locus-tag	class	description
AJAP_00015	COG0592	DNA-directed DNA polymerase activity
AJAP_00020	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AJAP_00025	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AJAP_00030	COG5512	Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives
AJAP_00035	COG0187	DNA topoisomerase II activity
AJAP_00090	COG0789	Transcriptional regulator
AJAP_00150	COG0705	Rhomboid family
AJAP_00150	COG0457	Tetratricopeptide repeat
AJAP_00170	COG3764	Sortase (surface protein transpeptidase)
AJAP_00195	COG1131	(ABC) transporter
AJAP_00240	COG0515	serine threonine protein kinase
AJAP_00245	COG0768	penicillin binding
AJAP_00260	COG1716	ATPase activity
AJAP_00265	COG1716	ATPase activity
AJAP_00290	COG0626	cystathionine gamma-synthase activity
AJAP_00310	COG2186	Transcriptional regulator
AJAP_00315	COG0747	negative chemotaxis
AJAP_00330	COG0444	Belongs to the ABC transporter superfamily
AJAP_00340	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_00350	COG0154	amidase activity
AJAP_00370	COG2301	Belongs to the HpcH HpaI aldolase family
AJAP_00375	COG0515	serine threonine protein kinase
AJAP_00390	COG0702	epimerase
AJAP_00395	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AJAP_00460	COG2372	response to copper ion
AJAP_00460	COG1276	copper resistance
AJAP_00475	COG1174	glycine betaine transport
AJAP_00485	COG1174	glycine betaine transport
AJAP_00510	COG2226	methyltransferase
AJAP_00520	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AJAP_00540	COG0405	Gamma-glutamyltransferase
AJAP_00555	COG0477	Major facilitator Superfamily
AJAP_00570	COG1569	PIN domain
AJAP_00575	COG3311	Transcriptional regulator
AJAP_00580	COG4585	Histidine kinase
AJAP_00585	COG2197	response regulator
AJAP_00605	COG0438	transferase activity, transferring glycosyl groups
AJAP_00610	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AJAP_00670	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AJAP_00680	COG3275	phosphorelay sensor kinase activity
AJAP_00695	COG3279	Response regulator of the LytR AlgR family
AJAP_00705	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AJAP_00715	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AJAP_00760	COG1191	sigma factor activity
AJAP_00775	COG2235	arginine
AJAP_00840	COG1271	oxidase subunit
AJAP_00845	COG1294	oxidase, subunit
AJAP_00850	COG4988	ABC transporter
AJAP_00925	COG4715	Zinc finger, swim domain protein
AJAP_00940	COG1072	(Pantothenic acid kinase))
AJAP_00945	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
AJAP_00955	COG0406	alpha-ribazole phosphatase activity
AJAP_00990	COG0754	glutathionylspermidine amidase activity
AJAP_00995	COG3766	membrane
AJAP_01000	COG0596	Alpha beta hydrolase
AJAP_01005	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AJAP_01010	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AJAP_01025	COG0579	oxidoreductase
AJAP_01040	COG0477	Major facilitator Superfamily
AJAP_01065	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AJAP_01075	COG0438	transferase activity, transferring glycosyl groups
AJAP_01080	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AJAP_01115	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AJAP_01130	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_01135	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_01175	COG0561	phosphatase activity
AJAP_01180	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_01200	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AJAP_01215	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_01220	COG0277	FAD linked oxidase domain protein
AJAP_01230	COG1216	Glycosyl transferase, family 2
AJAP_01265	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AJAP_01270	COG1216	Glycosyl transferase, family 2
AJAP_01300	COG2089	acid synthase
AJAP_01305	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AJAP_01310	COG1086	Polysaccharide biosynthesis protein
AJAP_01315	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
AJAP_01325	COG0596	Alpha beta hydrolase
AJAP_01340	COG0604	alcohol dehydrogenase
AJAP_01340	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_01340	COG3321	synthase
AJAP_01345	COG2234	aminopeptidase activity
AJAP_01365	COG4941	Belongs to the sigma-70 factor family
AJAP_01370	COG3795	YCII-related domain
AJAP_01425	COG0504	CTP synthase activity
AJAP_01465	COG1672	PFAM Archaeal ATPase
AJAP_01465	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AJAP_01480	COG1522	sequence-specific DNA binding
AJAP_01500	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AJAP_01505	COG2186	Transcriptional regulator
AJAP_01525	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AJAP_01550	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AJAP_01595	COG1309	transcriptional regulator
AJAP_01600	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_01675	COG3559	Exporter of polyketide antibiotics
AJAP_01680	COG1131	(ABC) transporter
AJAP_01745	COG2175	clavaminate synthase activity
AJAP_01755	COG0287	Prephenate dehydrogenase
AJAP_01760	COG0446	pyridine nucleotide-disulphide oxidoreductase
AJAP_01760	COG1902	pentaerythritol trinitrate reductase activity
AJAP_01780	COG1846	Transcriptional regulator
AJAP_01820	COG2318	DinB family
AJAP_01855	COG0483	inositol monophosphate 1-phosphatase activity
AJAP_01860	COG0602	queuosine metabolic process
AJAP_01865	COG0720	synthase
AJAP_01905	COG0438	transferase activity, transferring glycosyl groups
AJAP_01930	COG0463	Glycosyl transferase, family 2
AJAP_01940	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AJAP_01950	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AJAP_02025	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AJAP_02035	COG0346	lactoylglutathione lyase activity
AJAP_02040	COG0400	carboxylic ester hydrolase activity
AJAP_02050	COG5416	Lipopolysaccharide assembly protein A domain
AJAP_02075	COG4399	Belongs to the UPF0754 family
AJAP_02080	COG1752	Esterase of the alpha-beta hydrolase superfamily
AJAP_02085	COG0456	acetyltransferase
AJAP_02095	COG1917	Cupin 2, conserved barrel domain protein
AJAP_02100	COG5285	phytanoyl-CoA dioxygenase
AJAP_02105	COG3629	intracellular signal transduction
AJAP_02105	COG3903	Transcriptional regulator
AJAP_02135	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AJAP_02145	COG2971	BadF BadG BcrA BcrD
AJAP_02150	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AJAP_02155	COG2188	Transcriptional regulator
AJAP_02160	COG0477	Major facilitator Superfamily
AJAP_02175	COG0352	thiamine-phosphate diphosphorylase activity
AJAP_02190	COG2022	thiamine diphosphate biosynthetic process
AJAP_02215	COG0351	phosphomethylpyrimidine kinase
AJAP_02220	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AJAP_02230	COG0242	peptide deformylase activity
AJAP_02245	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AJAP_02250	COG2826	transposase and inactivated derivatives, IS30 family
AJAP_02260	COG0688	phosphatidylethanolamine metabolic process
AJAP_02270	COG2261	transglycosylase associated protein
AJAP_02300	COG1278	Cold shock
AJAP_02310	COG0459	protein refolding
AJAP_02350	COG4948	Mandelate Racemase Muconate Lactonizing
AJAP_02355	COG3629	intracellular signal transduction
AJAP_02355	COG3903	Transcriptional regulator
AJAP_02375	COG1061	Type III restriction enzyme res subunit
AJAP_02395	COG3142	Participates in the control of copper homeostasis
AJAP_02405	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AJAP_02405	COG1116	anion transmembrane transporter activity
AJAP_02410	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AJAP_02415	COG1174	glycine betaine transport
AJAP_02435	COG2018	Roadblock/LC7 domain
AJAP_02450	COG2018	Roadblock/LC7 domain
AJAP_02485	COG0521	Mo-molybdopterin cofactor biosynthetic process
AJAP_02510	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AJAP_02515	COG1846	Transcriptional regulator
AJAP_02550	COG3304	Inner membrane component domain
AJAP_02555	COG0384	phenazine biosynthesis protein PhzF
AJAP_02560	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_02570	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AJAP_02590	COG1278	Cold shock
AJAP_02625	COG2252	PERMEase
AJAP_02635	COG2814	Major facilitator Superfamily
AJAP_02655	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_02690	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AJAP_02710	COG2205	protein histidine kinase activity
AJAP_02715	COG0745	RESPONSE REGULATOR receiver
AJAP_02735	COG1136	(ABC) transporter
AJAP_02735	COG0577	efflux transmembrane transporter activity
AJAP_02740	COG0577	efflux transmembrane transporter activity
AJAP_02740	COG1136	(ABC) transporter
AJAP_02745	COG5650	phosphatidylinositol metabolic process
AJAP_02760	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AJAP_02765	COG2197	response regulator
AJAP_02770	COG4585	Histidine kinase
AJAP_02780	COG1131	(ABC) transporter
AJAP_02820	COG0831	urea catabolic process
AJAP_02825	COG0832	Belongs to the urease beta subunit family
AJAP_02830	COG0804	urea catabolic process
AJAP_02840	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AJAP_02845	COG0829	nickel cation binding
AJAP_02875	COG0642	Histidine kinase
AJAP_02880	COG1116	anion transmembrane transporter activity
AJAP_02885	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AJAP_02890	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AJAP_02900	COG0259	pyridoxamine-phosphate oxidase activity
AJAP_02930	COG1309	transcriptional regulator
AJAP_02940	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_02945	COG2017	converts alpha-aldose to the beta-anomer
AJAP_02955	COG1228	amidohydrolase
AJAP_02970	COG1960	acyl-CoA dehydrogenase activity
AJAP_02990	COG0415	Belongs to the DNA photolyase family
AJAP_02995	COG1668	transmembrane transport
AJAP_03000	COG4152	abc transporter atp-binding protein
AJAP_03035	COG0277	FAD linked oxidase domain protein
AJAP_03095	COG1169	isochorismate synthase
AJAP_03105	COG1301	dicarboxylic acid transport
AJAP_03110	COG1960	acyl-CoA dehydrogenase activity
AJAP_03125	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_03130	COG1024	Enoyl-CoA hydratase
AJAP_03135	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AJAP_03145	COG1321	iron dependent repressor
AJAP_03160	COG3145	DNA-N1-methyladenine dioxygenase activity
AJAP_03165	COG1984	allophanate hydrolase subunit 2
AJAP_03170	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AJAP_03175	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AJAP_03200	COG1940	carbohydrate kinase activity
AJAP_03250	COG2755	lipolytic protein G-D-S-L family
AJAP_03250	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AJAP_03260	COG0583	DNA-binding transcription factor activity
AJAP_03265	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AJAP_03280	COG0789	Transcriptional regulator
AJAP_03285	COG4941	Belongs to the sigma-70 factor family
AJAP_03300	COG4221	oxidoreductase activity
AJAP_03335	COG3903	Transcriptional regulator
AJAP_03335	COG3629	intracellular signal transduction
AJAP_03370	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AJAP_03435	COG1104	cysteine desulfurase activity
AJAP_03450	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AJAP_03495	COG2197	response regulator
AJAP_03500	COG2860	membrane
AJAP_03510	COG2205	protein histidine kinase activity
AJAP_03520	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AJAP_03530	COG1349	DNA-binding transcription factor activity
AJAP_03570	COG2372	response to copper ion
AJAP_03570	COG1276	copper resistance
AJAP_03595	COG3794	PFAM blue (type 1) copper domain protein
AJAP_03605	COG0745	RESPONSE REGULATOR receiver
AJAP_03610	COG5002	protein histidine kinase activity
AJAP_03625	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AJAP_03630	COG0315	cyclic pyranopterin monophosphate synthase activity
AJAP_03630	COG0521	Mo-molybdopterin cofactor biosynthetic process
AJAP_03755	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AJAP_03765	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AJAP_03775	COG2226	methyltransferase
AJAP_03780	COG2409	Drug exporters of the RND superfamily
AJAP_03810	COG2197	response regulator
AJAP_03815	COG4585	Histidine kinase
AJAP_03835	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_03850	COG2258	MOSC domain
AJAP_03925	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AJAP_03930	COG0084	hydrolase, TatD family'
AJAP_03955	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AJAP_03960	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AJAP_03965	COG0488	(ABC) transporter
AJAP_03970	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_03985	COG0193	aminoacyl-tRNA hydrolase activity
AJAP_04015	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AJAP_04020	COG0745	RESPONSE REGULATOR receiver
AJAP_04020	COG3706	GGDEF domain
AJAP_04050	COG1335	isochorismatase
AJAP_04060	COG2133	pyrroloquinoline quinone binding
AJAP_04065	COG2197	response regulator
AJAP_04070	COG4585	Histidine kinase
AJAP_04080	COG0586	Pfam SNARE associated Golgi protein
AJAP_04090	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_04115	COG1733	regulation of RNA biosynthetic process
AJAP_04120	COG1595	DNA-templated transcription, initiation
AJAP_04130	COG1131	(ABC) transporter
AJAP_04150	COG2837	iron assimilation
AJAP_04160	COG0672	)-iron permease
AJAP_04170	COG3634	alkyl hydroperoxide reductase activity
AJAP_04190	COG0148	phosphopyruvate hydratase activity
AJAP_04215	COG4166	transmembrane transport
AJAP_04220	COG0601	transmembrane transport
AJAP_04230	COG0444	Belongs to the ABC transporter superfamily
AJAP_04235	COG4608	Belongs to the ABC transporter superfamily
AJAP_04240	COG1404	Belongs to the peptidase S8 family
AJAP_04260	COG1515	deoxyribonuclease V activity
AJAP_04270	COG1252	NADH dehydrogenase
AJAP_04290	COG0745	RESPONSE REGULATOR receiver
AJAP_04310	COG2197	response regulator
AJAP_04315	COG4585	Histidine kinase
AJAP_04340	COG0406	alpha-ribazole phosphatase activity
AJAP_04345	COG2124	cytochrome p450
AJAP_04360	COG1472	Belongs to the glycosyl hydrolase 3 family
AJAP_04385	COG1902	pentaerythritol trinitrate reductase activity
AJAP_04430	COG2391	methyltransferase activity
AJAP_04435	COG0477	Major facilitator Superfamily
AJAP_04440	COG0183	Belongs to the thiolase family
AJAP_04510	COG3185	4-Hydroxyphenylpyruvate dioxygenase
AJAP_04520	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AJAP_04525	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AJAP_04535	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AJAP_04545	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AJAP_04555	COG1331	Highly conserved protein containing a thioredoxin domain
AJAP_04580	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AJAP_04615	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AJAP_04660	COG1793	dna ligase
AJAP_04680	COG0114	fumarate hydratase activity
AJAP_04685	COG0492	ferredoxin-NADP+ reductase activity
AJAP_04700	COG1722	exodeoxyribonuclease VII activity
AJAP_04710	COG1570	exodeoxyribonuclease VII activity
AJAP_04720	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AJAP_04735	COG0420	3'-5' exonuclease activity
AJAP_04740	COG0419	ATPase involved in DNA repair
AJAP_04755	COG0012	GTP binding
AJAP_04810	COG2234	aminopeptidase activity
AJAP_04840	COG2154	pterin-4-alpha-carbinolamine dehydratase
AJAP_04850	COG4149	molybdate abc transporter
AJAP_04855	COG3842	ATPase activity
AJAP_04870	COG1131	(ABC) transporter
AJAP_04885	COG2205	protein histidine kinase activity
AJAP_04895	COG0180	Tryptophanyl-tRNA synthetase
AJAP_04915	COG0747	negative chemotaxis
AJAP_04925	COG0601	transmembrane transport
AJAP_04940	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AJAP_04955	COG1994	Peptidase M50
AJAP_04985	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AJAP_04990	COG2835	tetraacyldisaccharide 4'-kinase activity
AJAP_05000	COG1482	cell wall glycoprotein biosynthetic process
AJAP_05010	COG3629	intracellular signal transduction
AJAP_05010	COG3903	Transcriptional regulator
AJAP_05020	COG0531	amino acid
AJAP_05035	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AJAP_05060	COG4638	Rieske (2fe-2S)
AJAP_05065	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AJAP_05075	COG1414	Transcriptional regulator
AJAP_05080	COG2146	nitrite reductase [NAD(P)H] activity
AJAP_05090	COG0745	RESPONSE REGULATOR receiver
AJAP_05095	COG5002	protein histidine kinase activity
AJAP_05095	COG5000	phosphorelay sensor kinase activity
AJAP_05100	COG5401	PFAM Sporulation and spore germination
AJAP_05110	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AJAP_05115	COG0653	protein targeting
AJAP_05125	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AJAP_05130	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AJAP_05170	COG1162	GTPase activity
AJAP_05175	COG2135	peptidase activity
AJAP_05190	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AJAP_05215	COG1597	lipid kinase activity
AJAP_05230	COG0406	alpha-ribazole phosphatase activity
AJAP_05250	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
AJAP_05255	COG0281	malic enzyme
AJAP_05270	COG1174	glycine betaine transport
AJAP_05275	COG1174	glycine betaine transport
AJAP_05285	COG3153	acetyltransferase
AJAP_05305	COG0567	Dehydrogenase, E1 component
AJAP_05305	COG0508	dehydrogenase complex catalyzes the overall conversion of
AJAP_05325	COG1132	(ABC) transporter
AJAP_05360	COG3629	intracellular signal transduction
AJAP_05360	COG3903	Transcriptional regulator
AJAP_05365	COG0686	Belongs to the AlaDH PNT family
AJAP_05385	COG2508	Transcriptional regulator
AJAP_05385	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
AJAP_05390	COG1695	Transcriptional regulator
AJAP_05395	COG0346	lactoylglutathione lyase activity
AJAP_05405	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AJAP_05420	COG2755	lipolytic protein G-D-S-L family
AJAP_05425	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AJAP_05435	COG1960	acyl-CoA dehydrogenase activity
AJAP_05450	COG4221	oxidoreductase activity
AJAP_05465	COG1960	acyl-CoA dehydrogenase activity
AJAP_05485	COG0183	Belongs to the thiolase family
AJAP_05490	COG1250	3-hydroxyacyl-CoA dehydrogenase
AJAP_05490	COG1024	Enoyl-CoA hydratase
AJAP_05495	COG2409	Drug exporters of the RND superfamily
AJAP_05500	COG2197	response regulator
AJAP_05505	COG4585	Histidine kinase
AJAP_05520	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_05530	COG0477	Major facilitator Superfamily
