locus-tag class description RAM_00005 IPR010921 Trp repressor/replication initiator RAM_00005 IPR003593 AAA+ ATPase domain RAM_00005 IPR001957 Chromosomal replication control, initiator DnaA RAM_00005 IPR020591 Chromosomal replication control, initiator DnaA-like RAM_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RAM_00005 IPR013317 Chromosomal replication initiator protein DnaA RAM_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal RAM_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal RAM_00010 IPR022637 DNA polymerase III, beta sliding clamp, central RAM_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal RAM_00010 IPR001001 DNA polymerase III, beta sliding clamp RAM_00015 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_00015 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type RAM_00015 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_00015 IPR006114 6-phosphogluconate dehydrogenase, C-terminal RAM_00015 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RAM_00015 IPR036291 NAD(P)-binding domain superfamily RAM_00015 IPR006183 6-phosphogluconate dehydrogenase RAM_00020 IPR001238 DNA-binding, RecF RAM_00020 IPR018078 DNA-binding, RecF, conserved site RAM_00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_00020 IPR003395 RecF/RecN/SMC, N-terminal RAM_00020 IPR042174 DNA-binding RecF, domain 2 RAM_00025 IPR023007 Uncharacterised protein family UPF0232, actinobacteria RAM_00025 IPR007922 Protein of unknown function DUF721/UPF0232 RAM_00030 IPR002288 DNA gyrase B subunit, C-terminal RAM_00030 IPR006171 TOPRIM domain RAM_00030 IPR018522 DNA topoisomerase, type IIA, conserved site RAM_00030 IPR003594 Histidine kinase/HSP90-like ATPase RAM_00030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_00030 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_00030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_00030 IPR001241 DNA topoisomerase, type IIA RAM_00030 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RAM_00030 IPR011557 DNA gyrase, subunit B RAM_00030 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RAM_00030 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal RAM_00035 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RAM_00035 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat RAM_00035 IPR005743 DNA gyrase, subunit A RAM_00035 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily RAM_00035 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RAM_00035 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RAM_00035 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RAM_00040 IPR021949 Domain of unknown function DUF3566. transmembrane RAM_00050 IPR011010 DNA breaking-rejoining enzyme, catalytic core RAM_00050 IPR013762 Integrase-like, catalytic domain superfamily RAM_00050 IPR002104 Integrase, catalytic domain RAM_00050 IPR010998 Integrase/recombinase, N-terminal RAM_00125 IPR003439 ABC transporter-like RAM_00125 IPR017871 ABC transporter, conserved site RAM_00125 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_00125 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_00125 IPR003593 AAA+ ATPase domain RAM_00125 IPR025302 Domain of unknown function DUF4162 RAM_00130 IPR013525 ABC-2 type transporter RAM_00130 IPR000412 ABC-2 transporter RAM_00135 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_00135 IPR000792 Transcription regulator LuxR, C-terminal RAM_00135 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_00135 IPR016032 Signal transduction response regulator, C-terminal effector RAM_00135 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_00140 IPR017972 Cytochrome P450, conserved site RAM_00140 IPR036396 Cytochrome P450 superfamily RAM_00140 IPR002397 Cytochrome P450, B-class RAM_00140 IPR001128 Cytochrome P450 RAM_00145 IPR029058 Alpha/Beta hydrolase fold RAM_00145 IPR000073 Alpha/beta hydrolase fold-1 RAM_00150 IPR000659 Pyridoxamine 5'-phosphate oxidase RAM_00150 IPR012349 FMN-binding split barrel RAM_00150 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal RAM_00150 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative RAM_00150 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site RAM_00175 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site RAM_00175 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RAM_00175 IPR029000 Cyclophilin-like domain superfamily RAM_00175 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase RAM_00180 IPR019734 Tetratricopeptide repeat RAM_00180 IPR022764 Peptidase S54, rhomboid domain RAM_00180 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_00180 IPR013026 Tetratricopeptide repeat-containing domain RAM_00180 IPR035952 Rhomboid-like superfamily RAM_00190 IPR009619 Cell division protein CrgA RAM_00195 IPR005754 Sortase family RAM_00195 IPR042003 Sortase E RAM_00195 IPR023365 Sortase domain superfamily RAM_00215 IPR017871 ABC transporter, conserved site RAM_00215 IPR015851 ABC transporter, NodI RAM_00215 IPR003439 ABC transporter-like RAM_00215 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_00215 IPR005978 Nodulation ABC transporter, NodI RAM_00215 IPR003593 AAA+ ATPase domain RAM_00225 IPR001789 Signal transduction response regulator, receiver domain RAM_00225 IPR016032 Signal transduction response regulator, C-terminal effector RAM_00225 IPR011006 CheY-like superfamily RAM_00225 IPR000792 Transcription regulator LuxR, C-terminal RAM_00230 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_00230 IPR023753 FAD/NAD(P)-binding domain RAM_00230 IPR021163 Ferredoxin-NADP+ reductase, adrenodoxin-type RAM_00235 IPR029062 Class I glutamine amidotransferase-like RAM_00235 IPR017926 Glutamine amidotransferase RAM_00235 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain RAM_00240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_00240 IPR003439 ABC transporter-like RAM_00240 IPR003593 AAA+ ATPase domain RAM_00240 IPR017871 ABC transporter, conserved site RAM_00255 IPR008271 Serine/threonine-protein kinase, active site RAM_00255 IPR017441 Protein kinase, ATP binding site RAM_00255 IPR000719 Protein kinase domain RAM_00255 IPR005543 PASTA domain RAM_00255 IPR011009 Protein kinase-like domain superfamily RAM_00260 IPR008271 Serine/threonine-protein kinase, active site RAM_00260 IPR000719 Protein kinase domain RAM_00260 IPR011009 Protein kinase-like domain superfamily RAM_00265 IPR012338 Beta-lactamase/transpeptidase-like RAM_00265 IPR001460 Penicillin-binding protein, transpeptidase RAM_00270 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA RAM_00270 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RAM_00275 IPR001932 PPM-type phosphatase domain RAM_00275 IPR015655 Protein phosphatase 2C family RAM_00275 IPR036457 PPM-type phosphatase domain superfamily RAM_00280 IPR000253 Forkhead-associated (FHA) domain RAM_00280 IPR008984 SMAD/FHA domain superfamily RAM_00280 IPR032030 YscD, cytoplasmic domain RAM_00285 IPR000253 Forkhead-associated (FHA) domain RAM_00285 IPR022128 Domain of unknown function DUF3662 RAM_00285 IPR042287 FhaA, N-terminal RAM_00285 IPR008984 SMAD/FHA domain superfamily RAM_00300 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RAM_00310 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RAM_00310 IPR015424 Pyridoxal phosphate-dependent transferase RAM_00310 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_00310 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_00330 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_00330 IPR011711 GntR, C-terminal RAM_00330 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_00330 IPR023730 HTH-type transcriptional repressor NanR RAM_00330 IPR036390 Winged helix DNA-binding domain superfamily RAM_00330 IPR000524 Transcription regulator HTH, GntR RAM_00335 IPR000914 Solute-binding protein family 5 domain RAM_00335 IPR030678 Peptide/nickel binding protein, MppA-type RAM_00335 IPR039424 Solute-binding protein family 5 RAM_00335 IPR011980 Nickel ABC transporter, substrate-binding protein NikA RAM_00335 IPR023765 Solute-binding protein family 5, conserved site RAM_00340 IPR035906 MetI-like superfamily RAM_00340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_00350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_00350 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_00350 IPR017871 ABC transporter, conserved site RAM_00350 IPR003593 AAA+ ATPase domain RAM_00350 IPR003439 ABC transporter-like RAM_00355 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_00355 IPR003593 AAA+ ATPase domain RAM_00355 IPR003439 ABC transporter-like RAM_00355 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_00355 IPR017871 ABC transporter, conserved site RAM_00360 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_00360 IPR015590 Aldehyde dehydrogenase domain RAM_00360 IPR016161 Aldehyde/histidinol dehydrogenase RAM_00360 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_00360 IPR016160 Aldehyde dehydrogenase, cysteine active site RAM_00360 IPR017656 Putative phosphonoacetaldehyde dehydrogenase RAM_00360 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_00365 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_00365 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_00365 IPR036291 NAD(P)-binding domain superfamily RAM_00365 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_00370 IPR023631 Amidase signature domain RAM_00370 IPR036928 Amidase signature (AS) superfamily RAM_00370 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RAM_00370 IPR000120 Amidase RAM_00370 IPR020556 Amidase, conserved site RAM_00390 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RAM_00390 IPR011206 Citrate lyase beta subunit-like RAM_00390 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RAM_00390 IPR040442 Pyruvate kinase-like domain superfamily RAM_00395 IPR040442 Pyruvate kinase-like domain superfamily RAM_00395 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RAM_00395 IPR011206 Citrate lyase beta subunit-like RAM_00395 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RAM_00405 IPR036291 NAD(P)-binding domain superfamily RAM_00405 IPR016040 NAD(P)-binding domain RAM_00410 IPR005946 Ribose-phosphate pyrophosphokinase RAM_00410 IPR029057 Phosphoribosyltransferase-like RAM_00410 IPR000836 Phosphoribosyltransferase domain RAM_00410 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain RAM_00415 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase RAM_00415 IPR036318 FAD-binding, type PCMH-like superfamily RAM_00415 IPR016166 FAD-binding domain, PCMH-type RAM_00415 IPR007173 D-arabinono-1,4-lactone oxidase RAM_00415 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_00415 IPR006094 FAD linked oxidase, N-terminal RAM_00415 IPR006093 Oxygen oxidoreductase covalent FAD-binding site RAM_00415 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RAM_00415 IPR016167 FAD-binding, type PCMH, subdomain 1 RAM_00425 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_00425 IPR009057 Homeobox-like domain superfamily RAM_00425 IPR001647 DNA-binding HTH domain, TetR-type RAM_00425 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_00425 IPR039538 BetI-type transcriptional repressor, C-terminal RAM_00425 IPR017757 Transcriptional repressor BetI RAM_00430 IPR001360 Glycoside hydrolase family 1 RAM_00430 IPR017853 Glycoside hydrolase superfamily RAM_00430 IPR018120 Glycoside hydrolase family 1, active site RAM_00430 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase RAM_00430 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RAM_00435 IPR036259 MFS transporter superfamily RAM_00435 IPR018043 Sodium:galactoside symporter, conserved site RAM_00435 IPR039672 Lactose permease-like RAM_00470 IPR008457 Copper resistance protein D RAM_00470 IPR007348 CopC domain RAM_00470 IPR014756 Immunoglobulin E-set RAM_00470 IPR032693 YtkA-like domain RAM_00470 IPR032694 Copper transport protein C/D RAM_00485 IPR035906 MetI-like superfamily RAM_00485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_00490 IPR003439 ABC transporter-like RAM_00490 IPR003593 AAA+ ATPase domain RAM_00490 IPR017871 ABC transporter, conserved site RAM_00490 IPR000644 CBS domain RAM_00490 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_00490 IPR005892 Glycine betaine transport ATP-binding subunit RAM_00495 IPR035906 MetI-like superfamily RAM_00495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_00500 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain RAM_00520 IPR023576 UbiE/COQ5 methyltransferase, conserved site RAM_00520 IPR004033 UbiE/COQ5 methyltransferase RAM_00520 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_00525 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_00525 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_00525 IPR036291 NAD(P)-binding domain superfamily RAM_00530 IPR036291 NAD(P)-binding domain superfamily RAM_00530 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RAM_00530 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_00530 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily RAM_00530 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RAM_00530 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RAM_00530 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type RAM_00530 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RAM_00535 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_00535 IPR000101 Gamma-glutamyltranspeptidase RAM_00545 IPR032806 H repeat-associated protein, N-terminal RAM_00545 IPR002559 Transposase, IS4-like RAM_00560 IPR036259 MFS transporter superfamily RAM_00560 IPR020846 Major facilitator superfamily domain RAM_00560 IPR011701 Major facilitator superfamily RAM_00570 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_00570 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_00575 IPR016032 Signal transduction response regulator, C-terminal effector RAM_00575 IPR011006 CheY-like superfamily RAM_00575 IPR001789 Signal transduction response regulator, receiver domain RAM_00575 IPR000792 Transcription regulator LuxR, C-terminal RAM_00585 IPR006368 GDP-mannose 4,6-dehydratase RAM_00585 IPR016040 NAD(P)-binding domain RAM_00585 IPR036291 NAD(P)-binding domain superfamily RAM_00610 IPR001296 Glycosyl transferase, family 1 RAM_00660 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type RAM_00660 IPR010979 Ribosomal protein S13-like, H2TH RAM_00660 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RAM_00660 IPR010663 Zinc finger, FPG/IleRS-type RAM_00665 IPR003018 GAF domain RAM_00665 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_00665 IPR010559 Signal transduction histidine kinase, internal region RAM_00665 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region RAM_00670 IPR029045 ClpP/crotonase-like domain superfamily RAM_00670 IPR023171 Na/H antiporter domain superfamily RAM_00670 IPR002142 Peptidase S49 RAM_00670 IPR004670 Na+/H+ antiporter NhaA RAM_00680 IPR001789 Signal transduction response regulator, receiver domain RAM_00680 IPR011006 CheY-like superfamily RAM_00680 IPR007492 LytTR DNA-binding domain RAM_00690 IPR001734 Sodium/solute symporter RAM_00690 IPR038377 Sodium/glucose symporter superfamily RAM_00695 IPR001763 Rhodanese-like domain RAM_00695 IPR036873 Rhodanese-like domain superfamily RAM_00695 IPR001455 TusA-like domain RAM_00695 IPR036868 TusA-like domain superfamily RAM_00715 IPR020846 Major facilitator superfamily domain RAM_00715 IPR023721 Multidrug resistance protein MdtD RAM_00715 IPR036259 MFS transporter superfamily RAM_00715 IPR011701 Major facilitator superfamily RAM_00720 IPR017811 Mycothiol S-conjugate amidase Mca RAM_00720 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RAM_00720 IPR024078 Putative deacetylase LmbE-like domain superfamily RAM_00725 IPR002397 Cytochrome P450, B-class RAM_00725 IPR001128 Cytochrome P450 RAM_00725 IPR017972 Cytochrome P450, conserved site RAM_00725 IPR036396 Cytochrome P450 superfamily RAM_00740 IPR012845 RNA polymerase sigma factor, FliA/WhiG RAM_00740 IPR007630 RNA polymerase sigma-70 region 4 RAM_00740 IPR007627 RNA polymerase sigma-70 region 2 RAM_00740 IPR014284 RNA polymerase sigma-70 like domain RAM_00740 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_00740 IPR000943 RNA polymerase sigma-70 RAM_00740 IPR007624 RNA polymerase sigma-70 region 3 RAM_00740 IPR013325 RNA polymerase sigma factor, region 2 RAM_00750 IPR008331 Ferritin/DPS protein domain RAM_00750 IPR041719 Ferritin, prokaryotic-type RAM_00750 IPR009078 Ferritin-like superfamily RAM_00750 IPR009040 Ferritin-like diiron domain RAM_00750 IPR012347 Ferritin-like RAM_00750 IPR001519 Ferritin RAM_00755 IPR003876 Arginine deiminase RAM_00825 IPR002585 Cytochrome ubiquinol oxidase subunit 1 RAM_00830 IPR003317 Cytochrome ubiquinol oxidase subunit 2 RAM_00835 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD RAM_00835 IPR017871 ABC transporter, conserved site RAM_00835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_00835 IPR003439 ABC transporter-like RAM_00835 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_00835 IPR011527 ABC transporter type 1, transmembrane domain RAM_00835 IPR003593 AAA+ ATPase domain RAM_00835 IPR039421 Type I protein exporter RAM_00840 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_00840 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_00840 IPR003594 Histidine kinase/HSP90-like ATPase RAM_00840 IPR029016 GAF-like domain superfamily RAM_00840 IPR003018 GAF domain RAM_00845 IPR011006 CheY-like superfamily RAM_00845 IPR016032 Signal transduction response regulator, C-terminal effector RAM_00845 IPR001789 Signal transduction response regulator, receiver domain RAM_00845 IPR000792 Transcription regulator LuxR, C-terminal RAM_00890 IPR007527 Zinc finger, SWIM-type RAM_00910 IPR006083 Phosphoribulokinase/uridine kinase RAM_00910 IPR004566 Pantothenate kinase RAM_00910 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_00915 IPR002589 Macro domain RAM_00920 IPR018528 Prephenate dehydratase, conserved site RAM_00920 IPR001086 Prephenate dehydratase RAM_00920 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RAM_00920 IPR002912 ACT domain RAM_00925 IPR013078 Histidine phosphatase superfamily, clade-1 RAM_00925 IPR029033 Histidine phosphatase superfamily RAM_00960 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain RAM_00960 IPR016185 Pre-ATP-grasp domain superfamily RAM_00970 IPR023489 Haloalkane dehalogenase, subfamily 1 RAM_00970 IPR000639 Epoxide hydrolase-like RAM_00970 IPR029058 Alpha/Beta hydrolase fold RAM_00970 IPR000073 Alpha/beta hydrolase fold-1 RAM_00975 IPR004636 Acetylornithine/Succinylornithine transaminase family RAM_00975 IPR005814 Aminotransferase class-III RAM_00975 IPR015424 Pyridoxal phosphate-dependent transferase RAM_00975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_00975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_00980 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RAM_00980 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily RAM_00980 IPR015866 Serine-tRNA synthetase, type1, N-terminal RAM_00980 IPR002317 Serine-tRNA ligase, type1 RAM_00980 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_00980 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RAM_00980 IPR033729 Serine-tRNA ligase catalytic core domain RAM_00990 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_00990 IPR030862 L-2-hydroxyglutarate dehydrogenase RAM_00990 IPR006076 FAD dependent oxidoreductase RAM_01010 IPR016032 Signal transduction response regulator, C-terminal effector RAM_01010 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_01010 IPR000792 Transcription regulator LuxR, C-terminal RAM_01010 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_01010 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_01015 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB RAM_01015 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_01015 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_01015 IPR015424 Pyridoxal phosphate-dependent transferase RAM_01015 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RAM_01020 IPR001509 NAD-dependent epimerase/dehydratase RAM_01020 IPR036291 NAD(P)-binding domain superfamily RAM_01020 IPR005886 UDP-glucose 4-epimerase RAM_01030 IPR011004 Trimeric LpxA-like superfamily RAM_01030 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase RAM_01030 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily RAM_01030 IPR001451 Hexapeptide repeat RAM_01030 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal RAM_01035 IPR039425 RNA polymerase sigma-70 like RAM_01035 IPR014284 RNA polymerase sigma-70 like domain RAM_01035 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_01035 IPR007627 RNA polymerase sigma-70 region 2 RAM_01035 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_01035 IPR007630 RNA polymerase sigma-70 region 4 RAM_01035 IPR013325 RNA polymerase sigma factor, region 2 RAM_01035 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_01045 IPR007484 Peptidase M28 RAM_01045 IPR012189 Peptidase M28E, aminopeptidase AP1 RAM_01045 IPR007280 Peptidase, C-terminal, archaeal/bacterial RAM_01055 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RAM_01055 IPR015424 Pyridoxal phosphate-dependent transferase RAM_01055 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_01055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_01060 IPR011004 Trimeric LpxA-like superfamily RAM_01060 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase RAM_01060 IPR001451 Hexapeptide repeat RAM_01060 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily RAM_01060 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal RAM_01070 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_01070 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_01070 IPR036291 NAD(P)-binding domain superfamily RAM_01070 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_01075 IPR042099 AMP-dependent synthetase-like superfamily RAM_01075 IPR000873 AMP-dependent synthetase/ligase RAM_01075 IPR020845 AMP-binding, conserved site RAM_01075 IPR025110 AMP-binding enzyme, C-terminal domain RAM_01115 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase RAM_01115 IPR002123 Phospholipid/glycerol acyltransferase RAM_01120 IPR023214 HAD superfamily RAM_01120 IPR006379 HAD-superfamily hydrolase, subfamily IIB RAM_01120 IPR000150 Cof family RAM_01120 IPR036412 HAD-like superfamily RAM_01125 IPR036661 Luciferase-like domain superfamily RAM_01125 IPR011251 Luciferase-like domain RAM_01125 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c RAM_01135 IPR004379 UDP-galactopyranose mutase RAM_01135 IPR015899 UDP-galactopyranose mutase, C-terminal RAM_01140 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily RAM_01140 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RAM_01145 IPR039653 Prenyltransferase RAM_01145 IPR000537 UbiA prenyltransferase family RAM_01160 IPR036291 NAD(P)-binding domain superfamily RAM_01160 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_01160 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_01165 IPR007173 D-arabinono-1,4-lactone oxidase RAM_01165 IPR016166 FAD-binding domain, PCMH-type RAM_01165 IPR036318 FAD-binding, type PCMH-like superfamily RAM_01165 IPR016167 FAD-binding, type PCMH, subdomain 1 RAM_01165 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_01165 IPR006094 FAD linked oxidase, N-terminal RAM_01170 IPR007267 GtrA-like protein RAM_01175 IPR040492 Galactofuranosyltransferase GlfT2, N-terminal RAM_01175 IPR029044 Nucleotide-diphospho-sugar transferases RAM_01205 IPR029044 Nucleotide-diphospho-sugar transferases RAM_01210 IPR003593 AAA+ ATPase domain RAM_01210 IPR003439 ABC transporter-like RAM_01210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_01215 IPR013525 ABC-2 type transporter RAM_01220 IPR019695 Bacterial proteasome activator RAM_01225 IPR011340 Cysteine desulfurase-related RAM_01225 IPR015424 Pyridoxal phosphate-dependent transferase RAM_01225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_01225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_01225 IPR000192 Aminotransferase class V domain RAM_01230 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_01230 IPR036736 ACP-like superfamily RAM_01230 IPR001227 Acyl transferase domain superfamily RAM_01230 IPR014043 Acyl transferase RAM_01230 IPR013149 Alcohol dehydrogenase, C-terminal RAM_01230 IPR013154 Alcohol dehydrogenase, N-terminal RAM_01230 IPR011032 GroES-like superfamily RAM_01230 IPR018201 Beta-ketoacyl synthase, active site RAM_01230 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_01230 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_01230 IPR036291 NAD(P)-binding domain superfamily RAM_01230 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_01230 IPR009081 Phosphopantetheine binding ACP domain RAM_01230 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_01230 IPR013968 Polyketide synthase, ketoreductase domain RAM_01230 IPR020843 Polyketide synthase, enoylreductase domain RAM_01230 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_01230 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_01230 IPR020807 Polyketide synthase, dehydratase domain RAM_01230 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_01230 IPR016039 Thiolase-like RAM_01235 IPR003137 PA domain RAM_01235 IPR041756 Peptidase M28, SGAP-like RAM_01235 IPR007484 Peptidase M28 RAM_01240 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RAM_01280 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_01280 IPR036291 NAD(P)-binding domain superfamily RAM_01280 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_01290 IPR001789 Signal transduction response regulator, receiver domain RAM_01290 IPR011006 CheY-like superfamily RAM_01290 IPR036390 Winged helix DNA-binding domain superfamily RAM_01290 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_01290 IPR024187 Signal transduction response regulator, citrate/malate metabolism RAM_01295 IPR039506 SpoOB, alpha-helical domain RAM_01295 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB RAM_01295 IPR029151 Periplasmic sensor-like domain superfamily RAM_01295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_01295 IPR035965 PAS domain superfamily RAM_01295 IPR005467 Histidine kinase domain RAM_01295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_01295 IPR003594 Histidine kinase/HSP90-like ATPase RAM_01295 IPR033463 Single cache domain 3 RAM_01295 IPR013767 PAS fold RAM_01295 IPR000014 PAS domain RAM_01300 IPR003593 AAA+ ATPase domain RAM_01300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_01300 IPR017871 ABC transporter, conserved site RAM_01300 IPR003439 ABC transporter-like RAM_01325 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_01325 IPR029787 Nucleotide cyclase RAM_01325 IPR041664 Orc1-like, AAA ATPase domain RAM_01325 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_01325 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase RAM_01330 IPR009003 Peptidase S1, PA clan RAM_01330 IPR035070 Streptogrisin prodomain RAM_01330 IPR001316 Peptidase S1A, streptogrisin RAM_01330 IPR004236 Peptidase S1A, alpha-lytic prodomain RAM_01330 IPR033116 Serine proteases, trypsin family, serine active site RAM_01330 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_01330 IPR003610 Carbohydrate-binding module family 5/12 RAM_01330 IPR036573 Carbohydrate-binding module superfamily 5/12 RAM_01335 IPR038658 Sporulation-specific cell division protein SsgB superfamily RAM_01335 IPR006776 Sporulation-specific cell division protein SsgB RAM_01340 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_01340 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RAM_01340 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RAM_01340 IPR019888 Transcription regulator AsnC-type RAM_01340 IPR036390 Winged helix DNA-binding domain superfamily RAM_01340 IPR011008 Dimeric alpha-beta barrel RAM_01340 IPR000485 AsnC-type HTH domain RAM_01340 IPR011991 ArsR-like helix-turn-helix domain RAM_01345 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal RAM_01345 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RAM_01345 IPR016039 Thiolase-like RAM_01345 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RAM_01350 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase RAM_01350 IPR029787 Nucleotide cyclase RAM_01350 IPR003660 HAMP domain RAM_01355 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP RAM_01355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_01355 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp RAM_01360 IPR011711 GntR, C-terminal RAM_01360 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_01360 IPR000524 Transcription regulator HTH, GntR RAM_01360 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_01360 IPR036390 Winged helix DNA-binding domain superfamily RAM_01375 IPR004839 Aminotransferase, class I/classII RAM_01375 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RAM_01375 IPR005861 Histidinol-phosphate aminotransferase family RAM_01375 IPR024892 Putative phenylalanine aminotransferase RAM_01375 IPR015424 Pyridoxal phosphate-dependent transferase RAM_01375 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_01375 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_01380 IPR029058 Alpha/Beta hydrolase fold RAM_01380 IPR002925 Dienelactone hydrolase RAM_01385 IPR020845 AMP-binding, conserved site RAM_01385 IPR042099 AMP-dependent synthetase-like superfamily RAM_01385 IPR005914 Acetoacetyl-CoA synthase RAM_01385 IPR000873 AMP-dependent synthetase/ligase RAM_01385 IPR025110 AMP-binding enzyme, C-terminal domain RAM_01390 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RAM_01390 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_01390 IPR031553 Lysyl-tRNA synthetase, N-terminal transmembrane region RAM_01390 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RAM_01390 IPR012340 Nucleic acid-binding, OB-fold RAM_01390 IPR002313 Lysine-tRNA ligase, class II RAM_01390 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RAM_01390 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal RAM_01400 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_01400 IPR036116 Fibronectin type III superfamily RAM_01400 IPR003961 Fibronectin type III RAM_01400 IPR029070 Chitinase insertion domain superfamily RAM_01400 IPR013783 Immunoglobulin-like fold RAM_01400 IPR001919 Carbohydrate-binding type-2 domain RAM_01400 IPR001579 Glycoside hydrolase, chitinase active site RAM_01400 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_01400 IPR018366 Carbohydrate-binding type-2, conserved site RAM_01400 IPR011583 Chitinase II RAM_01400 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_01400 IPR017853 Glycoside hydrolase superfamily RAM_01405 IPR017853 Glycoside hydrolase superfamily RAM_01410 IPR015424 Pyridoxal phosphate-dependent transferase RAM_01410 IPR005814 Aminotransferase class-III RAM_01410 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_01410 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_01415 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_01415 IPR000847 Transcription regulator HTH, LysR RAM_01415 IPR036390 Winged helix DNA-binding domain superfamily RAM_01415 IPR005119 LysR, substrate-binding RAM_01435 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 RAM_01435 IPR011098 G5 domain RAM_01435 IPR036908 RlpA-like domain superfamily RAM_01435 IPR010611 3D domain RAM_01445 IPR023210 NADP-dependent oxidoreductase domain RAM_01445 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_01460 IPR007624 RNA polymerase sigma-70 region 3 RAM_01460 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_01460 IPR007630 RNA polymerase sigma-70 region 4 RAM_01460 IPR014284 RNA polymerase sigma-70 like domain RAM_01460 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_01460 IPR013325 RNA polymerase sigma factor, region 2 RAM_01460 IPR007627 RNA polymerase sigma-70 region 2 RAM_01460 IPR000943 RNA polymerase sigma-70 RAM_01460 IPR014322 RNA polymerase sigma-B/F/G type RAM_01465 IPR003594 Histidine kinase/HSP90-like ATPase RAM_01465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_01465 IPR010193 Serine-protein kinase RsbW RAM_01470 IPR003482 Transcription factor WhiB RAM_01470 IPR034768 WhiB-like iron-sulfur binding domain RAM_01490 IPR001647 DNA-binding HTH domain, TetR-type RAM_01490 IPR009057 Homeobox-like domain superfamily RAM_01515 IPR003439 ABC transporter-like RAM_01515 IPR003593 AAA+ ATPase domain RAM_01515 IPR025302 Domain of unknown function DUF4162 RAM_01515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_01515 IPR017871 ABC transporter, conserved site RAM_01570 IPR003099 Prephenate dehydrogenase RAM_01570 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_01570 IPR036291 NAD(P)-binding domain superfamily RAM_01575 IPR013785 Aldolase-type TIM barrel RAM_01575 IPR023753 FAD/NAD(P)-binding domain RAM_01575 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_01575 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RAM_01595 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_01595 IPR000835 MarR-type HTH domain RAM_01595 IPR036390 Winged helix DNA-binding domain superfamily RAM_01600 IPR013094 Alpha/beta hydrolase fold-3 RAM_01600 IPR029058 Alpha/Beta hydrolase fold RAM_01625 IPR022761 Fumarate lyase, N-terminal RAM_01625 IPR020557 Fumarate lyase, conserved site RAM_01625 IPR008948 L-Aspartase-like RAM_01625 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase RAM_01625 IPR000362 Fumarate lyase family RAM_01625 IPR019468 Adenylosuccinate lyase C-terminal RAM_01625 IPR024083 Fumarase/histidase, N-terminal RAM_01630 IPR010617 Endosomal/lysomomal potassium channel TMEM175 RAM_01635 IPR007061 Protein of unknown function DUF664 RAM_01635 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_01670 IPR013078 Histidine phosphatase superfamily, clade-1 RAM_01670 IPR029033 Histidine phosphatase superfamily RAM_01710 IPR000719 Protein kinase domain RAM_01710 IPR007822 Lanthionine synthetase C-like RAM_01710 IPR011009 Protein kinase-like domain superfamily RAM_01725 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RAM_01725 IPR039697 Iron-type alcohol dehydrogenase-like RAM_01725 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA RAM_01730 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_01730 IPR029061 Thiamin diphosphate-binding fold RAM_01730 IPR012782 Acetolactate synthase, catabolic RAM_01730 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_01730 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_01730 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_01730 IPR000399 TPP-binding enzyme, conserved site RAM_01740 IPR012340 Nucleic acid-binding, OB-fold RAM_01740 IPR002059 Cold-shock protein, DNA-binding RAM_01740 IPR019844 Cold-shock (CSD) domain RAM_01740 IPR012156 Cold shock, CspA RAM_01740 IPR011129 Cold shock domain RAM_01750 IPR039065 AcoX-like RAM_01750 IPR002504 NAD kinase RAM_01750 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RAM_01750 IPR011391 Acetoin catabolism kinase AcoX RAM_01750 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RAM_01755 IPR029061 Thiamin diphosphate-binding fold RAM_01755 IPR001017 Dehydrogenase, E1 component RAM_01760 IPR029016 GAF-like domain superfamily RAM_01770 IPR018313 Solute-binding protein family 3, conserved site RAM_01770 IPR001320 Ionotropic glutamate receptor RAM_01770 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RAM_01775 IPR031634 Protein kinase G, rubredoxin domain RAM_01775 IPR008271 Serine/threonine-protein kinase, active site RAM_01775 IPR031636 Protein kinase G, tetratricopeptide repeat containing domain RAM_01775 IPR011009 Protein kinase-like domain superfamily RAM_01775 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_01775 IPR000719 Protein kinase domain RAM_01790 IPR011010 DNA breaking-rejoining enzyme, catalytic core RAM_01790 IPR010998 Integrase/recombinase, N-terminal RAM_01790 IPR002104 Integrase, catalytic domain RAM_01790 IPR004107 Integrase, SAM-like, N-terminal RAM_01795 IPR041657 Helix-turn-helix domain, group 17 RAM_01795 IPR010093 SinI-like, DNA-binding domain RAM_01800 IPR022081 Domain of unknown function DUF3631 RAM_01835 IPR012340 Nucleic acid-binding, OB-fold RAM_01835 IPR011344 Single-stranded DNA-binding protein RAM_01835 IPR000424 Primosome PriB/single-strand DNA-binding RAM_01885 IPR006776 Sporulation-specific cell division protein SsgB RAM_01885 IPR038658 Sporulation-specific cell division protein SsgB superfamily RAM_01890 IPR020476 NUDIX hydrolase RAM_01890 IPR015797 NUDIX hydrolase-like domain superfamily RAM_01890 IPR020084 NUDIX hydrolase, conserved site RAM_01890 IPR000086 NUDIX hydrolase domain RAM_01890 IPR023214 HAD superfamily RAM_01890 IPR036412 HAD-like superfamily RAM_01890 IPR006357 HAD-superfamily hydrolase, subfamily IIA RAM_01910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_01910 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_01910 IPR015424 Pyridoxal phosphate-dependent transferase RAM_01910 IPR004839 Aminotransferase, class I/classII RAM_01910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_01910 IPR000524 Transcription regulator HTH, GntR RAM_01910 IPR036390 Winged helix DNA-binding domain superfamily RAM_01920 IPR015797 NUDIX hydrolase-like domain superfamily RAM_01920 IPR020476 NUDIX hydrolase RAM_01920 IPR023214 HAD superfamily RAM_01920 IPR006357 HAD-superfamily hydrolase, subfamily IIA RAM_01920 IPR036412 HAD-like superfamily RAM_01920 IPR000086 NUDIX hydrolase domain RAM_01920 IPR020084 NUDIX hydrolase, conserved site RAM_01945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_01945 IPR041698 Methyltransferase domain 25 RAM_01955 IPR038765 Papain-like cysteine peptidase superfamily RAM_01955 IPR001447 Arylamine N-acetyltransferase RAM_01960 IPR001633 EAL domain RAM_01960 IPR000160 GGDEF domain RAM_01960 IPR035919 EAL domain superfamily RAM_01960 IPR005330 MHYT domain RAM_01960 IPR029787 Nucleotide cyclase RAM_01985 IPR006043 Xanthine/uracil/vitamin C permease RAM_01985 IPR017588 Uric acid permease UacT-like RAM_01985 IPR006042 Xanthine/uracil permease RAM_01990 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal RAM_01990 IPR038071 UROD/MetE-like superfamily RAM_02000 IPR036390 Winged helix DNA-binding domain superfamily RAM_02000 IPR005471 Transcription regulator IclR, N-terminal RAM_02000 IPR014757 Transcription regulator IclR, C-terminal RAM_02000 IPR029016 GAF-like domain superfamily RAM_02000 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_02005 IPR023753 FAD/NAD(P)-binding domain RAM_02005 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_02005 IPR028202 Reductase, C-terminal RAM_02005 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_02010 IPR012733 4-hydroxybenzoate 3-monooxygenase RAM_02010 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_02010 IPR002938 FAD-binding domain RAM_02015 IPR036628 Clp, N-terminal domain superfamily RAM_02015 IPR004176 Clp, N-terminal RAM_02020 IPR006114 6-phosphogluconate dehydrogenase, C-terminal RAM_02020 IPR006184 6-phosphogluconate-binding site RAM_02020 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_02020 IPR036291 NAD(P)-binding domain superfamily RAM_02020 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_02020 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RAM_02020 IPR006183 6-phosphogluconate dehydrogenase RAM_02020 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating RAM_02025 IPR001018 Beta-lactamase, class-B, conserved site RAM_02025 IPR001279 Metallo-beta-lactamase RAM_02025 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_02085 IPR029058 Alpha/Beta hydrolase fold RAM_02085 IPR016292 Epoxide hydrolase RAM_02085 IPR000639 Epoxide hydrolase-like RAM_02085 IPR000073 Alpha/beta hydrolase fold-1 RAM_02095 IPR018713 Domain of unknown function DUF2236 RAM_02105 IPR036928 Amidase signature (AS) superfamily RAM_02105 IPR023631 Amidase signature domain RAM_02105 IPR020556 Amidase, conserved site RAM_02105 IPR000120 Amidase RAM_02115 IPR005966 D-cysteine desulfhydrase RAM_02115 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_02115 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_02115 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase RAM_02135 IPR036628 Clp, N-terminal domain superfamily RAM_02135 IPR004176 Clp, N-terminal RAM_02140 IPR038750 Uncharacterized protein YczE/YyaS-like RAM_02145 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_02145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_02145 IPR000524 Transcription regulator HTH, GntR RAM_02145 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_02145 IPR036390 Winged helix DNA-binding domain superfamily RAM_02145 IPR015424 Pyridoxal phosphate-dependent transferase RAM_02145 IPR004839 Aminotransferase, class I/classII RAM_02155 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_02155 IPR015424 Pyridoxal phosphate-dependent transferase RAM_02155 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_02155 IPR004839 Aminotransferase, class I/classII RAM_02160 IPR007383 Protein of unknown function DUF445 RAM_02180 IPR023000 Shikimate kinase, conserved site RAM_02180 IPR000623 Shikimate kinase/Threonine synthase-like 1 RAM_02180 IPR031322 Shikimate kinase/gluconokinase RAM_02180 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_02185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_02185 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase RAM_02190 IPR001387 Cro/C1-type helix-turn-helix domain RAM_02190 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_02200 IPR019662 Protein of unknown function DUF2516 RAM_02210 IPR003462 Ornithine cyclodeaminase/mu-crystallin RAM_02210 IPR023401 Ornithine cyclodeaminase, N-terminal RAM_02210 IPR036291 NAD(P)-binding domain superfamily RAM_02215 IPR022313 Phenylalanine/histidine ammonia-lyases, active site RAM_02215 IPR005921 Histidine ammonia-lyase RAM_02215 IPR008948 L-Aspartase-like RAM_02215 IPR001106 Aromatic amino acid lyase RAM_02215 IPR024083 Fumarase/histidase, N-terminal RAM_02245 IPR035906 MetI-like superfamily RAM_02245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_02255 IPR013216 Methyltransferase type 11 RAM_02255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_02260 IPR011991 ArsR-like helix-turn-helix domain RAM_02260 IPR000835 MarR-type HTH domain RAM_02260 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_02260 IPR036390 Winged helix DNA-binding domain superfamily RAM_02270 IPR020843 Polyketide synthase, enoylreductase domain RAM_02270 IPR036291 NAD(P)-binding domain superfamily RAM_02270 IPR011032 GroES-like superfamily RAM_02270 IPR041694 Oxidoreductase, N-terminal domain RAM_02270 IPR013149 Alcohol dehydrogenase, C-terminal RAM_02285 IPR013149 Alcohol dehydrogenase, C-terminal RAM_02285 IPR020843 Polyketide synthase, enoylreductase domain RAM_02285 IPR036291 NAD(P)-binding domain superfamily RAM_02285 IPR011032 GroES-like superfamily RAM_02285 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_02285 IPR013154 Alcohol dehydrogenase, N-terminal RAM_02290 IPR002912 ACT domain RAM_02290 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain RAM_02290 IPR002376 Formyl transferase, N-terminal RAM_02290 IPR036477 Formyl transferase, N-terminal domain superfamily RAM_02290 IPR004810 Formyltetrahydrofolate deformylase RAM_02315 IPR036318 FAD-binding, type PCMH-like superfamily RAM_02315 IPR016166 FAD-binding domain, PCMH-type RAM_02315 IPR016167 FAD-binding, type PCMH, subdomain 1 RAM_02315 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_02315 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase RAM_02315 IPR006094 FAD linked oxidase, N-terminal RAM_02315 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily RAM_02315 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal RAM_02320 IPR041280 Bacterial Ig domain, transpeptidase-associated RAM_02320 IPR005490 L,D-transpeptidase catalytic domain RAM_02320 IPR038063 L,D-transpeptidase catalytic domain-like RAM_02325 IPR000073 Alpha/beta hydrolase fold-1 RAM_02325 IPR000639 Epoxide hydrolase-like RAM_02325 IPR029058 Alpha/Beta hydrolase fold RAM_02330 IPR017814 Mycothiol biosynthesis protein, MshA RAM_02330 IPR001296 Glycosyl transferase, family 1 RAM_02330 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_02335 IPR019660 Putative sensory transduction regulator YbjN RAM_02345 IPR005952 Phosphoglycerate mutase 1 RAM_02345 IPR013078 Histidine phosphatase superfamily, clade-1 RAM_02345 IPR029033 Histidine phosphatase superfamily RAM_02355 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_02355 IPR023210 NADP-dependent oxidoreductase domain RAM_02360 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_02360 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_02360 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_02360 IPR005467 Histidine kinase domain RAM_02360 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_02360 IPR003594 Histidine kinase/HSP90-like ATPase RAM_02365 IPR039420 Transcriptional regulatory protein WalR-like RAM_02365 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_02365 IPR011006 CheY-like superfamily RAM_02365 IPR016032 Signal transduction response regulator, C-terminal effector RAM_02365 IPR001789 Signal transduction response regulator, receiver domain RAM_02365 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_02370 IPR003695 Ppx/GppA phosphatase RAM_02380 IPR036237 Xylose isomerase-like superfamily RAM_02380 IPR013022 Xylose isomerase-like, TIM barrel domain RAM_02390 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain RAM_02390 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RAM_02390 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_02390 IPR036291 NAD(P)-binding domain superfamily RAM_02390 IPR000304 Pyrroline-5-carboxylate reductase RAM_02395 IPR009061 Putative DNA-binding domain superfamily RAM_02395 IPR041657 Helix-turn-helix domain, group 17 RAM_02395 IPR010093 SinI-like, DNA-binding domain RAM_02405 IPR001509 NAD-dependent epimerase/dehydratase RAM_02405 IPR036291 NAD(P)-binding domain superfamily RAM_02410 IPR002123 Phospholipid/glycerol acyltransferase RAM_02410 IPR016676 Phospholipid/glycerol acyltransferase, predicted RAM_02415 IPR005467 Histidine kinase domain RAM_02415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_02415 IPR003594 Histidine kinase/HSP90-like ATPase RAM_02420 IPR000792 Transcription regulator LuxR, C-terminal RAM_02420 IPR016032 Signal transduction response regulator, C-terminal effector RAM_02420 IPR011006 CheY-like superfamily RAM_02420 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_02420 IPR001789 Signal transduction response regulator, receiver domain RAM_02430 IPR023214 HAD superfamily RAM_02430 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like RAM_02430 IPR036412 HAD-like superfamily RAM_02440 IPR039425 RNA polymerase sigma-70 like RAM_02440 IPR007627 RNA polymerase sigma-70 region 2 RAM_02440 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_02440 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_02440 IPR013325 RNA polymerase sigma factor, region 2 RAM_02440 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_02440 IPR014284 RNA polymerase sigma-70 like domain RAM_02440 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_02445 IPR042099 AMP-dependent synthetase-like superfamily RAM_02445 IPR020845 AMP-binding, conserved site RAM_02445 IPR020459 AMP-binding RAM_02445 IPR025110 AMP-binding enzyme, C-terminal domain RAM_02445 IPR000873 AMP-dependent synthetase/ligase RAM_02450 IPR008554 Glutaredoxin-like RAM_02450 IPR036249 Thioredoxin-like superfamily RAM_02460 IPR036390 Winged helix DNA-binding domain superfamily RAM_02460 IPR003781 CoA-binding RAM_02460 IPR022876 Redox-sensing transcriptional repressor Rex RAM_02460 IPR036291 NAD(P)-binding domain superfamily RAM_02460 IPR009718 Rex DNA-binding, C-terminal domain RAM_02460 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_02465 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily RAM_02465 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily RAM_02465 IPR036291 NAD(P)-binding domain superfamily RAM_02465 IPR018214 Glutamyl-tRNA reductase, conserved site RAM_02465 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase RAM_02465 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain RAM_02465 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal RAM_02465 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RAM_02470 IPR022418 Porphobilinogen deaminase, C-terminal RAM_02470 IPR022417 Porphobilinogen deaminase, N-terminal RAM_02470 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily RAM_02470 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site RAM_02470 IPR000860 Porphobilinogen deaminase RAM_02475 IPR028281 Siroheme synthase, central domain RAM_02475 IPR012409 Sirohaem synthase RAM_02475 IPR006367 Sirohaem synthase, N-terminal RAM_02475 IPR036291 NAD(P)-binding domain superfamily RAM_02475 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RAM_02475 IPR000878 Tetrapyrrole methylase RAM_02475 IPR014776 Tetrapyrrole methylase, subdomain 2 RAM_02475 IPR035996 Tetrapyrrole methylase superfamily RAM_02475 IPR006366 Uroporphyrin-III C-methyltransferase RAM_02475 IPR014777 Tetrapyrrole methylase, subdomain 1 RAM_02475 IPR019478 Sirohaem synthase, dimerisation domain RAM_02475 IPR037115 Sirohaem synthase, dimerisation domain superfamily RAM_02480 IPR016040 NAD(P)-binding domain RAM_02480 IPR005886 UDP-glucose 4-epimerase RAM_02480 IPR036291 NAD(P)-binding domain superfamily RAM_02490 IPR013785 Aldolase-type TIM barrel RAM_02490 IPR001731 Delta-aminolevulinic acid dehydratase RAM_02490 IPR030656 Delta-aminolevulinic acid dehydratase, active site RAM_02510 IPR006143 RND efflux pump, membrane fusion protein RAM_02510 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain RAM_02510 IPR030190 Macrolide export protein MacA RAM_02515 IPR017871 ABC transporter, conserved site RAM_02515 IPR003439 ABC transporter-like RAM_02515 IPR003838 ABC transporter permease protein domain RAM_02515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_02515 IPR025857 MacB-like periplasmic core domain RAM_02515 IPR017911 ABC transporter, macrolide export, ATP-binding domain RAM_02515 IPR003593 AAA+ ATPase domain RAM_02520 IPR025857 MacB-like periplasmic core domain RAM_02520 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_02520 IPR017911 ABC transporter, macrolide export, ATP-binding domain RAM_02520 IPR017871 ABC transporter, conserved site RAM_02520 IPR003439 ABC transporter-like RAM_02520 IPR003838 ABC transporter permease protein domain RAM_02520 IPR003593 AAA+ ATPase domain RAM_02535 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase RAM_02535 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_02535 IPR005814 Aminotransferase class-III RAM_02535 IPR015424 Pyridoxal phosphate-dependent transferase RAM_02535 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_02540 IPR029033 Histidine phosphatase superfamily RAM_02540 IPR013078 Histidine phosphatase superfamily, clade-1 RAM_02545 IPR013766 Thioredoxin domain RAM_02545 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RAM_02545 IPR036249 Thioredoxin-like superfamily RAM_02545 IPR017937 Thioredoxin, conserved site RAM_02550 IPR003834 Cytochrome C biogenesis protein, transmembrane domain RAM_02560 IPR017562 Cytochrome c-type biogenesis protein CcsA RAM_02560 IPR003557 Cytochrome c-type biogenesis protein CcmC RAM_02560 IPR002541 Cytochrome c assembly protein RAM_02565 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RAM_02565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_02580 IPR011008 Dimeric alpha-beta barrel RAM_02580 IPR036390 Winged helix DNA-binding domain superfamily RAM_02580 IPR019888 Transcription regulator AsnC-type RAM_02580 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RAM_02580 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RAM_02580 IPR011991 ArsR-like helix-turn-helix domain RAM_02580 IPR000485 AsnC-type HTH domain RAM_02580 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_02595 IPR000537 UbiA prenyltransferase family RAM_02595 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase RAM_02595 IPR026046 UbiA prenyltransferase domain containing protein 1 RAM_02605 IPR000873 AMP-dependent synthetase/ligase RAM_02605 IPR025110 AMP-binding enzyme, C-terminal domain RAM_02605 IPR042099 AMP-dependent synthetase-like superfamily RAM_02605 IPR020845 AMP-binding, conserved site RAM_02610 IPR029045 ClpP/crotonase-like domain superfamily RAM_02610 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB RAM_02610 IPR001753 Enoyl-CoA hydratase/isomerase RAM_02610 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_02615 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_02615 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_02615 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase RAM_02615 IPR029061 Thiamin diphosphate-binding fold RAM_02620 IPR042097 Aminopeptidase N-like , N-terminal RAM_02620 IPR024571 ERAP1-like C-terminal domain RAM_02620 IPR014782 Peptidase M1, membrane alanine aminopeptidase RAM_02620 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase RAM_02620 IPR034016 Aminopeptidase N-type RAM_02630 IPR022337 Inositol monophosphatase, SuhB RAM_02630 IPR033942 Inositol monophosphatase RAM_02630 IPR020583 Inositol monophosphatase, metal-binding site RAM_02630 IPR020550 Inositol monophosphatase, conserved site RAM_02630 IPR000760 Inositol monophosphatase-like RAM_02635 IPR001296 Glycosyl transferase, family 1 RAM_02635 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_02640 IPR001296 Glycosyl transferase, family 1 RAM_02640 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_02655 IPR023576 UbiE/COQ5 methyltransferase, conserved site RAM_02655 IPR004033 UbiE/COQ5 methyltransferase RAM_02655 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_02660 IPR011777 Geranylgeranyl reductase family RAM_02660 IPR002938 FAD-binding domain RAM_02660 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_02665 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 RAM_02665 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid RAM_02665 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily RAM_02670 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RAM_02670 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit RAM_02675 IPR010218 NADH dehydrogenase, subunit C RAM_02675 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily RAM_02675 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit RAM_02680 IPR001135 NADH-quinone oxidoreductase, subunit D RAM_02680 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily RAM_02680 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site RAM_02680 IPR029014 [NiFe]-hydrogenase, large subunit RAM_02680 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H RAM_02685 IPR036249 Thioredoxin-like superfamily RAM_02685 IPR042128 NuoE domain RAM_02685 IPR002023 NADH-quinone oxidoreductase subunit E-like RAM_02685 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal RAM_02690 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain RAM_02690 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily RAM_02690 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily RAM_02690 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain RAM_02690 IPR011537 NADH ubiquinone oxidoreductase, F subunit RAM_02690 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RAM_02690 IPR019554 Soluble ligand binding domain RAM_02695 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site RAM_02695 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_02695 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_02695 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RAM_02695 IPR010228 NADH:ubiquinone oxidoreductase, subunit G RAM_02695 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_02695 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RAM_02695 IPR006656 Molybdopterin oxidoreductase RAM_02695 IPR006657 Molybdopterin dinucleotide-binding domain RAM_02700 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H RAM_02700 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site RAM_02705 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_02705 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_02705 IPR010226 NADH-quinone oxidoreductase, chain I RAM_02710 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 RAM_02710 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ RAM_02715 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like RAM_02715 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K RAM_02720 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RAM_02720 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RAM_02720 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RAM_02720 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 RAM_02725 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RAM_02725 IPR003918 NADH:ubiquinone oxidoreductase RAM_02725 IPR010227 NADH-quinone oxidoreductase, chain M/4 RAM_02730 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 RAM_02730 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RAM_02730 IPR003918 NADH:ubiquinone oxidoreductase RAM_02755 IPR000092 Polyprenyl synthetase RAM_02755 IPR008949 Isoprenoid synthase domain superfamily RAM_02755 IPR014119 Heptaprenyl diphosphate synthase component II RAM_02755 IPR033749 Polyprenyl synthetase, conserved site RAM_02770 IPR029061 Thiamin diphosphate-binding fold RAM_02770 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_02775 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain RAM_02775 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_02775 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit RAM_02775 IPR029061 Thiamin diphosphate-binding fold RAM_02775 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal RAM_02775 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain RAM_02775 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II RAM_02780 IPR001753 Enoyl-CoA hydratase/isomerase RAM_02780 IPR029045 ClpP/crotonase-like domain superfamily RAM_02780 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_02785 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RAM_02785 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_02785 IPR019888 Transcription regulator AsnC-type RAM_02785 IPR011008 Dimeric alpha-beta barrel RAM_02785 IPR000485 AsnC-type HTH domain RAM_02785 IPR011991 ArsR-like helix-turn-helix domain RAM_02785 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RAM_02785 IPR036390 Winged helix DNA-binding domain superfamily RAM_02805 IPR028358 GDP-mannose 6-dehydrogenase RAM_02805 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RAM_02805 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RAM_02805 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily RAM_02805 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RAM_02805 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RAM_02805 IPR036291 NAD(P)-binding domain superfamily RAM_02805 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_02810 IPR001296 Glycosyl transferase, family 1 RAM_02810 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_02810 IPR017814 Mycothiol biosynthesis protein, MshA RAM_02825 IPR017932 Glutamine amidotransferase type 2 domain RAM_02825 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_02825 IPR033738 Asparagine synthase, N-terminal domain RAM_02825 IPR001962 Asparagine synthase RAM_02825 IPR006426 Asparagine synthase, glutamine-hydrolyzing RAM_02830 IPR011032 GroES-like superfamily RAM_02830 IPR036291 NAD(P)-binding domain superfamily RAM_02830 IPR013149 Alcohol dehydrogenase, C-terminal RAM_02850 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_02850 IPR001296 Glycosyl transferase, family 1 RAM_02870 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase RAM_02870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_02870 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_02870 IPR015424 Pyridoxal phosphate-dependent transferase RAM_02870 IPR005814 Aminotransferase class-III RAM_02875 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related RAM_02875 IPR014710 RmlC-like jelly roll fold RAM_02875 IPR011051 RmlC-like cupin domain superfamily RAM_02885 IPR001173 Glycosyltransferase 2-like RAM_02885 IPR029044 Nucleotide-diphospho-sugar transferases RAM_02895 IPR012353 Uncharacterised conserved protein UCP01524, polysaccharide biosynthesis aminopeptidase-like RAM_02895 IPR032622 UCP01524, winged helix-turn-helix domain RAM_02895 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_02895 IPR032589 Domain of unknown function DUF4910 RAM_02895 IPR032610 Domain of unknown function DUF2172 RAM_02900 IPR005886 UDP-glucose 4-epimerase RAM_02900 IPR036291 NAD(P)-binding domain superfamily RAM_02900 IPR016040 NAD(P)-binding domain RAM_02910 IPR013446 Glucose-1-phosphate cytidylyltransferase RAM_02910 IPR005835 Nucleotidyl transferase domain RAM_02910 IPR029044 Nucleotide-diphospho-sugar transferases RAM_02915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_02915 IPR013691 C-methyltransferase RAM_02915 IPR038576 Methyltransferase putative zinc binding domain superfamily RAM_02915 IPR013630 Methyltransferase putative zinc binding domain RAM_02925 IPR036661 Luciferase-like domain superfamily RAM_02925 IPR011251 Luciferase-like domain RAM_02925 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c RAM_02935 IPR001915 Peptidase M48 RAM_02935 IPR022919 Peptidase M48, protease HtpX, putative RAM_02950 IPR029044 Nucleotide-diphospho-sugar transferases RAM_02950 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form RAM_02950 IPR005835 Nucleotidyl transferase domain RAM_02965 IPR036183 YajQ-like superfamily RAM_02965 IPR035571 UPF0234-like, C-terminal RAM_02965 IPR035570 UPF0234, N-terminal RAM_02965 IPR007551 Protein of unknown function DUF520 RAM_02975 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC RAM_02975 IPR013216 Methyltransferase type 11 RAM_02975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_02980 IPR015947 PUA-like superfamily RAM_02980 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_02980 IPR003959 ATPase, AAA-type, core RAM_02980 IPR027543 Lon protease, bacterial RAM_02980 IPR004815 Lon protease, bacterial/eukaryotic-type RAM_02980 IPR008269 Peptidase S16, Lon proteolytic domain RAM_02980 IPR027065 Lon protease RAM_02980 IPR003111 Lon, substrate-binding domain RAM_02980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_02980 IPR008268 Peptidase S16, active site RAM_02980 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_02980 IPR003593 AAA+ ATPase domain RAM_02995 IPR029787 