrD/REP type AMJAP_3320 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3320 IPR014016 UvrD-like helicase, ATP-binding domain AMJAP_3320 IPR034739 UvrD/AddA helicase, N-terminal AMJAP_3321 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain AMJAP_3323 IPR024370 PBP domain AMJAP_3323 IPR011862 Phosphate binding protein AMJAP_3324 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_3324 IPR035906 MetI-like superfamily AMJAP_3324 IPR011864 Phosphate ABC transporter, permease protein PstC AMJAP_3325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like AMJAP_3325 IPR011864 Phosphate ABC transporter, permease protein PstC AMJAP_3325 IPR035906 MetI-like superfamily AMJAP_3326 IPR003593 AAA+ ATPase domain AMJAP_3326 IPR003439 ABC transporter-like AMJAP_3326 IPR017871 ABC transporter, conserved site AMJAP_3326 IPR015850 ABC transporter, phosphate import, PstB AMJAP_3326 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3326 IPR005670 Phosphate transport system permease protein 1 AMJAP_3327 IPR026022 PhoU domain AMJAP_3327 IPR038078 PhoU-like domain superfamily AMJAP_3327 IPR028366 Phosphate transport system protein PhoU AMJAP_3328 IPR029016 GAF-like domain superfamily AMJAP_3328 IPR013515 Phytochrome, central region AMJAP_3328 IPR001294 Phytochrome AMJAP_3328 IPR016132 Phytochrome chromophore attachment domain AMJAP_3328 IPR029787 Nucleotide cyclase AMJAP_3328 IPR000160 GGDEF domain AMJAP_3328 IPR035919 EAL domain superfamily AMJAP_3328 IPR003018 GAF domain AMJAP_3328 IPR001633 EAL domain AMJAP_3330 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily AMJAP_3330 IPR007440 Chorismate--pyruvate lyase AMJAP_3331 IPR039653 Prenyltransferase AMJAP_3331 IPR006370 4-hydroxybenzoate polyprenyltransferase-like AMJAP_3331 IPR000537 UbiA prenyltransferase family AMJAP_3331 IPR030470 UbiA prenyltransferase conserved site AMJAP_3332 IPR001789 Signal transduction response regulator, receiver domain AMJAP_3332 IPR039420 Transcriptional regulatory protein WalR-like AMJAP_3332 IPR011006 CheY-like superfamily AMJAP_3332 IPR001867 OmpR/PhoB-type DNA-binding domain AMJAP_3332 IPR016032 Signal transduction response regulator, C-terminal effector AMJAP_3332 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB AMJAP_3332 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_3333 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_3333 IPR005467 Histidine kinase domain AMJAP_3333 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain AMJAP_3333 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily AMJAP_3333 IPR000014 PAS domain AMJAP_3333 IPR035965 PAS domain superfamily AMJAP_3333 IPR013767 PAS fold AMJAP_3333 IPR021766 Phosphate regulon sensor protein PhoR AMJAP_3333 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR AMJAP_3333 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_3333 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_3334 IPR022985 Sulfate transporter CysZ AMJAP_3336 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site AMJAP_3336 IPR006162 Phosphopantetheine attachment site AMJAP_3336 IPR009081 Phosphopantetheine binding ACP domain AMJAP_3336 IPR015083 Polyketide synthase, docking domain AMJAP_3336 IPR016039 Thiolase-like AMJAP_3336 IPR042104 Polyketide synthase, dehydratase domain superfamily AMJAP_3336 IPR014030 Beta-ketoacyl synthase, N-terminal AMJAP_3336 IPR014031 Beta-ketoacyl synthase, C-terminal AMJAP_3336 IPR018201 Beta-ketoacyl synthase, active site AMJAP_3336 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AMJAP_3336 IPR036291 NAD(P)-binding domain superfamily AMJAP_3336 IPR011032 GroES-like superfamily AMJAP_3336 IPR013154 Alcohol dehydrogenase, N-terminal AMJAP_3336 IPR032821 Ketoacyl-synthetase, C-terminal extension AMJAP_3336 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMJAP_3336 IPR020843 Polyketide