AJAP_05535	COG0028	Belongs to the TPP enzyme family
AJAP_05550	COG3903	Transcriptional regulator
AJAP_05550	COG3629	intracellular signal transduction
AJAP_05575	COG0473	3-isopropylmalate dehydrogenase activity
AJAP_05605	COG0154	amidase activity
AJAP_05620	COG0667	Aldo Keto reductase
AJAP_05640	COG5424	Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
AJAP_05650	COG2133	pyrroloquinoline quinone binding
AJAP_05660	COG0435	Glutathione S-transferase
AJAP_05690	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_05700	COG3345	alpha-galactosidase
AJAP_05705	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AJAP_05750	COG2910	NAD(P)H-binding
AJAP_05765	COG1846	Transcriptional regulator
AJAP_05780	COG4941	Belongs to the sigma-70 factor family
AJAP_05800	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AJAP_05815	COG1053	succinate dehydrogenase
AJAP_05825	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AJAP_05830	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AJAP_05845	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AJAP_05850	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AJAP_05865	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_05900	COG2197	response regulator
AJAP_05920	COG1960	acyl-CoA dehydrogenase activity
AJAP_05925	COG0475	glutathione-regulated potassium exporter activity
AJAP_05960	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AJAP_05995	COG0596	Alpha beta hydrolase
AJAP_06015	COG0018	arginyl-trna synthetase
AJAP_06020	COG0019	diaminopimelate decarboxylase activity
AJAP_06025	COG0460	homoserine dehydrogenase
AJAP_06030	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AJAP_06035	COG0083	homoserine kinase activity
AJAP_06040	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AJAP_06040	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AJAP_06055	COG0254	rRNA binding
AJAP_06060	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AJAP_06085	COG0596	Alpha beta hydrolase
AJAP_06090	COG0789	Transcriptional regulator
AJAP_06095	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AJAP_06100	COG2890	protein-(glutamine-N5) methyltransferase activity
AJAP_06115	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AJAP_06125	COG0356	it plays a direct role in the translocation of protons across the membrane
AJAP_06130	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AJAP_06135	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AJAP_06140	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AJAP_06145	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AJAP_06150	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AJAP_06155	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AJAP_06160	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AJAP_06170	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AJAP_06185	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AJAP_06200	COG1280	lysine exporter protein (LysE YggA)
AJAP_06205	COG1280	lysine exporter protein (LysE YggA)
AJAP_06225	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AJAP_06230	COG0765	amino acid transport
AJAP_06235	COG0765	amino acid transport
AJAP_06240	COG1126	abc transporter atp-binding protein
AJAP_06250	COG4977	sequence-specific DNA binding
AJAP_06265	COG1637	Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
AJAP_06275	COG1752	Esterase of the alpha-beta hydrolase superfamily
AJAP_06315	COG2376	Dihydroxyacetone kinase
AJAP_06320	COG1461	Dihydroxyacetone kinase
AJAP_06330	COG2826	transposase and inactivated derivatives, IS30 family
AJAP_06350	COG1522	sequence-specific DNA binding
AJAP_06355	COG0626	cystathionine gamma-synthase activity
AJAP_06365	COG0668	transmembrane transport
AJAP_06385	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AJAP_06405	COG2267	carboxylic ester hydrolase activity
AJAP_06410	COG1819	glycosyl
AJAP_06420	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AJAP_06425	COG3830	Belongs to the UPF0237 family
AJAP_06425	COG0560	Phosphoserine phosphatase
AJAP_06465	COG0800	Aldolase
AJAP_06470	COG1335	isochorismatase
AJAP_06475	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AJAP_06490	COG3191	aminopeptidase activity
AJAP_06510	COG1794	racemase activity, acting on amino acids and derivatives
AJAP_06525	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AJAP_06535	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AJAP_06540	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AJAP_06650	COG1316	TRANSCRIPTIONal
AJAP_06665	COG3706	GGDEF domain
AJAP_06675	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_06695	COG3844	kynureninase activity
AJAP_06710	COG2018	Roadblock/LC7 domain
AJAP_06725	COG2259	Doxx family
AJAP_06730	COG2259	Doxx family
AJAP_06740	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AJAP_06775	COG1408	metallophosphoesterase
AJAP_06785	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AJAP_06825	COG3469	chitinase activity
AJAP_06835	COG0698	ribose 5-phosphate isomerase
AJAP_06855	COG2267	carboxylic ester hydrolase activity
AJAP_06860	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AJAP_06870	COG2814	Major facilitator Superfamily
AJAP_06875	COG0789	Transcriptional regulator
AJAP_06880	COG0673	inositol 2-dehydrogenase activity
AJAP_06905	COG1024	Enoyl-CoA hydratase
AJAP_06935	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AJAP_07025	COG4249	Peptidase C14 caspase catalytic subunit p20
AJAP_07025	COG2319	Wd-40 repeat
AJAP_07065	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AJAP_07090	COG3285	dna ligase
AJAP_07090	COG1793	dna ligase
AJAP_07105	COG0587	DNA-directed DNA polymerase activity
AJAP_07165	COG0789	Transcriptional regulator
AJAP_07190	COG0798	PFAM Bile acid sodium symporter
AJAP_07195	COG2072	flavoprotein involved in K transport
AJAP_07200	COG2234	aminopeptidase activity
AJAP_07215	COG0640	Transcriptional regulator
AJAP_07225	COG2072	flavoprotein involved in K transport
AJAP_07235	COG0492	ferredoxin-NADP+ reductase activity
AJAP_07260	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AJAP_07455	COG0791	NLP P60 protein
AJAP_07525	COG4974	Belongs to the 'phage' integrase family
AJAP_07545	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AJAP_07550	COG0433	COG0433 Predicted ATPase
AJAP_07560	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AJAP_07570	COG2226	methyltransferase
AJAP_07575	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AJAP_07585	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AJAP_07590	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AJAP_07625	COG0183	Belongs to the thiolase family
AJAP_07650	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_07655	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AJAP_07665	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AJAP_07675	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AJAP_07685	COG3279	Response regulator of the LytR AlgR family
AJAP_07690	COG3275	phosphorelay sensor kinase activity
AJAP_07720	COG1609	Transcriptional regulator
AJAP_07725	COG3537	Alpha-1,2-mannosidase
AJAP_07735	COG1846	Transcriptional regulator
AJAP_07760	COG0058	SHG alpha-glucan phosphorylase activity
AJAP_07800	COG1119	ATPase activity
AJAP_07805	COG1024	Enoyl-CoA hydratase
AJAP_07810	COG2226	methyltransferase
AJAP_07905	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AJAP_07930	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
AJAP_07940	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AJAP_07955	COG1595	DNA-templated transcription, initiation
AJAP_07960	COG1252	NADH dehydrogenase
AJAP_07975	COG1309	transcriptional regulator
AJAP_07990	COG3883	PFAM NLP P60 protein
AJAP_07990	COG0791	NLP P60 protein
AJAP_07995	COG1957	nucleoside hydrolase
AJAP_08000	COG0110	maltose O-acetyltransferase activity
AJAP_08065	COG0386	Belongs to the glutathione peroxidase family
AJAP_08075	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AJAP_08085	COG1307	EDD domain protein, DegV family
AJAP_08095	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AJAP_08130	COG0482	sulfurtransferase activity
AJAP_08135	COG0456	acetyltransferase
AJAP_08140	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AJAP_08160	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AJAP_08175	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AJAP_08180	COG0154	amidase activity
AJAP_08225	COG0129	dihydroxy-acid dehydratase activity
AJAP_08240	COG0440	acetolactate synthase activity
AJAP_08245	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
AJAP_08290	COG1404	Belongs to the peptidase S8 family
AJAP_08295	COG0473	3-isopropylmalate dehydrogenase activity
AJAP_08300	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AJAP_08305	COG0179	Fumarylacetoacetate (FAA) hydrolase
AJAP_08340	COG1063	alcohol dehydrogenase
AJAP_08370	COG0640	Transcriptional regulator
AJAP_08415	COG0583	DNA-binding transcription factor activity
AJAP_08430	COG0019	diaminopimelate decarboxylase activity
AJAP_08435	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AJAP_08440	COG0534	Mate efflux family protein
AJAP_08455	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
AJAP_08475	COG1366	Belongs to the anti-sigma-factor antagonist family
AJAP_08545	COG0714	Associated with various cellular activities
AJAP_08595	COG1674	ftsk spoiiie
AJAP_08645	COG2205	protein histidine kinase activity
AJAP_08650	COG0745	RESPONSE REGULATOR receiver
AJAP_08660	COG0464	growth
AJAP_08665	COG0745	RESPONSE REGULATOR receiver
AJAP_08675	COG1414	Transcriptional regulator
AJAP_08680	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AJAP_08685	COG0066	3-isopropylmalate dehydratase activity
AJAP_08690	COG0776	regulation of translation
AJAP_08715	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AJAP_08735	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AJAP_08760	COG0745	RESPONSE REGULATOR receiver
AJAP_08765	COG2205	protein histidine kinase activity
AJAP_08775	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_08810	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AJAP_08815	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AJAP_08820	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AJAP_08825	COG1461	Dihydroxyacetone kinase
AJAP_08870	COG1404	Belongs to the peptidase S8 family
AJAP_08875	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AJAP_08930	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AJAP_08955	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AJAP_08965	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_08970	COG2319	Wd-40 repeat
AJAP_08970	COG4249	Peptidase C14 caspase catalytic subunit p20
AJAP_08975	COG3973	AAA domain
AJAP_08980	COG0742	ribosomal rna small subunit methyltransferase
AJAP_08985	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AJAP_09025	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AJAP_09030	COG0571	ribonuclease III activity
AJAP_09040	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AJAP_09070	COG1131	(ABC) transporter
AJAP_09075	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_09095	COG0174	glutamine synthetase
AJAP_09100	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AJAP_09105	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_09115	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AJAP_09115	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AJAP_09120	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AJAP_09125	COG0509	glycine decarboxylation via glycine cleavage system
AJAP_09130	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AJAP_09135	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AJAP_09140	COG1760	l-serine dehydratase
AJAP_09145	COG2186	Transcriptional regulator
AJAP_09150	COG0659	secondary active sulfate transmembrane transporter activity
AJAP_09160	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AJAP_09170	COG1120	ATPase activity
AJAP_09175	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_09185	COG4221	oxidoreductase activity
AJAP_09200	COG2814	Major facilitator Superfamily
AJAP_09205	COG0179	Fumarylacetoacetate (FAA) hydrolase
AJAP_09210	COG4948	Mandelate Racemase Muconate Lactonizing
AJAP_09215	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_09220	COG1879	ABC-type sugar transport system periplasmic component
AJAP_09225	COG1129	ABC transporter
AJAP_09230	COG1172	Belongs to the binding-protein-dependent transport system permease family
AJAP_09235	COG2186	Transcriptional regulator
AJAP_09265	COG2149	membrane
AJAP_09285	COG1929	Belongs to the glycerate kinase type-1 family
AJAP_09315	COG0446	pyridine nucleotide-disulphide oxidoreductase
AJAP_09315	COG1902	pentaerythritol trinitrate reductase activity
AJAP_09320	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AJAP_09325	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AJAP_09335	COG3485	protocatechuate 3,4-dioxygenase
AJAP_09340	COG3485	protocatechuate 3,4-dioxygenase
AJAP_09345	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AJAP_09350	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AJAP_09355	COG1414	Transcriptional regulator
AJAP_09370	COG0667	Aldo Keto reductase
AJAP_09395	COG1522	sequence-specific DNA binding
AJAP_09400	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AJAP_09425	COG0492	ferredoxin-NADP+ reductase activity
AJAP_09455	COG3962	Belongs to the TPP enzyme family
AJAP_09460	COG3718	enzyme involved in inositol metabolism
AJAP_09465	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AJAP_09485	COG1082	Xylose isomerase domain protein TIM barrel
AJAP_09490	COG1609	Transcriptional regulator
AJAP_09495	COG0673	inositol 2-dehydrogenase activity
AJAP_09505	COG3903	Transcriptional regulator
AJAP_09505	COG3629	intracellular signal transduction
AJAP_09510	COG1725	Transcriptional regulator
AJAP_09515	COG1131	(ABC) transporter
AJAP_09530	COG0367	asparagine synthase
AJAP_09540	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
AJAP_09545	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
AJAP_09550	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
AJAP_09585	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AJAP_09595	COG0477	Major facilitator Superfamily
AJAP_09605	COG1414	Transcriptional regulator
AJAP_09640	COG3835	regulator
AJAP_09660	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AJAP_09665	COG0590	tRNA wobble adenosine to inosine editing
AJAP_09670	COG2252	PERMEase
AJAP_09685	COG1309	transcriptional regulator
AJAP_09700	COG2351	hydroxyisourate hydrolase activity
AJAP_09715	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AJAP_09720	COG4266	Belongs to the allantoicase family
AJAP_09730	COG1832	CoA-binding protein
AJAP_09790	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AJAP_09800	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AJAP_09850	COG0228	four-way junction DNA binding
AJAP_09865	COG0336	Belongs to the RNA methyltransferase TrmD family
AJAP_09870	COG0335	large ribosomal subunit rRNA binding
AJAP_09875	COG0681	Belongs to the peptidase S26 family
AJAP_09880	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AJAP_09895	COG0606	chelatase, subunit chli
AJAP_09910	COG1191	sigma factor activity
AJAP_09920	COG0052	Belongs to the universal ribosomal protein uS2 family
AJAP_09925	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AJAP_09930	COG0528	UMP kinase activity
AJAP_09955	COG1695	Transcriptional regulator
AJAP_09980	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AJAP_10060	COG3540	Alkaline phosphatase
AJAP_10070	COG1476	TRANSCRIPTIONal
AJAP_10095	COG2124	cytochrome p450
AJAP_10105	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_10115	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AJAP_10115	COG2755	lipolytic protein G-D-S-L family
AJAP_10130	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AJAP_10145	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AJAP_10150	COG0750	zinc metalloprotease
AJAP_10155	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AJAP_10160	COG0454	-acetyltransferase
AJAP_10160	COG0456	acetyltransferase
AJAP_10165	COG0768	penicillin binding
AJAP_10175	COG2186	Transcriptional regulator
AJAP_10180	COG2807	transmembrane transport
AJAP_10210	COG0156	8-amino-7-oxononanoate synthase activity
AJAP_10215	COG0513	Belongs to the DEAD box helicase family
AJAP_10230	COG1404	Belongs to the peptidase S8 family
AJAP_10250	COG3022	response to hydroperoxide
AJAP_10255	COG0456	acetyltransferase
AJAP_10280	COG0442	prolyl-tRNA aminoacylation
AJAP_10290	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AJAP_10325	COG1396	sequence-specific DNA binding
AJAP_10335	COG2197	response regulator
AJAP_10370	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AJAP_10375	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AJAP_10380	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AJAP_10385	COG0095	Lipoate-protein ligase
AJAP_10395	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AJAP_10420	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AJAP_10435	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AJAP_10450	COG0668	transmembrane transport
AJAP_10455	COG3201	nicotinamide mononucleotide transporter
AJAP_10465	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AJAP_10505	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_10510	COG3226	Transcriptional regulator
AJAP_10555	COG1113	amino acid transport
AJAP_10580	COG0587	DNA-directed DNA polymerase activity
AJAP_10585	COG0477	Major facilitator Superfamily
AJAP_10610	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AJAP_10620	COG1752	Esterase of the alpha-beta hydrolase superfamily
AJAP_10625	COG0586	Pfam SNARE associated Golgi protein
AJAP_10630	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AJAP_10635	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_10645	COG1309	transcriptional regulator
AJAP_10660	COG0321	lipoyl(octanoyl) transferase activity
AJAP_10670	COG1090	epimerase
AJAP_10685	COG0508	dehydrogenase complex catalyzes the overall conversion of
AJAP_10690	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AJAP_10705	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AJAP_10725	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AJAP_10735	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AJAP_10750	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AJAP_10760	COG0667	Aldo Keto reductase