Nucleotide cyclase RAM_02995 IPR005330 MHYT domain RAM_02995 IPR000160 GGDEF domain RAM_02995 IPR001633 EAL domain RAM_02995 IPR035919 EAL domain superfamily RAM_03000 IPR038584 Ribosomal protein L33 superfamily RAM_03000 IPR001705 Ribosomal protein L33 RAM_03000 IPR018264 Ribosomal protein L33, conserved site RAM_03000 IPR011332 Zinc-binding ribosomal protein RAM_03005 IPR029069 HotDog domain superfamily RAM_03005 IPR039569 N-terminal of MaoC-like dehydratase RAM_03005 IPR016709 Uncharacterised protein family UPF0336 RAM_03025 IPR036390 Winged helix DNA-binding domain superfamily RAM_03025 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_03025 IPR000524 Transcription regulator HTH, GntR RAM_03030 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted RAM_03030 IPR011251 Luciferase-like domain RAM_03030 IPR036661 Luciferase-like domain superfamily RAM_03035 IPR038379 SecE superfamily RAM_03035 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit RAM_03035 IPR005807 SecE subunit of protein translocation complex, bacterial-like RAM_03040 IPR036735 NusG, N-terminal domain superfamily RAM_03040 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RAM_03040 IPR008991 Translation protein SH3-like domain superfamily RAM_03040 IPR006645 NusG, N-terminal RAM_03040 IPR014722 Ribosomal protein L2, domain 2 RAM_03040 IPR001062 Transcription antitermination protein, NusG RAM_03045 IPR020783 Ribosomal protein L11, C-terminal RAM_03045 IPR000911 Ribosomal protein L11/L12 RAM_03045 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily RAM_03045 IPR020784 Ribosomal protein L11, N-terminal RAM_03045 IPR020785 Ribosomal protein L11, conserved site RAM_03045 IPR036769 Ribosomal protein L11, C-terminal domain superfamily RAM_03045 IPR006519 Ribosomal protein L11, bacterial-type RAM_03050 IPR002143 Ribosomal protein L1 RAM_03050 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RAM_03050 IPR023674 Ribosomal protein L1-like RAM_03050 IPR023673 Ribosomal protein L1, conserved site RAM_03050 IPR005878 Ribosomal protein L1, bacterial-type RAM_03050 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RAM_03055 IPR029058 Alpha/Beta hydrolase fold RAM_03055 IPR000073 Alpha/beta hydrolase fold-1 RAM_03055 IPR019913 Pyrimidine utilisation protein RutD RAM_03065 IPR002363 Ribosomal protein L10, eubacterial, conserved site RAM_03065 IPR022973 Ribosomal protein L10 RAM_03065 IPR001790 Ribosomal protein L10P RAM_03070 IPR000206 Ribosomal protein L7/L12 RAM_03070 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RAM_03070 IPR008932 Ribosomal protein L7/L12, oligomerisation RAM_03070 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily RAM_03070 IPR013823 Ribosomal protein L7/L12, C-terminal RAM_03075 IPR003439 ABC transporter-like RAM_03075 IPR017871 ABC transporter, conserved site RAM_03075 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl RAM_03075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_03075 IPR003593 AAA+ ATPase domain RAM_03085 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RAM_03085 IPR030802 ABC transporter permease MalE RAM_03110 IPR003399 Mce/MlaD RAM_03110 IPR005693 Virulence factor Mce protein RAM_03135 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase RAM_03135 IPR036291 NAD(P)-binding domain superfamily RAM_03135 IPR000683 Oxidoreductase, N-terminal RAM_03135 IPR004104 Oxidoreductase, C-terminal RAM_03150 IPR036396 Cytochrome P450 superfamily RAM_03150 IPR017972 Cytochrome P450, conserved site RAM_03150 IPR002397 Cytochrome P450, B-class RAM_03150 IPR001128 Cytochrome P450 RAM_03155 IPR001031 Thioesterase RAM_03155 IPR020802 Polyketide synthase, thioesterase domain RAM_03155 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_03155 IPR013968 Polyketide synthase, ketoreductase domain RAM_03155 IPR041618 Polyketide synthase dimerisation element domain RAM_03155 IPR016039 Thiolase-like RAM_03155 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_03155 IPR036291 NAD(P)-binding domain superfamily RAM_03155 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_03155 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_03155 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_03155 IPR018201 Beta-ketoacyl synthase, active site RAM_03155 IPR006162 Phosphopantetheine attachment site RAM_03155 IPR029058 Alpha/Beta hydrolase fold RAM_03155 IPR001227 Acyl transferase domain superfamily RAM_03155 IPR036736 ACP-like superfamily RAM_03155 IPR014043 Acyl transferase RAM_03155 IPR009081 Phosphopantetheine binding ACP domain RAM_03155 IPR036299 Polyketide synthase, docking domain superfmaily RAM_03155 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_03155 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_03155 IPR015083 Polyketide synthase, docking domain RAM_03160 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_03160 IPR016039 Thiolase-like RAM_03160 IPR018201 Beta-ketoacyl synthase, active site RAM_03160 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_03160 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_03160 IPR006162 Phosphopantetheine attachment site RAM_03160 IPR009081 Phosphopantetheine binding ACP domain RAM_03160 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_03160 IPR013968 Polyketide synthase, ketoreductase domain RAM_03160 IPR014043 Acyl transferase RAM_03160 IPR036736 ACP-like superfamily RAM_03160 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_03160 IPR036291 NAD(P)-binding domain superfamily RAM_03160 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_03160 IPR020807 Polyketide synthase, dehydratase domain RAM_03160 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_03160 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_03160 IPR001227 Acyl transferase domain superfamily RAM_03165 IPR011032 GroES-like superfamily RAM_03165 IPR036736 ACP-like superfamily RAM_03165 IPR001227 Acyl transferase domain superfamily RAM_03165 IPR036736 ACP-like superfamily RAM_03165 IPR014043 Acyl transferase RAM_03165 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_03165 IPR013154 Alcohol dehydrogenase, N-terminal RAM_03165 IPR001227 Acyl transferase domain superfamily RAM_03165 IPR018201 Beta-ketoacyl synthase, active site RAM_03165 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_03165 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_03165 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_03165 IPR036291 NAD(P)-binding domain superfamily RAM_03165 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_03165 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_03165 IPR020807 Polyketide synthase, dehydratase domain RAM_03165 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_03165 IPR013968 Polyketide synthase, ketoreductase domain RAM_03165 IPR014043 Acyl transferase RAM_03165 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_03165 IPR016039 Thiolase-like RAM_03165 IPR006162 Phosphopantetheine attachment site RAM_03165 IPR036291 NAD(P)-binding domain superfamily RAM_03165 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_03165 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_03165 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_03165 IPR020807 Polyketide synthase, dehydratase domain RAM_03165 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_03165 IPR020843 Polyketide synthase, enoylreductase domain RAM_03165 IPR013968 Polyketide synthase, ketoreductase domain RAM_03165 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_03165 IPR015083 Polyketide synthase, docking domain RAM_03165 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_03165 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_03165 IPR018201 Beta-ketoacyl synthase, active site RAM_03165 IPR011032 GroES-like superfamily RAM_03165 IPR013154 Alcohol dehydrogenase, N-terminal RAM_03165 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_03165 IPR009081 Phosphopantetheine binding ACP domain RAM_03165 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_03165 IPR015083 Polyketide synthase, docking domain RAM_03165 IPR020843 Polyketide synthase, enoylreductase domain RAM_03165 IPR006162 Phosphopantetheine attachment site RAM_03165 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_03165 IPR016039 Thiolase-like RAM_03165 IPR009081 Phosphopantetheine binding ACP domain RAM_03170 IPR018201 Beta-ketoacyl synthase, active site RAM_03170 IPR006162 Phosphopantetheine attachment site RAM_03170 IPR011032 GroES-like superfamily RAM_03170 IPR013154 Alcohol dehydrogenase, N-terminal RAM_03170 IPR014043 Acyl transferase RAM_03170 IPR001227 Acyl transferase domain superfamily RAM_03170 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_03170 IPR011032 GroES-like superfamily RAM_03170 IPR013154 Alcohol dehydrogenase, N-terminal RAM_03170 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_03170 IPR014043 Acyl transferase RAM_03170 IPR036736 ACP-like superfamily RAM_03170 IPR036736 ACP-like superfamily RAM_03170 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_03170 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_03170 IPR020843 Polyketide synthase, enoylreductase domain RAM_03170 IPR020807 Polyketide synthase, dehydratase domain RAM_03170 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_03170 IPR013968 Polyketide synthase, ketoreductase domain RAM_03170 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_03170 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_03170 IPR036291 NAD(P)-binding domain superfamily RAM_03170 IPR020807 Polyketide synthase, dehydratase domain RAM_03170 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_03170 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_03170 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_03170 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_03170 IPR018201 Beta-ketoacyl synthase, active site RAM_03170 IPR036291 NAD(P)-binding domain superfamily RAM_03170 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_03170 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_03170 IPR016039 Thiolase-like RAM_03170 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_03170 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_03170 IPR006162 Phosphopantetheine attachment site RAM_03170 IPR020843 Polyketide synthase, enoylreductase domain RAM_03170 IPR013968 Polyketide synthase, ketoreductase domain RAM_03170 IPR009081 Phosphopantetheine binding ACP domain RAM_03170 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_03170 IPR001227 Acyl transferase domain superfamily RAM_03170 IPR015083 Polyketide synthase, docking domain RAM_03170 IPR016039 Thiolase-like RAM_03170 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_03170 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_03170 IPR015083 Polyketide synthase, docking domain RAM_03170 IPR009081 Phosphopantetheine binding ACP domain RAM_03175 IPR016039 Thiolase-like RAM_03175 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_03175 IPR036291 NAD(P)-binding domain superfamily RAM_03175 IPR020843 Polyketide synthase, enoylreductase domain RAM_03175 IPR013154 Alcohol dehydrogenase, N-terminal RAM_03175 IPR011032 GroES-like superfamily RAM_03175 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_03175 IPR020807 Polyketide synthase, dehydratase domain RAM_03175 IPR018201 Beta-ketoacyl synthase, active site RAM_03175 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_03175 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_03175 IPR013968 Polyketide synthase, ketoreductase domain RAM_03175 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_03175 IPR001227 Acyl transferase domain superfamily RAM_03175 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_03175 IPR006162 Phosphopantetheine attachment site RAM_03175 IPR009081 Phosphopantetheine binding ACP domain RAM_03175 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_03175 IPR036736 ACP-like superfamily RAM_03175 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_03175 IPR014043 Acyl transferase RAM_03175 IPR015083 Polyketide synthase, docking domain RAM_03175 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_03180 IPR001447 Arylamine N-acetyltransferase RAM_03180 IPR038765 Papain-like cysteine peptidase superfamily RAM_03190 IPR030960 3-dehydroquinate synthase domain RAM_03195 IPR013785 Aldolase-type TIM barrel RAM_03195 IPR002480 DAHP synthetase, class II RAM_03200 IPR041121 SDH, C-terminal RAM_03200 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal RAM_03200 IPR022893 Shikimate dehydrogenase family RAM_03200 IPR036291 NAD(P)-binding domain superfamily RAM_03205 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_03205 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RAM_03205 IPR015424 Pyridoxal phosphate-dependent transferase RAM_03205 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_03210 IPR004104 Oxidoreductase, C-terminal RAM_03210 IPR000683 Oxidoreductase, N-terminal RAM_03210 IPR036291 NAD(P)-binding domain superfamily RAM_03215 IPR036412 HAD-like superfamily RAM_03215 IPR041492 Haloacid dehalogenase-like hydrolase RAM_03215 IPR037512 Phosphoglycolate phosphatase, prokaryotic RAM_03215 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RAM_03215 IPR023214 HAD superfamily RAM_03215 IPR006439 HAD hydrolase, subfamily IA RAM_03215 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic RAM_03220 IPR000600 ROK family RAM_03225 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RAM_03225 IPR017810 Mycothiol biosynthesis protein, MshB RAM_03225 IPR024078 Putative deacetylase LmbE-like domain superfamily RAM_03230 IPR013094 Alpha/beta hydrolase fold-3 RAM_03230 IPR002168 Lipase, GDXG, putative histidine active site RAM_03230 IPR029058 Alpha/Beta hydrolase fold RAM_03230 IPR033140 Lipase, GDXG, putative serine active site RAM_03235 IPR020846 Major facilitator superfamily domain RAM_03235 IPR036259 MFS transporter superfamily RAM_03235 IPR011701 Major facilitator superfamily RAM_03250 IPR036396 Cytochrome P450 superfamily RAM_03250 IPR001128 Cytochrome P450 RAM_03250 IPR017972 Cytochrome P450, conserved site RAM_03250 IPR002397 Cytochrome P450, B-class RAM_03255 IPR017972 Cytochrome P450, conserved site RAM_03255 IPR036396 Cytochrome P450 superfamily RAM_03255 IPR002397 Cytochrome P450, B-class RAM_03255 IPR001128 Cytochrome P450 RAM_03260 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RAM_03260 IPR015424 Pyridoxal phosphate-dependent transferase RAM_03260 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_03260 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_03265 IPR010610 Domain of unknown function DUF1205 RAM_03265 IPR030953 Glycosyltransferase, activator-dependent family RAM_03270 IPR011051 RmlC-like cupin domain superfamily RAM_03270 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related RAM_03270 IPR014710 RmlC-like jelly roll fold RAM_03275 IPR015424 Pyridoxal phosphate-dependent transferase RAM_03275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_03275 IPR005814 Aminotransferase class-III RAM_03275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_03280 IPR036291 NAD(P)-binding domain superfamily RAM_03280 IPR000683 Oxidoreductase, N-terminal RAM_03290 IPR036661 Luciferase-like domain superfamily RAM_03290 IPR011251 Luciferase-like domain RAM_03295 IPR038153 NDP-hexose 2,3-dehydratase-like superfamily RAM_03295 IPR005212 NDP-hexose 2,3-dehydratase RAM_03300 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase RAM_03300 IPR002938 FAD-binding domain RAM_03300 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_03310 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_03310 IPR029058 Alpha/Beta hydrolase fold RAM_03310 IPR020802 Polyketide synthase, thioesterase domain RAM_03310 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS RAM_03310 IPR001031 Thioesterase RAM_03315 IPR001128 Cytochrome P450 RAM_03315 IPR036396 Cytochrome P450 superfamily RAM_03315 IPR002397 Cytochrome P450, B-class RAM_03315 IPR017972 Cytochrome P450, conserved site RAM_03320 IPR020803 Polyketide synthase, methyltransferase domain RAM_03320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_03320 IPR013216 Methyltransferase type 11 RAM_03325 IPR005474 Transketolase, N-terminal RAM_03325 IPR029061 Thiamin diphosphate-binding fold RAM_03325 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_03330 IPR005475 Transketolase-like, pyrimidine-binding domain RAM_03330 IPR029061 Thiamin diphosphate-binding fold RAM_03330 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_03335 IPR017972 Cytochrome P450, conserved site RAM_03335 IPR036396 Cytochrome P450 superfamily RAM_03335 IPR001128 Cytochrome P450 RAM_03335 IPR002397 Cytochrome P450, B-class RAM_03340 IPR018509 Dehydroquinase, class II, conserved site RAM_03340 IPR001874 Dehydroquinase, class II RAM_03340 IPR036441 Dehydroquinase, class II superfamily RAM_03345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_03345 IPR000792 Transcription regulator LuxR, C-terminal RAM_03345 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_03345 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_03345 IPR016032 Signal transduction response regulator, C-terminal effector RAM_03350 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain RAM_03350 IPR015712 DNA-directed RNA polymerase, subunit 2 RAM_03350 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain RAM_03350 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily RAM_03350 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily RAM_03350 IPR007121 RNA polymerase, beta subunit, conserved site RAM_03350 IPR007641 RNA polymerase Rpb2, domain 7 RAM_03350 IPR007645 RNA polymerase Rpb2, domain 3 RAM_03350 IPR037034 RNA polymerase Rpb2, domain 2 superfamily RAM_03350 IPR014724 RNA polymerase Rpb2, OB-fold RAM_03350 IPR007642 RNA polymerase Rpb2, domain 2 RAM_03350 IPR007644 RNA polymerase, beta subunit, protrusion RAM_03350 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type RAM_03355 IPR006592 RNA polymerase, N-terminal RAM_03355 IPR000722 RNA polymerase, alpha subunit RAM_03355 IPR007080 RNA polymerase Rpb1, domain 1 RAM_03355 IPR007066 RNA polymerase Rpb1, domain 3 RAM_03355 IPR007083 RNA polymerase Rpb1, domain 4 RAM_03355 IPR007081 RNA polymerase Rpb1, domain 5 RAM_03355 IPR038120 RNA polymerase Rpb1, funnel domain superfamily RAM_03355 IPR012754 DNA-directed RNA polymerase, subunit beta-prime RAM_03355 IPR042102 RNA polymerase Rpb1, domain 3 superfamily RAM_03365 IPR000755 D-alanyl-D-alanine dipeptidase RAM_03365 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily RAM_03370 IPR036390 Winged helix DNA-binding domain superfamily RAM_03370 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_03370 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RAM_03370 IPR011008 Dimeric alpha-beta barrel RAM_03370 IPR000485 AsnC-type HTH domain RAM_03370 IPR019888 Transcription regulator AsnC-type RAM_03370 IPR011991 ArsR-like helix-turn-helix domain RAM_03370 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RAM_03375 IPR036259 MFS transporter superfamily RAM_03375 IPR011701 Major facilitator superfamily RAM_03375 IPR020846 Major facilitator superfamily domain RAM_03385 IPR000182 GNAT domain RAM_03385 IPR018488 Cyclic nucleotide-binding, conserved site RAM_03385 IPR018490 Cyclic nucleotide-binding-like RAM_03385 IPR000595 Cyclic nucleotide-binding domain RAM_03385 IPR016181 Acyl-CoA N-acyltransferase RAM_03385 IPR014710 RmlC-like jelly roll fold RAM_03435 IPR006032 Ribosomal protein S12/S23 RAM_03435 IPR012340 Nucleic acid-binding, OB-fold RAM_03435 IPR005679 Ribosomal protein S12, bacterial-type RAM_03440 IPR005717 Ribosomal protein S7, bacterial/organellar-type RAM_03440 IPR036823 Ribosomal protein S7 domain superfamily RAM_03440 IPR020606 Ribosomal protein S7, conserved site RAM_03440 IPR000235 Ribosomal protein S5/S7 RAM_03440 IPR023798 Ribosomal protein S7 domain RAM_03445 IPR009000 Translation protein, beta-barrel domain superfamily RAM_03445 IPR000795 Transcription factor, GTP-binding domain RAM_03445 IPR005225 Small GTP-binding protein domain RAM_03445 IPR035647 EF-G domain III/V-like RAM_03445 IPR035649 EFG, domain V RAM_03445 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_03445 IPR000640 Elongation factor EFG, domain V-like RAM_03445 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_03445 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_03445 IPR031157 Tr-type G domain, conserved site RAM_03445 IPR004161 Translation elongation factor EFTu-like, domain 2 RAM_03445 IPR041095 Elongation Factor G, domain II RAM_03445 IPR009022 Elongation factor G, domain III RAM_03445 IPR005517 Translation elongation factor EFG/EF2, domain IV RAM_03445 IPR004540 Translation elongation factor EFG/EF2 RAM_03450 IPR031157 Tr-type G domain, conserved site RAM_03450 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_03450 IPR005225 Small GTP-binding protein domain RAM_03450 IPR000795 Transcription factor, GTP-binding domain RAM_03450 IPR033720 Elongation factor Tu, domain 2 RAM_03450 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain RAM_03450 IPR004161 Translation elongation factor EFTu-like, domain 2 RAM_03450 IPR009000 Translation protein, beta-barrel domain superfamily RAM_03450 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RAM_03450 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RAM_03450 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RAM_03455 IPR018268 Ribosomal protein S10, conserved site RAM_03455 IPR027486 Ribosomal protein S10 domain RAM_03455 IPR036838 Ribosomal protein S10 domain superfamily RAM_03455 IPR001848 Ribosomal protein S10 RAM_03460 IPR019926 Ribosomal protein L3, conserved site RAM_03460 IPR009000 Translation protein, beta-barrel domain superfamily RAM_03460 IPR000597 Ribosomal protein L3 RAM_03460 IPR019927 Ribosomal protein L3, bacterial/organelle-type RAM_03465 IPR002136 Ribosomal protein L4/L1e RAM_03465 IPR023574 Ribosomal protein L4 domain superfamily RAM_03465 IPR013005 50S ribosomal protein uL4 RAM_03470 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily RAM_03470 IPR001014 Ribosomal protein L23/L25, conserved site RAM_03470 IPR013025 Ribosomal protein L25/L23 RAM_03470 IPR012678 Ribosomal protein L23/L15e core domain superfamily RAM_03475 IPR022669 Ribosomal protein L2, C-terminal RAM_03475 IPR008991 Translation protein SH3-like domain superfamily RAM_03475 IPR002171 Ribosomal protein L2 RAM_03475 IPR014722 Ribosomal protein L2, domain 2 RAM_03475 IPR022666 Ribosomal Proteins L2, RNA binding domain RAM_03475 IPR012340 Nucleic acid-binding, OB-fold RAM_03475 IPR014726 Ribosomal protein L2, domain 3 RAM_03475 IPR022671 Ribosomal protein L2, conserved site RAM_03475 IPR005880 Ribosomal protein L2, bacterial/organellar-type RAM_03480 IPR002222 Ribosomal protein S19/S15 RAM_03480 IPR020934 Ribosomal protein S19 conserved site RAM_03480 IPR023575 Ribosomal protein S19, superfamily RAM_03480 IPR005732 Ribosomal protein S19, bacterial-type RAM_03485 IPR001063 Ribosomal protein L22/L17 RAM_03485 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type RAM_03485 IPR018260 Ribosomal protein L22/L17, conserved site RAM_03485 IPR036394 Ribosomal protein L22/L17 superfamily RAM_03490 IPR009019 K homology domain superfamily, prokaryotic type RAM_03490 IPR004044 K Homology domain, type 2 RAM_03490 IPR018280 Ribosomal protein S3, conserved site RAM_03490 IPR036419 Ribosomal protein S3, C-terminal domain superfamily RAM_03490 IPR015946 K homology domain-like, alpha/beta RAM_03490 IPR001351 Ribosomal protein S3, C-terminal RAM_03490 IPR005704 Ribosomal protein S3, bacterial-type RAM_03490 IPR004087 K Homology domain RAM_03495 IPR016180 Ribosomal protein L10e/L16 RAM_03495 IPR036920 Ribosomal protein L10e/L16 superfamily RAM_03495 IPR000114 Ribosomal protein L16 RAM_03495 IPR020798 Ribosomal protein L16, conserved site RAM_03500 IPR018254 Ribosomal protein L29, conserved site RAM_03500 IPR036049 Ribosomal protein L29/L35 superfamily RAM_03500 IPR001854 Ribosomal protein L29/L35 RAM_03505 IPR019979 Ribosomal protein S17, conserved site RAM_03505 IPR000266 Ribosomal protein S17/S11 RAM_03505 IPR019984 30S ribosomal protein S17 RAM_03505 IPR012340 Nucleic acid-binding, OB-fold RAM_03510 IPR019972 Ribosomal protein L14P, conserved site RAM_03510 IPR005745 Ribosomal protein L14P, bacterial-type RAM_03510 IPR036853 Ribosomal protein L14 superfamily RAM_03510 IPR000218 Ribosomal protein L14P RAM_03515 IPR003256 Ribosomal protein L24 RAM_03515 IPR008991 Translation protein SH3-like domain superfamily RAM_03515 IPR014722 Ribosomal protein L2, domain 2 RAM_03515 IPR041988 Ribosomal Protein L26/L24, KOW domain RAM_03515 IPR005825 Ribosomal protein L24/L26, conserved site RAM_03515 IPR005824 KOW RAM_03520 IPR031310 Ribosomal protein L5, N-terminal RAM_03520 IPR022803 Ribosomal protein L5 domain superfamily RAM_03520 IPR031309 Ribosomal protein L5, C-terminal RAM_03520 IPR002132 Ribosomal protein L5 RAM_03520 IPR020930 Ribosomal protein L5, bacterial-type RAM_03525 IPR001209 Ribosomal protein S14 RAM_03525 IPR018271 Ribosomal protein S14, conserved site RAM_03525 IPR023053 Ribosomal protein S14, type Z RAM_03530 IPR035987 Ribosomal protein S8 superfamily RAM_03530 IPR000630 Ribosomal protein S8 RAM_03535 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily RAM_03535 IPR019906 Ribosomal protein L6, bacterial-type RAM_03535 IPR002358 Ribosomal protein L6, conserved site RAM_03535 IPR000702 Ribosomal protein L6 RAM_03535 IPR020040 Ribosomal protein L6, alpha-beta domain RAM_03540 IPR005484 Ribosomal protein L18 RAM_03540 IPR004389 Ribosomal protein L18, bacterial-type RAM_03545 IPR013810 Ribosomal protein S5, N-terminal RAM_03545 IPR005712 Ribosomal protein S5, bacterial-type RAM_03545 IPR005324 Ribosomal protein S5, C-terminal RAM_03545 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_03545 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_03545 IPR000851 Ribosomal protein S5 RAM_03545 IPR018192 Ribosomal protein S5, N-terminal, conserved site RAM_03550 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily RAM_03550 IPR005996 Ribosomal protein L30, bacterial-type RAM_03550 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RAM_03550 IPR018038 Ribosomal protein L30, conserved site RAM_03555 IPR005749 Ribosomal protein L15, bacterial-type RAM_03555 IPR001196 Ribosomal protein L15, conserved site RAM_03555 IPR036227 Ribosomal L18e/L15P superfamily RAM_03555 IPR030878 Ribosomal protein L15 RAM_03555 IPR021131 Ribosomal protein L18e/L15P RAM_03565 IPR001123 Amino acid exporter protein, LeuE-type RAM_03570 IPR023201 SecY domain superfamily RAM_03570 IPR030659 SecY conserved site RAM_03570 IPR002208 SecY/SEC61-alpha family RAM_03570 IPR026593 Protein translocase subunit SecY RAM_03575 IPR000850 Adenylate kinase/UMP-CMP kinase RAM_03575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_03575 IPR033690 Adenylate kinase, conserved site RAM_03580 IPR000994 Peptidase M24 RAM_03580 IPR001714 Peptidase M24, methionine aminopeptidase RAM_03580 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RAM_03580 IPR036005 Creatinase/aminopeptidase-like RAM_03585 IPR012340 Nucleic acid-binding, OB-fold RAM_03585 IPR006196 RNA-binding domain, S1, IF1 type RAM_03585 IPR004368 Translation initiation factor IF-1 RAM_03590 IPR000473 Ribosomal protein L36 RAM_03590 IPR035977 Ribosomal protein L36 superfamily RAM_03595 IPR001892 Ribosomal protein S13 RAM_03595 IPR010979 Ribosomal protein S13-like, H2TH RAM_03595 IPR019980 Ribosomal protein S13, bacterial-type RAM_03595 IPR027437 30s ribosomal protein S13, C-terminal RAM_03595 IPR018269 Ribosomal protein S13, conserved site RAM_03605 IPR001971 Ribosomal protein S11 RAM_03605 IPR018102 Ribosomal S11, conserved site RAM_03605 IPR019981 Ribosomal protein S11, bacterial-type RAM_03605 IPR036967 Ribosomal protein S11 superfamily RAM_03610 IPR001912 Ribosomal protein S4/S9, N-terminal RAM_03610 IPR036986 RNA-binding S4 domain superfamily RAM_03610 IPR002942 RNA-binding S4 domain RAM_03610 IPR022801 Ribosomal protein S4/S9 RAM_03610 IPR005709 Ribosomal protein S4, bacterial-type RAM_03610 IPR018079 Ribosomal protein S4, conserved site RAM_03615 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type RAM_03615 IPR011262 DNA-directed RNA polymerase, insert domain RAM_03615 IPR011773 DNA-directed RNA polymerase, alpha subunit RAM_03615 IPR036643 DNA-directed RNA polymerase, insert domain superfamily RAM_03615 IPR011260 RNA polymerase, alpha subunit, C-terminal RAM_03615 IPR036603 RNA polymerase, RBP11-like subunit RAM_03620 IPR000456 Ribosomal protein L17 RAM_03620 IPR036373 Ribosomal protein L17 superfamily RAM_03625 IPR020103 Pseudouridine synthase, catalytic domain superfamily RAM_03625 IPR001406 Pseudouridine synthase I, TruA RAM_03625 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain RAM_03625 IPR020095 Pseudouridine synthase I, TruA, C-terminal RAM_03645 IPR007795 Type VII secretion system EccB RAM_03660 IPR000209 Peptidase S8/S53 domain RAM_03660 IPR015500 Peptidase S8, subtilisin-related RAM_03660 IPR023827 Peptidase S8, subtilisin, Asp-active site RAM_03660 IPR036852 Peptidase S8/S53 domain superfamily RAM_03660 IPR023834 Type VII secretion system peptidase S8A, mycosin RAM_03670 IPR023837 EccCb-like, Actinobacteria RAM_03670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_03670 IPR002543 FtsK domain RAM_03670 IPR023836 EccCa-like, Actinobacteria RAM_03670 IPR003593 AAA+ ATPase domain RAM_03675 IPR012725 Chaperone DnaK RAM_03675 IPR018181 Heat shock protein 70, conserved site RAM_03675 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RAM_03675 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily RAM_03675 IPR013126 Heat shock protein 70 family RAM_03695 IPR025637 Domain of unknown function DUF4333 RAM_03705 IPR036899 Ribosomal protein L13 superfamily RAM_03705 IPR023563 Ribosomal protein L13, conserved site RAM_03705 IPR005823 Ribosomal protein L13, bacterial-type RAM_03705 IPR005822 Ribosomal protein L13 RAM_03710 IPR023035 Ribosomal protein S9, bacterial/plastid RAM_03710 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_03710 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_03710 IPR000754 Ribosomal protein S9 RAM_03710 IPR020574 Ribosomal protein S9, conserved site RAM_03715 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RAM_03715 IPR005841 Alpha-D-phosphohexomutase superfamily RAM_03715 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RAM_03715 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RAM_03715 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RAM_03715 IPR006352 Phosphoglucosamine mutase, bacterial type RAM_03715 IPR016066 Alpha-D-phosphohexomutase, conserved site RAM_03715 IPR005843 Alpha-D-phosphohexomutase, C-terminal RAM_03715 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RAM_03725 IPR042099 AMP-dependent synthetase-like superfamily RAM_03725 IPR000873 AMP-dependent synthetase/ligase RAM_03755 IPR035490 GlmS/FrlB, SIS domain 2 RAM_03755 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising RAM_03755 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_03755 IPR001347 Sugar isomerase (SIS) RAM_03755 IPR035466 GlmS/AgaS, SIS domain 1 RAM_03755 IPR017932 Glutamine amidotransferase type 2 domain RAM_03760 IPR004443 YjeF N-terminal domain RAM_03760 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr RAM_03760 IPR029056 Ribokinase-like RAM_03760 IPR017953 Carbohydrate kinase, predicted, conserved site RAM_03760 IPR036652 YjeF N-terminal domain superfamily RAM_03760 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase RAM_03765 IPR001034 DeoR-type HTH domain RAM_03765 IPR036390 Winged helix DNA-binding domain superfamily RAM_03765 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_03765 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RAM_03765 IPR037171 NagB/RpiA transferase-like RAM_03765 IPR014036 DeoR C-terminal sensor domain RAM_03770 IPR006000 Xylulokinase RAM_03770 IPR018484 Carbohydrate kinase, FGGY, N-terminal RAM_03770 IPR018483 Carbohydrate kinase, FGGY, conserved site RAM_03770 IPR018485 Carbohydrate kinase, FGGY, C-terminal RAM_03770 IPR000577 Carbohydrate kinase, FGGY RAM_03775 IPR008995 Molybdate/tungstate binding, C-terminal RAM_03775 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_03775 IPR013611 Transport-associated OB, type 2 RAM_03775 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC RAM_03775 IPR003593 AAA+ ATPase domain RAM_03775 IPR003439 ABC transporter-like RAM_03775 IPR017871 ABC transporter, conserved site RAM_03780 IPR001608 Alanine racemase, N-terminal RAM_03780 IPR011079 Alanine racemase, C-terminal RAM_03780 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RAM_03780 IPR000821 Alanine racemase RAM_03780 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RAM_03780 IPR029066 PLP-binding barrel RAM_03785 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RAM_03785 IPR000073 Alpha/beta hydrolase fold-1 RAM_03785 IPR000089 Biotin/lipoyl attachment RAM_03785 IPR029058 Alpha/Beta hydrolase fold RAM_03785 IPR011053 Single hybrid motif RAM_03790 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_03790 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE RAM_03800 IPR001095 Acetyl-CoA carboxylase, alpha subunit RAM_03800 IPR041010 Acetyl-coA carboxylase zinc finger domain RAM_03800 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RAM_03800 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RAM_03800 IPR029045 ClpP/crotonase-like domain superfamily RAM_03800 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RAM_03800 IPR034733 Acetyl-CoA carboxylase RAM_03805 IPR025110 AMP-binding enzyme, C-terminal domain RAM_03805 IPR020459 AMP-binding RAM_03805 IPR042099 AMP-dependent synthetase-like superfamily RAM_03805 IPR000873 AMP-dependent synthetase/ligase RAM_03805 IPR020845 AMP-binding, conserved site RAM_03810 IPR000905 Gcp-like domain RAM_03810 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB RAM_03815 IPR016181 Acyl-CoA N-acyltransferase RAM_03815 IPR000182 GNAT domain RAM_03815 IPR006464 N-acetyltransferase RimI/Ard1 RAM_03820 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD RAM_03820 IPR017860 Peptidase M22, conserved site RAM_03820 IPR017861 Kae1/TsaD family RAM_03820 IPR000905 Gcp-like domain RAM_03825 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain RAM_03825 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like RAM_03845 IPR029044 Nucleotide-diphospho-sugar transferases RAM_03855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_03855 IPR025714 Methyltransferase domain RAM_03855 IPR026669 Arsenite methyltransferase-like RAM_03860 IPR001845 HTH ArsR-type DNA-binding domain RAM_03860 IPR036390 Winged helix DNA-binding domain superfamily RAM_03860 IPR011991 ArsR-like helix-turn-helix domain RAM_03860 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_03865 IPR023485 Phosphotyrosine protein phosphatase I RAM_03865 IPR036196 Phosphotyrosine protein phosphatase I superfamily RAM_03870 IPR004706 Arsenical-resistance protein Acr3 RAM_03870 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 RAM_03870 IPR038770 Sodium/solute symporter superfamily RAM_03875 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_03875 IPR001845 HTH ArsR-type DNA-binding domain RAM_03875 IPR011991 ArsR-like helix-turn-helix domain RAM_03875 IPR036390 Winged helix DNA-binding domain superfamily RAM_03880 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RAM_03880 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RAM_03880 IPR037523 Vicinal oxygen chelate (VOC) domain RAM_03885 IPR011032 GroES-like superfamily RAM_03885 IPR018369 Chaperonin GroES, conserved site RAM_03885 IPR037124 GroES chaperonin superfamily RAM_03885 IPR020818 GroES chaperonin family RAM_03890 IPR002423 Chaperonin Cpn60/TCP-1 family RAM_03890 IPR027413 GroEL-like equatorial domain superfamily RAM_03890 IPR018370 Chaperonin Cpn60, conserved site RAM_03890 IPR001844 Chaperonin Cpn60 RAM_03890 IPR027409 GroEL-like apical domain superfamily RAM_03890 IPR027410 TCP-1-like chaperonin intermediate domain superfamily RAM_03895 IPR034768 WhiB-like iron-sulfur binding domain RAM_03895 IPR003482 Transcription factor WhiB RAM_03910 IPR000792 Transcription regulator LuxR, C-terminal RAM_03910 IPR001789 Signal transduction response regulator, receiver domain RAM_03910 IPR011006 CheY-like superfamily RAM_03910 IPR016032 Signal transduction response regulator, C-terminal effector RAM_03925 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_03925 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_03925 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_03925 IPR007627 RNA polymerase sigma-70 region 2 RAM_03925 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_03925 IPR014284 RNA polymerase sigma-70 like domain RAM_03925 IPR039425 RNA polymerase sigma-70 like RAM_03925 IPR013325 RNA polymerase sigma factor, region 2 RAM_03935 IPR035165 Protein of unknown function DUF5319 RAM_03940 IPR013785 Aldolase-type TIM barrel RAM_03940 IPR000644 CBS domain RAM_03940 IPR001093 IMP dehydrogenase/GMP reductase RAM_03940 IPR005990 Inosine-5'-monophosphate dehydrogenase RAM_03940 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RAM_03950 IPR005992 IMP dehydrogenase-related 2 RAM_03950 IPR013785 Aldolase-type TIM barrel RAM_03950 IPR001093 IMP dehydrogenase/GMP reductase RAM_03960 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_03960 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RAM_03970 IPR016167 FAD-binding, type PCMH, subdomain 1 RAM_03970 IPR016166 FAD-binding domain, PCMH-type RAM_03970 IPR006094 FAD linked oxidase, N-terminal RAM_03970 IPR012951 Berberine/berberine-like RAM_03970 IPR036318 FAD-binding, type PCMH-like superfamily RAM_03975 IPR017656 Putative phosphonoacetaldehyde dehydrogenase RAM_03975 IPR015590 Aldehyde dehydrogenase domain RAM_03975 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_03975 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_03975 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_03975 IPR016161 Aldehyde/histidinol dehydrogenase RAM_03980 IPR036291 NAD(P)-binding domain superfamily RAM_03980 IPR011032 GroES-like superfamily RAM_03980 IPR013154 Alcohol dehydrogenase, N-terminal RAM_03980 IPR027399 Alcohol dehydrogenase GroES-associated RAM_03980 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_03980 IPR013149 Alcohol dehydrogenase, C-terminal RAM_03995 IPR004739 GMP synthase, glutamine amidotransferase RAM_03995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_03995 IPR022310 NAD/GMP synthase RAM_03995 IPR025777 GMP synthetase ATP pyrophosphatase domain RAM_03995 IPR029062 Class I glutamine amidotransferase-like RAM_03995 IPR017926 Glutamine amidotransferase RAM_03995 IPR001674 GMP synthase, C-terminal RAM_03995 IPR022955 GMP synthase RAM_04010 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_04010 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_04010 IPR036291 NAD(P)-binding domain superfamily RAM_04025 IPR011006 CheY-like superfamily RAM_04025 IPR016032 Signal transduction response regulator, C-terminal effector RAM_04025 IPR001789 Signal transduction response regulator, receiver domain RAM_04025 IPR000792 Transcription regulator LuxR, C-terminal RAM_04030 IPR000620 EamA domain RAM_04030 IPR004779 Carboxylate/Amino Acid/Amine Transporter RAM_04035 IPR005119 LysR, substrate-binding RAM_04035 IPR000847 Transcription regulator HTH, LysR RAM_04035 IPR036390 Winged helix DNA-binding domain superfamily RAM_04035 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_04040 IPR017441 Protein kinase, ATP binding site RAM_04040 IPR016236 Serine/threonine-protein kinase PknK, predicted RAM_04040 IPR041664 Orc1-like, AAA ATPase domain RAM_04040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_04040 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_04040 IPR000719 Protein kinase domain RAM_04040 IPR011009 Protein kinase-like domain superfamily RAM_04045 IPR011009 Protein kinase-like domain superfamily RAM_04045 IPR005543 PASTA domain RAM_04045 IPR000719 Protein kinase domain RAM_04045 IPR017441 Protein kinase, ATP binding site RAM_04045 IPR008271 Serine/threonine-protein kinase, active site RAM_04065 IPR036263 Chorismate mutase type II superfamily RAM_04065 IPR010958 Chorismate mutase, high GC Gram-positive bacteria/archaeal RAM_04065 IPR002701 Chorismate mutase II, prokaryotic-type RAM_04065 IPR036979 Chorismate mutase domain superfamily RAM_04075 IPR005751 ATP-dependent DNA helicase PcrA RAM_04075 IPR013986 DExx box DNA helicase domain superfamily RAM_04075 IPR014017 UvrD-like DNA helicase, C-terminal RAM_04075 IPR000212 DNA helicase, UvrD/REP type RAM_04075 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_04075 IPR014016 UvrD-like helicase, ATP-binding domain RAM_04075 IPR034739 UvrD/AddA helicase, N-terminal RAM_04085 IPR011055 Duplicated hybrid motif RAM_04085 IPR016047 Peptidase M23 RAM_04085 IPR036779 LysM domain superfamily RAM_04085 IPR018392 LysM domain RAM_04100 IPR016102 Succinyl-CoA synthetase-like RAM_04100 IPR011761 ATP-grasp fold RAM_04100 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RAM_04100 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RAM_04100 IPR013815 ATP-grasp fold, subdomain 1 RAM_04100 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RAM_04100 IPR005809 Succinate--CoA synthetase, beta subunit RAM_04105 IPR003781 CoA-binding RAM_04105 IPR005810 Succinyl-CoA ligase, alpha subunit RAM_04105 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RAM_04105 IPR036291 NAD(P)-binding domain superfamily RAM_04105 IPR016102 Succinyl-CoA synthetase-like RAM_04105 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site RAM_04105 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RAM_04120 IPR036477 Formyl transferase, N-terminal domain superfamily RAM_04120 IPR004607 Phosphoribosylglycinamide formyltransferase RAM_04120 IPR002376 Formyl transferase, N-terminal RAM_04125 IPR002695 Bifunctional purine biosynthesis protein PurH-like RAM_04125 IPR016193 Cytidine deaminase-like RAM_04125 IPR011607 Methylglyoxal synthase-like domain RAM_04125 IPR036914 Methylglyoxal synthase-like domain superfamily RAM_04125 IPR024051 AICAR transformylase, duplicated domain superfamily RAM_04165 IPR029460 DNA polymerase, helix-hairpin-helix motif RAM_04165 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RAM_04165 IPR004013 PHP domain RAM_04165 IPR003141 Polymerase/histidinol phosphatase, N-terminal RAM_04165 IPR016195 Polymerase/histidinol phosphatase-like RAM_04165 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain RAM_04165 IPR004805 DNA polymerase III, alpha subunit RAM_04165 IPR023073 DNA polymerase, error-prone RAM_04165 IPR040982 DNA polymerase III alpha subunit finger domain RAM_04185 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RAM_04185 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RAM_04185 IPR036291 NAD(P)-binding domain superfamily RAM_04185 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RAM_04195 IPR011701 Major facilitator superfamily RAM_04195 IPR020846 Major facilitator superfamily domain RAM_04195 IPR036259 MFS transporter superfamily RAM_04200 IPR011991 ArsR-like helix-turn-helix domain RAM_04200 IPR001845 HTH ArsR-type DNA-binding domain RAM_04200 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_04200 IPR036390 Winged helix DNA-binding domain superfamily RAM_04205 IPR020846 Major facilitator superfamily domain RAM_04205 IPR036259 MFS transporter superfamily RAM_04205 IPR011701 Major facilitator superfamily RAM_04215 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal RAM_04215 IPR001537 tRNA/rRNA methyltransferase, SpoU type RAM_04215 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase RAM_04215 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RAM_04215 IPR029028 Alpha/beta knot methyltransferases RAM_04240 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC RAM_04240 IPR013216 Methyltransferase type 11 RAM_04240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_04255 IPR024084 Isopropylmalate dehydrogenase-like domain RAM_04255 IPR004790 Isocitrate dehydrogenase NADP-dependent RAM_04255 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RAM_04275 IPR001279 Metallo-beta-lactamase RAM_04275 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_04290 IPR002306 Tryptophan-tRNA ligase RAM_04290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_04290 IPR024109 Tryptophan-tRNA ligase, bacterial-type RAM_04290 IPR002305 Aminoacyl-tRNA synthetase, class Ic RAM_04290 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RAM_04295 IPR011009 Protein kinase-like domain superfamily RAM_04295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_04300 IPR017039 Virulence factor BrkB RAM_04300 IPR005274 Inner membrane protein YhjD RAM_04310 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_04310 IPR036390 Winged helix DNA-binding domain superfamily RAM_04310 IPR011991 ArsR-like helix-turn-helix domain RAM_04310 IPR002577 Helix-turn-helix, HxlR type RAM_04325 IPR015500 Peptidase S8, subtilisin-related RAM_04325 IPR023828 Peptidase S8, subtilisin, Ser-active site RAM_04325 IPR022398 Peptidase S8, subtilisin, His-active site RAM_04325 IPR023827 Peptidase S8, subtilisin, Asp-active site RAM_04325 IPR036852 Peptidase S8/S53 domain superfamily RAM_04325 IPR000209 Peptidase S8/S53 domain RAM_04325 IPR034202 Subtilisin Carlsberg-like catalytic domain RAM_04335 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_04335 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_04335 IPR012675 Beta-grasp domain superfamily RAM_04335 IPR009051 Alpha-helical ferredoxin RAM_04335 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RAM_04335 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RAM_04335 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_04335 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_04340 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RAM_04340 IPR011281 Succinate dehydrogenase, flavoprotein subunit RAM_04340 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily RAM_04340 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RAM_04340 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RAM_04340 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RAM_04340 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RAM_04340 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_04350 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit RAM_04350 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit RAM_04350 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit RAM_04350 IPR039023 Succinate dehydrogenase membrane subunit SdhC, prokaryotes RAM_04355 IPR017853 Glycoside hydrolase superfamily RAM_04355 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_04355 IPR013780 Glycosyl hydrolase, all-beta RAM_04355 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain RAM_04355 IPR013785 Aldolase-type TIM barrel RAM_04355 IPR002241 Glycoside hydrolase, family 27 RAM_04360 IPR029486 Glycosyl-hydrolase 97, N-terminal domain RAM_04360 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain RAM_04360 IPR017853 Glycoside hydrolase superfamily RAM_04360 IPR019563 Glycosyl-hydrolase 97, catalytic domain RAM_04360 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_04360 IPR013785 Aldolase-type TIM barrel RAM_04360 IPR013780 Glycosyl hydrolase, all-beta RAM_04385 IPR016193 Cytidine deaminase-like RAM_04385 IPR002125 Cytidine and deoxycytidylate deaminase domain RAM_04390 IPR017459 Glycosyl transferase family 3, N-terminal domain RAM_04390 IPR000312 Glycosyl transferase, family 3 RAM_04390 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily RAM_04390 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily RAM_04390 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal RAM_04390 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic RAM_04390 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site RAM_04390 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily RAM_04390 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase RAM_04400 IPR032466 Metal-dependent hydrolase RAM_04400 IPR006330 Adenosine/adenine deaminase RAM_04400 IPR028893 Adenosine deaminase RAM_04400 IPR001365 Adenosine/AMP deaminase domain RAM_04405 IPR036259 MFS transporter superfamily RAM_04405 IPR020846 Major facilitator superfamily domain RAM_04405 IPR011701 Major facilitator superfamily RAM_04415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_04415 IPR001650 Helicase, C-terminal RAM_04415 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_04415 IPR011545 DEAD/DEAH box helicase domain RAM_04415 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal RAM_04430 IPR036390 Winged helix DNA-binding domain superfamily RAM_04430 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_04430 IPR002577 Helix-turn-helix, HxlR type RAM_04440 IPR013149 Alcohol dehydrogenase, C-terminal RAM_04440 IPR020843 Polyketide synthase, enoylreductase domain RAM_04440 IPR013154 Alcohol dehydrogenase, N-terminal RAM_04440 IPR036291 NAD(P)-binding domain superfamily RAM_04440 IPR011032 GroES-like superfamily RAM_04440 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_04450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_04450 IPR035906 MetI-like superfamily RAM_04455 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_04455 IPR035906 MetI-like superfamily RAM_04460 IPR020802 Polyketide synthase, thioesterase domain RAM_04460 IPR001031 Thioesterase RAM_04460 IPR029058 Alpha/Beta hydrolase fold RAM_04460 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS RAM_04460 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_04465 IPR036396 Cytochrome P450 superfamily RAM_04465 IPR002397 Cytochrome P450, B-class RAM_04465 IPR001128 Cytochrome P450 RAM_04465 IPR017972 Cytochrome P450, conserved site RAM_04470 IPR017972 Cytochrome P450, conserved site RAM_04470 IPR036396 Cytochrome P450 superfamily RAM_04470 IPR002397 Cytochrome P450, B-class RAM_04470 IPR001128 Cytochrome P450 RAM_04490 IPR016160 Aldehyde dehydrogenase, cysteine active site RAM_04490 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_04490 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_04490 IPR015590 Aldehyde dehydrogenase domain RAM_04490 IPR016161 Aldehyde/histidinol dehydrogenase RAM_04490 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_04495 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RAM_04495 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_04495 IPR015590 Aldehyde dehydrogenase domain RAM_04495 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_04495 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_04495 IPR016161 Aldehyde/histidinol dehydrogenase RAM_04500 IPR013785 Aldolase-type TIM barrel RAM_04500 IPR011343 Deoxyribose-phosphate aldolase RAM_04500 IPR002915 DeoC/FbaB/ lacD aldolase RAM_04500 IPR023649 Deoxyribose-phosphate aldolase type II RAM_04515 IPR005765 Uracil phosphoribosyl transferase RAM_04515 IPR000836 Phosphoribosyltransferase domain RAM_04515 IPR034332 Uracil phosphoribosyltransferase, bacterial-type RAM_04515 IPR029057 Phosphoribosyltransferase-like RAM_04525 IPR013325 RNA polymerase sigma factor, region 2 RAM_04525 IPR007630 RNA polymerase sigma-70 region 4 RAM_04525 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_04525 IPR039425 RNA polymerase sigma-70 like RAM_04525 IPR014284 RNA polymerase sigma-70 like domain RAM_04525 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_04525 IPR007627 RNA polymerase sigma-70 region 2 RAM_04525 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_04540 IPR000551 MerR-type HTH domain RAM_04540 IPR010211 Redox-sensitive transcriptional activator SoxR RAM_04540 IPR015358 Transcription regulator MerR, DNA binding RAM_04540 IPR009061 Putative DNA-binding domain superfamily RAM_04545 IPR020471 Aldo/keto reductase RAM_04545 IPR023210 NADP-dependent oxidoreductase domain RAM_04545 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_04555 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RAM_04555 IPR037396 FMN hydroxy acid dehydrogenase domain RAM_04555 IPR000262 FMN-dependent dehydrogenase RAM_04555 IPR013785 Aldolase-type TIM barrel RAM_04555 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RAM_04565 IPR038770 Sodium/solute symporter superfamily RAM_04565 IPR006153 Cation/H+ exchanger RAM_04570 IPR011006 CheY-like superfamily RAM_04570 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_04570 IPR039420 Transcriptional regulatory protein WalR-like RAM_04570 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_04570 IPR001789 Signal transduction response regulator, receiver domain RAM_04575 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_04575 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_04575 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_04575 IPR003594 Histidine kinase/HSP90-like ATPase RAM_04575 IPR003660 HAMP domain RAM_04575 IPR005467 Histidine kinase domain RAM_04575 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_04585 IPR033656 Histidyl-anticodon-binding RAM_04585 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_04585 IPR004154 Anticodon-binding RAM_04585 IPR036621 Anticodon-binding domain superfamily RAM_04585 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RAM_04585 IPR015807 Histidine-tRNA ligase RAM_04585 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain RAM_04595 IPR032466 Metal-dependent hydrolase RAM_04595 IPR006680 Amidohydrolase-related RAM_04595 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_04595 IPR023512 Deaminase MtaD/DadD RAM_04620 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RAM_04620 IPR005843 Alpha-D-phosphohexomutase, C-terminal RAM_04620 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RAM_04620 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RAM_04620 IPR005841 Alpha-D-phosphohexomutase superfamily RAM_04620 IPR016066 Alpha-D-phosphohexomutase, conserved site RAM_04620 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RAM_04620 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RAM_04630 IPR000845 Nucleoside phosphorylase domain RAM_04630 IPR018099 Purine phosphorylase, family 2, conserved site RAM_04630 IPR011268 Purine nucleoside phosphorylase RAM_04630 IPR011269 Putative purine nucleotide phosphorylase RAM_04630 IPR035994 Nucleoside phosphorylase superfamily RAM_04650 IPR008271 Serine/threonine-protein kinase, active site RAM_04650 IPR000719 Protein kinase domain RAM_04650 IPR011009 Protein kinase-like domain superfamily RAM_04655 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic RAM_04655 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic RAM_04655 IPR004608 Methylmalonyl-CoA mutase, beta chain RAM_04660 IPR006159 Methylmalonyl-CoA mutase, C-terminal RAM_04660 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic RAM_04660 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic RAM_04660 IPR006158 Cobalamin (vitamin B12)-binding domain RAM_04660 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic RAM_04660 IPR036724 Cobalamin-binding domain superfamily RAM_04665 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB RAM_04665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_04675 IPR002933 Peptidase M20 RAM_04675 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_04675 IPR017439 Amidohydrolase RAM_04675 IPR036264 Bacterial exopeptidase dimerisation domain RAM_04675 IPR011793 Putative glutamate--cysteine ligase YbdK RAM_04675 IPR006336 Glutamate--cysteine ligase, GCS2 RAM_04690 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_04690 IPR023753 FAD/NAD(P)-binding domain RAM_04690 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RAM_04690 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RAM_04690 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_04710 IPR037523 Vicinal oxygen chelate (VOC) domain RAM_04710 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RAM_04710 IPR041581 Glyoxalase-like domain, group 6 RAM_04710 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RAM_04715 IPR018485 Carbohydrate kinase, FGGY, C-terminal RAM_04715 IPR018484 Carbohydrate kinase, FGGY, N-terminal RAM_04715 IPR018483 Carbohydrate kinase, FGGY, conserved site RAM_04715 IPR005999 Glycerol kinase RAM_04715 IPR000577 Carbohydrate kinase, FGGY RAM_04720 IPR022357 Major intrinsic protein, conserved site RAM_04720 IPR000425 Major intrinsic protein RAM_04720 IPR023271 Aquaporin-like RAM_04725 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase RAM_04725 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_04725 IPR006076 FAD dependent oxidoreductase RAM_04725 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily RAM_04725 IPR031656 Alpha-glycerophosphate oxidase, C-terminal RAM_04760 IPR011053 Single hybrid motif RAM_04760 IPR005481 Biotin carboxylase-like, N-terminal domain RAM_04760 IPR001882 Biotin-binding site RAM_04760 IPR011764 Biotin carboxylation domain RAM_04760 IPR005482 Biotin carboxylase, C-terminal RAM_04760 IPR011761 ATP-grasp fold RAM_04760 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RAM_04760 IPR016185 Pre-ATP-grasp domain superfamily RAM_04760 IPR011054 Rudiment single hybrid motif RAM_04760 IPR000089 Biotin/lipoyl attachment RAM_04775 IPR023954 C4-dicarboxylate transport protein RAM_04775 IPR001991 Sodium:dicarboxylate symporter RAM_04775 IPR018107 Sodium:dicarboxylate symporter, conserved site RAM_04775 IPR036458 Sodium:dicarboxylate symporter superfamily RAM_04780 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein RAM_04780 IPR029001 Inosine triphosphate pyrophosphatase-like RAM_04785 IPR013783 Immunoglobulin-like fold RAM_04785 IPR017853 Glycoside hydrolase superfamily RAM_04785 IPR026891 Fibronectin type III-like domain RAM_04785 IPR002772 Glycoside hydrolase family 3 C-terminal domain RAM_04785 IPR019800 Glycoside hydrolase, family 3, active site RAM_04785 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_04785 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily RAM_04785 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_04790 IPR020846 Major facilitator superfamily domain RAM_04790 IPR036259 MFS transporter superfamily RAM_04790 IPR004638 Drug resistance transporter EmrB-like RAM_04790 IPR011701 Major facilitator superfamily RAM_04805 IPR011251 Luciferase-like domain RAM_04805 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related RAM_04805 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase RAM_04805 IPR036661 Luciferase-like domain superfamily RAM_04810 IPR036390 Winged helix DNA-binding domain superfamily RAM_04810 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_04810 IPR012712 HTH-type transcriptional regulator HpaR/FarR RAM_04810 IPR000835 MarR-type HTH domain RAM_04810 IPR023187 Transcriptional regulator MarR-type, conserved site RAM_04820 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RAM_04820 IPR029045 ClpP/crotonase-like domain superfamily RAM_04820 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RAM_04820 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RAM_04820 IPR034733 Acetyl-CoA carboxylase RAM_04830 IPR001789 Signal transduction response regulator, receiver domain RAM_04830 IPR016032 Signal transduction response regulator, C-terminal effector RAM_04830 IPR011006 CheY-like superfamily RAM_04830 IPR000792 Transcription regulator LuxR, C-terminal RAM_04835 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_04835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_04855 IPR001647 DNA-binding HTH domain, TetR-type RAM_04855 IPR009057 Homeobox-like domain superfamily RAM_04855 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_04860 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_04860 IPR002938 FAD-binding domain RAM_04865 IPR036390 Winged helix DNA-binding domain superfamily RAM_04865 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_04865 IPR002577 Helix-turn-helix, HxlR type RAM_04875 IPR036291 NAD(P)-binding domain superfamily RAM_04875 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_04875 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_04880 IPR018060 DNA binding HTH domain, AraC-type RAM_04880 IPR018062 HTH domain AraC-type, conserved site RAM_04880 IPR029062 Class I glutamine amidotransferase-like RAM_04880 IPR009057 Homeobox-like domain superfamily RAM_04880 IPR002818 DJ-1/PfpI RAM_04890 IPR005119 LysR, substrate-binding RAM_04890 IPR036390 Winged helix DNA-binding domain superfamily RAM_04890 IPR000847 Transcription regulator HTH, LysR RAM_04890 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_04905 IPR004033 UbiE/COQ5 methyltransferase RAM_04905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_04905 IPR023576 UbiE/COQ5 methyltransferase, conserved site RAM_04915 IPR014284 RNA polymerase sigma-70 like domain RAM_04915 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_04915 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_04915 IPR007627 RNA polymerase sigma-70 region 2 RAM_04915 IPR032710 NTF2-like domain superfamily RAM_04915 IPR013325 RNA polymerase sigma factor, region 2 RAM_04915 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_04920 IPR013785 Aldolase-type TIM barrel RAM_04920 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RAM_04920 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_04920 IPR023753 FAD/NAD(P)-binding domain RAM_04940 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_04940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_04945 IPR011006 CheY-like superfamily RAM_04945 IPR016032 Signal transduction response regulator, C-terminal effector RAM_04945 IPR000792 Transcription regulator LuxR, C-terminal RAM_04945 IPR001789 Signal transduction response regulator, receiver domain RAM_04950 IPR003646 SH3-like domain, bacterial-type RAM_04950 IPR038765 Papain-like cysteine peptidase superfamily RAM_04950 IPR018392 LysM domain RAM_04950 IPR036779 LysM domain superfamily RAM_04950 IPR000064 Endopeptidase, NLPC/P60 domain RAM_04955 IPR003142 Biotin protein ligase, C-terminal RAM_04955 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RAM_04955 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RAM_04965 IPR013785 Aldolase-type TIM barrel RAM_04965 IPR000891 Pyruvate carboxyltransferase RAM_04980 IPR008928 Six-hairpin glycosidase superfamily RAM_04980 IPR005887 Alpha-1,2-mannosidase, putative RAM_04980 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_04980 IPR041371 Glycosyl hydrolase family 92 N-terminal domain RAM_04980 IPR012939 Glycosyl hydrolase family 92 RAM_04985 IPR000760 Inositol monophosphatase-like RAM_04985 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase RAM_04985 IPR020583 