AJAP_00005 SM00382 ATPases associated with a variety of cellular activities AJAP_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AJAP_00015 SM00480 DNA polymerase III beta subunit AJAP_00020 SM01350 AJAP_00020 AJAP_00025 SM00382 ATPases associated with a variety of cellular activities AJAP_00035 SM00387 Histidine kinase-like ATPases AJAP_00035 SM00433 TopoisomeraseII AJAP_00040 SM00434 DNA Topoisomerase IV AJAP_00090 SM00422 helix_turn_helix, mercury resistance AJAP_00105 SM00631 AJAP_00105 AJAP_00195 SM00382 ATPases associated with a variety of cellular activities AJAP_00205 SM00421 helix_turn_helix, Lux Regulon AJAP_00205 SM00448 cheY-homologous receiver domain AJAP_00220 SM00382 ATPases associated with a variety of cellular activities AJAP_00235 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_00235 SM00740 AJAP_00235 AJAP_00240 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_00255 SM00331 Sigma factor PP2C-like phosphatases AJAP_00255 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AJAP_00260 SM00240 Forkhead associated domain AJAP_00265 SM00240 Forkhead associated domain AJAP_00280 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain AJAP_00310 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_00310 SM00895 AJAP_00310 AJAP_00330 SM00382 ATPases associated with a variety of cellular activities AJAP_00335 SM00382 ATPases associated with a variety of cellular activities AJAP_00395 SM01400 AJAP_00395 AJAP_00435 SM00530 Helix-turn-helix XRE-family like proteins AJAP_00445 SM00028 Tetratricopeptide repeats AJAP_00480 SM00382 ATPases associated with a variety of cellular activities AJAP_00515 SM00822 AJAP_00515 AJAP_00520 SM00984 UDP binding domain AJAP_00560 SM00530 Helix-turn-helix XRE-family like proteins AJAP_00585 SM00421 helix_turn_helix, Lux Regulon AJAP_00585 SM00448 cheY-homologous receiver domain AJAP_00590 SM00100 Cyclic nucleotide-monophosphate binding domain AJAP_00590 SM00419 helix_turn_helix, cAMP Regulatory protein AJAP_00630 SM00530 Helix-turn-helix XRE-family like proteins AJAP_00670 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AJAP_00670 SM01232 AJAP_00670 AJAP_00680 SM00387 Histidine kinase-like ATPases AJAP_00690 SM00606 Cellulose Binding Domain Type IV AJAP_00695 SM00448 cheY-homologous receiver domain AJAP_00695 SM00850 LytTr DNA-binding domain AJAP_00720 SM00450 Rhodanese Homology Domain AJAP_00805 SM00327 von Willebrand factor (vWF) type A domain AJAP_00820 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_00835 SM00245 tail specific protease AJAP_00850 SM00382 ATPases associated with a variety of cellular activities AJAP_00855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_00855 SM00387 Histidine kinase-like ATPases AJAP_00860 SM00894 Excalibur calcium-binding domain AJAP_00870 SM00855 Phosphoglycerate mutase family AJAP_00880 SM00382 ATPases associated with a variety of cellular activities AJAP_00890 SM00421 helix_turn_helix, Lux Regulon AJAP_00890 SM00448 cheY-homologous receiver domain AJAP_00900 SM00631 AJAP_00900 AJAP_00905 SM00318 Staphylococcal nuclease homologues AJAP_00905 SM00894 Excalibur calcium-binding domain AJAP_00910 SM00479 AJAP_00910 AJAP_00945 SM00506 Appr-1"-p processing enzyme AJAP_00955 SM00855 Phosphoglycerate mutase family AJAP_01060 SM00862 Transcriptional regulatory protein, C terminal AJAP_01060 SM01043 Bacterial transcriptional activator domain AJAP_01130 SM00822 AJAP_01130 AJAP_01170 SM00563 Phosphate acyltransferases AJAP_01195 SM00014 Acid phosphatase homologues AJAP_01275 SM00382 ATPases associated with a variety of cellular activities AJAP_01300 SM00858 AJAP_01300 AJAP_01340 SM00829 Enoylreductase AJAP_01360 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_01375 SM00458 Ricin-type beta-trefoil AJAP_01410 SM00822 AJAP_01410 AJAP_01435 SM00267 diguanylate cyclase AJAP_01465 SM00421 helix_turn_helix, Lux Regulon AJAP_01480 SM00344 helix_turn_helix ASNC type AJAP_01490 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AJAP_01490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_01505 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_01505 SM00895 AJAP_01505 AJAP_01590 SM00466 SET and RING finger associated domain. Domain of unknown function in SET domain containing proteins and in Deinococcus radiodurans DRA1533. AJAP_01610 SM00028 Tetratricopeptide repeats AJAP_01610 SM00671 Sel1-like repeats. AJAP_01680 SM00382 ATPases associated with a variety of cellular activities AJAP_01780 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_01815 SM00998 Adenylosuccinate lyase C-terminus AJAP_01850 SM00020 Trypsin-like serine protease AJAP_01875 SM00530 Helix-turn-helix XRE-family like proteins AJAP_01900 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AJAP_01900 SM00475 5'-3' exonuclease AJAP_01915 SM00530 Helix-turn-helix XRE-family like proteins AJAP_01980 SM00530 Helix-turn-helix XRE-family like proteins AJAP_01995 SM00382 ATPases associated with a variety of cellular activities AJAP_02030 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_02055 SM00342 helix_turn_helix, arabinose operon control protein AJAP_02105 SM00028 Tetratricopeptide repeats AJAP_02105 SM00862 Transcriptional regulatory protein, C terminal AJAP_02105 SM01043 Bacterial transcriptional activator domain AJAP_02155 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_02155 SM00866 AJAP_02155 AJAP_02195 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_02245 SM00382 ATPases associated with a variety of cellular activities AJAP_02245 SM01072 Cell division protein 48 (CDC48) domain 2 AJAP_02245 SM01073 Cell division protein 48 (CDC48) N-terminal domain AJAP_02275 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_02285 SM00852 Probable molybdopterin binding domain AJAP_02300 SM00357 Cold shock protein domain AJAP_02305 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_02335 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_02350 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AJAP_02355 SM00028 Tetratricopeptide repeats AJAP_02355 SM00862 Transcriptional regulatory protein, C terminal AJAP_02355 SM01043 Bacterial transcriptional activator domain AJAP_02375 SM00487 DEAD-like helicases superfamily AJAP_02375 SM00490 helicase superfamily c-terminal domain AJAP_02390 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_02390 SM00387 Histidine kinase-like ATPases AJAP_02405 SM00382 ATPases associated with a variety of cellular activities AJAP_02425 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_02430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_02430 SM00387 Histidine kinase-like ATPases AJAP_02435 SM00960 Roadblock/LC7 domain AJAP_02450 SM00960 Roadblock/LC7 domain AJAP_02470 SM00919 Malic enzyme, NAD binding domain AJAP_02470 SM01274 AJAP_02470 AJAP_02485 SM00852 Probable molybdopterin binding domain AJAP_02495 SM00257 Lysin motif AJAP_02510 SM00729 Elongator protein 3, MiaB family, Radical SAM AJAP_02515 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_02535 SM00382 ATPases associated with a variety of cellular activities AJAP_02590 SM00357 Cold shock protein domain AJAP_02630 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_02710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_02710 SM00387 Histidine kinase-like ATPases AJAP_02710 SM00388 His Kinase A (phosphoacceptor) domain AJAP_02715 SM00448 cheY-homologous receiver domain AJAP_02715 SM00862 Transcriptional regulatory protein, C terminal AJAP_02720 SM00758 AJAP_02720 AJAP_02720 SM00812 Alpha-L-fucosidase AJAP_02735 SM00382 ATPases associated with a variety of cellular activities AJAP_02765 SM00421 helix_turn_helix, Lux Regulon AJAP_02765 SM00448 cheY-homologous receiver domain AJAP_02770 SM00387 Histidine kinase-like ATPases AJAP_02780 SM00382 ATPases associated with a variety of cellular activities AJAP_02805 SM00822 AJAP_02805 AJAP_02870 SM00960 Roadblock/LC7 domain AJAP_02875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_02880 SM00382 ATPases associated with a variety of cellular activities AJAP_02920 SM00849 Metallo-beta-lactamase superfamily AJAP_02925 SM00849 Metallo-beta-lactamase superfamily AJAP_03000 SM00382 ATPases associated with a variety of cellular activities AJAP_03020 SM00530 Helix-turn-helix XRE-family like proteins AJAP_03045 SM00829 Enoylreductase AJAP_03145 SM00529 Helix-turn-helix diphteria tox regulatory element AJAP_03145 SM00899 AJAP_03145 AJAP_03155 SM00829 Enoylreductase AJAP_03165 SM00797 Allophanate hydrolase subunit 2 AJAP_03170 SM00796 Allophanate hydrolase subunit 1 AJAP_03190 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_03190 SM00895 AJAP_03190 AJAP_03195 SM00458 Ricin-type beta-trefoil AJAP_03280 SM00422 helix_turn_helix, mercury resistance AJAP_03295 SM00020 Trypsin-like serine protease AJAP_03300 SM00822 AJAP_03300 AJAP_03320 SM00507 HNH nucleases AJAP_03335 SM00028 Tetratricopeptide repeats AJAP_03335 SM00862 Transcriptional regulatory protein, C terminal AJAP_03335 SM01043 Bacterial transcriptional activator domain AJAP_03365 SM00530 Helix-turn-helix XRE-family like proteins AJAP_03390 SM00382 ATPases associated with a variety of cellular activities AJAP_03395 SM00382 ATPases associated with a variety of cellular activities AJAP_03480 SM00487 DEAD-like helicases superfamily AJAP_03480 SM00490 helicase superfamily c-terminal domain AJAP_03495 SM00421 helix_turn_helix, Lux Regulon AJAP_03495 SM00448 cheY-homologous receiver domain AJAP_03505 SM00448 cheY-homologous receiver domain AJAP_03505 SM00862 Transcriptional regulatory protein, C terminal AJAP_03510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_03510 SM00387 Histidine kinase-like ATPases AJAP_03510 SM00388 His Kinase A (phosphoacceptor) domain AJAP_03530 SM00420 helix_turn_helix, Deoxyribose operon repressor AJAP_03530 SM01134 AJAP_03530 AJAP_03540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AJAP_03605 SM00448 cheY-homologous receiver domain AJAP_03605 SM00862 Transcriptional regulatory protein, C terminal AJAP_03610 SM00387 Histidine kinase-like ATPases AJAP_03610 SM00388 His Kinase A (phosphoacceptor) domain AJAP_03620 SM00849 Metallo-beta-lactamase superfamily AJAP_03630 SM00852 Probable molybdopterin binding domain AJAP_03650 SM00858 AJAP_03650 AJAP_03655 SM00834 Putative regulatory protein AJAP_03675 SM00530 Helix-turn-helix XRE-family like proteins AJAP_03740 SM00530 Helix-turn-helix XRE-family like proteins AJAP_03760 SM00852 Probable molybdopterin binding domain AJAP_03790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_03810 SM00421 helix_turn_helix, Lux Regulon AJAP_03810 SM00448 cheY-homologous receiver domain AJAP_03830 SM00862 Transcriptional regulatory protein, C terminal AJAP_03870 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_03895 SM00829 Enoylreductase AJAP_03915 SM00382 ATPases associated with a variety of cellular activities AJAP_03935 SM01208 AJAP_03935 AJAP_03950 SM00650 Ribosomal RNA adenine dimethylases AJAP_03955 SM00382 ATPases associated with a variety of cellular activities AJAP_03955 SM00930 AJAP_03955 AJAP_03965 SM00382 ATPases associated with a variety of cellular activities AJAP_04010 SM01400 AJAP_04010 AJAP_04020 SM00267 diguanylate cyclase AJAP_04065 SM00421 helix_turn_helix, Lux Regulon AJAP_04065 SM00448 cheY-homologous receiver domain AJAP_04085 SM00530 Helix-turn-helix XRE-family like proteins AJAP_04095 SM00487 DEAD-like helicases superfamily AJAP_04095 SM00490 helicase superfamily c-terminal domain AJAP_04095 SM00982 AJAP_04095 AJAP_04095 SM01058 CarD-like/TRCF domain AJAP_04110 SM00829 Enoylreductase AJAP_04130 SM00382 ATPases associated with a variety of cellular activities AJAP_04175 SM00530 Helix-turn-helix XRE-family like proteins AJAP_04190 SM01192 AJAP_04190 AJAP_04190 SM01193 AJAP_04190 AJAP_04230 SM00382 ATPases associated with a variety of cellular activities AJAP_04235 SM00382 ATPases associated with a variety of cellular activities AJAP_04265 SM00986 Uracil DNA glycosylase superfamily AJAP_04265 SM00987 UreE urease accessory protein, C-terminal domain AJAP_04290 SM00862 Transcriptional regulatory protein, C terminal AJAP_04310 SM00421 helix_turn_helix, Lux Regulon AJAP_04310 SM00448 cheY-homologous receiver domain AJAP_04330 SM00422 helix_turn_helix, mercury resistance AJAP_04340 SM00855 Phosphoglycerate mutase family AJAP_04365 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_04380 SM00422 helix_turn_helix, mercury resistance AJAP_04400 SM00822 AJAP_04400 AJAP_04445 SM00116 Domain in cystathionine beta-synthase and other proteins. AJAP_04515 SM00344 helix_turn_helix ASNC type AJAP_04520 SM00849 Metallo-beta-lactamase superfamily AJAP_04615 SM00670 Large family of predicted nucleotide-binding domains AJAP_04620 SM01240 AJAP_04620 AJAP_04665 SM00530 Helix-turn-helix XRE-family like proteins AJAP_04690 SM00020 Trypsin-like serine protease AJAP_04750 SM00342 helix_turn_helix, arabinose operon control protein AJAP_04750 SM01009 AlkA N-terminal domain AJAP_04805 SM00248 ankyrin repeats AJAP_04855 SM00382 ATPases associated with a variety of cellular activities AJAP_04870 SM00382 ATPases associated with a variety of cellular activities AJAP_04880 SM00448 cheY-homologous receiver domain AJAP_04880 SM00862 Transcriptional regulatory protein, C terminal AJAP_04885 SM00387 Histidine kinase-like ATPases AJAP_04885 SM00388 His Kinase A (phosphoacceptor) domain AJAP_04910 SM00838 Elongation factor G C-terminus AJAP_04935 SM00382 ATPases associated with a variety of cellular activities AJAP_05010 SM00862 Transcriptional regulatory protein, C terminal AJAP_05010 SM01043 Bacterial transcriptional activator domain AJAP_05035 SM00996 S-adenosyl-L-homocysteine hydrolase AJAP_05035 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AJAP_05075 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_05090 