AJAP_10800	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AJAP_10810	COG0697	spore germination
AJAP_10845	COG1845	cytochrome c oxidase, subunit III
AJAP_10860	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AJAP_10895	COG0438	transferase activity, transferring glycosyl groups
AJAP_10910	COG2124	cytochrome p450
AJAP_10915	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AJAP_10920	COG0659	secondary active sulfate transmembrane transporter activity
AJAP_10925	COG0659	secondary active sulfate transmembrane transporter activity
AJAP_10930	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AJAP_10950	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AJAP_10960	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AJAP_10965	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AJAP_10975	COG1404	Belongs to the peptidase S8 family
AJAP_11020	COG3896	Chloramphenicol phosphotransferase-like protein
AJAP_11050	COG1674	ftsk spoiiie
AJAP_11100	COG2197	response regulator
AJAP_11105	COG3386	PFAM SMP-30 Gluconolaconase
AJAP_11110	COG1522	sequence-specific DNA binding
AJAP_11120	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AJAP_11125	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AJAP_11130	COG0131	Imidazoleglycerol-phosphate dehydratase
AJAP_11155	COG2409	Drug exporters of the RND superfamily
AJAP_11160	COG1309	transcriptional regulator
AJAP_11170	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
AJAP_11180	COG3959	Transketolase, thiamine diphosphate binding domain
AJAP_11185	COG3958	Transketolase
AJAP_11195	COG1960	acyl-CoA dehydrogenase activity
AJAP_11205	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AJAP_11210	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AJAP_11235	COG0604	alcohol dehydrogenase
AJAP_11235	COG3321	synthase
AJAP_11235	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_11255	COG1309	transcriptional regulator
AJAP_11260	COG0107	imidazoleglycerol-phosphate synthase activity
AJAP_11270	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AJAP_11295	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AJAP_11305	COG0134	indole-3-glycerol-phosphate synthase activity
AJAP_11310	COG0133	tryptophan synthase activity
AJAP_11315	COG0159	tryptophan synthase activity
AJAP_11325	COG0174	glutamine synthetase
AJAP_11340	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AJAP_11355	COG0069	glutamate synthase activity
AJAP_11355	COG0070	glutamate synthase
AJAP_11355	COG0067	glutamate synthase
AJAP_11380	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
AJAP_11390	COG2318	DinB family
AJAP_11400	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AJAP_11435	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AJAP_11440	COG1799	cell septum assembly
AJAP_11450	COG3599	regulation of cell shape
AJAP_11475	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AJAP_11485	COG0640	Transcriptional regulator
AJAP_11500	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AJAP_11510	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AJAP_11530	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_11535	COG0248	Ppx GppA phosphatase
AJAP_11555	COG1309	transcriptional regulator
AJAP_11570	COG1940	carbohydrate kinase activity
AJAP_11585	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AJAP_11585	COG2010	Cytochrome c
AJAP_11620	COG0667	Aldo Keto reductase
AJAP_11630	COG0477	Major facilitator Superfamily
AJAP_11635	COG0542	response to heat
AJAP_11655	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AJAP_11665	COG0514	ATP-dependent DNA helicase (RecQ)
AJAP_11670	COG0640	Transcriptional regulator
AJAP_11725	COG1051	belongs to the nudix hydrolase family
AJAP_11730	COG0596	Alpha beta hydrolase
AJAP_11745	COG0640	Transcriptional regulator
AJAP_11760	COG0789	Transcriptional regulator
AJAP_11785	COG3903	Transcriptional regulator
AJAP_11785	COG3629	intracellular signal transduction
AJAP_11795	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AJAP_11805	COG1280	lysine exporter protein (LysE YggA)
AJAP_11835	COG1595	DNA-templated transcription, initiation
AJAP_11870	COG1302	Protein conserved in bacteria
AJAP_11880	COG4585	Histidine kinase
AJAP_11885	COG2197	response regulator
AJAP_11890	COG1785	Belongs to the alkaline phosphatase family
AJAP_11925	COG2172	sigma factor antagonist activity
AJAP_11930	COG1366	Belongs to the anti-sigma-factor antagonist family
AJAP_11935	COG1366	Belongs to the anti-sigma-factor antagonist family
AJAP_11970	COG0596	Alpha beta hydrolase
AJAP_11990	COG0446	pyridine nucleotide-disulphide oxidoreductase
AJAP_11990	COG1902	pentaerythritol trinitrate reductase activity
AJAP_12015	COG2197	response regulator
AJAP_12095	COG1522	sequence-specific DNA binding
AJAP_12100	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
AJAP_12130	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AJAP_12135	COG1609	Transcriptional regulator
AJAP_12155	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AJAP_12190	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AJAP_12195	COG1082	Xylose isomerase domain protein TIM barrel
AJAP_12280	COG3629	intracellular signal transduction
AJAP_12280	COG3903	Transcriptional regulator
AJAP_12300	COG3629	intracellular signal transduction
AJAP_12300	COG3903	Transcriptional regulator
AJAP_12360	COG2197	response regulator
AJAP_12380	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AJAP_12395	COG0156	8-amino-7-oxononanoate synthase activity
AJAP_12400	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_12485	COG1280	lysine exporter protein (LysE YggA)
AJAP_12490	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_12520	COG4977	sequence-specific DNA binding
AJAP_12535	COG3903	Transcriptional regulator
AJAP_12535	COG3629	intracellular signal transduction
AJAP_12545	COG4172	Belongs to the ABC transporter superfamily
AJAP_12550	COG4171	peptide transport system, permease
AJAP_12555	COG0601	transmembrane transport
AJAP_12560	COG4166	transmembrane transport
AJAP_12565	COG2890	protein-(glutamine-N5) methyltransferase activity
AJAP_12570	COG0025	NhaP-type Na H and K H
AJAP_12585	COG3835	regulator
AJAP_12590	COG3239	Fatty acid desaturase
AJAP_12620	COG0583	DNA-binding transcription factor activity
AJAP_12630	COG2197	response regulator
AJAP_12635	COG4585	Histidine kinase
AJAP_12650	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AJAP_12700	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_12705	COG1309	transcriptional regulator
AJAP_12710	COG1960	acyl-CoA dehydrogenase activity
AJAP_12725	COG1414	Transcriptional regulator
AJAP_12730	COG3734	2-keto-3-deoxy-galactonokinase
AJAP_12735	COG0800	Aldolase
AJAP_12740	COG4948	Mandelate Racemase Muconate Lactonizing
AJAP_12745	COG2271	Major facilitator Superfamily
AJAP_12755	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AJAP_12765	COG1595	DNA-templated transcription, initiation
AJAP_12785	COG4585	Histidine kinase
AJAP_12790	COG2197	response regulator
AJAP_12795	COG0667	Aldo Keto reductase
AJAP_12825	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_12850	COG2610	gluconate transmembrane transporter activity
AJAP_12865	COG1131	(ABC) transporter
AJAP_12870	COG0473	3-isopropylmalate dehydrogenase activity
AJAP_12905	COG0604	alcohol dehydrogenase
AJAP_12955	COG0583	DNA-binding transcription factor activity
AJAP_12965	COG1819	glycosyl
AJAP_12970	COG2197	response regulator
AJAP_12980	COG3903	Transcriptional regulator
AJAP_12980	COG3629	intracellular signal transduction
AJAP_12985	COG2197	response regulator
AJAP_12990	COG2197	response regulator
AJAP_13050	COG2197	response regulator
AJAP_13065	COG2318	DinB family
AJAP_13085	COG0789	Transcriptional regulator
AJAP_13135	COG2124	cytochrome p450
AJAP_13145	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AJAP_13150	COG3795	YCII-related domain
AJAP_13155	COG4941	Belongs to the sigma-70 factor family
AJAP_13160	COG1349	DNA-binding transcription factor activity
AJAP_13190	COG3629	intracellular signal transduction
AJAP_13190	COG3903	Transcriptional regulator
AJAP_13195	COG3903	Transcriptional regulator
AJAP_13195	COG3629	intracellular signal transduction
AJAP_13205	COG2197	response regulator
AJAP_13230	COG3237	CsbD-like
AJAP_13255	COG0740	serine-type endopeptidase activity
AJAP_13260	COG0740	serine-type endopeptidase activity
AJAP_13280	COG1902	pentaerythritol trinitrate reductase activity
AJAP_13290	COG1846	Transcriptional regulator
AJAP_13315	COG0559	Belongs to the binding-protein-dependent transport system permease family
AJAP_13320	COG0410	ABC transporter
AJAP_13325	COG0411	ABC transporter
AJAP_13370	COG3845	ABC transporter
AJAP_13410	COG0596	Alpha beta hydrolase
AJAP_13415	COG2197	response regulator
AJAP_13445	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AJAP_13475	COG0583	DNA-binding transcription factor activity
AJAP_13490	COG2066	Belongs to the glutaminase family
AJAP_13510	COG2188	Transcriptional regulator
AJAP_13530	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AJAP_13535	COG1105	Belongs to the carbohydrate kinase PfkB family
AJAP_13555	COG0395	ABC-type sugar transport system, permease component
AJAP_13570	COG1349	DNA-binding transcription factor activity
AJAP_13575	COG1501	Belongs to the glycosyl hydrolase 31 family
AJAP_13580	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AJAP_13595	COG0583	DNA-binding transcription factor activity
AJAP_13600	COG0187	DNA topoisomerase II activity
AJAP_13640	COG0583	DNA-binding transcription factor activity
AJAP_13675	COG1653	transport
AJAP_13690	COG1511	domain protein
AJAP_13710	COG2226	methyltransferase
AJAP_13715	COG0539	negative regulation of cytoplasmic translation
AJAP_13730	COG1309	transcriptional regulator
AJAP_13735	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AJAP_13735	COG0237	dephospho-CoA kinase activity
AJAP_13770	COG1024	Enoyl-CoA hydratase
AJAP_13785	COG1131	(ABC) transporter
AJAP_13795	COG4946	Tricorn protease homolog
AJAP_13795	COG1506	peptidase
AJAP_13795	COG0823	Involved in the tonB-independent uptake of proteins
AJAP_13810	COG1609	Transcriptional regulator
AJAP_13815	COG1070	Carbohydrate kinase
AJAP_13860	COG3250	beta-galactosidase activity
AJAP_13870	COG3012	SEC-C Motif Domain Protein
AJAP_13910	COG0789	Transcriptional regulator
AJAP_13965	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AJAP_14010	COG1733	regulation of RNA biosynthetic process
AJAP_14020	COG1301	dicarboxylic acid transport
AJAP_14025	COG3290	protein histidine kinase activity
AJAP_14030	COG4565	transcriptional regulatory protein
AJAP_14085	COG2706	6-phosphogluconolactonase activity
AJAP_14090	COG2610	gluconate transmembrane transporter activity
AJAP_14095	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
AJAP_14115	COG0251	oxidation-reduction process
AJAP_14120	COG2515	1-aminocyclopropane-1-carboxylate deaminase
AJAP_14125	COG1802	Transcriptional regulator
AJAP_14140	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AJAP_14145	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AJAP_14150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AJAP_14155	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AJAP_14160	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AJAP_14160	COG0072	phenylalanine-tRNA ligase activity
AJAP_14195	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AJAP_14200	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AJAP_14205	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AJAP_14210	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AJAP_14215	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AJAP_14220	COG1438	arginine binding
AJAP_14225	COG0137	argininosuccinate synthase activity
AJAP_14230	COG0165	Argininosuccinate lyase
AJAP_14245	COG2094	Belongs to the DNA glycosylase MPG family
AJAP_14250	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AJAP_14275	COG0647	UMP catabolic process
AJAP_14290	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AJAP_14315	COG1953	Uracil, thiamine, allantoin
AJAP_14320	COG1802	Transcriptional regulator
AJAP_14330	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AJAP_14335	COG0504	CTP synthase activity
AJAP_14370	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AJAP_14380	COG2936	dipeptidyl-peptidase activity
AJAP_14390	COG1309	transcriptional regulator
AJAP_14395	COG0475	glutathione-regulated potassium exporter activity
AJAP_14425	COG1160	GTP binding
AJAP_14480	COG1846	Transcriptional regulator
AJAP_14500	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AJAP_14505	COG1414	Transcriptional regulator
AJAP_14515	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AJAP_14520	COG4948	Mandelate Racemase Muconate Lactonizing
AJAP_14535	COG5492	domain, Protein
AJAP_14540	COG0596	Alpha beta hydrolase
AJAP_14575	COG2124	cytochrome p450
AJAP_14585	COG5001	Diguanylate cyclase
AJAP_14605	COG4981	capsule polysaccharide biosynthetic process
AJAP_14640	COG0500	methyltransferase
AJAP_14670	COG4991	sh3 domain protein
AJAP_14685	COG0596	Alpha beta hydrolase
AJAP_14690	COG3903	Transcriptional regulator
AJAP_14690	COG3629	intracellular signal transduction
AJAP_14715	COG1595	DNA-templated transcription, initiation
AJAP_14720	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AJAP_14735	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AJAP_14745	COG0028	Belongs to the TPP enzyme family
AJAP_14750	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AJAP_14765	COG2315	Protein conserved in bacteria
AJAP_14770	COG4585	Histidine kinase
AJAP_14775	COG2197	response regulator
AJAP_14780	COG3629	intracellular signal transduction
AJAP_14780	COG3903	Transcriptional regulator
AJAP_14800	COG1309	transcriptional regulator
AJAP_14805	COG2409	Drug exporters of the RND superfamily
AJAP_14820	COG4106	trans-aconitate 2-methyltransferase activity
AJAP_14845	COG1064	alcohol dehydrogenase
AJAP_14855	COG1309	transcriptional regulator
AJAP_14860	COG1132	(ABC) transporter
AJAP_14875	COG0454	-acetyltransferase
AJAP_14875	COG0456	acetyltransferase
AJAP_14880	COG1063	alcohol dehydrogenase
AJAP_14895	COG0861	Integral membrane protein TerC family
AJAP_14920	COG0477	Major facilitator Superfamily
AJAP_14935	COG1960	acyl-CoA dehydrogenase activity
AJAP_14945	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
AJAP_14950	COG2301	Belongs to the HpcH HpaI aldolase family
AJAP_14960	COG1309	transcriptional regulator
AJAP_14970	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_14975	COG2072	flavoprotein involved in K transport
AJAP_14990	COG2197	response regulator
AJAP_15015	COG1309	transcriptional regulator
AJAP_15060	COG1309	transcriptional regulator
AJAP_15070	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AJAP_15070	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AJAP_15085	COG0583	DNA-binding transcription factor activity
AJAP_15095	COG2076	Multidrug Resistance protein
AJAP_15100	COG2814	Major facilitator Superfamily
AJAP_15105	COG0583	DNA-binding transcription factor activity
AJAP_15130	COG0243	molybdopterin cofactor binding
AJAP_15155	COG2072	flavoprotein involved in K transport
AJAP_15165	COG2318	DinB family
AJAP_15170	COG2755	lipolytic protein G-D-S-L family
AJAP_15170	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AJAP_15175	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AJAP_15190	COG1335	isochorismatase
AJAP_15205	COG3511	phospholipase C
AJAP_15225	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AJAP_15230	COG1414	Transcriptional regulator
AJAP_15240	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AJAP_15245	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AJAP_15255	COG1959	2 iron, 2 sulfur cluster binding
AJAP_15260	COG0477	Major facilitator Superfamily
AJAP_15290	COG3226	Transcriptional regulator
AJAP_15295	COG0667	Aldo Keto reductase
AJAP_15300	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_15315	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AJAP_15345	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AJAP_15370	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AJAP_15440	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AJAP_15440	COG0515	serine threonine protein kinase
AJAP_15445	COG0515	serine threonine protein kinase
AJAP_15445	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AJAP_15470	COG0477	Major facilitator Superfamily
AJAP_15475	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AJAP_15475	COG3321	synthase
AJAP_15480	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_15495	COG0300	oxidoreductase activity
AJAP_15500	COG1819	glycosyl
AJAP_15535	COG0745	RESPONSE REGULATOR receiver
AJAP_15540	COG4251	negative regulation of phosphorylation
AJAP_15545	COG0784	Response regulator, receiver
AJAP_15565	COG2815	serine threonine protein kinase
AJAP_15565	COG0515	serine threonine protein kinase
AJAP_15575	COG0488	(ABC) transporter
AJAP_15590	COG0488	(ABC) transporter
AJAP_15615	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AJAP_15625	COG1522	sequence-specific DNA binding
AJAP_15695	COG1733	regulation of RNA biosynthetic process
AJAP_15715	COG3629	intracellular signal transduction
AJAP_15715	COG3903	Transcriptional regulator
AJAP_15720	COG3903	Transcriptional regulator
AJAP_15720	COG3629	intracellular signal transduction
AJAP_15730	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_15750	COG0778	Nitroreductase
AJAP_15760	COG2309	aminopeptidase activity
AJAP_15765	COG3473	Maleate cis-trans isomerase
AJAP_15775	COG0477	Major facilitator Superfamily
AJAP_15800	COG1335	isochorismatase
AJAP_15830	COG0148	phosphopyruvate hydratase activity
AJAP_15850	COG2197	response regulator
AJAP_15875	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_15880	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AJAP_15920	COG1414	Transcriptional regulator
AJAP_15930	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AJAP_15935	COG0280	phosphate acetyltransferase
AJAP_15940	COG2855	membrane
AJAP_15950	COG1113	amino acid transport
AJAP_15955	COG1595	DNA-templated transcription, initiation
AJAP_15970	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AJAP_16030	COG0798	PFAM Bile acid sodium symporter
AJAP_16085	COG2197	response regulator
AJAP_16115	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_16120	COG0531	amino acid
AJAP_16135	COG0596	Alpha beta hydrolase