Inositol monophosphatase, metal-binding site RAM_04990 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_04990 IPR001789 Signal transduction response regulator, receiver domain RAM_04990 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_04990 IPR011006 CheY-like superfamily RAM_04990 IPR039420 Transcriptional regulatory protein WalR-like RAM_04995 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_04995 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_04995 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_04995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_04995 IPR003594 Histidine kinase/HSP90-like ATPase RAM_04995 IPR003660 HAMP domain RAM_04995 IPR005467 Histidine kinase domain RAM_05000 IPR001789 Signal transduction response regulator, receiver domain RAM_05000 IPR011006 CheY-like superfamily RAM_05000 IPR000792 Transcription regulator LuxR, C-terminal RAM_05000 IPR016032 Signal transduction response regulator, C-terminal effector RAM_05005 IPR016032 Signal transduction response regulator, C-terminal effector RAM_05005 IPR001789 Signal transduction response regulator, receiver domain RAM_05005 IPR011006 CheY-like superfamily RAM_05005 IPR000792 Transcription regulator LuxR, C-terminal RAM_05015 IPR036259 MFS transporter superfamily RAM_05015 IPR005829 Sugar transporter, conserved site RAM_05015 IPR011701 Major facilitator superfamily RAM_05015 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RAM_05015 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_05015 IPR036390 Winged helix DNA-binding domain superfamily RAM_05015 IPR020846 Major facilitator superfamily domain RAM_05040 IPR018584 Glycosyltransferase family 87 RAM_05045 IPR018584 Glycosyltransferase family 87 RAM_05050 IPR013815 ATP-grasp fold, subdomain 1 RAM_05050 IPR011761 ATP-grasp fold RAM_05050 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RAM_05050 IPR016185 Pre-ATP-grasp domain superfamily RAM_05050 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit RAM_05050 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain RAM_05050 IPR011054 Rudiment single hybrid motif RAM_05055 IPR035893 PurE domain superfamily RAM_05055 IPR024694 PurE, prokaryotic type RAM_05055 IPR000031 PurE domain RAM_05055 IPR033747 Class I PurE RAM_05070 IPR042099 AMP-dependent synthetase-like superfamily RAM_05070 IPR000873 AMP-dependent synthetase/ligase RAM_05070 IPR020845 AMP-binding, conserved site RAM_05070 IPR025110 AMP-binding enzyme, C-terminal domain RAM_05075 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_05075 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_05075 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_05075 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_05075 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_05075 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_05075 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_05085 IPR000073 Alpha/beta hydrolase fold-1 RAM_05085 IPR029058 Alpha/Beta hydrolase fold RAM_05115 IPR004474 Cell envelope-related transcriptional attenuator domain RAM_05115 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain RAM_05120 IPR004474 Cell envelope-related transcriptional attenuator domain RAM_05120 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain RAM_05125 IPR005888 dTDP-glucose 4,6-dehydratase RAM_05125 IPR016040 NAD(P)-binding domain RAM_05125 IPR036291 NAD(P)-binding domain superfamily RAM_05125 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_05130 IPR029903 RmlD-like substrate binding domain RAM_05130 IPR036291 NAD(P)-binding domain superfamily RAM_05130 IPR005913 dTDP-4-dehydrorhamnose reductase family RAM_05135 IPR001296 Glycosyl transferase, family 1 RAM_05135 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_05140 IPR029044 Nucleotide-diphospho-sugar transferases RAM_05150 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_05150 IPR001296 Glycosyl transferase, family 1 RAM_05150 IPR017814 Mycothiol biosynthesis protein, MshA RAM_05160 IPR029044 Nucleotide-diphospho-sugar transferases RAM_05170 IPR005835 Nucleotidyl transferase domain RAM_05170 IPR029044 Nucleotide-diphospho-sugar transferases RAM_05185 IPR036390 Winged helix DNA-binding domain superfamily RAM_05185 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_05185 IPR000524 Transcription regulator HTH, GntR RAM_05200 IPR008225 Coenzyme F420:L-glutamate ligase RAM_05200 IPR002847 Coenzyme F420:L-glutamate ligase-like domain RAM_05200 IPR019943 Coenzyme F420 biosynthesis protein FbiB, C-terminal RAM_05200 IPR023661 Coenzyme F420:L-glutamate ligase, Actinobacteria RAM_05200 IPR029479 Nitroreductase RAM_05200 IPR000415 Nitroreductase-like RAM_05220 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_05220 IPR000813 7Fe ferredoxin RAM_05220 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_05225 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ RAM_05225 IPR015424 Pyridoxal phosphate-dependent transferase RAM_05225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_05225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_05225 IPR004839 Aminotransferase, class I/classII RAM_05235 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_05235 IPR002938 FAD-binding domain RAM_05245 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family RAM_05245 IPR011004 Trimeric LpxA-like superfamily RAM_05245 IPR001451 Hexapeptide repeat RAM_05245 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria RAM_05245 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily RAM_05245 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain RAM_05255 IPR011650 Peptidase M20, dimerisation domain RAM_05255 IPR002933 Peptidase M20 RAM_05255 IPR036264 Bacterial exopeptidase dimerisation domain RAM_05255 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE RAM_05255 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RAM_05270 IPR008979 Galactose-binding-like domain superfamily RAM_05270 IPR002884 P domain RAM_05270 IPR007484 Peptidase M28 RAM_05270 IPR041756 Peptidase M28, SGAP-like RAM_05275 IPR041756 Peptidase M28, SGAP-like RAM_05275 IPR013856 Peptidase M4 domain RAM_05275 IPR001570 Peptidase M4, C-terminal RAM_05275 IPR027268 Peptidase M4/M1, CTD superfamily RAM_05275 IPR007484 Peptidase M28 RAM_05280 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_05280 IPR001387 Cro/C1-type helix-turn-helix domain RAM_05285 IPR013856 Peptidase M4 domain RAM_05285 IPR001570 Peptidase M4, C-terminal RAM_05285 IPR027268 Peptidase M4/M1, CTD superfamily RAM_05285 IPR041756 Peptidase M28, SGAP-like RAM_05285 IPR007484 Peptidase M28 RAM_05295 IPR031100 LOG family RAM_05295 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RAM_05300 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RAM_05300 IPR031100 LOG family RAM_05315 IPR029044 Nucleotide-diphospho-sugar transferases RAM_05325 IPR002656 Acyltransferase 3 RAM_05325 IPR036514 SGNH hydrolase superfamily RAM_05340 IPR001173 Glycosyltransferase 2-like RAM_05340 IPR029044 Nucleotide-diphospho-sugar transferases RAM_05345 IPR003439 ABC transporter-like RAM_05345 IPR039421 Type I protein exporter RAM_05345 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_05345 IPR003593 AAA+ ATPase domain RAM_05345 IPR011527 ABC transporter type 1, transmembrane domain RAM_05345 IPR017871 ABC transporter, conserved site RAM_05345 IPR011917 ABC transporter, lipid A export, MsbA RAM_05345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_05350 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD RAM_05350 IPR017871 ABC transporter, conserved site RAM_05350 IPR003439 ABC transporter-like RAM_05350 IPR003593 AAA+ ATPase domain RAM_05350 IPR011527 ABC transporter type 1, transmembrane domain RAM_05350 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_05350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_05350 IPR039421 Type I protein exporter RAM_05355 IPR003317 Cytochrome ubiquinol oxidase subunit 2 RAM_05360 IPR002585 Cytochrome ubiquinol oxidase subunit 1 RAM_05385 IPR011257 DNA glycosylase RAM_05385 IPR005019 Methyladenine glycosylase RAM_05385 IPR004597 DNA-3-methyladenine glycosylase I RAM_05390 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RAM_05390 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_05390 IPR001753 Enoyl-CoA hydratase/isomerase RAM_05390 IPR029045 ClpP/crotonase-like domain superfamily RAM_05400 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B RAM_05400 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RAM_05400 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RAM_05400 IPR023042 Peptidase M17, leucine aminopeptidase RAM_05405 IPR036390 Winged helix DNA-binding domain superfamily RAM_05405 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_05405 IPR000847 Transcription regulator HTH, LysR RAM_05405 IPR005119 LysR, substrate-binding RAM_05410 IPR036259 MFS transporter superfamily RAM_05410 IPR020846 Major facilitator superfamily domain RAM_05410 IPR011701 Major facilitator superfamily RAM_05420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_05420 IPR002935 Class I-like SAM-dependent O-methyltransferase RAM_05425 IPR013325 RNA polymerase sigma factor, region 2 RAM_05425 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_05425 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_05425 IPR007627 RNA polymerase sigma-70 region 2 RAM_05425 IPR039425 RNA polymerase sigma-70 like RAM_05425 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_05425 IPR014284 RNA polymerase sigma-70 like domain RAM_05435 IPR001940 Peptidase S1C RAM_05435 IPR009003 Peptidase S1, PA clan RAM_05435 IPR011782 Peptidase S1C, Do RAM_05435 IPR036034 PDZ superfamily RAM_05435 IPR001478 PDZ domain RAM_05440 IPR018448 Twin-arginine translocation protein TatB RAM_05440 IPR003369 Sec-independent protein translocase protein TatA/B/E RAM_05445 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_05445 IPR000808 Mrp, conserved site RAM_05445 IPR019591 Mrp/NBP35 ATP-binding protein RAM_05445 IPR002744 MIP18 family-like RAM_05445 IPR034904 Fe-S cluster assembly domain superfamily RAM_05445 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 RAM_05455 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily RAM_05455 IPR038048 Magnesium transporter MgtE, transmembrane domain RAM_05455 IPR006669 Magnesium transporter MgtE RAM_05455 IPR006667 SLC41 divalent cation transporters, integral membrane domain RAM_05455 IPR038076 MgtE, N-terminal domain superfamily RAM_05455 IPR006668 Magnesium transporter, MgtE intracellular domain RAM_05455 IPR000644 CBS domain RAM_05460 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase RAM_05460 IPR011009 Protein kinase-like domain superfamily RAM_05465 IPR018080 Band 7/stomatin-like, conserved site RAM_05465 IPR001972 Stomatin family RAM_05465 IPR036013 Band 7/SPFH domain superfamily RAM_05465 IPR001107 Band 7 domain RAM_05480 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_05480 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_05480 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_05480 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_05480 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_05480 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_05480 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_05490 IPR006059 Bacterial extracellular solute-binding protein RAM_05495 IPR035906 MetI-like superfamily RAM_05495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_05500 IPR035906 MetI-like superfamily RAM_05500 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_05505 IPR008995 Molybdate/tungstate binding, C-terminal RAM_05505 IPR017871 ABC transporter, conserved site RAM_05505 IPR003439 ABC transporter-like RAM_05505 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_05505 IPR003593 AAA+ ATPase domain RAM_05505 IPR040582 MalK, OB fold domain RAM_05520 IPR009057 Homeobox-like domain superfamily RAM_05520 IPR001647 DNA-binding HTH domain, TetR-type RAM_05520 IPR041642 HTH-type transcriptional repressor KstR, C-terminal RAM_05525 IPR011701 Major facilitator superfamily RAM_05525 IPR036259 MFS transporter superfamily RAM_05525 IPR005829 Sugar transporter, conserved site RAM_05525 IPR020846 Major facilitator superfamily domain RAM_05530 IPR001789 Signal transduction response regulator, receiver domain RAM_05530 IPR000792 Transcription regulator LuxR, C-terminal RAM_05530 IPR016032 Signal transduction response regulator, C-terminal effector RAM_05530 IPR011006 CheY-like superfamily RAM_05535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_05535 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_05545 IPR013325 RNA polymerase sigma factor, region 2 RAM_05545 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_05545 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_05545 IPR007630 RNA polymerase sigma-70 region 4 RAM_05545 IPR039425 RNA polymerase sigma-70 like RAM_05545 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_05545 IPR007627 RNA polymerase sigma-70 region 2 RAM_05545 IPR014284 RNA polymerase sigma-70 like domain RAM_05570 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RAM_05570 IPR004488 Magnesium/cobalt transport protein CorA RAM_05585 IPR015797 NUDIX hydrolase-like domain superfamily RAM_05585 IPR036412 HAD-like superfamily RAM_05585 IPR006357 HAD-superfamily hydrolase, subfamily IIA RAM_05585 IPR020084 NUDIX hydrolase, conserved site RAM_05585 IPR000086 NUDIX hydrolase domain RAM_05585 IPR023214 HAD superfamily RAM_05585 IPR020476 NUDIX hydrolase RAM_05600 IPR016195 Polymerase/histidinol phosphatase-like RAM_05600 IPR003141 Polymerase/histidinol phosphatase, N-terminal RAM_05600 IPR004013 PHP domain RAM_05605 IPR002771 Multiple antibiotic resistance (MarC)-related RAM_05630 IPR001650 Helicase, C-terminal RAM_05630 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RAM_05630 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_05630 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_05630 IPR030880 DEAD-box ATP-dependent RNA helicase CshA RAM_05630 IPR011545 DEAD/DEAH box helicase domain RAM_05630 IPR014014 RNA helicase, DEAD-box type, Q motif RAM_05655 IPR009057 Homeobox-like domain superfamily RAM_05655 IPR001647 DNA-binding HTH domain, TetR-type RAM_05655 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_05665 IPR029058 Alpha/Beta hydrolase fold RAM_05665 IPR000073 Alpha/beta hydrolase fold-1 RAM_05670 IPR013573 Transcription regulator YcdC, C-terminal RAM_05670 IPR019915 Transcription regulator, pyrimidine utilisation, RutR RAM_05670 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_05670 IPR009057 Homeobox-like domain superfamily RAM_05670 IPR001647 DNA-binding HTH domain, TetR-type RAM_05675 IPR000639 Epoxide hydrolase-like RAM_05675 IPR029058 Alpha/Beta hydrolase fold RAM_05675 IPR000073 Alpha/beta hydrolase fold-1 RAM_05675 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase RAM_05685 IPR036873 Rhodanese-like domain superfamily RAM_05685 IPR001763 Rhodanese-like domain RAM_05685 IPR000594 THIF-type NAD/FAD binding fold RAM_05685 IPR035985 Ubiquitin-activating enzyme RAM_05695 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RAM_05695 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RAM_05695 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RAM_05695 IPR006656 Molybdopterin oxidoreductase RAM_05695 IPR006657 Molybdopterin dinucleotide-binding domain RAM_05695 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_05700 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site RAM_05700 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RAM_05700 IPR017121 Nitrite reductase [NAD(P)H], large subunit RAM_05700 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_05700 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily RAM_05700 IPR007419 BFD-like [2Fe-2S]-binding domain RAM_05700 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily RAM_05700 IPR023753 FAD/NAD(P)-binding domain RAM_05700 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal RAM_05700 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RAM_05700 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB RAM_05700 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_05705 IPR004737 Nitrate transporter RAM_05705 IPR036259 MFS transporter superfamily RAM_05705 IPR011701 Major facilitator superfamily RAM_05710 IPR007419 BFD-like [2Fe-2S]-binding domain RAM_05710 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal RAM_05710 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site RAM_05710 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RAM_05710 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily RAM_05710 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB RAM_05710 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily RAM_05710 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RAM_05710 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type RAM_05710 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RAM_05710 IPR023753 FAD/NAD(P)-binding domain RAM_05710 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_05715 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily RAM_05715 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RAM_05715 IPR023753 FAD/NAD(P)-binding domain RAM_05715 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site RAM_05715 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type RAM_05715 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RAM_05715 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily RAM_05715 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal RAM_05715 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RAM_05715 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB RAM_05715 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_05715 IPR007419 BFD-like [2Fe-2S]-binding domain RAM_05740 IPR001034 DeoR-type HTH domain RAM_05740 IPR036390 Winged helix DNA-binding domain superfamily RAM_05740 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_05740 IPR028349 Protein PafC RAM_05740 IPR013196 Helix-turn-helix, type 11 RAM_05740 IPR026881 WYL domain RAM_05755 IPR034739 UvrD/AddA helicase, N-terminal RAM_05755 IPR014016 UvrD-like helicase, ATP-binding domain RAM_05755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_05755 IPR000212 DNA helicase, UvrD/REP type RAM_05755 IPR014017 UvrD-like DNA helicase, C-terminal RAM_05755 IPR013986 DExx box DNA helicase domain superfamily RAM_05760 IPR000212 DNA helicase, UvrD/REP type RAM_05760 IPR034739 UvrD/AddA helicase, N-terminal RAM_05760 IPR014017 UvrD-like DNA helicase, C-terminal RAM_05760 IPR014016 UvrD-like helicase, ATP-binding domain RAM_05760 IPR005751 ATP-dependent DNA helicase PcrA RAM_05760 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_05760 IPR013986 DExx box DNA helicase domain superfamily RAM_05780 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RAM_05795 IPR025646 Domain of unknown function DUF4350 RAM_05800 IPR041628 ChlI/MoxR, AAA lid domain RAM_05800 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_05800 IPR011703 ATPase, AAA-3 RAM_05825 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative RAM_05845 IPR001431 Peptidase M16, zinc-binding site RAM_05845 IPR011765 Peptidase M16, N-terminal RAM_05845 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RAM_05845 IPR007863 Peptidase M16, C-terminal RAM_05850 IPR022925 NADH pyrophosphatase NudC RAM_05850 IPR000086 NUDIX hydrolase domain RAM_05850 IPR015375 NADH pyrophosphatase-like, N-terminal RAM_05850 IPR015376 Zinc ribbon, NADH pyrophosphatase RAM_05850 IPR015797 NUDIX hydrolase-like domain superfamily RAM_05850 IPR020084 NUDIX hydrolase, conserved site RAM_05855 IPR000835 MarR-type HTH domain RAM_05855 IPR000600 ROK family RAM_05855 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_05855 IPR036390 Winged helix DNA-binding domain superfamily RAM_05865 IPR035906 MetI-like superfamily RAM_05865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_05870 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_05870 IPR035906 MetI-like superfamily RAM_05875 IPR036291 NAD(P)-binding domain superfamily RAM_05875 IPR019802 Glycoside hydrolase, family 4, conserved site RAM_05875 IPR001088 Glycoside hydrolase, family 4 RAM_05875 IPR022616 Glycosyl hydrolase, family 4, C-terminal RAM_05875 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RAM_05890 IPR001845 HTH ArsR-type DNA-binding domain RAM_05890 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_05890 IPR036390 Winged helix DNA-binding domain superfamily RAM_05890 IPR011991 ArsR-like helix-turn-helix domain RAM_05900 IPR003474 Gluconate transporter RAM_05905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_05905 IPR006001 Carbohydrate kinase, thermoresistant glucokinase RAM_05915 IPR004485 Cobalamin biosynthesis CobD/CbiB RAM_05930 IPR002994 Surfeit locus 1/Shy1 RAM_05935 IPR036196 Phosphotyrosine protein phosphatase I superfamily RAM_05935 IPR023485 Phosphotyrosine protein phosphatase I RAM_05935 IPR017867 Protein-tyrosine phosphatase, low molecular weight RAM_05945 IPR002701 Chorismate mutase II, prokaryotic-type RAM_05945 IPR008240 Chorismate mutase, periplasmic RAM_05945 IPR036263 Chorismate mutase type II superfamily RAM_05950 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily RAM_05950 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RAM_05955 IPR003743 C4-type zinc ribbon domain RAM_05960 IPR013078 Histidine phosphatase superfamily, clade-1 RAM_05960 IPR029033 Histidine phosphatase superfamily RAM_05960 IPR036397 Ribonuclease H superfamily RAM_05960 IPR014636 RNase H, phosphoglycerate mutase domain-containing RAM_05960 IPR012337 Ribonuclease H-like superfamily RAM_05960 IPR002156 Ribonuclease H domain RAM_05970 IPR000802 Arsenical pump membrane protein, ArsB RAM_05975 IPR001789 Signal transduction response regulator, receiver domain RAM_05975 IPR011006 CheY-like superfamily RAM_05975 IPR016032 Signal transduction response regulator, C-terminal effector RAM_05975 IPR000792 Transcription regulator LuxR, C-terminal RAM_05985 IPR007627 RNA polymerase sigma-70 region 2 RAM_05985 IPR007630 RNA polymerase sigma-70 region 4 RAM_05985 IPR013325 RNA polymerase sigma factor, region 2 RAM_05985 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_05985 IPR039425 RNA polymerase sigma-70 like RAM_05985 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_05985 IPR014284 RNA polymerase sigma-70 like domain RAM_05985 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_06000 IPR028202 Reductase, C-terminal RAM_06000 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_06000 IPR023753 FAD/NAD(P)-binding domain RAM_06000 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_06035 IPR038765 Papain-like cysteine peptidase superfamily RAM_06035 IPR000064 Endopeptidase, NLPC/P60 domain RAM_06055 IPR001900 Ribonuclease II/R RAM_06055 IPR013668 Ribonuclease R winged-helix domain RAM_06055 IPR004476 Ribonuclease II/ribonuclease R RAM_06055 IPR013223 Ribonuclease B, N-terminal OB domain RAM_06055 IPR012340 Nucleic acid-binding, OB-fold RAM_06055 IPR040476 RNase II/RNase R, cold shock domain RAM_06055 IPR011129 Cold shock domain RAM_06060 IPR002491 ABC transporter periplasmic binding domain RAM_06060 IPR023544 ABC transporter, vitamin B12-binding protein RAM_06065 IPR016161 Aldehyde/histidinol dehydrogenase RAM_06065 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_06065 IPR016160 Aldehyde dehydrogenase, cysteine active site RAM_06065 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_06065 IPR017656 Putative phosphonoacetaldehyde dehydrogenase RAM_06065 IPR015590 Aldehyde dehydrogenase domain RAM_06065 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_06070 IPR015424 Pyridoxal phosphate-dependent transferase RAM_06070 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_06070 IPR005814 Aminotransferase class-III RAM_06070 IPR004632 4-aminobutyrate aminotransferase, bacterial RAM_06070 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_06090 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_06090 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_06090 IPR011711 GntR, C-terminal RAM_06090 IPR000524 Transcription regulator HTH, GntR RAM_06090 IPR036390 Winged helix DNA-binding domain superfamily RAM_06095 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_06095 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_06095 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_06095 IPR017749 1-pyrroline dehydrogenase RAM_06095 IPR015657 Aminobutyraldehyde dehydrogenase RAM_06095 IPR015590 Aldehyde dehydrogenase domain RAM_06095 IPR016161 Aldehyde/histidinol dehydrogenase RAM_06100 IPR013611 Transport-associated OB, type 2 RAM_06100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06100 IPR008995 Molybdate/tungstate binding, C-terminal RAM_06100 IPR017871 ABC transporter, conserved site RAM_06100 IPR003439 ABC transporter-like RAM_06100 IPR003593 AAA+ ATPase domain RAM_06105 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein RAM_06105 IPR006059 Bacterial extracellular solute-binding protein RAM_06110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_06110 IPR035906 MetI-like superfamily RAM_06115 IPR035906 MetI-like superfamily RAM_06115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_06120 IPR005944 Proline iminopeptidase RAM_06120 IPR002410 Peptidase S33 RAM_06120 IPR000073 Alpha/beta hydrolase fold-1 RAM_06120 IPR029058 Alpha/Beta hydrolase fold RAM_06125 IPR003824 Undecaprenyl-diphosphatase UppP RAM_06135 IPR040442 Pyruvate kinase-like domain superfamily RAM_06135 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RAM_06135 IPR003700 Ketopantoate hydroxymethyltransferase RAM_06140 IPR012340 Nucleic acid-binding, OB-fold RAM_06140 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RAM_06140 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_06140 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal RAM_06140 IPR002313 Lysine-tRNA ligase, class II RAM_06140 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RAM_06140 IPR031553 Lysyl-tRNA synthetase, N-terminal transmembrane region RAM_06140 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RAM_06150 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_06150 IPR007061 Protein of unknown function DUF664 RAM_06165 IPR003694 NAD(+) synthetase RAM_06165 IPR022310 NAD/GMP synthase RAM_06165 IPR003010 Carbon-nitrogen hydrolase RAM_06165 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_06165 IPR036526 Carbon-nitrogen hydrolase superfamily RAM_06165 IPR014445 Glutamine-dependent NAD(+) synthetase RAM_06165 IPR000132 Nitrilase/cyanide hydratase, conserved site RAM_06170 IPR026389 Protein translocase subunit SecA, Actinobacteria-type RAM_06170 IPR000185 Protein translocase subunit SecA RAM_06170 IPR020937 SecA conserved site RAM_06170 IPR011115 SecA DEAD-like, N-terminal RAM_06170 IPR014018 SecA motor DEAD RAM_06170 IPR011130 SecA, preprotein cross-linking domain RAM_06170 IPR011116 SecA Wing/Scaffold RAM_06170 IPR036266 SecA, Wing/Scaffold superfamily RAM_06170 IPR036670 SecA, preprotein cross-linking domain superfamily RAM_06170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06175 IPR029058 Alpha/Beta hydrolase fold RAM_06175 IPR000073 Alpha/beta hydrolase fold-1 RAM_06190 IPR008147 Glutamine synthetase, beta-Grasp domain RAM_06190 IPR036651 Glutamine synthetase, N-terminal domain superfamily RAM_06190 IPR004809 Glutamine synthetase type I RAM_06190 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_06190 IPR008146 Glutamine synthetase, catalytic domain RAM_06190 IPR027303 Glutamine synthetase, glycine-rich site RAM_06195 IPR023631 Amidase signature domain RAM_06195 IPR020556 Amidase, conserved site RAM_06195 IPR036928 Amidase signature (AS) superfamily RAM_06195 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RAM_06195 IPR000120 Amidase RAM_06200 IPR036390 Winged helix DNA-binding domain superfamily RAM_06200 IPR011991 ArsR-like helix-turn-helix domain RAM_06200 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RAM_06200 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RAM_06200 IPR019888 Transcription regulator AsnC-type RAM_06200 IPR011008 Dimeric alpha-beta barrel RAM_06200 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_06200 IPR000485 AsnC-type HTH domain RAM_06210 IPR001674 GMP synthase, C-terminal RAM_06210 IPR017926 Glutamine amidotransferase RAM_06210 IPR029062 Class I glutamine amidotransferase-like RAM_06210 IPR025777 GMP synthetase ATP pyrophosphatase domain RAM_06210 IPR022310 NAD/GMP synthase RAM_06210 IPR004739 GMP synthase, glutamine amidotransferase RAM_06210 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_06210 IPR022955 GMP synthase RAM_06215 IPR001204 Phosphate transporter RAM_06220 IPR001204 Phosphate transporter RAM_06225 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RAM_06225 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme RAM_06225 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain RAM_06235 IPR004809 Glutamine synthetase type I RAM_06235 IPR027303 Glutamine synthetase, glycine-rich site RAM_06235 IPR008146 Glutamine synthetase, catalytic domain RAM_06235 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_06235 IPR036651 Glutamine synthetase, N-terminal domain superfamily RAM_06235 IPR008147 Glutamine synthetase, beta-Grasp domain RAM_06235 IPR027302 Glutamine synthetase, N-terminal conserved site RAM_06235 IPR001637 Glutamine synthetase class-I, adenylation site RAM_06250 IPR025445 Protein of unknown function DUF4191 RAM_06255 IPR014017 UvrD-like DNA helicase, C-terminal RAM_06255 IPR013986 DExx box DNA helicase domain superfamily RAM_06255 IPR002121 HRDC domain RAM_06255 IPR034739 UvrD/AddA helicase, N-terminal RAM_06255 IPR014016 UvrD-like helicase, ATP-binding domain RAM_06255 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06255 IPR000212 DNA helicase, UvrD/REP type RAM_06255 IPR010997 HRDC-like superfamily RAM_06265 IPR003482 Transcription factor WhiB RAM_06265 IPR034768 WhiB-like iron-sulfur binding domain RAM_06295 IPR000719 Protein kinase domain RAM_06295 IPR011009 Protein kinase-like domain superfamily RAM_06295 IPR004147 UbiB domain RAM_06315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_06315 IPR036034 PDZ superfamily RAM_06315 IPR027065 Lon protease RAM_06315 IPR001478 PDZ domain RAM_06315 IPR039381 Endopeptidase La, PDZ domain RAM_06315 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_06315 IPR008269 Peptidase S16, Lon proteolytic domain RAM_06325 IPR005372 Uncharacterised protein family UPF0182 RAM_06330 IPR002938 FAD-binding domain RAM_06330 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_06335 IPR003012 Tetracycline transcriptional regulator, TetR RAM_06335 IPR004111 Tetracycline repressor TetR, C-terminal RAM_06335 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_06335 IPR001647 DNA-binding HTH domain, TetR-type RAM_06335 IPR009057 Homeobox-like domain superfamily RAM_06335 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_06345 IPR005139 Peptide chain release factor RAM_06345 IPR000352 Peptide chain release factor class I RAM_06345 IPR004374 Peptide chain release factor 2 RAM_06350 IPR017871 ABC transporter, conserved site RAM_06350 IPR005286 Cell division protein FtsE, ATP-binding RAM_06350 IPR003593 AAA+ ATPase domain RAM_06350 IPR003439 ABC transporter-like RAM_06350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06355 IPR003838 ABC transporter permease protein domain RAM_06355 IPR004513 Cell division protein FtsX RAM_06355 IPR040690 FtsX, extracellular domain RAM_06360 IPR023620 Small protein B RAM_06360 IPR000037 SsrA-binding protein RAM_06360 IPR020081 SsrA-binding protein, conserved site RAM_06385 IPR000792 Transcription regulator LuxR, C-terminal RAM_06385 IPR001789 Signal transduction response regulator, receiver domain RAM_06385 IPR016032 Signal transduction response regulator, C-terminal effector RAM_06385 IPR011006 CheY-like superfamily RAM_06390 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_06390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_06390 IPR003594 Histidine kinase/HSP90-like ATPase RAM_06405 IPR000160 GGDEF domain RAM_06405 IPR033416 Periplasmic sensor domain CHASE7 RAM_06405 IPR029787 Nucleotide cyclase RAM_06420 IPR022313 Phenylalanine/histidine ammonia-lyases, active site RAM_06420 IPR001106 Aromatic amino acid lyase RAM_06420 IPR024083 Fumarase/histidase, N-terminal RAM_06420 IPR005921 Histidine ammonia-lyase RAM_06420 IPR008948 L-Aspartase-like RAM_06425 IPR023637 Urocanase RAM_06425 IPR035401 Urocanase, C-terminal domain RAM_06425 IPR036190 Urocanase superfamily RAM_06425 IPR038364 Urocanase, central domain superfamily RAM_06425 IPR035085 Urocanase, Rossmann-like domain RAM_06425 IPR035400 Urocanase, N-terminal domain RAM_06425 IPR023636 Urocanase conserved site RAM_06430 IPR002933 Peptidase M20 RAM_06430 IPR036264 Bacterial exopeptidase dimerisation domain RAM_06430 IPR011650 Peptidase M20, dimerisation domain RAM_06430 IPR010158 Amidase, carbamoylase-type RAM_06435 IPR006680 Amidohydrolase-related RAM_06435 IPR023512 Deaminase MtaD/DadD RAM_06435 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_06435 IPR032466 Metal-dependent hydrolase RAM_06440 IPR032466 Metal-dependent hydrolase RAM_06440 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_06440 IPR005920 Imidazolonepropionase RAM_06440 IPR006680 Amidohydrolase-related RAM_06445 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_06445 IPR002938 FAD-binding domain RAM_06460 IPR001204 Phosphate transporter RAM_06480 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_06480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_06485 IPR011006 CheY-like superfamily RAM_06485 IPR016032 Signal transduction response regulator, C-terminal effector RAM_06485 IPR001789 Signal transduction response regulator, receiver domain RAM_06485 IPR000792 Transcription regulator LuxR, C-terminal RAM_06490 IPR002938 FAD-binding domain RAM_06490 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_06510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06510 IPR003439 ABC transporter-like RAM_06510 IPR003593 AAA+ ATPase domain RAM_06510 IPR017871 ABC transporter, conserved site RAM_06515 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal RAM_06515 IPR011545 DEAD/DEAH box helicase domain RAM_06515 IPR007502 Helicase-associated domain RAM_06515 IPR001650 Helicase, C-terminal RAM_06515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06515 IPR010225 ATP-dependent helicase HrpB RAM_06515 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_06520 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RAM_06520 IPR018313 Solute-binding protein family 3, conserved site RAM_06530 IPR012336 Thioredoxin-like fold RAM_06530 IPR036249 Thioredoxin-like superfamily RAM_06530 IPR011009 Protein kinase-like domain superfamily RAM_06530 IPR000719 Protein kinase domain RAM_06530 IPR017441 Protein kinase, ATP binding site RAM_06540 IPR000064 Endopeptidase, NLPC/P60 domain RAM_06540 IPR038765 Papain-like cysteine peptidase superfamily RAM_06555 IPR002938 FAD-binding domain RAM_06555 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_06555 IPR012733 4-hydroxybenzoate 3-monooxygenase RAM_06565 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_06565 IPR007061 Protein of unknown function DUF664 RAM_06570 IPR026891 Fibronectin type III-like domain RAM_06570 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily RAM_06570 IPR002772 Glycoside hydrolase family 3 C-terminal domain RAM_06570 IPR013783 Immunoglobulin-like fold RAM_06570 IPR017853 Glycoside hydrolase superfamily RAM_06570 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_06570 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_06580 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat RAM_06580 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily RAM_06580 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RAM_06580 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RAM_06580 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RAM_06580 IPR005743 DNA gyrase, subunit A RAM_06580 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RAM_06585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_06585 IPR011557 DNA gyrase, subunit B RAM_06585 IPR003594 Histidine kinase/HSP90-like ATPase RAM_06585 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_06585 IPR018522 DNA topoisomerase, type IIA, conserved site RAM_06585 IPR001241 DNA topoisomerase, type IIA RAM_06585 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RAM_06585 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal RAM_06585 IPR006171 TOPRIM domain RAM_06585 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RAM_06585 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_06585 IPR002288 DNA gyrase B subunit, C-terminal RAM_06600 IPR005025 NADPH-dependent FMN reductase-like RAM_06600 IPR029039 Flavoprotein-like superfamily RAM_06600 IPR019912 FMN reductase, MsuE-like RAM_06630 IPR001851 ABC transporter, permease RAM_06635 IPR001851 ABC transporter, permease RAM_06640 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06640 IPR015861 ABC transporter, ribose import, RbsA RAM_06640 IPR003593 AAA+ ATPase domain RAM_06640 IPR017871 ABC transporter, conserved site RAM_06640 IPR003439 ABC transporter-like RAM_06645 IPR033893 ABC transporter periplasmic-binding protein YtfQ RAM_06645 IPR028082 Periplasmic binding protein-like I RAM_06645 IPR025997 Periplasmic binding protein RAM_06650 IPR000843 LacI-type HTH domain RAM_06650 IPR023588 Transcription regulator HTH, PurR RAM_06650 IPR028082 Periplasmic binding protein-like I RAM_06650 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_06655 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06655 IPR042174 DNA-binding RecF, domain 2 RAM_06655 IPR003395 RecF/RecN/SMC, N-terminal RAM_06655 IPR018078 DNA-binding, RecF, conserved site RAM_06655 IPR001238 DNA-binding, RecF RAM_06660 IPR036390 Winged helix DNA-binding domain superfamily RAM_06660 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_06660 IPR002577 Helix-turn-helix, HxlR type RAM_06660 IPR011991 ArsR-like helix-turn-helix domain RAM_06665 IPR036291 NAD(P)-binding domain superfamily RAM_06665 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_06665 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_06670 IPR009057 Homeobox-like domain superfamily RAM_06670 IPR001647 DNA-binding HTH domain, TetR-type RAM_06670 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_06670 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) RAM_06685 IPR003593 AAA+ ATPase domain RAM_06685 IPR003439 ABC transporter-like RAM_06685 IPR017871 ABC transporter, conserved site RAM_06685 IPR041102 UvrA, interaction domain RAM_06685 IPR041552 UvrA DNA-binding domain RAM_06685 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06685 IPR004602 UvrABC system subunit A RAM_06715 IPR022877 Protein of unknown funcion UPF0173 RAM_06715 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_06715 IPR001279 Metallo-beta-lactamase RAM_06720 IPR034686 Terpene cyclase-like 2 RAM_06720 IPR008949 Isoprenoid synthase domain superfamily RAM_06730 IPR001316 Peptidase S1A, streptogrisin RAM_06730 IPR009003 Peptidase S1, PA clan RAM_06730 IPR001254 Serine proteases, trypsin domain RAM_06730 IPR004236 Peptidase S1A, alpha-lytic prodomain RAM_06730 IPR018114 Serine proteases, trypsin family, histidine active site RAM_06730 IPR033116 Serine proteases, trypsin family, serine active site RAM_06735 IPR014431 Tellurite resistance methyltransferase, TehB type-2 RAM_06735 IPR004537 Tellurite resistance methyltransferase, TehB RAM_06735 IPR014710 RmlC-like jelly roll fold RAM_06735 IPR015985 Tellurite resistance methyltransferase TehB-like domain RAM_06735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_06745 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_06745 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_06745 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_06745 IPR036291 NAD(P)-binding domain superfamily RAM_06750 IPR017972 Cytochrome P450, conserved site RAM_06750 IPR036396 Cytochrome P450 superfamily RAM_06750 IPR002397 Cytochrome P450, B-class RAM_06750 IPR001128 Cytochrome P450 RAM_06755 IPR012340 Nucleic acid-binding, OB-fold RAM_06755 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RAM_06755 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_06755 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RAM_06755 IPR004523 Aspartate-tRNA synthetase, type 2 RAM_06755 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RAM_06765 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_06765 IPR036291 NAD(P)-binding domain superfamily RAM_06765 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_06775 IPR000073 Alpha/beta hydrolase fold-1 RAM_06775 IPR000639 Epoxide hydrolase-like RAM_06775 IPR023489 Haloalkane dehalogenase, subfamily 1 RAM_06775 IPR029058 Alpha/Beta hydrolase fold RAM_06780 IPR012938 Glucose/Sorbosone dehydrogenase RAM_06780 IPR011042 Six-bladed beta-propeller, TolB-like RAM_06780 IPR019893 PQQ-dependent dehydrogenase, s-GDH family RAM_06780 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase RAM_06790 IPR035439 UPF0145 domain superfamily RAM_06790 IPR002765 Uncharacterised protein family UPF0145 RAM_06795 IPR002765 Uncharacterised protein family UPF0145 RAM_06795 IPR035439 UPF0145 domain superfamily RAM_06800 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_06800 IPR029056 Ribokinase-like RAM_06800 IPR011611 Carbohydrate kinase PfkB RAM_06800 IPR030877 Sulfofructose kinase RAM_06800 IPR002139 Ribokinase/fructokinase RAM_06805 IPR022616 Glycosyl hydrolase, family 4, C-terminal RAM_06805 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RAM_06805 IPR019802 Glycoside hydrolase, family 4, conserved site RAM_06805 IPR036291 NAD(P)-binding domain superfamily RAM_06805 IPR001088 Glycoside hydrolase, family 4 RAM_06815 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RAM_06815 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RAM_06815 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_06820 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG RAM_06820 IPR011251 Luciferase-like domain RAM_06820 IPR036661 Luciferase-like domain superfamily RAM_06825 IPR033922 NAD(P) binding domain of glutamate dehydrogenase RAM_06825 IPR014362 Glutamate dehydrogenase RAM_06825 IPR036291 NAD(P)-binding domain superfamily RAM_06825 IPR033524 Leu/Phe/Val dehydrogenases active site RAM_06825 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RAM_06825 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RAM_06825 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RAM_06835 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_06835 IPR016292 Epoxide hydrolase RAM_06835 IPR000639 Epoxide hydrolase-like RAM_06835 IPR029058 Alpha/Beta hydrolase fold RAM_06835 IPR010497 Epoxide hydrolase, N-terminal RAM_06870 IPR000489 Pterin-binding domain RAM_06870 IPR006390 Dihydropteroate synthase RAM_06870 IPR011005 Dihydropteroate synthase-like RAM_06880 IPR017871 ABC transporter, conserved site RAM_06880 IPR003439 ABC transporter-like RAM_06880 IPR003593 AAA+ ATPase domain RAM_06880 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06920 IPR032477 Beta-1,3-glucanase, N-terminal RAM_06920 IPR000772 Ricin B, lectin domain RAM_06920 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_06920 IPR037176 Osmotin/thaumatin-like superfamily RAM_06920 IPR037398 Glucan endo-1,3-beta-glucosidase RAM_06920 IPR035992 Ricin B-like lectins RAM_06925 IPR004779 Carboxylate/Amino Acid/Amine Transporter RAM_06925 IPR000620 EamA domain RAM_06930 IPR036390 Winged helix DNA-binding domain superfamily RAM_06930 IPR000835 MarR-type HTH domain RAM_06930 IPR023187 Transcriptional regulator MarR-type, conserved site RAM_06930 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_06940 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily RAM_06940 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup RAM_06940 IPR004720 Phosphotransferase system, sorbose subfamily IIB component RAM_06945 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component RAM_06950 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily RAM_06950 IPR033887 PTS system mannose/sorbose specific IIA subunit RAM_06950 IPR004701 Phosphotransferase system, mannose-type IIA component RAM_06950 IPR013789 Phosphotransferase system, mannose family IIA component RAM_06965 IPR005158 Bacterial transcriptional activator domain RAM_06965 IPR002182 NB-ARC RAM_06965 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_06965 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06965 IPR013026 Tetratricopeptide repeat-containing domain RAM_06965 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_06965 IPR019734 Tetratricopeptide repeat RAM_06965 IPR016032 Signal transduction response regulator, C-terminal effector RAM_06965 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_06975 IPR036259 MFS transporter superfamily RAM_06975 IPR011701 Major facilitator superfamily RAM_06975 IPR020846 Major facilitator superfamily domain RAM_06980 IPR015168 SsuA/THI5-like RAM_06980 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RAM_06980 IPR010067 Aliphatic sulfonates-binding protein RAM_06985 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06985 IPR003593 AAA+ ATPase domain RAM_06985 IPR003439 ABC transporter-like RAM_06985 IPR017871 ABC transporter, conserved site RAM_06985 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RAM_06990 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RAM_06990 IPR003439 ABC transporter-like RAM_06990 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_06990 IPR003593 AAA+ ATPase domain RAM_06990 IPR017871 ABC transporter, conserved site RAM_07010 IPR009057 Homeobox-like domain superfamily RAM_07010 IPR001647 DNA-binding HTH domain, TetR-type RAM_07010 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_07030 IPR001789 Signal transduction response regulator, receiver domain RAM_07030 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_07030 IPR016032 Signal transduction response regulator, C-terminal effector RAM_07030 IPR011006 CheY-like superfamily RAM_07030 IPR000792 Transcription regulator LuxR, C-terminal RAM_07040 IPR003593 AAA+ ATPase domain RAM_07040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_07040 IPR015854 ABC transporter, lipoprotein release, LolD RAM_07040 IPR003439 ABC transporter-like RAM_07040 IPR017871 ABC transporter, conserved site RAM_07050 IPR018208 Glycoside hydrolase family 11, active site 1 RAM_07050 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_07050 IPR033119 Glycoside hydrolase family 11, active site 2 RAM_07050 IPR001137 Glycoside hydrolase family 11 RAM_07050 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RAM_07050 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_07050 IPR001919 Carbohydrate-binding type-2 domain RAM_07050 IPR013319 Glycoside hydrolase family 11/12 RAM_07050 IPR033123 Glycosyl hydrolases family 11 (GH11) domain RAM_07055 IPR013319 Glycoside hydrolase family 11/12 RAM_07055 IPR002509 NodB homology domain RAM_07055 IPR001919 Carbohydrate-binding type-2 domain RAM_07055 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_07055 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RAM_07055 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_07055 IPR033119 Glycoside hydrolase family 11, active site 2 RAM_07055 IPR001137 Glycoside hydrolase family 11 RAM_07055 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RAM_07055 IPR033123 Glycosyl hydrolases family 11 (GH11) domain RAM_07055 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_07055 IPR018208 Glycoside hydrolase family 11, active site 1 RAM_07060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_07060 IPR003593 AAA+ ATPase domain RAM_07060 IPR003439 ABC transporter-like RAM_07060 IPR017871 ABC transporter, conserved site RAM_07095 IPR011701 Major facilitator superfamily RAM_07095 IPR020846 Major facilitator superfamily domain RAM_07095 IPR005829 Sugar transporter, conserved site RAM_07095 IPR004638 Drug resistance transporter EmrB-like RAM_07095 IPR036259 MFS transporter superfamily RAM_07100 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_07100 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_07100 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_07100 IPR016161 Aldehyde/histidinol dehydrogenase RAM_07100 IPR015590 Aldehyde dehydrogenase domain RAM_07110 IPR011613 GH15-like domain RAM_07110 IPR008928 Six-hairpin glycosidase superfamily RAM_07110 IPR012341 Six-hairpin glycosidase-like superfamily RAM_07115 IPR004627 L-threonine 3-dehydrogenase RAM_07115 IPR036291 NAD(P)-binding domain superfamily RAM_07115 IPR013154 Alcohol dehydrogenase, N-terminal RAM_07115 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_07115 IPR011032 GroES-like superfamily RAM_07115 IPR013149 Alcohol dehydrogenase, C-terminal RAM_07135 IPR011251 Luciferase-like domain RAM_07135 IPR036661 Luciferase-like domain superfamily RAM_07135 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent RAM_07150 IPR038063 L,D-transpeptidase catalytic domain-like RAM_07150 IPR005490 L,D-transpeptidase catalytic domain RAM_07150 IPR041280 Bacterial Ig domain, transpeptidase-associated RAM_07160 IPR004751 Drug antiporter protein RAM_07160 IPR011701 Major facilitator superfamily RAM_07160 IPR036259 MFS transporter superfamily RAM_07160 IPR020846 Major facilitator superfamily domain RAM_07165 IPR014782 Peptidase M1, membrane alanine aminopeptidase RAM_07165 IPR034016 Aminopeptidase N-type RAM_07165 IPR024571 ERAP1-like C-terminal domain RAM_07165 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase RAM_07165 IPR042097 Aminopeptidase N-like , N-terminal RAM_07190 IPR022385 Rhs repeat-associated core RAM_07190 IPR006530 YD repeat RAM_07190 IPR031325 RHS repeat RAM_07190 IPR001826 RHS protein RAM_07225 IPR020843 Polyketide synthase, enoylreductase domain RAM_07225 IPR013149 Alcohol dehydrogenase, C-terminal RAM_07225 IPR014043 Acyl transferase RAM_07225 IPR036736 ACP-like superfamily RAM_07225 IPR001227 Acyl transferase domain superfamily RAM_07225 IPR013154 Alcohol dehydrogenase, N-terminal RAM_07225 IPR011032 GroES-like superfamily RAM_07225 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_07225 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_07225 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_07225 IPR036291 NAD(P)-binding domain superfamily RAM_07225 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_07225 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_07225 IPR020807 Polyketide synthase, dehydratase domain RAM_07225 IPR016039 Thiolase-like RAM_07225 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_07225 IPR009081 Phosphopantetheine binding ACP domain RAM_07225 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_07225 IPR018201 Beta-ketoacyl synthase, active site RAM_07225 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_07225 IPR013968 Polyketide synthase, ketoreductase domain RAM_07255 IPR004942 Roadblock/LAMTOR2 domain RAM_07270 IPR002397 Cytochrome P450, B-class RAM_07270 IPR036396 Cytochrome P450 superfamily RAM_07270 IPR017972 Cytochrome P450, conserved site RAM_07270 IPR001128 Cytochrome P450 RAM_07280 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_07280 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_07280 IPR036291 NAD(P)-binding domain superfamily RAM_07285 IPR036390 Winged helix DNA-binding domain superfamily RAM_07285 IPR005119 LysR, substrate-binding RAM_07285 IPR000847 Transcription regulator HTH, LysR RAM_07285 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_07290 IPR036291 NAD(P)-binding domain superfamily RAM_07290 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_07300 IPR002938 FAD-binding domain RAM_07300 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_07305 IPR011075 Tetracyclin repressor-like, C-terminal domain RAM_07305 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_07305 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_07305 IPR001647 DNA-binding HTH domain, TetR-type RAM_07305 IPR009057 Homeobox-like domain superfamily RAM_07335 IPR023210 NADP-dependent oxidoreductase domain RAM_07335 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_07345 IPR013325 RNA polymerase sigma factor, region 2 RAM_07345 IPR014325 RNA polymerase sigma-E factor, actinobacteria RAM_07345 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_07345 IPR014284 RNA polymerase sigma-70 like domain RAM_07345 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_07345 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_07345 IPR007627 RNA polymerase sigma-70 region 2 RAM_07345 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_07380 IPR002182 NB-ARC RAM_07380 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_07380 IPR019734 Tetratricopeptide repeat RAM_07380 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_07380 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_07380 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_07380 IPR016032 Signal transduction response regulator, C-terminal effector RAM_07380 IPR005158 Bacterial transcriptional activator domain RAM_07380 IPR013026 Tetratricopeptide repeat-containing domain RAM_07390 IPR004294 Carotenoid oxygenase RAM_07420 IPR013785 Aldolase-type TIM barrel RAM_07420 IPR000891 Pyruvate carboxyltransferase RAM_07425 IPR020845 AMP-binding, conserved site RAM_07425 IPR025110 AMP-binding enzyme, C-terminal domain RAM_07425 IPR000873 AMP-dependent synthetase/ligase RAM_07430 IPR005674 CocE/Serine esterase RAM_07430 IPR029058 Alpha/Beta hydrolase fold RAM_07430 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal RAM_07430 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain RAM_07430 IPR008979 Galactose-binding-like domain superfamily RAM_07440 IPR016032 Signal transduction response regulator, C-terminal effector RAM_07440 IPR000792 Transcription regulator LuxR, C-terminal RAM_07440 IPR011006 CheY-like superfamily RAM_07440 IPR001789 Signal transduction response regulator, receiver domain RAM_07455 IPR012334 Pectin lyase fold RAM_07465 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_07465 IPR013471 Ribonuclease Z/BN RAM_07465 IPR001279 Metallo-beta-lactamase RAM_07470 IPR005982 Thioredoxin reductase RAM_07470 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RAM_07470 IPR023753 FAD/NAD(P)-binding domain RAM_07470 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_07475 IPR003594 Histidine kinase/HSP90-like ATPase RAM_07475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_07475 IPR013767 PAS fold RAM_07475 IPR005467 Histidine kinase domain RAM_07475 IPR035965 PAS domain superfamily RAM_07475 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_07475 IPR000014 PAS domain RAM_07475 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_07475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_07480 IPR019819 Carboxylesterase type B, conserved site RAM_07480 IPR000997 Cholinesterase RAM_07480 IPR029058 Alpha/Beta hydrolase fold RAM_07480 IPR002018 Carboxylesterase, type B RAM_07480 IPR019826 Carboxylesterase type B, active site RAM_07520 IPR036291 NAD(P)-binding domain superfamily RAM_07520 IPR003462 Ornithine cyclodeaminase/mu-crystallin RAM_07520 IPR023401 Ornithine cyclodeaminase, N-terminal RAM_07535 IPR000572 Oxidoreductase, molybdopterin-binding domain RAM_07535 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily RAM_07540 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_07540 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RAM_07540 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_07540 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_07540 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RAM_07540 IPR001433 Oxidoreductase FAD/NAD(P)-binding RAM_07540 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_07540 IPR012675 Beta-grasp domain superfamily RAM_07540 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_07540 IPR017938 Riboflavin synthase-like beta-barrel RAM_07565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_07565 IPR022812 Dynamin superfamily RAM_07570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_07570 IPR022812 Dynamin superfamily RAM_07580 IPR036390 Winged helix DNA-binding domain superfamily RAM_07580 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_07580 IPR002577 Helix-turn-helix, HxlR type RAM_07585 IPR020845 AMP-binding, conserved site RAM_07585 IPR000873 AMP-dependent synthetase/ligase RAM_07585 IPR025110 AMP-binding enzyme, C-terminal domain RAM_07585 IPR042099 AMP-dependent synthetase-like superfamily RAM_07600 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative RAM_07600 IPR012349 FMN-binding split barrel RAM_07600 IPR019920 F420-binding domain, putative RAM_07605 IPR012341 Six-hairpin glycosidase-like superfamily RAM_07605 IPR008928 Six-hairpin glycosidase superfamily RAM_07605 IPR019834 Glycoside hydrolase, family 8, conserved site RAM_07605 IPR002037 Glycoside hydrolase, family 8 RAM_07610 IPR036291 NAD(P)-binding domain superfamily RAM_07610 IPR000683 Oxidoreductase, N-terminal RAM_07610 IPR004104 Oxidoreductase, C-terminal RAM_07615 IPR001320 Ionotropic glutamate receptor RAM_07615 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RAM_07615 IPR018313 Solute-binding protein family 3, conserved site RAM_07620 IPR035906 MetI-like superfamily RAM_07620 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_07620 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RAM_07625 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RAM_07625 IPR003439 ABC transporter-like RAM_07625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_07625 IPR017871 ABC transporter, conserved site RAM_07625 IPR003593 AAA+ ATPase domain RAM_07630 IPR013559 YheO-like RAM_07630 IPR039445 Transcriptional regulator DauR-like, HTH domain RAM_07630 IPR039446 Transcriptional regulator DauR-like RAM_07640 IPR035595 UDP-glycosyltransferase family, conserved site RAM_07640 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase RAM_07640 IPR006326 UDP-glycosyltransferase, MGT RAM_07645 IPR029058 Alpha/Beta hydrolase fold RAM_07645 IPR000073 Alpha/beta hydrolase fold-1 RAM_07650 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_07650 IPR017871 ABC transporter, conserved site RAM_07650 IPR003593 AAA+ ATPase domain RAM_07650 IPR003439 ABC transporter-like RAM_07670 IPR001126 UmuC domain RAM_07670 IPR036775 DNA polymerase, Y-family, little finger domain superfamily RAM_07670 IPR024728 DNA polymerase type-Y, HhH motif RAM_07670 IPR022880 DNA polymerase IV RAM_07670 IPR017961 DNA polymerase, Y-family, little finger domain RAM_07680 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_07680 IPR011711 GntR, C-terminal RAM_07680 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_07680 IPR036390 Winged helix DNA-binding domain superfamily RAM_07680 IPR000524 Transcription regulator HTH, GntR RAM_07685 IPR001851 ABC transporter, permease RAM_07690 IPR017871 ABC transporter, conserved site RAM_07690 IPR003439 ABC transporter-like RAM_07690 IPR003593 AAA+ ATPase domain RAM_07690 IPR015861 ABC transporter, ribose import, RbsA RAM_07690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_07695 IPR028082 Periplasmic binding protein-like I RAM_07695 IPR025997 Periplasmic binding protein RAM_07730 IPR025997 Periplasmic binding protein RAM_07730 IPR028082 Periplasmic binding protein-like I RAM_07740 IPR010905 Glycosyl hydrolase, family 88 RAM_07740 IPR008928 Six-hairpin glycosidase superfamily RAM_07740 IPR012341 Six-hairpin glycosidase-like superfamily RAM_07765 IPR038607 PhoD-like superfamily RAM_07765 IPR018946 Alkaline phosphatase D-related RAM_07765 IPR032093 Phospholipase D, N-terminal RAM_07765 IPR008963 Purple acid phosphatase-like, N-terminal RAM_07770 IPR006626 Parallel beta-helix repeat RAM_07770 IPR011049 Serralysin-like metalloprotease, C-terminal RAM_07770 IPR006633 Carbohydrate-binding/sugar hydrolysis domain RAM_07770 IPR018511 Hemolysin-type calcium-binding conserved site RAM_07770 IPR011050 Pectin lyase fold/virulence factor RAM_07770 IPR001343 RTX calcium-binding nonapeptide repeat RAM_07770 IPR012334 Pectin lyase fold RAM_07770 IPR024535 Pectate lyase superfamily protein RAM_07770 IPR039448 Right handed beta helix domain RAM_07775 IPR008928 Six-hairpin glycosidase superfamily RAM_07775 IPR012341 Six-hairpin glycosidase-like superfamily RAM_07775 IPR010905 Glycosyl hydrolase, family 88 RAM_07785 IPR008928 Six-hairpin glycosidase superfamily RAM_07785 IPR001661 Glycoside hydrolase, family 37 RAM_07785 IPR012341 Six-hairpin glycosidase-like superfamily RAM_07790 IPR000600 ROK family RAM_07790 IPR004654 Glucokinase ROK RAM_07800 IPR003594 Histidine kinase/HSP90-like ATPase RAM_07800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_07800 IPR017171 Signal transduction histidine kinase, MctS RAM_07800 IPR033480 Single Cache domain 2 RAM_07800 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_07810 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_07810 IPR036291 NAD(P)-binding domain superfamily RAM_07810 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_07815 IPR042119 QueA, domain 2 RAM_07815 IPR042118 QueA, domain 1 RAM_07815 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA RAM_07815 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily RAM_07830 IPR015859 ABC transporter, taurine import, TauD RAM_07830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_07830 IPR003593 AAA+ ATPase domain RAM_07830 IPR017871 ABC transporter, conserved site RAM_07830 IPR003439 ABC transporter-like RAM_07835 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_07835 IPR035906 MetI-like superfamily RAM_07850 IPR014014 RNA helicase, DEAD-box type, Q motif RAM_07850 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RAM_07850 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_07850 IPR011545 DEAD/DEAH box helicase domain RAM_07850 IPR028622 ATP-dependent RNA helicase RhlE RAM_07850 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_07850 IPR001650 Helicase, C-terminal RAM_07875 IPR012337 Ribonuclease H-like superfamily RAM_07875 IPR006641 YqgF/RNase H-like domain RAM_07875 IPR037027 YqgF/RNase H-like domain superfamily RAM_07875 IPR032639 Tex protein, YqgF-like domain RAM_07875 IPR012340 Nucleic acid-binding, OB-fold RAM_07875 IPR010994 RuvA domain 2-like RAM_07875 IPR022967 RNA-binding domain, S1 RAM_07875 IPR023319 Tex-like protein, HTH domain superfamily RAM_07875 IPR003029 S1 domain RAM_07875 IPR018974 Tex-like protein, N-terminal RAM_07875 IPR023323 Tex-like