synthase, enoylreductase domain AMJAP_3336 IPR013968 Polyketide synthase, ketoreductase domain AMJAP_3336 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AMJAP_3336 IPR014043 Acyl transferase AMJAP_3336 IPR036736 ACP-like superfamily AMJAP_3336 IPR001227 Acyl transferase domain superfamily AMJAP_3336 IPR020806 Polyketide synthase, phosphopantetheine-binding domain AMJAP_3336 IPR020807 Polyketide synthase, dehydratase domain AMJAP_3338 IPR001789 Signal transduction response regulator, receiver domain AMJAP_3338 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain AMJAP_3338 IPR011006 CheY-like superfamily AMJAP_3338 IPR036641 HPT domain superfamily AMJAP_3338 IPR005467 Histidine kinase domain AMJAP_3338 IPR003594 Histidine kinase/HSP90-like ATPase AMJAP_3338 IPR036061 CheW-like domain superfamily AMJAP_3338 IPR002545 CheW-like domain AMJAP_3338 IPR004358 Signal transduction histidine kinase-related protein, C-terminal AMJAP_3338 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AMJAP_3339 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain AMJAP_3339 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain AMJAP_3339 IPR003660 HAMP domain AMJAP_3339 IPR004090 Chemotaxis methyl-accepting receptor AMJAP_3341 IPR011006 CheY-like superfamily AMJAP_3341 IPR001789 Signal transduction response regulator, receiver domain AMJAP_3342 IPR011006 CheY-like superfamily AMJAP_3342 IPR001789 Signal transduction response regulator, receiver domain AMJAP_3347 IPR004681 TRAP transporter large membrane protein DctM AMJAP_3347 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AMJAP_3348 IPR041722 Alpha-keto acid binding periplasmic protein AMJAP_3348 IPR026289 Solute binding protein, TakP-like AMJAP_3348 IPR018389 TRAP transporter solute receptor DctP/TeaA AMJAP_3348 IPR038404 TRAP transporter solute receptor DctP superfamily AMJAP_3349 IPR036388 Winged helix-like DNA-binding domain superfamily AMJAP_3349 IPR035472 RpiR-like, SIS domain AMJAP_3349 IPR000281 Helix-turn-helix protein RpiR AMJAP_3349 IPR009057 Homeobox-like domain superfamily AMJAP_3349 IPR003836 Glucokinase AMJAP_3349 IPR001347 Sugar isomerase (SIS) AMJAP_3351 IPR013785 Aldolase-type TIM barrel AMJAP_3351 IPR024188 Glutamate synthase large subunit-like protein AMJAP_3351 IPR002932 Glutamate synthase domain AMJAP_3351 IPR027283 Glutamate synthase large subunit-like protein, bacteria AMJAP_3354 IPR035490 GlmS/FrlB, SIS domain 2 AMJAP_3354 IPR035466 GlmS/AgaS, SIS domain 1 AMJAP_3354 IPR017932 Glutamine amidotransferase type 2 domain AMJAP_3354 IPR001347 Sugar isomerase (SIS) AMJAP_3354 IPR029055 Nucleophile aminohydrolases, N-terminal AMJAP_3354 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising AMJAP_3355 IPR001451 Hexapeptide repeat AMJAP_3355 IPR025877 MobA-like NTP transferase AMJAP_3355 IPR029044 Nucleotide-diphospho-sugar transferases AMJAP_3355 IPR011004 Trimeric LpxA-like superfamily AMJAP_3355 IPR018357 Hexapeptide transferase, conserved site AMJAP_3355 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase AMJAP_3355 IPR038009 GlmU, C-terminal LbH domain AMJAP_3357 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily AMJAP_3357 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit AMJAP_3357 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal AMJAP_3357 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal AMJAP_3357 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain AMJAP_3358 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3358 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal AMJAP_3358 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMJAP_3358 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AMJAP_3358 IPR005722 ATP synthase, F1 complex, beta subunit AMJAP_3358 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site AMJAP_3358 