AJAP_16150	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AJAP_16205	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AJAP_16210	COG0477	Major facilitator Superfamily
AJAP_16265	COG0477	Major facilitator Superfamily
AJAP_16275	COG0596	Alpha beta hydrolase
AJAP_16320	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AJAP_16345	COG1309	transcriptional regulator
AJAP_16405	COG4591	ABC-type transport system involved in lipoprotein release permease component
AJAP_16410	COG1136	(ABC) transporter
AJAP_16410	COG0577	efflux transmembrane transporter activity
AJAP_16415	COG0745	RESPONSE REGULATOR receiver
AJAP_16420	COG2205	protein histidine kinase activity
AJAP_16540	COG0778	Nitroreductase
AJAP_16545	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AJAP_16570	COG1560	Kdo2-lipid A biosynthetic process
AJAP_16575	COG0438	transferase activity, transferring glycosyl groups
AJAP_16585	COG3608	succinylglutamate desuccinylase aspartoacylase
AJAP_16585	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AJAP_16595	COG0277	FAD linked oxidase domain protein
AJAP_16600	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
AJAP_16620	COG3903	Transcriptional regulator
AJAP_16620	COG3629	intracellular signal transduction
AJAP_16655	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
AJAP_16660	COG0217	transcriptional regulatory protein
AJAP_16675	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AJAP_16680	COG0632	four-way junction helicase activity
AJAP_16700	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AJAP_16705	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AJAP_16710	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AJAP_16715	COG1024	Enoyl-CoA hydratase
AJAP_16720	COG0154	amidase activity
AJAP_16725	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AJAP_16730	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AJAP_16735	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AJAP_16765	COG3903	Transcriptional regulator
AJAP_16765	COG3629	intracellular signal transduction
AJAP_16810	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AJAP_16815	COG2018	Roadblock/LC7 domain
AJAP_16835	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AJAP_16855	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AJAP_16880	COG1280	lysine exporter protein (LysE YggA)
AJAP_16890	COG2267	carboxylic ester hydrolase activity
AJAP_16900	COG0596	Alpha beta hydrolase
AJAP_16905	COG2223	nitrite transmembrane transporter activity
AJAP_16910	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AJAP_16925	COG0045	succinate-CoA ligase (ADP-forming) activity
AJAP_16935	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AJAP_16940	COG1042	CoA-binding domain protein
AJAP_16940	COG0045	succinate-CoA ligase (ADP-forming) activity
AJAP_16940	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AJAP_16945	COG2223	nitrite transmembrane transporter activity
AJAP_16950	COG1802	Transcriptional regulator
AJAP_16955	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AJAP_16960	COG3383	formate dehydrogenase (NAD+) activity
AJAP_16965	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
AJAP_16970	COG1034	ATP synthesis coupled electron transport
AJAP_16975	COG3622	Belongs to the hyi family
AJAP_16980	COG2084	Dehydrogenase
AJAP_16985	COG3960	tartronate-semialdehyde synthase activity
AJAP_17005	COG2366	antibiotic biosynthetic process
AJAP_17015	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AJAP_17045	COG1793	dna ligase
AJAP_17045	COG3285	dna ligase
AJAP_17055	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AJAP_17065	COG1522	sequence-specific DNA binding
AJAP_17085	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
AJAP_17110	COG0745	RESPONSE REGULATOR receiver
AJAP_17125	COG2197	response regulator
AJAP_17155	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
AJAP_17155	COG0778	Nitroreductase
AJAP_17170	COG4977	sequence-specific DNA binding
AJAP_17180	COG2197	response regulator
AJAP_17185	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AJAP_17190	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_17205	COG2814	Major facilitator Superfamily
AJAP_17220	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AJAP_17225	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_17240	COG1309	transcriptional regulator
AJAP_17250	COG4106	trans-aconitate 2-methyltransferase activity
AJAP_17265	COG0488	(ABC) transporter
AJAP_17280	COG0395	ABC-type sugar transport system, permease component
AJAP_17285	COG1175	transmembrane transport
AJAP_17300	COG1609	Transcriptional regulator
AJAP_17305	COG1879	ABC-type sugar transport system periplasmic component
AJAP_17315	COG1172	Belongs to the binding-protein-dependent transport system permease family
AJAP_17320	COG1172	Belongs to the binding-protein-dependent transport system permease family
AJAP_17335	COG2160	L-arabinose isomerase activity
AJAP_17340	COG4213	ABC transporter substrate-binding protein
AJAP_17345	COG1129	ABC transporter
AJAP_17350	COG4214	carbohydrate transport
AJAP_17360	COG3940	Belongs to the glycosyl hydrolase 43 family
AJAP_17365	COG3250	beta-galactosidase activity
AJAP_17405	COG3971	2-oxopent-4-enoate hydratase activity
AJAP_17430	COG0477	Major facilitator Superfamily
AJAP_17455	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AJAP_17470	COG0537	adenosine 5'-monophosphoramidase activity
AJAP_17485	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
AJAP_17505	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AJAP_17575	COG0477	Major facilitator Superfamily
AJAP_17580	COG2409	Drug exporters of the RND superfamily
AJAP_17585	COG1846	Transcriptional regulator
AJAP_17590	COG0702	epimerase
AJAP_17595	COG1609	Transcriptional regulator
AJAP_17600	COG1175	transmembrane transport
AJAP_17605	COG0395	ABC-type sugar transport system, permease component
AJAP_17625	COG0745	RESPONSE REGULATOR receiver
AJAP_17630	COG5002	protein histidine kinase activity
AJAP_17635	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AJAP_17635	COG2755	lipolytic protein G-D-S-L family
AJAP_17640	COG2814	Major facilitator Superfamily
AJAP_17650	COG1846	Transcriptional regulator
AJAP_17660	COG1733	regulation of RNA biosynthetic process
AJAP_17695	COG1175	transmembrane transport
AJAP_17700	COG0395	ABC-type sugar transport system, permease component
AJAP_17710	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
AJAP_17725	COG4948	Mandelate Racemase Muconate Lactonizing
AJAP_17735	COG2271	Major facilitator Superfamily
AJAP_17765	COG0444	Belongs to the ABC transporter superfamily
AJAP_17770	COG4608	Belongs to the ABC transporter superfamily
AJAP_17795	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AJAP_17830	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_17840	COG4638	Rieske (2fe-2S)
AJAP_17870	COG0154	amidase activity
AJAP_17875	COG4566	intracellular signal transduction
AJAP_17885	COG0477	Major facilitator Superfamily
AJAP_17890	COG0154	amidase activity
AJAP_17895	COG1136	(ABC) transporter
AJAP_17895	COG0577	efflux transmembrane transporter activity
AJAP_17935	COG2197	response regulator
AJAP_17940	COG4585	Histidine kinase
AJAP_17945	COG1609	Transcriptional regulator
AJAP_17950	COG1879	ABC-type sugar transport system periplasmic component
AJAP_17955	COG1129	ABC transporter
AJAP_17960	COG1172	Belongs to the binding-protein-dependent transport system permease family
AJAP_17965	COG1172	Belongs to the binding-protein-dependent transport system permease family
AJAP_18000	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_18025	COG0477	Major facilitator Superfamily
AJAP_18035	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AJAP_18055	COG0508	dehydrogenase complex catalyzes the overall conversion of
AJAP_18075	COG1522	sequence-specific DNA binding
AJAP_18095	COG1940	carbohydrate kinase activity
AJAP_18100	COG2115	Belongs to the xylose isomerase family
AJAP_18145	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_18210	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AJAP_18215	COG3404	Formiminotransferase-cyclodeaminase
AJAP_18250	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_18265	COG3546	catalase activity
AJAP_18295	COG0427	acetyl-CoA hydrolase
AJAP_18320	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AJAP_18350	COG0667	Aldo Keto reductase
AJAP_18355	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_18360	COG1968	undecaprenyl-diphosphatase activity
AJAP_18370	COG0339	signal peptide processing
AJAP_18380	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_18420	COG0039	L-malate dehydrogenase activity
AJAP_18425	COG1846	Transcriptional regulator
AJAP_18475	COG0477	Major facilitator Superfamily
AJAP_18480	COG3537	Alpha-1,2-mannosidase
AJAP_18490	COG1136	(ABC) transporter
AJAP_18495	COG1136	(ABC) transporter
AJAP_18515	COG2084	Dehydrogenase
AJAP_18525	COG0697	spore germination
AJAP_18545	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AJAP_18555	COG1309	transcriptional regulator
AJAP_18570	COG2226	methyltransferase
AJAP_18575	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AJAP_18580	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AJAP_18580	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AJAP_18585	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AJAP_18595	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AJAP_18600	COG0387	Pfam Sodium calcium exchanger
AJAP_18655	COG2755	lipolytic protein G-D-S-L family
AJAP_18655	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AJAP_18665	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
AJAP_18670	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AJAP_18695	COG2197	response regulator
AJAP_18700	COG4585	Histidine kinase
AJAP_18715	COG0589	response to stress
AJAP_18720	COG0517	IMP dehydrogenase activity
AJAP_18720	COG0516	GMP reductase activity
AJAP_18795	COG0028	Belongs to the TPP enzyme family
AJAP_18805	COG2080	2 iron, 2 sulfur cluster binding
AJAP_18810	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AJAP_18815	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AJAP_18825	COG2272	Belongs to the type-B carboxylesterase lipase family
AJAP_18830	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AJAP_18845	COG1802	Transcriptional regulator
AJAP_18855	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AJAP_18860	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AJAP_18870	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AJAP_18875	COG2508	Transcriptional regulator
AJAP_18875	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
AJAP_18895	COG2226	methyltransferase
AJAP_18900	COG4974	Belongs to the 'phage' integrase family
AJAP_18935	COG2755	lipolytic protein G-D-S-L family
AJAP_18940	COG2826	transposase and inactivated derivatives, IS30 family
AJAP_18950	COG1357	PFAM Pentapeptide repeats (8 copies)
AJAP_18970	COG0702	epimerase
AJAP_18985	COG4941	Belongs to the sigma-70 factor family
AJAP_19025	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AJAP_19050	COG1960	acyl-CoA dehydrogenase activity
AJAP_19055	COG1309	transcriptional regulator
AJAP_19065	COG1595	DNA-templated transcription, initiation
AJAP_19070	COG2318	DinB family
AJAP_19080	COG2890	protein-(glutamine-N5) methyltransferase activity
AJAP_19085	COG2226	methyltransferase
AJAP_19090	COG2226	methyltransferase
AJAP_19100	COG1733	regulation of RNA biosynthetic process
AJAP_19115	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AJAP_19140	COG1435	thymidine kinase activity
AJAP_19150	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AJAP_19160	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_19180	COG0463	Glycosyl transferase, family 2
AJAP_19190	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AJAP_19195	COG1509	lysine 2,3-aminomutase activity
AJAP_19230	COG4249	Peptidase C14 caspase catalytic subunit p20
AJAP_19230	COG2319	Wd-40 repeat
AJAP_19245	COG2353	YceI-like domain
AJAP_19250	COG4106	trans-aconitate 2-methyltransferase activity
AJAP_19255	COG0583	DNA-binding transcription factor activity
AJAP_19265	COG3485	protocatechuate 3,4-dioxygenase
AJAP_19275	COG3903	Transcriptional regulator
AJAP_19275	COG3629	intracellular signal transduction
AJAP_19290	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AJAP_19295	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AJAP_19300	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AJAP_19305	COG2423	ornithine cyclodeaminase activity
AJAP_19340	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AJAP_19350	COG1522	sequence-specific DNA binding
AJAP_19360	COG0590	tRNA wobble adenosine to inosine editing
AJAP_19375	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_19380	COG0583	DNA-binding transcription factor activity
AJAP_19390	COG0596	Alpha beta hydrolase
AJAP_19400	COG2197	response regulator
AJAP_19405	COG4585	Histidine kinase
AJAP_19445	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AJAP_19450	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AJAP_19470	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AJAP_19475	COG2814	Major facilitator Superfamily
AJAP_19505	COG2124	cytochrome p450
AJAP_19520	COG4412	M6 family metalloprotease domain protein
AJAP_19520	COG3291	Pkd domain containing protein
AJAP_19525	COG2080	2 iron, 2 sulfur cluster binding
AJAP_19530	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
AJAP_19535	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AJAP_19545	COG3629	intracellular signal transduction
AJAP_19545	COG3903	Transcriptional regulator
AJAP_19555	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AJAP_19580	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AJAP_19590	COG3321	synthase
AJAP_19590	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AJAP_19590	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AJAP_19590	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AJAP_19605	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AJAP_19610	COG1181	Belongs to the D-alanine--D-alanine ligase family
AJAP_19615	COG1834	amidinotransferase
AJAP_19630	COG0475	glutathione-regulated potassium exporter activity
AJAP_19660	COG0640	Transcriptional regulator
AJAP_19670	COG0431	NADPH-dependent FMN reductase
AJAP_19675	COG0477	Major facilitator Superfamily
AJAP_19720	COG1619	proteins homologs of microcin C7 resistance protein MccF
AJAP_19750	COG0601	transmembrane transport
AJAP_19790	COG1733	regulation of RNA biosynthetic process
AJAP_19795	COG0183	Belongs to the thiolase family
AJAP_19805	COG1595	DNA-templated transcription, initiation
AJAP_19815	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AJAP_19835	COG0488	(ABC) transporter
AJAP_19845	COG2362	D-Aminopeptidase
AJAP_19850	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AJAP_19870	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AJAP_19875	COG4221	oxidoreductase activity
AJAP_19880	COG0583	DNA-binding transcription factor activity
AJAP_19935	COG4552	Acetyltransferase involved in intracellular survival and related
AJAP_19965	COG1597	lipid kinase activity
AJAP_19970	COG0805	protein transport
AJAP_19975	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AJAP_19985	COG2378	regulation of single-species biofilm formation
AJAP_19995	COG1733	regulation of RNA biosynthetic process
AJAP_20000	COG0604	alcohol dehydrogenase
AJAP_20020	COG0640	Transcriptional regulator
AJAP_20025	COG4447	cellulose binding
AJAP_20030	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AJAP_20050	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AJAP_20055	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
AJAP_20070	COG1051	belongs to the nudix hydrolase family
AJAP_20095	COG1222	aaa ATPase
AJAP_20115	COG0517	IMP dehydrogenase activity
AJAP_20115	COG1994	Peptidase M50
AJAP_20130	COG1192	Involved in chromosome partitioning
AJAP_20135	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AJAP_20140	COG0140	phosphoribosyl-ATP diphosphatase activity
AJAP_20155	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AJAP_20170	COG2814	Major facilitator Superfamily
AJAP_20180	COG0488	(ABC) transporter
AJAP_20185	COG0215	cysteine-tRNA ligase activity
AJAP_20190	COG0789	Transcriptional regulator
AJAP_20195	COG4867	von Willebrand factor, type A
AJAP_20225	COG0596	Alpha beta hydrolase
AJAP_20230	COG3226	Transcriptional regulator
AJAP_20255	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AJAP_20265	COG0477	Major facilitator Superfamily
AJAP_20270	COG0745	RESPONSE REGULATOR receiver
AJAP_20275	COG2205	protein histidine kinase activity
AJAP_20295	COG3540	Alkaline phosphatase
AJAP_20300	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AJAP_20305	COG2304	oxidoreductase activity
AJAP_20315	COG0714	Associated with various cellular activities
AJAP_20325	COG0746	molybdenum cofactor guanylyltransferase activity
AJAP_20330	COG0791	NLP P60 protein
AJAP_20330	COG3883	PFAM NLP P60 protein
AJAP_20335	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AJAP_20355	COG0477	Major facilitator Superfamily
AJAP_20380	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
AJAP_20385	COG0121	glutamine amidotransferase
AJAP_20390	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AJAP_20395	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AJAP_20405	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AJAP_20410	COG2267	carboxylic ester hydrolase activity
AJAP_20465	COG0656	L-ascorbic acid biosynthetic process
AJAP_20480	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AJAP_20480	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AJAP_20505	COG1716	ATPase activity
AJAP_20510	COG0509	glycine decarboxylation via glycine cleavage system
AJAP_20565	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AJAP_20570	COG1024	Enoyl-CoA hydratase
AJAP_20585	COG1648	precorrin-2 dehydrogenase activity
AJAP_20585	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AJAP_20600	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AJAP_20605	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AJAP_20610	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AJAP_20620	COG0254	rRNA binding
AJAP_20630	COG0523	cobalamin synthesis protein
AJAP_20645	COG0640	Transcriptional regulator
AJAP_20665	COG3568	Endonuclease Exonuclease Phosphatase
AJAP_20700	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_20730	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_20735	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AJAP_20750	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AJAP_20755	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AJAP_20760	COG1132	(ABC) transporter