domain superfamily RAM_07875 IPR041692 HHH domain 9 RAM_07880 IPR003961 Fibronectin type III RAM_07880 IPR036116 Fibronectin type III superfamily RAM_07880 IPR017853 Glycoside hydrolase superfamily RAM_07880 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_07880 IPR001579 Glycoside hydrolase, chitinase active site RAM_07880 IPR013783 Immunoglobulin-like fold RAM_07880 IPR011583 Chitinase II RAM_07880 IPR008979 Galactose-binding-like domain superfamily RAM_07880 IPR003305 Carbohydrate-binding, CenC-like RAM_07885 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_07885 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RAM_07890 IPR020946 Flavin monooxygenase-like RAM_07890 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_07895 IPR020946 Flavin monooxygenase-like RAM_07895 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_07905 IPR020449 Transcription regulator HTH, AraC- type RAM_07905 IPR009057 Homeobox-like domain superfamily RAM_07905 IPR018060 DNA binding HTH domain, AraC-type RAM_07905 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal RAM_07925 IPR001647 DNA-binding HTH domain, TetR-type RAM_07925 IPR041646 IcaR, C-terminal RAM_07925 IPR009057 Homeobox-like domain superfamily RAM_07940 IPR016161 Aldehyde/histidinol dehydrogenase RAM_07940 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_07940 IPR015590 Aldehyde dehydrogenase domain RAM_07940 IPR029069 HotDog domain superfamily RAM_07940 IPR002539 MaoC-like dehydratase domain RAM_07940 IPR011966 Phenylacetic acid degradation protein PaaN RAM_07940 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_07945 IPR012347 Ferritin-like RAM_07945 IPR009078 Ferritin-like superfamily RAM_07945 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C RAM_07945 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A RAM_07950 IPR009359 Phenylacetic acid degradation B RAM_07950 IPR038693 Phenylacetyl-CoA epoxidase, subunit B RAM_07955 IPR009078 Ferritin-like superfamily RAM_07955 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C RAM_07955 IPR012347 Ferritin-like RAM_07955 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C RAM_07960 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit RAM_07960 IPR002744 MIP18 family-like RAM_07960 IPR034904 Fe-S cluster assembly domain superfamily RAM_07965 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RAM_07965 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RAM_07965 IPR012675 Beta-grasp domain superfamily RAM_07965 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_07965 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_07965 IPR001433 Oxidoreductase FAD/NAD(P)-binding RAM_07965 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_07965 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_07965 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_07965 IPR017938 Riboflavin synthase-like beta-barrel RAM_07965 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit RAM_07980 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase RAM_07980 IPR029787 Nucleotide cyclase RAM_07980 IPR032026 Adenylate cyclase regulatory domain RAM_07985 IPR006015 Universal stress protein A family RAM_07985 IPR006016 UspA RAM_07985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_08015 IPR002155 Thiolase RAM_08015 IPR020615 Thiolase, acyl-enzyme intermediate active site RAM_08015 IPR020617 Thiolase, C-terminal RAM_08015 IPR020610 Thiolase, active site RAM_08015 IPR020616 Thiolase, N-terminal RAM_08015 IPR016039 Thiolase-like RAM_08015 IPR020613 Thiolase, conserved site RAM_08020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_08020 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB RAM_08025 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RAM_08025 IPR029000 Cyclophilin-like domain superfamily RAM_08030 IPR036390 Winged helix DNA-binding domain superfamily RAM_08030 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_08030 IPR004839 Aminotransferase, class I/classII RAM_08030 IPR000524 Transcription regulator HTH, GntR RAM_08030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_08030 IPR015424 Pyridoxal phosphate-dependent transferase RAM_08035 IPR004675 Alkylhydroperoxidase AhpD core RAM_08035 IPR003779 Carboxymuconolactone decarboxylase-like RAM_08035 IPR029032 AhpD-like RAM_08040 IPR039556 ICL/PEPM domain RAM_08040 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site RAM_08040 IPR012695 2-methylisocitrate lyase RAM_08040 IPR040442 Pyruvate kinase-like domain superfamily RAM_08040 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RAM_08045 IPR001734 Sodium/solute symporter RAM_08045 IPR038377 Sodium/glucose symporter superfamily RAM_08055 IPR038377 Sodium/glucose symporter superfamily RAM_08055 IPR001734 Sodium/solute symporter RAM_08055 IPR018212 Sodium/solute symporter, conserved site RAM_08065 IPR011006 CheY-like superfamily RAM_08065 IPR007492 LytTR DNA-binding domain RAM_08065 IPR001789 Signal transduction response regulator, receiver domain RAM_08070 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region RAM_08070 IPR010559 Signal transduction histidine kinase, internal region RAM_08070 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_08070 IPR003018 GAF domain RAM_08080 IPR025997 Periplasmic binding protein RAM_08080 IPR028082 Periplasmic binding protein-like I RAM_08085 IPR001851 ABC transporter, permease RAM_08090 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_08090 IPR003439 ABC transporter-like RAM_08090 IPR003593 AAA+ ATPase domain RAM_08100 IPR006377 Catabolite control protein A RAM_08100 IPR000843 LacI-type HTH domain RAM_08100 IPR028082 Periplasmic binding protein-like I RAM_08100 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_08105 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_08105 IPR008928 Six-hairpin glycosidase superfamily RAM_08105 IPR005887 Alpha-1,2-mannosidase, putative RAM_08105 IPR041371 Glycosyl hydrolase family 92 N-terminal domain RAM_08105 IPR012939 Glycosyl hydrolase family 92 RAM_08110 IPR008928 Six-hairpin glycosidase superfamily RAM_08110 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_08110 IPR041371 Glycosyl hydrolase family 92 N-terminal domain RAM_08110 IPR012939 Glycosyl hydrolase family 92 RAM_08110 IPR005887 Alpha-1,2-mannosidase, putative RAM_08120 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_08120 IPR000835 MarR-type HTH domain RAM_08120 IPR036390 Winged helix DNA-binding domain superfamily RAM_08125 IPR029756 MTH1187/YkoF-like RAM_08125 IPR002767 Thiamine-binding protein RAM_08135 IPR013766 Thioredoxin domain RAM_08135 IPR036249 Thioredoxin-like superfamily RAM_08135 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_08145 IPR011834 Alpha-glucan phosphorylase RAM_08145 IPR035090 Phosphorylase pyridoxal-phosphate attachment site RAM_08145 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 RAM_08145 IPR000811 Glycosyl transferase, family 35 RAM_08170 IPR011251 Luciferase-like domain RAM_08170 IPR036661 Luciferase-like domain superfamily RAM_08170 IPR019914 Pyrimidine monooxygenase RutA RAM_08190 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_08190 IPR003439 ABC transporter-like RAM_08190 IPR003593 AAA+ ATPase domain RAM_08190 IPR017871 ABC transporter, conserved site RAM_08195 IPR001753 Enoyl-CoA hydratase/isomerase RAM_08195 IPR029045 ClpP/crotonase-like domain superfamily RAM_08200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_08200 IPR023576 UbiE/COQ5 methyltransferase, conserved site RAM_08200 IPR004033 UbiE/COQ5 methyltransferase RAM_08205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_08205 IPR041497 THUMP-like domain RAM_08215 IPR036390 Winged helix DNA-binding domain superfamily RAM_08215 IPR000847 Transcription regulator HTH, LysR RAM_08215 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_08215 IPR005119 LysR, substrate-binding RAM_08220 IPR003610 Carbohydrate-binding module family 5/12 RAM_08220 IPR036573 Carbohydrate-binding module superfamily 5/12 RAM_08220 IPR017853 Glycoside hydrolase superfamily RAM_08230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_08230 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_08230 IPR036390 Winged helix DNA-binding domain superfamily RAM_08230 IPR000524 Transcription regulator HTH, GntR RAM_08230 IPR004839 Aminotransferase, class I/classII RAM_08230 IPR015424 Pyridoxal phosphate-dependent transferase RAM_08240 IPR002938 FAD-binding domain RAM_08240 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_08265 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_08265 IPR023210 NADP-dependent oxidoreductase domain RAM_08270 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_08270 IPR002938 FAD-binding domain RAM_08275 IPR038765 Papain-like cysteine peptidase superfamily RAM_08275 IPR000064 Endopeptidase, NLPC/P60 domain RAM_08280 IPR036452 Ribonucleoside hydrolase-like RAM_08280 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site RAM_08280 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA RAM_08280 IPR023186 Inosine/uridine-preferring nucleoside hydrolase RAM_08280 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RAM_08285 IPR011004 Trimeric LpxA-like superfamily RAM_08285 IPR001451 Hexapeptide repeat RAM_08300 IPR011820 L-threonine dehydratase biosynthetic IlvA RAM_08300 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RAM_08300 IPR001721 Threonine dehydratase, ACT-like domain RAM_08300 IPR038110 Threonine dehydratase, ACT-like domain superfamily RAM_08300 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_08300 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_08315 IPR001387 Cro/C1-type helix-turn-helix domain RAM_08315 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_08315 IPR018653 Domain of unknown function DUF2083,transcriptional regulator RAM_08315 IPR026281 HTH-type transcriptional regulator RamB RAM_08315 IPR010359 IrrE N-terminal-like domain RAM_08320 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site RAM_08320 IPR040442 Pyruvate kinase-like domain superfamily RAM_08320 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RAM_08320 IPR006254 Isocitrate lyase RAM_08365 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_08365 IPR001296 Glycosyl transferase, family 1 RAM_08370 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_08370 IPR006101 Glycoside hydrolase, family 2 RAM_08370 IPR008979 Galactose-binding-like domain superfamily RAM_08370 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_08370 IPR023230 Glycoside hydrolase, family 2, conserved site RAM_08370 IPR017853 Glycoside hydrolase superfamily RAM_08370 IPR013783 Immunoglobulin-like fold RAM_08370 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_08370 IPR023232 Glycoside hydrolase, family 2, active site RAM_08370 IPR006103 Glycoside hydrolase family 2, catalytic domain RAM_08375 IPR029759 Glutathione peroxidase active site RAM_08375 IPR033674 Thioredoxin/glutathione peroxidase BtuE RAM_08375 IPR000889 Glutathione peroxidase RAM_08375 IPR036249 Thioredoxin-like superfamily RAM_08375 IPR029760 Glutathione peroxidase conserved site RAM_08380 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily RAM_08380 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RAM_08380 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily RAM_08380 IPR015293 Domain of unknown function DUF1957 RAM_08380 IPR004300 Glycoside hydrolase family 57, N-terminal domain RAM_08380 IPR040042 1,4-alpha-glucan branching enzyme MT3115-like RAM_08380 IPR037090 Glycoside hydrolase families 57, central domain RAM_08385 IPR013216 Methyltransferase type 11 RAM_08385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_08395 IPR003797 DegV RAM_08400 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site RAM_08400 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RAM_08400 IPR012255 Electron transfer flavoprotein, beta subunit RAM_08400 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal RAM_08400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_08405 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal RAM_08405 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal RAM_08405 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site RAM_08405 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal RAM_08405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_08405 IPR001308 Electron transfer flavoprotein alpha subunit/FixB RAM_08405 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_08425 IPR016032 Signal transduction response regulator, C-terminal effector RAM_08425 IPR011006 CheY-like superfamily RAM_08425 IPR000792 Transcription regulator LuxR, C-terminal RAM_08425 IPR001789 Signal transduction response regulator, receiver domain RAM_08430 IPR036259 MFS transporter superfamily RAM_08430 IPR020846 Major facilitator superfamily domain RAM_08430 IPR011701 Major facilitator superfamily RAM_08430 IPR023697 Multidrug resistance protein MdtL RAM_08435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_08435 IPR016454 Cysteine desulfurase RAM_08435 IPR000192 Aminotransferase class V domain RAM_08435 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_08435 IPR015424 Pyridoxal phosphate-dependent transferase RAM_08440 IPR004506 tRNA-specific 2-thiouridylase RAM_08440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_08440 IPR023382 Adenine nucleotide alpha hydrolase-like domains RAM_08460 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_08460 IPR001279 Metallo-beta-lactamase RAM_08480 IPR004150 NAD-dependent DNA ligase, OB-fold RAM_08480 IPR001357 BRCT domain RAM_08480 IPR010994 RuvA domain 2-like RAM_08480 IPR012340 Nucleic acid-binding, OB-fold RAM_08480 IPR036420 BRCT domain superfamily RAM_08480 IPR013839 NAD-dependent DNA ligase, adenylation RAM_08480 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type RAM_08480 IPR041663 DisA/LigA, helix-hairpin-helix motif RAM_08480 IPR018239 NAD-dependent DNA ligase, active site RAM_08480 IPR001679 NAD-dependent DNA ligase RAM_08480 IPR033136 NAD-dependent DNA ligase, conserved site RAM_08480 IPR013840 NAD-dependent DNA ligase, N-terminal RAM_08495 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C RAM_08495 IPR003837 Glu-tRNAGln amidotransferase C subunit RAM_08500 IPR020556 Amidase, conserved site RAM_08500 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RAM_08500 IPR023631 Amidase signature domain RAM_08500 IPR000120 Amidase RAM_08500 IPR036928 Amidase signature (AS) superfamily RAM_08505 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E RAM_08505 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic RAM_08505 IPR018027 Asn/Gln amidotransferase RAM_08505 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_08505 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like RAM_08505 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 RAM_08505 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 RAM_08505 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site RAM_08505 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit RAM_08530 IPR000683 Oxidoreductase, N-terminal RAM_08530 IPR036291 NAD(P)-binding domain superfamily RAM_08530 IPR004104 Oxidoreductase, C-terminal RAM_08540 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RAM_08540 IPR036291 NAD(P)-binding domain superfamily RAM_08540 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RAM_08540 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RAM_08540 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RAM_08550 IPR037237 IlvD/EDD, N-terminal domain RAM_08550 IPR042096 Dihydroxy-acid dehydratase, C-terminal RAM_08550 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RAM_08550 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RAM_08550 IPR004404 Dihydroxy-acid dehydratase RAM_08560 IPR012846 Acetolactate synthase, large subunit, biosynthetic RAM_08560 IPR039368 Acetolactate synthase large subunit, TPP binding domain RAM_08560 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_08560 IPR029061 Thiamin diphosphate-binding fold RAM_08560 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_08560 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_08560 IPR000399 TPP-binding enzyme, conserved site RAM_08560 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_08565 IPR004789 Acetolactate synthase, small subunit RAM_08565 IPR039557 AHAS, ACT domain RAM_08565 IPR002912 ACT domain RAM_08565 IPR019455 Acetolactate synthase, small subunit, C-terminal RAM_08565 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal RAM_08570 IPR036291 NAD(P)-binding domain superfamily RAM_08570 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_08570 IPR013023 Ketol-acid reductoisomerase RAM_08570 IPR000506 Ketol-acid reductoisomerase, C-terminal RAM_08570 IPR013116 Ketol-acid reductoisomerase, N-terminal RAM_08570 IPR014359 Ketol-acid reductoisomerase, prokaryotic RAM_08600 IPR009057 Homeobox-like domain superfamily RAM_08600 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_08600 IPR001647 DNA-binding HTH domain, TetR-type RAM_08605 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RAM_08605 IPR036291 NAD(P)-binding domain superfamily RAM_08605 IPR029009 Allosteric substrate binding domain superfamily RAM_08605 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RAM_08605 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RAM_08605 IPR002912 ACT domain RAM_08605 IPR006236 D-3-phosphoglycerate dehydrogenase RAM_08605 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RAM_08610 IPR023828 Peptidase S8, subtilisin, Ser-active site RAM_08610 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily RAM_08610 IPR034213 Vpr-like peptidase, catalytic domain RAM_08610 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 RAM_08610 IPR015500 Peptidase S8, subtilisin-related RAM_08610 IPR022398 Peptidase S8, subtilisin, His-active site RAM_08610 IPR036852 Peptidase S8/S53 domain superfamily RAM_08610 IPR023827 Peptidase S8, subtilisin, Asp-active site RAM_08610 IPR000209 Peptidase S8/S53 domain RAM_08610 IPR003137 PA domain RAM_08610 IPR025965 FlgD Ig-like domain RAM_08615 IPR023698 3-isopropylmalate dehydrogenase RAM_08615 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RAM_08615 IPR024084 Isopropylmalate dehydrogenase-like domain RAM_08620 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RAM_08620 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RAM_08620 IPR013785 Aldolase-type TIM barrel RAM_08620 IPR005675 Citramalate synthase RAM_08620 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily RAM_08620 IPR000891 Pyruvate carboxyltransferase RAM_08625 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily RAM_08625 IPR011234 Fumarylacetoacetase-like, C-terminal RAM_08630 IPR002938 FAD-binding domain RAM_08630 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_08640 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily RAM_08640 IPR020816 Histone-like DNA-binding protein, conserved site RAM_08640 IPR000119 Histone-like DNA-binding protein RAM_08645 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_08645 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_08645 IPR005158 Bacterial transcriptional activator domain RAM_08645 IPR002182 NB-ARC RAM_08645 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_08645 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_08645 IPR016032 Signal transduction response regulator, C-terminal effector RAM_08645 IPR013026 Tetratricopeptide repeat-containing domain RAM_08645 IPR019734 Tetratricopeptide repeat RAM_08690 IPR024412 Lsr2 RAM_08690 IPR042261 Lsr2, dimerization domain RAM_08690 IPR042254 Lsr2, DNA binding domain RAM_08700 IPR000119 Histone-like DNA-binding protein RAM_08700 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily RAM_08700 IPR020816 Histone-like DNA-binding protein, conserved site RAM_08710 IPR004593 Nuclease SbcCD subunit D RAM_08710 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RAM_08710 IPR029052 Metallo-dependent phosphatase-like RAM_08710 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain RAM_08710 IPR026843 Nuclease SbcCD subunit D, C-terminal domain RAM_08715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_08715 IPR038729 Rad50/SbcC-type AAA domain RAM_08745 IPR036390 Winged helix DNA-binding domain superfamily RAM_08745 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_08745 IPR029016 GAF-like domain superfamily RAM_08745 IPR014757 Transcription regulator IclR, C-terminal RAM_08745 IPR005471 Transcription regulator IclR, N-terminal RAM_08750 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RAM_08750 IPR033941 3-Isopropylmalate dehydratase, catalytic domain RAM_08750 IPR036008 Aconitase, iron-sulfur domain RAM_08750 IPR004430 3-isopropylmalate dehydratase, large subunit RAM_08750 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RAM_08750 IPR018136 Aconitase family, 4Fe-4S cluster binding site RAM_08755 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain RAM_08755 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RAM_08755 IPR033940 3-isopropylmalate dehydratase, swivel domain RAM_08755 IPR004431 3-isopropylmalate dehydratase, small subunit RAM_08760 IPR000119 Histone-like DNA-binding protein RAM_08760 IPR020816 Histone-like DNA-binding protein, conserved site RAM_08760 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily RAM_08765 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_08765 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_08765 IPR002182 NB-ARC RAM_08765 IPR005158 Bacterial transcriptional activator domain RAM_08765 IPR013026 Tetratricopeptide repeat-containing domain RAM_08765 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_08765 IPR019734 Tetratricopeptide repeat RAM_08765 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_08765 IPR016032 Signal transduction response regulator, C-terminal effector RAM_08770 IPR020084 NUDIX hydrolase, conserved site RAM_08770 IPR020476 NUDIX hydrolase RAM_08770 IPR015797 NUDIX hydrolase-like domain superfamily RAM_08770 IPR000086 NUDIX hydrolase domain RAM_08770 IPR029033 Histidine phosphatase superfamily RAM_08770 IPR013078 Histidine phosphatase superfamily, clade-1 RAM_08775 IPR025198 Polyphosphate kinase N-terminal domain RAM_08775 IPR036830 Polyphosphate kinase middle domain superfamily RAM_08775 IPR024953 Polyphosphate kinase middle domain RAM_08775 IPR041108 Polyphosphate kinase, C-terminal domain 1 RAM_08775 IPR003414 Polyphosphate kinase RAM_08775 IPR036832 Polyphosphate kinase N-terminal domain superfamily RAM_08775 IPR025200 Polyphosphate kinase C-terminal domain 2 RAM_08790 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_08790 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal RAM_08790 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal RAM_08790 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_08790 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent RAM_08790 IPR036291 NAD(P)-binding domain superfamily RAM_08800 IPR037152 L-asparaginase, N-terminal domain superfamily RAM_08800 IPR004550 L-asparaginase, type II RAM_08800 IPR036152 Asparaginase/glutaminase-like superfamily RAM_08800 IPR006034 Asparaginase/glutaminase-like RAM_08800 IPR027473 L-asparaginase, C-terminal RAM_08800 IPR020827 Asparaginase/glutaminase, active site 1 RAM_08800 IPR027475 Asparaginase/glutaminase, active site 2 RAM_08800 IPR040919 Asparaginase/glutaminase, C-terminal RAM_08800 IPR027474 L-asparaginase, N-terminal RAM_08810 IPR042159 Flavin-trafficking protein ApbE RAM_08810 IPR003374 ApbE-like superfamily RAM_08810 IPR024932 Flavin transferase ApbE RAM_08820 IPR001433 Oxidoreductase FAD/NAD(P)-binding RAM_08820 IPR017938 Riboflavin synthase-like beta-barrel RAM_08820 IPR000951 Phthalate dioxygenase reductase RAM_08820 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_08820 IPR012675 Beta-grasp domain superfamily RAM_08820 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_08820 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_08820 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_08820 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_08825 IPR039420 Transcriptional regulatory protein WalR-like RAM_08825 IPR011006 CheY-like superfamily RAM_08825 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_08825 IPR001789 Signal transduction response regulator, receiver domain RAM_08825 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_08830 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_08830 IPR005467 Histidine kinase domain RAM_08830 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_08830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_08830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_08830 IPR003594 Histidine kinase/HSP90-like ATPase RAM_08830 IPR003660 HAMP domain RAM_08840 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_08840 IPR015424 Pyridoxal phosphate-dependent transferase RAM_08840 IPR036390 Winged helix DNA-binding domain superfamily RAM_08840 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_08840 IPR000524 Transcription regulator HTH, GntR RAM_08845 IPR011095 D-alanine--D-alanine ligase, C-terminal RAM_08845 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RAM_08845 IPR016185 Pre-ATP-grasp domain superfamily RAM_08845 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RAM_08845 IPR005905 D-alanine--D-alanine ligase RAM_08845 IPR013815 ATP-grasp fold, subdomain 1 RAM_08845 IPR011761 ATP-grasp fold RAM_08860 IPR016188 PurM-like, N-terminal domain RAM_08860 IPR010918 PurM-like, C-terminal domain RAM_08860 IPR036921 PurM-like, N-terminal domain superfamily RAM_08860 IPR036676 PurM-like, C-terminal domain superfamily RAM_08860 IPR006283 Thiamine-monophosphate kinase RAM_08870 IPR013785 Aldolase-type TIM barrel RAM_08870 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain RAM_08870 IPR002241 Glycoside hydrolase, family 27 RAM_08870 IPR013780 Glycosyl hydrolase, all-beta RAM_08870 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_08870 IPR017853 Glycoside hydrolase superfamily RAM_08875 IPR011004 Trimeric LpxA-like superfamily RAM_08875 IPR001451 Hexapeptide repeat RAM_08880 IPR002043 Uracil-DNA glycosylase family 1 RAM_08880 IPR018085 Uracil-DNA glycosylase, active site RAM_08880 IPR005122 Uracil-DNA glycosylase-like RAM_08880 IPR036895 Uracil-DNA glycosylase-like domain superfamily RAM_08890 IPR034704 L28p-like RAM_08890 IPR026569 Ribosomal protein L28/L24 RAM_08890 IPR001383 Ribosomal protein L28 RAM_08890 IPR037147 Ribosomal protein L28/L24 superfamily RAM_08895 IPR033470 Uncharacterised protein, DhaK domain RAM_08895 IPR036117 DhaL domain superfamily RAM_08895 IPR019986 DAK2 domain-containing protein YloV RAM_08895 IPR004007 DhaL domain RAM_08900 IPR011545 DEAD/DEAH box helicase domain RAM_08900 IPR004609 ATP-dependent DNA helicase RecG RAM_08900 IPR001650 Helicase, C-terminal RAM_08900 IPR012340 Nucleic acid-binding, OB-fold RAM_08900 IPR033454 RecG, wedge domain RAM_08900 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_08900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_08915 IPR029057 Phosphoribosyltransferase-like RAM_08915 IPR000836 Phosphoribosyltransferase domain RAM_08915 IPR007815 Erythromycin esterase RAM_08925 IPR036852 Peptidase S8/S53 domain superfamily RAM_08925 IPR034193 Proteinase K-like catalytic domain RAM_08925 IPR007280 Peptidase, C-terminal, archaeal/bacterial RAM_08925 IPR000209 Peptidase S8/S53 domain RAM_08925 IPR023827 Peptidase S8, subtilisin, Asp-active site RAM_08925 IPR022398 Peptidase S8, subtilisin, His-active site RAM_08925 IPR023828 Peptidase S8, subtilisin, Ser-active site RAM_08925 IPR015500 Peptidase S8, subtilisin-related RAM_08925 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 RAM_08925 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily RAM_08930 IPR032806 H repeat-associated protein, N-terminal RAM_08930 IPR002559 Transposase, IS4-like RAM_08940 IPR011764 Biotin carboxylation domain RAM_08940 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RAM_08940 IPR011761 ATP-grasp fold RAM_08940 IPR016185 Pre-ATP-grasp domain superfamily RAM_08940 IPR000891 Pyruvate carboxyltransferase RAM_08940 IPR000089 Biotin/lipoyl attachment RAM_08940 IPR011053 Single hybrid motif RAM_08940 IPR005930 Pyruvate carboxylase RAM_08940 IPR005482 Biotin carboxylase, C-terminal RAM_08940 IPR013785 Aldolase-type TIM barrel RAM_08940 IPR005481 Biotin carboxylase-like, N-terminal domain RAM_08940 IPR011054 Rudiment single hybrid motif RAM_08940 IPR003379 Carboxylase, conserved domain RAM_08945 IPR023696 Ureohydrolase domain superfamily RAM_08945 IPR014033 Arginase RAM_08945 IPR006035 Ureohydrolase RAM_08945 IPR020855 Ureohydrolase, manganese-binding site RAM_09010 IPR003399 Mce/MlaD RAM_09010 IPR005693 Virulence factor Mce protein RAM_09035 IPR030802 ABC transporter permease MalE RAM_09035 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RAM_09045 IPR019949 Luciferase family oxidoreductase, group 1 RAM_09045 IPR036661 Luciferase-like domain superfamily RAM_09045 IPR011251 Luciferase-like domain RAM_09050 IPR002938 FAD-binding domain RAM_09050 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_09060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09060 IPR003593 AAA+ ATPase domain RAM_09060 IPR001943 UVR domain RAM_09060 IPR041546 ClpA/ClpB, AAA lid domain RAM_09060 IPR003959 ATPase, AAA-type, core RAM_09060 IPR001270 ClpA/B family RAM_09060 IPR004176 Clp, N-terminal RAM_09060 IPR018368 ClpA/B, conserved site 1 RAM_09060 IPR019489 Clp ATPase, C-terminal RAM_09060 IPR036628 Clp, N-terminal domain superfamily RAM_09065 IPR017986 WD40-repeat-containing domain RAM_09065 IPR019775 WD40 repeat, conserved site RAM_09065 IPR036322 WD40-repeat-containing domain superfamily RAM_09065 IPR038765 Papain-like cysteine peptidase superfamily RAM_09065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09065 IPR020472 G-protein beta WD-40 repeat RAM_09065 IPR029030 Caspase-like domain superfamily RAM_09065 IPR015943 WD40/YVTN repeat-like-containing domain superfamily RAM_09065 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain RAM_09065 IPR001680 WD40 repeat RAM_09070 IPR000212 DNA helicase, UvrD/REP type RAM_09070 IPR027785 UvrD-like helicase C-terminal domain RAM_09070 IPR014016 UvrD-like helicase, ATP-binding domain RAM_09070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09075 IPR004398 RNA methyltransferase, RsmD RAM_09075 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RAM_09075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_09080 IPR004821 Cytidyltransferase-like domain RAM_09080 IPR001980 Phosphopantetheine adenylyltransferase RAM_09080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_09085 IPR016191 Ribonuclease/ribotoxin RAM_09085 IPR000026 Guanine-specific ribonuclease N1/T1/U2 RAM_09105 IPR003772 Large ribosomal RNA subunit accumulation protein YceD RAM_09110 IPR011332 Zinc-binding ribosomal protein RAM_09110 IPR002677 Ribosomal protein L32p RAM_09115 IPR036389 Ribonuclease III, endonuclease domain superfamily RAM_09115 IPR000999 Ribonuclease III domain RAM_09115 IPR011907 Ribonuclease III RAM_09115 IPR014720 Double-stranded RNA-binding domain RAM_09120 IPR011050 Pectin lyase fold/virulence factor RAM_09120 IPR039513 PL-6 family RAM_09120 IPR012334 Pectin lyase fold RAM_09125 IPR010979 Ribosomal protein S13-like, H2TH RAM_09125 IPR020629 Formamidopyrimidine-DNA glycosylase RAM_09125 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RAM_09125 IPR035937 MutM-like, N-terminal RAM_09125 IPR010663 Zinc finger, FPG/IleRS-type RAM_09125 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain RAM_09125 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type RAM_09145 IPR013658 SMP-30/Gluconolactonase/LRE-like region RAM_09145 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_09145 IPR005511 Senescence marker protein-30 (SMP-30) RAM_09145 IPR011042 Six-bladed beta-propeller, TolB-like RAM_09160 IPR000639 Epoxide hydrolase-like RAM_09160 IPR000073 Alpha/beta hydrolase fold-1 RAM_09160 IPR029058 Alpha/Beta hydrolase fold RAM_09170 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_09170 IPR036651 Glutamine synthetase, N-terminal domain superfamily RAM_09170 IPR008146 Glutamine synthetase, catalytic domain RAM_09175 IPR017926 Glutamine amidotransferase RAM_09175 IPR011697 Peptidase C26 RAM_09175 IPR029062 Class I glutamine amidotransferase-like RAM_09180 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RAM_09180 IPR015590 Aldehyde dehydrogenase domain RAM_09180 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_09180 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_09180 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_09180 IPR016161 Aldehyde/histidinol dehydrogenase RAM_09185 IPR036291 NAD(P)-binding domain superfamily RAM_09185 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_09200 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_09200 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_09200 IPR015424 Pyridoxal phosphate-dependent transferase RAM_09200 IPR020581 Glycine cleavage system P protein RAM_09200 IPR003437 Glycine dehydrogenase (decarboxylating) RAM_09205 IPR006223 Glycine cleavage system T protein RAM_09205 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RAM_09205 IPR006222 Aminomethyltransferase, folate-binding domain RAM_09205 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RAM_09205 IPR028896 Aminomethyltransferase-like RAM_09205 IPR022903 Glycine cleavage system T protein, bacteria RAM_09205 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal RAM_09210 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RAM_09210 IPR033753 Glycine cleavage system H-protein/Simiate RAM_09210 IPR017453 Glycine cleavage system H-protein, subgroup RAM_09210 IPR011053 Single hybrid motif RAM_09210 IPR002930 Glycine cleavage system H-protein RAM_09210 IPR000089 Biotin/lipoyl attachment RAM_09215 IPR015424 Pyridoxal phosphate-dependent transferase RAM_09215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_09215 IPR001085 Serine hydroxymethyltransferase RAM_09215 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RAM_09215 IPR039429 Serine hydroxymethyltransferase-like domain RAM_09215 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_09220 IPR006638 Elp3/MiaB/NifB RAM_09220 IPR031691 Lipoyl synthase, N-terminal RAM_09220 IPR013785 Aldolase-type TIM barrel RAM_09220 IPR007197 Radical SAM RAM_09220 IPR003698 Lipoyl synthase RAM_09225 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form RAM_09225 IPR029009 Allosteric substrate binding domain superfamily RAM_09225 IPR005131 Serine dehydratase beta chain RAM_09225 IPR005130 Serine dehydratase-like, alpha subunit RAM_09245 IPR036390 Winged helix DNA-binding domain superfamily RAM_09245 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_09245 IPR000524 Transcription regulator HTH, GntR RAM_09245 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_09245 IPR011711 GntR, C-terminal RAM_09255 IPR023346 Lysozyme-like domain superfamily RAM_09255 IPR001264 Glycosyl transferase, family 51 RAM_09255 IPR012338 Beta-lactamase/transpeptidase-like RAM_09255 IPR036950 Penicillin binding protein transglycosylase domain RAM_09255 IPR001460 Penicillin-binding protein, transpeptidase RAM_09260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_09260 IPR002935 Class I-like SAM-dependent O-methyltransferase RAM_09265 IPR036390 Winged helix DNA-binding domain superfamily RAM_09265 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_09265 IPR000524 Transcription regulator HTH, GntR RAM_09265 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_09265 IPR015424 Pyridoxal phosphate-dependent transferase RAM_09265 IPR004839 Aminotransferase, class I/classII RAM_09265 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_09270 IPR002938 FAD-binding domain RAM_09270 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_09280 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_09280 IPR036291 NAD(P)-binding domain superfamily RAM_09290 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_09290 IPR023753 FAD/NAD(P)-binding domain RAM_09290 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_09290 IPR028202 Reductase, C-terminal RAM_09295 IPR009061 Putative DNA-binding domain superfamily RAM_09295 IPR000551 MerR-type HTH domain RAM_09295 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain RAM_09295 IPR012925 TipAS antibiotic-recognition domain RAM_09305 IPR020846 Major facilitator superfamily domain RAM_09305 IPR011701 Major facilitator superfamily RAM_09305 IPR036259 MFS transporter superfamily RAM_09305 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RAM_09310 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily RAM_09310 IPR011234 Fumarylacetoacetase-like, C-terminal RAM_09315 IPR036849 Enolase-like, C-terminal domain superfamily RAM_09315 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_09315 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_09315 IPR034610 L-fuconate dehydratase RAM_09315 IPR029065 Enolase C-terminal domain-like RAM_09315 IPR029017 Enolase-like, N-terminal RAM_09320 IPR036291 NAD(P)-binding domain superfamily RAM_09320 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_09320 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_09330 IPR003439 ABC transporter-like RAM_09330 IPR017871 ABC transporter, conserved site RAM_09330 IPR015861 ABC transporter, ribose import, RbsA RAM_09330 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09330 IPR003593 AAA+ ATPase domain RAM_09335 IPR001851 ABC transporter, permease RAM_09340 IPR000524 Transcription regulator HTH, GntR RAM_09340 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_09340 IPR011711 GntR, C-terminal RAM_09340 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_09340 IPR036390 Winged helix DNA-binding domain superfamily RAM_09345 IPR023210 NADP-dependent oxidoreductase domain RAM_09345 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_09355 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_09355 IPR014284 RNA polymerase sigma-70 like domain RAM_09355 IPR039425 RNA polymerase sigma-70 like RAM_09355 IPR007627 RNA polymerase sigma-70 region 2 RAM_09355 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_09355 IPR013325 RNA polymerase sigma factor, region 2 RAM_09355 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_09355 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_09365 IPR003807 Domain of unknown function DUF202 RAM_09385 IPR018193 Glycerate kinase, flavodoxin-like fold RAM_09385 IPR004381 Glycerate kinase RAM_09385 IPR036129 Glycerate kinase superfamily RAM_09385 IPR018197 Glycerate kinase, restriction-enzyme-like fold RAM_09390 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RAM_09390 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RAM_09390 IPR036291 NAD(P)-binding domain superfamily RAM_09390 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RAM_09395 IPR031704 Glycosyl hydrolase family 36, N-terminal RAM_09395 IPR038417 Alpha-galactosidase, N-terminal domain superfamily RAM_09395 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_09395 IPR031705 Glycosyl hydrolase family 36, C-terminal RAM_09395 IPR013785 Aldolase-type TIM barrel RAM_09395 IPR017853 Glycoside hydrolase superfamily RAM_09395 IPR013780 Glycosyl hydrolase, all-beta RAM_09395 IPR002252 Glycoside hydrolase family 36 RAM_09400 IPR023945 N-acetylmannosamine kinase, bacterial RAM_09400 IPR000600 ROK family RAM_09405 IPR006059 Bacterial extracellular solute-binding protein RAM_09410 IPR035906 MetI-like superfamily RAM_09410 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_09415 IPR035906 MetI-like superfamily RAM_09415 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_09420 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_09420 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain RAM_09420 IPR013780 Glycosyl hydrolase, all-beta RAM_09420 IPR017853 Glycoside hydrolase superfamily RAM_09420 IPR013785 Aldolase-type TIM barrel RAM_09420 IPR002241 Glycoside hydrolase, family 27 RAM_09425 IPR037171 NagB/RpiA transferase-like RAM_09425 IPR004165 Coenzyme A transferase family I RAM_09430 IPR037171 NagB/RpiA transferase-like RAM_09430 IPR004165 Coenzyme A transferase family I RAM_09435 IPR020617 Thiolase, C-terminal RAM_09435 IPR012793 Beta-ketoadipyl CoA thiolase RAM_09435 IPR020616 Thiolase, N-terminal RAM_09435 IPR020613 Thiolase, conserved site RAM_09435 IPR020610 Thiolase, active site RAM_09435 IPR020615 Thiolase, acyl-enzyme intermediate active site RAM_09435 IPR002155 Thiolase RAM_09435 IPR016039 Thiolase-like RAM_09440 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal RAM_09440 IPR015889 Intradiol ring-cleavage dioxygenase, core RAM_09440 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal RAM_09440 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit RAM_09445 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal RAM_09445 IPR015889 Intradiol ring-cleavage dioxygenase, core RAM_09445 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit RAM_09450 IPR026968 3-oxoadipate enol-lactonase 1/2 RAM_09450 IPR022742 Serine aminopeptidase, S33 RAM_09450 IPR029058 Alpha/Beta hydrolase fold RAM_09450 IPR000073 Alpha/beta hydrolase fold-1 RAM_09455 IPR003779 Carboxymuconolactone decarboxylase-like RAM_09455 IPR029032 AhpD-like RAM_09460 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR RAM_09460 IPR029016 GAF-like domain superfamily RAM_09460 IPR014757 Transcription regulator IclR, C-terminal RAM_09460 IPR005471 Transcription regulator IclR, N-terminal RAM_09460 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_09460 IPR036390 Winged helix DNA-binding domain superfamily RAM_09465 IPR025877 MobA-like NTP transferase RAM_09465 IPR013482 Molybdenum cofactor guanylyltransferase RAM_09465 IPR029044 Nucleotide-diphospho-sugar transferases RAM_09470 IPR003959 ATPase, AAA-type, core RAM_09470 IPR027543 Lon protease, bacterial RAM_09470 IPR003593 AAA+ ATPase domain RAM_09470 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_09470 IPR008269 Peptidase S16, Lon proteolytic domain RAM_09470 IPR008268 Peptidase S16, active site RAM_09470 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_09470 IPR027065 Lon protease RAM_09470 IPR015947 PUA-like superfamily RAM_09470 IPR003111 Lon, substrate-binding domain RAM_09470 IPR004815 Lon protease, bacterial/eukaryotic-type RAM_09470 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09490 IPR002888 [2Fe-2S]-binding RAM_09490 IPR012675 Beta-grasp domain superfamily RAM_09490 IPR036884 [2Fe-2S]-binding domain superfamily RAM_09490 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_09490 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_09495 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RAM_09495 IPR012780 Carbon-monoxide dehydrogenase, large subunit RAM_09495 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RAM_09495 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RAM_09495 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RAM_09500 IPR036318 FAD-binding, type PCMH-like superfamily RAM_09500 IPR005107 CO dehydrogenase flavoprotein, C-terminal RAM_09500 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily RAM_09500 IPR016167 FAD-binding, type PCMH, subdomain 1 RAM_09500 IPR002346 Molybdopterin dehydrogenase, FAD-binding RAM_09500 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_09500 IPR016166 FAD-binding domain, PCMH-type RAM_09510 IPR013656 PAS fold-4 RAM_09510 IPR000014 PAS domain RAM_09510 IPR029787 Nucleotide cyclase RAM_09510 IPR035965 PAS domain superfamily RAM_09510 IPR000160 GGDEF domain RAM_09510 IPR000700 PAS-associated, C-terminal RAM_09515 IPR020946 Flavin monooxygenase-like RAM_09515 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_09520 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_09520 IPR023210 NADP-dependent oxidoreductase domain RAM_09520 IPR020471 Aldo/keto reductase RAM_09530 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RAM_09530 IPR029052 Metallo-dependent phosphatase-like RAM_09530 IPR039331 Purple acid phosphatase-like RAM_09545 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_09545 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes RAM_09545 IPR029061 Thiamin diphosphate-binding fold RAM_09545 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_09545 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_09545 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_09545 IPR000399 TPP-binding enzyme, conserved site RAM_09545 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase RAM_09550 IPR024203 5-deoxy-glucuronate isomerase, IolB RAM_09550 IPR023770 5-deoxy-glucuronate isomerase, Bacilli RAM_09550 IPR021120 KduI/IolB isomerase RAM_09550 IPR014710 RmlC-like jelly roll fold RAM_09550 IPR011051 RmlC-like cupin domain superfamily RAM_09560 IPR030830 5-Dehydro-2-deoxygluconokinase RAM_09560 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_09560 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily RAM_09560 IPR011611 Carbohydrate kinase PfkB RAM_09560 IPR029056 Ribokinase-like RAM_09560 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes RAM_09565 IPR003593 AAA+ ATPase domain RAM_09565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09565 IPR003439 ABC transporter-like RAM_09570 IPR001851 ABC transporter, permease RAM_09580 IPR030823 IolE/MocC family RAM_09580 IPR036237 Xylose isomerase-like superfamily RAM_09580 IPR013022 Xylose isomerase-like, TIM barrel domain RAM_09580 IPR023952 Inosose dehydratase RAM_09585 IPR028082 Periplasmic binding protein-like I RAM_09585 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_09585 IPR000843 LacI-type HTH domain RAM_09585 IPR023588 Transcription regulator HTH, PurR RAM_09590 IPR000683 Oxidoreductase, N-terminal RAM_09590 IPR004104 Oxidoreductase, C-terminal RAM_09590 IPR036291 NAD(P)-binding domain superfamily RAM_09595 IPR017932 Glutamine amidotransferase type 2 domain RAM_09595 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_09595 IPR006426 Asparagine synthase, glutamine-hydrolyzing RAM_09595 IPR033738 Asparagine synthase, N-terminal domain RAM_09595 IPR001962 Asparagine synthase RAM_09605 IPR004623 Potassium-transporting ATPase A chain RAM_09610 IPR036412 HAD-like superfamily RAM_09610 IPR018303 P-type ATPase, phosphorylation site RAM_09610 IPR023299 P-type ATPase, cytoplasmic domain N RAM_09610 IPR023214 HAD superfamily RAM_09610 IPR001757 P-type ATPase RAM_09610 IPR023298 P-type ATPase, transmembrane domain superfamily RAM_09610 IPR008250 P-type ATPase, A domain superfamily RAM_09610 IPR006391 P-type ATPase, B chain, subfamily IA RAM_09615 IPR003820 Potassium-transporting ATPase C chain RAM_09620 IPR038318 KdpD, transmembrane domain superfamily RAM_09620 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_09620 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_09620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09620 IPR005467 Histidine kinase domain RAM_09620 IPR006016 UspA RAM_09620 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal RAM_09620 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_09620 IPR003594 Histidine kinase/HSP90-like ATPase RAM_09620 IPR025201 Sensor protein KdpD, transmembrane domain RAM_09620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_09620 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_09625 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_09625 IPR011006 CheY-like superfamily RAM_09625 IPR001789 Signal transduction response regulator, receiver domain RAM_09625 IPR039420 Transcriptional regulatory protein WalR-like RAM_09625 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_09650 IPR036046 Acylphosphatase-like domain superfamily RAM_09650 IPR001792 Acylphosphatase-like domain RAM_09650 IPR017968 Acylphosphatase, conserved site RAM_09650 IPR020456 Acylphosphatase RAM_09655 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09655 IPR011890 Structural maintenance of chromosomes protein, prokaryotic RAM_09655 IPR036277 SMCs flexible hinge superfamily RAM_09655 IPR010935 SMCs flexible hinge RAM_09655 IPR024704 Structural maintenance of chromosomes protein RAM_09655 IPR003395 RecF/RecN/SMC, N-terminal RAM_09665 IPR001734 Sodium/solute symporter RAM_09665 IPR018212 Sodium/solute symporter, conserved site RAM_09665 IPR038377 Sodium/glucose symporter superfamily RAM_09670 IPR005338 Anhydro-N-acetylmuramic acid kinase RAM_09675 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RAM_09675 IPR036225 SRP/SRP receptor, N-terminal RAM_09675 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09675 IPR013822 Signal recognition particle SRP54, helical bundle RAM_09675 IPR003593 AAA+ ATPase domain RAM_09675 IPR004390 Signal-recognition particle receptor FtsY RAM_09675 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily RAM_09690 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_09690 IPR005471 Transcription regulator IclR, N-terminal RAM_09690 IPR036390 Winged helix DNA-binding domain superfamily RAM_09690 IPR014757 Transcription regulator IclR, C-terminal RAM_09690 IPR029016 GAF-like domain superfamily RAM_09720 IPR023954 C4-dicarboxylate transport protein RAM_09720 IPR001991 Sodium:dicarboxylate symporter RAM_09720 IPR036458 Sodium:dicarboxylate symporter superfamily RAM_09720 IPR018107 Sodium:dicarboxylate symporter, conserved site RAM_09730 IPR008599 Putative sugar diacid recognition RAM_09730 IPR041522 CdaR, GGDEF-like domain RAM_09730 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_09730 IPR025736 PucR C-terminal helix-turn-helix domain RAM_09735 IPR002346 Molybdopterin dehydrogenase, FAD-binding RAM_09735 IPR036318 FAD-binding, type PCMH-like superfamily RAM_09735 IPR016166 FAD-binding domain, PCMH-type RAM_09735 IPR005107 CO dehydrogenase flavoprotein, C-terminal RAM_09735 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily RAM_09735 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_09740 IPR002888 [2Fe-2S]-binding RAM_09740 IPR012675 Beta-grasp domain superfamily RAM_09740 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_09740 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_09740 IPR036884 [2Fe-2S]-binding domain superfamily RAM_09740 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_09745 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_09745 IPR032466 Metal-dependent hydrolase RAM_09745 IPR006680 Amidohydrolase-related RAM_09750 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RAM_09750 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RAM_09750 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RAM_09750 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RAM_09750 IPR017609 Xanthine dehydrogenase D subunit RAM_09755 IPR017853 Glycoside hydrolase superfamily RAM_09755 IPR013780 Glycosyl hydrolase, all-beta RAM_09755 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_09755 IPR013785 Aldolase-type TIM barrel RAM_09755 IPR002241 Glycoside hydrolase, family 27 RAM_09755 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain RAM_09760 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_09760 IPR001647 DNA-binding HTH domain, TetR-type RAM_09760 IPR009057 Homeobox-like domain superfamily RAM_09770 IPR019842 Uricase, conserved site RAM_09770 IPR002042 Uricase RAM_09775 IPR014306 Hydroxyisourate hydrolase RAM_09775 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily RAM_09775 IPR023416 Transthyretin/hydroxyisourate hydrolase domain RAM_09775 IPR000895 Transthyretin/hydroxyisourate hydrolase RAM_09775 IPR023418 Transthyretin, thyroxine binding site RAM_09775 IPR023419 Transthyretin, conserved site RAM_09790 IPR032466 Metal-dependent hydrolase RAM_09790 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_09790 IPR006680 Amidohydrolase-related RAM_09790 IPR017593 Allantoinase RAM_09795 IPR008979 Galactose-binding-like domain superfamily RAM_09795 IPR005164 Allantoicase RAM_09795 IPR015908 Allantoicase domain RAM_09805 IPR003781 CoA-binding RAM_09805 IPR036291 NAD(P)-binding domain superfamily RAM_09810 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_09810 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase RAM_09810 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RAM_09810 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_09810 IPR015424 Pyridoxal phosphate-dependent transferase RAM_09830 IPR014284 RNA polymerase sigma-70 like domain RAM_09830 IPR032710 NTF2-like domain superfamily RAM_09830 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_09830 IPR037401 SnoaL-like domain RAM_09830 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_09830 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_09830 IPR007627 RNA polymerase sigma-70 region 2 RAM_09830 IPR013325 RNA polymerase sigma factor, region 2 RAM_09840 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted RAM_09840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_09845 IPR029020 Ammonium/urea transporter RAM_09845 IPR001905 Ammonium transporter RAM_09845 IPR018047 Ammonium transporter, conserved site RAM_09845 IPR024041 Ammonium transporter AmtB-like domain RAM_09850 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RAM_09850 IPR011322 Nitrogen regulatory PII-like, alpha/beta RAM_09850 IPR017918 Nitrogen regulatory protein PII, conserved site RAM_09850 IPR002332 Nitrogen regulatory protein P-II, urydylation site RAM_09850 IPR002187 Nitrogen regulatory protein PII RAM_09855 IPR006674 HD domain RAM_09855 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme RAM_09855 IPR002912 ACT domain RAM_09855 IPR003607 HD/PDEase domain RAM_09855 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase RAM_09860 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_09860 IPR002938 FAD-binding domain RAM_09875 IPR000160 GGDEF domain RAM_09875 IPR029787 Nucleotide cyclase RAM_09875 IPR013656 PAS fold-4 RAM_09875 IPR035965 PAS domain superfamily RAM_09875 IPR000700 PAS-associated, C-terminal RAM_09875 IPR000014 PAS domain RAM_09880 IPR036291 NAD(P)-binding domain superfamily RAM_09880 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_09880 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_09885 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_09885 IPR009057 Homeobox-like domain superfamily RAM_09885 IPR001647 DNA-binding HTH domain, TetR-type RAM_09895 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RAM_09895 IPR006164 Ku70/Ku80 beta-barrel domain RAM_09895 IPR016194 SPOC-like, C-terminal domain superfamily RAM_09905 IPR011527 ABC transporter type 1, transmembrane domain RAM_09905 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_09905 IPR011917 ABC transporter, lipid A export, MsbA RAM_09905 IPR003593 AAA+ ATPase domain RAM_09905 IPR017871 ABC transporter, conserved site RAM_09905 IPR003439 ABC transporter-like RAM_09905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09905 IPR039421 Type I protein exporter RAM_09910 IPR003593 AAA+ ATPase domain RAM_09910 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09910 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily RAM_09910 IPR013822 Signal recognition particle SRP54, helical bundle RAM_09910 IPR004125 Signal recognition particle, SRP54 subunit, M-domain RAM_09910 IPR004780 Signal recognition particle protein RAM_09910 IPR022941 Signal recognition particle, SRP54 subunit RAM_09910 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RAM_09910 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily RAM_09915 IPR032466 Metal-dependent hydrolase RAM_09915 IPR006680 Amidohydrolase-related RAM_09930 IPR023803 Ribosomal protein S16 domain superfamily RAM_09930 IPR020592 Ribosomal protein S16, conserved site RAM_09930 IPR000307 Ribosomal protein S16 RAM_09935 IPR015946 K homology domain-like, alpha/beta RAM_09935 IPR009019 K homology domain superfamily, prokaryotic type RAM_09935 IPR020627 Uncharacterised protein family UPF0109 RAM_09940 IPR002676 RimM, N-terminal RAM_09940 IPR011033 PRC-barrel-like superfamily RAM_09940 IPR011961 16S rRNA processing protein RimM RAM_09940 IPR027275 PRC-barrel domain RAM_09940 IPR009000 Translation protein, beta-barrel domain superfamily RAM_09940 IPR036976 RimM, N-terminal domain superfamily RAM_09950 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain RAM_09950 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal RAM_09950 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria RAM_09950 IPR029028 Alpha/beta knot methyltransferases RAM_09950 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RAM_09955 IPR001857 Ribosomal protein L19 RAM_09955 IPR018257 Ribosomal protein L19, conserved site RAM_09955 IPR008991 Translation protein SH3-like domain superfamily RAM_09955 IPR038657 Ribosomal protein L19 superfamily RAM_09960 IPR019533 Peptidase S26 RAM_09960 IPR019756 Peptidase S26A, signal peptidase I, serine active site RAM_09960 IPR019758 Peptidase S26A, signal peptidase I, conserved site RAM_09960 IPR000223 Peptidase S26A, signal peptidase I RAM_09960 IPR036286 LexA/Signal peptidase-like superfamily RAM_09965 IPR036397 Ribonuclease H superfamily RAM_09965 IPR024567 Ribonuclease HII/HIII domain RAM_09965 IPR001352 Ribonuclease HII/HIII RAM_09965 IPR012337 Ribonuclease H-like superfamily RAM_09965 IPR022898 Ribonuclease HII RAM_09970 IPR019592 Protein of unknown function DUF2469 RAM_09975 IPR003509 Uncharacterised protein family UPF0102 RAM_09975 IPR011856 tRNA endonuclease-like domain superfamily RAM_09975 IPR011335 Restriction endonuclease type II-like RAM_09980 IPR003593 AAA+ ATPase domain RAM_09980 IPR004482 Mg chelatase-related protein RAM_09980 IPR000523 Magnesium chelatase ChlI domain RAM_09980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_09980 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_09980 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_09980 IPR025158 Mg chelatase-related protein, C-terminal domain RAM_09990 IPR041614 DprA, winged helix domain RAM_09990 IPR003488 DNA recombination-mediator protein A RAM_09995 IPR011010 DNA breaking-rejoining enzyme, catalytic core RAM_09995 IPR013762 Integrase-like, catalytic domain superfamily RAM_09995 IPR002104 Integrase, catalytic domain RAM_09995 IPR010998 Integrase/recombinase, N-terminal RAM_09995 IPR023009 Tyrosine recombinase XerC/XerD RAM_09995 IPR004107 Integrase, SAM-like, N-terminal RAM_10000 IPR000943 RNA polymerase sigma-70 RAM_10000 IPR014284 RNA polymerase sigma-70 like domain RAM_10000 IPR013325 RNA polymerase sigma factor, region 2 RAM_10000 IPR012845 RNA polymerase sigma factor, FliA/WhiG RAM_10000 IPR007630 RNA polymerase sigma-70 region 4 RAM_10000 IPR007624 RNA polymerase sigma-70 region 3 RAM_10000 IPR007627 RNA polymerase sigma-70 region 2 RAM_10000 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_10005 IPR016047 Peptidase M23 RAM_10005 IPR011055 Duplicated hybrid motif RAM_10010 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily RAM_10010 IPR018130 Ribosomal protein S2, conserved site RAM_10010 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid RAM_10010 IPR001865 Ribosomal protein S2 RAM_10015 IPR001816 Translation elongation factor EFTs/EF1B RAM_10015 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation RAM_10015 IPR018101 Translation elongation factor Ts, conserved site RAM_10015 IPR009060 UBA-like superfamily RAM_10015 IPR036402 Elongation factor Ts, dimerisation domain superfamily RAM_10020 IPR001048 Aspartate/glutamate/uridylate kinase RAM_10020 IPR011817 Uridylate kinase RAM_10020 IPR036393 Acetylglutamate kinase-like superfamily RAM_10020 IPR015963 Uridylate kinase, bacteria RAM_10025 IPR002661 Ribosome recycling factor RAM_10025 IPR023584 Ribosome recycling factor domain RAM_10025 IPR036191 RRF superfamily RAM_10030 IPR000374 Phosphatidate cytidylyltransferase RAM_10040 IPR026669 Arsenite methyltransferase-like RAM_10040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_10040 IPR036390 Winged helix DNA-binding domain superfamily RAM_10040 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_10040 IPR005149 Transcription regulator PadR, N-terminal RAM_10040 IPR025714 Methyltransferase domain RAM_10045 IPR011991 ArsR-like helix-turn-helix domain RAM_10045 IPR036390 Winged helix DNA-binding domain superfamily RAM_10045 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_10045 IPR005149 Transcription regulator PadR, N-terminal RAM_10050 IPR037294 ABC transporter, BtuC-like RAM_10050 IPR000522 ABC transporter, permease protein, BtuC-like RAM_10055 IPR000522 ABC transporter, permease protein, BtuC-like RAM_10055 IPR037294 ABC transporter, BtuC-like RAM_10060 IPR003439 ABC transporter-like RAM_10060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_10060 IPR017871 ABC transporter, conserved site RAM_10060 IPR003593 AAA+ ATPase domain RAM_10065 IPR002491 ABC transporter periplasmic binding domain RAM_10070 IPR020826 Transketolase binding site RAM_10070 IPR033248 Transketolase, C-terminal domain RAM_10070 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_10070 IPR029061 Thiamin diphosphate-binding fold RAM_10070 IPR005478 Transketolase, bacterial-like RAM_10070 IPR005475 Transketolase-like, pyrimidine-binding domain RAM_10070 IPR033247 Transketolase family RAM_10070 IPR005474 Transketolase, N-terminal RAM_10080 IPR013785 Aldolase-type TIM barrel RAM_10080 IPR027492 Dual-specificity RNA methyltransferase RlmN RAM_10080 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr RAM_10080 IPR007197 Radical SAM RAM_10080 IPR040072 Methyltransferase (Class A) RAM_10090 IPR031325 RHS repeat RAM_10090 IPR022385 Rhs repeat-associated core RAM_10090 IPR008979 Galactose-binding-like domain superfamily RAM_10090 IPR006530 YD repeat RAM_10105 IPR003785 Creatininase/formamide hydrolase RAM_10105 IPR031034 Creatinine amidohydrolase RAM_10105 IPR024087 Creatininase-like superfamily RAM_10110 IPR016164 FAD-linked oxidase-like, C-terminal RAM_10110 IPR006094 FAD linked oxidase, N-terminal RAM_10110 IPR004113 FAD-linked oxidase, C-terminal RAM_10110 IPR036318 FAD-binding, type PCMH-like superfamily RAM_10110 IPR016166 FAD-binding domain, PCMH-type RAM_10110 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RAM_10125 IPR003593 AAA+ ATPase domain RAM_10125 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_10125 IPR003439 ABC transporter-like RAM_10130 IPR013108 Amidohydrolase 3 RAM_10130 IPR032466 Metal-dependent hydrolase RAM_10130 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_10135 IPR001387 Cro/C1-type helix-turn-helix domain RAM_10135 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_10145 IPR032466 Metal-dependent hydrolase RAM_10145 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_10145 IPR023512 Deaminase MtaD/DadD RAM_10145 IPR006680 