SM00448 cheY-homologous receiver domain AJAP_05090 SM00862 Transcriptional regulatory protein, C terminal AJAP_05095 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_05095 SM00387 Histidine kinase-like ATPases AJAP_05095 SM00388 His Kinase A (phosphoacceptor) domain AJAP_05100 SM00909 Sporulation and spore germination AJAP_05115 SM00957 SecA DEAD-like domain AJAP_05115 SM00958 SecA preprotein cross-linking domain AJAP_05130 SM00967 RNA 2'-O ribose methyltransferase substrate binding AJAP_05205 SM00387 Histidine kinase-like ATPases AJAP_05215 SM00046 Diacylglycerol kinase catalytic domain (presumed) AJAP_05230 SM00855 Phosphoglycerate mutase family AJAP_05255 SM00919 Malic enzyme, NAD binding domain AJAP_05255 SM01274 AJAP_05255 AJAP_05265 SM00382 ATPases associated with a variety of cellular activities AJAP_05305 SM00861 Transketolase, pyrimidine binding domain AJAP_05325 SM00382 ATPases associated with a variety of cellular activities AJAP_05335 SM00382 ATPases associated with a variety of cellular activities AJAP_05360 SM00028 Tetratricopeptide repeats AJAP_05360 SM00862 Transcriptional regulatory protein, C terminal AJAP_05360 SM01043 Bacterial transcriptional activator domain AJAP_05365 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AJAP_05365 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AJAP_05370 SM00829 Enoylreductase AJAP_05430 SM00878 Biotin carboxylase C-terminal domain AJAP_05450 SM00822 AJAP_05450 AJAP_05500 SM00421 helix_turn_helix, Lux Regulon AJAP_05500 SM00448 cheY-homologous receiver domain AJAP_05550 SM00028 Tetratricopeptide repeats AJAP_05550 SM00862 Transcriptional regulatory protein, C terminal AJAP_05550 SM01043 Bacterial transcriptional activator domain AJAP_05575 SM01329 AJAP_05575 AJAP_05585 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_05585 SM00895 AJAP_05585 AJAP_05615 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_05630 SM00729 Elongator protein 3, MiaB family, Radical SAM AJAP_05695 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_05695 SM00895 AJAP_05695 AJAP_05700 SM00776 AJAP_05700 AJAP_05725 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_05765 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_05800 SM00984 UDP binding domain AJAP_05835 SM00382 ATPases associated with a variety of cellular activities AJAP_05900 SM00421 helix_turn_helix, Lux Regulon AJAP_05900 SM00448 cheY-homologous receiver domain AJAP_05910 SM00382 ATPases associated with a variety of cellular activities AJAP_05955 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_06015 SM00836 DALR anticodon binding domain AJAP_06015 SM01016 Arginyl tRNA synthetase N terminal dom AJAP_06040 SM00357 Cold shock protein domain AJAP_06040 SM00382 ATPases associated with a variety of cellular activities AJAP_06040 SM00959 Rho termination factor, N-terminal domain AJAP_06060 SM00937 AJAP_06060 AJAP_06090 SM00422 helix_turn_helix, mercury resistance AJAP_06095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AJAP_06155 SM00382 ATPases associated with a variety of cellular activities AJAP_06190 SM00020 Trypsin-like serine protease AJAP_06225 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_06240 SM00382 ATPases associated with a variety of cellular activities AJAP_06250 SM00342 helix_turn_helix, arabinose operon control protein AJAP_06290 SM00028 Tetratricopeptide repeats AJAP_06320 SM01120 AJAP_06320 AJAP_06350 SM00344 helix_turn_helix ASNC type AJAP_06370 SM00834 Putative regulatory protein AJAP_06385 SM00650 Ribosomal RNA adenine dimethylases AJAP_06390 SM00342 helix_turn_helix, arabinose operon control protein AJAP_06435 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_06450 SM00487 DEAD-like helicases superfamily AJAP_06450 SM00491 AJAP_06450 AJAP_06495 SM00232 JAB/MPN domain AJAP_06530 SM00849 Metallo-beta-lactamase superfamily AJAP_06570 SM01092 CO dehydrogenase flavoprotein C-terminal domain AJAP_06575 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AJAP_06610 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_06665 SM00267 diguanylate cyclase AJAP_06705 SM00387 Histidine kinase-like ATPases AJAP_06710 SM00960 Roadblock/LC7 domain AJAP_06745 SM00060 Fibronectin type 3 domain AJAP_06760 SM00506 Appr-1"-p processing enzyme AJAP_06785 SM00382 ATPases associated with a variety of cellular activities AJAP_06805 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_06805 SM00387 Histidine kinase-like ATPases AJAP_06810 SM00421 helix_turn_helix, Lux Regulon AJAP_06810 SM00448 cheY-homologous receiver domain AJAP_06820 SM00060 Fibronectin type 3 domain AJAP_06820 SM00636 AJAP_06820 AJAP_06825 SM00637 AJAP_06825 AJAP_06830 SM00636 AJAP_06830 AJAP_06830 SM00637 AJAP_06830 AJAP_06875 SM00422 helix_turn_helix, mercury resistance AJAP_06885 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_06885 SM01012 AJAP_06885 AJAP_06890 SM00889 Elongation factor G, domain IV AJAP_06895 SM00710 Parallel beta-helix repeats AJAP_06930 SM00020 Trypsin-like serine protease AJAP_06950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_06995 SM00974 AJAP_06995 AJAP_07105 SM00481 DNA polymerase alpha chain like domain AJAP_07115 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_07135 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_07145 SM00382 ATPases associated with a variety of cellular activities AJAP_07165 SM00422 helix_turn_helix, mercury resistance AJAP_07175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_07180 SM00226 Low molecular weight phosphatase family AJAP_07185 SM00226 Low molecular weight phosphatase family AJAP_07215 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_07240 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_07255 SM00530 Helix-turn-helix XRE-family like proteins AJAP_07280 SM00020 Trypsin-like serine protease AJAP_07310 SM00267 diguanylate cyclase AJAP_07335 SM00858 AJAP_07335 AJAP_07390 SM00257 Lysin motif AJAP_07390 SM00862 Transcriptional regulatory protein, C terminal AJAP_07390 SM01043 Bacterial transcriptional activator domain AJAP_07400 SM00382 ATPases associated with a variety of cellular activities AJAP_07545 SM00479 AJAP_07545 AJAP_07575 SM00478 endonuclease III AJAP_07590 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AJAP_07605 SM00829 Enoylreductase AJAP_07630 SM00382 ATPases associated with a variety of cellular activities AJAP_07650 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_07685 SM00448 cheY-homologous receiver domain AJAP_07685 SM00850 LytTr DNA-binding domain AJAP_07690 SM00387 Histidine kinase-like ATPases AJAP_07710 SM00382 ATPases associated with a variety of cellular activities AJAP_07720 SM00354 helix_turn _helix lactose operon repressor AJAP_07735 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_07790 SM00450 Rhodanese Homology Domain AJAP_07800 SM00382 ATPases associated with a variety of cellular activities AJAP_07835 SM00342 helix_turn_helix, arabinose operon control protein AJAP_07860 SM00507 HNH nucleases AJAP_07920 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_07925 SM00530 Helix-turn-helix XRE-family like proteins AJAP_07930 SM00849 Metallo-beta-lactamase superfamily AJAP_08020 SM00530 Helix-turn-helix XRE-family like proteins AJAP_08090 SM00893 Electron transfer flavoprotein domain AJAP_08095 SM00893 Electron transfer flavoprotein domain AJAP_08105 SM00563 Phosphate acyltransferases AJAP_08110 SM00829 Enoylreductase AJAP_08115 SM00421 helix_turn_helix, Lux Regulon AJAP_08140 SM00849 Metallo-beta-lactamase superfamily AJAP_08160 SM00292 breast cancer carboxy-terminal domain AJAP_08160 SM00532 Ligase N family AJAP_08185 SM00845 GatB domain AJAP_08260 SM00829 Enoylreductase AJAP_08265 SM00248 ankyrin repeats AJAP_08295 SM01329 AJAP_08295 AJAP_08300 SM00917 LeuA allosteric (dimerisation) domain AJAP_08340 SM00829 Enoylreductase AJAP_08370 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_08375 SM00421 helix_turn_helix, Lux Regulon AJAP_08400 SM00421 helix_turn_helix, Lux Regulon AJAP_08400 SM00448 cheY-homologous receiver domain AJAP_08460 SM01012 AJAP_08460 AJAP_08540 SM00060 Fibronectin type 3 domain AJAP_08555 SM00460 Transglutaminase/protease-like homologues AJAP_08595 SM00382 ATPases associated with a variety of cellular activities AJAP_08645 SM00387 Histidine kinase-like ATPases AJAP_08645 SM00388 His Kinase A (phosphoacceptor) domain AJAP_08650 SM00448 cheY-homologous receiver domain AJAP_08650 SM00862 Transcriptional regulatory protein, C terminal AJAP_08655 SM00421 helix_turn_helix, Lux Regulon AJAP_08660 SM00382 ATPases associated with a variety of cellular activities AJAP_08660 SM00710 Parallel beta-helix repeats AJAP_08665 SM00448 cheY-homologous receiver domain AJAP_08665 SM00862 Transcriptional regulatory protein, C terminal AJAP_08675 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_08690 SM00411 bacterial (prokaryotic) histone like domain AJAP_08695 SM00855 Phosphoglycerate mutase family AJAP_08710 SM00563 Phosphate acyltransferases AJAP_08725 SM00870 AJAP_08725 AJAP_08750 SM00900 AJAP_08750 AJAP_08760 SM00448 cheY-homologous receiver domain AJAP_08760 SM00862 Transcriptional regulatory protein, C terminal AJAP_08765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_08765 SM00387 Histidine kinase-like ATPases AJAP_08765 SM00388 His Kinase A (phosphoacceptor) domain AJAP_08775 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_08780 SM00829 Enoylreductase AJAP_08815 SM00986 Uracil DNA glycosylase superfamily AJAP_08815 SM00987 UreE urease accessory protein, C-terminal domain AJAP_08825 SM01120 AJAP_08825 AJAP_08825 SM01121 AJAP_08825 AJAP_08830 SM00487 DEAD-like helicases superfamily AJAP_08830 SM00490 helicase superfamily c-terminal domain AJAP_08875 SM00878 Biotin carboxylase C-terminal domain AJAP_08970 SM00320 WD40 repeats AJAP_08970 SM00530 Helix-turn-helix XRE-family like proteins AJAP_09030 SM00358 Double-stranded RNA binding motif AJAP_09030 SM00535 Ribonuclease III family AJAP_09040 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AJAP_09040 SM01232 AJAP_09040 AJAP_09070 SM00382 ATPases associated with a variety of cellular activities AJAP_09075 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_09095 SM01230 AJAP_09095 AJAP_09135 SM00729 Elongator protein 3, MiaB family, Radical SAM AJAP_09145 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_09145 SM00895 AJAP_09145 AJAP_09155 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_09170 SM00382 ATPases associated with a variety of cellular activities AJAP_09175 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_09210 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AJAP_09215 SM00822 AJAP_09215 AJAP_09225 SM00382 ATPases associated with a variety of cellular activities AJAP_09235 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_09235 SM00895 AJAP_09235 AJAP_09320 SM00882 Coenzyme A transferase AJAP_09325 SM00882 Coenzyme A transferase AJAP_09355 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_09365 SM00382 ATPases associated with a variety of cellular activities AJAP_09385 SM00327 von Willebrand factor (vWF) type A domain AJAP_09395 SM00344 helix_turn_helix ASNC type AJAP_09410 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AJAP_09415 SM01092 CO dehydrogenase flavoprotein C-terminal domain AJAP_09435 SM00823 Phosphopantetheine attachment site AJAP_09435 SM00824 Thioesterase AJAP_09470 SM00382 ATPases associated with a variety of cellular activities AJAP_09490 SM00354 helix_turn _helix lactose operon repressor AJAP_09505 SM00028 Tetratricopeptide repeats AJAP_09505 SM00862 Transcriptional regulatory protein, C terminal AJAP_09505 SM01043 Bacterial transcriptional activator domain AJAP_09510 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_09515 SM00382 ATPases associated with a variety of cellular activities AJAP_09555 SM00387 Histidine kinase-like ATPases AJAP_09555 SM00388 His Kinase A (phosphoacceptor) domain AJAP_09560 SM00448 cheY-homologous receiver domain AJAP_09560 SM00862 Transcriptional regulatory protein, C terminal AJAP_09570 SM00968 SMC proteins Flexible Hinge Domain AJAP_09590 SM00382 ATPases associated with a variety of cellular activities AJAP_09590 SM00962 SRP54-type protein, GTPase domain AJAP_09590 SM00963 SRP54-type protein, helical bundle domain AJAP_09605 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_09620 SM00507 HNH nucleases AJAP_09635 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_09645 SM01092 CO dehydrogenase flavoprotein C-terminal domain AJAP_09660 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AJAP_09730 SM00881 CoA binding domain AJAP_09765 SM00421 helix_turn_helix, Lux Regulon AJAP_09785 SM00938 Nitrogen regulatory protein P-II AJAP_09790 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AJAP_09800 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AJAP_09820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_09830 SM00382 ATPases associated with a variety of cellular activities AJAP_09830 SM00962 SRP54-type protein, GTPase domain AJAP_09830 SM00963 SRP54-type protein, helical bundle domain AJAP_09895 SM00382 ATPases associated with a variety of cellular activities AJAP_10005 SM00342 helix_turn_helix, arabinose operon control protein AJAP_10045 SM01012 AJAP_10045 AJAP_10065 SM00829 Enoylreductase AJAP_10070 SM00530 Helix-turn-helix XRE-family like proteins AJAP_10085 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_10105 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_10110 SM01018 B12 binding domain AJAP_10175 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_10175 SM00895 AJAP_10175 AJAP_10200 SM00020 Trypsin-like serine protease AJAP_10215 SM00487 DEAD-like helicases superfamily AJAP_10215 SM00490 helicase superfamily c-terminal domain AJAP_10220 SM00090 RIO-like kinase AJAP_10225 