AJAP_20765	COG1132	(ABC) transporter
AJAP_20770	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
AJAP_20795	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AJAP_20830	COG0488	(ABC) transporter
AJAP_20840	COG1024	Enoyl-CoA hydratase
AJAP_20850	COG1595	DNA-templated transcription, initiation
AJAP_20880	COG3903	Transcriptional regulator
AJAP_20880	COG3629	intracellular signal transduction
AJAP_20890	COG4257	antibiotic catabolic process
AJAP_20905	COG2197	response regulator
AJAP_20915	COG0596	Alpha beta hydrolase
AJAP_20940	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AJAP_20940	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AJAP_20955	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AJAP_20960	COG0791	NLP P60 protein
AJAP_20960	COG3103	Sh3 type 3 domain protein
AJAP_20960	COG1388	LysM domain
AJAP_21005	COG0477	Major facilitator Superfamily
AJAP_21015	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AJAP_21025	COG0531	amino acid
AJAP_21030	COG3938	Belongs to the proline racemase family
AJAP_21035	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AJAP_21065	COG0006	proline dipeptidase activity
AJAP_21070	COG0583	DNA-binding transcription factor activity
AJAP_21095	COG1366	Belongs to the anti-sigma-factor antagonist family
AJAP_21110	COG2197	response regulator
AJAP_21115	COG4585	Histidine kinase
AJAP_21135	COG0129	dihydroxy-acid dehydratase activity
AJAP_21140	COG1253	flavin adenine dinucleotide binding
AJAP_21155	COG4977	sequence-specific DNA binding
AJAP_21240	COG0747	negative chemotaxis
AJAP_21245	COG0601	transmembrane transport
AJAP_21265	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_21270	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AJAP_21295	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_21300	COG1802	Transcriptional regulator
AJAP_21310	COG5504	Zn-dependent protease
AJAP_21325	COG0701	Predicted permease
AJAP_21390	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AJAP_21405	COG1120	ATPase activity
AJAP_21410	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AJAP_21415	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AJAP_21420	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AJAP_21425	COG2375	cellular response to nickel ion
AJAP_21430	COG1535	isochorismatase
AJAP_21430	COG3433	isochorismatase activity
AJAP_21435	COG3433	isochorismatase activity
AJAP_21435	COG1535	isochorismatase
AJAP_21440	COG1021	2,3-dihydroxybenzoate-AMP ligase
AJAP_21445	COG1169	isochorismate synthase
AJAP_21450	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_21460	COG2205	protein histidine kinase activity
AJAP_21465	COG0745	RESPONSE REGULATOR receiver
AJAP_21480	COG4977	sequence-specific DNA binding
AJAP_21495	COG0825	malonyl-CoA metabolic process
AJAP_21495	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AJAP_21500	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_21510	COG2186	Transcriptional regulator
AJAP_21515	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_21525	COG0277	FAD linked oxidase domain protein
AJAP_21530	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AJAP_21535	COG1414	Transcriptional regulator
AJAP_21560	COG2124	cytochrome p450
AJAP_21575	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AJAP_21585	COG0477	Major facilitator Superfamily
AJAP_21615	COG1609	Transcriptional regulator
AJAP_21625	COG1175	transmembrane transport
AJAP_21635	COG0366	Alpha amylase catalytic
AJAP_21640	COG3629	intracellular signal transduction
AJAP_21640	COG3903	Transcriptional regulator
AJAP_21645	COG1764	response to oxidative stress
AJAP_21695	COG0667	Aldo Keto reductase
AJAP_21705	COG0596	Alpha beta hydrolase
AJAP_21720	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AJAP_21730	COG4209	transmembrane transport
AJAP_21735	COG0395	ABC-type sugar transport system, permease component
AJAP_21750	COG1609	Transcriptional regulator
AJAP_21775	COG1609	Transcriptional regulator
AJAP_21805	COG1403	HNH endonuclease
AJAP_21820	COG0583	DNA-binding transcription factor activity
AJAP_21825	COG0277	FAD linked oxidase domain protein
AJAP_21870	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AJAP_21895	COG3226	Transcriptional regulator
AJAP_21915	COG0714	Associated with various cellular activities
AJAP_21920	COG3552	Protein containing von Willebrand factor type A (VWA) domain
AJAP_21955	COG0596	Alpha beta hydrolase
AJAP_21995	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
AJAP_21995	COG0778	Nitroreductase
AJAP_22000	COG0673	inositol 2-dehydrogenase activity
AJAP_22010	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AJAP_22070	COG3903	Transcriptional regulator
AJAP_22070	COG3629	intracellular signal transduction
AJAP_22125	COG0583	DNA-binding transcription factor activity
AJAP_22135	COG2132	Multicopper oxidase
AJAP_22140	COG0179	Fumarylacetoacetate (FAA) hydrolase
AJAP_22145	COG0247	lactate metabolic process
AJAP_22145	COG0277	FAD linked oxidase domain protein
AJAP_22150	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AJAP_22185	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AJAP_22195	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_22300	COG2197	response regulator
AJAP_22345	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AJAP_22360	COG3525	Glycosyl hydrolase, family 20, catalytic domain
AJAP_22360	COG3291	Pkd domain containing protein
AJAP_22395	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_22400	COG3268	Saccharopine dehydrogenase
AJAP_22405	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_22410	COG1522	sequence-specific DNA binding
AJAP_22415	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AJAP_22420	COG0477	Major facilitator Superfamily
AJAP_22425	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_22430	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
AJAP_22445	COG1960	acyl-CoA dehydrogenase activity
AJAP_22465	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_22540	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AJAP_22545	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AJAP_22565	COG0367	asparagine synthase
AJAP_22590	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AJAP_22595	COG0154	amidase activity
AJAP_22600	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
AJAP_22610	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_22615	COG0477	Major facilitator Superfamily
AJAP_22625	COG0667	Aldo Keto reductase
AJAP_22630	COG2197	response regulator
AJAP_22635	COG4585	Histidine kinase
AJAP_22645	COG0736	holo-[acyl-carrier-protein] synthase activity
AJAP_22665	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AJAP_22675	COG0736	holo-[acyl-carrier-protein] synthase activity
AJAP_22690	COG0736	holo-[acyl-carrier-protein] synthase activity
AJAP_22695	COG3629	intracellular signal transduction
AJAP_22695	COG3903	Transcriptional regulator
AJAP_22770	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_22780	COG2814	Major facilitator Superfamily
AJAP_22800	COG0475	glutathione-regulated potassium exporter activity
AJAP_22805	COG3033	Beta-eliminating lyase
AJAP_22825	COG1309	transcriptional regulator
AJAP_22830	COG0477	Major facilitator Superfamily
AJAP_22835	COG1473	amidohydrolase
AJAP_22880	COG0300	oxidoreductase activity
AJAP_22880	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_22880	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AJAP_22880	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_22880	COG3321	synthase
AJAP_22925	COG4941	Belongs to the sigma-70 factor family
AJAP_22940	COG2197	response regulator
AJAP_22945	COG2197	response regulator
AJAP_22955	COG4946	Tricorn protease homolog
AJAP_22955	COG1506	peptidase
AJAP_22955	COG0823	Involved in the tonB-independent uptake of proteins
AJAP_23050	COG1222	aaa ATPase
AJAP_23110	COG3345	alpha-galactosidase
AJAP_23115	COG4977	sequence-specific DNA binding
AJAP_23130	COG2356	endonuclease I
AJAP_23160	COG0596	Alpha beta hydrolase
AJAP_23165	COG2197	response regulator
AJAP_23170	COG4585	Histidine kinase
AJAP_23205	COG1335	isochorismatase
AJAP_23210	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
AJAP_23290	COG3903	Transcriptional regulator
AJAP_23290	COG3629	intracellular signal transduction
AJAP_23320	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AJAP_23345	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AJAP_23350	COG0723	plastoquinol--plastocyanin reductase activity
AJAP_23355	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AJAP_23370	COG2890	protein-(glutamine-N5) methyltransferase activity
AJAP_23390	COG0438	transferase activity, transferring glycosyl groups
AJAP_23410	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AJAP_23415	COG2192	nodulation
AJAP_23420	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AJAP_23425	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AJAP_23425	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AJAP_23430	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_23440	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AJAP_23470	COG0704	Plays a role in the regulation of phosphate uptake
AJAP_23510	COG0859	PFAM glycosyl transferase family 9
AJAP_23515	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_23530	COG0475	glutathione-regulated potassium exporter activity
AJAP_23535	COG1834	amidinotransferase
AJAP_23540	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AJAP_23575	COG0069	glutamate synthase activity
AJAP_23580	COG0017	Asparaginyl-tRNA synthetase
AJAP_23610	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AJAP_23610	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AJAP_23655	COG3655	Transcriptional regulator
AJAP_23665	COG1573	uracil-dna glycosylase
AJAP_23740	COG0028	Belongs to the TPP enzyme family
AJAP_23745	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_23750	COG1309	transcriptional regulator
AJAP_23755	COG1733	regulation of RNA biosynthetic process
AJAP_23760	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AJAP_23770	COG2124	cytochrome p450
AJAP_23780	COG2815	serine threonine protein kinase
AJAP_23780	COG0515	serine threonine protein kinase
AJAP_23785	COG1414	Transcriptional regulator
AJAP_23790	COG0154	amidase activity
AJAP_23800	COG1053	succinate dehydrogenase
AJAP_23805	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_23815	COG1733	regulation of RNA biosynthetic process
AJAP_23830	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_23865	COG0697	spore germination
AJAP_23870	COG3629	intracellular signal transduction
AJAP_23870	COG3903	Transcriptional regulator
AJAP_23880	COG3706	GGDEF domain
AJAP_23890	COG0745	RESPONSE REGULATOR receiver
AJAP_23895	COG2205	protein histidine kinase activity
AJAP_23910	COG0328	RNA-DNA hybrid ribonuclease activity
AJAP_23915	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AJAP_23950	COG2814	Major facilitator Superfamily
AJAP_23955	COG3706	GGDEF domain
AJAP_23970	COG0439	Biotin carboxylase
AJAP_23980	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AJAP_23990	COG1819	glycosyl
AJAP_24000	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AJAP_24010	COG3321	synthase
AJAP_24010	COG0604	alcohol dehydrogenase
AJAP_24020	COG2855	membrane
AJAP_24025	COG2814	Major facilitator Superfamily
AJAP_24030	COG0697	spore germination
AJAP_24040	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AJAP_24040	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AJAP_24045	COG0739	heme binding
AJAP_24070	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
AJAP_24090	COG1793	dna ligase
AJAP_24100	COG0477	Major facilitator Superfamily
AJAP_24105	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_24135	COG1846	Transcriptional regulator
AJAP_24150	COG0564	pseudouridine synthase activity
AJAP_24165	COG2267	carboxylic ester hydrolase activity
AJAP_24175	COG2124	cytochrome p450
AJAP_24200	COG1940	carbohydrate kinase activity
AJAP_24205	COG0531	amino acid
AJAP_24225	COG0484	heat shock protein binding
AJAP_24255	COG0717	Belongs to the dCTP deaminase family
AJAP_24260	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AJAP_24265	COG1404	Belongs to the peptidase S8 family
AJAP_24285	COG1960	acyl-CoA dehydrogenase activity
AJAP_24290	COG1960	acyl-CoA dehydrogenase activity
AJAP_24295	COG1960	acyl-CoA dehydrogenase activity
AJAP_24305	COG1309	transcriptional regulator
AJAP_24385	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_24390	COG1024	Enoyl-CoA hydratase
AJAP_24410	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_24420	COG0477	Major facilitator Superfamily
AJAP_24435	COG0745	RESPONSE REGULATOR receiver
AJAP_24435	COG3706	GGDEF domain
AJAP_24440	COG3469	chitinase activity
AJAP_24465	COG1309	transcriptional regulator
AJAP_24485	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AJAP_24490	COG1960	acyl-CoA dehydrogenase activity
AJAP_24520	COG1024	Enoyl-CoA hydratase
AJAP_24530	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AJAP_24530	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AJAP_24540	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AJAP_24565	COG1316	TRANSCRIPTIONal
AJAP_24570	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AJAP_24575	COG2267	carboxylic ester hydrolase activity
AJAP_24580	COG4821	SIS domain
AJAP_24590	COG1132	(ABC) transporter
AJAP_24605	COG0488	(ABC) transporter
AJAP_24620	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AJAP_24630	COG2199	diguanylate cyclase activity
AJAP_24630	COG2200	EAL domain
AJAP_24660	COG0175	sulfate reduction
AJAP_24670	COG2197	response regulator
AJAP_24675	COG4585	Histidine kinase
AJAP_24690	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AJAP_24700	COG1742	UPF0060 membrane protein
AJAP_24705	COG2151	metal-sulfur cluster biosynthetic enzyme
AJAP_24720	COG0396	ATPase activity
AJAP_24755	COG1612	heme a metabolic process
AJAP_24805	COG0109	protoheme IX farnesyltransferase activity
AJAP_24815	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AJAP_24820	COG0166	Belongs to the GPI family
AJAP_24835	COG0363	glucosamine-6-phosphate deaminase activity
AJAP_24855	COG0149	triose-phosphate isomerase activity
AJAP_24860	COG0126	phosphoglycerate kinase activity
AJAP_24865	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AJAP_24935	COG3250	beta-galactosidase activity
AJAP_24940	COG1309	transcriptional regulator
AJAP_24950	COG0463	Glycosyl transferase, family 2
AJAP_24965	COG0297	glycogen (starch) synthase activity
AJAP_24980	COG1481	regulation of sporulation
AJAP_24990	COG1660	Displays ATPase and GTPase activities
AJAP_24995	COG0322	excinuclease ABC activity
AJAP_25015	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AJAP_25020	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AJAP_25020	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AJAP_25035	COG4585	Histidine kinase
AJAP_25040	COG2197	response regulator
AJAP_25060	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AJAP_25065	COG0405	Gamma-glutamyltransferase
AJAP_25075	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AJAP_25080	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AJAP_25090	COG1758	RNA polymerase activity
AJAP_25095	COG0194	GDP metabolic process
AJAP_25105	COG0284	orotidine-5'-phosphate decarboxylase activity
AJAP_25115	COG0505	Belongs to the CarA family
AJAP_25130	COG0540	Belongs to the ATCase OTCase family
AJAP_25135	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AJAP_25145	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AJAP_25150	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AJAP_25155	COG0006	proline dipeptidase activity
AJAP_25170	COG0346	lactoylglutathione lyase activity
AJAP_25175	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AJAP_25180	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AJAP_25190	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AJAP_25195	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AJAP_25230	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AJAP_25230	COG1263	PTS System
AJAP_25240	COG1263	PTS System
AJAP_25240	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AJAP_25240	COG2190	(PTS) system
AJAP_25245	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AJAP_25255	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AJAP_25285	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AJAP_25290	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AJAP_25305	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AJAP_25320	COG1215	transferase activity, transferring glycosyl groups
AJAP_25350	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
AJAP_25355	COG0235	Class ii aldolase
AJAP_25360	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
AJAP_25365	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
AJAP_25375	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
AJAP_25430	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AJAP_25460	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AJAP_25465	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AJAP_25475	COG0446	pyridine nucleotide-disulphide oxidoreductase
AJAP_25490	COG2326	polyphosphate kinase activity
AJAP_25495	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AJAP_25505	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AJAP_25515	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AJAP_25560	COG1793	dna ligase
AJAP_25575	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AJAP_25580	COG0506	proline dehydrogenase activity
AJAP_25585	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_25590	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
AJAP_25590	COG2508	Transcriptional regulator
AJAP_25595	COG0539	negative regulation of cytoplasmic translation
AJAP_25600	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_25620	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AJAP_25640	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AJAP_25655	COG3220	belongs to the UPF0276 family
AJAP_25665	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AJAP_25680	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AJAP_25690	COG2197	response regulator
AJAP_25700	COG1309	transcriptional regulator
AJAP_25715	COG3665	Urea carboxylase-associated protein
AJAP_25740	COG0183	Belongs to the thiolase family