Amidohydrolase-related RAM_10180 IPR041930 Acetylene hydratase RAM_10180 IPR006657 Molybdopterin dinucleotide-binding domain RAM_10180 IPR037949 Acetylene hydratase, MopB domain RAM_10180 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_10180 IPR006656 Molybdopterin oxidoreductase RAM_10190 IPR000551 MerR-type HTH domain RAM_10190 IPR009061 Putative DNA-binding domain superfamily RAM_10195 IPR011701 Major facilitator superfamily RAM_10195 IPR004638 Drug resistance transporter EmrB-like RAM_10195 IPR005829 Sugar transporter, conserved site RAM_10195 IPR036259 MFS transporter superfamily RAM_10195 IPR020846 Major facilitator superfamily domain RAM_10210 IPR011008 Dimeric alpha-beta barrel RAM_10210 IPR005545 YCII-related RAM_10215 IPR036291 NAD(P)-binding domain superfamily RAM_10215 IPR008030 NmrA-like domain RAM_10225 IPR020843 Polyketide synthase, enoylreductase domain RAM_10225 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_10225 IPR020807 Polyketide synthase, dehydratase domain RAM_10225 IPR009081 Phosphopantetheine binding ACP domain RAM_10225 IPR006162 Phosphopantetheine attachment site RAM_10225 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_10225 IPR016039 Thiolase-like RAM_10225 IPR013968 Polyketide synthase, ketoreductase domain RAM_10225 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_10225 IPR015083 Polyketide synthase, docking domain RAM_10225 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_10225 IPR018201 Beta-ketoacyl synthase, active site RAM_10225 IPR011032 GroES-like superfamily RAM_10225 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_10225 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_10225 IPR036291 NAD(P)-binding domain superfamily RAM_10225 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_10225 IPR013154 Alcohol dehydrogenase, N-terminal RAM_10225 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_10225 IPR014043 Acyl transferase RAM_10225 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_10225 IPR036736 ACP-like superfamily RAM_10225 IPR001227 Acyl transferase domain superfamily RAM_10230 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_10230 IPR001387 Cro/C1-type helix-turn-helix domain RAM_10240 IPR005545 YCII-related RAM_10240 IPR011008 Dimeric alpha-beta barrel RAM_10245 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_10245 IPR013325 RNA polymerase sigma factor, region 2 RAM_10245 IPR007627 RNA polymerase sigma-70 region 2 RAM_10245 IPR014284 RNA polymerase sigma-70 like domain RAM_10245 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_10245 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_10245 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_10250 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_10250 IPR029045 ClpP/crotonase-like domain superfamily RAM_10250 IPR001753 Enoyl-CoA hydratase/isomerase RAM_10260 IPR006659 Arsenate reductase RAM_10260 IPR036249 Thioredoxin-like superfamily RAM_10260 IPR006660 Arsenate reductase-like RAM_10265 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_10265 IPR004450 Threonine synthase-like RAM_10265 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RAM_10265 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_10265 IPR026260 Threonine synthase, bacterial/archaeal RAM_10275 IPR036526 Carbon-nitrogen hydrolase superfamily RAM_10275 IPR000132 Nitrilase/cyanide hydratase, conserved site RAM_10275 IPR003010 Carbon-nitrogen hydrolase RAM_10280 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_10280 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_10280 IPR036291 NAD(P)-binding domain superfamily RAM_10290 IPR001128 Cytochrome P450 RAM_10290 IPR002397 Cytochrome P450, B-class RAM_10290 IPR036396 Cytochrome P450 superfamily RAM_10300 IPR002182 NB-ARC RAM_10300 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_10300 IPR019734 Tetratricopeptide repeat RAM_10300 IPR005158 Bacterial transcriptional activator domain RAM_10300 IPR016032 Signal transduction response regulator, C-terminal effector RAM_10300 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_10300 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_10300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_10310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_10310 IPR025714 Methyltransferase domain RAM_10315 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_10315 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_10315 IPR000524 Transcription regulator HTH, GntR RAM_10315 IPR004839 Aminotransferase, class I/classII RAM_10315 IPR036390 Winged helix DNA-binding domain superfamily RAM_10315 IPR015424 Pyridoxal phosphate-dependent transferase RAM_10315 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_10325 IPR029000 Cyclophilin-like domain superfamily RAM_10325 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RAM_10335 IPR036169 DXP reductoisomerase, C-terminal domain superfamily RAM_10335 IPR036291 NAD(P)-binding domain superfamily RAM_10335 IPR026877 DXP reductoisomerase C-terminal domain RAM_10335 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal RAM_10335 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase RAM_10335 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal RAM_10340 IPR008915 Peptidase M50 RAM_10340 IPR036034 PDZ superfamily RAM_10340 IPR041489 PDZ domain 6 RAM_10345 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type RAM_10345 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial RAM_10345 IPR011005 Dihydropteroate synthase-like RAM_10375 IPR016181 Acyl-CoA N-acyltransferase RAM_10375 IPR000182 GNAT domain RAM_10375 IPR017813 Mycothiol acetyltransferase RAM_10380 IPR012338 Beta-lactamase/transpeptidase-like RAM_10380 IPR001460 Penicillin-binding protein, transpeptidase RAM_10385 IPR036005 Creatinase/aminopeptidase-like RAM_10385 IPR001714 Peptidase M24, methionine aminopeptidase RAM_10385 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RAM_10385 IPR000994 Peptidase M24 RAM_10390 IPR000412 ABC-2 transporter RAM_10390 IPR013525 ABC-2 type transporter RAM_10395 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_10395 IPR003593 AAA+ ATPase domain RAM_10395 IPR003439 ABC transporter-like RAM_10395 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_10395 IPR017871 ABC transporter, conserved site RAM_10395 IPR025302 Domain of unknown function DUF4162 RAM_10410 IPR011711 GntR, C-terminal RAM_10410 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_10410 IPR000524 Transcription regulator HTH, GntR RAM_10410 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_10410 IPR036390 Winged helix DNA-binding domain superfamily RAM_10420 IPR023753 FAD/NAD(P)-binding domain RAM_10420 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_10420 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_10420 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RAM_10420 IPR017817 Mycothione reductase RAM_10420 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RAM_10420 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RAM_10435 IPR009003 Peptidase S1, PA clan RAM_10435 IPR033116 Serine proteases, trypsin family, serine active site RAM_10435 IPR018114 Serine proteases, trypsin family, histidine active site RAM_10435 IPR001254 Serine proteases, trypsin domain RAM_10435 IPR001314 Peptidase S1A, chymotrypsin family RAM_10440 IPR000182 GNAT domain RAM_10440 IPR016181 Acyl-CoA N-acyltransferase RAM_10445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_10445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_10445 IPR015424 Pyridoxal phosphate-dependent transferase RAM_10445 IPR004839 Aminotransferase, class I/classII RAM_10445 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RAM_10450 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_10450 IPR001650 Helicase, C-terminal RAM_10450 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_10450 IPR011545 DEAD/DEAH box helicase domain RAM_10450 IPR028622 ATP-dependent RNA helicase RhlE RAM_10450 IPR014014 RNA helicase, DEAD-box type, Q motif RAM_10450 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RAM_10460 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_10490 IPR036390 Winged helix DNA-binding domain superfamily RAM_10490 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_10490 IPR005119 LysR, substrate-binding RAM_10490 IPR000847 Transcription regulator HTH, LysR RAM_10500 IPR006076 FAD dependent oxidoreductase RAM_10500 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_10505 IPR005583 Peroxide stress protein YaaA RAM_10530 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RAM_10530 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RAM_10530 IPR023514 Glyoxylate/hydroxypyruvate reductase A RAM_10530 IPR036291 NAD(P)-binding domain superfamily RAM_10535 IPR018584 Glycosyltransferase family 87 RAM_10545 IPR036621 Anticodon-binding domain superfamily RAM_10545 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RAM_10545 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_10545 IPR004154 Anticodon-binding RAM_10545 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RAM_10545 IPR002316 Proline-tRNA ligase, class IIa RAM_10545 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type RAM_10545 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 RAM_10545 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily RAM_10545 IPR033730 Prokaryote proline-tRNA ligase core domain RAM_10560 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal RAM_10590 IPR035917 YjbQ-like superfamily RAM_10590 IPR001602 Uncharacterised protein family UPF0047 RAM_10595 IPR011006 CheY-like superfamily RAM_10595 IPR016032 Signal transduction response regulator, C-terminal effector RAM_10595 IPR001789 Signal transduction response regulator, receiver domain RAM_10595 IPR000792 Transcription regulator LuxR, C-terminal RAM_10610 IPR005804 Fatty acid desaturase domain RAM_10615 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RAM_10615 IPR017938 Riboflavin synthase-like beta-barrel RAM_10615 IPR001433 Oxidoreductase FAD/NAD(P)-binding RAM_10615 IPR012292 Globin/Protoglobin RAM_10615 IPR009050 Globin-like superfamily RAM_10615 IPR000971 Globin RAM_10615 IPR023950 Flavohemoprotein RAM_10615 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_10615 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_10620 IPR001647 DNA-binding HTH domain, TetR-type RAM_10620 IPR023764 Transcriptional repressor HTH, FabR RAM_10620 IPR009057 Homeobox-like domain superfamily RAM_10625 IPR036291 NAD(P)-binding domain superfamily RAM_10625 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RAM_10625 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RAM_10625 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 RAM_10625 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RAM_10630 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal RAM_10635 IPR034300 NADP transhydrogenase beta-like domain RAM_10635 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_10635 IPR012136 NADP transhydrogenase, beta subunit RAM_10650 IPR023753 FAD/NAD(P)-binding domain RAM_10650 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RAM_10650 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RAM_10650 IPR021179 Mercury(II) reductase RAM_10650 IPR036163 Heavy metal-associated domain superfamily RAM_10650 IPR006121 Heavy metal-associated domain, HMA RAM_10650 IPR017969 Heavy-metal-associated, conserved site RAM_10650 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_10650 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_10650 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RAM_10670 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_10670 IPR000794 Beta-ketoacyl synthase RAM_10670 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_10670 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_10670 IPR016039 Thiolase-like RAM_10675 IPR009081 Phosphopantetheine binding ACP domain RAM_10675 IPR036736 ACP-like superfamily RAM_10675 IPR003231 Acyl carrier protein (ACP) RAM_10680 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal RAM_10680 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RAM_10680 IPR016039 Thiolase-like RAM_10680 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RAM_10685 IPR014043 Acyl transferase RAM_10685 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_10685 IPR001227 Acyl transferase domain superfamily RAM_10685 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_10695 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_10695 IPR025736 PucR C-terminal helix-turn-helix domain RAM_10695 IPR041522 CdaR, GGDEF-like domain RAM_10700 IPR025302 Domain of unknown function DUF4162 RAM_10700 IPR017871 ABC transporter, conserved site RAM_10700 IPR003439 ABC transporter-like RAM_10700 IPR003593 AAA+ ATPase domain RAM_10700 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_10715 IPR006419 Nicotinamide mononucleotide transporter PnuC RAM_10720 IPR003804 L-lactate permease RAM_10730 IPR036291 NAD(P)-binding domain superfamily RAM_10730 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_10735 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RAM_10735 IPR013785 Aldolase-type TIM barrel RAM_10735 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RAM_10735 IPR037396 FMN hydroxy acid dehydrogenase domain RAM_10735 IPR000262 FMN-dependent dehydrogenase RAM_10740 IPR029061 Thiamin diphosphate-binding fold RAM_10740 IPR041621 Pyruvate dehydrogenase E1 component, middle domain RAM_10740 IPR004660 Pyruvate dehydrogenase E1 component RAM_10740 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_10740 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal RAM_10740 IPR005474 Transketolase, N-terminal RAM_10745 IPR021412 Protein of unknown function DUF3052 RAM_10750 IPR013766 Thioredoxin domain RAM_10750 IPR036249 Thioredoxin-like superfamily RAM_10750 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RAM_10750 IPR024706 Peroxiredoxin, AhpC-type RAM_10755 IPR009057 Homeobox-like domain superfamily RAM_10755 IPR006118 Recombinase, conserved site RAM_10755 IPR006120 Resolvase, HTH domain RAM_10755 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily RAM_10755 IPR006119 Resolvase, N-terminal catalytic domain RAM_10770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_10770 IPR001091 Restriction/modification DNA-methylase RAM_10770 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site RAM_10770 IPR002941 DNA methylase N-4/N-6 RAM_10860 IPR023791 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase RAM_10860 IPR000639 Epoxide hydrolase-like RAM_10860 IPR029058 Alpha/Beta hydrolase fold RAM_10860 IPR000073 Alpha/beta hydrolase fold-1 RAM_10870 IPR000594 THIF-type NAD/FAD binding fold RAM_10870 IPR035985 Ubiquitin-activating enzyme RAM_10900 IPR011701 Major facilitator superfamily RAM_10900 IPR020846 Major facilitator superfamily domain RAM_10900 IPR036259 MFS transporter superfamily RAM_10920 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_10920 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_10920 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_10920 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_10920 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_10920 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_10920 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_10925 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_10925 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_10925 IPR036291 NAD(P)-binding domain superfamily RAM_10930 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_10930 IPR000192 Aminotransferase class V domain RAM_10930 IPR010240 Cysteine desulfurase IscS RAM_10930 IPR016454 Cysteine desulfurase RAM_10930 IPR015424 Pyridoxal phosphate-dependent transferase RAM_10930 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_10930 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RAM_10935 IPR036390 Winged helix DNA-binding domain superfamily RAM_10935 IPR000524 Transcription regulator HTH, GntR RAM_10935 IPR011711 GntR, C-terminal RAM_10935 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_10935 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_10940 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RAM_10940 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA RAM_10940 IPR029052 Metallo-dependent phosphatase-like RAM_10950 IPR018951 Fumarase C, C-terminal RAM_10950 IPR004708 Aspartate ammonia-lyase RAM_10950 IPR024083 Fumarase/histidase, N-terminal RAM_10950 IPR022761 Fumarate lyase, N-terminal RAM_10950 IPR000362 Fumarate lyase family RAM_10950 IPR008948 L-Aspartase-like RAM_10950 IPR020557 Fumarate lyase, conserved site RAM_10960 IPR004840 Amino acid permease, conserved site RAM_10960 IPR004841 Amino acid permease/ SLC12A domain RAM_10965 IPR036390 Winged helix DNA-binding domain superfamily RAM_10965 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_10965 IPR000524 Transcription regulator HTH, GntR RAM_10965 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_10965 IPR011711 GntR, C-terminal RAM_10970 IPR016195 Polymerase/histidinol phosphatase-like RAM_10970 IPR004805 DNA polymerase III, alpha subunit RAM_10970 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain RAM_10970 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain RAM_10970 IPR040982 DNA polymerase III alpha subunit finger domain RAM_10970 IPR003141 Polymerase/histidinol phosphatase, N-terminal RAM_10970 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RAM_10970 IPR004013 PHP domain RAM_10970 IPR029460 DNA polymerase, helix-hairpin-helix motif RAM_10975 IPR020846 Major facilitator superfamily domain RAM_10975 IPR036259 MFS transporter superfamily RAM_10975 IPR011701 Major facilitator superfamily RAM_10985 IPR005490 L,D-transpeptidase catalytic domain RAM_10985 IPR041280 Bacterial Ig domain, transpeptidase-associated RAM_10985 IPR038063 L,D-transpeptidase catalytic domain-like RAM_10995 IPR032818 DedA family RAM_10995 IPR032816 SNARE associated Golgi protein RAM_11000 IPR007197 Radical SAM RAM_11000 IPR003698 Lipoyl synthase RAM_11000 IPR031691 Lipoyl synthase, N-terminal RAM_11000 IPR006638 Elp3/MiaB/NifB RAM_11000 IPR013785 Aldolase-type TIM barrel RAM_11005 IPR036291 NAD(P)-binding domain superfamily RAM_11005 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_11015 IPR009057 Homeobox-like domain superfamily RAM_11015 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_11015 IPR001647 DNA-binding HTH domain, TetR-type RAM_11025 IPR020605 Octanoyltransferase, conserved site RAM_11025 IPR000544 Octanoyltransferase RAM_11025 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RAM_11035 IPR010099 Epimerase family protein SDR39U1 RAM_11035 IPR036291 NAD(P)-binding domain superfamily RAM_11035 IPR013549 Domain of unknown function DUF1731 RAM_11035 IPR001509 NAD-dependent epimerase/dehydratase RAM_11045 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RAM_11045 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_11045 IPR036625 E3-binding domain superfamily RAM_11045 IPR004167 Peripheral subunit-binding domain RAM_11045 IPR000089 Biotin/lipoyl attachment RAM_11045 IPR011053 Single hybrid motif RAM_11045 IPR014276 2-oxoglutarate dehydrogenase, E2 component RAM_11045 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RAM_11050 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RAM_11050 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RAM_11050 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RAM_11050 IPR006258 Dihydrolipoamide dehydrogenase RAM_11050 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_11050 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_11050 IPR023753 FAD/NAD(P)-binding domain RAM_11080 IPR023042 Peptidase M17, leucine aminopeptidase RAM_11080 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RAM_11080 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B RAM_11080 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RAM_11100 IPR005786 Branched-chain amino acid aminotransferase II RAM_11100 IPR033939 Branched-chain aminotransferase RAM_11100 IPR018300 Aminotransferase, class IV, conserved site RAM_11100 IPR036038 Aminotransferase-like, PLP-dependent enzymes RAM_11100 IPR001544 Aminotransferase class IV RAM_11105 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily RAM_11105 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal RAM_11105 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like RAM_11105 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic RAM_11110 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RAM_11110 IPR029044 Nucleotide-diphospho-sugar transferases RAM_11110 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily RAM_11110 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site RAM_11110 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase RAM_11110 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site RAM_11110 IPR034683 Cytidylyltransferase IspD/TarI RAM_11110 IPR026596 Bifunctional enzyme IspD/IspF RAM_11125 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase RAM_11125 IPR028923 SAICAR synthetase/ADE2, N-terminal RAM_11130 IPR023210 NADP-dependent oxidoreductase domain RAM_11130 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_11140 IPR021403 Protein of unknown function DUF3043 RAM_11145 IPR035903 HesB-like domain superfamily RAM_11145 IPR017870 FeS cluster insertion, C-terminal, conserved site RAM_11145 IPR016092 FeS cluster insertion protein RAM_11145 IPR000361 FeS cluster biogenesis RAM_11155 IPR029056 Ribokinase-like RAM_11155 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_11155 IPR011611 Carbohydrate kinase PfkB RAM_11165 IPR006426 Asparagine synthase, glutamine-hydrolyzing RAM_11165 IPR017932 Glutamine amidotransferase type 2 domain RAM_11165 IPR033738 Asparagine synthase, N-terminal domain RAM_11165 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_11165 IPR001962 Asparagine synthase RAM_11170 IPR001505 Copper centre Cu(A) RAM_11170 IPR002429 Cytochrome c oxidase subunit II-like C-terminal RAM_11170 IPR008972 Cupredoxin RAM_11170 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily RAM_11175 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria RAM_11180 IPR029062 Class I glutamine amidotransferase-like RAM_11180 IPR018062 HTH domain AraC-type, conserved site RAM_11180 IPR009057 Homeobox-like domain superfamily RAM_11180 IPR018060 DNA binding HTH domain, AraC-type RAM_11180 IPR002818 DJ-1/PfpI RAM_11190 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily RAM_11190 IPR017459 Glycosyl transferase family 3, N-terminal domain RAM_11190 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily RAM_11190 IPR000312 Glycosyl transferase, family 3 RAM_11190 IPR005940 Anthranilate phosphoribosyl transferase RAM_11195 IPR001789 Signal transduction response regulator, receiver domain RAM_11195 IPR011006 CheY-like superfamily RAM_11205 IPR035973 Cytochrome c oxidase subunit III-like superfamily RAM_11205 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RAM_11205 IPR024791 Cytochrome c oxidase subunit III RAM_11205 IPR000298 Cytochrome c oxidase subunit III-like RAM_11210 IPR009152 Cytochrome bc1 complex, cytochrome c subunit RAM_11210 IPR036909 Cytochrome c-like domain superfamily RAM_11210 IPR009056 Cytochrome c-like domain RAM_11215 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RAM_11215 IPR014349 Rieske iron-sulphur protein RAM_11215 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RAM_11220 IPR016174 Di-haem cytochrome, transmembrane RAM_11220 IPR005797 Cytochrome b/b6, N-terminal RAM_11220 IPR027387 Cytochrome b/b6-like domain superfamily RAM_11235 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain RAM_11235 IPR000305 GIY-YIG endonuclease RAM_11235 IPR036397 Ribonuclease H superfamily RAM_11235 IPR012337 Ribonuclease H-like superfamily RAM_11235 IPR013520 Exonuclease, RNase T/DNA polymerase III RAM_11235 IPR035901 GIY-YIG endonuclease superfamily RAM_11250 IPR038765 Papain-like cysteine peptidase superfamily RAM_11250 IPR000064 Endopeptidase, NLPC/P60 domain RAM_11255 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_11255 IPR001296 Glycosyl transferase, family 1 RAM_11270 IPR036396 Cytochrome P450 superfamily RAM_11270 IPR017972 Cytochrome P450, conserved site RAM_11270 IPR002397 Cytochrome P450, B-class RAM_11270 IPR001128 Cytochrome P450 RAM_11275 IPR005814 Aminotransferase class-III RAM_11275 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA RAM_11275 IPR015424 Pyridoxal phosphate-dependent transferase RAM_11275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_11275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_11280 IPR002645 STAS domain RAM_11280 IPR011547 SLC26A/SulP transporter domain RAM_11280 IPR036513 STAS domain superfamily RAM_11280 IPR001902 SLC26A/SulP transporter RAM_11285 IPR002645 STAS domain RAM_11285 IPR036513 STAS domain superfamily RAM_11285 IPR001902 SLC26A/SulP transporter RAM_11285 IPR011547 SLC26A/SulP transporter domain RAM_11290 IPR004472 Dethiobiotin synthase BioD RAM_11290 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_11295 IPR006638 Elp3/MiaB/NifB RAM_11295 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB RAM_11295 IPR010722 Biotin and thiamin synthesis-associated domain RAM_11295 IPR013785 Aldolase-type TIM barrel RAM_11295 IPR024177 Biotin synthase RAM_11295 IPR007197 Radical SAM RAM_11310 IPR022919 Peptidase M48, protease HtpX, putative RAM_11310 IPR001915 Peptidase M48 RAM_11315 IPR004815 Lon protease, bacterial/eukaryotic-type RAM_11315 IPR008268 Peptidase S16, active site RAM_11315 IPR003593 AAA+ ATPase domain RAM_11315 IPR015947 PUA-like superfamily RAM_11315 IPR003959 ATPase, AAA-type, core RAM_11315 IPR027543 Lon protease, bacterial RAM_11315 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_11315 IPR003111 Lon, substrate-binding domain RAM_11315 IPR027065 Lon protease RAM_11315 IPR008269 Peptidase S16, Lon proteolytic domain RAM_11315 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_11315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_11325 IPR003473 Quinolinate synthetase A RAM_11325 IPR036094 Quinolinate synthetase A superfamily RAM_11325 IPR023066 Quinolinate synthase A, type 2 RAM_11330 IPR005288 L-aspartate oxidase RAM_11330 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RAM_11330 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily RAM_11330 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RAM_11330 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_11330 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RAM_11335 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal RAM_11335 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RAM_11335 IPR004393 Nicotinate-nucleotide pyrophosphorylase RAM_11335 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD RAM_11335 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal RAM_11335 IPR013785 Aldolase-type TIM barrel RAM_11335 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily RAM_11340 IPR023834 Type VII secretion system peptidase S8A, mycosin RAM_11340 IPR015500 Peptidase S8, subtilisin-related RAM_11340 IPR023828 Peptidase S8, subtilisin, Ser-active site RAM_11340 IPR022398 Peptidase S8, subtilisin, His-active site RAM_11340 IPR023827 Peptidase S8, subtilisin, Asp-active site RAM_11340 IPR036852 Peptidase S8/S53 domain superfamily RAM_11340 IPR000209 Peptidase S8/S53 domain RAM_11380 IPR000873 AMP-dependent synthetase/ligase RAM_11380 IPR020845 AMP-binding, conserved site RAM_11380 IPR025110 AMP-binding enzyme, C-terminal domain RAM_11380 IPR042099 AMP-dependent synthetase-like superfamily RAM_11400 IPR023836 EccCa-like, Actinobacteria RAM_11400 IPR023837 EccCb-like, Actinobacteria RAM_11400 IPR003593 AAA+ ATPase domain RAM_11400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_11400 IPR002543 FtsK domain RAM_11425 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily RAM_11425 IPR004401 Nucleoid-associated protein YbaB/EbfC family RAM_11435 IPR001139 Glycoside hydrolase family 30 RAM_11435 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain RAM_11435 IPR017853 Glycoside hydrolase superfamily RAM_11435 IPR013780 Glycosyl hydrolase, all-beta RAM_11445 IPR007795 Type VII secretion system EccB RAM_11450 IPR011006 CheY-like superfamily RAM_11450 IPR001789 Signal transduction response regulator, receiver domain RAM_11450 IPR000792 Transcription regulator LuxR, C-terminal RAM_11450 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_11455 IPR000792 Transcription regulator LuxR, C-terminal RAM_11455 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_11455 IPR001789 Signal transduction response regulator, receiver domain RAM_11455 IPR016032 Signal transduction response regulator, C-terminal effector RAM_11455 IPR011006 CheY-like superfamily RAM_11460 IPR003010 Carbon-nitrogen hydrolase RAM_11460 IPR036526 Carbon-nitrogen hydrolase superfamily RAM_11460 IPR001110 Uncharacterised protein family UPF0012, conserved site RAM_11465 IPR022695 Histidinol dehydrogenase, monofunctional RAM_11465 IPR012131 Histidinol dehydrogenase RAM_11465 IPR016161 Aldehyde/histidinol dehydrogenase RAM_11465 IPR001692 Histidinol dehydrogenase, conserved site RAM_11470 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RAM_11470 IPR004839 Aminotransferase, class I/classII RAM_11470 IPR005861 Histidinol-phosphate aminotransferase family RAM_11470 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_11470 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_11470 IPR015424 Pyridoxal phosphate-dependent transferase RAM_11475 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily RAM_11475 IPR000807 Imidazoleglycerol-phosphate dehydratase RAM_11475 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site RAM_11475 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_11480 IPR001279 Metallo-beta-lactamase RAM_11480 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_11495 IPR000639 Epoxide hydrolase-like RAM_11495 IPR000073 Alpha/beta hydrolase fold-1 RAM_11495 IPR029058 Alpha/Beta hydrolase fold RAM_11500 IPR004869 Membrane transport protein MMPL domain RAM_11500 IPR000731 Sterol-sensing domain RAM_11505 IPR013572 Transcription regulator MAATS, C-terminal RAM_11505 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_11505 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_11505 IPR009057 Homeobox-like domain superfamily RAM_11505 IPR001647 DNA-binding HTH domain, TetR-type RAM_11510 IPR002745 Phosphotransferase KptA/Tpt1 RAM_11510 IPR042080 RNA 2'-phosphotransferase, N-terminal domain RAM_11510 IPR022928 RNA 2'-phosphotransferase KptA, putative RAM_11510 IPR042081 RNA 2'-phosphotransferase, C-terminal domain RAM_11515 IPR000551 MerR-type HTH domain RAM_11515 IPR010211 Redox-sensitive transcriptional activator SoxR RAM_11515 IPR009061 Putative DNA-binding domain superfamily RAM_11515 IPR015358 Transcription regulator MerR, DNA binding RAM_11520 IPR029061 Thiamin diphosphate-binding fold RAM_11520 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_11520 IPR005474 Transketolase, N-terminal RAM_11525 IPR029061 Thiamin diphosphate-binding fold RAM_11525 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_11525 IPR005475 Transketolase-like, pyrimidine-binding domain RAM_11530 IPR020476 NUDIX hydrolase RAM_11530 IPR020084 NUDIX hydrolase, conserved site RAM_11530 IPR015797 NUDIX hydrolase-like domain superfamily RAM_11530 IPR023781 Nucleoside triphosphatase NudI RAM_11530 IPR000086 NUDIX hydrolase domain RAM_11540 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_11540 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_11540 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_11540 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_11540 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_11540 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_11540 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_11555 IPR010139 Imidazole glycerol phosphate synthase, subunit H RAM_11555 IPR017926 Glutamine amidotransferase RAM_11555 IPR029062 Class I glutamine amidotransferase-like RAM_11560 IPR013785 Aldolase-type TIM barrel RAM_11560 IPR010188 Bifunctional HisA/TrpF RAM_11560 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase RAM_11560 IPR011060 Ribulose-phosphate binding barrel RAM_11560 IPR006062 Histidine biosynthesis RAM_11565 IPR036291 NAD(P)-binding domain superfamily RAM_11565 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_11565 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_11565 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_11610 IPR000943 RNA polymerase sigma-70 RAM_11610 IPR014322 RNA polymerase sigma-B/F/G type RAM_11610 IPR007627 RNA polymerase sigma-70 region 2 RAM_11610 IPR007630 RNA polymerase sigma-70 region 4 RAM_11610 IPR013325 RNA polymerase sigma factor, region 2 RAM_11610 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_11610 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_11610 IPR014284 RNA polymerase sigma-70 like domain RAM_11610 IPR007624 RNA polymerase sigma-70 region 3 RAM_11615 IPR003431 Beta propeller phytase RAM_11615 IPR011042 Six-bladed beta-propeller, TolB-like RAM_11620 IPR006062 Histidine biosynthesis RAM_11620 IPR013785 Aldolase-type TIM barrel RAM_11620 IPR011060 Ribulose-phosphate binding barrel RAM_11620 IPR004651 Histidine biosynthesis, HisF RAM_11630 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily RAM_11630 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain RAM_11630 IPR026660 Phosphoribosyl-AMP cyclohydrolase RAM_11665 IPR005801 ADC synthase RAM_11665 IPR019999 Anthranilate synthase component I-like RAM_11665 IPR015890 Chorismate-utilising enzyme, C-terminal RAM_11665 IPR006805 Anthranilate synthase component I, N-terminal RAM_11665 IPR005256 Anthranilate synthase component I, PabB-like RAM_11675 IPR013785 Aldolase-type TIM barrel RAM_11675 IPR011060 Ribulose-phosphate binding barrel RAM_11675 IPR001468 Indole-3-glycerol phosphate synthase, conserved site RAM_11675 IPR013798 Indole-3-glycerol phosphate synthase RAM_11680 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_11680 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_11680 IPR023026 Tryptophan synthase beta chain/beta chain-like RAM_11680 IPR006654 Tryptophan synthase, beta chain RAM_11680 IPR006653 Tryptophan synthase, beta chain, conserved site RAM_11685 IPR002028 Tryptophan synthase, alpha chain RAM_11685 IPR018204 Tryptophan synthase, alpha chain, active site RAM_11685 IPR011060 Ribulose-phosphate binding barrel RAM_11685 IPR013785 Aldolase-type TIM barrel RAM_11690 IPR000551 MerR-type HTH domain RAM_11690 IPR009061 Putative DNA-binding domain superfamily RAM_11710 IPR008146 Glutamine synthetase, catalytic domain RAM_11710 IPR027303 Glutamine synthetase, glycine-rich site RAM_11710 IPR004809 Glutamine synthetase type I RAM_11710 IPR001637 Glutamine synthetase class-I, adenylation site RAM_11710 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_11710 IPR027302 Glutamine synthetase, N-terminal conserved site RAM_11710 IPR008147 Glutamine synthetase, beta-Grasp domain RAM_11710 IPR036651 Glutamine synthetase, N-terminal domain superfamily RAM_11725 IPR011650 Peptidase M20, dimerisation domain RAM_11725 IPR002933 Peptidase M20 RAM_11725 IPR036264 Bacterial exopeptidase dimerisation domain RAM_11725 IPR017439 Amidohydrolase RAM_11730 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt RAM_11735 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_11735 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_11735 IPR036291 NAD(P)-binding domain superfamily RAM_11740 IPR002489 Glutamate synthase, alpha subunit, C-terminal RAM_11740 IPR013785 Aldolase-type TIM barrel RAM_11740 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily RAM_11740 IPR017932 Glutamine amidotransferase type 2 domain RAM_11740 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_11740 IPR006982 Glutamate synthase, central-N RAM_11740 IPR002932 Glutamate synthase domain RAM_11745 IPR009051 Alpha-helical ferredoxin RAM_11745 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 RAM_11745 IPR028261 Dihydroprymidine dehydrogenase domain II RAM_11745 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_11745 IPR023753 FAD/NAD(P)-binding domain RAM_11760 IPR029058 Alpha/Beta hydrolase fold RAM_11760 IPR000073 Alpha/beta hydrolase fold-1 RAM_11765 IPR002480 DAHP synthetase, class II RAM_11765 IPR013785 Aldolase-type TIM barrel RAM_11770 IPR036291 NAD(P)-binding domain superfamily RAM_11770 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_11770 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_11780 IPR014292 Acyltransferase, WS/DGAT/MGAT RAM_11780 IPR009721 O-acyltransferase WSD1, C-terminal RAM_11780 IPR004255 O-acyltransferase, WSD1, N-terminal RAM_11790 IPR031905 Flotillin, C-terminal domain RAM_11790 IPR036013 Band 7/SPFH domain superfamily RAM_11790 IPR027705 Flotillin family RAM_11790 IPR001107 Band 7 domain RAM_11800 IPR011009 Protein kinase-like domain superfamily RAM_11800 IPR005543 PASTA domain RAM_11800 IPR000719 Protein kinase domain RAM_11800 IPR008271 Serine/threonine-protein kinase, active site RAM_11815 IPR036661 Luciferase-like domain superfamily RAM_11815 IPR011251 Luciferase-like domain RAM_11815 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted RAM_11820 IPR019845 Squalene/phytoene synthase, conserved site RAM_11820 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head RAM_11820 IPR002060 Squalene/phytoene synthase RAM_11820 IPR008949 Isoprenoid synthase domain superfamily RAM_11825 IPR002937 Amine oxidase RAM_11825 IPR014105 Carotenoid/retinoid oxidoreductase RAM_11825 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_11825 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site RAM_11840 IPR004620 5,10-methylenetetrahydrofolate reductase RAM_11840 IPR003171 Methylenetetrahydrofolate reductase RAM_11840 IPR029041 FAD-linked oxidoreductase-like RAM_11885 IPR023635 Peptide deformylase RAM_11885 IPR036821 Peptide deformylase superfamily RAM_11890 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_11890 IPR001650 Helicase, C-terminal RAM_11890 IPR003593 AAA+ ATPase domain RAM_11890 IPR013701 DEAD/H associated RAM_11890 IPR011545 DEAD/DEAH box helicase domain RAM_11890 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_11895 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RAM_11895 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_11895 IPR036390 Winged helix DNA-binding domain superfamily RAM_11895 IPR001034 DeoR-type HTH domain RAM_11895 IPR037171 NagB/RpiA transferase-like RAM_11895 IPR014036 DeoR C-terminal sensor domain RAM_11900 IPR036259 MFS transporter superfamily RAM_11900 IPR020846 Major facilitator superfamily domain RAM_11900 IPR011701 Major facilitator superfamily RAM_11905 IPR005255 PdxA family RAM_11920 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_11920 IPR003593 AAA+ ATPase domain RAM_11920 IPR020584 DNA recombination/repair protein RecA, conserved site RAM_11920 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface RAM_11920 IPR023400 DNA recombination and repair protein RecA, C-terminal RAM_11920 IPR013765 DNA recombination and repair protein RecA RAM_11920 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain RAM_11925 IPR003783 Regulatory protein RecX RAM_11925 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_11945 IPR031337 KDPG/KHG aldolase, active site 1 RAM_11945 IPR031338 KDPG/KHG aldolase, active site 2 RAM_11945 IPR013785 Aldolase-type TIM barrel RAM_11945 IPR000887 KDPG/KHG aldolase RAM_11950 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RAM_11950 IPR037237 IlvD/EDD, N-terminal domain RAM_11950 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RAM_11950 IPR004786 6-phosphogluconate dehydratase RAM_11950 IPR042096 Dihydroxy-acid dehydratase, C-terminal RAM_11965 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RAM_11965 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_11965 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit RAM_11965 IPR011281 Succinate dehydrogenase, flavoprotein subunit RAM_11965 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RAM_11965 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RAM_11965 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily RAM_11965 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RAM_11970 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_11970 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_11970 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RAM_11970 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RAM_11970 IPR009051 Alpha-helical ferredoxin RAM_11970 IPR012675 Beta-grasp domain superfamily RAM_11970 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_12000 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_12000 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_12000 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_12000 IPR036291 NAD(P)-binding domain superfamily RAM_12005 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_12005 IPR035906 MetI-like superfamily RAM_12005 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RAM_12010 IPR035906 MetI-like superfamily RAM_12010 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_12010 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RAM_12015 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RAM_12015 IPR018313 Solute-binding protein family 3, conserved site RAM_12020 IPR017871 ABC transporter, conserved site RAM_12020 IPR003439 ABC transporter-like RAM_12020 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RAM_12020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_12020 IPR003593 AAA+ ATPase domain RAM_12025 IPR039420 Transcriptional regulatory protein WalR-like RAM_12025 IPR001789 Signal transduction response regulator, receiver domain RAM_12025 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_12025 IPR011006 CheY-like superfamily RAM_12025 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_12030 IPR005467 Histidine kinase domain RAM_12030 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_12030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_12030 IPR003594 Histidine kinase/HSP90-like ATPase RAM_12030 IPR003660 HAMP domain RAM_12030 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_12030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_12040 IPR036390 Winged helix DNA-binding domain superfamily RAM_12040 IPR002577 Helix-turn-helix, HxlR type RAM_12040 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_12060 IPR036691 Endonuclease/exonuclease/phosphatase superfamily RAM_12060 IPR005135 Endonuclease/exonuclease/phosphatase RAM_12090 IPR002938 FAD-binding domain RAM_12090 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_12095 IPR009057 Homeobox-like domain superfamily RAM_12095 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_12095 IPR003012 Tetracycline transcriptional regulator, TetR RAM_12095 IPR001647 DNA-binding HTH domain, TetR-type RAM_12095 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_12095 IPR004111 Tetracycline repressor TetR, C-terminal RAM_12100 IPR002938 FAD-binding domain RAM_12100 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_12105 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB RAM_12105 IPR023404 Radical SAM, alpha/beta horseshoe RAM_12105 IPR002792 TRAM domain RAM_12105 IPR006638 Elp3/MiaB/NifB RAM_12105 IPR005839 Methylthiotransferase RAM_12105 IPR007197 Radical SAM RAM_12105 IPR038135 Methylthiotransferase, N-terminal domain superfamily RAM_12105 IPR013848 Methylthiotransferase, N-terminal RAM_12105 IPR020612 Methylthiotransferase, conserved site RAM_12110 IPR006638 Elp3/MiaB/NifB RAM_12110 IPR005839 Methylthiotransferase RAM_12110 IPR020612 Methylthiotransferase, conserved site RAM_12110 IPR023404 Radical SAM, alpha/beta horseshoe RAM_12110 IPR002792 TRAM domain RAM_12110 IPR038135 Methylthiotransferase, N-terminal domain superfamily RAM_12110 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB RAM_12110 IPR013848 Methylthiotransferase, N-terminal RAM_12110 IPR007197 Radical SAM RAM_12125 IPR007139 Protein of unknown function DUF349 RAM_12130 IPR018022 IPP transferase RAM_12130 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_12130 IPR039657 Dimethylallyltransferase RAM_12135 IPR001653 Diaminopimelate epimerase, DapF RAM_12135 IPR018510 Diaminopimelate epimerase, active site RAM_12140 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RAM_12140 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RAM_12140 IPR022874 Valine-tRNA ligase, type 2 RAM_12140 IPR033705 Valyl tRNA synthetase, anticodon-binding domain RAM_12140 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RAM_12140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_12140 IPR002300 Aminoacyl-tRNA synthetase, class Ia RAM_12140 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RAM_12140 IPR002303 Valine-tRNA ligase RAM_12155 IPR030394 HflX-type guanine nucleotide-binding (G) domain RAM_12155 IPR006073 GTP binding domain RAM_12155 IPR016496 GTPase HflX RAM_12155 IPR042108 GTPase HflX, N-terminal domain superfamily RAM_12155 IPR025121 GTPase HflX, N-terminal RAM_12155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_12155 IPR032305 GTP-binding protein, middle domain RAM_12165 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_12165 IPR036390 Winged helix DNA-binding domain superfamily RAM_12165 IPR039418 LexA-like RAM_12165 IPR006200 Transcription regulator LexA RAM_12165 IPR036286 LexA/Signal peptidase-like superfamily RAM_12165 IPR006199 LexA repressor, DNA-binding domain RAM_12165 IPR006197 Peptidase S24, LexA-like RAM_12165 IPR015927 Peptidase S24/S26A/S26B/S26C RAM_12175 IPR005144 ATP-cone domain RAM_12175 IPR003796 Ribonucleotide reductase regulator NrdR-like RAM_12180 IPR000788 Ribonucleotide reductase large subunit, C-terminal RAM_12180 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent RAM_12180 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain RAM_12200 IPR023048 NADH-azoreductase, FMN-dependent RAM_12200 IPR029039 Flavoprotein-like superfamily RAM_12200 IPR003680 Flavodoxin-like fold RAM_12210 IPR002470 Peptidase S9A, prolyl oligopeptidase RAM_12210 IPR023302 Peptidase S9A, N-terminal domain RAM_12210 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RAM_12210 IPR029058 Alpha/Beta hydrolase fold RAM_12225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_12225 IPR004839 Aminotransferase, class I/classII RAM_12225 IPR015424 Pyridoxal phosphate-dependent transferase RAM_12225 IPR000524 Transcription regulator HTH, GntR RAM_12225 IPR036390 Winged helix DNA-binding domain superfamily RAM_12225 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_12245 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain RAM_12245 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal RAM_12245 IPR005674 CocE/Serine esterase RAM_12245 IPR008979 Galactose-binding-like domain superfamily RAM_12245 IPR029058 Alpha/Beta hydrolase fold RAM_12245 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase RAM_12250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_12250 IPR003848 Domain of unknown function DUF218 RAM_12255 IPR006093 Oxygen oxidoreductase covalent FAD-binding site RAM_12255 IPR016167 FAD-binding, type PCMH, subdomain 1 RAM_12255 IPR036318 FAD-binding, type PCMH-like superfamily RAM_12255 IPR006094 FAD linked oxidase, N-terminal RAM_12255 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_12255 IPR016164 FAD-linked oxidase-like, C-terminal RAM_12255 IPR012951 Berberine/berberine-like RAM_12255 IPR016166 FAD-binding domain, PCMH-type RAM_12260 IPR000792 Transcription regulator LuxR, C-terminal RAM_12260 IPR001789 Signal transduction response regulator, receiver domain RAM_12260 IPR016032 Signal transduction response regulator, C-terminal effector RAM_12260 IPR011006 CheY-like superfamily RAM_12265 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_12265 IPR003594 Histidine kinase/HSP90-like ATPase RAM_12265 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_12280 IPR001509 NAD-dependent epimerase/dehydratase RAM_12280 IPR005886 UDP-glucose 4-epimerase RAM_12280 IPR036291 NAD(P)-binding domain superfamily RAM_12285 IPR022963 Galactokinase, bacterial RAM_12285 IPR036554 GHMP kinase, C-terminal domain superfamily RAM_12285 IPR006203 GHMP kinase, ATP-binding, conserved site RAM_12285 IPR006204 GHMP kinase N-terminal domain RAM_12285 IPR013750 GHMP kinase, C-terminal domain RAM_12285 IPR006206 Mevalonate/galactokinase RAM_12285 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_12285 IPR019741 Galactokinase, conserved site RAM_12285 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_12285 IPR019539 Galactokinase galactose-binding domain RAM_12285 IPR000705 Galactokinase RAM_12290 IPR038157 Ferrous iron transporter, core domain RAM_12290 IPR036390 Winged helix DNA-binding domain superfamily RAM_12290 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_12290 IPR008988 Transcriptional repressor, C-terminal RAM_12290 IPR001367 Iron dependent repressor, metal binding and dimerisation domain RAM_12290 IPR022687 DTXR-type HTH domain RAM_12290 IPR007167 Ferrous iron transporter FeoA domain RAM_12290 IPR022689 Iron dependent repressor RAM_12290 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily RAM_12290 IPR040767 Diphteria toxin repressor, SH3 domain RAM_12295 IPR036873 Rhodanese-like domain superfamily RAM_12295 IPR001763 Rhodanese-like domain RAM_12300 IPR037138 Histone deacetylase domain superfamily RAM_12300 IPR003085 Acetoin utilization protein AcuC RAM_12300 IPR023696 Ureohydrolase domain superfamily RAM_12300 IPR000286 Histone deacetylase family RAM_12300 IPR023801 Histone deacetylase domain RAM_12310 IPR012338 Beta-lactamase/transpeptidase-like RAM_12310 IPR001466 Beta-lactamase-related RAM_12315 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_12315 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_12315 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_12315 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_12315 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_12320 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_12320 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_12320 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_12320 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_12320 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_12320 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_12330 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_12330 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_12330 IPR036291 NAD(P)-binding domain superfamily RAM_12335 IPR036291 NAD(P)-binding domain superfamily RAM_12335 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_12335 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_12340 IPR030802 ABC transporter permease MalE RAM_12340 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RAM_12345 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RAM_12345 IPR030802 ABC transporter permease MalE RAM_12395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_12395 IPR015424 Pyridoxal phosphate-dependent transferase RAM_12395 IPR024551 Aminotransferase, putative RAM_12395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_12405 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_12405 IPR002938 FAD-binding domain RAM_12410 IPR000843 LacI-type HTH domain RAM_12410 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_12410 IPR028082 Periplasmic binding protein-like I RAM_12420 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_12420 IPR035906 MetI-like superfamily RAM_12425 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE RAM_12425 IPR035906 MetI-like superfamily RAM_12425 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_12430 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RAM_12430 IPR001360 Glycoside hydrolase family 1 RAM_12430 IPR017853 Glycoside hydrolase superfamily RAM_12430 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase RAM_12430 IPR018120 Glycoside hydrolase family 1, active site RAM_12435 IPR020845 AMP-binding, conserved site RAM_12435 IPR000873 AMP-dependent synthetase/ligase RAM_12435 IPR042099 AMP-dependent synthetase-like superfamily RAM_12455 IPR016300 Arsenical pump ATPase, ArsA/GET3 RAM_12455 IPR040612 ArsA, HSP20-like domain RAM_12455 IPR025723 Anion-transporting ATPase-like domain RAM_12455 IPR008978 HSP20-like chaperone RAM_12455 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_12465 IPR004654 Glucokinase ROK RAM_12465 IPR000600 ROK family RAM_12480 IPR011793 Putative glutamate--cysteine ligase YbdK RAM_12480 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_12480 IPR006336 Glutamate--cysteine ligase, GCS2 RAM_12490 IPR022742 Serine aminopeptidase, S33 RAM_12490 IPR012354 Esterase/lipase RAM_12490 IPR029058 Alpha/Beta hydrolase fold RAM_12495 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase RAM_12495 IPR002123 Phospholipid/glycerol acyltransferase RAM_12500 IPR030853 3-5 exoribonuclease, actinobacteria RAM_12500 IPR012337 Ribonuclease H-like superfamily RAM_12500 IPR036397 Ribonuclease H superfamily RAM_12500 IPR033390 3'-5' exoribonuclease Rv2179c-like domain RAM_12505 IPR006219 DHAP synthase, class 1 RAM_12505 IPR013785 Aldolase-type TIM barrel RAM_12505 IPR006218 DAHP synthetase I/KDSA RAM_12510 IPR015912 Phosphofructokinase, conserved site RAM_12510 IPR022953 ATP-dependent 6-phosphofructokinase RAM_12510 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type RAM_12510 IPR000023 Phosphofructokinase domain RAM_12510 IPR035966 Phosphofructokinase superfamily RAM_12510 IPR012829 Phosphofructokinase, mixed-substrate PFK group III RAM_12520 IPR013325 RNA polymerase sigma factor, region 2 RAM_12520 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_12520 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_12520 IPR007627 RNA polymerase sigma-70 region 2 RAM_12520 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_12520 IPR039425 RNA polymerase sigma-70 like RAM_12520 IPR014284 RNA polymerase sigma-70 like domain RAM_12520 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_12525 IPR022313 Phenylalanine/histidine ammonia-lyases, active site RAM_12525 IPR008948 L-Aspartase-like RAM_12525 IPR005921 Histidine ammonia-lyase RAM_12525 IPR024083 Fumarase/histidase, N-terminal RAM_12525 IPR001106 Aromatic amino acid lyase RAM_12535 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_12535 IPR036390 Winged helix DNA-binding domain superfamily RAM_12535 IPR002577 Helix-turn-helix, HxlR type RAM_12540 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_12540 IPR036390 Winged helix DNA-binding domain superfamily RAM_12540 IPR001845 HTH ArsR-type DNA-binding domain RAM_12540 IPR011991 ArsR-like helix-turn-helix domain RAM_12545 IPR013783 Immunoglobulin-like fold RAM_12545 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_12545 IPR001579 Glycoside hydrolase, chitinase active site RAM_12545 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_12545 IPR036116 Fibronectin type III superfamily RAM_12545 IPR017853 Glycoside hydrolase superfamily RAM_12545 IPR029070 Chitinase insertion domain superfamily RAM_12545 IPR018366 Carbohydrate-binding type-2, conserved site RAM_12545 IPR011583 Chitinase II RAM_12545 IPR001919 Carbohydrate-binding type-2 domain RAM_12545 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_12545 IPR003961 Fibronectin type III RAM_12555 IPR015793 Pyruvate kinase, barrel RAM_12555 IPR040442 Pyruvate kinase-like domain superfamily RAM_12555 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RAM_12555 IPR015806 Pyruvate kinase, insert domain superfamily RAM_12555 IPR001697 Pyruvate kinase RAM_12555 IPR011037 Pyruvate kinase-like, insert domain superfamily RAM_12555 IPR018209 Pyruvate kinase, active site RAM_12555 IPR036918 Pyruvate kinase, C-terminal domain superfamily RAM_12555 IPR015795 Pyruvate kinase, C-terminal RAM_12560 IPR003703 Acyl-CoA thioesterase RAM_12560 IPR029069 HotDog domain superfamily RAM_12580 IPR011006 CheY-like superfamily RAM_12580 IPR016032 Signal transduction response regulator, C-terminal effector RAM_12580 IPR000792 Transcription regulator LuxR, C-terminal RAM_12580 IPR001789 Signal transduction response regulator, receiver domain RAM_12585 IPR015590 Aldehyde dehydrogenase domain RAM_12585 IPR016161 Aldehyde/histidinol dehydrogenase RAM_12585 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_12585 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_12585 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_12595 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_12595 IPR009057 Homeobox-like domain superfamily RAM_12595 IPR001647 DNA-binding HTH domain, TetR-type RAM_12600 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_12600 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_12600 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_12600 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_12600 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_12600 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_12600 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_12605 IPR003673 CoA-transferase family III RAM_12605 IPR023606 CoA-transferase family III domain superfamily RAM_12615 IPR029045 ClpP/crotonase-like domain superfamily RAM_12615 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_12615 IPR001753 Enoyl-CoA hydratase/isomerase RAM_12615 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_12645 IPR005829 Sugar transporter, conserved site RAM_12645 IPR036259 MFS transporter superfamily RAM_12645 IPR011701 Major facilitator superfamily RAM_12645 IPR020846 Major facilitator superfamily domain RAM_12650 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_12650 IPR001647 DNA-binding HTH domain, TetR-type RAM_12650 IPR023769 Nucleoid occlusion factor SlmA RAM_12650 IPR009057 Homeobox-like domain superfamily RAM_12655 IPR001734 Sodium/solute symporter RAM_12655 IPR038377 Sodium/glucose symporter superfamily RAM_12670 IPR004942 Roadblock/LAMTOR2 domain RAM_12700 IPR036724 Cobalamin-binding domain superfamily RAM_12700 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic RAM_12700 IPR006158 Cobalamin (vitamin B12)-binding domain RAM_12700 IPR033669 Fused isobutyryl-CoA mutase RAM_12700 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic RAM_12700 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_12700 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic RAM_12705 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_12705 IPR025714 Methyltransferase domain RAM_12710 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent RAM_12710 IPR036661 Luciferase-like domain superfamily RAM_12710 IPR011251 Luciferase-like domain RAM_12715 IPR009057 Homeobox-like domain superfamily RAM_12715 IPR041642 HTH-type transcriptional repressor KstR, C-terminal RAM_12715 IPR001647 DNA-binding HTH domain, TetR-type RAM_12720 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_12720 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_12720 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_12720 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_12720 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_12720 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_12725 IPR038718 SNF2-like, N-terminal domain superfamily RAM_12725 IPR001650 Helicase, C-terminal RAM_12725 IPR022138 Helicase SWF/SNF-related RAM_12725 IPR000330 SNF2-related, N-terminal domain RAM_12725 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_12725 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_12740 IPR004255 O-acyltransferase, WSD1, N-terminal RAM_12740 IPR009721 O-acyltransferase WSD1, C-terminal RAM_12740 IPR014292 Acyltransferase, WS/DGAT/MGAT RAM_12745 IPR004378 F420H(2)-dependent quinone reductase RAM_12745 IPR012349 FMN-binding split barrel RAM_12750 IPR029058 Alpha/Beta hydrolase fold RAM_12750 IPR000073 Alpha/beta hydrolase fold-1 RAM_12755 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_12755 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_12755 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_12755 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_12755 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_12760 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_12760 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_12760 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_12760 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_12760 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_12760 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_12765 IPR016709 Uncharacterised protein family UPF0336 RAM_12765 IPR039569 N-terminal of MaoC-like dehydratase RAM_12765 IPR029069 HotDog domain superfamily RAM_12785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_12785 IPR023465 Riboflavin kinase domain superfamily RAM_12785 IPR023468 Riboflavin kinase RAM_12785 IPR002606 Riboflavin kinase, bacterial RAM_12785 IPR015864 FAD synthetase RAM_12785 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic RAM_12795 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RAM_12795 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_12795 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_12795 IPR017938 Riboflavin synthase-like beta-barrel RAM_12795 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_12795 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RAM_12795 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_12795 IPR012675 Beta-grasp domain superfamily RAM_12795 IPR001433 Oxidoreductase FAD/NAD(P)-binding RAM_12795 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_12805 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RAM_12805 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RAM_12815 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_12815 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RAM_12815 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RAM_12820 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_12820 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_12820 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_12820 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_12820 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RAM_12825 IPR000639 Epoxide hydrolase-like RAM_12825 IPR029058 Alpha/Beta hydrolase fold RAM_12825 IPR000073 Alpha/beta hydrolase fold-1 RAM_12830 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II RAM_12830 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RAM_12830 IPR037523 Vicinal oxygen chelate (VOC) domain