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AMJAP_3358 IPR003593 AAA+ ATPase domain AMJAP_3359 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site AMJAP_3359 IPR000131 ATP synthase, F1 complex, gamma subunit AMJAP_3359 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily AMJAP_3360 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily AMJAP_3360 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily AMJAP_3360 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain AMJAP_3360 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain AMJAP_3360 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain AMJAP_3360 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3360 IPR000793 ATP synthase, alpha subunit, C-terminal AMJAP_3360 IPR005294 ATP synthase, F1 complex, alpha subunit AMJAP_3360 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily AMJAP_3361 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily AMJAP_3361 IPR000711 ATPase, OSCP/delta subunit AMJAP_3361 IPR020781 ATPase, OSCP/delta subunit, conserved site AMJAP_3362 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast AMJAP_3362 IPR005864 ATP synthase, F0 complex, subunit b, bacterial AMJAP_3362 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily AMJAP_3363 IPR038662 F1F0 ATP synthase subunit C superfamily AMJAP_3363 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site AMJAP_3363 IPR000454 ATP synthase, F0 complex, subunit C AMJAP_3363 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast AMJAP_3363 IPR035921 F/V-ATP synthase subunit C superfamily AMJAP_3363 IPR002379 V-ATPase proteolipid subunit C-like domain AMJAP_3364 IPR000568 ATP synthase, F0 complex, subunit A AMJAP_3364 IPR023011 ATP synthase, F0 complex, subunit A, active site AMJAP_3364 IPR035908 ATP synthase, F0 complex, subunit A superfamily AMJAP_3366 IPR036086 ParB/Sulfiredoxin superfamily AMJAP_3366 IPR003115 ParB/Sulfiredoxin AMJAP_3366 IPR004437 ParB/RepB/Spo0J partition protein AMJAP_3366 IPR041468 ParB/Spo0J, HTH domain AMJAP_3367 IPR025669 AAA domain AMJAP_3367 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3368 IPR003682 rRNA small subunit methyltransferase G AMJAP_3368 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMJAP_3369 IPR036188 FAD/NAD(P)-binding domain superfamily AMJAP_3369 IPR026904 GidA associated domain 3 AMJAP_3369 IPR020595 MnmG-related, conserved site AMJAP_3369 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related AMJAP_3369 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG AMJAP_3370 IPR013766 Thioredoxin domain AMJAP_3370 IPR017937 Thioredoxin, conserved site AMJAP_3370 IPR036249 Thioredoxin-like superfamily AMJAP_3370 IPR005746 Thioredoxin AMJAP_3371 IPR004520 tRNA modification GTPase MnmE AMJAP_3371 IPR006073 GTP binding domain AMJAP_3371 IPR025867 MnmE, helical domain AMJAP_3371 IPR018948 GTP-binding protein TrmE, N-terminal AMJAP_3371 IPR031168 TrmE-type guanine nucleotide-binding domain AMJAP_3371 IPR027368 tRNA modification GTPase MnmE domain 2 AMJAP_3371 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMJAP_3371 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 AMJAP_3371 IPR005225 Small GTP-binding protein domain AMJAP_3372 IPR038210 Membrane insertase YidC, periplasmic domain AMJAP_3372 IPR028053 Membrane insertase YidC, N-terminal AMJAP_3372 IPR038221 YidC, periplasmic domain superfamily AMJAP_3372 IPR019998 Membrane insertase YidC AMJAP_3372 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AMJAP_3372 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 AMJAP_3373 IPR020539 Ribonuclease P, conserved site AMJAP_3373 IPR000100 Ribonuclease P AMJAP_3373 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMJAP_3373 IPR020568 Ribosomal protein S5 domain 2-type fold AMJAP_3374 IPR000271 Ribosomal protein L34 AMJAP_3374 IPR020939 Ribosomal protein L34, conserved site