AJAP_25745	COG1250	3-hydroxyacyl-CoA dehydrogenase
AJAP_25745	COG1024	Enoyl-CoA hydratase
AJAP_25755	COG0656	L-ascorbic acid biosynthetic process
AJAP_25760	COG2205	protein histidine kinase activity
AJAP_25765	COG0745	RESPONSE REGULATOR receiver
AJAP_25775	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AJAP_25790	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_25800	COG0300	oxidoreductase activity
AJAP_25805	COG1309	transcriptional regulator
AJAP_25810	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AJAP_25845	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AJAP_25850	COG0531	amino acid
AJAP_25855	COG0569	domain protein
AJAP_25885	COG0756	dUTP diphosphatase activity
AJAP_25905	COG0483	inositol monophosphate 1-phosphatase activity
AJAP_25965	COG0531	amino acid
AJAP_25985	COG0596	Alpha beta hydrolase
AJAP_26000	COG4214	carbohydrate transport
AJAP_26010	COG4213	ABC transporter substrate-binding protein
AJAP_26025	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AJAP_26050	COG2313	pseudouridylate synthase activity
AJAP_26070	COG2890	protein-(glutamine-N5) methyltransferase activity
AJAP_26075	COG1490	D-aminoacyl-tRNA deacylase activity
AJAP_26085	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AJAP_26085	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AJAP_26120	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AJAP_26125	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AJAP_26130	COG2188	Transcriptional regulator
AJAP_26140	COG2070	2-Nitropropane dioxygenase
AJAP_26175	COG1295	ribonuclease BN
AJAP_26185	COG2124	cytochrome p450
AJAP_26190	COG0183	Belongs to the thiolase family
AJAP_26210	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_26220	COG1024	Enoyl-CoA hydratase
AJAP_26240	COG0596	Alpha beta hydrolase
AJAP_26255	COG0110	maltose O-acetyltransferase activity
AJAP_26295	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AJAP_26305	COG2814	Major facilitator Superfamily
AJAP_26310	COG0183	Belongs to the thiolase family
AJAP_26315	COG1309	transcriptional regulator
AJAP_26320	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_26325	COG1960	acyl-CoA dehydrogenase activity
AJAP_26330	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_26335	COG1024	Enoyl-CoA hydratase
AJAP_26340	COG1960	acyl-CoA dehydrogenase activity
AJAP_26345	COG1960	acyl-CoA dehydrogenase activity
AJAP_26350	COG1960	acyl-CoA dehydrogenase activity
AJAP_26390	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AJAP_26395	COG0346	lactoylglutathione lyase activity
AJAP_26400	COG2267	carboxylic ester hydrolase activity
AJAP_26405	COG1960	acyl-CoA dehydrogenase activity
AJAP_26415	COG1053	succinate dehydrogenase
AJAP_26445	COG0196	riboflavin kinase activity
AJAP_26455	COG0183	Belongs to the thiolase family
AJAP_26470	COG1960	acyl-CoA dehydrogenase activity
AJAP_26475	COG1960	acyl-CoA dehydrogenase activity
AJAP_26495	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AJAP_26500	COG1960	acyl-CoA dehydrogenase activity
AJAP_26505	COG1309	transcriptional regulator
AJAP_26510	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_26520	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AJAP_26520	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AJAP_26520	COG1703	isobutyryl-CoA mutase activity
AJAP_26550	COG2018	Roadblock/LC7 domain
AJAP_26565	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AJAP_26580	COG2814	Major facilitator Superfamily
AJAP_26585	COG1566	PFAM secretion protein HlyD family protein
AJAP_26605	COG1024	Enoyl-CoA hydratase
AJAP_26615	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AJAP_26620	COG1960	acyl-CoA dehydrogenase activity
AJAP_26640	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_26645	COG1672	PFAM Archaeal ATPase
AJAP_26645	COG2114	Pfam Adenylate and Guanylate cyclase catalytic domain
AJAP_26665	COG1946	Acyl-CoA thioesterase
AJAP_26685	COG0640	Transcriptional regulator
AJAP_26705	COG1228	amidohydrolase
AJAP_26715	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AJAP_26740	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AJAP_26750	COG1940	carbohydrate kinase activity
AJAP_26760	COG0003	Pfam Anion-transporting ATPase
AJAP_26795	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_26850	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AJAP_26855	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AJAP_26865	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_26875	COG1960	acyl-CoA dehydrogenase activity
AJAP_26880	COG1960	acyl-CoA dehydrogenase activity
AJAP_26885	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_26905	COG1309	transcriptional regulator
AJAP_26920	COG0123	including yeast histone deacetylase and acetoin utilization protein
AJAP_26935	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AJAP_26955	COG2936	dipeptidyl-peptidase activity
AJAP_26980	COG1505	serine-type exopeptidase activity
AJAP_26985	COG2076	Multidrug Resistance protein
AJAP_26990	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AJAP_27030	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AJAP_27040	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AJAP_27050	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AJAP_27060	COG2211	Major facilitator Superfamily
AJAP_27070	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AJAP_27080	COG1196	nuclear chromosome segregation
AJAP_27095	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AJAP_27105	COG2205	protein histidine kinase activity
AJAP_27110	COG0745	RESPONSE REGULATOR receiver
AJAP_27115	COG1126	abc transporter atp-binding protein
AJAP_27120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AJAP_27125	COG0765	amino acid transport
AJAP_27130	COG0765	amino acid transport
AJAP_27140	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AJAP_27155	COG1053	succinate dehydrogenase
AJAP_27175	COG0800	Aldolase
AJAP_27195	COG2137	regulation of response to DNA damage stimulus
AJAP_27200	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AJAP_27210	COG0443	Heat shock 70 kDa protein
AJAP_27215	COG1201	RNA secondary structure unwinding
AJAP_27220	COG0242	peptide deformylase activity
AJAP_27345	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AJAP_27350	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AJAP_27355	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AJAP_27365	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AJAP_27370	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AJAP_27385	COG0768	penicillin binding
AJAP_27395	COG0275	rRNA processing
AJAP_27400	COG2001	Belongs to the MraZ family
AJAP_27445	COG0714	Associated with various cellular activities
AJAP_27455	COG1305	Transglutaminase-like
AJAP_27465	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AJAP_27475	COG1192	Involved in chromosome partitioning
AJAP_27480	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AJAP_27485	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AJAP_27495	COG0167	dihydroorotate dehydrogenase activity
AJAP_27500	COG0154	amidase activity
AJAP_27515	COG1595	DNA-templated transcription, initiation
AJAP_27525	COG1396	sequence-specific DNA binding
AJAP_27530	COG1058	Belongs to the CinA family
AJAP_27530	COG1546	Belongs to the CinA family
AJAP_27540	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AJAP_27545	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AJAP_27555	COG0596	Alpha beta hydrolase
AJAP_27580	COG1674	ftsk spoiiie
AJAP_27590	COG0655	NAD(P)H dehydrogenase (quinone) activity
AJAP_27620	COG1113	amino acid transport
AJAP_27635	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AJAP_27640	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AJAP_27675	COG3214	Protein conserved in bacteria
AJAP_27705	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AJAP_27710	COG0612	Peptidase, M16
AJAP_27715	COG1185	polyribonucleotide nucleotidyltransferase activity
AJAP_27720	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AJAP_27740	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AJAP_27760	COG3629	intracellular signal transduction
AJAP_27760	COG3903	Transcriptional regulator
AJAP_27795	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AJAP_27815	COG0779	Required for maturation of 30S ribosomal subunits
AJAP_28235	COG2197	response regulator
AJAP_28240	COG1733	regulation of RNA biosynthetic process
AJAP_28260	COG2936	dipeptidyl-peptidase activity
AJAP_28275	COG0745	RESPONSE REGULATOR receiver
AJAP_28280	COG2972	Histidine kinase
AJAP_28280	COG2205	protein histidine kinase activity
AJAP_28285	COG0583	DNA-binding transcription factor activity
AJAP_28290	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AJAP_28295	COG1024	Enoyl-CoA hydratase
AJAP_28305	COG1250	3-hydroxyacyl-CoA dehydrogenase
AJAP_28310	COG1960	acyl-CoA dehydrogenase activity
AJAP_28325	COG2197	response regulator
AJAP_28330	COG4585	Histidine kinase
AJAP_28340	COG1316	TRANSCRIPTIONal
AJAP_28395	COG4974	Belongs to the 'phage' integrase family
AJAP_28430	COG2172	sigma factor antagonist activity
AJAP_28445	COG1366	Belongs to the anti-sigma-factor antagonist family
AJAP_28455	COG4191	Histidine kinase
AJAP_28465	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_28485	COG0477	Major facilitator Superfamily
AJAP_28600	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_28610	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_28615	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AJAP_28620	COG0174	glutamine synthetase
AJAP_28630	COG1607	acyl-coa hydrolase
AJAP_28635	COG2072	flavoprotein involved in K transport
AJAP_28680	COG3850	Histidine kinase
AJAP_28680	COG5002	protein histidine kinase activity
AJAP_28695	COG0702	epimerase
AJAP_28770	COG3629	intracellular signal transduction
AJAP_28770	COG3903	Transcriptional regulator
AJAP_28780	COG2207	Transcriptional regulator
AJAP_28785	COG2223	nitrite transmembrane transporter activity
AJAP_28810	COG2072	flavoprotein involved in K transport
AJAP_28815	COG2508	Transcriptional regulator
AJAP_28835	COG3647	Membrane
AJAP_28840	COG0531	amino acid
AJAP_28860	COG3903	Transcriptional regulator
AJAP_28860	COG3629	intracellular signal transduction
AJAP_28905	COG3209	COG3209 Rhs family protein
AJAP_28930	COG1733	regulation of RNA biosynthetic process
AJAP_28950	COG4106	trans-aconitate 2-methyltransferase activity
AJAP_28965	COG1595	DNA-templated transcription, initiation
AJAP_28970	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AJAP_28990	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AJAP_29000	COG2197	response regulator
AJAP_29005	COG4585	Histidine kinase
AJAP_29015	COG1131	(ABC) transporter
AJAP_29020	COG0423	glycine-tRNA ligase activity
AJAP_29055	COG0701	Predicted permease
AJAP_29070	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AJAP_29075	COG1381	Involved in DNA repair and RecF pathway recombination
AJAP_29110	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AJAP_29125	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AJAP_29135	COG0537	adenosine 5'-monophosphoramidase activity
AJAP_29145	COG0484	heat shock protein binding
AJAP_29150	COG1420	regulation of RNA biosynthetic process
AJAP_29185	COG2205	protein histidine kinase activity
AJAP_29190	COG0745	RESPONSE REGULATOR receiver
AJAP_29195	COG1953	Uracil, thiamine, allantoin
AJAP_29205	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AJAP_29215	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AJAP_29270	COG0463	Glycosyl transferase, family 2
AJAP_29280	COG2192	nodulation
AJAP_29360	COG2732	(Barnase) inhibitor
AJAP_29375	COG0604	alcohol dehydrogenase
AJAP_29385	COG0531	amino acid
AJAP_29390	COG2070	2-Nitropropane dioxygenase
AJAP_29405	COG0481	GTPase activity
AJAP_29410	COG2226	methyltransferase
AJAP_29425	COG0268	Binds directly to 16S ribosomal RNA
AJAP_29440	COG0658	competence protein
AJAP_29440	COG2333	competence protein COMEC
AJAP_29445	COG1555	photosystem II stabilization
AJAP_29450	COG1307	EDD domain protein, DegV family
AJAP_29460	COG0406	alpha-ribazole phosphatase activity
AJAP_29465	COG0799	negative regulation of ribosome biogenesis
AJAP_29470	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AJAP_29480	COG0477	Major facilitator Superfamily
AJAP_29485	COG0018	arginyl-trna synthetase
AJAP_29505	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AJAP_29510	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AJAP_29515	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AJAP_29520	COG1530	ribonuclease E activity
AJAP_29530	COG0842	Transport permease protein
AJAP_29540	COG1131	(ABC) transporter
AJAP_29560	COG0105	UTP biosynthetic process
AJAP_29565	COG1733	regulation of RNA biosynthetic process
AJAP_29580	COG1403	HNH endonuclease
AJAP_29595	COG0285	dihydrofolate synthase activity
AJAP_29610	COG0525	valine-tRNA ligase activity
AJAP_29635	COG1316	TRANSCRIPTIONal
AJAP_29640	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_29655	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AJAP_29690	COG0740	serine-type endopeptidase activity
AJAP_29700	COG0544	peptidyl-prolyl cis-trans isomerase activity
AJAP_29705	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AJAP_29710	COG2205	protein histidine kinase activity
AJAP_29715	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AJAP_29725	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AJAP_29755	COG1846	Transcriptional regulator
AJAP_29760	COG2814	Major facilitator Superfamily
AJAP_29785	COG0515	serine threonine protein kinase
AJAP_29785	COG2815	serine threonine protein kinase
AJAP_29800	COG0693	protein deglycase activity
AJAP_29815	COG5002	protein histidine kinase activity
AJAP_29815	COG0784	Response regulator, receiver
AJAP_29855	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AJAP_29870	COG4941	Belongs to the sigma-70 factor family
AJAP_29895	COG0698	ribose 5-phosphate isomerase
AJAP_29910	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
AJAP_29920	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
AJAP_29940	COG0668	transmembrane transport
AJAP_29980	COG2902	Dehydrogenase
AJAP_30020	COG1609	Transcriptional regulator
AJAP_30055	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AJAP_30070	COG1733	regulation of RNA biosynthetic process
AJAP_30080	COG1113	amino acid transport
AJAP_30090	COG1846	Transcriptional regulator
AJAP_30100	COG1793	dna ligase
AJAP_30100	COG3285	dna ligase
AJAP_30105	COG1793	dna ligase
AJAP_30105	COG3285	dna ligase
AJAP_30140	COG2267	carboxylic ester hydrolase activity
AJAP_30145	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AJAP_30150	COG2197	response regulator
AJAP_30155	COG4977	sequence-specific DNA binding
AJAP_30155	COG1917	Cupin 2, conserved barrel domain protein
AJAP_30165	COG2197	response regulator
AJAP_30175	COG1733	regulation of RNA biosynthetic process
AJAP_30180	COG0009	L-threonylcarbamoyladenylate synthase
AJAP_30190	COG2197	response regulator
AJAP_30210	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AJAP_30240	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AJAP_30280	COG2124	cytochrome p450
AJAP_30300	COG1917	Cupin 2, conserved barrel domain protein
AJAP_30300	COG4977	sequence-specific DNA binding
AJAP_30315	COG3629	intracellular signal transduction
AJAP_30320	COG1733	regulation of RNA biosynthetic process
AJAP_30345	COG3795	YCII-related domain
AJAP_30350	COG1937	Protein conserved in bacteria
AJAP_30365	COG2608	mercury ion transmembrane transporter activity
AJAP_30390	COG2267	carboxylic ester hydrolase activity
AJAP_30395	COG4221	oxidoreductase activity
AJAP_30405	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
AJAP_30465	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_30500	COG0581	inorganic phosphate transmembrane transporter activity
AJAP_30510	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AJAP_30515	COG1063	alcohol dehydrogenase
AJAP_30530	COG0596	Alpha beta hydrolase
AJAP_30595	COG1609	Transcriptional regulator
AJAP_30610	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AJAP_30615	COG0745	RESPONSE REGULATOR receiver
AJAP_30625	COG2884	Cell division ATP-binding protein ftsE
AJAP_30630	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AJAP_30635	COG2972	Histidine kinase
AJAP_30635	COG2205	protein histidine kinase activity
AJAP_30665	COG1733	regulation of RNA biosynthetic process
AJAP_30710	COG1024	Enoyl-CoA hydratase
AJAP_30760	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_30770	COG1643	Atp-dependent helicase
AJAP_30780	COG0475	glutathione-regulated potassium exporter activity
AJAP_30810	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AJAP_30820	COG1802	Transcriptional regulator
AJAP_30840	COG3706	GGDEF domain
AJAP_30845	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
AJAP_30850	COG0010	Belongs to the arginase family
AJAP_30855	COG0412	Dienelactone hydrolase
AJAP_30870	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
AJAP_30880	COG0235	Class ii aldolase
AJAP_30880	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
AJAP_30885	COG4552	Acetyltransferase involved in intracellular survival and related
AJAP_30900	COG1309	transcriptional regulator
AJAP_30925	COG0277	FAD linked oxidase domain protein
AJAP_30925	COG0247	lactate metabolic process
AJAP_30935	COG2197	response regulator
AJAP_30940	COG0410	ABC transporter
AJAP_30950	COG0559	Belongs to the binding-protein-dependent transport system permease family
AJAP_30955	COG0559	Belongs to the binding-protein-dependent transport system permease family
AJAP_30970	COG1522	sequence-specific DNA binding
AJAP_30985	COG1739	Uncharacterized protein family UPF0029
AJAP_30990	COG0070	glutamate synthase
AJAP_30990	COG0067	glutamate synthase
AJAP_30990	COG0069	glutamate synthase activity
AJAP_31025	COG1492	cobalamin metabolic process
AJAP_31030	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
AJAP_31040	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
AJAP_31045	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
AJAP_31055	COG0789	Transcriptional regulator
AJAP_31060	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AJAP_31070	COG1797	cobyrinic acid a,c-diamide synthase activity
AJAP_31110	COG3973	AAA domain
AJAP_31115	COG2319	Wd-40 repeat
AJAP_31115	COG4249	Peptidase C14 caspase catalytic subunit p20
AJAP_31140	COG1131	(ABC) transporter
AJAP_31150	COG1476	TRANSCRIPTIONal
AJAP_31160	COG0542	response to heat
AJAP_31180	COG1929	Belongs to the glycerate kinase type-1 family