RAM_12830 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RAM_12835 IPR002563 Flavin reductase like domain RAM_12835 IPR012349 FMN-binding split barrel RAM_12850 IPR001279 Metallo-beta-lactamase RAM_12850 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_12850 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D RAM_12855 IPR005804 Fatty acid desaturase domain RAM_12860 IPR003439 ABC transporter-like RAM_12860 IPR017871 ABC transporter, conserved site RAM_12860 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_12860 IPR004602 UvrABC system subunit A RAM_12860 IPR041552 UvrA DNA-binding domain RAM_12860 IPR041102 UvrA, interaction domain RAM_12860 IPR003593 AAA+ ATPase domain RAM_12880 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_12880 IPR005119 LysR, substrate-binding RAM_12880 IPR000847 Transcription regulator HTH, LysR RAM_12880 IPR036390 Winged helix DNA-binding domain superfamily RAM_12885 IPR036259 MFS transporter superfamily RAM_12885 IPR020846 Major facilitator superfamily domain RAM_12885 IPR011701 Major facilitator superfamily RAM_12890 IPR028202 Reductase, C-terminal RAM_12890 IPR023744 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin--NAD(+) reductase subunit RAM_12890 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_12890 IPR023753 FAD/NAD(P)-binding domain RAM_12890 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_12915 IPR007627 RNA polymerase sigma-70 region 2 RAM_12915 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_12915 IPR014284 RNA polymerase sigma-70 like domain RAM_12915 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_12915 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_12915 IPR007630 RNA polymerase sigma-70 region 4 RAM_12915 IPR013325 RNA polymerase sigma factor, region 2 RAM_12915 IPR039425 RNA polymerase sigma-70 like RAM_12950 IPR032466 Metal-dependent hydrolase RAM_12950 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_12950 IPR005920 Imidazolonepropionase RAM_12950 IPR006680 Amidohydrolase-related RAM_12955 IPR029058 Alpha/Beta hydrolase fold RAM_12955 IPR000073 Alpha/beta hydrolase fold-1 RAM_12960 IPR020617 Thiolase, C-terminal RAM_12960 IPR002155 Thiolase RAM_12960 IPR020613 Thiolase, conserved site RAM_12960 IPR020616 Thiolase, N-terminal RAM_12960 IPR016039 Thiolase-like RAM_12965 IPR036396 Cytochrome P450 superfamily RAM_12965 IPR002397 Cytochrome P450, B-class RAM_12965 IPR001128 Cytochrome P450 RAM_12980 IPR005274 Inner membrane protein YhjD RAM_12980 IPR017039 Virulence factor BrkB RAM_13000 IPR022852 Carnitinyl-CoA dehydratase RAM_13000 IPR029045 ClpP/crotonase-like domain superfamily RAM_13000 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_13000 IPR001753 Enoyl-CoA hydratase/isomerase RAM_13000 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_13005 IPR000873 AMP-dependent synthetase/ligase RAM_13005 IPR025110 AMP-binding enzyme, C-terminal domain RAM_13005 IPR020845 AMP-binding, conserved site RAM_13005 IPR042099 AMP-dependent synthetase-like superfamily RAM_13010 IPR004136 Nitronate monooxygenase RAM_13010 IPR013785 Aldolase-type TIM barrel RAM_13015 IPR009003 Peptidase S1, PA clan RAM_13015 IPR001254 Serine proteases, trypsin domain RAM_13015 IPR018114 Serine proteases, trypsin family, histidine active site RAM_13015 IPR033116 Serine proteases, trypsin family, serine active site RAM_13015 IPR001314 Peptidase S1A, chymotrypsin family RAM_13020 IPR002293 Amino acid/polyamine transporter I RAM_13025 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RAM_13025 IPR011663 UbiC transcription regulator-associated RAM_13025 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_13025 IPR036390 Winged helix DNA-binding domain superfamily RAM_13025 IPR000524 Transcription regulator HTH, GntR RAM_13040 IPR036908 RlpA-like domain superfamily RAM_13045 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain RAM_13045 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain RAM_13045 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily RAM_13045 IPR011167 Iron-dependent fumarate hydratase RAM_13045 IPR020557 Fumarate lyase, conserved site RAM_13050 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_13050 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_13050 IPR013325 RNA polymerase sigma factor, region 2 RAM_13050 IPR009042 RNA polymerase sigma-70 region 1.2 RAM_13050 IPR007627 RNA polymerase sigma-70 region 2 RAM_13050 IPR007624 RNA polymerase sigma-70 region 3 RAM_13050 IPR007630 RNA polymerase sigma-70 region 4 RAM_13050 IPR000943 RNA polymerase sigma-70 RAM_13050 IPR014284 RNA polymerase sigma-70 like domain RAM_13055 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily RAM_13055 IPR003732 D-aminoacyl-tRNA deacylase DTD RAM_13060 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RAM_13060 IPR040758 Release factor glutamine methyltransferase, N-terminal domain RAM_13060 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RAM_13060 IPR004556 Methyltransferase HemK-like RAM_13060 IPR007848 Methyltransferase small domain RAM_13060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_13065 IPR036264 Bacterial exopeptidase dimerisation domain RAM_13065 IPR017439 Amidohydrolase RAM_13065 IPR011650 Peptidase M20, dimerisation domain RAM_13065 IPR023905 Acetyldiaminopimelate deacetylase RAM_13065 IPR002933 Peptidase M20 RAM_13075 IPR029056 Ribokinase-like RAM_13075 IPR002139 Ribokinase/fructokinase RAM_13075 IPR011611 Carbohydrate kinase PfkB RAM_13075 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_13080 IPR022830 Indigoidine synthase A-like RAM_13080 IPR007342 Pseudouridine-5'-phosphate glycosidase RAM_13105 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RAM_13105 IPR001036 Acriflavin resistance protein RAM_13115 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_13115 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_13115 IPR006935 Helicase/UvrB, N-terminal RAM_13120 IPR028082 Periplasmic binding protein-like I RAM_13120 IPR013456 D-xylose ABC transporter, substrate-binding protein RAM_13120 IPR025997 Periplasmic binding protein RAM_13125 IPR003439 ABC transporter-like RAM_13125 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_13125 IPR003593 AAA+ ATPase domain RAM_13130 IPR001851 ABC transporter, permease RAM_13150 IPR004809 Glutamine synthetase type I RAM_13150 IPR036651 Glutamine synthetase, N-terminal domain superfamily RAM_13150 IPR008146 Glutamine synthetase, catalytic domain RAM_13150 IPR027303 Glutamine synthetase, glycine-rich site RAM_13150 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_13150 IPR027302 Glutamine synthetase, N-terminal conserved site RAM_13150 IPR008147 Glutamine synthetase, beta-Grasp domain RAM_13160 IPR004758 Amino acid transporter RAM_13160 IPR002293 Amino acid/polyamine transporter I RAM_13165 IPR017853 Glycoside hydrolase superfamily RAM_13165 IPR003385 Glycoside hydrolase, family 77 RAM_13170 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RAM_13170 IPR004193 Glycoside hydrolase, family 13, N-terminal RAM_13170 IPR013780 Glycosyl hydrolase, all-beta RAM_13170 IPR017853 Glycoside hydrolase superfamily RAM_13170 IPR013783 Immunoglobulin-like fold RAM_13170 IPR014756 Immunoglobulin E-set RAM_13170 IPR011837 Glycogen debranching enzyme, GlgX type RAM_13175 IPR012767 Maltooligosyl trehalose synthase RAM_13175 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RAM_13175 IPR017853 Glycoside hydrolase superfamily RAM_13180 IPR014756 Immunoglobulin E-set RAM_13180 IPR017853 Glycoside hydrolase superfamily RAM_13180 IPR012768 Malto-oligosyltrehalose trehalohydrolase RAM_13180 IPR004193 Glycoside hydrolase, family 13, N-terminal RAM_13180 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RAM_13180 IPR013783 Immunoglobulin-like fold RAM_13185 IPR013783 Immunoglobulin-like fold RAM_13185 IPR004193 Glycoside hydrolase, family 13, N-terminal RAM_13185 IPR014756 Immunoglobulin E-set RAM_13185 IPR017853 Glycoside hydrolase superfamily RAM_13185 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RAM_13185 IPR013780 Glycosyl hydrolase, all-beta RAM_13185 IPR011837 Glycogen debranching enzyme, GlgX type RAM_13190 IPR013780 Glycosyl hydrolase, all-beta RAM_13190 IPR013783 Immunoglobulin-like fold RAM_13190 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase RAM_13190 IPR017853 Glycoside hydrolase superfamily RAM_13190 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RAM_13190 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S RAM_13195 IPR012810 Trehalose synthase/alpha-amylase, N-terminal RAM_13195 IPR032091 Maltogenic Amylase, C-terminal RAM_13195 IPR017853 Glycoside hydrolase superfamily RAM_13195 IPR013780 Glycosyl hydrolase, all-beta RAM_13195 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RAM_13200 IPR011009 Protein kinase-like domain superfamily RAM_13200 IPR040999 Maltokinase N-terminal cap domain RAM_13205 IPR013780 Glycosyl hydrolase, all-beta RAM_13205 IPR017853 Glycoside hydrolase superfamily RAM_13205 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB RAM_13205 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta RAM_13205 IPR037439 1,4-alpha-glucan-branching enzyme RAM_13205 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RAM_13205 IPR004193 Glycoside hydrolase, family 13, N-terminal RAM_13205 IPR014756 Immunoglobulin E-set RAM_13205 IPR013783 Immunoglobulin-like fold RAM_13215 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_13215 IPR012760 RNA polymerase sigma factor RpoD, C-terminal RAM_13215 IPR014284 RNA polymerase sigma-70 like domain RAM_13215 IPR028630 RNA polymerase sigma factor RpoD RAM_13215 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_13215 IPR007624 RNA polymerase sigma-70 region 3 RAM_13215 IPR007630 RNA polymerase sigma-70 region 4 RAM_13215 IPR013325 RNA polymerase sigma factor, region 2 RAM_13215 IPR007627 RNA polymerase sigma-70 region 2 RAM_13215 IPR000943 RNA polymerase sigma-70 RAM_13215 IPR009042 RNA polymerase sigma-70 region 1.2 RAM_13220 IPR000600 ROK family RAM_13225 IPR000760 Inositol monophosphatase-like RAM_13225 IPR020583 Inositol monophosphatase, metal-binding site RAM_13225 IPR020550 Inositol monophosphatase, conserved site RAM_13245 IPR036157 dUTPase-like superfamily RAM_13245 IPR029054 dUTPase-like RAM_13245 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase RAM_13245 IPR033704 dUTPase, trimeric RAM_13270 IPR036291 NAD(P)-binding domain superfamily RAM_13270 IPR006036 Potassium uptake protein TrkA RAM_13270 IPR003148 Regulator of K+ conductance, N-terminal RAM_13270 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily RAM_13270 IPR006037 Regulator of K+ conductance, C-terminal RAM_13275 IPR006036 Potassium uptake protein TrkA RAM_13275 IPR036291 NAD(P)-binding domain superfamily RAM_13275 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily RAM_13275 IPR003148 Regulator of K+ conductance, N-terminal RAM_13275 IPR006037 Regulator of K+ conductance, C-terminal RAM_13280 IPR002293 Amino acid/polyamine transporter I RAM_13285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_13285 IPR030391 RNA methyltransferase TrmA, conserved site RAM_13285 IPR010280 (Uracil-5)-methyltransferase family RAM_13285 IPR002792 TRAM domain RAM_13285 IPR012340 Nucleic acid-binding, OB-fold RAM_13300 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_13300 IPR005475 Transketolase-like, pyrimidine-binding domain RAM_13300 IPR005474 Transketolase, N-terminal RAM_13300 IPR033248 Transketolase, C-terminal domain RAM_13300 IPR020826 Transketolase binding site RAM_13300 IPR005477 Deoxyxylulose-5-phosphate synthase RAM_13300 IPR029061 Thiamin diphosphate-binding fold RAM_13305 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_13305 IPR028082 Periplasmic binding protein-like I RAM_13305 IPR000843 LacI-type HTH domain RAM_13315 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_13315 IPR017749 1-pyrroline dehydrogenase RAM_13315 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_13315 IPR015657 Aminobutyraldehyde dehydrogenase RAM_13315 IPR015590 Aldehyde dehydrogenase domain RAM_13315 IPR016161 Aldehyde/histidinol dehydrogenase RAM_13315 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_13320 IPR012846 Acetolactate synthase, large subunit, biosynthetic RAM_13320 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_13320 IPR039368 Acetolactate synthase large subunit, TPP binding domain RAM_13320 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_13320 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_13320 IPR029061 Thiamin diphosphate-binding fold RAM_13320 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_13320 IPR000399 TPP-binding enzyme, conserved site RAM_13325 IPR020855 Ureohydrolase, manganese-binding site RAM_13325 IPR005925 Agmatinase-related RAM_13325 IPR006035 Ureohydrolase RAM_13325 IPR023696 Ureohydrolase domain superfamily RAM_13335 IPR025736 PucR C-terminal helix-turn-helix domain RAM_13335 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_13340 IPR011006 CheY-like superfamily RAM_13340 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_13340 IPR039420 Transcriptional regulatory protein WalR-like RAM_13340 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_13340 IPR001789 Signal transduction response regulator, receiver domain RAM_13345 IPR005467 Histidine kinase domain RAM_13345 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_13345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_13345 IPR003594 Histidine kinase/HSP90-like ATPase RAM_13345 IPR003660 HAMP domain RAM_13345 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_13345 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_13350 IPR013094 Alpha/beta hydrolase fold-3 RAM_13350 IPR029058 Alpha/Beta hydrolase fold RAM_13365 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RAM_13365 IPR001753 Enoyl-CoA hydratase/isomerase RAM_13365 IPR029045 ClpP/crotonase-like domain superfamily RAM_13365 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_13365 IPR036291 NAD(P)-binding domain superfamily RAM_13365 IPR012802 Fatty oxidation complex, alpha subunit FadJ RAM_13365 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_13365 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_13370 IPR020615 Thiolase, acyl-enzyme intermediate active site RAM_13370 IPR020616 Thiolase, N-terminal RAM_13370 IPR020613 Thiolase, conserved site RAM_13370 IPR020617 Thiolase, C-terminal RAM_13370 IPR016039 Thiolase-like RAM_13370 IPR020610 Thiolase, active site RAM_13370 IPR012793 Beta-ketoadipyl CoA thiolase RAM_13370 IPR002155 Thiolase RAM_13385 IPR023631 Amidase signature domain RAM_13385 IPR014085 Allophanate hydrolase RAM_13385 IPR036928 Amidase signature (AS) superfamily RAM_13390 IPR011053 Single hybrid motif RAM_13390 IPR005481 Biotin carboxylase-like, N-terminal domain RAM_13390 IPR001882 Biotin-binding site RAM_13390 IPR011764 Biotin carboxylation domain RAM_13390 IPR011761 ATP-grasp fold RAM_13390 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RAM_13390 IPR000089 Biotin/lipoyl attachment RAM_13390 IPR011054 Rudiment single hybrid motif RAM_13390 IPR005482 Biotin carboxylase, C-terminal RAM_13390 IPR016185 Pre-ATP-grasp domain superfamily RAM_13395 IPR005481 Biotin carboxylase-like, N-terminal domain RAM_13395 IPR013815 ATP-grasp fold, subdomain 1 RAM_13395 IPR011764 Biotin carboxylation domain RAM_13395 IPR011761 ATP-grasp fold RAM_13395 IPR005482 Biotin carboxylase, C-terminal RAM_13395 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RAM_13395 IPR016185 Pre-ATP-grasp domain superfamily RAM_13395 IPR011054 Rudiment single hybrid motif RAM_13395 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RAM_13410 IPR002293 Amino acid/polyamine transporter I RAM_13410 IPR004758 Amino acid transporter RAM_13415 IPR009057 Homeobox-like domain superfamily RAM_13415 IPR001647 DNA-binding HTH domain, TetR-type RAM_13425 IPR001789 Signal transduction response regulator, receiver domain RAM_13425 IPR011006 CheY-like superfamily RAM_13425 IPR000792 Transcription regulator LuxR, C-terminal RAM_13425 IPR016032 Signal transduction response regulator, C-terminal effector RAM_13435 IPR006361 Uroporphyrinogen decarboxylase HemE RAM_13435 IPR038071 UROD/MetE-like superfamily RAM_13435 IPR000257 Uroporphyrinogen decarboxylase (URO-D) RAM_13450 IPR003673 CoA-transferase family III RAM_13450 IPR023606 CoA-transferase family III domain superfamily RAM_13460 IPR007801 Uncharacterised protein family UPF0276 RAM_13460 IPR036237 Xylose isomerase-like superfamily RAM_13475 IPR028427 Peptide methionine sulfoxide reductase RAM_13475 IPR002579 Peptide methionine sulphoxide reductase MrsB RAM_13475 IPR011057 Mss4-like superfamily RAM_13485 IPR005543 PASTA domain RAM_13485 IPR000719 Protein kinase domain RAM_13485 IPR008271 Serine/threonine-protein kinase, active site RAM_13485 IPR011009 Protein kinase-like domain superfamily RAM_13490 IPR032816 SNARE associated Golgi protein RAM_13490 IPR015414 Transmembrane protein TMEM64 RAM_13495 IPR012340 Nucleic acid-binding, OB-fold RAM_13495 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_13495 IPR012310 DNA ligase, ATP-dependent, central RAM_13495 IPR014143 DNA ligase D RAM_13495 IPR033651 LigD polymerase domain, PaeLigD-type RAM_13495 IPR014144 DNA ligase D, 3'-phosphoesterase domain RAM_13495 IPR014146 DNA ligase D, ligase domain RAM_13495 IPR014145 DNA ligase D, polymerase domain RAM_13505 IPR019949 Luciferase family oxidoreductase, group 1 RAM_13505 IPR011251 Luciferase-like domain RAM_13505 IPR036661 Luciferase-like domain superfamily RAM_13510 IPR012340 Nucleic acid-binding, OB-fold RAM_13510 IPR003029 S1 domain RAM_13510 IPR022967 RNA-binding domain, S1 RAM_13520 IPR025736 PucR C-terminal helix-turn-helix domain RAM_13520 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal RAM_13520 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_13520 IPR029016 GAF-like domain superfamily RAM_13520 IPR041522 CdaR, GGDEF-like domain RAM_13525 IPR015590 Aldehyde dehydrogenase domain RAM_13525 IPR016160 Aldehyde dehydrogenase, cysteine active site RAM_13525 IPR016161 Aldehyde/histidinol dehydrogenase RAM_13525 IPR005932 1-pyrroline-5-carboxylate dehydrogenase RAM_13525 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_13525 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_13540 IPR017937 Thioredoxin, conserved site RAM_13540 IPR036249 Thioredoxin-like superfamily RAM_13540 IPR013766 Thioredoxin domain RAM_13540 IPR005746 Thioredoxin RAM_13545 IPR020311 Uncharacterised protein family, Rv0898c RAM_13550 IPR011008 Dimeric alpha-beta barrel RAM_13550 IPR005545 YCII-related RAM_13560 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_13560 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_13560 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_13560 IPR014284 RNA polymerase sigma-70 like domain RAM_13560 IPR013325 RNA polymerase sigma factor, region 2 RAM_13560 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_13560 IPR007627 RNA polymerase sigma-70 region 2 RAM_13570 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_13570 IPR012340 Nucleic acid-binding, OB-fold RAM_13570 IPR012310 DNA ligase, ATP-dependent, central RAM_13595 IPR005531 Alkaline shock protein Asp23 RAM_13605 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_13605 IPR013325 RNA polymerase sigma factor, region 2 RAM_13605 IPR014286 RNA polymerase sigma-70 RpoE type RAM_13605 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_13605 IPR007627 RNA polymerase sigma-70 region 2 RAM_13605 IPR039425 RNA polymerase sigma-70 like RAM_13605 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_13605 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_13605 IPR014284 RNA polymerase sigma-70 like domain RAM_13625 IPR006076 FAD dependent oxidoreductase RAM_13625 IPR023209 D-amino-acid oxidase RAM_13630 IPR013738 Beta-galactosidase trimerisation RAM_13630 IPR013739 Beta-galactosidase C-terminal RAM_13630 IPR013529 Glycoside hydrolase, family 42, N-terminal RAM_13630 IPR013780 Glycosyl hydrolase, all-beta RAM_13630 IPR017853 Glycoside hydrolase superfamily RAM_13630 IPR029062 Class I glutamine amidotransferase-like RAM_13630 IPR003476 Glycoside hydrolase, family 42 RAM_13640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_13640 IPR015424 Pyridoxal phosphate-dependent transferase RAM_13640 IPR034757 Ornithine aminotransferase, bacterial type RAM_13640 IPR010164 Ornithine aminotransferase RAM_13640 IPR005814 Aminotransferase class-III RAM_13640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_13645 IPR036390 Winged helix DNA-binding domain superfamily RAM_13645 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_13645 IPR011991 ArsR-like helix-turn-helix domain RAM_13645 IPR001845 HTH ArsR-type DNA-binding domain RAM_13655 IPR022488 Polyphosphate kinase-2-related RAM_13655 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 RAM_13655 IPR016898 Polyphosphate kinase 2 RAM_13655 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_13660 IPR002469 Dipeptidylpeptidase IV, N-terminal domain RAM_13660 IPR029058 Alpha/Beta hydrolase fold RAM_13660 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RAM_13660 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily RAM_13670 IPR003691 Putative fluoride ion transporter CrcB RAM_13675 IPR003793 Domain of unknown function DUF190 RAM_13675 IPR011322 Nitrogen regulatory PII-like, alpha/beta RAM_13675 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RAM_13680 IPR003691 Putative fluoride ion transporter CrcB RAM_13685 IPR002129 Pyridoxal phosphate-dependent decarboxylase RAM_13685 IPR021115 Pyridoxal-phosphate binding site RAM_13685 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_13685 IPR015424 Pyridoxal phosphate-dependent transferase RAM_13690 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_13690 IPR031043 Putative histamine N-monooxygenase RAM_13690 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RAM_13695 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RAM_13695 IPR022770 Ferric iron reductase FhuF domain RAM_13695 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like RAM_13700 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_13700 IPR036651 Glutamine synthetase, N-terminal domain superfamily RAM_13700 IPR008146 Glutamine synthetase, catalytic domain RAM_13705 IPR012951 Berberine/berberine-like RAM_13705 IPR006094 FAD linked oxidase, N-terminal RAM_13705 IPR016166 FAD-binding domain, PCMH-type RAM_13705 IPR006093 Oxygen oxidoreductase covalent FAD-binding site RAM_13705 IPR036318 FAD-binding, type PCMH-like superfamily RAM_13705 IPR016167 FAD-binding, type PCMH, subdomain 1 RAM_13705 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_13705 IPR016164 FAD-linked oxidase-like, C-terminal RAM_13710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_13710 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_13710 IPR041664 Orc1-like, AAA ATPase domain RAM_13710 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase RAM_13710 IPR029787 Nucleotide cyclase RAM_13715 IPR022962 Soluble pyridine nucleotide transhydrogenase RAM_13715 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RAM_13715 IPR023753 FAD/NAD(P)-binding domain RAM_13715 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_13715 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_13715 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RAM_13725 IPR007197 Radical SAM RAM_13725 IPR013785 Aldolase-type TIM barrel RAM_13725 IPR006638 Elp3/MiaB/NifB RAM_13725 IPR040086 Protein MJ0683-like RAM_13725 IPR040086 Protein MJ0683-like RAM_13725 IPR013785 Aldolase-type TIM barrel RAM_13725 IPR007197 Radical SAM RAM_13725 IPR006638 Elp3/MiaB/NifB RAM_13735 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RAM_13735 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RAM_13735 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RAM_13735 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_13735 IPR004524 Aspartate-tRNA ligase, type 1 RAM_13735 IPR004115 GAD-like domain superfamily RAM_13735 IPR029351 GAD domain RAM_13735 IPR012340 Nucleic acid-binding, OB-fold RAM_13760 IPR002397 Cytochrome P450, B-class RAM_13760 IPR001128 Cytochrome P450 RAM_13760 IPR036396 Cytochrome P450 superfamily RAM_13760 IPR017972 Cytochrome P450, conserved site RAM_13765 IPR001647 DNA-binding HTH domain, TetR-type RAM_13765 IPR009057 Homeobox-like domain superfamily RAM_13770 IPR003593 AAA+ ATPase domain RAM_13770 IPR003959 ATPase, AAA-type, core RAM_13770 IPR021886 MgsA AAA+ ATPase C-terminal RAM_13770 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_13770 IPR032423 AAA C-terminal domain RAM_13770 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RAM_13780 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_13780 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_13780 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RAM_13780 IPR036291 NAD(P)-binding domain superfamily RAM_13780 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RAM_13780 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RAM_13795 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RAM_13795 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal RAM_13795 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria RAM_13795 IPR003156 DHHA1 domain RAM_13795 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily RAM_13795 IPR009000 Translation protein, beta-barrel domain superfamily RAM_13795 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily RAM_13795 IPR002318 Alanine-tRNA ligase, class IIc RAM_13795 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain RAM_13800 IPR037027 YqgF/RNase H-like domain superfamily RAM_13800 IPR005227 Putative pre-16S rRNA nuclease RAM_13800 IPR012337 Ribonuclease H-like superfamily RAM_13800 IPR006641 YqgF/RNase H-like domain RAM_13805 IPR003770 Endolytic murein transglycosylase RAM_13810 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RAM_13810 IPR022893 Shikimate dehydrogenase family RAM_13810 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal RAM_13810 IPR011342 Shikimate dehydrogenase RAM_13810 IPR041121 SDH, C-terminal RAM_13810 IPR036291 NAD(P)-binding domain superfamily RAM_13815 IPR007344 GrpB/Dephospho-CoA kinase RAM_13820 IPR009057 Homeobox-like domain superfamily RAM_13820 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_13820 IPR032551 HTH-type transcriptional repressor, C-terminal RAM_13820 IPR001647 DNA-binding HTH domain, TetR-type RAM_13830 IPR024981 Domain of unknown function DUF3887 RAM_13830 IPR022742 Serine aminopeptidase, S33 RAM_13830 IPR029058 Alpha/Beta hydrolase fold RAM_13840 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RAM_13840 IPR036291 NAD(P)-binding domain superfamily RAM_13840 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RAM_13840 IPR029009 Allosteric substrate binding domain superfamily RAM_13840 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RAM_13840 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RAM_13840 IPR006236 D-3-phosphoglycerate dehydrogenase RAM_13840 IPR002912 ACT domain RAM_13850 IPR035895 HPr-like superfamily RAM_13850 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RAM_13850 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RAM_13850 IPR000032 Phosphocarrier protein HPr-like RAM_13855 IPR003352 Phosphotransferase system, EIIC RAM_13855 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component RAM_13855 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RAM_13855 IPR036878 Glucose permease domain IIB RAM_13855 IPR013013 Phosphotransferase system, EIIC component, type 1 RAM_13855 IPR001996 Phosphotransferase system, IIB component, type 1 RAM_13865 IPR036878 Glucose permease domain IIB RAM_13865 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RAM_13865 IPR003352 Phosphotransferase system, EIIC RAM_13865 IPR013013 Phosphotransferase system, EIIC component, type 1 RAM_13865 IPR001996 Phosphotransferase system, IIB component, type 1 RAM_13865 IPR011301 PTS system, maltose/glucose-specific IIBC component RAM_13865 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component RAM_13870 IPR011055 Duplicated hybrid motif RAM_13870 IPR036878 Glucose permease domain IIB RAM_13870 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RAM_13870 IPR003352 Phosphotransferase system, EIIC RAM_13870 IPR013013 Phosphotransferase system, EIIC component, type 1 RAM_13870 IPR001996 Phosphotransferase system, IIB component, type 1 RAM_13870 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 RAM_13885 IPR013325 RNA polymerase sigma factor, region 2 RAM_13885 IPR039425 RNA polymerase sigma-70 like RAM_13885 IPR014284 RNA polymerase sigma-70 like domain RAM_13885 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_13885 IPR007627 RNA polymerase sigma-70 region 2 RAM_13885 IPR007630 RNA polymerase sigma-70 region 4 RAM_13885 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_13885 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_13895 IPR035904 Chorismate synthase AroC superfamily RAM_13895 IPR020541 Chorismate synthase, conserved site RAM_13895 IPR000453 Chorismate synthase RAM_13900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_13900 IPR031322 Shikimate kinase/gluconokinase RAM_13900 IPR000623 Shikimate kinase/Threonine synthase-like 1 RAM_13900 IPR023000 Shikimate kinase, conserved site RAM_13905 IPR030960 3-dehydroquinate synthase domain RAM_13905 IPR030963 3-dehydroquinate synthase family RAM_13905 IPR016037 3-dehydroquinate synthase AroB RAM_13910 IPR001874 Dehydroquinase, class II RAM_13910 IPR036441 Dehydroquinase, class II superfamily RAM_13910 IPR018509 Dehydroquinase, class II, conserved site RAM_13915 IPR037523 Vicinal oxygen chelate (VOC) domain RAM_13915 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RAM_13930 IPR000994 Peptidase M24 RAM_13930 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RAM_13930 IPR036005 Creatinase/aminopeptidase-like RAM_13930 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RAM_13930 IPR000587 Creatinase, N-terminal RAM_13935 IPR011768 Translation elongation factor P RAM_13935 IPR008991 Translation protein SH3-like domain superfamily RAM_13935 IPR012340 Nucleic acid-binding, OB-fold RAM_13935 IPR014722 Ribosomal protein L2, domain 2 RAM_13935 IPR013185 Translation elongation factor, KOW-like RAM_13935 IPR015365 Elongation factor P, C-terminal RAM_13935 IPR020599 Translation elongation factor P/YeiP RAM_13935 IPR013852 Translation elongation factor P/YeiP, conserved site RAM_13935 IPR001059 Translation elongation factor P/YeiP, central RAM_13940 IPR011605 NusB antitermination factor RAM_13940 IPR035926 NusB-like superfamily RAM_13940 IPR006027 NusB/RsmB/TIM44 RAM_13955 IPR000836 Phosphoribosyltransferase domain RAM_13955 IPR029057 Phosphoribosyltransferase-like RAM_13955 IPR023050 Bifunctional protein PyrR RAM_13960 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RAM_13960 IPR002082 Aspartate carbamoyltransferase RAM_13960 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily RAM_13960 IPR006130 Aspartate/ornithine carbamoyltransferase RAM_13960 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RAM_13965 IPR004722 Dihydroorotase RAM_13965 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_13965 IPR006680 Amidohydrolase-related RAM_13965 IPR032466 Metal-dependent hydrolase RAM_13965 IPR002195 Dihydroorotase, conserved site RAM_13975 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain RAM_13975 IPR029062 Class I glutamine amidotransferase-like RAM_13975 IPR006274 Carbamoyl-phosphate synthase, small subunit RAM_13975 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain RAM_13975 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily RAM_13975 IPR017926 Glutamine amidotransferase RAM_13980 IPR003959 ATPase, AAA-type, core RAM_13980 IPR029012 Helix hairpin bin domain superfamily RAM_13980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_13980 IPR013134 RAD50, zinc hook RAM_13990 IPR036914 Methylglyoxal synthase-like domain superfamily RAM_13990 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain RAM_13990 IPR016185 Pre-ATP-grasp domain superfamily RAM_13990 IPR006275 Carbamoyl-phosphate synthase, large subunit RAM_13990 IPR011607 Methylglyoxal synthase-like domain RAM_13990 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RAM_13990 IPR011761 ATP-grasp fold RAM_13990 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain RAM_13990 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily RAM_13990 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain RAM_13995 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 RAM_13995 IPR001754 Orotidine 5'-phosphate decarboxylase domain RAM_13995 IPR013785 Aldolase-type TIM barrel RAM_13995 IPR011060 Ribulose-phosphate binding barrel RAM_13995 IPR018089 Orotidine 5'-phosphate decarboxylase, active site RAM_14005 IPR020590 Guanylate kinase, conserved site RAM_14005 IPR017665 Guanylate kinase RAM_14005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_14005 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RAM_14005 IPR008144 Guanylate kinase-like domain RAM_14010 IPR003716 DNA-directed RNA polymerase, omega subunit RAM_14010 IPR006110 RNA polymerase, subunit omega/K/RPB6 RAM_14010 IPR012293 RNA polymerase subunit, RPB6/omega RAM_14010 IPR036161 RPB6/omega subunit-like superfamily RAM_14015 IPR035929 CoaB-like superfamily RAM_14015 IPR003382 Flavoprotein RAM_14015 IPR036551 Flavin prenyltransferase-like RAM_14015 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC RAM_14015 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal RAM_14020 IPR022628 S-adenosylmethionine synthetase, N-terminal RAM_14020 IPR022631 S-adenosylmethionine synthetase, conserved site RAM_14020 IPR022629 S-adenosylmethionine synthetase, central domain RAM_14020 IPR002133 S-adenosylmethionine synthetase RAM_14020 IPR022636 S-adenosylmethionine synthetase superfamily RAM_14020 IPR022630 S-adenosylmethionine synthetase, C-terminal RAM_14025 IPR041222 Primosomal protein N', 3' DNA-binding domain RAM_14025 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily RAM_14025 IPR005259 Primosomal protein N' RAM_14045 IPR000101 Gamma-glutamyltranspeptidase RAM_14045 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_14050 IPR005794 Methionyl-tRNA formyltransferase RAM_14050 IPR005793 Formyl transferase, C-terminal RAM_14050 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain RAM_14050 IPR037022 Formyl transferase, C-terminal domain superfamily RAM_14050 IPR002376 Formyl transferase, N-terminal RAM_14050 IPR036477 Formyl transferase, N-terminal domain superfamily RAM_14050 IPR011034 Formyl transferase-like, C-terminal domain superfamily RAM_14055 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site RAM_14055 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type RAM_14055 IPR035926 NusB-like superfamily RAM_14055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_14055 IPR006027 NusB/RsmB/TIM44 RAM_14055 IPR023267 RNA (C5-cytosine) methyltransferase RAM_14060 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal RAM_14060 IPR036551 Flavin prenyltransferase-like RAM_14060 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC RAM_14060 IPR003382 Flavoprotein RAM_14060 IPR035929 CoaB-like superfamily RAM_14065 IPR001466 Beta-lactamase-related RAM_14065 IPR012338 Beta-lactamase/transpeptidase-like RAM_14070 IPR017850 Alkaline-phosphatase-like, core domain superfamily RAM_14070 IPR018299 Alkaline phosphatase, active site RAM_14070 IPR001952 Alkaline phosphatase RAM_14075 IPR011006 CheY-like superfamily RAM_14075 IPR001789 Signal transduction response regulator, receiver domain RAM_14075 IPR000792 Transcription regulator LuxR, C-terminal RAM_14075 IPR016032 Signal transduction response regulator, C-terminal effector RAM_14080 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_14080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_14080 IPR003594 Histidine kinase/HSP90-like ATPase RAM_14085 IPR013785 Aldolase-type TIM barrel RAM_14085 IPR011060 Ribulose-phosphate binding barrel RAM_14085 IPR026019 Ribulose-phosphate 3-epimerase RAM_14085 IPR000056 Ribulose-phosphate 3-epimerase-like RAM_14090 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily RAM_14090 IPR001783 Lumazine-binding protein RAM_14090 IPR017938 Riboflavin synthase-like beta-barrel RAM_14090 IPR026017 Lumazine-binding domain RAM_14095 IPR032677 GTP cyclohydrolase II RAM_14095 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RAM_14095 IPR016299 Riboflavin biosynthesis protein RibBA RAM_14095 IPR036144 RibA-like superfamily RAM_14095 IPR000926 GTP cyclohydrolase II, RibA RAM_14095 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RAM_14100 IPR002180 Lumazine/riboflavin synthase RAM_14100 IPR034964 Lumazine synthase RAM_14100 IPR036467 Lumazine/riboflavin synthase superfamily RAM_14105 IPR019692 Protein of unknown function DUF2581 RAM_14120 IPR035901 GIY-YIG endonuclease superfamily RAM_14120 IPR038476 UvrC homology region 2 superfamily RAM_14120 IPR000305 GIY-YIG endonuclease RAM_14120 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RAM_14120 IPR010994 RuvA domain 2-like RAM_14120 IPR001943 UVR domain RAM_14120 IPR036876 UVR domain superfamily RAM_14120 IPR004791 UvrABC system, subunit C RAM_14120 IPR001162 UvrC family homology region RAM_14125 IPR005337 RapZ-like family RAM_14125 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_14130 IPR038136 Gluconeogenesis factor superfamily RAM_14130 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 RAM_14130 IPR010119 Gluconeogenesis factor RAM_14135 IPR023054 Sporulation regulator WhiA, C-terminal RAM_14135 IPR039518 WhiA, LAGLIDADG-like domain RAM_14135 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain RAM_14135 IPR027434 Homing endonuclease RAM_14135 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_14135 IPR003802 Sporulation regulator WhiA RAM_14140 IPR029044 Nucleotide-diphospho-sugar transferases RAM_14140 IPR001173 Glycosyltransferase 2-like RAM_14145 IPR006694 Fatty acid hydroxylase RAM_14165 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_14165 IPR017853 Glycoside hydrolase superfamily RAM_14165 IPR013783 Immunoglobulin-like fold RAM_14165 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain RAM_14165 IPR028829 Exo-beta-D-glucosaminidase RAM_14165 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_14165 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_14165 IPR008979 Galactose-binding-like domain superfamily RAM_14165 IPR005084 Carbohydrate binding module family 6 RAM_14170 IPR001260 Coproporphyrinogen III oxidase, aerobic RAM_14170 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily RAM_14170 IPR018375 Coproporphyrinogen III oxidase, conserved site RAM_14210 IPR001123 Amino acid exporter protein, LeuE-type RAM_14220 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RAM_14220 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RAM_14220 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RAM_14220 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RAM_14220 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RAM_14220 IPR036291 NAD(P)-binding domain superfamily RAM_14225 IPR001576 Phosphoglycerate kinase RAM_14225 IPR015911 Phosphoglycerate kinase, conserved site RAM_14225 IPR015824 Phosphoglycerate kinase, N-terminal RAM_14225 IPR036043 Phosphoglycerate kinase superfamily RAM_14230 IPR035990 Triosephosphate isomerase superfamily RAM_14230 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic RAM_14230 IPR020861 Triosephosphate isomerase, active site RAM_14230 IPR000652 Triosephosphate isomerase RAM_14230 IPR013785 Aldolase-type TIM barrel RAM_14235 IPR004692 Preprotein translocase SecG subunit RAM_14245 IPR017171 Signal transduction histidine kinase, MctS RAM_14245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_14245 IPR003594 Histidine kinase/HSP90-like ATPase RAM_14245 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_14245 IPR033480 Single Cache domain 2 RAM_14250 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase RAM_14250 IPR037171 NagB/RpiA transferase-like RAM_14250 IPR039104 6-Phosphogluconolactonase RAM_14250 IPR005900 6-phosphogluconolactonase, DevB-type RAM_14260 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal RAM_14260 IPR001282 Glucose-6-phosphate dehydrogenase RAM_14260 IPR019796 Glucose-6-phosphate dehydrogenase, active site RAM_14260 IPR036291 NAD(P)-binding domain superfamily RAM_14260 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding RAM_14265 IPR035476 Phosphoglucose isomerase, SIS domain 1 RAM_14265 IPR035482 Phosphoglucose isomerase, SIS domain 2 RAM_14265 IPR001672 Phosphoglucose isomerase (PGI) RAM_14265 IPR018189 Phosphoglucose isomerase, conserved site RAM_14270 IPR004732 Transaldolase type 2 RAM_14270 IPR018225 Transaldolase, active site RAM_14270 IPR013785 Aldolase-type TIM barrel RAM_14270 IPR001585 Transaldolase/Fructose-6-phosphate aldolase RAM_14275 IPR005478 Transketolase, bacterial-like RAM_14275 IPR005475 Transketolase-like, pyrimidine-binding domain RAM_14275 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_14275 IPR029061 Thiamin diphosphate-binding fold RAM_14275 IPR020826 Transketolase binding site RAM_14275 IPR033248 Transketolase, C-terminal domain RAM_14275 IPR033247 Transketolase family RAM_14275 IPR005474 Transketolase, N-terminal RAM_14280 IPR000537 UbiA prenyltransferase family RAM_14280 IPR006369 Protohaem IX farnesyltransferase RAM_14315 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RAM_14320 IPR013154 Alcohol dehydrogenase, N-terminal RAM_14320 IPR011032 GroES-like superfamily RAM_14320 IPR036291 NAD(P)-binding domain superfamily RAM_14320 IPR020843 Polyketide synthase, enoylreductase domain RAM_14320 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_14320 IPR013149 Alcohol dehydrogenase, C-terminal RAM_14330 IPR011761 ATP-grasp fold RAM_14365 IPR003439 ABC transporter-like RAM_14365 IPR003593 AAA+ ATPase domain RAM_14365 IPR017871 ABC transporter, conserved site RAM_14365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_14365 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_14365 IPR025302 Domain of unknown function DUF4162 RAM_14380 IPR004042 Intein DOD homing endonuclease RAM_14380 IPR003586 Hint domain C-terminal RAM_14380 IPR003587 Hint domain N-terminal RAM_14380 IPR036844 Hint domain superfamily RAM_14380 IPR027434 Homing endonuclease RAM_14380 IPR006142 Intein RAM_14380 IPR037284 SUF system FeS cluster assembly, SufBD superfamily RAM_14380 IPR030934 Intein C-terminal splicing region RAM_14380 IPR006141 Intein N-terminal splicing region RAM_14380 IPR010231 SUF system FeS cluster assembly, SufB RAM_14380 IPR000825 SUF system FeS cluster assembly, SufBD RAM_14385 IPR000825 SUF system FeS cluster assembly, SufBD RAM_14385 IPR011542 SUF system FeS cluster assembly, SufD RAM_14385 IPR037284 SUF system FeS cluster assembly, SufBD superfamily RAM_14390 IPR003593 AAA+ ATPase domain RAM_14390 IPR003439 ABC transporter-like RAM_14390 IPR017871 ABC transporter, conserved site RAM_14390 IPR010230 FeS cluster assembly SUF system, ATPase SufC RAM_14390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_14395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_14395 IPR015424 Pyridoxal phosphate-dependent transferase RAM_14395 IPR010970 Cysteine desulfurase, SufS RAM_14395 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RAM_14395 IPR000192 Aminotransferase class V domain RAM_14395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_14400 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal RAM_14405 IPR002744 MIP18 family-like RAM_14405 IPR034904 Fe-S cluster assembly domain superfamily RAM_14415 IPR003844 Uncharacterised protein family UPF0060 RAM_14425 IPR011009 Protein kinase-like domain superfamily RAM_14425 IPR000719 Protein kinase domain RAM_14425 IPR004147 UbiB domain RAM_14430 IPR024079 Metallopeptidase, catalytic domain superfamily RAM_14430 IPR000013 Peptidase M7, snapalysin RAM_14435 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_14435 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_14435 IPR003594 Histidine kinase/HSP90-like ATPase RAM_14440 IPR016032 Signal transduction response regulator, C-terminal effector RAM_14440 IPR000792 Transcription regulator LuxR, C-terminal RAM_14440 IPR001789 Signal transduction response regulator, receiver domain RAM_14440 IPR011006 CheY-like superfamily RAM_14445 IPR004033 UbiE/COQ5 methyltransferase RAM_14445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_14455 IPR031157 Tr-type G domain, conserved site RAM_14455 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RAM_14455 IPR000795 Transcription factor, GTP-binding domain RAM_14455 IPR002891 Adenylyl-sulfate kinase RAM_14455 IPR009000 Translation protein, beta-barrel domain superfamily RAM_14455 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_14455 IPR011779 Sulphate adenylyltransferase, large subunit RAM_14455 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain RAM_14460 IPR011784 Sulphate adenylyltransferase, small subunit RAM_14460 IPR002500 Phosphoadenosine phosphosulphate reductase RAM_14460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_14475 IPR023985 Mycofactocin-dependent oxidoreductase RAM_14475 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_14475 IPR036291 NAD(P)-binding domain superfamily RAM_14475 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_14480 IPR019734 Tetratricopeptide repeat RAM_14480 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_14480 IPR013026 Tetratricopeptide repeat-containing domain RAM_14480 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_14510 IPR035919 EAL domain superfamily RAM_14510 IPR000160 GGDEF domain RAM_14510 IPR005330 MHYT domain RAM_14510 IPR029787 Nucleotide cyclase RAM_14510 IPR001633 EAL domain RAM_14530 IPR006261 dNTP triphosphohydrolase RAM_14530 IPR023023 dNTP triphosphohydrolase, type 2 RAM_14530 IPR003607 HD/PDEase domain RAM_14530 IPR026875 Phosphohydrolase-associated domain RAM_14530 IPR006674 HD domain RAM_14560 IPR011251 Luciferase-like domain RAM_14560 IPR036661 Luciferase-like domain superfamily RAM_14560 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted RAM_14570 IPR017871 ABC transporter, conserved site RAM_14570 IPR003439 ABC transporter-like RAM_14570 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_14570 IPR011527 ABC transporter type 1, transmembrane domain RAM_14570 IPR011917 ABC transporter, lipid A export, MsbA RAM_14570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_14570 IPR003593 AAA+ ATPase domain RAM_14570 IPR039421 Type I protein exporter RAM_14580 IPR001347 Sugar isomerase (SIS) RAM_14580 IPR035472 RpiR-like, SIS domain RAM_14580 IPR022951 Uncharacterised protein family UPF0309 RAM_14590 IPR003333 Mycolic acid cyclopropane synthase RAM_14590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_14595 IPR004474 Cell envelope-related transcriptional attenuator domain RAM_14600 IPR016181 Acyl-CoA N-acyltransferase RAM_14600 IPR000182 GNAT domain RAM_14605 IPR024706 Peroxiredoxin, AhpC-type RAM_14605 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RAM_14605 IPR013766 Thioredoxin domain RAM_14605 IPR036249 Thioredoxin-like superfamily RAM_14610 IPR035919 EAL domain superfamily RAM_14610 IPR035965 PAS domain superfamily RAM_14610 IPR001633 EAL domain RAM_14610 IPR029787 Nucleotide cyclase RAM_14610 IPR005330 MHYT domain RAM_14610 IPR000160 GGDEF domain RAM_14615 IPR036396 Cytochrome P450 superfamily RAM_14615 IPR017972 Cytochrome P450, conserved site RAM_14615 IPR001128 Cytochrome P450 RAM_14615 IPR002403 Cytochrome P450, E-class, group IV RAM_14625 IPR000086 NUDIX hydrolase domain RAM_14625 IPR015797 NUDIX hydrolase-like domain superfamily RAM_14625 IPR020476 NUDIX hydrolase RAM_14625 IPR020084 NUDIX hydrolase, conserved site RAM_14625 IPR022927 RNA pyrophosphohydrolase RppH RAM_14630 IPR000358 Ribonucleotide reductase small subunit family RAM_14630 IPR033909 Ribonucleotide reductase small subunit RAM_14630 IPR009078 Ferritin-like superfamily RAM_14630 IPR012348 Ribonucleotide reductase-like RAM_14635 IPR039718 Ribonucleoside-diphosphate reductase large subunit RAM_14635 IPR013509 Ribonucleotide reductase large subunit, N-terminal RAM_14635 IPR000788 Ribonucleotide reductase large subunit, C-terminal RAM_14635 IPR013346 Ribonucleotide reductase, class I , alpha subunit RAM_14635 IPR005144 ATP-cone domain RAM_14635 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RAM_14645 IPR001753 Enoyl-CoA hydratase/isomerase RAM_14645 IPR029045 ClpP/crotonase-like domain superfamily RAM_14645 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_14660 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type RAM_14660 IPR017518 Conserved hypothetical protein CHP03084 RAM_14660 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain RAM_14660 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_14660 IPR013917 tRNA wybutosine-synthesis RAM_14670 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_14670 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_14670 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_14670 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_14670 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_14670 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_14670 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_14675 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RAM_14675 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RAM_14675 IPR029045 ClpP/crotonase-like domain superfamily RAM_14675 IPR034733 Acetyl-CoA carboxylase RAM_14680 IPR000089 Biotin/lipoyl attachment RAM_14680 IPR011761 ATP-grasp fold RAM_14680 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RAM_14680 IPR005482 Biotin carboxylase, C-terminal RAM_14680 IPR011764 Biotin carboxylation domain RAM_14680 IPR001882 Biotin-binding site RAM_14680 IPR011054 Rudiment single hybrid motif RAM_14680 IPR011053 Single hybrid motif RAM_14680 IPR005481 Biotin carboxylase-like, N-terminal domain RAM_14680 IPR016185 Pre-ATP-grasp domain superfamily RAM_14685 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_14685 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_14685 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_14685 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_14685 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_14685 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_14690 IPR036291 NAD(P)-binding domain superfamily RAM_14690 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_14690 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_14705 IPR004268 Peptidoglycan biosynthesis protein MurJ RAM_14705 IPR011009 Protein kinase-like domain superfamily RAM_14715 IPR017853 Glycoside hydrolase superfamily RAM_14720 IPR033416 Periplasmic sensor domain CHASE7 RAM_14720 IPR000160 GGDEF domain RAM_14720 IPR029787 Nucleotide cyclase RAM_14730 IPR027443 Isopenicillin N synthase-like RAM_14730 IPR026992 Non-haem dioxygenase N-terminal domain RAM_14730 IPR005123 Oxoglutarate/iron-dependent dioxygenase RAM_14750 IPR023769 Nucleoid occlusion factor SlmA RAM_14750 IPR001647 DNA-binding HTH domain, TetR-type RAM_14750 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_14750 IPR009057 Homeobox-like domain superfamily RAM_14755 IPR016039 Thiolase-like RAM_14755 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal RAM_14755 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RAM_14755 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RAM_14760 IPR009057 Homeobox-like domain superfamily RAM_14760 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_14760 IPR001647 DNA-binding HTH domain, TetR-type RAM_14765 IPR000772 Ricin B, lectin domain RAM_14765 IPR035992 Ricin B-like lectins RAM_14765 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RAM_14765 IPR005193 Glycoside hydrolase, family 62, arabinosidase RAM_14795 IPR001647 DNA-binding HTH domain, TetR-type RAM_14795 IPR009057 Homeobox-like domain superfamily RAM_14795 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_14795 IPR041347 MftR, C-terminal RAM_14800 IPR009061 Putative DNA-binding domain superfamily RAM_14800 IPR011789 Cu(I)-responsive transcriptional regulator RAM_14800 IPR000551 MerR-type HTH domain RAM_14815 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain RAM_14815 IPR029030 Caspase-like domain superfamily RAM_14815 IPR020472 G-protein beta WD-40 repeat RAM_14815 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_14815 IPR038765 Papain-like cysteine peptidase superfamily RAM_14815 IPR036322 WD40-repeat-containing domain superfamily RAM_14815 IPR015943 WD40/YVTN repeat-like-containing domain superfamily RAM_14815 IPR001680 WD40 repeat RAM_14815 IPR019775 WD40 repeat, conserved site RAM_14815 IPR017986 WD40-repeat-containing domain RAM_14820 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_14820 IPR002938 FAD-binding domain RAM_14835 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_14835 IPR002938 FAD-binding domain RAM_14895 IPR029058 Alpha/Beta hydrolase fold RAM_14895 IPR000073 Alpha/beta hydrolase fold-1 RAM_14905 IPR000792 Transcription regulator LuxR, C-terminal RAM_14905 IPR001789 Signal transduction response regulator, receiver domain RAM_14905 IPR016032 Signal transduction response regulator, C-terminal effector RAM_14905 IPR011006 CheY-like superfamily RAM_14975 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_14975 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_14975 IPR036291 NAD(P)-binding domain superfamily RAM_14985 IPR036390 Winged helix DNA-binding domain superfamily RAM_14985 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_14985 IPR000835 MarR-type HTH domain RAM_15000 IPR003333 Mycolic acid cyclopropane synthase RAM_15000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_15015 IPR013325 RNA polymerase sigma factor, region 2 RAM_15015 IPR039425 RNA polymerase sigma-70 like RAM_15015 IPR014284 RNA polymerase sigma-70 like domain RAM_15015 IPR007627 RNA polymerase sigma-70 region 2 RAM_15015 IPR007630 RNA polymerase sigma-70 region 4 RAM_15015 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_15015 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_15025 IPR020805 Cell division protein FtsZ, conserved site RAM_15025 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RAM_15025 IPR024757 Cell division protein FtsZ, C-terminal RAM_15025 IPR008280 Tubulin/FtsZ, C-terminal RAM_15025 IPR036525 Tubulin/FtsZ, GTPase domain superfamily RAM_15025 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily RAM_15025 IPR003008 Tubulin/FtsZ, GTPase domain RAM_15025 IPR000158 Cell division protein FtsZ RAM_15035 IPR001608 Alanine racemase, N-terminal RAM_15035 IPR029066 PLP-binding barrel RAM_15035 IPR011078 Pyridoxal phosphate homeostasis protein RAM_15040 IPR038594 SepF-like superfamily RAM_15040 IPR007561 Cell division protein SepF/SepF-related RAM_15040 IPR023052 Cell division protein SepF RAM_15050 IPR007793 DivIVA family RAM_15050 IPR019933 DivIVA domain RAM_15060 IPR011991 ArsR-like helix-turn-helix domain RAM_15060 IPR001845 HTH ArsR-type DNA-binding domain RAM_15060 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_15060 IPR036390 Winged helix DNA-binding domain superfamily RAM_15065 IPR020846 Major facilitator superfamily domain RAM_15065 IPR036259 MFS transporter superfamily RAM_15065 IPR011701 Major facilitator superfamily RAM_15070 IPR002300 Aminoacyl-tRNA synthetase, class Ia RAM_15070 IPR023586 Isoleucine-tRNA ligase, type 2 RAM_15070 IPR002301 Isoleucine-tRNA ligase RAM_15070 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RAM_15070 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RAM_15070 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain RAM_15070 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RAM_15070 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RAM_15070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_15080 IPR011991 ArsR-like helix-turn-helix domain RAM_15080 IPR001845 HTH ArsR-type DNA-binding domain RAM_15080 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_15080 IPR036390 Winged helix DNA-binding domain superfamily RAM_15085 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_15085 IPR036318 FAD-binding, type PCMH-like superfamily RAM_15085 IPR038770 Sodium/solute symporter superfamily RAM_15085 IPR005170 Transporter-associated domain RAM_15085 IPR023729 K(+)/H(+) antiporter NhaP2 RAM_15085 IPR006037 Regulator of K+ conductance, C-terminal RAM_15085 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily RAM_15085 IPR006153 Cation/H+ exchanger RAM_15085 IPR030151 K(+)/H(+) antiporter NhaP RAM_15090 IPR000192 Aminotransferase class V domain RAM_15090 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RAM_15090 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA RAM_15090 IPR015424 Pyridoxal phosphate-dependent transferase RAM_15090 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_15090 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_15100 IPR001872 Peptidase A8, signal peptidase II RAM_15105 IPR036986 RNA-binding S4 domain superfamily RAM_15105 IPR006145 Pseudouridine synthase, RsuA/RluA RAM_15105 IPR006225 Pseudouridine synthase, RluC/RluD RAM_15105 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RAM_15105 IPR020103 Pseudouridine synthase, catalytic domain superfamily RAM_15105 IPR002942 RNA-binding S4 domain RAM_15125 IPR036661 Luciferase-like domain superfamily RAM_15125 IPR011251 Luciferase-like domain RAM_15125 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c RAM_15135 IPR003695 Ppx/GppA phosphatase RAM_15145 IPR008928 Six-hairpin glycosidase superfamily RAM_15145 IPR012341 Six-hairpin glycosidase-like superfamily RAM_15145 IPR005194 Glycoside hydrolase family 65, C-terminal RAM_15145 IPR005196 Glycoside hydrolase, family 65, N-terminal RAM_15145 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase RAM_15145 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily RAM_15145 IPR011013 Galactose mutarotase-like domain superfamily RAM_15145 IPR005195 Glycoside hydrolase, family 65, central catalytic RAM_15150 IPR041492 Haloacid dehalogenase-like hydrolase RAM_15150 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RAM_15150 IPR023214 HAD superfamily RAM_15150 IPR010976 Beta-phosphoglucomutase hydrolase RAM_15150 IPR036412 HAD-like superfamily RAM_15150 IPR006439 HAD hydrolase, subfamily IA RAM_15155 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_15155 IPR001845 HTH ArsR-type DNA-binding domain RAM_15155 IPR011991 ArsR-like helix-turn-helix domain RAM_15155 IPR036390 Winged helix DNA-binding domain superfamily RAM_15180 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_15180 IPR000600 ROK family RAM_15180 IPR036390 Winged helix DNA-binding domain superfamily RAM_15190 IPR004294 Carotenoid oxygenase RAM_15210 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_15210 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_15210 IPR013325 RNA polymerase sigma factor, region 2 RAM_15210 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_15210 IPR007627 RNA polymerase sigma-70 region 2 RAM_15210 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_15210 IPR039425 RNA polymerase sigma-70 like RAM_15210 IPR014284 RNA polymerase sigma-70 like domain RAM_15215 IPR036909 Cytochrome c-like domain superfamily RAM_15215 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RAM_15215 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RAM_15215 IPR009056 Cytochrome c-like domain RAM_15215 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RAM_15215 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RAM_15220 IPR036884 [2Fe-2S]-binding domain superfamily RAM_15220 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_15220 IPR002888 [2Fe-2S]-binding RAM_15220 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_15220 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_15225 IPR025736 PucR C-terminal helix-turn-helix domain RAM_15225 IPR041522 CdaR, GGDEF-like domain RAM_15225 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_15240 IPR009057 Homeobox-like domain superfamily RAM_15240 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_15240 IPR013570 Transcription regulator YsiA, C-terminal RAM_15240 IPR001647 DNA-binding HTH domain, TetR-type RAM_15245 IPR036291 NAD(P)-binding domain superfamily RAM_15245 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_15250 IPR023210 NADP-dependent oxidoreductase domain RAM_15250 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_15255 IPR003593 AAA+ ATPase domain RAM_15255 IPR019489 Clp ATPase, C-terminal RAM_15255 IPR003959 ATPase, AAA-type, core RAM_15255 IPR018368 ClpA/B, conserved site 1 RAM_15255 IPR036628 Clp, N-terminal domain superfamily RAM_15255 IPR004176 Clp, N-terminal RAM_15255 IPR001270 ClpA/B family RAM_15255 IPR028299 ClpA/B, conserved site 2 RAM_15255 IPR041546 ClpA/ClpB, AAA lid domain RAM_15255 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_15265 IPR032466 Metal-dependent hydrolase RAM_15265 IPR001365 Adenosine/AMP deaminase domain RAM_15265 IPR006650 Adenosine/AMP deaminase active site RAM_15265 IPR006330 Adenosine/adenine deaminase RAM_15275 IPR002121 HRDC domain RAM_15275 IPR011545 DEAD/DEAH box helicase domain RAM_15275 IPR004589 DNA helicase, ATP-dependent, RecQ type RAM_15275 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_15275 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial RAM_15275 IPR018982 RQC domain RAM_15275 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RAM_15275 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_15275 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_15275 IPR010997 HRDC-like superfamily RAM_15275 IPR001650 Helicase, C-terminal RAM_15285 IPR036291 NAD(P)-binding domain superfamily RAM_15285 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_15285 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_15305 IPR000551 MerR-type HTH domain RAM_15305 IPR010211 Redox-sensitive transcriptional activator SoxR RAM_15305 IPR015358 Transcription regulator MerR, DNA binding RAM_15305 IPR009061 Putative DNA-binding domain superfamily RAM_15320 IPR003660 HAMP domain RAM_15320 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_15320 IPR005467 Histidine kinase domain RAM_15320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_15320 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_15320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_15320 IPR003594 Histidine kinase/HSP90-like ATPase RAM_15325 IPR039420 Transcriptional regulatory protein WalR-like RAM_15325 