SM00028 Tetratricopeptide repeats AJAP_10225 SM00421 helix_turn_helix, Lux Regulon AJAP_10245 SM00020 Trypsin-like serine protease AJAP_10325 SM00530 Helix-turn-helix XRE-family like proteins AJAP_10335 SM00421 helix_turn_helix, Lux Regulon AJAP_10335 SM00448 cheY-homologous receiver domain AJAP_10370 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AJAP_10370 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AJAP_10425 SM00825 Beta-ketoacyl synthase AJAP_10440 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_10495 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_10525 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_10525 SM00895 AJAP_10525 AJAP_10540 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AJAP_10560 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_10560 SM00895 AJAP_10560 AJAP_10580 SM00481 DNA polymerase alpha chain like domain AJAP_10630 SM00729 Elongator protein 3, MiaB family, Radical SAM AJAP_10665 SM00014 Acid phosphatase homologues AJAP_10675 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_10700 SM00860 SMI1 / KNR4 family AJAP_10745 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_10745 SM00866 AJAP_10745 AJAP_10785 SM00860 SMI1 / KNR4 family AJAP_10815 SM00342 helix_turn_helix, arabinose operon control protein AJAP_10825 SM00342 helix_turn_helix, arabinose operon control protein AJAP_10870 SM00465 GIY-YIG type nucleases (URI domain) AJAP_10870 SM00479 AJAP_10870 AJAP_10920 SM00947 Carbonic anhydrase AJAP_10925 SM00947 Carbonic anhydrase AJAP_10935 SM00729 Elongator protein 3, MiaB family, Radical SAM AJAP_10935 SM00876 Biotin and Thiamin Synthesis associated domain AJAP_10950 SM00464 Found in ATP-dependent protease La (LON) AJAP_11015 SM00020 Trypsin-like serine protease AJAP_11035 SM00507 HNH nucleases AJAP_11050 SM00382 ATPases associated with a variety of cellular activities AJAP_11095 SM00421 helix_turn_helix, Lux Regulon AJAP_11095 SM00448 cheY-homologous receiver domain AJAP_11100 SM00421 helix_turn_helix, Lux Regulon AJAP_11100 SM00448 cheY-homologous receiver domain AJAP_11110 SM00344 helix_turn_helix ASNC type AJAP_11145 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_11175 SM00422 helix_turn_helix, mercury resistance AJAP_11185 SM00861 Transketolase, pyrimidine binding domain AJAP_11230 SM00382 ATPases associated with a variety of cellular activities AJAP_11235 SM00829 Enoylreductase AJAP_11325 SM01230 AJAP_11325 AJAP_11350 SM00822 AJAP_11350 AJAP_11425 SM00864 Tubulin/FtsZ family, GTPase domain AJAP_11425 SM00865 Tubulin/FtsZ family, C-terminal domain AJAP_11470 SM00507 HNH nucleases AJAP_11485 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_11515 SM00363 S4 RNA-binding domain AJAP_11585 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AJAP_11635 SM00382 ATPases associated with a variety of cellular activities AJAP_11650 SM00606 Cellulose Binding Domain Type IV AJAP_11665 SM00341 Helicase and RNase D C-terminal AJAP_11665 SM00487 DEAD-like helicases superfamily AJAP_11665 SM00490 helicase superfamily c-terminal domain AJAP_11665 SM00956 AJAP_11665 AJAP_11670 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_11715 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_11745 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_11760 SM00422 helix_turn_helix, mercury resistance AJAP_11785 SM00028 Tetratricopeptide repeats AJAP_11785 SM00862 Transcriptional regulatory protein, C terminal AJAP_11785 SM01043 Bacterial transcriptional activator domain AJAP_11795 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AJAP_11800 SM00873 B3/4 domain AJAP_11830 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_11885 SM00421 helix_turn_helix, Lux Regulon AJAP_11885 SM00448 cheY-homologous receiver domain AJAP_11890 SM00098 Alkaline phosphatase homologues AJAP_11915 SM00331 Sigma factor PP2C-like phosphatases AJAP_11920 SM00331 Sigma factor PP2C-like phosphatases AJAP_11925 SM00387 Histidine kinase-like ATPases AJAP_11940 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_11945 SM00331 Sigma factor PP2C-like phosphatases AJAP_12000 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AJAP_12015 SM00382 ATPases associated with a variety of cellular activities AJAP_12015 SM00421 helix_turn_helix, Lux Regulon AJAP_12025 SM00020 Trypsin-like serine protease AJAP_12050 SM00448 cheY-homologous receiver domain AJAP_12050 SM01012 AJAP_12050 AJAP_12085 SM00886 Stress responsive A/B Barrel Domain AJAP_12095 SM00344 helix_turn_helix ASNC type AJAP_12135 SM00354 helix_turn _helix lactose operon repressor AJAP_12165 SM00984 UDP binding domain AJAP_12170 SM00054 EF-hand, calcium binding motif AJAP_12250 SM00020 Trypsin-like serine protease AJAP_12255 SM00342 helix_turn_helix, arabinose operon control protein AJAP_12275 SM00028 Tetratricopeptide repeats AJAP_12280 SM00028 Tetratricopeptide repeats AJAP_12290 SM00823 Phosphopantetheine attachment site AJAP_12290 SM00824 Thioesterase AJAP_12295 SM00823 Phosphopantetheine attachment site AJAP_12300 SM00028 Tetratricopeptide repeats AJAP_12300 SM00530 Helix-turn-helix XRE-family like proteins AJAP_12305 SM00530 Helix-turn-helix XRE-family like proteins AJAP_12335 SM00421 helix_turn_helix, Lux Regulon AJAP_12360 SM00421 helix_turn_helix, Lux Regulon AJAP_12360 SM00448 cheY-homologous receiver domain AJAP_12380 SM00984 UDP binding domain AJAP_12405 SM00822 AJAP_12405 AJAP_12405 SM00823 Phosphopantetheine attachment site AJAP_12405 SM00825 Beta-ketoacyl synthase AJAP_12405 SM00826 AJAP_12405 AJAP_12405 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_12405 SM00829 Enoylreductase AJAP_12405 SM01294 AJAP_12405 AJAP_12410 SM00822 AJAP_12410 AJAP_12410 SM00823 Phosphopantetheine attachment site AJAP_12410 SM00825 Beta-ketoacyl synthase AJAP_12410 SM00826 AJAP_12410 AJAP_12410 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_12410 SM00829 Enoylreductase AJAP_12410 SM01294 AJAP_12410 AJAP_12415 SM00822 AJAP_12415 AJAP_12415 SM00823 Phosphopantetheine attachment site AJAP_12415 SM00825 Beta-ketoacyl synthase AJAP_12415 SM00826 AJAP_12415 AJAP_12415 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_12415 SM01294 AJAP_12415 AJAP_12420 SM00822 AJAP_12420 AJAP_12420 SM00823 Phosphopantetheine attachment site AJAP_12420 SM00825 Beta-ketoacyl synthase AJAP_12420 SM00826 AJAP_12420 AJAP_12420 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_12420 SM01294 AJAP_12420 AJAP_12425 SM00822 AJAP_12425 AJAP_12425 SM00823 Phosphopantetheine attachment site AJAP_12425 SM00825 Beta-ketoacyl synthase AJAP_12425 SM00826 AJAP_12425 AJAP_12425 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_12425 SM01294 AJAP_12425 AJAP_12430 SM00822 AJAP_12430 AJAP_12430 SM00823 Phosphopantetheine attachment site AJAP_12430 SM00824 Thioesterase AJAP_12430 SM00825 Beta-ketoacyl synthase AJAP_12430 SM00826 AJAP_12430 AJAP_12430 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_12430 SM01294 AJAP_12430 AJAP_12450 SM00824 Thioesterase AJAP_12475 SM00342 helix_turn_helix, arabinose operon control protein AJAP_12480 SM00849 Metallo-beta-lactamase superfamily AJAP_12520 SM00342 helix_turn_helix, arabinose operon control protein AJAP_12535 SM00862 Transcriptional regulatory protein, C terminal AJAP_12535 SM01043 Bacterial transcriptional activator domain AJAP_12545 SM00382 ATPases associated with a variety of cellular activities AJAP_12630 SM00421 helix_turn_helix, Lux Regulon AJAP_12630 SM00448 cheY-homologous receiver domain AJAP_12650 SM00226 Low molecular weight phosphatase family AJAP_12650 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_12665 SM00947 Carbonic anhydrase AJAP_12670 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_12685 SM00421 helix_turn_helix, Lux Regulon AJAP_12725 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_12740 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AJAP_12775 SM00248 ankyrin repeats AJAP_12790 SM00421 helix_turn_helix, Lux Regulon AJAP_12790 SM00448 cheY-homologous receiver domain AJAP_12800 SM00530 Helix-turn-helix XRE-family like proteins AJAP_12805 SM00960 Roadblock/LC7 domain AJAP_12865 SM00382 ATPases associated with a variety of cellular activities AJAP_12870 SM01329 AJAP_12870 AJAP_12905 SM00829 Enoylreductase AJAP_12970 SM00421 helix_turn_helix, Lux Regulon AJAP_12980 SM00530 Helix-turn-helix XRE-family like proteins AJAP_12985 SM00421 helix_turn_helix, Lux Regulon AJAP_12990 SM00421 helix_turn_helix, Lux Regulon AJAP_13005 SM00382 ATPases associated with a variety of cellular activities AJAP_13015 SM00507 HNH nucleases AJAP_13040 SM00382 ATPases associated with a variety of cellular activities AJAP_13050 SM00421 helix_turn_helix, Lux Regulon AJAP_13050 SM00448 cheY-homologous receiver domain AJAP_13055 SM00530 Helix-turn-helix XRE-family like proteins AJAP_13085 SM00422 helix_turn_helix, mercury resistance AJAP_13095 SM00422 helix_turn_helix, mercury resistance AJAP_13115 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AJAP_13115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_13160 SM00420 helix_turn_helix, Deoxyribose operon repressor AJAP_13160 SM01134 AJAP_13160 AJAP_13190 SM00421 helix_turn_helix, Lux Regulon AJAP_13190 SM00862 Transcriptional regulatory protein, C terminal AJAP_13190 SM01043 Bacterial transcriptional activator domain AJAP_13195 SM00862 Transcriptional regulatory protein, C terminal AJAP_13195 SM01043 Bacterial transcriptional activator domain AJAP_13205 SM00421 helix_turn_helix, Lux Regulon AJAP_13215 SM00054 EF-hand, calcium binding motif AJAP_13245 SM00342 helix_turn_helix, arabinose operon control protein AJAP_13250 SM00530 Helix-turn-helix XRE-family like proteins AJAP_13290 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_13320 SM00382 ATPases associated with a variety of cellular activities AJAP_13325 SM00382 ATPases associated with a variety of cellular activities AJAP_13340 SM00421 helix_turn_helix, Lux Regulon AJAP_13370 SM00382 ATPases associated with a variety of cellular activities AJAP_13415 SM00421 helix_turn_helix, Lux Regulon AJAP_13415 SM00448 cheY-homologous receiver domain AJAP_13455 SM00327 von Willebrand factor (vWF) type A domain AJAP_13470 SM00849 Metallo-beta-lactamase superfamily AJAP_13510 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_13510 SM00866 AJAP_13510 AJAP_13560 SM00382 ATPases associated with a variety of cellular activities AJAP_13570 SM00420 helix_turn_helix, Deoxyribose operon repressor AJAP_13570 SM01134 AJAP_13570 AJAP_13585 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_13610 SM00382 ATPases associated with a variety of cellular activities AJAP_13615 SM00382 ATPases associated with a variety of cellular activities AJAP_13650 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AJAP_13650 SM00474 3'-5' exonuclease AJAP_13650 SM00475 5'-3' exonuclease AJAP_13650 SM00482 DNA polymerase A domain AJAP_13660 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_13665 SM00327 von Willebrand factor (vWF) type A domain AJAP_13695 SM00382 ATPases associated with a variety of cellular activities AJAP_13715 SM00316 Ribosomal protein S1-like RNA-binding domain AJAP_13760 SM00487 DEAD-like helicases superfamily AJAP_13760 SM00490 helicase superfamily c-terminal domain AJAP_13785 SM00382 ATPases associated with a variety of cellular activities AJAP_13785 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AJAP_13800 SM00953 AJAP_13800 AJAP_13810 SM00354 helix_turn _helix lactose operon repressor AJAP_13820 SM00342 helix_turn_helix, arabinose operon control protein AJAP_13840 SM00855 Phosphoglycerate mutase family AJAP_13855 SM00342 helix_turn_helix, arabinose operon control protein AJAP_13890 SM00507 HNH nucleases AJAP_13910 SM00422 helix_turn_helix, mercury resistance AJAP_13910 SM00871 Bacterial transcription activator, effector binding domain AJAP_13915 SM00812 Alpha-L-fucosidase AJAP_13965 SM00849 Metallo-beta-lactamase superfamily AJAP_14025 SM00091 PAS domain AJAP_14025 SM00387 Histidine kinase-like ATPases AJAP_14030 SM00448 cheY-homologous receiver domain AJAP_14035 SM00422 helix_turn_helix, mercury resistance AJAP_14040 SM00829 Enoylreductase AJAP_14100 SM01119 AJAP_14100 AJAP_14110 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_14125 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_14125 SM00895 AJAP_14125 AJAP_14160 SM00873 B3/4 domain AJAP_14160 SM00874 tRNA synthetase B5 domain AJAP_14160 SM00896 Ferredoxin-fold anticodon binding domain AJAP_14165 SM00028 Tetratricopeptide repeats AJAP_14195 SM00859 Semialdehyde dehydrogenase, NAD binding domain AJAP_14285 SM00363 S4 RNA-binding domain AJAP_14320 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_14320 SM00895 AJAP_14320 AJAP_14375 SM00363 S4 RNA-binding domain AJAP_14380 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AJAP_14420 SM00563 Phosphate acyltransferases AJAP_14425 SM00382 ATPases associated with a variety of cellular activities AJAP_14430 SM00823 Phosphopantetheine attachment site AJAP_14475 SM00422 helix_turn_helix, mercury resistance AJAP_14480 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_14505 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_14515 SM01130 AJAP_14515 AJAP_14520 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AJAP_14560 SM00028 Tetratricopeptide repeats AJAP_14560 SM00862 Transcriptional regulatory protein, C terminal AJAP_14560 SM01043 Bacterial transcriptional activator domain AJAP_14585 SM00052 Putative diguanylate phosphodiesterase AJAP_14585 SM00091 PAS domain AJAP_14585 SM00267 diguanylate cyclase AJAP_14590 SM00327 von Willebrand factor (vWF) type A domain AJAP_14660 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_14690 SM00862 Transcriptional regulatory protein, C terminal AJAP_14690 SM01043 Bacterial transcriptional activator domain AJAP_14700 SM00382 ATPases