AJAP_31190	COG5002	protein histidine kinase activity
AJAP_31205	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AJAP_31205	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AJAP_31215	COG0488	(ABC) transporter
AJAP_31220	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AJAP_31225	COG2151	metal-sulfur cluster biosynthetic enzyme
AJAP_31230	COG3396	Phenylacetate-CoA oxygenase
AJAP_31235	COG3460	Phenylacetate-CoA oxygenase
AJAP_31240	COG3396	Phenylacetate-CoA oxygenase
AJAP_31245	COG2030	dehydratase
AJAP_31245	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_31285	COG2072	flavoprotein involved in K transport
AJAP_31300	COG2183	response to ionizing radiation
AJAP_31315	COG0513	Belongs to the DEAD box helicase family
AJAP_31325	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AJAP_31340	COG4585	Histidine kinase
AJAP_31345	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AJAP_31350	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AJAP_31360	COG3540	Alkaline phosphatase
AJAP_31365	COG4991	sh3 domain protein
AJAP_31370	COG3903	Transcriptional regulator
AJAP_31370	COG3629	intracellular signal transduction
AJAP_31375	COG4991	sh3 domain protein
AJAP_31425	COG1129	ABC transporter
AJAP_31430	COG1172	Belongs to the binding-protein-dependent transport system permease family
AJAP_31435	COG2186	Transcriptional regulator
AJAP_31460	COG1131	(ABC) transporter
AJAP_31465	COG0596	Alpha beta hydrolase
AJAP_31485	COG0765	amino acid transport
AJAP_31490	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AJAP_31605	COG2226	methyltransferase
AJAP_31630	COG2304	oxidoreductase activity
AJAP_31750	COG2197	response regulator
AJAP_31845	COG1660	Displays ATPase and GTPase activities
AJAP_31850	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AJAP_31970	COG0667	Aldo Keto reductase
AJAP_31980	COG1733	regulation of RNA biosynthetic process
AJAP_31985	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AJAP_31990	COG1024	Enoyl-CoA hydratase
AJAP_31995	COG1024	Enoyl-CoA hydratase
AJAP_32000	COG1024	Enoyl-CoA hydratase
AJAP_32070	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AJAP_32095	COG1819	glycosyl
AJAP_32105	COG2124	cytochrome p450
AJAP_32110	COG2124	cytochrome p450
AJAP_32115	COG2124	cytochrome p450
AJAP_32120	COG2124	cytochrome p450
AJAP_32150	COG1132	(ABC) transporter
AJAP_32165	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
AJAP_32170	COG1181	Belongs to the D-alanine--D-alanine ligase family
AJAP_32200	COG0628	permease
AJAP_32230	COG2909	trisaccharide binding
AJAP_32240	COG0477	Major facilitator Superfamily
AJAP_32245	COG3387	PFAM Glycoside hydrolase 15-related
AJAP_32300	COG0300	oxidoreductase activity
AJAP_32355	COG0697	spore germination
AJAP_32370	COG3511	phospholipase C
AJAP_32380	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AJAP_32460	COG2207	Transcriptional regulator
AJAP_32465	COG5650	phosphatidylinositol metabolic process
AJAP_32470	COG1725	Transcriptional regulator
AJAP_32475	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AJAP_32515	COG4977	sequence-specific DNA binding
AJAP_32530	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AJAP_32575	COG3291	Pkd domain containing protein
AJAP_32590	COG0084	hydrolase, TatD family'
AJAP_32600	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
AJAP_32610	COG0673	inositol 2-dehydrogenase activity
AJAP_32620	COG1172	Belongs to the binding-protein-dependent transport system permease family
AJAP_32625	COG1129	ABC transporter
AJAP_32635	COG1940	carbohydrate kinase activity
AJAP_32640	COG0477	Major facilitator Superfamily
AJAP_32650	COG4565	transcriptional regulatory protein
AJAP_32655	COG3290	protein histidine kinase activity
AJAP_32750	COG2255	four-way junction helicase activity
AJAP_32770	COG2181	nitrate reductase activity
AJAP_32770	COG0247	lactate metabolic process
AJAP_32780	COG1121	(ABC) transporter
AJAP_32785	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AJAP_32790	COG1120	ATPase activity
AJAP_32805	COG0326	Molecular chaperone. Has ATPase activity
AJAP_32820	COG3835	regulator
AJAP_32835	COG0596	Alpha beta hydrolase
AJAP_32840	COG0667	Aldo Keto reductase
AJAP_32845	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_32900	COG1175	transmembrane transport
AJAP_32905	COG0395	ABC-type sugar transport system, permease component
AJAP_32910	COG1472	Belongs to the glycosyl hydrolase 3 family
AJAP_32920	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_32925	COG2084	Dehydrogenase
AJAP_32940	COG0438	transferase activity, transferring glycosyl groups
AJAP_32945	COG0483	inositol monophosphate 1-phosphatase activity
AJAP_32955	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AJAP_32965	COG0297	glycogen (starch) synthase activity
AJAP_33000	COG5001	Diguanylate cyclase
AJAP_33030	COG3285	dna ligase
AJAP_33030	COG1793	dna ligase
AJAP_33075	COG0667	Aldo Keto reductase
AJAP_33090	COG3795	YCII-related domain
AJAP_33100	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_33115	COG0187	DNA topoisomerase II activity
AJAP_33120	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AJAP_33125	COG1960	acyl-CoA dehydrogenase activity
AJAP_33130	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_33135	COG2030	dehydratase
AJAP_33145	COG0183	Belongs to the thiolase family
AJAP_33155	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
AJAP_33155	COG0473	3-isopropylmalate dehydrogenase activity
AJAP_33165	COG0583	DNA-binding transcription factor activity
AJAP_33180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AJAP_33185	COG1643	Atp-dependent helicase
AJAP_33220	COG2197	response regulator
AJAP_33225	COG4585	Histidine kinase
AJAP_33240	COG1228	amidohydrolase
AJAP_33245	COG0402	S-adenosylhomocysteine deaminase activity
AJAP_33255	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AJAP_33260	COG2986	histidine ammonia-lyase
AJAP_33275	COG0596	Alpha beta hydrolase
AJAP_33295	COG4585	Histidine kinase
AJAP_33300	COG2197	response regulator
AJAP_33320	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AJAP_33325	COG2177	Part of the ABC transporter FtsEX involved in
AJAP_33330	COG2884	Cell division ATP-binding protein ftsE
AJAP_33335	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AJAP_33365	COG1615	UPF0182 protein
AJAP_33375	COG3480	Lon protease (S16) C-terminal proteolytic domain
AJAP_33450	COG0174	glutamine synthetase
AJAP_33460	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AJAP_33470	COG0519	Catalyzes the synthesis of GMP from XMP
AJAP_33470	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AJAP_33480	COG1522	sequence-specific DNA binding
AJAP_33500	COG0154	amidase activity
AJAP_33505	COG0174	glutamine synthetase
AJAP_33530	COG0653	protein targeting
AJAP_33535	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AJAP_33535	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AJAP_33550	COG2318	DinB family
AJAP_33555	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AJAP_33555	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AJAP_33560	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AJAP_33570	COG0596	Alpha beta hydrolase
AJAP_33580	COG5479	isomerase activity
AJAP_33580	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
AJAP_33585	COG1177	transmembrane transport
AJAP_33590	COG1176	ABC-type spermidine putrescine transport system, permease component I
AJAP_33595	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AJAP_33600	COG3842	ATPase activity
AJAP_33605	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_33630	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_33635	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AJAP_33760	COG0328	RNA-DNA hybrid ribonuclease activity
AJAP_33760	COG0406	alpha-ribazole phosphatase activity
AJAP_33770	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AJAP_33800	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
AJAP_33810	COG3265	gluconokinase activity
AJAP_33820	COG0640	Transcriptional regulator
AJAP_33835	COG1486	melibiose metabolic process
AJAP_33840	COG0395	ABC-type sugar transport system, permease component
AJAP_33845	COG1175	transmembrane transport
AJAP_33865	COG0612	Peptidase, M16
AJAP_33915	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
AJAP_33920	COG0714	Associated with various cellular activities
AJAP_33965	COG0210	DNA helicase
AJAP_33980	COG4585	Histidine kinase
AJAP_33990	COG2378	regulation of single-species biofilm formation
AJAP_34010	COG0745	RESPONSE REGULATOR receiver
AJAP_34015	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AJAP_34015	COG2146	nitrite reductase [NAD(P)H] activity
AJAP_34020	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AJAP_34020	COG2146	nitrite reductase [NAD(P)H] activity
AJAP_34025	COG2223	nitrite transmembrane transporter activity
AJAP_34030	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AJAP_34035	COG0243	molybdopterin cofactor binding
AJAP_34075	COG0596	Alpha beta hydrolase
AJAP_34085	COG0402	S-adenosylhomocysteine deaminase activity
AJAP_34100	COG2267	carboxylic ester hydrolase activity
AJAP_34135	COG0513	Belongs to the DEAD box helicase family
AJAP_34160	COG2095	MarC family integral membrane protein
AJAP_34165	COG0613	PHP domain protein
AJAP_34195	COG0598	Magnesium transport protein CorA
AJAP_34220	COG1309	transcriptional regulator
AJAP_34265	COG1960	acyl-CoA dehydrogenase activity
AJAP_34285	COG0330	HflC and HflK could
AJAP_34295	COG2239	Acts as a magnesium transporter
AJAP_34310	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AJAP_34315	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AJAP_34330	COG1595	DNA-templated transcription, initiation
AJAP_34340	COG2814	Major facilitator Superfamily
AJAP_34345	COG0583	DNA-binding transcription factor activity
AJAP_34350	COG0671	phosphoesterase, PA-phosphatase related
AJAP_34355	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AJAP_34365	COG1024	Enoyl-CoA hydratase
AJAP_34370	COG0519	Catalyzes the synthesis of GMP from XMP
AJAP_34405	COG1271	oxidase subunit
AJAP_34410	COG1294	oxidase, subunit
AJAP_34415	COG4988	ABC transporter
AJAP_34420	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AJAP_34425	COG0463	Glycosyl transferase, family 2
AJAP_34440	COG1611	Belongs to the LOG family
AJAP_34480	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AJAP_34490	COG2171	N-acyltransferase activity
AJAP_34500	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AJAP_34535	COG0778	Nitroreductase
AJAP_34535	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
AJAP_34550	COG1725	Transcriptional regulator
AJAP_34595	COG0438	transferase activity, transferring glycosyl groups
AJAP_34625	COG1316	TRANSCRIPTIONal
AJAP_34630	COG1316	TRANSCRIPTIONal
AJAP_34640	COG2259	Doxx family
AJAP_34660	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_34665	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AJAP_34705	COG0477	Major facilitator Superfamily
AJAP_34715	COG2197	response regulator
AJAP_34720	COG2197	response regulator
AJAP_34735	COG2205	protein histidine kinase activity
AJAP_34745	COG0483	inositol monophosphate 1-phosphatase activity
AJAP_34775	COG3103	Sh3 type 3 domain protein
AJAP_34775	COG0791	NLP P60 protein
AJAP_34775	COG1388	LysM domain
AJAP_34830	COG0640	Transcriptional regulator
AJAP_34845	COG2249	NAD(P)H dehydrogenase (quinone) activity
AJAP_34855	COG4585	Histidine kinase
AJAP_34860	COG2197	response regulator
AJAP_34865	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AJAP_34900	COG1472	Belongs to the glycosyl hydrolase 3 family
AJAP_34905	COG0424	maF-like protein
AJAP_34910	COG1301	dicarboxylic acid transport
AJAP_34925	COG4770	biotin carboxylase activity
AJAP_34950	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AJAP_34955	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AJAP_34960	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AJAP_35000	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
AJAP_35000	COG1473	amidohydrolase
AJAP_35055	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AJAP_35095	COG0667	Aldo Keto reductase
AJAP_35100	COG0667	Aldo Keto reductase
AJAP_35140	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AJAP_35145	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AJAP_35150	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_35155	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_35175	COG0395	ABC-type sugar transport system, permease component
AJAP_35190	COG1063	alcohol dehydrogenase
AJAP_35200	COG1733	regulation of RNA biosynthetic process
AJAP_35230	COG2271	Major facilitator Superfamily
AJAP_35235	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AJAP_35275	COG2009	succinate dehydrogenase
AJAP_35290	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AJAP_35310	COG1404	Belongs to the peptidase S8 family
AJAP_35320	COG1686	Belongs to the peptidase S11 family
AJAP_35325	COG1295	ribonuclease BN
AJAP_35330	COG0180	Tryptophanyl-tRNA synthetase
AJAP_35380	COG1234	tRNA 3'-trailer cleavage
AJAP_35405	COG2264	protein methyltransferase activity
AJAP_35415	COG1522	sequence-specific DNA binding
AJAP_35425	COG0667	Aldo Keto reductase
AJAP_35455	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_35465	COG1959	2 iron, 2 sulfur cluster binding
AJAP_35475	COG1169	isochorismate synthase
AJAP_35485	COG1021	2,3-dihydroxybenzoate-AMP ligase
AJAP_35520	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
AJAP_35525	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AJAP_35570	COG2814	Major facilitator Superfamily
AJAP_35575	COG0640	Transcriptional regulator
AJAP_35580	COG2814	Major facilitator Superfamily
AJAP_35615	COG0587	DNA-directed DNA polymerase activity
AJAP_35655	COG1278	Cold shock
AJAP_35670	COG0138	bifunctional purine biosynthesis protein purh
AJAP_35695	COG0045	succinate-CoA ligase (ADP-forming) activity
AJAP_35710	COG0739	heme binding
AJAP_35760	COG0583	DNA-binding transcription factor activity
AJAP_35800	COG0519	Catalyzes the synthesis of GMP from XMP
AJAP_35800	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AJAP_35815	COG1012	belongs to the aldehyde dehydrogenase family
AJAP_35820	COG0277	FAD linked oxidase domain protein
AJAP_35825	COG1120	ATPase activity
AJAP_35830	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AJAP_35835	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AJAP_35855	COG2318	DinB family
AJAP_35860	COG0516	GMP reductase activity
AJAP_35910	COG0459	protein refolding
AJAP_35915	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AJAP_35920	COG0546	phosphoglycolate phosphatase activity
AJAP_35930	COG1215	transferase activity, transferring glycosyl groups
AJAP_35950	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AJAP_35955	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AJAP_35960	COG0456	acetyltransferase
AJAP_35970	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_35975	COG0825	malonyl-CoA metabolic process
AJAP_35975	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AJAP_35980	COG0802	atpase or kinase
AJAP_35990	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AJAP_35995	COG3842	ATPase activity
AJAP_36000	COG1070	Carbohydrate kinase
AJAP_36005	COG1349	DNA-binding transcription factor activity
AJAP_36015	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AJAP_36040	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AJAP_36070	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AJAP_36075	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AJAP_36080	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AJAP_36110	COG0443	Heat shock 70 kDa protein
AJAP_36115	COG1674	ftsk spoiiie
AJAP_36125	COG1404	Belongs to the peptidase S8 family
AJAP_36160	COG0101	tRNA pseudouridine synthase activity
AJAP_36165	COG0203	ribosomal protein L17
AJAP_36170	COG0202	RNA polymerase activity
AJAP_36175	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AJAP_36180	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AJAP_36190	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AJAP_36210	COG0563	adenylate kinase activity
AJAP_36235	COG0200	Binds to the 23S rRNA
AJAP_36240	COG1841	ribosomal large subunit assembly
AJAP_36245	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AJAP_36255	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AJAP_36260	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AJAP_36270	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AJAP_36275	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AJAP_36280	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AJAP_36285	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AJAP_36290	COG0255	Belongs to the universal ribosomal protein uL29 family
AJAP_36295	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AJAP_36300	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AJAP_36305	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AJAP_36310	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AJAP_36315	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AJAP_36320	COG0089	rRNA binding
AJAP_36325	COG0088	Forms part of the polypeptide exit tunnel
AJAP_36330	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AJAP_36335	COG0051	transcription antitermination factor activity, RNA binding
AJAP_36345	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AJAP_36350	COG0049	tRNA binding
AJAP_36355	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AJAP_36415	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AJAP_36425	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AJAP_36455	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AJAP_36480	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AJAP_36495	COG0222	ribosome binding
AJAP_36500	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AJAP_36515	COG0081	regulation of translation
AJAP_36520	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AJAP_36540	COG0436	Aminotransferase
AJAP_36545	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_36565	COG2030	dehydratase
AJAP_36570	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AJAP_36605	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AJAP_36625	COG0586	Pfam SNARE associated Golgi protein
AJAP_36630	COG4585	Histidine kinase
AJAP_36635	COG2197	response regulator
AJAP_36640	COG0640	Transcriptional regulator
AJAP_36645	COG0346	lactoylglutathione lyase activity