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_15325 IPR001789 Signal transduction response regulator, receiver domain RAM_15325 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_15325 IPR011006 CheY-like superfamily RAM_15335 IPR015424 Pyridoxal phosphate-dependent transferase RAM_15335 IPR021115 Pyridoxal-phosphate binding site RAM_15335 IPR002129 Pyridoxal phosphate-dependent decarboxylase RAM_15335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_15345 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_15345 IPR000399 TPP-binding enzyme, conserved site RAM_15345 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_15345 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_15345 IPR029061 Thiamin diphosphate-binding fold RAM_15345 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_15355 IPR000073 Alpha/beta hydrolase fold-1 RAM_15355 IPR000639 Epoxide hydrolase-like RAM_15355 IPR029058 Alpha/Beta hydrolase fold RAM_15360 IPR012093 Pirin RAM_15360 IPR003829 Pirin, N-terminal domain RAM_15360 IPR011051 RmlC-like cupin domain superfamily RAM_15360 IPR014710 RmlC-like jelly roll fold RAM_15360 IPR008778 Pirin, C-terminal domain RAM_15370 IPR011344 Single-stranded DNA-binding protein RAM_15370 IPR000424 Primosome PriB/single-strand DNA-binding RAM_15370 IPR012340 Nucleic acid-binding, OB-fold RAM_15385 IPR004378 F420H(2)-dependent quinone reductase RAM_15385 IPR012349 FMN-binding split barrel RAM_15390 IPR001460 Penicillin-binding protein, transpeptidase RAM_15390 IPR012338 Beta-lactamase/transpeptidase-like RAM_15390 IPR036950 Penicillin binding protein transglycosylase domain RAM_15390 IPR001264 Glycosyl transferase, family 51 RAM_15390 IPR023346 Lysozyme-like domain superfamily RAM_15400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_15400 IPR017871 ABC transporter, conserved site RAM_15400 IPR003593 AAA+ ATPase domain RAM_15400 IPR003439 ABC transporter-like RAM_15405 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_15405 IPR003593 AAA+ ATPase domain RAM_15405 IPR025302 Domain of unknown function DUF4162 RAM_15405 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_15405 IPR017871 ABC transporter, conserved site RAM_15405 IPR003439 ABC transporter-like RAM_15420 IPR020843 Polyketide synthase, enoylreductase domain RAM_15420 IPR036291 NAD(P)-binding domain superfamily RAM_15420 IPR011032 GroES-like superfamily RAM_15420 IPR013149 Alcohol dehydrogenase, C-terminal RAM_15420 IPR013154 Alcohol dehydrogenase, N-terminal RAM_15430 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RAM_15430 IPR028973 PhnB-like RAM_15450 IPR003018 GAF domain RAM_15450 IPR029016 GAF-like domain superfamily RAM_15450 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_15450 IPR003594 Histidine kinase/HSP90-like ATPase RAM_15450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_15450 IPR005467 Histidine kinase domain RAM_15455 IPR002018 Carboxylesterase, type B RAM_15455 IPR019826 Carboxylesterase type B, active site RAM_15455 IPR029058 Alpha/Beta hydrolase fold RAM_15460 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RAM_15460 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RAM_15460 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RAM_15460 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RAM_15465 IPR005107 CO dehydrogenase flavoprotein, C-terminal RAM_15465 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_15465 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily RAM_15465 IPR016166 FAD-binding domain, PCMH-type RAM_15465 IPR036318 FAD-binding, type PCMH-like superfamily RAM_15465 IPR002346 Molybdopterin dehydrogenase, FAD-binding RAM_15470 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RAM_15470 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_15470 IPR036884 [2Fe-2S]-binding domain superfamily RAM_15470 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_15470 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_15470 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_15470 IPR012675 Beta-grasp domain superfamily RAM_15470 IPR002888 [2Fe-2S]-binding RAM_15490 IPR015590 Aldehyde dehydrogenase domain RAM_15490 IPR016161 Aldehyde/histidinol dehydrogenase RAM_15490 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_15490 IPR016160 Aldehyde dehydrogenase, cysteine active site RAM_15490 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_15490 IPR010061 Methylmalonate-semialdehyde dehydrogenase RAM_15495 IPR011663 UbiC transcription regulator-associated RAM_15495 IPR036390 Winged helix DNA-binding domain superfamily RAM_15495 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_15495 IPR000524 Transcription regulator HTH, GntR RAM_15495 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RAM_15505 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_15505 IPR027399 Alcohol dehydrogenase GroES-associated RAM_15505 IPR011032 GroES-like superfamily RAM_15505 IPR013149 Alcohol dehydrogenase, C-terminal RAM_15505 IPR013154 Alcohol dehydrogenase, N-terminal RAM_15505 IPR036291 NAD(P)-binding domain superfamily RAM_15520 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_15520 IPR003594 Histidine kinase/HSP90-like ATPase RAM_15525 IPR002645 STAS domain RAM_15525 IPR036513 STAS domain superfamily RAM_15530 IPR002645 STAS domain RAM_15530 IPR012292 Globin/Protoglobin RAM_15530 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain RAM_15530 IPR036513 STAS domain superfamily RAM_15550 IPR008978 HSP20-like chaperone RAM_15550 IPR002068 Alpha crystallin/Hsp20 domain RAM_15550 IPR031107 Small heat shock protein HSP20 RAM_15555 IPR036291 NAD(P)-binding domain superfamily RAM_15555 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_15555 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_15560 IPR023616 Cytochrome c oxidase-like, subunit I domain RAM_15560 IPR036927 Cytochrome c oxidase-like, subunit I superfamily RAM_15560 IPR000883 Cytochrome c oxidase subunit I RAM_15560 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RAM_15560 IPR014241 Cytochrome c oxidase, subunit I bacterial type RAM_15565 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RAM_15565 IPR014756 Immunoglobulin E-set RAM_15565 IPR004193 Glycoside hydrolase, family 13, N-terminal RAM_15565 IPR013780 Glycosyl hydrolase, all-beta RAM_15565 IPR017853 Glycoside hydrolase superfamily RAM_15565 IPR011837 Glycogen debranching enzyme, GlgX type RAM_15565 IPR013783 Immunoglobulin-like fold RAM_15570 IPR012347 Ferritin-like RAM_15570 IPR009078 Ferritin-like superfamily RAM_15570 IPR007760 Manganese catalase RAM_15570 IPR027407 Manganese catalase, C-terminal RAM_15570 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain RAM_15580 IPR008030 NmrA-like domain RAM_15580 IPR036291 NAD(P)-binding domain superfamily RAM_15585 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_15585 IPR036390 Winged helix DNA-binding domain superfamily RAM_15585 IPR002577 Helix-turn-helix, HxlR type RAM_15615 IPR000843 LacI-type HTH domain RAM_15615 IPR028082 Periplasmic binding protein-like I RAM_15615 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_15625 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like RAM_15625 IPR035906 MetI-like superfamily RAM_15625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_15630 IPR035906 MetI-like superfamily RAM_15630 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_15645 IPR009057 Homeobox-like domain superfamily RAM_15645 IPR001647 DNA-binding HTH domain, TetR-type RAM_15645 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_15650 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_15650 IPR023210 NADP-dependent oxidoreductase domain RAM_15655 IPR018060 DNA binding HTH domain, AraC-type RAM_15655 IPR018062 HTH domain AraC-type, conserved site RAM_15655 IPR029062 Class I glutamine amidotransferase-like RAM_15655 IPR002818 DJ-1/PfpI RAM_15655 IPR009057 Homeobox-like domain superfamily RAM_15660 IPR023210 NADP-dependent oxidoreductase domain RAM_15660 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_15670 IPR036390 Winged helix DNA-binding domain superfamily RAM_15670 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_15670 IPR026881 WYL domain RAM_15670 IPR013196 Helix-turn-helix, type 11 RAM_15670 IPR028349 Protein PafC RAM_15670 IPR001034 DeoR-type HTH domain RAM_15680 IPR000031 PurE domain RAM_15680 IPR039476 Pyridinium-3,5-biscarboxylic acid mononucleotide synthase RAM_15680 IPR035893 PurE domain superfamily RAM_15685 IPR018657 LarA-like, N-terminal RAM_15690 IPR006680 Amidohydrolase-related RAM_15690 IPR032466 Metal-dependent hydrolase RAM_15695 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily RAM_15695 IPR011234 Fumarylacetoacetase-like, C-terminal RAM_15700 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_15700 IPR029065 Enolase C-terminal domain-like RAM_15700 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_15700 IPR029017 Enolase-like, N-terminal RAM_15700 IPR034610 L-fuconate dehydratase RAM_15700 IPR036849 Enolase-like, C-terminal domain superfamily RAM_15705 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_15705 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_15705 IPR036291 NAD(P)-binding domain superfamily RAM_15715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_15715 IPR015861 ABC transporter, ribose import, RbsA RAM_15715 IPR017871 ABC transporter, conserved site RAM_15715 IPR003439 ABC transporter-like RAM_15715 IPR003593 AAA+ ATPase domain RAM_15720 IPR001851 ABC transporter, permease RAM_15725 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_15725 IPR023210 NADP-dependent oxidoreductase domain RAM_15750 IPR000843 LacI-type HTH domain RAM_15750 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_15750 IPR028082 Periplasmic binding protein-like I RAM_15755 IPR028082 Periplasmic binding protein-like I RAM_15755 IPR000843 LacI-type HTH domain RAM_15755 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_15760 IPR042099 AMP-dependent synthetase-like superfamily RAM_15760 IPR025110 AMP-binding enzyme, C-terminal domain RAM_15760 IPR020845 AMP-binding, conserved site RAM_15760 IPR000873 AMP-dependent synthetase/ligase RAM_15765 IPR000073 Alpha/beta hydrolase fold-1 RAM_15765 IPR029058 Alpha/Beta hydrolase fold RAM_15770 IPR024412 Lsr2 RAM_15770 IPR042261 Lsr2, dimerization domain RAM_15770 IPR042254 Lsr2, DNA binding domain RAM_15775 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_15775 IPR020845 AMP-binding, conserved site RAM_15775 IPR000873 AMP-dependent synthetase/ligase RAM_15775 IPR042099 AMP-dependent synthetase-like superfamily RAM_15775 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_15775 IPR025110 AMP-binding enzyme, C-terminal domain RAM_15775 IPR036736 ACP-like superfamily RAM_15775 IPR010071 Amino acid adenylation domain RAM_15775 IPR001242 Condensation domain RAM_15775 IPR010060 Non-ribosomal peptide synthase RAM_15775 IPR006162 Phosphopantetheine attachment site RAM_15775 IPR009081 Phosphopantetheine binding ACP domain RAM_15780 IPR005153 MbtH-like domain RAM_15780 IPR038020 MbtH-like domain superfamily RAM_15780 IPR037407 MbtH-like protein RAM_15785 IPR001466 Beta-lactamase-related RAM_15785 IPR012338 Beta-lactamase/transpeptidase-like RAM_15785 IPR001586 Beta-lactamase, class-C active site RAM_15790 IPR010071 Amino acid adenylation domain RAM_15790 IPR036736 ACP-like superfamily RAM_15790 IPR025110 AMP-binding enzyme, C-terminal domain RAM_15790 IPR020845 AMP-binding, conserved site RAM_15790 IPR000873 AMP-dependent synthetase/ligase RAM_15790 IPR042099 AMP-dependent synthetase-like superfamily RAM_15790 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_15790 IPR001242 Condensation domain RAM_15790 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_15790 IPR009081 Phosphopantetheine binding ACP domain RAM_15790 IPR006162 Phosphopantetheine attachment site RAM_15790 IPR010060 Non-ribosomal peptide synthase RAM_15800 IPR002397 Cytochrome P450, B-class RAM_15800 IPR001128 Cytochrome P450 RAM_15800 IPR017972 Cytochrome P450, conserved site RAM_15800 IPR036396 Cytochrome P450 superfamily RAM_15825 IPR020843 Polyketide synthase, enoylreductase domain RAM_15825 IPR036291 NAD(P)-binding domain superfamily RAM_15825 IPR011032 GroES-like superfamily RAM_15825 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 RAM_15825 IPR013154 Alcohol dehydrogenase, N-terminal RAM_15825 IPR013149 Alcohol dehydrogenase, C-terminal RAM_15825 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_15835 IPR004302 Cellulose/chitin-binding protein, N-terminal RAM_15835 IPR041029 N-acetylglucosamine binding protein A domain 2 RAM_15835 IPR014756 Immunoglobulin E-set RAM_15840 IPR001279 Metallo-beta-lactamase RAM_15840 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_15865 IPR005031 Coenzyme Q-binding protein COQ10, START domain RAM_15865 IPR023393 START-like domain superfamily RAM_15895 IPR036291 NAD(P)-binding domain superfamily RAM_15895 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_15895 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_15900 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_15900 IPR036291 NAD(P)-binding domain superfamily RAM_15900 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_15910 IPR029045 ClpP/crotonase-like domain superfamily RAM_15910 IPR001753 Enoyl-CoA hydratase/isomerase RAM_15910 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_15915 IPR013783 Immunoglobulin-like fold RAM_15915 IPR008964 Invasin/intimin cell-adhesion fragments RAM_15915 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_15915 IPR006101 Glycoside hydrolase, family 2 RAM_15915 IPR017853 Glycoside hydrolase superfamily RAM_15915 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_15915 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_15915 IPR040605 Glycoside hydrolase family 2, domain 5 RAM_15915 IPR006103 Glycoside hydrolase family 2, catalytic domain RAM_15915 IPR008979 Galactose-binding-like domain superfamily RAM_15915 IPR023232 Glycoside hydrolase, family 2, active site RAM_15915 IPR032311 Domain of unknown function DUF4982 RAM_15925 IPR020845 AMP-binding, conserved site RAM_15925 IPR042099 AMP-dependent synthetase-like superfamily RAM_15925 IPR000873 AMP-dependent synthetase/ligase RAM_15925 IPR025110 AMP-binding enzyme, C-terminal domain RAM_15925 IPR020459 AMP-binding RAM_15930 IPR020845 AMP-binding, conserved site RAM_15930 IPR042099 AMP-dependent synthetase-like superfamily RAM_15930 IPR025110 AMP-binding enzyme, C-terminal domain RAM_15930 IPR000873 AMP-dependent synthetase/ligase RAM_15935 IPR001559 Phosphotriesterase RAM_15935 IPR032466 Metal-dependent hydrolase RAM_15935 IPR017947 Aryldialkylphosphatase, zinc-binding site RAM_15940 IPR041612 YfiR, C-terminal RAM_15940 IPR001647 DNA-binding HTH domain, TetR-type RAM_15940 IPR009057 Homeobox-like domain superfamily RAM_15940 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_15945 IPR029058 Alpha/Beta hydrolase fold RAM_15945 IPR000073 Alpha/beta hydrolase fold-1 RAM_15945 IPR000639 Epoxide hydrolase-like RAM_15955 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_15955 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_15955 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_15955 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_15955 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_15955 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_15960 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_15960 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_15960 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_15960 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_15960 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_15960 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_15965 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_15965 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_15965 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_15965 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_15965 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_15965 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_15965 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_15980 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_15980 IPR036291 NAD(P)-binding domain superfamily RAM_15980 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_15985 IPR034593 Mandelate racemase-like RAM_15985 IPR029017 Enolase-like, N-terminal RAM_15985 IPR036849 Enolase-like, C-terminal domain superfamily RAM_15985 IPR029065 Enolase C-terminal domain-like RAM_15985 IPR023592 D-galactonate dehydratase RAM_15985 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_15985 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_15985 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site RAM_16000 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_16000 IPR035906 MetI-like superfamily RAM_16005 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase RAM_16005 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein RAM_16005 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily RAM_16010 IPR011009 Protein kinase-like domain superfamily RAM_16010 IPR000719 Protein kinase domain RAM_16010 IPR008271 Serine/threonine-protein kinase, active site RAM_16030 IPR011006 CheY-like superfamily RAM_16030 IPR000792 Transcription regulator LuxR, C-terminal RAM_16030 IPR016032 Signal transduction response regulator, C-terminal effector RAM_16030 IPR001789 Signal transduction response regulator, receiver domain RAM_16050 IPR036259 MFS transporter superfamily RAM_16050 IPR020846 Major facilitator superfamily domain RAM_16050 IPR011701 Major facilitator superfamily RAM_16060 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_16060 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_16060 IPR003594 Histidine kinase/HSP90-like ATPase RAM_16060 IPR005467 Histidine kinase domain RAM_16060 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_16060 IPR031967 PhoR, single Cache-like domain RAM_16060 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_16060 IPR013767 PAS fold RAM_16060 IPR035965 PAS domain superfamily RAM_16060 IPR000014 PAS domain RAM_16065 IPR011006 CheY-like superfamily RAM_16065 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_16065 IPR001789 Signal transduction response regulator, receiver domain RAM_16065 IPR039420 Transcriptional regulatory protein WalR-like RAM_16065 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_16080 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_16080 IPR017871 ABC transporter, conserved site RAM_16080 IPR003593 AAA+ ATPase domain RAM_16080 IPR003439 ABC transporter-like RAM_16100 IPR001647 DNA-binding HTH domain, TetR-type RAM_16100 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_16100 IPR013573 Transcription regulator YcdC, C-terminal RAM_16100 IPR019915 Transcription regulator, pyrimidine utilisation, RutR RAM_16100 IPR009057 Homeobox-like domain superfamily RAM_16125 IPR001357 BRCT domain RAM_16125 IPR036420 BRCT domain superfamily RAM_16125 IPR041663 DisA/LigA, helix-hairpin-helix motif RAM_16125 IPR018239 NAD-dependent DNA ligase, active site RAM_16125 IPR013839 NAD-dependent DNA ligase, adenylation RAM_16125 IPR013840 NAD-dependent DNA ligase, N-terminal RAM_16125 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RAM_16125 IPR012340 Nucleic acid-binding, OB-fold RAM_16125 IPR004150 NAD-dependent DNA ligase, OB-fold RAM_16125 IPR010994 RuvA domain 2-like RAM_16125 IPR001679 NAD-dependent DNA ligase RAM_16130 IPR011251 Luciferase-like domain RAM_16130 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related RAM_16130 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase RAM_16130 IPR036661 Luciferase-like domain superfamily RAM_16140 IPR013325 RNA polymerase sigma factor, region 2 RAM_16140 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_16140 IPR007627 RNA polymerase sigma-70 region 2 RAM_16140 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_16140 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_16140 IPR014284 RNA polymerase sigma-70 like domain RAM_16140 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_16140 IPR039425 RNA polymerase sigma-70 like RAM_16160 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_16160 IPR016292 Epoxide hydrolase RAM_16160 IPR029058 Alpha/Beta hydrolase fold RAM_16160 IPR000639 Epoxide hydrolase-like RAM_16160 IPR010497 Epoxide hydrolase, N-terminal RAM_16170 IPR020846 Major facilitator superfamily domain RAM_16170 IPR036259 MFS transporter superfamily RAM_16170 IPR011701 Major facilitator superfamily RAM_16185 IPR014305 RNA polymerase sigma-G type, actinobacteria RAM_16185 IPR014284 RNA polymerase sigma-70 like domain RAM_16185 IPR039425 RNA polymerase sigma-70 like RAM_16185 IPR032710 NTF2-like domain superfamily RAM_16185 IPR007627 RNA polymerase sigma-70 region 2 RAM_16185 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_16185 IPR037401 SnoaL-like domain RAM_16185 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_16185 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_16185 IPR013325 RNA polymerase sigma factor, region 2 RAM_16185 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_16205 IPR005496 Integral membrane protein TerC RAM_16205 IPR022369 Integral membrane protein TerC, riboswitch-linked RAM_16215 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RAM_16215 IPR013780 Glycosyl hydrolase, all-beta RAM_16215 IPR017853 Glycoside hydrolase superfamily RAM_16225 IPR029009 Allosteric substrate binding domain superfamily RAM_16225 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RAM_16225 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RAM_16225 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RAM_16225 IPR006236 D-3-phosphoglycerate dehydrogenase RAM_16225 IPR036291 NAD(P)-binding domain superfamily RAM_16225 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RAM_16225 IPR002912 ACT domain RAM_16235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_16235 IPR035906 MetI-like superfamily RAM_16250 IPR036390 Winged helix DNA-binding domain superfamily RAM_16250 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_16250 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RAM_16250 IPR037171 NagB/RpiA transferase-like RAM_16250 IPR014036 DeoR C-terminal sensor domain RAM_16250 IPR001034 DeoR-type HTH domain RAM_16255 IPR038232 PknH-like extracellular domain superfamily RAM_16255 IPR008271 Serine/threonine-protein kinase, active site RAM_16255 IPR000719 Protein kinase domain RAM_16255 IPR026954 PknH-like extracellular domain RAM_16255 IPR011009 Protein kinase-like domain superfamily RAM_16255 IPR017441 Protein kinase, ATP binding site RAM_16260 IPR028082 Periplasmic binding protein-like I RAM_16260 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_16260 IPR000843 LacI-type HTH domain RAM_16265 IPR011009 Protein kinase-like domain superfamily RAM_16265 IPR005543 PASTA domain RAM_16265 IPR008271 Serine/threonine-protein kinase, active site RAM_16265 IPR017441 Protein kinase, ATP binding site RAM_16265 IPR000719 Protein kinase domain RAM_16270 IPR017441 Protein kinase, ATP binding site RAM_16270 IPR000719 Protein kinase domain RAM_16270 IPR011009 Protein kinase-like domain superfamily RAM_16270 IPR005543 PASTA domain RAM_16270 IPR008271 Serine/threonine-protein kinase, active site RAM_16285 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_16285 IPR014603 Formate dehydrogenase iron-sulphur subunit RAM_16285 IPR015246 Formate dehydrogenase, transmembrane RAM_16285 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria RAM_16285 IPR038384 Formate dehydrogenase, C-terminal domain superfamily RAM_16285 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_16290 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_16290 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_16290 IPR006443 Formate dehydrogenase-N, alpha subunit RAM_16290 IPR006657 Molybdopterin dinucleotide-binding domain RAM_16290 IPR006656 Molybdopterin oxidoreductase RAM_16290 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RAM_16290 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RAM_16290 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RAM_16295 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RAM_16295 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RAM_16295 IPR006656 Molybdopterin oxidoreductase RAM_16295 IPR006657 Molybdopterin dinucleotide-binding domain RAM_16295 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain RAM_16295 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_16295 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RAM_16300 IPR020846 Major facilitator superfamily domain RAM_16300 IPR005828 Major facilitator, sugar transporter-like RAM_16300 IPR036259 MFS transporter superfamily RAM_16315 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_16315 IPR007061 Protein of unknown function DUF664 RAM_16320 IPR016461 O-methyltransferase COMT-type RAM_16320 IPR036390 Winged helix DNA-binding domain superfamily RAM_16320 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_16320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_16320 IPR001077 O-methyltransferase domain RAM_16325 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_16325 IPR001387 Cro/C1-type helix-turn-helix domain RAM_16340 IPR012338 Beta-lactamase/transpeptidase-like RAM_16340 IPR001466 Beta-lactamase-related RAM_16345 IPR023214 HAD superfamily RAM_16345 IPR023299 P-type ATPase, cytoplasmic domain N RAM_16345 IPR018303 P-type ATPase, phosphorylation site RAM_16345 IPR023298 P-type ATPase, transmembrane domain superfamily RAM_16345 IPR008250 P-type ATPase, A domain superfamily RAM_16345 IPR036412 HAD-like superfamily RAM_16345 IPR001757 P-type ATPase RAM_16345 IPR006068 Cation-transporting P-type ATPase, C-terminal RAM_16355 IPR011251 Luciferase-like domain RAM_16355 IPR036661 Luciferase-like domain superfamily RAM_16355 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase RAM_16355 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related RAM_16360 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain RAM_16360 IPR005119 LysR, substrate-binding RAM_16360 IPR036390 Winged helix DNA-binding domain superfamily RAM_16360 IPR000847 Transcription regulator HTH, LysR RAM_16360 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_16370 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria RAM_16370 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RAM_16370 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RAM_16370 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RAM_16370 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_16370 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RAM_16370 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily RAM_16375 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RAM_16375 IPR009051 Alpha-helical ferredoxin RAM_16375 IPR012675 Beta-grasp domain superfamily RAM_16375 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_16375 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_16375 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_16375 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_16375 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_16375 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RAM_16410 IPR008475 Bacterial phospholipase C, C-terminal domain RAM_16410 IPR007312 Phosphoesterase RAM_16410 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RAM_16410 IPR017767 Bacterial phospholipase C, phosphocholine-specific RAM_16410 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_16410 IPR017850 Alkaline-phosphatase-like, core domain superfamily RAM_16420 IPR036390 Winged helix DNA-binding domain superfamily RAM_16420 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_16420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_16420 IPR001077 O-methyltransferase domain RAM_16420 IPR016461 O-methyltransferase COMT-type RAM_16435 IPR006076 FAD dependent oxidoreductase RAM_16435 IPR012727 Glycine oxidase ThiO RAM_16435 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_16445 IPR007419 BFD-like [2Fe-2S]-binding domain RAM_16445 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily RAM_16445 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_16445 IPR023753 FAD/NAD(P)-binding domain RAM_16445 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B RAM_16450 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RAM_16450 IPR013785 Aldolase-type TIM barrel RAM_16450 IPR002220 DapA-like RAM_16450 IPR020624 Schiff base-forming aldolase, conserved site RAM_16450 IPR020625 Schiff base-forming aldolase, active site RAM_16455 IPR008794 Proline racemase family RAM_16480 IPR034686 Terpene cyclase-like 2 RAM_16480 IPR008949 Isoprenoid synthase domain superfamily RAM_16485 IPR041698 Methyltransferase domain 25 RAM_16485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_16490 IPR035906 MetI-like superfamily RAM_16490 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_16495 IPR035906 MetI-like superfamily RAM_16495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_16545 IPR002549 Transmembrane protein TqsA-like RAM_16550 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal RAM_16550 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RAM_16550 IPR006710 Glycoside hydrolase, family 43 RAM_16560 IPR033649 LigD polymerase domain, MtLigD-type RAM_16560 IPR012340 Nucleic acid-binding, OB-fold RAM_16560 IPR012310 DNA ligase, ATP-dependent, central RAM_16560 IPR014145 DNA ligase D, polymerase domain RAM_16560 IPR014144 DNA ligase D, 3'-phosphoesterase domain RAM_16560 IPR014146 DNA ligase D, ligase domain RAM_16560 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_16565 IPR001647 DNA-binding HTH domain, TetR-type RAM_16565 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_16565 IPR011075 Tetracyclin repressor-like, C-terminal domain RAM_16565 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_16565 IPR009057 Homeobox-like domain superfamily RAM_16575 IPR023576 UbiE/COQ5 methyltransferase, conserved site RAM_16575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_16575 IPR004033 UbiE/COQ5 methyltransferase RAM_16580 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RAM_16580 IPR036412 HAD-like superfamily RAM_16580 IPR006439 HAD hydrolase, subfamily IA RAM_16580 IPR041492 Haloacid dehalogenase-like hydrolase RAM_16580 IPR023214 HAD superfamily RAM_16620 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_16620 IPR026578 L-carnitine dehydrogenase RAM_16620 IPR036291 NAD(P)-binding domain superfamily RAM_16620 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_16620 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_16620 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_16625 IPR005914 Acetoacetyl-CoA synthase RAM_16625 IPR020845 AMP-binding, conserved site RAM_16625 IPR042099 AMP-dependent synthetase-like superfamily RAM_16625 IPR025110 AMP-binding enzyme, C-terminal domain RAM_16625 IPR000873 AMP-dependent synthetase/ligase RAM_16630 IPR001753 Enoyl-CoA hydratase/isomerase RAM_16630 IPR029045 ClpP/crotonase-like domain superfamily RAM_16630 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_16630 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_16635 IPR025110 AMP-binding enzyme, C-terminal domain RAM_16635 IPR020845 AMP-binding, conserved site RAM_16635 IPR000873 AMP-dependent synthetase/ligase RAM_16635 IPR042099 AMP-dependent synthetase-like superfamily RAM_16640 IPR036291 NAD(P)-binding domain superfamily RAM_16640 IPR011032 GroES-like superfamily RAM_16640 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_16640 IPR013154 Alcohol dehydrogenase, N-terminal RAM_16640 IPR013149 Alcohol dehydrogenase, C-terminal RAM_16645 IPR015590 Aldehyde dehydrogenase domain RAM_16645 IPR011264 Betaine aldehyde dehydrogenase RAM_16645 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_16645 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_16645 IPR016160 Aldehyde dehydrogenase, cysteine active site RAM_16645 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_16645 IPR016161 Aldehyde/histidinol dehydrogenase RAM_16665 IPR009057 Homeobox-like domain superfamily RAM_16665 IPR001647 DNA-binding HTH domain, TetR-type RAM_16665 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_16665 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) RAM_16705 IPR020845 AMP-binding, conserved site RAM_16705 IPR020459 AMP-binding RAM_16705 IPR010071 Amino acid adenylation domain RAM_16705 IPR036736 ACP-like superfamily RAM_16705 IPR006162 Phosphopantetheine attachment site RAM_16705 IPR000873 AMP-dependent synthetase/ligase RAM_16705 IPR042099 AMP-dependent synthetase-like superfamily RAM_16705 IPR009081 Phosphopantetheine binding ACP domain RAM_16705 IPR025110 AMP-binding enzyme, C-terminal domain RAM_16710 IPR018366 Carbohydrate-binding type-2, conserved site RAM_16710 IPR001919 Carbohydrate-binding type-2 domain RAM_16710 IPR001547 Glycoside hydrolase, family 5 RAM_16710 IPR018087 Glycoside hydrolase, family 5, conserved site RAM_16710 IPR017853 Glycoside hydrolase superfamily RAM_16710 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_16710 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_16715 IPR006584 Cellulose binding, type IV RAM_16715 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RAM_16715 IPR005084 Carbohydrate binding module family 6 RAM_16715 IPR006710 Glycoside hydrolase, family 43 RAM_16715 IPR008979 Galactose-binding-like domain superfamily RAM_16720 IPR000772 Ricin B, lectin domain RAM_16720 IPR017853 Glycoside hydrolase superfamily RAM_16720 IPR031158 Glycosyl hydrolases family 10, active site RAM_16720 IPR001000 Glycoside hydrolase family 10 domain RAM_16720 IPR035992 Ricin B-like lectins RAM_16725 IPR001524 Glycoside hydrolase, family 6, conserved site RAM_16725 IPR016288 1, 4-beta cellobiohydrolase RAM_16725 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_16725 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_16725 IPR036434 1, 4-beta cellobiohydrolase superfamily RAM_16725 IPR018366 Carbohydrate-binding type-2, conserved site RAM_16725 IPR001919 Carbohydrate-binding type-2 domain RAM_16735 IPR000772 Ricin B, lectin domain RAM_16735 IPR035992 Ricin B-like lectins RAM_16750 IPR005193 Glycoside hydrolase, family 62, arabinosidase RAM_16750 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RAM_16750 IPR035992 Ricin B-like lectins RAM_16750 IPR000772 Ricin B, lectin domain RAM_16770 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_16770 IPR000843 LacI-type HTH domain RAM_16770 IPR028082 Periplasmic binding protein-like I RAM_16785 IPR037473 Rubber oxygenase Lcp-like RAM_16785 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_16785 IPR018713 Domain of unknown function DUF2236 RAM_16790 IPR009057 Homeobox-like domain superfamily RAM_16790 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_16790 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_16790 IPR023769 Nucleoid occlusion factor SlmA RAM_16790 IPR001647 DNA-binding HTH domain, TetR-type RAM_16795 IPR039425 RNA polymerase sigma-70 like RAM_16795 IPR014284 RNA polymerase sigma-70 like domain RAM_16795 IPR007627 RNA polymerase sigma-70 region 2 RAM_16795 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_16795 IPR013325 RNA polymerase sigma factor, region 2 RAM_16795 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_16795 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_16810 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase RAM_16810 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_16810 IPR036291 NAD(P)-binding domain superfamily RAM_16810 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_16815 IPR029061 Thiamin diphosphate-binding fold RAM_16815 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_16815 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_16815 IPR000399 TPP-binding enzyme, conserved site RAM_16815 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_16815 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_16825 IPR010640 Low temperature requirement A RAM_16830 IPR004942 Roadblock/LAMTOR2 domain RAM_16840 IPR005330 MHYT domain RAM_16840 IPR029787 Nucleotide cyclase RAM_16840 IPR000160 GGDEF domain RAM_16840 IPR035919 EAL domain superfamily RAM_16840 IPR001633 EAL domain RAM_16850 IPR000524 Transcription regulator HTH, GntR RAM_16850 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RAM_16850 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_16850 IPR036390 Winged helix DNA-binding domain superfamily RAM_16850 IPR011663 UbiC transcription regulator-associated RAM_16855 IPR011658 PA14 domain RAM_16855 IPR015883 Glycoside hydrolase family 20, catalytic domain RAM_16855 IPR029018 Beta-hexosaminidase-like, domain 2 RAM_16855 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal RAM_16855 IPR017853 Glycoside hydrolase superfamily RAM_16855 IPR025705 Beta-hexosaminidase RAM_16855 IPR037524 PA14/GLEYA domain RAM_16860 IPR035906 MetI-like superfamily RAM_16860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_16865 IPR035906 MetI-like superfamily RAM_16865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_16880 IPR001721 Threonine dehydratase, ACT-like domain RAM_16880 IPR011820 L-threonine dehydratase biosynthetic IlvA RAM_16880 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_16880 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_16880 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RAM_16890 IPR036196 Phosphotyrosine protein phosphatase I superfamily RAM_16890 IPR017867 Protein-tyrosine phosphatase, low molecular weight RAM_16890 IPR023485 Phosphotyrosine protein phosphatase I RAM_16895 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_16895 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_16895 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_16895 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_16895 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_16895 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_16895 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_16900 IPR000792 Transcription regulator LuxR, C-terminal RAM_16900 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_16900 IPR016032 Signal transduction response regulator, C-terminal effector RAM_16900 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_16900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_16915 IPR029787 Nucleotide cyclase RAM_16915 IPR011006 CheY-like superfamily RAM_16915 IPR000160 GGDEF domain RAM_16915 IPR001789 Signal transduction response regulator, receiver domain RAM_16920 IPR000843 LacI-type HTH domain RAM_16920 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_16920 IPR028082 Periplasmic binding protein-like I RAM_16955 IPR001647 DNA-binding HTH domain, TetR-type RAM_16955 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) RAM_16955 IPR009057 Homeobox-like domain superfamily RAM_16955 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_16960 IPR028301 Serine proteases, V8 family, histidine active site RAM_16960 IPR000126 Serine proteases, V8 family, serine active site RAM_16960 IPR008256 Peptidase S1B RAM_16960 IPR009003 Peptidase S1, PA clan RAM_16960 IPR001254 Serine proteases, trypsin domain RAM_16965 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_16965 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_16965 IPR001647 DNA-binding HTH domain, TetR-type RAM_16965 IPR009057 Homeobox-like domain superfamily RAM_16975 IPR039425 RNA polymerase sigma-70 like RAM_16975 IPR014284 RNA polymerase sigma-70 like domain RAM_16975 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_16975 IPR007627 RNA polymerase sigma-70 region 2 RAM_16975 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_16975 IPR013325 RNA polymerase sigma factor, region 2 RAM_16975 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_16975 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_16985 IPR036144 RibA-like superfamily RAM_16985 IPR032677 GTP cyclohydrolase II RAM_16985 IPR000926 GTP cyclohydrolase II, RibA RAM_17010 IPR001647 DNA-binding HTH domain, TetR-type RAM_17010 IPR011075 Tetracyclin repressor-like, C-terminal domain RAM_17010 IPR009057 Homeobox-like domain superfamily RAM_17010 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_17010 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_17020 IPR000073 Alpha/beta hydrolase fold-1 RAM_17020 IPR029058 Alpha/Beta hydrolase fold RAM_17020 IPR000639 Epoxide hydrolase-like RAM_17020 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal RAM_17035 IPR036661 Luciferase-like domain superfamily RAM_17035 IPR011251 Luciferase-like domain RAM_17050 IPR007685 RelA/SpoT RAM_17055 IPR004111 Tetracycline repressor TetR, C-terminal RAM_17055 IPR001647 DNA-binding HTH domain, TetR-type RAM_17055 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_17055 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_17055 IPR003012 Tetracycline transcriptional regulator, TetR RAM_17055 IPR009057 Homeobox-like domain superfamily RAM_17060 IPR001128 Cytochrome P450 RAM_17060 IPR002397 Cytochrome P450, B-class RAM_17060 IPR036396 Cytochrome P450 superfamily RAM_17060 IPR017972 Cytochrome P450, conserved site RAM_17075 IPR001123 Amino acid exporter protein, LeuE-type RAM_17075 IPR004778 Homoserine/Threonine efflux protein RAM_17080 IPR036869 Chaperone J-domain superfamily RAM_17080 IPR012724 Chaperone DnaJ RAM_17080 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily RAM_17080 IPR018253 DnaJ domain, conserved site RAM_17080 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RAM_17080 IPR001623 DnaJ domain RAM_17080 IPR008971 HSP40/DnaJ peptide-binding RAM_17080 IPR002939 Chaperone DnaJ, C-terminal RAM_17085 IPR000873 AMP-dependent synthetase/ligase RAM_17085 IPR042099 AMP-dependent synthetase-like superfamily RAM_17085 IPR025110 AMP-binding enzyme, C-terminal domain RAM_17085 IPR020845 AMP-binding, conserved site RAM_17100 IPR018052 Aldose 1-epimerase, conserved site RAM_17100 IPR015443 Aldose 1-epimerase RAM_17100 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase RAM_17100 IPR011013 Galactose mutarotase-like domain superfamily RAM_17100 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_17110 IPR004869 Membrane transport protein MMPL domain RAM_17110 IPR000731 Sterol-sensing domain RAM_17115 IPR036259 MFS transporter superfamily RAM_17115 IPR023721 Multidrug resistance protein MdtD RAM_17115 IPR011701 Major facilitator superfamily RAM_17115 IPR020846 Major facilitator superfamily domain RAM_17120 IPR000873 AMP-dependent synthetase/ligase RAM_17120 IPR042099 AMP-dependent synthetase-like superfamily RAM_17125 IPR014043 Acyl transferase RAM_17125 IPR036736 ACP-like superfamily RAM_17125 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_17125 IPR020807 Polyketide synthase, dehydratase domain RAM_17125 IPR009081 Phosphopantetheine binding ACP domain RAM_17125 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_17125 IPR013968 Polyketide synthase, ketoreductase domain RAM_17125 IPR018201 Beta-ketoacyl synthase, active site RAM_17125 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_17125 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_17125 IPR016039 Thiolase-like RAM_17125 IPR006162 Phosphopantetheine attachment site RAM_17125 IPR036291 NAD(P)-binding domain superfamily RAM_17125 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_17125 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_17125 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_17125 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_17130 IPR029045 ClpP/crotonase-like domain superfamily RAM_17130 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RAM_17130 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RAM_17130 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RAM_17130 IPR034733 Acetyl-CoA carboxylase RAM_17170 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_17170 IPR036291 NAD(P)-binding domain superfamily RAM_17175 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_17175 IPR036291 NAD(P)-binding domain superfamily RAM_17175 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_17180 IPR001753 Enoyl-CoA hydratase/isomerase RAM_17180 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_17180 IPR029045 ClpP/crotonase-like domain superfamily RAM_17185 IPR037171 NagB/RpiA transferase-like RAM_17185 IPR004165 Coenzyme A transferase family I RAM_17190 IPR004165 Coenzyme A transferase family I RAM_17190 IPR037171 NagB/RpiA transferase-like RAM_17195 IPR004136 Nitronate monooxygenase RAM_17195 IPR013785 Aldolase-type TIM barrel RAM_17200 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related RAM_17200 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase RAM_17200 IPR036661 Luciferase-like domain superfamily RAM_17200 IPR011251 Luciferase-like domain RAM_17205 IPR020613 Thiolase, conserved site RAM_17205 IPR002155 Thiolase RAM_17205 IPR020616 Thiolase, N-terminal RAM_17205 IPR020617 Thiolase, C-terminal RAM_17205 IPR016039 Thiolase-like RAM_17210 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_17210 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_17210 IPR036291 NAD(P)-binding domain superfamily RAM_17215 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_17215 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_17215 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_17215 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_17215 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_17215 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_17220 IPR000873 AMP-dependent synthetase/ligase RAM_17220 IPR020845 AMP-binding, conserved site RAM_17220 IPR025110 AMP-binding enzyme, C-terminal domain RAM_17220 IPR042099 AMP-dependent synthetase-like superfamily RAM_17225 IPR001753 Enoyl-CoA hydratase/isomerase RAM_17225 IPR029045 ClpP/crotonase-like domain superfamily RAM_17230 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_17230 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_17230 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_17230 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_17230 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_17230 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_17235 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_17235 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_17235 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_17235 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_17235 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_17235 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_17240 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_17240 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_17240 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_17240 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_17240 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_17240 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_17255 IPR036390 Winged helix DNA-binding domain superfamily RAM_17255 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_17255 IPR011711 GntR, C-terminal RAM_17255 IPR000524 Transcription regulator HTH, GntR RAM_17255 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_17260 IPR009003 Peptidase S1, PA clan RAM_17260 IPR040255 Non-specific endonuclease RAM_17260 IPR020821 Extracellular Endonuclease, subunit A RAM_17260 IPR001604 DNA/RNA non-specific endonuclease RAM_17275 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_17275 IPR013154 Alcohol dehydrogenase, N-terminal RAM_17275 IPR020843 Polyketide synthase, enoylreductase domain RAM_17275 IPR013149 Alcohol dehydrogenase, C-terminal RAM_17275 IPR036291 NAD(P)-binding domain superfamily RAM_17275 IPR011032 GroES-like superfamily RAM_17280 IPR029058 Alpha/Beta hydrolase fold RAM_17280 IPR000639 Epoxide hydrolase-like RAM_17280 IPR000073 Alpha/beta hydrolase fold-1 RAM_17285 IPR029787 Nucleotide cyclase RAM_17285 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase RAM_17285 IPR003660 HAMP domain RAM_17295 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_17295 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_17295 IPR023753 FAD/NAD(P)-binding domain RAM_17295 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_17300 IPR023769 Nucleoid occlusion factor SlmA RAM_17300 IPR009057 Homeobox-like domain superfamily RAM_17300 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_17300 IPR001647 DNA-binding HTH domain, TetR-type RAM_17305 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative RAM_17305 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp RAM_17305 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP RAM_17305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_17320 IPR013780 Glycosyl hydrolase, all-beta RAM_17320 IPR017853 Glycoside hydrolase superfamily RAM_17320 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain RAM_17320 IPR013785 Aldolase-type TIM barrel RAM_17320 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_17320 IPR002241 Glycoside hydrolase, family 27 RAM_17325 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_17325 IPR000843 LacI-type HTH domain RAM_17325 IPR028082 Periplasmic binding protein-like I RAM_17330 IPR006061 Solute-binding family 1, conserved site RAM_17330 IPR006059 Bacterial extracellular solute-binding protein RAM_17335 IPR035906 MetI-like superfamily RAM_17335 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_17340 IPR035906 MetI-like superfamily RAM_17340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_17345 IPR008928 Six-hairpin glycosidase superfamily RAM_17345 IPR012878 Beta-L-arabinofuranosidase, GH127 RAM_17365 IPR000013 Peptidase M7, snapalysin RAM_17365 IPR024079 Metallopeptidase, catalytic domain superfamily RAM_17370 IPR001647 DNA-binding HTH domain, TetR-type RAM_17370 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_17370 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_17370 IPR009057 Homeobox-like domain superfamily RAM_17375 IPR020846 Major facilitator superfamily domain RAM_17375 IPR036259 MFS transporter superfamily RAM_17375 IPR011701 Major facilitator superfamily RAM_17390 IPR000600 ROK family RAM_17390 IPR004654 Glucokinase ROK RAM_17395 IPR004758 Amino acid transporter RAM_17395 IPR002293 Amino acid/polyamine transporter I RAM_17400 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_17400 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain RAM_17400 IPR013783 Immunoglobulin-like fold RAM_17400 IPR005084 Carbohydrate binding module family 6 RAM_17400 IPR017853 Glycoside hydrolase superfamily RAM_17400 IPR028829 Exo-beta-D-glucosaminidase RAM_17400 IPR008979 Galactose-binding-like domain superfamily RAM_17400 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_17400 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_17405 IPR000600 ROK family RAM_17405 IPR004654 Glucokinase ROK RAM_17415 IPR028082 Periplasmic binding protein-like I RAM_17415 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_17415 IPR000843 LacI-type HTH domain RAM_17415 IPR023588 Transcription regulator HTH, PurR RAM_17430 IPR036396 Cytochrome P450 superfamily RAM_17430 IPR017972 Cytochrome P450, conserved site RAM_17430 IPR001128 Cytochrome P450 RAM_17430 IPR002397 Cytochrome P450, B-class RAM_17460 IPR020103 Pseudouridine synthase, catalytic domain superfamily RAM_17460 IPR036986 RNA-binding S4 domain superfamily RAM_17460 IPR006145 Pseudouridine synthase, RsuA/RluA RAM_17460 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RAM_17460 IPR006225 Pseudouridine synthase, RluC/RluD RAM_17460 IPR002942 RNA-binding S4 domain RAM_17470 IPR000835 MarR-type HTH domain RAM_17470 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_17470 IPR036390 Winged helix DNA-binding domain superfamily RAM_17475 IPR019914 Pyrimidine monooxygenase RutA RAM_17475 IPR036661 Luciferase-like domain superfamily RAM_17475 IPR011251 Luciferase-like domain RAM_17485 IPR007341 Transglycosylase-associated protein RAM_17490 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_17490 IPR001279 Metallo-beta-lactamase RAM_17525 IPR042099 AMP-dependent synthetase-like superfamily RAM_17525 IPR020845 AMP-binding, conserved site RAM_17525 IPR025110 AMP-binding enzyme, C-terminal domain RAM_17525 IPR000873 AMP-dependent synthetase/ligase RAM_17530 IPR036523 SurE-like phosphatase/nucleotidase superfamily RAM_17530 IPR002828 Survival protein SurE-like phosphatase/nucleotidase RAM_17530 IPR030048 Survival protein SurE RAM_17550 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_17550 IPR036291 NAD(P)-binding domain superfamily RAM_17550 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 RAM_17550 IPR011032 GroES-like superfamily RAM_17550 IPR013154 Alcohol dehydrogenase, N-terminal RAM_17555 IPR036291 NAD(P)-binding domain superfamily RAM_17555 IPR001509 NAD-dependent epimerase/dehydratase RAM_17580 IPR032466 Metal-dependent hydrolase RAM_17580 IPR023100 D-aminoacylase, insert domain superfamily RAM_17580 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_17580 IPR013108 Amidohydrolase 3 RAM_17595 IPR010197 o-Succinylbenzoate synthase, MenC type 2 RAM_17595 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_17595 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_17595 IPR029017 Enolase-like, N-terminal RAM_17595 IPR036849 Enolase-like, C-terminal domain superfamily RAM_17595 IPR029065 Enolase C-terminal domain-like RAM_17600 IPR001466 Beta-lactamase-related RAM_17600 IPR012338 Beta-lactamase/transpeptidase-like RAM_17615 IPR035906 MetI-like superfamily RAM_17615 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_17620 IPR003593 AAA+ ATPase domain RAM_17620 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_17620 IPR017871 ABC transporter, conserved site RAM_17620 IPR003439 ABC transporter-like RAM_17620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_17625 IPR017871 ABC transporter, conserved site RAM_17625 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_17625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_17625 IPR003439 ABC transporter-like RAM_17625 IPR003593 AAA+ ATPase domain RAM_17630 IPR001466 Beta-lactamase-related RAM_17630 IPR012338 Beta-lactamase/transpeptidase-like RAM_17635 IPR004638 Drug resistance transporter EmrB-like RAM_17635 IPR036259 MFS transporter superfamily RAM_17635 IPR011701 Major facilitator superfamily RAM_17635 IPR020846 Major facilitator superfamily domain RAM_17655 IPR036291 NAD(P)-binding domain superfamily RAM_17655 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_17655 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_17655 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_17660 IPR036259 MFS transporter superfamily RAM_17660 IPR020846 Major facilitator superfamily domain RAM_17660 IPR011701 Major facilitator superfamily RAM_17665 IPR017972 Cytochrome P450, conserved site RAM_17665 IPR002397 Cytochrome P450, B-class RAM_17665 IPR001128 Cytochrome P450 RAM_17665 IPR036396 Cytochrome P450 superfamily RAM_17670 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_17670 IPR006197 Peptidase S24, LexA-like RAM_17670 IPR006199 LexA repressor, DNA-binding domain RAM_17670 IPR036390 Winged helix DNA-binding domain superfamily RAM_17670 IPR036286 LexA/Signal peptidase-like superfamily RAM_17670 IPR006200 Transcription regulator LexA RAM_17670 IPR039418 LexA-like RAM_17670 IPR015927 Peptidase S24/S26A/S26B/S26C RAM_17675 IPR004302 Cellulose/chitin-binding protein, N-terminal RAM_17675 IPR014756 Immunoglobulin E-set RAM_17685 IPR036291 NAD(P)-binding domain superfamily RAM_17685 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_17685 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_17685 IPR020843 Polyketide synthase, enoylreductase domain RAM_17685 IPR020807 Polyketide synthase, dehydratase domain RAM_17685 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_17685 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_17685 IPR013968 Polyketide synthase, ketoreductase domain RAM_17685 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_17685 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_17685 IPR006162 Phosphopantetheine attachment site RAM_17685 IPR011032 GroES-like superfamily RAM_17685 IPR013154 Alcohol dehydrogenase, N-terminal RAM_17685 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_17685 IPR009081 Phosphopantetheine binding ACP domain RAM_17685 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_17685 IPR014043 Acyl transferase RAM_17685 IPR036736 ACP-like superfamily RAM_17685 IPR001227 Acyl transferase domain superfamily RAM_17685 IPR016039 Thiolase-like RAM_17685 IPR018201 Beta-ketoacyl synthase, active site RAM_17685 IPR036299 Polyketide synthase, docking domain superfmaily RAM_17690 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RAM_17690 IPR006710 Glycoside hydrolase, family 43 RAM_17690 IPR006584 Cellulose binding, type IV RAM_17690 IPR008979 Galactose-binding-like domain superfamily RAM_17690 IPR005084 Carbohydrate binding module family 6 RAM_17705 IPR002937 Amine oxidase RAM_17705 IPR001613 Flavin amine oxidase RAM_17705 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_17710 IPR017583 Tagatose/fructose phosphokinase RAM_17710 IPR029056 Ribokinase-like RAM_17710 IPR022463 Fructose 1-phosphate kinase RAM_17710 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_17710 IPR011611 Carbohydrate kinase PfkB RAM_17715 IPR001303 Class II aldolase/adducin N-terminal RAM_17715 IPR005251 Methylthioribose-1-phosphate isomerase RAM_17715 IPR017714 Methylthioribulose-1-phosphate dehydratase RAM_17715 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal RAM_17715 IPR011559 Initiation factor 2B alpha/beta/delta RAM_17715 IPR037171 NagB/RpiA transferase-like RAM_17715 IPR036409 Class II aldolase/adducin N-terminal domain superfamily RAM_17715 IPR000649 Initiation factor 2B-related RAM_17725 IPR000390 Small multidrug resistance protein family RAM_17730 IPR036291 NAD(P)-binding domain superfamily RAM_17730 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_17730 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_17735 IPR005524 Predicted permease DUF318 RAM_17750 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_17750 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_17750 IPR000792 Transcription regulator LuxR, C-terminal RAM_17750 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_17750 IPR016032 Signal transduction response regulator, C-terminal effector RAM_17760 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_17760 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_17760 IPR036291 NAD(P)-binding domain superfamily RAM_17770 IPR000873 AMP-dependent synthetase/ligase RAM_17770 IPR020845 AMP-binding, conserved site RAM_17770 IPR042099 AMP-dependent synthetase-like superfamily RAM_17770 IPR025110 AMP-binding enzyme, C-terminal domain RAM_17775 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted RAM_17775 IPR011251 Luciferase-like domain RAM_17775 IPR036661 Luciferase-like domain superfamily RAM_17780 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_17780 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_17780 IPR036291 NAD(P)-binding domain superfamily RAM_17790 IPR018201 Beta-ketoacyl synthase, active site RAM_17790 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 RAM_17790 IPR016039 Thiolase-like RAM_17790 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_17790 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_17790 IPR000794 Beta-ketoacyl synthase RAM_17790 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_17805 IPR005247 YbhB/YbcL RAM_17805 IPR036610 PEBP-like superfamily RAM_17805 IPR008914 Phosphatidylethanolamine-binding protein RAM_17820 IPR013149 Alcohol dehydrogenase, C-terminal RAM_17820 IPR013154 Alcohol dehydrogenase, N-terminal RAM_17820 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_17820 IPR011032 GroES-like superfamily RAM_17820 IPR036291 NAD(P)-binding domain superfamily RAM_17820 IPR020843 Polyketide synthase, enoylreductase domain RAM_17825 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RAM_17825 IPR006258 Dihydrolipoamide dehydrogenase RAM_17825 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_17825 IPR023753 FAD/NAD(P)-binding domain RAM_17825 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RAM_17825 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RAM_17825 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_17835 IPR016032 Signal transduction response regulator, C-terminal effector RAM_17835 IPR000792 Transcription regulator LuxR, C-terminal RAM_17835 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_17835 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_17850 IPR018303 P-type ATPase, phosphorylation site RAM_17850 IPR017969 Heavy-metal-associated, conserved site RAM_17850 IPR023298 P-type ATPase, transmembrane domain superfamily RAM_17850 IPR008250 P-type ATPase, A domain superfamily RAM_17850 IPR023299 P-type ATPase, cytoplasmic domain N RAM_17850 IPR001757 P-type ATPase RAM_17850 IPR027256 P-type ATPase, subfamily IB RAM_17850 IPR036163 Heavy metal-associated domain superfamily RAM_17850 IPR023214 HAD superfamily RAM_17850 IPR006121 Heavy metal-associated domain, HMA RAM_17850 IPR000579 Cation-transporting P-type ATPase A/B RAM_17850 IPR036412 HAD-like superfamily RAM_17855 IPR001915 Peptidase M48 RAM_17855 IPR022919 Peptidase M48, protease HtpX, putative RAM_17885 IPR005025 NADPH-dependent FMN reductase-like RAM_17885 IPR001046 NRAMP family RAM_17885 IPR029039 Flavoprotein-like superfamily RAM_17890 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily RAM_17890 IPR003148 Regulator of K+ conductance, N-terminal RAM_17890 IPR006037 Regulator of K+ conductance, C-terminal RAM_17890 IPR038770 Sodium/solute symporter superfamily RAM_17890 IPR006153 Cation/H+ exchanger RAM_17890 IPR036291 NAD(P)-binding domain superfamily RAM_17920 IPR001509 NAD-dependent epimerase/dehydratase RAM_17920 IPR008279 PEP-utilising enzyme, mobile domain RAM_17920 IPR036291 NAD(P)-binding domain superfamily RAM_17920 IPR036637 Phosphohistidine domain superfamily RAM_17925 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_17925 IPR001650 Helicase, C-terminal RAM_17925 IPR022138 Helicase SWF/SNF-related RAM_17925 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_17925 IPR000330 SNF2-related, N-terminal domain RAM_17925 IPR038718 SNF2-like, N-terminal domain superfamily RAM_17930 IPR007527 Zinc finger, SWIM-type RAM_17965 IPR027545 Kynurenine 3-monooxygenase RAM_17965 IPR002938 FAD-binding domain RAM_17965 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_17995 