associated with a variety of cellular activities AJAP_14705 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_14705 SM00866 AJAP_14705 AJAP_14720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AJAP_14775 SM00421 helix_turn_helix, Lux Regulon AJAP_14775 SM00448 cheY-homologous receiver domain AJAP_14780 SM00028 Tetratricopeptide repeats AJAP_14780 SM00862 Transcriptional regulatory protein, C terminal AJAP_14780 SM01043 Bacterial transcriptional activator domain AJAP_14790 SM01057 Eukaryotic-type carbonic anhydrase AJAP_14845 SM00829 Enoylreductase AJAP_14860 SM00382 ATPases associated with a variety of cellular activities AJAP_14880 SM00829 Enoylreductase AJAP_14955 SM00342 helix_turn_helix, arabinose operon control protein AJAP_14990 SM00421 helix_turn_helix, Lux Regulon AJAP_14995 SM00020 Trypsin-like serine protease AJAP_15025 SM00382 ATPases associated with a variety of cellular activities AJAP_15030 SM00382 ATPases associated with a variety of cellular activities AJAP_15090 SM00495 Chitin-binding domain type 3 AJAP_15130 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AJAP_15210 SM00422 helix_turn_helix, mercury resistance AJAP_15230 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_15265 SM00344 helix_turn_helix ASNC type AJAP_15305 SM00822 AJAP_15305 AJAP_15305 SM00825 Beta-ketoacyl synthase AJAP_15305 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_15310 SM00825 Beta-ketoacyl synthase AJAP_15310 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_15335 SM00382 ATPases associated with a variety of cellular activities AJAP_15440 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_15445 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_15475 SM00823 Phosphopantetheine attachment site AJAP_15475 SM00825 Beta-ketoacyl synthase AJAP_15475 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_15495 SM00822 AJAP_15495 AJAP_15510 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_15535 SM00331 Sigma factor PP2C-like phosphatases AJAP_15535 SM00448 cheY-homologous receiver domain AJAP_15540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_15540 SM00387 Histidine kinase-like ATPases AJAP_15540 SM00388 His Kinase A (phosphoacceptor) domain AJAP_15545 SM00448 cheY-homologous receiver domain AJAP_15565 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_15575 SM00382 ATPases associated with a variety of cellular activities AJAP_15590 SM00382 ATPases associated with a variety of cellular activities AJAP_15615 SM00382 ATPases associated with a variety of cellular activities AJAP_15625 SM00344 helix_turn_helix ASNC type AJAP_15650 SM00060 Fibronectin type 3 domain AJAP_15665 SM01065 Starch binding domain AJAP_15670 SM00155 Phospholipase D. Active site motifs. AJAP_15675 SM00530 Helix-turn-helix XRE-family like proteins AJAP_15715 SM00028 Tetratricopeptide repeats AJAP_15715 SM00862 Transcriptional regulatory protein, C terminal AJAP_15715 SM01043 Bacterial transcriptional activator domain AJAP_15720 SM00862 Transcriptional regulatory protein, C terminal AJAP_15720 SM01043 Bacterial transcriptional activator domain AJAP_15725 SM01260 AJAP_15725 AJAP_15735 SM00382 ATPases associated with a variety of cellular activities AJAP_15755 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_15780 SM01092 CO dehydrogenase flavoprotein C-terminal domain AJAP_15785 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AJAP_15815 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_15815 SM00320 WD40 repeats AJAP_15820 SM00530 Helix-turn-helix XRE-family like proteins AJAP_15830 SM01192 AJAP_15830 AJAP_15830 SM01193 AJAP_15830 AJAP_15835 SM00382 ATPases associated with a variety of cellular activities AJAP_15850 SM00421 helix_turn_helix, Lux Regulon AJAP_15850 SM00448 cheY-homologous receiver domain AJAP_15870 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AJAP_15870 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AJAP_15875 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_15915 SM00382 ATPases associated with a variety of cellular activities AJAP_15920 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_16020 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_16025 SM00226 Low molecular weight phosphatase family AJAP_16040 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_16085 SM00421 helix_turn_helix, Lux Regulon AJAP_16090 SM00829 Enoylreductase AJAP_16095 SM00849 Metallo-beta-lactamase superfamily AJAP_16160 SM00860 SMI1 / KNR4 family AJAP_16240 SM00823 Phosphopantetheine attachment site AJAP_16245 SM00729 Elongator protein 3, MiaB family, Radical SAM AJAP_16295 SM00823 Phosphopantetheine attachment site AJAP_16350 SM00342 helix_turn_helix, arabinose operon control protein AJAP_16380 SM00829 Enoylreductase AJAP_16390 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_16410 SM00382 ATPases associated with a variety of cellular activities AJAP_16415 SM00448 cheY-homologous receiver domain AJAP_16415 SM00862 Transcriptional regulatory protein, C terminal AJAP_16420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_16420 SM00387 Histidine kinase-like ATPases AJAP_16420 SM00388 His Kinase A (phosphoacceptor) domain AJAP_16465 SM00862 Transcriptional regulatory protein, C terminal AJAP_16465 SM01043 Bacterial transcriptional activator domain AJAP_16545 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AJAP_16555 SM00867 YceI-like domain AJAP_16560 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_16590 SM00382 ATPases associated with a variety of cellular activities AJAP_16590 SM00838 Elongation factor G C-terminus AJAP_16590 SM00889 Elongation factor G, domain IV AJAP_16620 SM00028 Tetratricopeptide repeats AJAP_16620 SM00862 Transcriptional regulatory protein, C terminal AJAP_16620 SM01043 Bacterial transcriptional activator domain AJAP_16640 SM00530 Helix-turn-helix XRE-family like proteins AJAP_16685 SM00382 ATPases associated with a variety of cellular activities AJAP_16690 SM01323 AJAP_16690 AJAP_16710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AJAP_16710 SM00954 Region found in RelA / SpoT proteins AJAP_16735 SM00849 Metallo-beta-lactamase superfamily AJAP_16755 SM00342 helix_turn_helix, arabinose operon control protein AJAP_16765 SM00028 Tetratricopeptide repeats AJAP_16765 SM00862 Transcriptional regulatory protein, C terminal AJAP_16765 SM01043 Bacterial transcriptional activator domain AJAP_16780 SM00880 AJAP_16780 AJAP_16780 SM01118 AJAP_16780 AJAP_16795 SM00382 ATPases associated with a variety of cellular activities AJAP_16800 SM00382 ATPases associated with a variety of cellular activities AJAP_16810 SM00387 Histidine kinase-like ATPases AJAP_16815 SM00960 Roadblock/LC7 domain AJAP_16835 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AJAP_16855 SM00996 S-adenosyl-L-homocysteine hydrolase AJAP_16855 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AJAP_16895 SM00422 helix_turn_helix, mercury resistance AJAP_16895 SM00871 Bacterial transcription activator, effector binding domain AJAP_16915 SM00947 Carbonic anhydrase AJAP_16920 SM00881 CoA binding domain AJAP_16925 SM01209 AJAP_16925 AJAP_16940 SM00881 CoA binding domain AJAP_16950 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_16950 SM00895 AJAP_16950 AJAP_16965 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AJAP_16970 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AJAP_17000 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_17020 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_17020 SM00895 AJAP_17020 AJAP_17065 SM00344 helix_turn_helix ASNC type AJAP_17095 SM01012 AJAP_17095 AJAP_17110 SM00421 helix_turn_helix, Lux Regulon AJAP_17110 SM00448 cheY-homologous receiver domain AJAP_17115 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AJAP_17115 SM00091 PAS domain AJAP_17115 SM00387 Histidine kinase-like ATPases AJAP_17120 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_17120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_17120 SM00387 Histidine kinase-like ATPases AJAP_17120 SM00388 His Kinase A (phosphoacceptor) domain AJAP_17120 SM00448 cheY-homologous receiver domain AJAP_17125 SM00448 cheY-homologous receiver domain AJAP_17130 SM01012 AJAP_17130 AJAP_17135 SM00421 helix_turn_helix, Lux Regulon AJAP_17135 SM00448 cheY-homologous receiver domain AJAP_17145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_17170 SM00342 helix_turn_helix, arabinose operon control protein AJAP_17180 SM00421 helix_turn_helix, Lux Regulon AJAP_17195 SM00903 Flavin reductase like domain AJAP_17260 SM00507 HNH nucleases AJAP_17265 SM00382 ATPases associated with a variety of cellular activities AJAP_17295 SM00354 helix_turn _helix lactose operon repressor AJAP_17300 SM00354 helix_turn _helix lactose operon repressor AJAP_17310 SM00382 ATPases associated with a variety of cellular activities AJAP_17330 SM01007 Class II Aldolase and Adducin N-terminal domain AJAP_17345 SM00382 ATPases associated with a variety of cellular activities AJAP_17355 SM00813 Alpha-L-arabinofuranosidase C-terminus AJAP_17365 SM00560 LamG-like jellyroll fold domain AJAP_17365 SM01038 Beta galactosidase small chain AJAP_17395 SM00507 HNH nucleases AJAP_17420 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_17420 SM00895 AJAP_17420 AJAP_17435 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_17440 SM00903 Flavin reductase like domain AJAP_17535 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_17535 SM00419 helix_turn_helix, cAMP Regulatory protein AJAP_17585 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_17595 SM00354 helix_turn _helix lactose operon repressor AJAP_17615 SM00813 Alpha-L-arabinofuranosidase C-terminus AJAP_17625 SM00448 cheY-homologous receiver domain AJAP_17625 SM00862 Transcriptional regulatory protein, C terminal AJAP_17630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_17630 SM00387 Histidine kinase-like ATPases AJAP_17630 SM00388 His Kinase A (phosphoacceptor) domain AJAP_17650 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_17680 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_17680 SM00895 AJAP_17680 AJAP_17725 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AJAP_17765 SM00382 ATPases associated with a variety of cellular activities AJAP_17770 SM00382 ATPases associated with a variety of cellular activities AJAP_17785 SM00421 helix_turn_helix, Lux Regulon AJAP_17785 SM00448 cheY-homologous receiver domain AJAP_17790 SM00387 Histidine kinase-like ATPases AJAP_17815 SM00344 helix_turn_helix ASNC type AJAP_17830 SM00822 AJAP_17830 AJAP_17855 SM00387 Histidine kinase-like ATPases AJAP_17860 SM00903 Flavin reductase like domain AJAP_17875 SM00421 helix_turn_helix, Lux Regulon AJAP_17875 SM00448 cheY-homologous receiver domain AJAP_17895 SM00382 ATPases associated with a variety of cellular activities AJAP_17935 SM00421 helix_turn_helix, Lux Regulon AJAP_17935 SM00448 cheY-homologous receiver domain AJAP_17945 SM00354 helix_turn _helix lactose operon repressor AJAP_17955 SM00382 ATPases associated with a variety of cellular activities AJAP_18000 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_18035 SM00838 Elongation factor G C-terminus AJAP_18035 SM00889 Elongation factor G, domain IV AJAP_18040 SM01110 AJAP_18040 AJAP_18060 SM00861 Transketolase, pyrimidine binding domain AJAP_18070 SM00344 helix_turn_helix ASNC type AJAP_18075 SM00344 helix_turn_helix ASNC type AJAP_18125 SM00342 helix_turn_helix, arabinose operon control protein AJAP_18145 SM00822 AJAP_18145 AJAP_18190 SM00637 AJAP_18190 AJAP_18195 SM00637 AJAP_18195 AJAP_18235 SM00421 helix_turn_helix, Lux Regulon AJAP_18280 SM00421 helix_turn_helix, Lux Regulon AJAP_18290 SM01260 AJAP_18290 AJAP_18365 SM00855 Phosphoglycerate mutase family AJAP_18380 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_18390 SM00710 Parallel beta-helix repeats AJAP_18415 SM00422 helix_turn_helix, mercury resistance AJAP_18425 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_18425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_18490 SM00382 ATPases associated with a variety of cellular activities AJAP_18495 SM00382 ATPases associated with a variety of cellular activities AJAP_18505 SM00862 Transcriptional regulatory protein, C terminal AJAP_18505 SM01043 Bacterial transcriptional activator domain AJAP_18550 SM00829 Enoylreductase AJAP_18560 SM00849 Metallo-beta-lactamase superfamily AJAP_18575 SM00100 Cyclic nucleotide-monophosphate binding domain AJAP_18580 SM00100 Cyclic nucleotide-monophosphate binding domain AJAP_18595 SM00292 breast cancer carboxy-terminal domain AJAP_18595 SM00532 Ligase N family AJAP_18665 SM00382 ATPases associated with a variety of cellular activities AJAP_18695 SM00421 helix_turn_helix, Lux Regulon AJAP_18695 SM00448 cheY-homologous receiver domain AJAP_18700 SM00387 Histidine kinase-like ATPases AJAP_18710 SM00382 ATPases associated with a variety of cellular activities AJAP_18720 SM00116 Domain in cystathionine beta-synthase and other proteins. AJAP_18730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_18730 SM00387 Histidine kinase-like ATPases AJAP_18735 SM00421 helix_turn_helix, Lux Regulon AJAP_18735 SM00448 cheY-homologous receiver domain AJAP_18775 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_18785 SM00342 helix_turn_helix, arabinose operon control protein AJAP_18810 SM01092 CO dehydrogenase flavoprotein C-terminal domain AJAP_18815 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AJAP_18845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_18845 SM00895 AJAP_18845 AJAP_18880 SM00060 Fibronectin type 3 domain AJAP_18880 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain AJAP_18885 SM00060 Fibronectin type 3 domain AJAP_18910 SM00248 ankyrin repeats AJAP_18920 SM00822 AJAP_18920 AJAP_18925 SM00530 Helix-turn-helix XRE-family like proteins