AJAP_36670	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AJAP_36700	COG1666	GTP binding
AJAP_36730	COG0501	Belongs to the peptidase M48B family
AJAP_36760	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AJAP_36775	COG4310	Domain of unknown function (DUF2172)
AJAP_36785	COG1216	Glycosyl transferase, family 2
AJAP_36785	COG0463	Glycosyl transferase, family 2
AJAP_36795	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
AJAP_36850	COG0367	asparagine synthase
AJAP_36870	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AJAP_36890	COG1834	amidinotransferase
AJAP_36895	COG1522	sequence-specific DNA binding
AJAP_36905	COG0674	pyruvate-flavodoxin oxidoreductase activity
AJAP_36905	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AJAP_36910	COG1013	pyruvate-flavodoxin oxidoreductase activity
AJAP_36945	COG1196	nuclear chromosome segregation
AJAP_36985	COG1007	ATP synthesis coupled electron transport
AJAP_36995	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AJAP_37000	COG0713	ATP synthesis coupled electron transport
AJAP_37005	COG0839	Belongs to the complex I subunit 6 family
AJAP_37010	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AJAP_37015	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AJAP_37020	COG1034	ATP synthesis coupled electron transport
AJAP_37035	COG0649	NAD binding
AJAP_37040	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AJAP_37045	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AJAP_37060	COG2226	methyltransferase
AJAP_37070	COG0438	transferase activity, transferring glycosyl groups
AJAP_37095	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
AJAP_37100	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AJAP_37135	COG1522	sequence-specific DNA binding
AJAP_37155	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AJAP_37165	COG0785	Cytochrome C biogenesis protein
AJAP_37175	COG0406	alpha-ribazole phosphatase activity
AJAP_37180	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AJAP_37210	COG1914	H( )-stimulated, divalent metal cation uptake system
AJAP_37215	COG1587	Uroporphyrinogen-III synthase
AJAP_37215	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AJAP_37220	COG0181	hydroxymethylbilane synthase activity
AJAP_37225	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AJAP_37230	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AJAP_37245	COG0318	PFAM AMP-dependent synthetase and ligase
AJAP_37250	COG1595	DNA-templated transcription, initiation
AJAP_37260	COG0560	Phosphoserine phosphatase
AJAP_37285	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AJAP_37315	COG5002	protein histidine kinase activity
AJAP_37330	COG0588	phosphoglycerate mutase activity
AJAP_37345	COG0438	transferase activity, transferring glycosyl groups
AJAP_37360	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AJAP_37390	COG2130	NADP-dependent
AJAP_37415	COG2986	histidine ammonia-lyase
AJAP_37440	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AJAP_37445	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AJAP_37465	COG2733	membrane
AJAP_37485	COG2186	Transcriptional regulator
AJAP_37490	COG2364	Membrane
AJAP_37525	COG3226	Transcriptional regulator
AJAP_37590	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AJAP_37610	COG2233	PERMEase
AJAP_37670	COG1278	Cold shock
AJAP_37685	COG1595	DNA-templated transcription, initiation
AJAP_37705	COG0515	serine threonine protein kinase
AJAP_37740	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AJAP_37760	COG4585	Histidine kinase
AJAP_37765	COG2197	response regulator
AJAP_37780	COG0028	Belongs to the TPP enzyme family
AJAP_37795	COG1132	(ABC) transporter
AJAP_37800	COG1132	(ABC) transporter
AJAP_37810	COG0515	serine threonine protein kinase
AJAP_37850	COG4585	Histidine kinase
AJAP_37855	COG2197	response regulator
AJAP_37865	COG1278	Cold shock
AJAP_37875	COG0789	Transcriptional regulator
AJAP_37880	COG2233	PERMEase
AJAP_37890	COG0402	S-adenosylhomocysteine deaminase activity
AJAP_37940	COG0477	Major facilitator Superfamily
AJAP_37980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AJAP_38005	COG0492	ferredoxin-NADP+ reductase activity
AJAP_38015	COG2072	flavoprotein involved in K transport
AJAP_38025	COG0640	Transcriptional regulator
AJAP_38060	COG2072	flavoprotein involved in K transport
AJAP_38065	COG0798	PFAM Bile acid sodium symporter
AJAP_38105	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AJAP_38115	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AJAP_38125	COG0713	ATP synthesis coupled electron transport
AJAP_38130	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AJAP_38140	COG1007	ATP synthesis coupled electron transport
AJAP_38155	COG2132	Multicopper oxidase
AJAP_38160	COG0785	Cytochrome C biogenesis protein
AJAP_38175	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AJAP_38185	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
AJAP_38190	COG1138	Cytochrome C-type biogenesis protein
AJAP_38205	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AJAP_38230	COG2226	methyltransferase
AJAP_38240	COG0501	Belongs to the peptidase M48B family
AJAP_38285	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AJAP_38310	COG3103	Sh3 type 3 domain protein
AJAP_38310	COG1388	LysM domain
AJAP_38310	COG0791	NLP P60 protein
AJAP_38345	COG0596	Alpha beta hydrolase
AJAP_38365	COG1937	Protein conserved in bacteria
AJAP_38370	COG1937	Protein conserved in bacteria
AJAP_38435	COG0270	DNA (cytosine-5-)-methyltransferase activity
AJAP_38700	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AJAP_38715	COG1832	CoA-binding protein
AJAP_38725	COG1620	l-lactate permease
AJAP_38740	COG4941	Belongs to the sigma-70 factor family
AJAP_38745	COG3795	YCII-related domain
AJAP_38755	COG0583	DNA-binding transcription factor activity
AJAP_38795	COG0640	Transcriptional regulator
AJAP_38840	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AJAP_38870	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AJAP_38875	COG2847	Copper chaperone PCu(A)C
AJAP_38880	COG1329	Transcriptional regulator
AJAP_38885	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AJAP_38890	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AJAP_38910	COG0215	cysteine-tRNA ligase activity
AJAP_38945	COG1309	transcriptional regulator
AJAP_38975	COG0235	Class ii aldolase
AJAP_38990	COG0698	ribose 5-phosphate isomerase
AJAP_38995	COG2376	Dihydroxyacetone kinase
AJAP_39000	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AJAP_39010	COG1349	DNA-binding transcription factor activity
AJAP_39015	COG2814	Major facilitator Superfamily
AJAP_39020	COG1070	Carbohydrate kinase
AJAP_39035	COG4399	Belongs to the UPF0754 family
AJAP_39040	COG4399	Belongs to the UPF0754 family
AJAP_39055	COG1120	ATPase activity
AJAP_39060	COG0803	Belongs to the bacterial solute-binding protein 9 family
AJAP_39065	COG1609	Transcriptional regulator
AJAP_39075	COG1194	a g-specific adenine glycosylase
AJAP_39100	COG1953	Uracil, thiamine, allantoin
AJAP_39120	COG3118	belongs to the thioredoxin family
AJAP_39125	COG0596	Alpha beta hydrolase
AJAP_39145	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AJAP_39180	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
AJAP_39185	COG0443	Heat shock 70 kDa protein
AJAP_39190	COG1396	sequence-specific DNA binding
AJAP_39200	COG0542	response to heat
AJAP_39240	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
AJAP_39245	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
AJAP_39250	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AJAP_39275	COG0789	Transcriptional regulator
AJAP_39290	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AJAP_39300	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AJAP_39330	COG0037	tRNA processing
AJAP_39345	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AJAP_39350	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AJAP_39380	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AJAP_39385	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AJAP_39405	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_39410	COG0657	acetylesterase activity
AJAP_39430	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AJAP_39435	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AJAP_39470	COG2272	Belongs to the type-B carboxylesterase lipase family
AJAP_39475	COG1754	DNA topoisomerase type I activity
AJAP_39475	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AJAP_39505	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
AJAP_39510	COG1205	dead DEAH box helicase
AJAP_39510	COG1111	helicase
AJAP_39560	COG1472	Belongs to the glycosyl hydrolase 3 family
AJAP_39565	COG3876	Protein conserved in bacteria
AJAP_39570	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AJAP_39575	COG1737	Transcriptional regulator
AJAP_39580	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AJAP_39585	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
AJAP_39590	COG2814	Major facilitator Superfamily
AJAP_39595	COG0640	Transcriptional regulator
AJAP_39625	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_39635	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
AJAP_39645	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AJAP_39685	COG3104	oligopeptide transport
AJAP_39690	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AJAP_39700	COG0596	Alpha beta hydrolase
AJAP_39715	COG0494	nUDIX hydrolase
AJAP_39720	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AJAP_39810	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AJAP_39815	COG1408	metallophosphoesterase
AJAP_39845	COG0076	glutamate decarboxylase activity
AJAP_39850	COG0783	Belongs to the Dps family
AJAP_39855	COG1764	response to oxidative stress
AJAP_39890	COG1690	Belongs to the RtcB family
AJAP_39895	COG0501	Belongs to the peptidase M48B family
AJAP_39950	COG2201	protein-glutamate methylesterase activity
AJAP_39975	COG0583	DNA-binding transcription factor activity
AJAP_39980	COG0697	spore germination
AJAP_39990	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_40005	COG4608	Belongs to the ABC transporter superfamily
AJAP_40010	COG0444	Belongs to the ABC transporter superfamily
AJAP_40025	COG0747	negative chemotaxis
AJAP_40040	COG0463	Glycosyl transferase, family 2
AJAP_40055	COG0463	Glycosyl transferase, family 2
AJAP_40060	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AJAP_40065	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AJAP_40070	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AJAP_40075	COG0860	N-Acetylmuramoyl-L-alanine amidase
AJAP_40100	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AJAP_40105	COG2205	protein histidine kinase activity
AJAP_40110	COG0745	RESPONSE REGULATOR receiver
AJAP_40130	COG2197	response regulator
AJAP_40160	COG1250	3-hydroxyacyl-CoA dehydrogenase
AJAP_40210	COG5479	isomerase activity
AJAP_40210	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
AJAP_40215	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
AJAP_40215	COG5479	isomerase activity
AJAP_40250	COG4308	Limonene-1,2-epoxide hydrolase catalytic domain
AJAP_40280	COG3237	CsbD-like
AJAP_40300	COG4702	Belongs to the UPF0303 family
AJAP_40305	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AJAP_40335	COG3973	AAA domain
AJAP_40400	COG0596	Alpha beta hydrolase
AJAP_40405	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AJAP_40410	COG3706	GGDEF domain
AJAP_40410	COG0745	RESPONSE REGULATOR receiver
AJAP_40415	COG1316	TRANSCRIPTIONal
AJAP_40420	COG0704	Plays a role in the regulation of phosphate uptake
AJAP_40425	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AJAP_40450	COG0745	RESPONSE REGULATOR receiver
AJAP_40485	COG4044	May play a role in the intracellular transport of hydrophobic ligands
AJAP_40495	COG1984	allophanate hydrolase subunit 2
AJAP_40515	COG0354	folic acid binding
AJAP_40560	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AJAP_40565	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AJAP_40635	COG1132	(ABC) transporter
AJAP_40640	COG1132	(ABC) transporter
AJAP_40645	COG0047	phosphoribosylformylglycinamidine synthase activity
AJAP_40650	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AJAP_40680	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AJAP_40685	COG2311	Membrane
AJAP_40700	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AJAP_40715	COG1126	abc transporter atp-binding protein
AJAP_40720	COG0765	amino acid transport
AJAP_40725	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AJAP_40730	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AJAP_40740	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AJAP_40780	COG0436	Aminotransferase
AJAP_40795	COG5280	Phage tail tape measure protein TP901
AJAP_40795	COG3953	SLT domain
AJAP_40830	COG0584	glycerophosphoryl diester phosphodiesterase
AJAP_40840	COG2814	Major facilitator Superfamily
AJAP_40855	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AJAP_40880	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AJAP_40885	COG4172	Belongs to the ABC transporter superfamily
AJAP_40890	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_40955	COG0667	Aldo Keto reductase
AJAP_40960	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_40995	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AJAP_41005	COG0586	Pfam SNARE associated Golgi protein
AJAP_41015	COG0477	Major facilitator Superfamily
AJAP_41025	COG3467	pyridoxamine 5'-phosphate
AJAP_41035	COG0477	Major facilitator Superfamily
AJAP_41040	COG0586	Pfam SNARE associated Golgi protein
AJAP_41050	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_41055	COG1072	(Pantothenic acid kinase))
AJAP_41060	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AJAP_41085	COG1609	Transcriptional regulator
AJAP_41100	COG0243	molybdopterin cofactor binding
AJAP_41105	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AJAP_41125	COG1136	(ABC) transporter
AJAP_41125	COG0577	efflux transmembrane transporter activity
AJAP_41150	COG0542	response to heat
AJAP_41185	COG0789	Transcriptional regulator
AJAP_41190	COG0484	heat shock protein binding
AJAP_41195	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AJAP_41200	COG0443	Heat shock 70 kDa protein
AJAP_41235	COG2076	Multidrug Resistance protein
AJAP_41240	COG0247	lactate metabolic process
AJAP_41240	COG2181	nitrate reductase activity
AJAP_41255	COG2340	Cysteine-rich secretory protein family
AJAP_41260	COG1846	Transcriptional regulator
AJAP_41270	COG0717	Belongs to the dCTP deaminase family
AJAP_41290	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AJAP_41310	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AJAP_41345	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AJAP_41355	COG0737	Belongs to the 5'-nucleotidase family
AJAP_41375	COG3663	DNA glycosylase
AJAP_41380	COG2197	response regulator
AJAP_41385	COG1960	acyl-CoA dehydrogenase activity
AJAP_41410	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AJAP_41460	COG0765	amino acid transport
AJAP_41465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AJAP_41485	COG1305	Transglutaminase-like
AJAP_41490	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AJAP_41495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AJAP_41505	COG0596	Alpha beta hydrolase
AJAP_41510	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AJAP_41520	COG0022	dehydrogenase e1 component
AJAP_41525	COG0508	dehydrogenase complex catalyzes the overall conversion of
AJAP_41545	COG3030	protein affecting phage T7 exclusion by the F plasmid
AJAP_41565	COG1309	transcriptional regulator
AJAP_41570	COG2030	dehydratase
AJAP_41575	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_41580	COG0183	Belongs to the thiolase family
AJAP_41605	COG0584	glycerophosphoryl diester phosphodiesterase
AJAP_41610	COG0789	Transcriptional regulator
AJAP_41630	COG0454	-acetyltransferase
AJAP_41630	COG0456	acetyltransferase
AJAP_41685	COG4133	protoheme IX ABC transporter activity
AJAP_41695	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
AJAP_41730	COG4585	Histidine kinase
AJAP_41735	COG2197	response regulator
AJAP_41765	COG1131	(ABC) transporter
AJAP_41780	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AJAP_41795	COG1136	(ABC) transporter
AJAP_41805	COG2197	response regulator
AJAP_41810	COG0402	S-adenosylhomocysteine deaminase activity
AJAP_41815	COG4221	oxidoreductase activity
AJAP_41820	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AJAP_41825	COG2226	methyltransferase
AJAP_41845	COG2814	Major facilitator Superfamily
AJAP_41855	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AJAP_41865	COG1695	Transcriptional regulator
AJAP_41875	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AJAP_41880	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AJAP_41885	COG0673	inositol 2-dehydrogenase activity
AJAP_41890	COG1940	carbohydrate kinase activity
AJAP_41935	COG0360	Binds together with S18 to 16S ribosomal RNA
AJAP_41945	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AJAP_41950	COG0359	binds to the 23S rRNA
AJAP_41980	COG2267	carboxylic ester hydrolase activity
AJAP_41985	COG1309	transcriptional regulator
AJAP_42030	COG3384	dioxygenase
AJAP_42035	COG0738	Major facilitator superfamily
AJAP_42040	COG1846	Transcriptional regulator
AJAP_42040	COG1940	carbohydrate kinase activity
AJAP_42065	COG2197	response regulator
AJAP_42080	COG0477	Major facilitator Superfamily
AJAP_42085	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AJAP_42090	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AJAP_42125	COG1028	Short-chain dehydrogenase reductase Sdr
AJAP_42130	COG0495	leucyl-tRNA aminoacylation
AJAP_42200	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AJAP_42210	COG4585	Histidine kinase
AJAP_42215	COG0617	tRNA 3'-terminal CCA addition
AJAP_42255	COG3118	belongs to the thioredoxin family
AJAP_42255	COG0492	ferredoxin-NADP+ reductase activity
AJAP_42260	COG0860	N-Acetylmuramoyl-L-alanine amidase
AJAP_42260	COG3409	Peptidoglycan-binding domain 1 protein
AJAP_42270	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AJAP_42275	COG1181	Belongs to the D-alanine--D-alanine ligase family
AJAP_42295	COG1192	Involved in chromosome partitioning
AJAP_42300	COG0357	Ribosomal RNA small subunit methyltransferase G
AJAP_42310	COG0706	membrane insertase activity
AJAP_42315	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AJAP_42560	COG2124	cytochrome p450
AJAP_42990	COG2188	Transcriptional regulator