AJAP_18965 SM00342 helix_turn_helix, arabinose operon control protein AJAP_19025 SM00487 DEAD-like helicases superfamily AJAP_19025 SM00490 helicase superfamily c-terminal domain AJAP_19150 SM01130 AJAP_19150 AJAP_19175 SM00420 helix_turn_helix, Deoxyribose operon repressor AJAP_19175 SM01134 AJAP_19175 AJAP_19230 SM00320 WD40 repeats AJAP_19245 SM00867 YceI-like domain AJAP_19260 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AJAP_19275 SM00028 Tetratricopeptide repeats AJAP_19275 SM00530 Helix-turn-helix XRE-family like proteins AJAP_19280 SM00823 Phosphopantetheine attachment site AJAP_19285 SM00823 Phosphopantetheine attachment site AJAP_19285 SM00824 Thioesterase AJAP_19350 SM00344 helix_turn_helix ASNC type AJAP_19385 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_19400 SM00421 helix_turn_helix, Lux Regulon AJAP_19400 SM00448 cheY-homologous receiver domain AJAP_19405 SM00387 Histidine kinase-like ATPases AJAP_19460 SM00824 Thioesterase AJAP_19480 SM00823 Phosphopantetheine attachment site AJAP_19530 SM01092 CO dehydrogenase flavoprotein C-terminal domain AJAP_19535 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AJAP_19545 SM01043 Bacterial transcriptional activator domain AJAP_19575 SM00470 ParB-like nuclease domain AJAP_19635 SM01209 AJAP_19635 AJAP_19660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_19680 SM00422 helix_turn_helix, mercury resistance AJAP_19685 SM00244 prohibitin homologues AJAP_19740 SM00382 ATPases associated with a variety of cellular activities AJAP_19835 SM00382 ATPases associated with a variety of cellular activities AJAP_19875 SM00822 AJAP_19875 AJAP_19900 SM00344 helix_turn_helix ASNC type AJAP_19915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_19925 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AJAP_19925 SM00475 5'-3' exonuclease AJAP_19955 SM00487 DEAD-like helicases superfamily AJAP_19955 SM00490 helicase superfamily c-terminal domain AJAP_19955 SM01142 AJAP_19955 AJAP_19965 SM00046 Diacylglycerol kinase catalytic domain (presumed) AJAP_20000 SM00829 Enoylreductase AJAP_20020 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_20035 SM00014 Acid phosphatase homologues AJAP_20035 SM00046 Diacylglycerol kinase catalytic domain (presumed) AJAP_20040 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_20095 SM00382 ATPases associated with a variety of cellular activities AJAP_20150 SM00342 helix_turn_helix, arabinose operon control protein AJAP_20150 SM00478 endonuclease III AJAP_20150 SM01009 AlkA N-terminal domain AJAP_20175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_20180 SM00382 ATPases associated with a variety of cellular activities AJAP_20190 SM00422 helix_turn_helix, mercury resistance AJAP_20195 SM00327 von Willebrand factor (vWF) type A domain AJAP_20260 SM00822 AJAP_20260 AJAP_20270 SM00448 cheY-homologous receiver domain AJAP_20270 SM00862 Transcriptional regulatory protein, C terminal AJAP_20275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_20275 SM00387 Histidine kinase-like ATPases AJAP_20275 SM00388 His Kinase A (phosphoacceptor) domain AJAP_20305 SM00327 von Willebrand factor (vWF) type A domain AJAP_20405 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AJAP_20445 SM01091 Transporter associated domain AJAP_20470 SM00530 Helix-turn-helix XRE-family like proteins AJAP_20485 SM00422 helix_turn_helix, mercury resistance AJAP_20500 SM00422 helix_turn_helix, mercury resistance AJAP_20505 SM00240 Forkhead associated domain AJAP_20550 SM00788 Adenylosuccinate synthetase AJAP_20590 SM00248 ankyrin repeats AJAP_20615 SM00833 Cobalamin synthesis protein cobW C-terminal domain AJAP_20630 SM00833 Cobalamin synthesis protein cobW C-terminal domain AJAP_20645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_20720 SM00859 Semialdehyde dehydrogenase, NAD binding domain AJAP_20725 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_20735 SM00849 Metallo-beta-lactamase superfamily AJAP_20765 SM00382 ATPases associated with a variety of cellular activities AJAP_20780 SM00923 MbtH-like protein AJAP_20785 SM00823 Phosphopantetheine attachment site AJAP_20830 SM00382 ATPases associated with a variety of cellular activities AJAP_20855 SM00060 Fibronectin type 3 domain AJAP_20855 SM00636 AJAP_20855 AJAP_20855 SM00637 AJAP_20855 AJAP_20880 SM00028 Tetratricopeptide repeats AJAP_20905 SM00421 helix_turn_helix, Lux Regulon AJAP_20945 SM00756 AJAP_20945 AJAP_21035 SM01130 AJAP_21035 AJAP_21055 SM00530 Helix-turn-helix XRE-family like proteins AJAP_21065 SM01011 Aminopeptidase P, N-terminal domain AJAP_21110 SM00421 helix_turn_helix, Lux Regulon AJAP_21110 SM00448 cheY-homologous receiver domain AJAP_21125 SM00421 helix_turn_helix, Lux Regulon AJAP_21140 SM00116 Domain in cystathionine beta-synthase and other proteins. AJAP_21140 SM01091 Transporter associated domain AJAP_21155 SM00342 helix_turn_helix, arabinose operon control protein AJAP_21180 SM00382 ATPases associated with a variety of cellular activities AJAP_21185 SM00382 ATPases associated with a variety of cellular activities AJAP_21195 SM00822 AJAP_21195 AJAP_21235 SM00382 ATPases associated with a variety of cellular activities AJAP_21300 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_21300 SM00895 AJAP_21300 AJAP_21370 SM00448 cheY-homologous receiver domain AJAP_21400 SM00823 Phosphopantetheine attachment site AJAP_21405 SM00382 ATPases associated with a variety of cellular activities AJAP_21460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_21460 SM00387 Histidine kinase-like ATPases AJAP_21460 SM00388 His Kinase A (phosphoacceptor) domain AJAP_21465 SM00448 cheY-homologous receiver domain AJAP_21465 SM00862 Transcriptional regulatory protein, C terminal AJAP_21480 SM00342 helix_turn_helix, arabinose operon control protein AJAP_21510 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_21510 SM00895 AJAP_21510 AJAP_21535 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_21565 SM00342 helix_turn_helix, arabinose operon control protein AJAP_21615 SM00354 helix_turn _helix lactose operon repressor AJAP_21635 SM00642 Alpha-amylase domain AJAP_21640 SM00862 Transcriptional regulatory protein, C terminal AJAP_21640 SM01043 Bacterial transcriptional activator domain AJAP_21650 SM00421 helix_turn_helix, Lux Regulon AJAP_21680 SM00020 Trypsin-like serine protease AJAP_21740 SM00812 Alpha-L-fucosidase AJAP_21745 SM00710 Parallel beta-helix repeats AJAP_21750 SM00354 helix_turn _helix lactose operon repressor AJAP_21765 SM00637 AJAP_21765 AJAP_21775 SM00354 helix_turn _helix lactose operon repressor AJAP_21805 SM00507 HNH nucleases AJAP_21835 SM00560 LamG-like jellyroll fold domain AJAP_21870 SM00487 DEAD-like helicases superfamily AJAP_21870 SM00490 helicase superfamily c-terminal domain AJAP_21880 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_21950 SM00342 helix_turn_helix, arabinose operon control protein AJAP_21990 SM00020 Trypsin-like serine protease AJAP_22015 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AJAP_22065 SM00507 HNH nucleases AJAP_22070 SM00028 Tetratricopeptide repeats AJAP_22075 SM00606 Cellulose Binding Domain Type IV AJAP_22075 SM00758 AJAP_22075 AJAP_22100 SM00886 Stress responsive A/B Barrel Domain AJAP_22160 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_22160 SM00895 AJAP_22160 AJAP_22190 SM00822 AJAP_22190 AJAP_22190 SM00823 Phosphopantetheine attachment site AJAP_22190 SM00824 Thioesterase AJAP_22190 SM00825 Beta-ketoacyl synthase AJAP_22190 SM00826 AJAP_22190 AJAP_22190 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_22190 SM01294 AJAP_22190 AJAP_22205 SM00421 helix_turn_helix, Lux Regulon AJAP_22240 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AJAP_22250 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_22285 SM00060 Fibronectin type 3 domain AJAP_22285 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain AJAP_22285 SM00710 Parallel beta-helix repeats AJAP_22295 SM00020 Trypsin-like serine protease AJAP_22300 SM00421 helix_turn_helix, Lux Regulon AJAP_22315 SM00020 Trypsin-like serine protease AJAP_22335 SM00342 helix_turn_helix, arabinose operon control protein AJAP_22355 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_22355 SM00895 AJAP_22355 AJAP_22380 SM00507 HNH nucleases AJAP_22410 SM00344 helix_turn_helix ASNC type AJAP_22525 SM00487 DEAD-like helicases superfamily AJAP_22525 SM00490 helicase superfamily c-terminal domain AJAP_22550 SM00704 CDGSH-type zinc finger. Function unknown. AJAP_22555 SM01236 AJAP_22555 AJAP_22605 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_22610 SM00822 AJAP_22610 AJAP_22630 SM00421 helix_turn_helix, Lux Regulon AJAP_22630 SM00448 cheY-homologous receiver domain AJAP_22635 SM00387 Histidine kinase-like ATPases AJAP_22695 SM00028 Tetratricopeptide repeats AJAP_22695 SM00862 Transcriptional regulatory protein, C terminal AJAP_22695 SM01043 Bacterial transcriptional activator domain AJAP_22700 SM00421 helix_turn_helix, Lux Regulon AJAP_22725 SM00421 helix_turn_helix, Lux Regulon AJAP_22730 SM00636 AJAP_22730 AJAP_22740 SM00530 Helix-turn-helix XRE-family like proteins AJAP_22750 SM00342 helix_turn_helix, arabinose operon control protein AJAP_22770 SM00822 AJAP_22770 AJAP_22840 SM00344 helix_turn_helix ASNC type AJAP_22860 SM00823 Phosphopantetheine attachment site AJAP_22860 SM00824 Thioesterase AJAP_22865 SM00823 Phosphopantetheine attachment site AJAP_22870 SM00822 AJAP_22870 AJAP_22870 SM00823 Phosphopantetheine attachment site AJAP_22870 SM00825 Beta-ketoacyl synthase AJAP_22870 SM00826 AJAP_22870 AJAP_22870 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_22875 SM00823 Phosphopantetheine attachment site AJAP_22880 SM00823 Phosphopantetheine attachment site AJAP_22880 SM00825 Beta-ketoacyl synthase AJAP_22895 SM00020 Trypsin-like serine protease AJAP_22935 SM00387 Histidine kinase-like ATPases AJAP_22940 SM00421 helix_turn_helix, Lux Regulon AJAP_22940 SM00448 cheY-homologous receiver domain AJAP_22945 SM00421 helix_turn_helix, Lux Regulon AJAP_22955 SM00327 von Willebrand factor (vWF) type A domain AJAP_22990 SM00257 Lysin motif AJAP_23050 SM00382 ATPases associated with a variety of cellular activities AJAP_23110 SM00776 AJAP_23110 AJAP_23115 SM00342 helix_turn_helix, arabinose operon control protein AJAP_23165 SM00421 helix_turn_helix, Lux Regulon AJAP_23165 SM00448 cheY-homologous receiver domain AJAP_23185 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AJAP_23240 SM00382 ATPases associated with a variety of cellular activities AJAP_23255 SM00255 Toll - interleukin 1 - resistance AJAP_23290 SM00028 Tetratricopeptide repeats AJAP_23290 SM00382 ATPases associated with a variety of cellular activities AJAP_23290 SM00530 Helix-turn-helix XRE-family like proteins AJAP_23340 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AJAP_23360 SM01236 AJAP_23360 AJAP_23365 SM00704 CDGSH-type zinc finger. Function unknown. AJAP_23430 SM00822 AJAP_23430 AJAP_23440 SM00984 UDP binding domain AJAP_23500 SM01060 AJAP_23500 AJAP_23625 SM01209 AJAP_23625 AJAP_23655 SM00530 Helix-turn-helix XRE-family like proteins AJAP_23665 SM00986 Uracil DNA glycosylase superfamily AJAP_23665 SM00987 UreE urease accessory protein, C-terminal domain AJAP_23745 SM00822 AJAP_23745 AJAP_23780 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_23785 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_23840 SM00116 Domain in cystathionine beta-synthase and other proteins. AJAP_23870 SM00028 Tetratricopeptide repeats AJAP_23870 SM00530 Helix-turn-helix XRE-family like proteins AJAP_23880 SM00267 diguanylate cyclase AJAP_23885 SM00014 Acid phosphatase homologues AJAP_23890 SM00448 cheY-homologous receiver domain AJAP_23890 SM00862 Transcriptional regulatory protein, C terminal AJAP_23895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_23895 SM00387 Histidine kinase-like ATPases AJAP_23895 SM00388 His Kinase A (phosphoacceptor) domain AJAP_23920 SM00422 helix_turn_helix, mercury resistance AJAP_23920 SM00567 E-Z type HEAT repeats AJAP_23940 SM00342 helix_turn_helix, arabinose operon control protein AJAP_23955 SM00267 diguanylate cyclase AJAP_23970 SM00878 Biotin carboxylase C-terminal domain AJAP_24005 SM00825 Beta-ketoacyl synthase AJAP_24005 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_24010 SM00822 AJAP_24010 AJAP_24010 SM00825 Beta-ketoacyl synthase AJAP_24010 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_24035 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_24040 SM00100 Cyclic nucleotide-monophosphate binding domain AJAP_24040 SM00419 helix_turn_helix, cAMP Regulatory protein AJAP_24075 SM00833 Cobalamin synthesis protein cobW C-terminal domain AJAP_24110 SM00824 Thioesterase AJAP_24115 SM00421 helix_turn_helix, Lux Regulon AJAP_24125 SM00867 YceI-like domain AJAP_24135 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_24190 SM00382 ATPases associated with a variety of cellular activities AJAP_24225 SM00271 DnaJ molecular chaperone homology domain AJAP_24230 SM00631 AJAP_24230 AJAP_24245 SM00530 Helix-turn-helix XRE-family like proteins AJAP_24270 SM00822 AJAP_24270 AJAP_24310 SM00857 Resolvase, N terminal domain AJAP_24400 SM00947 Carbonic anhydrase AJAP_24435 SM00267 diguanylate cyclase AJAP_24480 SM00878 Biotin carboxylase C-terminal domain AJAP_24510 SM00422 helix_turn_helix, mercury resistance AJAP_24550 SM00052 Putative diguanylate phosphodiesterase AJAP_24550 SM00091 PAS domain AJAP_24550 SM00267 diguanylate cyclase AJAP_24590 SM00382 ATPases associated with a variety of cellular activities AJAP_24605 SM00382 ATPases associated with a variety of cellular activities AJAP_24620 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AJAP_24630 SM00052 Putative diguanylate phosphodiesterase AJAP_24630 SM00267 diguanylate cyclase AJAP_24650 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_24670 SM00421 helix_turn_helix, Lux Regulon AJAP_24670 SM00448 cheY-homologous receiver domain AJAP_24720 SM00382 ATPases associated with a variety of cellular activities AJAP_24745 SM00382 ATPases associated with a variety of cellular activities AJAP_24775 SM00829 Enoylreductase AJAP_24810 SM00861 Transketolase, pyrimidine binding domain AJAP_24865 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AJAP_24895 SM00342 helix_turn_helix, arabinose operon control protein AJAP_24935 SM00060 Fibronectin type 3 domain AJAP_24935 SM00606 Cellulose Binding Domain Type IV AJAP_24960 SM00240 Forkhead associated domain AJAP_24995 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AJAP_24995 SM00465 GIY-YIG type nucleases (URI domain) AJAP_25000 SM00020 Trypsin-like serine protease AJAP_25040 SM00421 helix_turn_helix, Lux Regulon AJAP_25040 SM00448 cheY-homologous receiver domain AJAP_25090 SM01409 AJAP_25090 AJAP_25095 SM00072 Guanylate kinase homologues. AJAP_25105 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AJAP_25110 SM00851 MGS-like domain AJAP_25110 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AJAP_25115 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AJAP_25140 SM00530 Helix-turn-helix XRE-family like proteins AJAP_25150 SM00841 Elongation factor P, C-terminal AJAP_25150 SM01185 AJAP_25150 AJAP_25235 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_25235 SM00866 AJAP_25235 AJAP_25300 SM00732 Likely ribonuclease with RNase H fold. AJAP_25305 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AJAP_25340 SM00495 Chitin-binding domain type 3 AJAP_25340 SM00636 AJAP_25340 AJAP_25355 SM01007 Class II Aldolase and Adducin N-terminal domain AJAP_25390 SM00382 ATPases associated with a variety of cellular activities AJAP_25405 SM00507 HNH nucleases AJAP_25410 SM00382 ATPases associated with a variety of cellular activities AJAP_25440 SM00305 Hint (Hedgehog/Intein) domain C-terminal region AJAP_25440 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AJAP_25450 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AJAP_25470 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_25510 SM00014 Acid phosphatase homologues AJAP_25595 SM00316 Ribosomal protein S1-like RNA-binding domain AJAP_25630 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_25690 SM00421 helix_turn_helix, Lux Regulon AJAP_25690 SM00448 cheY-homologous receiver domain AJAP_25695 SM00341 Helicase and RNase D C-terminal AJAP_25695 SM00474 3'-5' exonuclease AJAP_25720 SM00796 Allophanate hydrolase subunit 1 AJAP_25720 SM00797 Allophanate hydrolase subunit 2 AJAP_25720 SM00878 Biotin carboxylase C-terminal domain AJAP_25750 SM00481 DNA polymerase alpha chain like domain AJAP_25760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_25760 SM00387 Histidine kinase-like ATPases AJAP_25760 SM00388 His Kinase A (phosphoacceptor) domain AJAP_25765 SM00448 cheY-homologous receiver domain AJAP_25765 SM00862 Transcriptional regulatory protein, C terminal AJAP_25810 SM00861 Transketolase, pyrimidine binding domain AJAP_25835 SM00507 HNH nucleases AJAP_25960 SM00421 helix_turn_helix, Lux Regulon AJAP_25960 SM00448 cheY-homologous receiver domain AJAP_26005 SM00382 ATPases associated with a variety of cellular activities AJAP_26015 SM00487 DEAD-like helicases superfamily AJAP_26110 SM00382 ATPases associated with a variety of cellular activities AJAP_26130 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_26130 SM00866 AJAP_26130 AJAP_26135 SM00020 Trypsin-like serine protease AJAP_26180 SM00460 Transglutaminase/protease-like homologues AJAP_26210 SM00822 AJAP_26210 AJAP_26215 SM00822 AJAP_26215 AJAP_26225 SM00882 Coenzyme A transferase AJAP_26230 SM00882 Coenzyme A transferase AJAP_26250 SM00344 helix_turn_helix ASNC type AJAP_26255 SM01266 AJAP_26255 AJAP_26390 SM00903 Flavin reductase like domain AJAP_26445 SM00904 Riboflavin kinase AJAP_26495 SM00487 DEAD-like helicases superfamily AJAP_26495 SM00490 helicase superfamily c-terminal domain AJAP_26525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_26550 SM00960 Roadblock/LC7 domain AJAP_26555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_26555 SM00387 Histidine kinase-like ATPases AJAP_26645 SM00421 helix_turn_helix, Lux Regulon AJAP_26660 SM00530 Helix-turn-helix XRE-family like proteins AJAP_26680 SM00636 AJAP_26680 AJAP_26685 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_26725 SM00563 Phosphate acyltransferases AJAP_26860 SM00822 AJAP_26860 AJAP_26865 SM00822 AJAP_26865 AJAP_26915 SM00881 CoA binding domain AJAP_26925 SM00450 Rhodanese Homology Domain AJAP_26930 SM00529 Helix-turn-helix diphteria tox regulatory element AJAP_26955 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AJAP_26965 SM00116 Domain in cystathionine beta-synthase and other proteins. AJAP_27095 SM00729 Elongator protein 3, MiaB family, Radical SAM AJAP_27105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_27105 SM00387 Histidine kinase-like ATPases AJAP_27105 SM00388 His Kinase A (phosphoacceptor) domain AJAP_27110 SM00448 cheY-homologous receiver domain AJAP_27110 SM00862 Transcriptional regulatory protein, C terminal AJAP_27115 SM00382 ATPases associated with a variety of cellular activities AJAP_27120 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_27200 SM00382 ATPases associated with a variety of cellular activities AJAP_27215 SM00382 ATPases associated with a variety of cellular activities AJAP_27215 SM00487 DEAD-like helicases superfamily AJAP_27215 SM00490 helicase superfamily c-terminal domain AJAP_27325 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_27325 SM00740 AJAP_27325 AJAP_27455 SM00460 Transglutaminase/protease-like homologues AJAP_27480 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AJAP_27480 SM01232 AJAP_27480 AJAP_27525 SM00530 Helix-turn-helix XRE-family like proteins AJAP_27540 SM00729 Elongator protein 3, MiaB family, Radical SAM AJAP_27580 SM00843 AJAP_27580 AJAP_27585 SM00563 Phosphate acyltransferases AJAP_27625 SM00327 von Willebrand factor (vWF) type A domain AJAP_27635 SM00849 Metallo-beta-lactamase superfamily AJAP_27640 SM01130 AJAP_27640 AJAP_27645 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_27715 SM00316 Ribosomal protein S1-like RNA-binding domain AJAP_27715 SM00322 K homology RNA-binding domain AJAP_27720 SM01387 AJAP_27720 AJAP_27735 SM00904 Riboflavin kinase AJAP_27760 SM00028 Tetratricopeptide repeats AJAP_27760 SM00862 Transcriptional regulatory protein, C terminal AJAP_27760 SM01043 Bacterial transcriptional activator domain AJAP_27810 SM00316 Ribosomal protein S1-like RNA-binding domain AJAP_27840 SM00530 Helix-turn-helix XRE-family like proteins AJAP_27890 SM00474 3'-5' exonuclease AJAP_27890 SM00482 DNA polymerase A domain AJAP_27940 SM00943 Bifunctional DNA primase/polymerase, N-terminal AJAP_28195 SM00857 Resolvase, N terminal domain AJAP_28235 SM00421 helix_turn_helix, Lux Regulon AJAP_28235 SM00448 cheY-homologous receiver domain AJAP_28260 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AJAP_28275 SM00448 cheY-homologous receiver domain AJAP_28275 SM00862 Transcriptional regulatory protein, C terminal AJAP_28280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_28280 SM00387 Histidine kinase-like ATPases AJAP_28280 SM00388 His Kinase A (phosphoacceptor) domain AJAP_28320 SM00507 HNH nucleases AJAP_28325 SM00421 helix_turn_helix, Lux Regulon AJAP_28325 SM00448 cheY-homologous receiver domain AJAP_28345 SM00822 AJAP_28345 AJAP_28435 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_28435 SM01012 AJAP_28435 AJAP_28455 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AJAP_28455 SM00091 PAS domain AJAP_28455 SM00387 Histidine kinase-like ATPases AJAP_28455 SM00388 His Kinase A (phosphoacceptor) domain AJAP_28455 SM00448 cheY-homologous receiver domain AJAP_28465 SM00822 AJAP_28465 AJAP_28470 SM00862 Transcriptional regulatory protein, C terminal AJAP_28470 SM01043 Bacterial transcriptional activator domain AJAP_28480 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_28520 SM00829 Enoylreductase AJAP_28570 SM00822 AJAP_28570 AJAP_28580 SM00382 ATPases associated with a variety of cellular activities AJAP_28580 SM00421 helix_turn_helix, Lux Regulon AJAP_28605 SM00829 Enoylreductase AJAP_28620 SM01230 AJAP_28620 AJAP_28675 SM00448 cheY-homologous receiver domain AJAP_28675 SM00862 Transcriptional regulatory protein, C terminal AJAP_28680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_28680 SM00387 Histidine kinase-like ATPases AJAP_28680 SM00388 His Kinase A (phosphoacceptor) domain AJAP_28690 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AJAP_28690 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AJAP_28730 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AJAP_28760 SM00028 Tetratricopeptide repeats AJAP_28760 SM00382 ATPases associated with a variety of cellular activities AJAP_28760 SM01043 Bacterial transcriptional activator domain AJAP_28770 SM00028 Tetratricopeptide repeats AJAP_28780 SM00342 helix_turn_helix, arabinose operon control protein AJAP_28800 SM00822 AJAP_28800 AJAP_28860 SM00530 Helix-turn-helix XRE-family like proteins AJAP_28870 SM00507 HNH nucleases AJAP_28875 SM00886 Stress responsive A/B Barrel Domain AJAP_28890 SM00421 helix_turn_helix, Lux Regulon AJAP_28900 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_28960 SM00400 zinc finger AJAP_28960 SM00493 AJAP_28960 AJAP_28960 SM00766 DNA primase DnaG DnaB-binding AJAP_28985 SM00093 SERine Proteinase INhibitors AJAP_28990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AJAP_29000 SM00421 helix_turn_helix, Lux Regulon AJAP_29000 SM00448 cheY-homologous receiver domain AJAP_29015 SM00382 ATPases associated with a variety of cellular activities AJAP_29040 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_29120 SM01091 Transporter associated domain AJAP_29145 SM00271 DnaJ molecular chaperone homology domain AJAP_29185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_29185 SM00387 Histidine kinase-like ATPases AJAP_29185 SM00388 His Kinase A (phosphoacceptor) domain AJAP_29190 SM00448 cheY-homologous receiver domain AJAP_29190 SM00862 Transcriptional regulatory protein, C terminal AJAP_29300 SM00729 Elongator protein 3, MiaB family, Radical SAM AJAP_29375 SM00829 Enoylreductase AJAP_29395 SM00495 Chitin-binding domain type 3 AJAP_29405 SM00838 Elongation factor G C-terminus AJAP_29440 SM00849 Metallo-beta-lactamase superfamily AJAP_29445 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AJAP_29460 SM00855 Phosphoglycerate mutase family AJAP_29475 SM00487 DEAD-like helicases superfamily AJAP_29475 SM00490 helicase superfamily c-terminal domain AJAP_29485 SM00836 DALR anticodon binding domain AJAP_29485 SM01016 Arginyl tRNA synthetase N terminal dom AJAP_29500 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AJAP_29520 SM00316 Ribosomal protein S1-like RNA-binding domain AJAP_29540 SM00382 ATPases associated with a variety of cellular activities AJAP_29545 SM00631 AJAP_29545 AJAP_29560 SM00562 AJAP_29560 AJAP_29580 SM00507 HNH nucleases AJAP_29685 SM00382 ATPases associated with a variety of cellular activities AJAP_29685 SM00994 ClpX C4-type zinc finger AJAP_29685 SM01086 C-terminal, D2-small domain, of ClpB protein AJAP_29710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_29710 SM00387 Histidine kinase-like ATPases AJAP_29710 SM00388 His Kinase A (phosphoacceptor) domain AJAP_29735 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AJAP_29755 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_29785 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_29810 SM00331 Sigma factor PP2C-like phosphatases AJAP_29815 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_29815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_29815 SM00387 Histidine kinase-like ATPases AJAP_29815 SM00388 His Kinase A (phosphoacceptor) domain AJAP_29815 SM00448 cheY-homologous receiver domain AJAP_29850 SM00382 ATPases associated with a variety of cellular activities AJAP_29890 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AJAP_29890 SM01232 AJAP_29890 AJAP_29905 SM00849 Metallo-beta-lactamase superfamily AJAP_29935 SM00507 HNH nucleases AJAP_29950 SM00642 Alpha-amylase domain AJAP_29990 SM00382 ATPases associated with a variety of cellular activities AJAP_30005 SM00855 Phosphoglycerate mutase family AJAP_30020 SM00354 helix_turn _helix lactose operon repressor AJAP_30040 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_30090 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_30130 SM00507 HNH nucleases AJAP_30150 SM00421 helix_turn_helix, Lux Regulon AJAP_30150 SM00448 cheY-homologous receiver domain AJAP_30155 SM00342 helix_turn_helix, arabinose operon control protein AJAP_30165 SM00421 helix_turn_helix, Lux Regulon AJAP_30165 SM00448 cheY-homologous receiver domain AJAP_30170 SM00862 Transcriptional regulatory protein, C terminal AJAP_30170 SM01043 Bacterial transcriptional activator domain AJAP_30190 SM00421 helix_turn_helix, Lux Regulon AJAP_30190 SM00448 cheY-homologous receiver domain AJAP_30250 SM00903 Flavin reductase like domain AJAP_30260 SM00822 AJAP_30260 AJAP_30260 SM00825 Beta-ketoacyl synthase AJAP_30260 SM00826 AJAP_30260 AJAP_30260 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_30300 SM00342 helix_turn_helix, arabinose operon control protein AJAP_30315 SM00862 Transcriptional regulatory protein, C terminal AJAP_30315 SM01043 Bacterial transcriptional activator domain AJAP_30405 SM00729 Elongator protein 3, MiaB family, Radical SAM AJAP_30505 SM00382 ATPases associated with a variety of cellular activities AJAP_30515 SM00829 Enoylreductase AJAP_30585 SM00563 Phosphate acyltransferases AJAP_30595 SM00354 helix_turn _helix lactose operon repressor AJAP_30615 SM00448 cheY-homologous receiver domain AJAP_30615 SM00862 Transcriptional regulatory protein, C terminal AJAP_30625 SM00382 ATPases associated with a variety of cellular activities AJAP_30635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_30635 SM00387 Histidine kinase-like ATPases AJAP_30635 SM00388 His Kinase A (phosphoacceptor) domain AJAP_30675 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AJAP_30705 SM00822 AJAP_30705 AJAP_30715 SM00507 HNH nucleases AJAP_30735 SM00855 Phosphoglycerate mutase family AJAP_30765 SM00482 DNA polymerase A domain AJAP_30770 SM00382 ATPases associated with a variety of cellular activities AJAP_30770 SM00487 DEAD-like helicases superfamily AJAP_30770 SM00490 helicase superfamily c-terminal domain AJAP_30770 SM00847 Helicase associated domain (HA2) Add an annotation AJAP_30810 SM00481 DNA polymerase alpha chain like domain AJAP_30820 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_30820 SM00895 AJAP_30820 AJAP_30840 SM00267 diguanylate cyclase AJAP_30930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_30935 SM00421 helix_turn_helix, Lux Regulon AJAP_30935 SM00448 cheY-homologous receiver domain AJAP_30940 SM00382 ATPases associated with a variety of cellular activities AJAP_30945 SM00382 ATPases associated with a variety of cellular activities AJAP_30965 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AJAP_30970 SM00344 helix_turn_helix ASNC type AJAP_31005 SM00420 helix_turn_helix, Deoxyribose operon repressor AJAP_31005 SM01134 AJAP_31005 AJAP_31055 SM00422 helix_turn_helix, mercury resistance AJAP_31080 SM00327 von Willebrand factor (vWF) type A domain AJAP_31080 SM00382 ATPases associated with a variety of cellular activities AJAP_31115 SM00320 WD40 repeats AJAP_31120 SM00421 helix_turn_helix, Lux Regulon AJAP_31140 SM00382 ATPases associated with a variety of cellular activities AJAP_31150 SM00530 Helix-turn-helix XRE-family like proteins AJAP_31165 SM00507 HNH nucleases AJAP_31190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_31190 SM00387 Histidine kinase-like ATPases AJAP_31190 SM00388 His Kinase A (phosphoacceptor) domain AJAP_31195 SM00448 cheY-homologous receiver domain AJAP_31195 SM00862 Transcriptional regulatory protein, C terminal AJAP_31215 SM00382 ATPases associated with a variety of cellular activities AJAP_31275 SM00342 helix_turn_helix, arabinose operon control protein AJAP_31295 SM00636 AJAP_31295 AJAP_31300 SM00316 Ribosomal protein S1-like RNA-binding domain AJAP_31300 SM00732 Likely ribonuclease with RNase H fold. AJAP_31315 SM00487 DEAD-like helicases superfamily AJAP_31315 SM00490 helicase superfamily c-terminal domain AJAP_31330 SM00382 ATPases associated with a variety of cellular activities AJAP_31340 SM00387 Histidine kinase-like ATPases AJAP_31370 SM00028 Tetratricopeptide repeats AJAP_31370 SM00862 Transcriptional regulatory protein, C terminal AJAP_31370 SM01043 Bacterial transcriptional activator domain AJAP_31415 SM00854 Bacterial capsule synthesis protein PGA_cap AJAP_31425 SM00382 ATPases associated with a variety of cellular activities AJAP_31435 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_31435 SM00895 AJAP_31435 AJAP_31460 SM00382 ATPases associated with a variety of cellular activities AJAP_31480 SM00382 ATPases associated with a variety of cellular activities AJAP_31490 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_31535 SM00421 helix_turn_helix, Lux Regulon AJAP_31565 SM00421 helix_turn_helix, Lux Regulon AJAP_31585 SM00507 HNH nucleases AJAP_31630 SM00327 von Willebrand factor (vWF) type A domain AJAP_31645 SM00100 Cyclic nucleotide-monophosphate binding domain AJAP_31645 SM00387 Histidine kinase-like ATPases AJAP_31650 SM00448 cheY-homologous receiver domain AJAP_31660 SM00458 Ricin-type beta-trefoil AJAP_31710 SM01012 AJAP_31710 AJAP_31715 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_31715 SM01012 AJAP_31715 AJAP_31745 SM00382 ATPases associated with a variety of cellular activities AJAP_31750 SM00421 helix_turn_helix, Lux Regulon AJAP_31820 SM00028 Tetratricopeptide repeats AJAP_31820 SM01043 Bacterial transcriptional activator domain AJAP_31845 SM00382 ATPases associated with a variety of cellular activities AJAP_31850 SM00382 ATPases associated with a variety of cellular activities AJAP_31860 SM00507 HNH nucleases AJAP_31930 SM01110 AJAP_31930 AJAP_31965 SM00421 helix_turn_helix, Lux Regulon AJAP_32050 SM00823 Phosphopantetheine attachment site AJAP_32125 SM00923 MbtH-like protein AJAP_32130 SM00823 Phosphopantetheine attachment site AJAP_32130 SM00824 Thioesterase AJAP_32135 SM00823 Phosphopantetheine attachment site AJAP_32140 SM00823 Phosphopantetheine attachment site AJAP_32145 SM00823 Phosphopantetheine attachment site AJAP_32150 SM00382 ATPases associated with a variety of cellular activities AJAP_32205 SM00421 helix_turn_helix, Lux Regulon AJAP_32230 SM00421 helix_turn_helix, Lux Regulon AJAP_32250 SM00342 helix_turn_helix, arabinose operon control protein AJAP_32255 SM00458 Ricin-type beta-trefoil AJAP_32325 SM00862 Transcriptional regulatory protein, C terminal AJAP_32325 SM01043 Bacterial transcriptional activator domain AJAP_32335 SM00382 ATPases associated with a variety of cellular activities AJAP_32350 SM00822 AJAP_32350 AJAP_32350 SM00823 Phosphopantetheine attachment site AJAP_32350 SM00825 Beta-ketoacyl synthase AJAP_32350 SM00826 AJAP_32350 AJAP_32350 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AJAP_32350 SM01294 AJAP_32350 AJAP_32360 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_32370 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain AJAP_32380 SM00100 Cyclic nucleotide-monophosphate binding domain AJAP_32400 SM00382 ATPases associated with a variety of cellular activities AJAP_32410 SM00020 Trypsin-like serine protease AJAP_32425 SM00382 ATPases associated with a variety of cellular activities AJAP_32430 SM00382 ATPases associated with a variety of cellular activities AJAP_32455 SM00495 Chitin-binding domain type 3 AJAP_32460 SM00342 helix_turn_helix, arabinose operon control protein AJAP_32470 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_32475 SM00382 ATPases associated with a variety of cellular activities AJAP_32485 SM00822 AJAP_32485 AJAP_32515 SM00342 helix_turn_helix, arabinose operon control protein AJAP_32555 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AJAP_32575 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AJAP_32575 SM00606 Cellulose Binding Domain Type IV AJAP_32625 SM00382 ATPases associated with a variety of cellular activities AJAP_32650 SM00448 cheY-homologous receiver domain AJAP_32655 SM00387 Histidine kinase-like ATPases AJAP_32690 SM00100 Cyclic nucleotide-monophosphate binding domain AJAP_32690 SM00419 helix_turn_helix, cAMP Regulatory protein AJAP_32705 SM00327 von Willebrand factor (vWF) type A domain AJAP_32710 SM00320 WD40 repeats AJAP_32745 SM00507 HNH nucleases AJAP_32780 SM00382 ATPases associated with a variety of cellular activities AJAP_32790 SM00382 ATPases associated with a variety of cellular activities AJAP_32805 SM00387 Histidine kinase-like ATPases AJAP_32845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_32850 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_32870 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_32870 SM00331 Sigma factor PP2C-like phosphatases AJAP_32915 SM00889 Elongation factor G, domain IV AJAP_33000 SM00052 Putative diguanylate phosphodiesterase AJAP_33000 SM00091 PAS domain AJAP_33000 SM00267 diguanylate cyclase AJAP_33005 SM00825 Beta-ketoacyl synthase AJAP_33065 SM00382 ATPases associated with a variety of cellular activities AJAP_33115 SM00387 Histidine kinase-like ATPases AJAP_33115 SM00433 TopoisomeraseII AJAP_33120 SM00434 DNA Topoisomerase IV AJAP_33130 SM00822 AJAP_33130 AJAP_33180 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_33185 SM00487 DEAD-like helicases superfamily AJAP_33185 SM00490 helicase superfamily c-terminal domain AJAP_33185 SM00847 Helicase associated domain (HA2) Add an annotation AJAP_33195 SM00382 ATPases associated with a variety of cellular activities AJAP_33220 SM00421 helix_turn_helix, Lux Regulon AJAP_33220 SM00448 cheY-homologous receiver domain AJAP_33265 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_33300 SM00421 helix_turn_helix, Lux Regulon AJAP_33300 SM00448 cheY-homologous receiver domain AJAP_33330 SM00382 ATPases associated with a variety of cellular activities AJAP_33335 SM00937 AJAP_33335 AJAP_33375 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AJAP_33430 SM00341 Helicase and RNase D C-terminal AJAP_33450 SM01230 AJAP_33450 AJAP_33475 SM00450 Rhodanese Homology Domain AJAP_33480 SM00344 helix_turn_helix ASNC type AJAP_33505 SM01230 AJAP_33505 AJAP_33530 SM00957 SecA DEAD-like domain AJAP_33530 SM00958 SecA preprotein cross-linking domain AJAP_33575 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AJAP_33580 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AJAP_33600 SM00382 ATPases associated with a variety of cellular activities AJAP_33610 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_33610 SM00895 AJAP_33610 AJAP_33640 SM00955 AJAP_33640 AJAP_33745 SM00421 helix_turn_helix, Lux Regulon AJAP_33760 SM00855 Phosphoglycerate mutase family AJAP_33775 SM00830 Chorismate mutase type II AJAP_33785 SM00226 Low molecular weight phosphatase family AJAP_33805 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_33805 SM00895 AJAP_33805 AJAP_33820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_34005 SM00612 AJAP_34005 AJAP_34010 SM00862 Transcriptional regulatory protein, C terminal AJAP_34035 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AJAP_34045 SM00382 ATPases associated with a variety of cellular activities AJAP_34065 SM00450 Rhodanese Homology Domain AJAP_34135 SM00487 DEAD-like helicases superfamily AJAP_34135 SM00490 helicase superfamily c-terminal domain AJAP_34165 SM00481 DNA polymerase alpha chain like domain AJAP_34240 SM00382 ATPases associated with a variety of cellular activities AJAP_34285 SM00244 prohibitin homologues AJAP_34295 SM00924 MgtE intracellular N domain AJAP_34315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AJAP_34350 SM00014 Acid phosphatase homologues AJAP_34415 SM00382 ATPases associated with a variety of cellular activities AJAP_34420 SM00382 ATPases associated with a variety of cellular activities AJAP_34430 SM00563 Phosphate acyltransferases AJAP_34450 SM00028 Tetratricopeptide repeats AJAP_34450 SM00530 Helix-turn-helix XRE-family like proteins AJAP_34465 SM00636 AJAP_34465 AJAP_34470 SM00530 Helix-turn-helix XRE-family like proteins AJAP_34495 SM00880 AJAP_34495 AJAP_34550 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_34665 SM01001 AIR carboxylase AJAP_34670 SM01209 AJAP_34670 AJAP_34715 SM00421 helix_turn_helix, Lux Regulon AJAP_34715 SM00448 cheY-homologous receiver domain AJAP_34720 SM00421 helix_turn_helix, Lux Regulon AJAP_34735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_34735 SM00387 Histidine kinase-like ATPases AJAP_34740 SM00448 cheY-homologous receiver domain AJAP_34740 SM00862 Transcriptional regulatory protein, C terminal AJAP_34785 SM00855 Phosphoglycerate mutase family AJAP_34800 SM00422 helix_turn_helix, mercury resistance AJAP_34830 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_34840 SM00342 helix_turn_helix, arabinose operon control protein AJAP_34860 SM00421 helix_turn_helix, Lux Regulon AJAP_34860 SM00448 cheY-homologous receiver domain AJAP_34875 SM00530 Helix-turn-helix XRE-family like proteins AJAP_34925 SM00878 Biotin carboxylase C-terminal domain AJAP_35025 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_35030 SM00422 helix_turn_helix, mercury resistance AJAP_35105 SM00422 helix_turn_helix, mercury resistance AJAP_35145 SM01133 AJAP_35145 AJAP_35190 SM00829 Enoylreductase AJAP_35220 SM00487 DEAD-like helicases superfamily AJAP_35220 SM00490 helicase superfamily c-terminal domain AJAP_35245 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AJAP_35265 SM00382 ATPases associated with a variety of cellular activities AJAP_35300 SM00631 AJAP_35300 AJAP_35335 SM00020 Trypsin-like serine protease AJAP_35345 SM00495 Chitin-binding domain type 3 AJAP_35350 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_35380 SM00849 Metallo-beta-lactamase superfamily AJAP_35390 SM01329 AJAP_35390 AJAP_35415 SM00344 helix_turn_helix ASNC type AJAP_35575 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_35615 SM00481 DNA polymerase alpha chain like domain AJAP_35655 SM00357 Cold shock protein domain AJAP_35670 SM00798 AICARFT/IMPCHase bienzyme AJAP_35670 SM00851 MGS-like domain AJAP_35690 SM00881 CoA binding domain AJAP_35725 SM00830 Chorismate mutase type II AJAP_35745 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_35780 SM00421 helix_turn_helix, Lux Regulon AJAP_35780 SM00448 cheY-homologous receiver domain AJAP_35785 SM00387 Histidine kinase-like ATPases AJAP_35825 SM00382 ATPases associated with a variety of cellular activities AJAP_35860 SM01240 AJAP_35860 AJAP_35870 SM00116 Domain in cystathionine beta-synthase and other proteins. AJAP_35870 SM01240 AJAP_35870 AJAP_35890 SM00421 helix_turn_helix, Lux Regulon AJAP_35890 SM00448 cheY-homologous receiver domain AJAP_35900 SM00422 helix_turn_helix, mercury resistance AJAP_35915 SM00883 Chaperonin 10 Kd subunit AJAP_35925 SM00644 AJAP_35925 AJAP_35990 SM01005 Alanine racemase, C-terminal domain AJAP_35995 SM00382 ATPases associated with a variety of cellular activities AJAP_36005 SM00420 helix_turn_helix, Deoxyribose operon repressor AJAP_36005 SM01134 AJAP_36005 AJAP_36115 SM00382 ATPases associated with a variety of cellular activities AJAP_36170 SM00662 RNA polymerases D AJAP_36175 SM00363 S4 RNA-binding domain AJAP_36175 SM01390 AJAP_36175 AJAP_36275 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AJAP_36280 SM01374 AJAP_36280 AJAP_36300 SM00322 K homology RNA-binding domain AJAP_36315 SM01382 AJAP_36315 AJAP_36315 SM01383 AJAP_36315 AJAP_36335 SM01403 AJAP_36335 AJAP_36345 SM00838 Elongation factor G C-terminus AJAP_36345 SM00889 Elongation factor G, domain IV AJAP_36425 SM00663 RNA polymerase I subunit A N-terminus AJAP_36490 SM00382 ATPases associated with a variety of cellular activities AJAP_36520 SM00649 Ribosomal protein L11/L12 AJAP_36525 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AJAP_36525 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AJAP_36585 SM00052 Putative diguanylate phosphodiesterase AJAP_36585 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_36585 SM00267 diguanylate cyclase AJAP_36605 SM00382 ATPases associated with a variety of cellular activities AJAP_36605 SM00464 Found in ATP-dependent protease La (LON) AJAP_36615 SM00530 Helix-turn-helix XRE-family like proteins AJAP_36635 SM00421 helix_turn_helix, Lux Regulon AJAP_36635 SM00448 cheY-homologous receiver domain AJAP_36640 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_36805 SM00710 Parallel beta-helix repeats AJAP_36810 SM00710 Parallel beta-helix repeats AJAP_36835 SM00710 Parallel beta-helix repeats AJAP_36870 SM00984 UDP binding domain AJAP_36895 SM00344 helix_turn_helix ASNC type AJAP_36945 SM00382 ATPases associated with a variety of cellular activities AJAP_36975 SM00530 Helix-turn-helix XRE-family like proteins AJAP_37020 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AJAP_37020 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AJAP_37025 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AJAP_37065 SM01043 Bacterial transcriptional activator domain AJAP_37135 SM00344 helix_turn_helix ASNC type AJAP_37175 SM00855 Phosphoglycerate mutase family AJAP_37205 SM01004 Delta-aminolevulinic acid dehydratase AJAP_37230 SM00881 CoA binding domain AJAP_37265 SM00563 Phosphate acyltransferases AJAP_37310 SM00448 cheY-homologous receiver domain AJAP_37310 SM00862 Transcriptional regulatory protein, C terminal AJAP_37315 SM00387 Histidine kinase-like ATPases AJAP_37315 SM00388 His Kinase A (phosphoacceptor) domain AJAP_37330 SM00855 Phosphoglycerate mutase family AJAP_37390 SM00829 Enoylreductase AJAP_37435 SM00530 Helix-turn-helix XRE-family like proteins AJAP_37485 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_37580 SM00530 Helix-turn-helix XRE-family like proteins AJAP_37585 SM00849 Metallo-beta-lactamase superfamily AJAP_37590 SM01350 AJAP_37590 AJAP_37620 SM00052 Putative diguanylate phosphodiesterase AJAP_37620 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AJAP_37620 SM00091 PAS domain AJAP_37620 SM00267 diguanylate cyclase AJAP_37635 SM00020 Trypsin-like serine protease AJAP_37670 SM00357 Cold shock protein domain AJAP_37705 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_37740 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_37765 SM00421 helix_turn_helix, Lux Regulon AJAP_37765 SM00448 cheY-homologous receiver domain AJAP_37770 SM00357 Cold shock protein domain AJAP_37795 SM00382 ATPases associated with a variety of cellular activities AJAP_37800 SM00382 ATPases associated with a variety of cellular activities AJAP_37810 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_37810 SM01260 AJAP_37810 AJAP_37835 SM00422 helix_turn_helix, mercury resistance AJAP_37855 SM00421 helix_turn_helix, Lux Regulon AJAP_37855 SM00448 cheY-homologous receiver domain AJAP_37865 SM00357 Cold shock protein domain AJAP_37875 SM00422 helix_turn_helix, mercury resistance AJAP_37925 SM00421 helix_turn_helix, Lux Regulon AJAP_37955 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_37980 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_37980 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AJAP_37990 SM00382 ATPases associated with a variety of cellular activities AJAP_38000 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_38025 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_38050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_38070 SM00226 Low molecular weight phosphatase family AJAP_38075 SM00226 Low molecular weight phosphatase family AJAP_38080 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_38165 SM00382 ATPases associated with a variety of cellular activities AJAP_38375 SM00704 CDGSH-type zinc finger. Function unknown. AJAP_38395 SM00422 helix_turn_helix, mercury resistance AJAP_38600 SM00862 Transcriptional regulatory protein, C terminal AJAP_38600 SM01043 Bacterial transcriptional activator domain AJAP_38650 SM00382 ATPases associated with a variety of cellular activities AJAP_38660 SM00858 AJAP_38660 AJAP_38680 SM00028 Tetratricopeptide repeats AJAP_38680 SM00530 Helix-turn-helix XRE-family like proteins AJAP_38715 SM00881 CoA binding domain AJAP_38720 SM00346 helix_turn_helix isocitrate lyase regulation AJAP_38760 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_38760 SM01012 AJAP_38760 AJAP_38765 SM01012 AJAP_38765 AJAP_38795 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_38870 SM00382 ATPases associated with a variety of cellular activities AJAP_38880 SM01058 CarD-like/TRCF domain AJAP_38910 SM00840 AJAP_38910 AJAP_38915 SM00967 RNA 2'-O ribose methyltransferase substrate binding AJAP_38950 SM00460 Transglutaminase/protease-like homologues AJAP_38975 SM01007 Class II Aldolase and Adducin N-terminal domain AJAP_38995 SM01120 AJAP_38995 AJAP_39005 SM00855 Phosphoglycerate mutase family AJAP_39010 SM00420 helix_turn_helix, Deoxyribose operon repressor AJAP_39010 SM01134 AJAP_39010 AJAP_39055 SM00382 ATPases associated with a variety of cellular activities AJAP_39065 SM00354 helix_turn _helix lactose operon repressor AJAP_39070 SM00947 Carbonic anhydrase AJAP_39075 SM00478 endonuclease III AJAP_39075 SM00525 AJAP_39075 AJAP_39080 SM00644 AJAP_39080 AJAP_39080 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AJAP_39115 SM00450 Rhodanese Homology Domain AJAP_39160 SM00382 ATPases associated with a variety of cellular activities AJAP_39170 SM00862 Transcriptional regulatory protein, C terminal AJAP_39170 SM01043 Bacterial transcriptional activator domain AJAP_39190 SM00530 Helix-turn-helix XRE-family like proteins AJAP_39200 SM00382 ATPases associated with a variety of cellular activities AJAP_39200 SM01086 C-terminal, D2-small domain, of ClpB protein AJAP_39215 SM00342 helix_turn_helix, arabinose operon control protein AJAP_39275 SM00422 helix_turn_helix, mercury resistance AJAP_39285 SM00905 Dihydroneopterin aldolase AJAP_39295 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AJAP_39300 SM00382 ATPases associated with a variety of cellular activities AJAP_39360 SM00649 Ribosomal protein L11/L12 AJAP_39370 SM00631 AJAP_39370 AJAP_39430 SM00382 ATPases associated with a variety of cellular activities AJAP_39475 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AJAP_39475 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AJAP_39475 SM00493 AJAP_39475 AJAP_39510 SM00487 DEAD-like helicases superfamily AJAP_39510 SM00490 helicase superfamily c-terminal domain AJAP_39515 SM00943 Bifunctional DNA primase/polymerase, N-terminal AJAP_39595 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_39615 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AJAP_39725 SM00478 endonuclease III AJAP_39725 SM00525 AJAP_39725 AJAP_39735 SM00100 Cyclic nucleotide-monophosphate binding domain AJAP_39735 SM00419 helix_turn_helix, cAMP Regulatory protein AJAP_39745 SM00480 DNA polymerase III beta subunit AJAP_39755 SM00849 Metallo-beta-lactamase superfamily AJAP_39875 SM01060 AJAP_39875 AJAP_39905 SM00859 Semialdehyde dehydrogenase, NAD binding domain AJAP_39925 SM00530 Helix-turn-helix XRE-family like proteins AJAP_39935 SM01012 AJAP_39935 AJAP_39940 SM01012 AJAP_39940 AJAP_39945 SM00091 PAS domain AJAP_39945 SM00138 Methyltransferase, chemotaxis proteins AJAP_39960 SM00917 LeuA allosteric (dimerisation) domain AJAP_39985 SM00650 Ribosomal RNA adenine dimethylases AJAP_39990 SM00822 AJAP_39990 AJAP_40005 SM00382 ATPases associated with a variety of cellular activities AJAP_40010 SM00382 ATPases associated with a variety of cellular activities AJAP_40065 SM00493 AJAP_40065 AJAP_40075 SM00646 AJAP_40075 AJAP_40090 SM00382 ATPases associated with a variety of cellular activities AJAP_40105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AJAP_40105 SM00387 Histidine kinase-like ATPases AJAP_40105 SM00388 His Kinase A (phosphoacceptor) domain AJAP_40110 SM00448 cheY-homologous receiver domain AJAP_40110 SM00862 Transcriptional regulatory protein, C terminal AJAP_40130 SM00421 helix_turn_helix, Lux Regulon AJAP_40130 SM00448 cheY-homologous receiver domain AJAP_40190 SM00331 Sigma factor PP2C-like phosphatases AJAP_40190 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AJAP_40200 SM00220 Serine/Threonine protein kinases, catalytic domain AJAP_40210 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AJAP_40215 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AJAP_40305 SM01130 AJAP_40305 AJAP_40330 SM00344 helix_turn_helix ASNC type AJAP_40410 SM00267 diguanylate cyclase AJAP_40425 SM00382 ATPases associated with a variety of cellular activities AJAP_40450 SM00862 Transcriptional regulatory protein, C terminal AJAP_40470 SM00450 Rhodanese Homology Domain AJAP_40490 SM00796 Allophanate hydrolase subunit 1 AJAP_40495 SM00797 Allophanate hydrolase subunit 2 AJAP_40605 SM00641 Glycosyl hydrolases family 25 AJAP_40610 SM00641 Glycosyl hydrolases family 25 AJAP_40640 SM00382 ATPases associated with a variety of cellular activities AJAP_40645 SM01211 AJAP_40645 AJAP_40675 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AJAP_40675 SM00419 helix_turn_helix, cAMP Regulatory protein AJAP_40680 SM00849 Metallo-beta-lactamase superfamily AJAP_40715 SM00382 ATPases associated with a variety of cellular activities AJAP_40725 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_40725 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AJAP_40730 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_40735 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_40740 SM00998 Adenylosuccinate lyase C-terminus AJAP_40785 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_40825 SM01209 AJAP_40825 AJAP_40825 SM01210 AJAP_40825 AJAP_40855 SM00788 Adenylosuccinate synthetase AJAP_40885 SM00382 ATPases associated with a variety of cellular activities AJAP_40915 SM00267 diguanylate cyclase AJAP_40960 SM00822 AJAP_40960 AJAP_41030 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_41065 SM00382 ATPases associated with a variety of cellular activities AJAP_41080 SM00354 helix_turn _helix lactose operon repressor AJAP_41100 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AJAP_41125 SM00382 ATPases associated with a variety of cellular activities AJAP_41135 SM00822 AJAP_41135 AJAP_41150 SM00382 ATPases associated with a variety of cellular activities AJAP_41150 SM01086 C-terminal, D2-small domain, of ClpB protein AJAP_41160 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_41175 SM00495 Chitin-binding domain type 3 AJAP_41185 SM00422 helix_turn_helix, mercury resistance AJAP_41190 SM00271 DnaJ molecular chaperone homology domain AJAP_41260 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_41375 SM00986 Uracil DNA glycosylase superfamily AJAP_41375 SM00987 UreE urease accessory protein, C-terminal domain AJAP_41380 SM00421 helix_turn_helix, Lux Regulon AJAP_41400 SM00364 Leucine-rich repeats, bacterial type AJAP_41400 SM00369 Leucine-rich repeats, typical (most populated) subfamily AJAP_41410 SM00883 Chaperonin 10 Kd subunit AJAP_41455 SM00382 ATPases associated with a variety of cellular activities AJAP_41465 SM00062 Bacterial periplasmic substrate-binding proteins AJAP_41485 SM00460 Transglutaminase/protease-like homologues AJAP_41520 SM00861 Transketolase, pyrimidine binding domain AJAP_41535 SM00382 ATPases associated with a variety of cellular activities AJAP_41575 SM00822 AJAP_41575 AJAP_41585 SM00382 ATPases associated with a variety of cellular activities AJAP_41610 SM00422 helix_turn_helix, mercury resistance AJAP_41630 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_41670 SM00530 Helix-turn-helix XRE-family like proteins AJAP_41685 SM00382 ATPases associated with a variety of cellular activities AJAP_41735 SM00421 helix_turn_helix, Lux Regulon AJAP_41735 SM00448 cheY-homologous receiver domain AJAP_41755 SM00382 ATPases associated with a variety of cellular activities AJAP_41765 SM00382 ATPases associated with a variety of cellular activities AJAP_41795 SM00382 ATPases associated with a variety of cellular activities AJAP_41805 SM00421 helix_turn_helix, Lux Regulon AJAP_41805 SM00448 cheY-homologous receiver domain AJAP_41815 SM00822 AJAP_41815 AJAP_41850 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_41915 SM00518 AP endonuclease family 2 AJAP_41975 SM00382 ATPases associated with a variety of cellular activities AJAP_42020 SM00347 helix_turn_helix multiple antibiotic resistance protein AJAP_42065 SM00421 helix_turn_helix, Lux Regulon AJAP_42065 SM00448 cheY-homologous receiver domain AJAP_42125 SM00822 AJAP_42125 AJAP_42165 SM00954 Region found in RelA / SpoT proteins AJAP_42215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AJAP_42260 SM00646 AJAP_42260 AJAP_42290 SM00470 ParB-like nuclease domain AJAP_42305 SM00393 Putative single-stranded nucleic acids-binding domain AJAP_42315 SM01234 AJAP_42315 AJAP_42500 SM00470 ParB-like nuclease domain AJAP_42510 SM00470 ParB-like nuclease domain AJAP_42955 SM00530 Helix-turn-helix XRE-family like proteins AJAP_42990 SM00345 helix_turn_helix gluconate operon transcriptional repressor AJAP_42990 SM00866 AJAP_42990