IPR013785 Aldolase-type TIM barrel RAM_17995 IPR027283 Glutamate synthase large subunit-like protein, bacteria RAM_17995 IPR024188 Glutamate synthase large subunit-like protein RAM_17995 IPR002932 Glutamate synthase domain RAM_18000 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_18000 IPR016032 Signal transduction response regulator, C-terminal effector RAM_18000 IPR001789 Signal transduction response regulator, receiver domain RAM_18000 IPR039420 Transcriptional regulatory protein WalR-like RAM_18000 IPR011006 CheY-like superfamily RAM_18000 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_18005 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_18005 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_18005 IPR031967 PhoR, single Cache-like domain RAM_18005 IPR013767 PAS fold RAM_18005 IPR035965 PAS domain superfamily RAM_18005 IPR000014 PAS domain RAM_18005 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_18005 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_18005 IPR005467 Histidine kinase domain RAM_18005 IPR003594 Histidine kinase/HSP90-like ATPase RAM_18020 IPR017871 ABC transporter, conserved site RAM_18020 IPR003593 AAA+ ATPase domain RAM_18020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_18020 IPR025857 MacB-like periplasmic core domain RAM_18020 IPR017911 ABC transporter, macrolide export, ATP-binding domain RAM_18020 IPR003439 ABC transporter-like RAM_18020 IPR003838 ABC transporter permease protein domain RAM_18025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_18025 IPR003838 ABC transporter permease protein domain RAM_18025 IPR003439 ABC transporter-like RAM_18025 IPR003593 AAA+ ATPase domain RAM_18025 IPR017911 ABC transporter, macrolide export, ATP-binding domain RAM_18025 IPR017871 ABC transporter, conserved site RAM_18025 IPR025857 MacB-like periplasmic core domain RAM_18040 IPR005829 Sugar transporter, conserved site RAM_18040 IPR003663 Sugar/inositol transporter RAM_18040 IPR036259 MFS transporter superfamily RAM_18040 IPR005828 Major facilitator, sugar transporter-like RAM_18040 IPR020846 Major facilitator superfamily domain RAM_18045 IPR000639 Epoxide hydrolase-like RAM_18045 IPR000073 Alpha/beta hydrolase fold-1 RAM_18045 IPR029058 Alpha/Beta hydrolase fold RAM_18055 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_18055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_18060 IPR011006 CheY-like superfamily RAM_18060 IPR000792 Transcription regulator LuxR, C-terminal RAM_18060 IPR001789 Signal transduction response regulator, receiver domain RAM_18060 IPR016032 Signal transduction response regulator, C-terminal effector RAM_18065 IPR012338 Beta-lactamase/transpeptidase-like RAM_18065 IPR001466 Beta-lactamase-related RAM_18085 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_18085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_18100 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_18100 IPR036291 NAD(P)-binding domain superfamily RAM_18115 IPR009057 Homeobox-like domain superfamily RAM_18115 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like RAM_18115 IPR018062 HTH domain AraC-type, conserved site RAM_18115 IPR018060 DNA binding HTH domain, AraC-type RAM_18125 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_18125 IPR036291 NAD(P)-binding domain superfamily RAM_18130 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_18130 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_18130 IPR036291 NAD(P)-binding domain superfamily RAM_18185 IPR017972 Cytochrome P450, conserved site RAM_18185 IPR001128 Cytochrome P450 RAM_18185 IPR002397 Cytochrome P450, B-class RAM_18185 IPR036396 Cytochrome P450 superfamily RAM_18205 IPR011006 CheY-like superfamily RAM_18205 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_18205 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_18205 IPR039420 Transcriptional regulatory protein WalR-like RAM_18205 IPR001789 Signal transduction response regulator, receiver domain RAM_18210 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_18210 IPR003660 HAMP domain RAM_18210 IPR003594 Histidine kinase/HSP90-like ATPase RAM_18210 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_18210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_18210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_18210 IPR005467 Histidine kinase domain RAM_18230 IPR026402 Chitooligosaccharide deacetylase NodB RAM_18230 IPR002509 NodB homology domain RAM_18230 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RAM_18255 IPR000014 PAS domain RAM_18255 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RAM_18255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_18255 IPR013656 PAS fold-4 RAM_18255 IPR035965 PAS domain superfamily RAM_18255 IPR035909 Methylesterase CheB, C-terminal RAM_18255 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal RAM_18255 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal RAM_18255 IPR000780 MCP methyltransferase, CheR-type RAM_18260 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RAM_18260 IPR035909 Methylesterase CheB, C-terminal RAM_18265 IPR002938 FAD-binding domain RAM_18265 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_18285 IPR013154 Alcohol dehydrogenase, N-terminal RAM_18285 IPR013149 Alcohol dehydrogenase, C-terminal RAM_18285 IPR011032 GroES-like superfamily RAM_18285 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_18285 IPR036291 NAD(P)-binding domain superfamily RAM_18285 IPR004627 L-threonine 3-dehydrogenase RAM_18300 IPR001765 Carbonic anhydrase RAM_18300 IPR036874 Carbonic anhydrase superfamily RAM_18320 IPR013094 Alpha/beta hydrolase fold-3 RAM_18320 IPR029058 Alpha/Beta hydrolase fold RAM_18350 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_18350 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_18350 IPR036291 NAD(P)-binding domain superfamily RAM_18355 IPR036322 WD40-repeat-containing domain superfamily RAM_18355 IPR038765 Papain-like cysteine peptidase superfamily RAM_18355 IPR015943 WD40/YVTN repeat-like-containing domain superfamily RAM_18355 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain RAM_18355 IPR001680 WD40 repeat RAM_18355 IPR019775 WD40 repeat, conserved site RAM_18355 IPR029030 Caspase-like domain superfamily RAM_18355 IPR020472 G-protein beta WD-40 repeat RAM_18355 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_18355 IPR017986 WD40-repeat-containing domain RAM_18370 IPR015358 Transcription regulator MerR, DNA binding RAM_18370 IPR011789 Cu(I)-responsive transcriptional regulator RAM_18370 IPR000551 MerR-type HTH domain RAM_18370 IPR009061 Putative DNA-binding domain superfamily RAM_18380 IPR037401 SnoaL-like domain RAM_18380 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_18380 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_18380 IPR039425 RNA polymerase sigma-70 like RAM_18380 IPR013325 RNA polymerase sigma factor, region 2 RAM_18380 IPR014284 RNA polymerase sigma-70 like domain RAM_18380 IPR032710 NTF2-like domain superfamily RAM_18380 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_18380 IPR007627 RNA polymerase sigma-70 region 2 RAM_18380 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_18380 IPR014305 RNA polymerase sigma-G type, actinobacteria RAM_18405 IPR036365 PGBD-like superfamily RAM_18405 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily RAM_18405 IPR013230 Peptidase M15A, C-terminal RAM_18405 IPR036366 PGBD superfamily RAM_18405 IPR002477 Peptidoglycan binding-like RAM_18420 IPR019734 Tetratricopeptide repeat RAM_18420 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_18420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_18420 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_18420 IPR002182 NB-ARC RAM_18420 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_18420 IPR016032 Signal transduction response regulator, C-terminal effector RAM_18420 IPR005158 Bacterial transcriptional activator domain RAM_18425 IPR016032 Signal transduction response regulator, C-terminal effector RAM_18425 IPR011006 CheY-like superfamily RAM_18425 IPR000792 Transcription regulator LuxR, C-terminal RAM_18425 IPR001789 Signal transduction response regulator, receiver domain RAM_18430 IPR002582 Holo-[acyl carrier protein] synthase RAM_18430 IPR004568 Phosphopantetheine-protein transferase domain RAM_18430 IPR037143 4'-phosphopantetheinyl transferase domain superfamily RAM_18430 IPR008278 4'-phosphopantetheinyl transferase domain RAM_18435 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_18435 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_18435 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_18435 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_18435 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_18435 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_18435 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_18450 IPR006162 Phosphopantetheine attachment site RAM_18450 IPR009081 Phosphopantetheine binding ACP domain RAM_18450 IPR036736 ACP-like superfamily RAM_18450 IPR003231 Acyl carrier protein (ACP) RAM_18455 IPR002986 Diaminopimelate decarboxylase, LysA RAM_18455 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RAM_18455 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RAM_18455 IPR029066 PLP-binding barrel RAM_18455 IPR000183 Ornithine/DAP/Arg decarboxylase RAM_18455 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RAM_18455 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RAM_18475 IPR025302 Domain of unknown function DUF4162 RAM_18475 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_18475 IPR003593 AAA+ ATPase domain RAM_18475 IPR017871 ABC transporter, conserved site RAM_18475 IPR003439 ABC transporter-like RAM_18475 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_18485 IPR031730 Carbamoyltransferase, C-terminal RAM_18485 IPR003696 Carbamoyltransferase RAM_18485 IPR038152 Carbamoyltransferase, C-terminal domain superfamily RAM_18520 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RAM_18520 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RAM_18520 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RAM_18520 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RAM_18525 IPR005107 CO dehydrogenase flavoprotein, C-terminal RAM_18525 IPR016166 FAD-binding domain, PCMH-type RAM_18525 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_18525 IPR036318 FAD-binding, type PCMH-like superfamily RAM_18525 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily RAM_18525 IPR002346 Molybdopterin dehydrogenase, FAD-binding RAM_18530 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RAM_18530 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_18530 IPR012675 Beta-grasp domain superfamily RAM_18530 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_18530 IPR002888 [2Fe-2S]-binding RAM_18530 IPR036884 [2Fe-2S]-binding domain superfamily RAM_18530 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_18530 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_18540 IPR013780 Glycosyl hydrolase, all-beta RAM_18540 IPR013785 Aldolase-type TIM barrel RAM_18540 IPR002241 Glycoside hydrolase, family 27 RAM_18540 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_18540 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain RAM_18540 IPR017853 Glycoside hydrolase superfamily RAM_18575 IPR004378 F420H(2)-dependent quinone reductase RAM_18575 IPR012349 FMN-binding split barrel RAM_18585 IPR009057 Homeobox-like domain superfamily RAM_18585 IPR001647 DNA-binding HTH domain, TetR-type RAM_18585 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_18590 IPR036908 RlpA-like domain superfamily RAM_18605 IPR012338 Beta-lactamase/transpeptidase-like RAM_18605 IPR001466 Beta-lactamase-related RAM_18615 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_18615 IPR036291 NAD(P)-binding domain superfamily RAM_18615 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_18620 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_18620 IPR000847 Transcription regulator HTH, LysR RAM_18620 IPR005119 LysR, substrate-binding RAM_18620 IPR036390 Winged helix DNA-binding domain superfamily RAM_18660 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_18660 IPR036736 ACP-like superfamily RAM_18660 IPR009081 Phosphopantetheine binding ACP domain RAM_18660 IPR001227 Acyl transferase domain superfamily RAM_18660 IPR011032 GroES-like superfamily RAM_18660 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_18660 IPR006162 Phosphopantetheine attachment site RAM_18660 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_18660 IPR013968 Polyketide synthase, ketoreductase domain RAM_18660 IPR020807 Polyketide synthase, dehydratase domain RAM_18660 IPR018201 Beta-ketoacyl synthase, active site RAM_18660 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_18660 IPR014043 Acyl transferase RAM_18660 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_18660 IPR016039 Thiolase-like RAM_18660 IPR036291 NAD(P)-binding domain superfamily RAM_18660 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_18660 IPR015083 Polyketide synthase, docking domain RAM_18660 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_18660 IPR020843 Polyketide synthase, enoylreductase domain RAM_18660 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_18660 IPR013154 Alcohol dehydrogenase, N-terminal RAM_18660 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_18690 IPR000073 Alpha/beta hydrolase fold-1 RAM_18690 IPR000639 Epoxide hydrolase-like RAM_18690 IPR029058 Alpha/Beta hydrolase fold RAM_18695 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain RAM_18695 IPR005119 LysR, substrate-binding RAM_18695 IPR000847 Transcription regulator HTH, LysR RAM_18695 IPR036390 Winged helix DNA-binding domain superfamily RAM_18695 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_18720 IPR018208 Glycoside hydrolase family 11, active site 1 RAM_18720 IPR013319 Glycoside hydrolase family 11/12 RAM_18720 IPR033123 Glycosyl hydrolases family 11 (GH11) domain RAM_18720 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_18720 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RAM_18720 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_18720 IPR001919 Carbohydrate-binding type-2 domain RAM_18720 IPR001137 Glycoside hydrolase family 11 RAM_18720 IPR002509 NodB homology domain RAM_18720 IPR033119 Glycoside hydrolase family 11, active site 2 RAM_18720 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RAM_18720 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_18725 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RAM_18725 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase RAM_18725 IPR006710 Glycoside hydrolase, family 43 RAM_18735 IPR029058 Alpha/Beta hydrolase fold RAM_18740 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_18740 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_18740 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_18740 IPR009081 Phosphopantetheine binding ACP domain RAM_18740 IPR016039 Thiolase-like RAM_18740 IPR018201 Beta-ketoacyl synthase, active site RAM_18740 IPR001227 Acyl transferase domain superfamily RAM_18740 IPR036736 ACP-like superfamily RAM_18740 IPR014043 Acyl transferase RAM_18740 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_18740 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_18740 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_18740 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_18740 IPR001242 Condensation domain RAM_18740 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_18745 IPR010071 Amino acid adenylation domain RAM_18745 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_18745 IPR029058 Alpha/Beta hydrolase fold RAM_18745 IPR036736 ACP-like superfamily RAM_18745 IPR025110 AMP-binding enzyme, C-terminal domain RAM_18745 IPR042099 AMP-dependent synthetase-like superfamily RAM_18745 IPR000873 AMP-dependent synthetase/ligase RAM_18745 IPR001031 Thioesterase RAM_18745 IPR006162 Phosphopantetheine attachment site RAM_18745 IPR009081 Phosphopantetheine binding ACP domain RAM_18745 IPR001242 Condensation domain RAM_18745 IPR020802 Polyketide synthase, thioesterase domain RAM_18745 IPR010060 Non-ribosomal peptide synthase RAM_18745 IPR020845 AMP-binding, conserved site RAM_18755 IPR020845 AMP-binding, conserved site RAM_18755 IPR025110 AMP-binding enzyme, C-terminal domain RAM_18755 IPR036736 ACP-like superfamily RAM_18755 IPR000873 AMP-dependent synthetase/ligase RAM_18755 IPR006162 Phosphopantetheine attachment site RAM_18755 IPR010060 Non-ribosomal peptide synthase RAM_18755 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_18755 IPR036291 NAD(P)-binding domain superfamily RAM_18755 IPR013120 Male sterility, NAD-binding RAM_18755 IPR001242 Condensation domain RAM_18755 IPR042099 AMP-dependent synthetase-like superfamily RAM_18755 IPR010071 Amino acid adenylation domain RAM_18755 IPR009081 Phosphopantetheine binding ACP domain RAM_18755 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_18755 IPR010080 Thioester reductase-like domain RAM_18760 IPR000873 AMP-dependent synthetase/ligase RAM_18760 IPR001242 Condensation domain RAM_18760 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_18760 IPR006162 Phosphopantetheine attachment site RAM_18760 IPR042099 AMP-dependent synthetase-like superfamily RAM_18760 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_18760 IPR020845 AMP-binding, conserved site RAM_18760 IPR025110 AMP-binding enzyme, C-terminal domain RAM_18760 IPR036736 ACP-like superfamily RAM_18760 IPR029058 Alpha/Beta hydrolase fold RAM_18760 IPR009081 Phosphopantetheine binding ACP domain RAM_18760 IPR010071 Amino acid adenylation domain RAM_18760 IPR001031 Thioesterase RAM_18765 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_18765 IPR020845 AMP-binding, conserved site RAM_18765 IPR009081 Phosphopantetheine binding ACP domain RAM_18765 IPR010071 Amino acid adenylation domain RAM_18765 IPR036736 ACP-like superfamily RAM_18765 IPR006162 Phosphopantetheine attachment site RAM_18765 IPR025110 AMP-binding enzyme, C-terminal domain RAM_18765 IPR000873 AMP-dependent synthetase/ligase RAM_18765 IPR001242 Condensation domain RAM_18765 IPR010060 Non-ribosomal peptide synthase RAM_18765 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_18765 IPR042099 AMP-dependent synthetase-like superfamily RAM_18790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_18790 IPR003660 HAMP domain RAM_18790 IPR003594 Histidine kinase/HSP90-like ATPase RAM_18790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_18790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_18790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_18790 IPR005467 Histidine kinase domain RAM_18795 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_18795 IPR016032 Signal transduction response regulator, C-terminal effector RAM_18795 IPR001789 Signal transduction response regulator, receiver domain RAM_18795 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_18795 IPR039420 Transcriptional regulatory protein WalR-like RAM_18795 IPR011006 CheY-like superfamily RAM_18805 IPR016032 Signal transduction response regulator, C-terminal effector RAM_18805 IPR000792 Transcription regulator LuxR, C-terminal RAM_18805 IPR001789 Signal transduction response regulator, receiver domain RAM_18805 IPR011006 CheY-like superfamily RAM_18810 IPR005467 Histidine kinase domain RAM_18810 IPR007895 MASE1 RAM_18810 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_18810 IPR003594 Histidine kinase/HSP90-like ATPase RAM_18810 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_18825 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_18825 IPR002938 FAD-binding domain RAM_18840 IPR001207 Transposase, mutator type RAM_18860 IPR023769 Nucleoid occlusion factor SlmA RAM_18860 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_18860 IPR001647 DNA-binding HTH domain, TetR-type RAM_18860 IPR009057 Homeobox-like domain superfamily RAM_18860 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_18865 IPR036291 NAD(P)-binding domain superfamily RAM_18865 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_18865 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_18870 IPR011991 ArsR-like helix-turn-helix domain RAM_18870 IPR000485 AsnC-type HTH domain RAM_18870 IPR036390 Winged helix DNA-binding domain superfamily RAM_18870 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_18870 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RAM_18870 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RAM_18870 IPR011008 Dimeric alpha-beta barrel RAM_18870 IPR019888 Transcription regulator AsnC-type RAM_18880 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_18880 IPR013968 Polyketide synthase, ketoreductase domain RAM_18880 IPR020843 Polyketide synthase, enoylreductase domain RAM_18880 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_18880 IPR020807 Polyketide synthase, dehydratase domain RAM_18880 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_18880 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_18880 IPR036291 NAD(P)-binding domain superfamily RAM_18880 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_18880 IPR018201 Beta-ketoacyl synthase, active site RAM_18880 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_18880 IPR011032 GroES-like superfamily RAM_18880 IPR009081 Phosphopantetheine binding ACP domain RAM_18880 IPR006162 Phosphopantetheine attachment site RAM_18880 IPR013154 Alcohol dehydrogenase, N-terminal RAM_18880 IPR036736 ACP-like superfamily RAM_18880 IPR014043 Acyl transferase RAM_18880 IPR036299 Polyketide synthase, docking domain superfmaily RAM_18880 IPR016039 Thiolase-like RAM_18880 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_18880 IPR001227 Acyl transferase domain superfamily RAM_18880 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_18885 IPR013094 Alpha/beta hydrolase fold-3 RAM_18885 IPR029058 Alpha/Beta hydrolase fold RAM_18900 IPR023230 Glycoside hydrolase, family 2, conserved site RAM_18900 IPR032312 Beta-galactosidase, domain 4 RAM_18900 IPR004199 Beta galactosidase small chain/ domain 5 RAM_18900 IPR013783 Immunoglobulin-like fold RAM_18900 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_18900 IPR011013 Galactose mutarotase-like domain superfamily RAM_18900 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_18900 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_18900 IPR017853 Glycoside hydrolase superfamily RAM_18900 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_18900 IPR006101 Glycoside hydrolase, family 2 RAM_18900 IPR023232 Glycoside hydrolase, family 2, active site RAM_18900 IPR006103 Glycoside hydrolase family 2, catalytic domain RAM_18900 IPR008979 Galactose-binding-like domain superfamily RAM_18900 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase RAM_18905 IPR003610 Carbohydrate-binding module family 5/12 RAM_18905 IPR029070 Chitinase insertion domain superfamily RAM_18905 IPR003961 Fibronectin type III RAM_18905 IPR036116 Fibronectin type III superfamily RAM_18905 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_18905 IPR011583 Chitinase II RAM_18905 IPR001579 Glycoside hydrolase, chitinase active site RAM_18905 IPR017853 Glycoside hydrolase superfamily RAM_18905 IPR036573 Carbohydrate-binding module superfamily 5/12 RAM_18905 IPR013783 Immunoglobulin-like fold RAM_18925 IPR036259 MFS transporter superfamily RAM_18925 IPR020846 Major facilitator superfamily domain RAM_18925 IPR011701 Major facilitator superfamily RAM_18935 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RAM_18935 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RAM_18935 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RAM_18935 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RAM_18945 IPR002346 Molybdopterin dehydrogenase, FAD-binding RAM_18945 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_18945 IPR036318 FAD-binding, type PCMH-like superfamily RAM_18945 IPR016166 FAD-binding domain, PCMH-type RAM_18945 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily RAM_18945 IPR005107 CO dehydrogenase flavoprotein, C-terminal RAM_18950 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RAM_18950 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_18950 IPR012675 Beta-grasp domain superfamily RAM_18950 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_18950 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_18950 IPR036884 [2Fe-2S]-binding domain superfamily RAM_18950 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_18950 IPR002888 [2Fe-2S]-binding RAM_18955 IPR020846 Major facilitator superfamily domain RAM_18955 IPR011701 Major facilitator superfamily RAM_18955 IPR036259 MFS transporter superfamily RAM_18960 IPR013154 Alcohol dehydrogenase, N-terminal RAM_18960 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_18960 IPR027399 Alcohol dehydrogenase GroES-associated RAM_18960 IPR036291 NAD(P)-binding domain superfamily RAM_18960 IPR013149 Alcohol dehydrogenase, C-terminal RAM_18960 IPR011032 GroES-like superfamily RAM_18985 IPR015655 Protein phosphatase 2C family RAM_18985 IPR001932 PPM-type phosphatase domain RAM_18985 IPR036457 PPM-type phosphatase domain superfamily RAM_19015 IPR008270 Glycoside hydrolase, family 25, active site RAM_19015 IPR018077 Glycoside hydrolase, family 25 subgroup RAM_19015 IPR017853 Glycoside hydrolase superfamily RAM_19015 IPR002053 Glycoside hydrolase, family 25 RAM_19030 IPR000802 Arsenical pump membrane protein, ArsB RAM_19030 IPR004680 Citrate transporter-like domain RAM_19035 IPR024038 MYXO-CTERM domain RAM_19035 IPR010126 Esterase, PHB depolymerase RAM_19035 IPR029058 Alpha/Beta hydrolase fold RAM_19040 IPR008928 Six-hairpin glycosidase superfamily RAM_19040 IPR030875 Sulfoquinovose isomerase RAM_19040 IPR034116 AGE domain RAM_19040 IPR012341 Six-hairpin glycosidase-like superfamily RAM_19045 IPR000600 ROK family RAM_19045 IPR036390 Winged helix DNA-binding domain superfamily RAM_19045 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_19045 IPR000835 MarR-type HTH domain RAM_19050 IPR030678 Peptide/nickel binding protein, MppA-type RAM_19050 IPR039424 Solute-binding protein family 5 RAM_19050 IPR000914 Solute-binding protein family 5 domain RAM_19050 IPR023765 Solute-binding protein family 5, conserved site RAM_19055 IPR035906 MetI-like superfamily RAM_19055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_19060 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_19060 IPR017871 ABC transporter, conserved site RAM_19060 IPR003439 ABC transporter-like RAM_19060 IPR003593 AAA+ ATPase domain RAM_19060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_19065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_19065 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_19065 IPR017871 ABC transporter, conserved site RAM_19065 IPR003593 AAA+ ATPase domain RAM_19065 IPR003439 ABC transporter-like RAM_19075 IPR028082 Periplasmic binding protein-like I RAM_19075 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_19075 IPR000843 LacI-type HTH domain RAM_19080 IPR000805 Glycoside hydrolase family 26 RAM_19080 IPR022790 Glycosyl hydrolase family 26 domain RAM_19080 IPR008979 Galactose-binding-like domain superfamily RAM_19080 IPR026444 Secretion system C-terminal sorting domain RAM_19080 IPR005084 Carbohydrate binding module family 6 RAM_19080 IPR017853 Glycoside hydrolase superfamily RAM_19090 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_19090 IPR000600 ROK family RAM_19090 IPR036390 Winged helix DNA-binding domain superfamily RAM_19095 IPR038417 Alpha-galactosidase, N-terminal domain superfamily RAM_19095 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_19095 IPR002252 Glycoside hydrolase family 36 RAM_19095 IPR031705 Glycosyl hydrolase family 36, C-terminal RAM_19095 IPR017853 Glycoside hydrolase superfamily RAM_19095 IPR031704 Glycosyl hydrolase family 36, N-terminal RAM_19095 IPR013785 Aldolase-type TIM barrel RAM_19100 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_19100 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_19100 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_19100 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_19100 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RAM_19105 IPR014710 RmlC-like jelly roll fold RAM_19105 IPR032783 AraC-type transcription regulator, ligand-binding domain RAM_19105 IPR020449 Transcription regulator HTH, AraC- type RAM_19105 IPR009057 Homeobox-like domain superfamily RAM_19105 IPR018062 HTH domain AraC-type, conserved site RAM_19105 IPR011051 RmlC-like cupin domain superfamily RAM_19105 IPR018060 DNA binding HTH domain, AraC-type RAM_19115 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_19115 IPR002938 FAD-binding domain RAM_19165 IPR036908 RlpA-like domain superfamily RAM_19165 IPR009009 RlpA-like protein, double-psi beta-barrel domain RAM_19175 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_19175 IPR039420 Transcriptional regulatory protein WalR-like RAM_19175 IPR011006 CheY-like superfamily RAM_19175 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_19175 IPR001789 Signal transduction response regulator, receiver domain RAM_19180 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_19180 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_19180 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_19180 IPR003594 Histidine kinase/HSP90-like ATPase RAM_19180 IPR003660 HAMP domain RAM_19180 IPR005467 Histidine kinase domain RAM_19180 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_19190 IPR002656 Acyltransferase 3 RAM_19190 IPR036514 SGNH hydrolase superfamily RAM_19215 IPR000639 Epoxide hydrolase-like RAM_19215 IPR000073 Alpha/beta hydrolase fold-1 RAM_19215 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal RAM_19215 IPR029058 Alpha/Beta hydrolase fold RAM_19220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_19220 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC RAM_19220 IPR013216 Methyltransferase type 11 RAM_19230 IPR036390 Winged helix DNA-binding domain superfamily RAM_19230 IPR011991 ArsR-like helix-turn-helix domain RAM_19230 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_19230 IPR001845 HTH ArsR-type DNA-binding domain RAM_19250 IPR027394 Cytochrome-c3 hydrogenase, C-terminal RAM_19250 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily RAM_19250 IPR001821 [NiFe]-hydrogenase, small subunit RAM_19250 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily RAM_19250 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RAM_19265 IPR011125 Zinc finger, HypF-type RAM_19265 IPR006070 YrdC-like domain RAM_19265 IPR036046 Acylphosphatase-like domain superfamily RAM_19265 IPR001792 Acylphosphatase-like domain RAM_19265 IPR017968 Acylphosphatase, conserved site RAM_19265 IPR004421 Carbamoyltransferase, HypF-type RAM_19265 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RAM_19265 IPR041440 HypF, Kae1-like domain RAM_19270 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RAM_19270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_19270 IPR004392 Hydrogenase maturation factor HypB RAM_19275 IPR000688 Hydrogenase maturation factor HypA/HybF RAM_19275 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site RAM_19280 IPR010918 PurM-like, C-terminal domain RAM_19280 IPR011854 Carbamoyl dehydratase HypE RAM_19280 IPR036676 PurM-like, C-terminal domain superfamily RAM_19280 IPR036921 PurM-like, N-terminal domain superfamily RAM_19280 IPR016188 PurM-like, N-terminal domain RAM_19285 IPR042243 HypD, domain 2 RAM_19285 IPR042244 HypD, domain 1 RAM_19285 IPR002780 Hydrogenase formation HypD protein RAM_19290 IPR019812 Hydrogenase assembly chaperone, conserved site RAM_19290 IPR001109 Hydrogenase expression/formation protein, HupF/HypC RAM_19290 IPR037254 HupF/HypC superfamily RAM_19320 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site RAM_19320 IPR001501 Nickel-dependent hydrogenase, large subunit RAM_19320 IPR029014 [NiFe]-hydrogenase, large subunit RAM_19325 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily RAM_19325 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily RAM_19325 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit RAM_19325 IPR001821 [NiFe]-hydrogenase, small subunit RAM_19325 IPR027394 Cytochrome-c3 hydrogenase, C-terminal RAM_19330 IPR035461 GmhA/DiaA RAM_19330 IPR004515 Phosphoheptose isomerase RAM_19330 IPR001347 Sugar isomerase (SIS) RAM_19340 IPR004515 Phosphoheptose isomerase RAM_19340 IPR035461 GmhA/DiaA RAM_19340 IPR001347 Sugar isomerase (SIS) RAM_19380 IPR005158 Bacterial transcriptional activator domain RAM_19380 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_19380 IPR013026 Tetratricopeptide repeat-containing domain RAM_19380 IPR016032 Signal transduction response regulator, C-terminal effector RAM_19380 IPR002182 NB-ARC RAM_19380 IPR019734 Tetratricopeptide repeat RAM_19380 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_19380 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_19380 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_19385 IPR029058 Alpha/Beta hydrolase fold RAM_19385 IPR000639 Epoxide hydrolase-like RAM_19385 IPR000073 Alpha/beta hydrolase fold-1 RAM_19390 IPR011032 GroES-like superfamily RAM_19390 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_19390 IPR013149 Alcohol dehydrogenase, C-terminal RAM_19390 IPR013154 Alcohol dehydrogenase, N-terminal RAM_19390 IPR020843 Polyketide synthase, enoylreductase domain RAM_19390 IPR036291 NAD(P)-binding domain superfamily RAM_19390 IPR004627 L-threonine 3-dehydrogenase RAM_19395 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_19395 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_19395 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_19395 IPR029045 ClpP/crotonase-like domain superfamily RAM_19395 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_19395 IPR001753 Enoyl-CoA hydratase/isomerase RAM_19395 IPR012802 Fatty oxidation complex, alpha subunit FadJ RAM_19395 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RAM_19395 IPR036291 NAD(P)-binding domain superfamily RAM_19400 IPR036390 Winged helix DNA-binding domain superfamily RAM_19400 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_19400 IPR002577 Helix-turn-helix, HxlR type RAM_19420 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_19420 IPR009057 Homeobox-like domain superfamily RAM_19420 IPR001647 DNA-binding HTH domain, TetR-type RAM_19425 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_19425 IPR013154 Alcohol dehydrogenase, N-terminal RAM_19425 IPR011032 GroES-like superfamily RAM_19425 IPR018201 Beta-ketoacyl synthase, active site RAM_19425 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_19425 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_19425 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_19425 IPR036291 NAD(P)-binding domain superfamily RAM_19425 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_19425 IPR020807 Polyketide synthase, dehydratase domain RAM_19425 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_19425 IPR020843 Polyketide synthase, enoylreductase domain RAM_19425 IPR013968 Polyketide synthase, ketoreductase domain RAM_19425 IPR009081 Phosphopantetheine binding ACP domain RAM_19425 IPR006162 Phosphopantetheine attachment site RAM_19425 IPR016039 Thiolase-like RAM_19425 IPR036736 ACP-like superfamily RAM_19425 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_19425 IPR014043 Acyl transferase RAM_19425 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_19430 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_19430 IPR036291 NAD(P)-binding domain superfamily RAM_19430 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_19430 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_19435 IPR036661 Luciferase-like domain superfamily RAM_19435 IPR011251 Luciferase-like domain RAM_19440 IPR036291 NAD(P)-binding domain superfamily RAM_19440 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_19445 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_19445 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_19445 IPR036291 NAD(P)-binding domain superfamily RAM_19480 IPR017871 ABC transporter, conserved site RAM_19480 IPR003593 AAA+ ATPase domain RAM_19480 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RAM_19480 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_19480 IPR003439 ABC transporter-like RAM_19485 IPR017871 ABC transporter, conserved site RAM_19485 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_19485 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RAM_19485 IPR003593 AAA+ ATPase domain RAM_19485 IPR003439 ABC transporter-like RAM_19490 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_19490 IPR029045 ClpP/crotonase-like domain superfamily RAM_19490 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_19490 IPR001753 Enoyl-CoA hydratase/isomerase RAM_19495 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_19495 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_19495 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_19495 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_19495 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_19495 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_19500 IPR020845 AMP-binding, conserved site RAM_19500 IPR042099 AMP-dependent synthetase-like superfamily RAM_19500 IPR025110 AMP-binding enzyme, C-terminal domain RAM_19500 IPR000873 AMP-dependent synthetase/ligase RAM_19505 IPR042171 Acyl-CoA thioesterase, double hotdog domain RAM_19505 IPR003703 Acyl-CoA thioesterase RAM_19505 IPR025652 Acyl-CoA thioesterase II domain RAM_19505 IPR029069 HotDog domain superfamily RAM_19515 IPR029045 ClpP/crotonase-like domain superfamily RAM_19515 IPR001753 Enoyl-CoA hydratase/isomerase RAM_19515 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_19515 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_19520 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_19520 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_19520 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_19520 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_19520 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_19520 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_19525 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_19525 IPR015590 Aldehyde dehydrogenase domain RAM_19525 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RAM_19525 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_19525 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_19525 IPR016161 Aldehyde/histidinol dehydrogenase RAM_19535 IPR003673 CoA-transferase family III RAM_19535 IPR023606 CoA-transferase family III domain superfamily RAM_19540 IPR016039 Thiolase-like RAM_19540 IPR020616 Thiolase, N-terminal RAM_19540 IPR002155 Thiolase RAM_19540 IPR020613 Thiolase, conserved site RAM_19540 IPR020617 Thiolase, C-terminal RAM_19545 IPR013785 Aldolase-type TIM barrel RAM_19545 IPR004136 Nitronate monooxygenase RAM_19550 IPR001279 Metallo-beta-lactamase RAM_19550 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_19555 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_19555 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RAM_19555 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RAM_19555 IPR030876 3-sulfolactaldehyde reductase RAM_19555 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_19555 IPR036291 NAD(P)-binding domain superfamily RAM_19555 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RAM_19555 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RAM_19560 IPR015590 Aldehyde dehydrogenase domain RAM_19560 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_19560 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_19560 IPR016161 Aldehyde/histidinol dehydrogenase RAM_19580 IPR029069 HotDog domain superfamily RAM_19580 IPR003703 Acyl-CoA thioesterase RAM_19600 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_19600 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_19600 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_19600 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_19600 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_19600 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_19600 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_19620 IPR002155 Thiolase RAM_19620 IPR020615 Thiolase, acyl-enzyme intermediate active site RAM_19620 IPR012793 Beta-ketoadipyl CoA thiolase RAM_19620 IPR020617 Thiolase, C-terminal RAM_19620 IPR020616 Thiolase, N-terminal RAM_19620 IPR020613 Thiolase, conserved site RAM_19620 IPR020610 Thiolase, active site RAM_19620 IPR016039 Thiolase-like RAM_19625 IPR036291 NAD(P)-binding domain superfamily RAM_19625 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_19625 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_19635 IPR002155 Thiolase RAM_19635 IPR020613 Thiolase, conserved site RAM_19635 IPR020616 Thiolase, N-terminal RAM_19635 IPR012805 Acetyl-CoA C-acyltransferase FadA RAM_19635 IPR020617 Thiolase, C-terminal RAM_19635 IPR020610 Thiolase, active site RAM_19635 IPR016039 Thiolase-like RAM_19635 IPR020615 Thiolase, acyl-enzyme intermediate active site RAM_19640 IPR029045 ClpP/crotonase-like domain superfamily RAM_19640 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_19640 IPR001753 Enoyl-CoA hydratase/isomerase RAM_19640 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_19650 IPR001360 Glycoside hydrolase family 1 RAM_19650 IPR018120 Glycoside hydrolase family 1, active site RAM_19650 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase RAM_19650 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RAM_19650 IPR017853 Glycoside hydrolase superfamily RAM_19655 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_19655 IPR036291 NAD(P)-binding domain superfamily RAM_19655 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_19665 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_19665 IPR036291 NAD(P)-binding domain superfamily RAM_19665 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_19665 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_19670 IPR029045 ClpP/crotonase-like domain superfamily RAM_19670 IPR001753 Enoyl-CoA hydratase/isomerase RAM_19670 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_19670 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_19675 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_19675 IPR001753 Enoyl-CoA hydratase/isomerase RAM_19675 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_19675 IPR029045 ClpP/crotonase-like domain superfamily RAM_19680 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_19680 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_19680 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_19680 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_19680 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_19680 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_19685 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_19685 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_19685 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_19685 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_19685 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_19685 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_19690 IPR020845 AMP-binding, conserved site RAM_19690 IPR000873 AMP-dependent synthetase/ligase RAM_19690 IPR042099 AMP-dependent synthetase-like superfamily RAM_19690 IPR025110 AMP-binding enzyme, C-terminal domain RAM_19710 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_19710 IPR036390 Winged helix DNA-binding domain superfamily RAM_19710 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_19710 IPR011711 GntR, C-terminal RAM_19710 IPR000524 Transcription regulator HTH, GntR RAM_19715 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_19715 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_19715 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_19715 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_19715 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_19715 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_19715 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_19730 IPR016161 Aldehyde/histidinol dehydrogenase RAM_19730 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_19730 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_19730 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC RAM_19735 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_19735 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_19735 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_19735 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_19735 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_19735 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_19740 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_19740 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_19740 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_19740 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_19740 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_19740 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_19745 IPR029045 ClpP/crotonase-like domain superfamily RAM_19745 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_19745 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_19745 IPR001753 Enoyl-CoA hydratase/isomerase RAM_19750 IPR000524 Transcription regulator HTH, GntR RAM_19750 IPR011663 UbiC transcription regulator-associated RAM_19750 IPR036390 Winged helix DNA-binding domain superfamily RAM_19750 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RAM_19750 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_19755 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_19755 IPR036291 NAD(P)-binding domain superfamily RAM_19755 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_19760 IPR000489 Pterin-binding domain RAM_19760 IPR006390 Dihydropteroate synthase RAM_19760 IPR011005 Dihydropteroate synthase-like RAM_19765 IPR025110 AMP-binding enzyme, C-terminal domain RAM_19765 IPR020845 AMP-binding, conserved site RAM_19765 IPR000873 AMP-dependent synthetase/ligase RAM_19765 IPR042099 AMP-dependent synthetase-like superfamily RAM_19780 IPR029058 Alpha/Beta hydrolase fold RAM_19780 IPR000073 Alpha/beta hydrolase fold-1 RAM_19790 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_19790 IPR009057 Homeobox-like domain superfamily RAM_19790 IPR001647 DNA-binding HTH domain, TetR-type RAM_19795 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RAM_19795 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_19795 IPR014614 Uncharacterised conserved protein UCP036654 RAM_19800 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RAM_19800 IPR024078 Putative deacetylase LmbE-like domain superfamily RAM_19805 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_19805 IPR019734 Tetratricopeptide repeat RAM_19805 IPR013026 Tetratricopeptide repeat-containing domain RAM_19805 IPR016032 Signal transduction response regulator, C-terminal effector RAM_19805 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_19805 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_19805 IPR002182 NB-ARC RAM_19805 IPR005158 Bacterial transcriptional activator domain RAM_19805 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_19825 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RAM_19825 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RAM_19825 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_19825 IPR009050 Globin-like superfamily RAM_19825 IPR017938 Riboflavin synthase-like beta-barrel RAM_19825 IPR000971 Globin RAM_19825 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_19825 IPR012292 Globin/Protoglobin RAM_19825 IPR001433 Oxidoreductase FAD/NAD(P)-binding RAM_19825 IPR023950 Flavohemoprotein RAM_19830 IPR000600 ROK family RAM_19830 IPR036390 Winged helix DNA-binding domain superfamily RAM_19830 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_19835 IPR010856 Protein of unknown function DUF1479 RAM_19835 IPR027443 Isopenicillin N synthase-like RAM_19840 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RAM_19840 IPR002933 Peptidase M20 RAM_19840 IPR036264 Bacterial exopeptidase dimerisation domain RAM_19840 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RAM_19840 IPR011650 Peptidase M20, dimerisation domain RAM_19850 IPR002293 Amino acid/polyamine transporter I RAM_19855 IPR008928 Six-hairpin glycosidase superfamily RAM_19855 IPR011613 GH15-like domain RAM_19855 IPR012341 Six-hairpin glycosidase-like superfamily RAM_19860 IPR004638 Drug resistance transporter EmrB-like RAM_19860 IPR011701 Major facilitator superfamily RAM_19860 IPR036259 MFS transporter superfamily RAM_19860 IPR020846 Major facilitator superfamily domain RAM_19880 IPR001789 Signal transduction response regulator, receiver domain RAM_19880 IPR016032 Signal transduction response regulator, C-terminal effector RAM_19880 IPR000792 Transcription regulator LuxR, C-terminal RAM_19880 IPR011006 CheY-like superfamily RAM_19910 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_19910 IPR041664 Orc1-like, AAA ATPase domain RAM_19910 IPR011009 Protein kinase-like domain superfamily RAM_19910 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_19910 IPR016236 Serine/threonine-protein kinase PknK, predicted RAM_19910 IPR000719 Protein kinase domain RAM_19910 IPR017441 Protein kinase, ATP binding site RAM_19915 IPR002549 Transmembrane protein TqsA-like RAM_19925 IPR019893 PQQ-dependent dehydrogenase, s-GDH family RAM_19925 IPR011042 Six-bladed beta-propeller, TolB-like RAM_19925 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase RAM_19925 IPR012938 Glucose/Sorbosone dehydrogenase RAM_19935 IPR022616 Glycosyl hydrolase, family 4, C-terminal RAM_19935 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RAM_19935 IPR001088 Glycoside hydrolase, family 4 RAM_19935 IPR019802 Glycoside hydrolase, family 4, conserved site RAM_19935 IPR036291 NAD(P)-binding domain superfamily RAM_19940 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_19940 IPR035906 MetI-like superfamily RAM_19945 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_19945 IPR035906 MetI-like superfamily RAM_19960 IPR036390 Winged helix DNA-binding domain superfamily RAM_19960 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_19960 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RAM_19960 IPR037171 NagB/RpiA transferase-like RAM_19960 IPR001034 DeoR-type HTH domain RAM_19960 IPR014036 DeoR C-terminal sensor domain RAM_19965 IPR035464 AgaS, SIS domain RAM_19965 IPR014180 Sugar isomerase, AgaS RAM_19965 IPR001347 Sugar isomerase (SIS) RAM_19965 IPR035466 GlmS/AgaS, SIS domain 1 RAM_19985 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_19985 IPR005926 Tagatose-6-phosphate kinase RAM_19985 IPR017583 Tagatose/fructose phosphokinase RAM_19985 IPR029056 Ribokinase-like RAM_19985 IPR011611 Carbohydrate kinase PfkB RAM_19990 IPR013785 Aldolase-type TIM barrel RAM_19990 IPR000771 Fructose-bisphosphate aldolase, class-II RAM_19990 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 RAM_20005 IPR020807 Polyketide synthase, dehydratase domain RAM_20005 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_20005 IPR013968 Polyketide synthase, ketoreductase domain RAM_20005 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_20005 IPR009081 Phosphopantetheine binding ACP domain RAM_20005 IPR006162 Phosphopantetheine attachment site RAM_20005 IPR016039 Thiolase-like RAM_20005 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_20005 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_20005 IPR014043 Acyl transferase RAM_20005 IPR036291 NAD(P)-binding domain superfamily RAM_20005 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_20005 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_20005 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_20005 IPR018201 Beta-ketoacyl synthase, active site RAM_20005 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_20005 IPR001227 Acyl transferase domain superfamily RAM_20005 IPR036736 ACP-like superfamily RAM_20010 IPR002397 Cytochrome P450, B-class RAM_20010 IPR001128 Cytochrome P450 RAM_20010 IPR036396 Cytochrome P450 superfamily RAM_20010 IPR017972 Cytochrome P450, conserved site RAM_20020 IPR001227 Acyl transferase domain superfamily RAM_20020 IPR015083 Polyketide synthase, docking domain RAM_20020 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_20020 IPR009081 Phosphopantetheine binding ACP domain RAM_20020 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_20020 IPR013968 Polyketide synthase, ketoreductase domain RAM_20020 IPR006162 Phosphopantetheine attachment site RAM_20020 IPR016039 Thiolase-like RAM_20020 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_20020 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_20020 IPR018201 Beta-ketoacyl synthase, active site RAM_20020 IPR036736 ACP-like superfamily RAM_20020 IPR036347 Erythronolide synthase, docking domain superfamily RAM_20020 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_20020 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_20020 IPR013154 Alcohol dehydrogenase, N-terminal RAM_20020 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_20020 IPR014043 Acyl transferase RAM_20020 IPR015357 Erythronolide synthase, docking RAM_20020 IPR020807 Polyketide synthase, dehydratase domain RAM_20020 IPR036291 NAD(P)-binding domain superfamily RAM_20020 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_20020 IPR020843 Polyketide synthase, enoylreductase domain RAM_20020 IPR011032 GroES-like superfamily RAM_20030 IPR013325 RNA polymerase sigma factor, region 2 RAM_20030 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_20030 IPR037401 SnoaL-like domain RAM_20030 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_20030 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20030 IPR039425 RNA polymerase sigma-70 like RAM_20030 IPR032710 NTF2-like domain superfamily RAM_20030 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_20030 IPR014284 RNA polymerase sigma-70 like domain RAM_20030 IPR014305 RNA polymerase sigma-G type, actinobacteria RAM_20030 IPR007627 RNA polymerase sigma-70 region 2 RAM_20035 IPR013783 Immunoglobulin-like fold RAM_20035 IPR001956 Carbohydrate-binding module 3 RAM_20035 IPR018221 Glycoside hydrolase family 9, His active site RAM_20035 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites RAM_20035 IPR001701 Glycoside hydrolase family 9 RAM_20035 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_20035 IPR036116 Fibronectin type III superfamily RAM_20035 IPR036966 Carbohydrate-binding module 3 superfamily RAM_20035 IPR003961 Fibronectin type III RAM_20035 IPR001919 Carbohydrate-binding type-2 domain RAM_20035 IPR012341 Six-hairpin glycosidase-like superfamily RAM_20035 IPR008928 Six-hairpin glycosidase superfamily RAM_20035 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_20035 IPR018366 Carbohydrate-binding type-2, conserved site RAM_20055 IPR029058 Alpha/Beta hydrolase fold RAM_20055 IPR000639 Epoxide hydrolase-like RAM_20055 IPR010497 Epoxide hydrolase, N-terminal RAM_20055 IPR016292 Epoxide hydrolase RAM_20055 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_20065 IPR009188 [NiFe]-hydrogenase maturation factor, HypX/HoxX type RAM_20065 IPR005793 Formyl transferase, C-terminal RAM_20065 IPR002376 Formyl transferase, N-terminal RAM_20065 IPR036477 Formyl transferase, N-terminal domain superfamily RAM_20065 IPR011034 Formyl transferase-like, C-terminal domain superfamily RAM_20065 IPR029045 ClpP/crotonase-like domain superfamily RAM_20065 IPR001753 Enoyl-CoA hydratase/isomerase RAM_20070 IPR005158 Bacterial transcriptional activator domain RAM_20070 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20070 IPR013026 Tetratricopeptide repeat-containing domain RAM_20070 IPR002182 NB-ARC RAM_20070 IPR019734 Tetratricopeptide repeat RAM_20070 IPR016032 Signal transduction response regulator, C-terminal effector RAM_20070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_20070 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_20070 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_20080 IPR039421 Type I protein exporter RAM_20080 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_20080 IPR003593 AAA+ ATPase domain RAM_20080 IPR011527 ABC transporter type 1, transmembrane domain RAM_20080 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_20080 IPR011917 ABC transporter, lipid A export, MsbA RAM_20080 IPR003439 ABC transporter-like RAM_20080 IPR017871 ABC transporter, conserved site RAM_20105 IPR015358 Transcription regulator MerR, DNA binding RAM_20105 IPR011789 Cu(I)-responsive transcriptional regulator RAM_20105 IPR009061 Putative DNA-binding domain superfamily RAM_20105 IPR000551 MerR-type HTH domain RAM_20110 IPR020845 AMP-binding, conserved site RAM_20110 IPR042099 AMP-dependent synthetase-like superfamily RAM_20110 IPR030310 Long-chain-fatty-acid--CoA ligase FadD17 RAM_20110 IPR000873 AMP-dependent synthetase/ligase RAM_20110 IPR025110 AMP-binding enzyme, C-terminal domain RAM_20130 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_20130 IPR036291 NAD(P)-binding domain superfamily RAM_20130 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_20135 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site RAM_20135 IPR034593 Mandelate racemase-like RAM_20135 IPR034589 D-mannonate dehydratase-like RAM_20135 IPR036849 Enolase-like, C-terminal domain superfamily RAM_20135 IPR029017 Enolase-like, N-terminal RAM_20135 IPR029065 Enolase C-terminal domain-like RAM_20135 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_20135 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_20140 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_20140 IPR035906 MetI-like superfamily RAM_20145 IPR035906 MetI-like superfamily RAM_20145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_20150 IPR006059 Bacterial extracellular solute-binding protein RAM_20150 IPR006061 Solute-binding family 1, conserved site RAM_20155 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_20155 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20155 IPR000524 Transcription regulator HTH, GntR RAM_20155 IPR036390 Winged helix DNA-binding domain superfamily RAM_20155 IPR011711 GntR, C-terminal RAM_20165 IPR004276 Glycosyltransferase family 28, N-terminal domain RAM_20180 IPR002397 Cytochrome P450, B-class RAM_20180 IPR001128 Cytochrome P450 RAM_20180 IPR036396 Cytochrome P450 superfamily RAM_20180 IPR017972 Cytochrome P450, conserved site RAM_20185 IPR003819 TauD/TfdA-like domain RAM_20185 IPR042098 Taurine dioxygenase TauD-like superfamily RAM_20200 IPR020802 Polyketide synthase, thioesterase domain RAM_20200 IPR009081 Phosphopantetheine binding ACP domain RAM_20200 IPR020845 AMP-binding, conserved site RAM_20200 IPR025110 AMP-binding enzyme, C-terminal domain RAM_20200 IPR036736 ACP-like superfamily RAM_20200 IPR001031 Thioesterase RAM_20200 IPR000873 AMP-dependent synthetase/ligase RAM_20200 IPR042099 AMP-dependent synthetase-like superfamily RAM_20200 IPR029058 Alpha/Beta hydrolase fold RAM_20200 IPR010071 Amino acid adenylation domain RAM_20200 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_20200 IPR001242 Condensation domain RAM_20200 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_20205 IPR036291 NAD(P)-binding domain superfamily RAM_20205 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_20210 IPR001647 DNA-binding HTH domain, TetR-type RAM_20210 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_20210 IPR009057 Homeobox-like domain superfamily RAM_20240 IPR002938 FAD-binding domain RAM_20240 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_20250 IPR022687 DTXR-type HTH domain RAM_20250 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20250 IPR036390 Winged helix DNA-binding domain superfamily RAM_20250 IPR000600 ROK family RAM_20255 IPR000835 MarR-type HTH domain RAM_20255 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20255 IPR000600 ROK family RAM_20255 IPR036390 Winged helix DNA-binding domain superfamily RAM_20270 IPR001851 ABC transporter, permease RAM_20280 IPR004104 Oxidoreductase, C-terminal RAM_20280 IPR008354 Glucose-fructose oxidoreductase, bacterial RAM_20280 IPR036291 NAD(P)-binding domain superfamily RAM_20280 IPR000683 Oxidoreductase, N-terminal RAM_20280 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_20290 IPR013149 Alcohol dehydrogenase, C-terminal RAM_20290 IPR020843 Polyketide synthase, enoylreductase domain RAM_20290 IPR011032 GroES-like superfamily RAM_20290 IPR014188 Acrylyl-CoA reductase AcuI RAM_20290 IPR013154 Alcohol dehydrogenase, N-terminal RAM_20290 IPR036291 NAD(P)-binding domain superfamily RAM_20340 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_20340 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_20340 IPR011075 Tetracyclin repressor-like, C-terminal domain RAM_20340 IPR001647 DNA-binding HTH domain, TetR-type RAM_20340 IPR009057 Homeobox-like domain superfamily RAM_20350 IPR001919 Carbohydrate-binding type-2 domain RAM_20350 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_20350 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_20350 IPR036434 1, 4-beta cellobiohydrolase superfamily RAM_20350 IPR018366 Carbohydrate-binding type-2, conserved site RAM_20350 IPR001524 Glycoside hydrolase, family 6, conserved site RAM_20350 IPR016288 1, 4-beta cellobiohydrolase RAM_20355 IPR031158 Glycosyl hydrolases family 10, active site RAM_20355 IPR001000 Glycoside hydrolase family 10 domain RAM_20355 IPR017853 Glycoside hydrolase superfamily RAM_20355 IPR000772 Ricin B, lectin domain RAM_20355 IPR035992 Ricin B-like lectins RAM_20360 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_20360 IPR000772 Ricin B, lectin domain RAM_20360 IPR035992 Ricin B-like lectins RAM_20360 IPR037176 Osmotin/thaumatin-like superfamily RAM_20360 IPR037398 Glucan endo-1,3-beta-glucosidase RAM_20360 IPR032477 Beta-1,3-glucanase, N-terminal RAM_20365 IPR000772 Ricin B, lectin domain RAM_20365 IPR001000 Glycoside hydrolase family 10 domain RAM_20365 IPR017853 Glycoside hydrolase superfamily RAM_20365 IPR031158 Glycosyl hydrolases family 10, active site RAM_20365 IPR035992 Ricin B-like lectins RAM_20370 IPR013149 Alcohol dehydrogenase, C-terminal RAM_20370 IPR011032 GroES-like superfamily RAM_20370 IPR036291 NAD(P)-binding domain superfamily RAM_20370 IPR020843 Polyketide synthase, enoylreductase domain RAM_20370 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_20370 IPR013154 Alcohol dehydrogenase, N-terminal RAM_20375 IPR001647 DNA-binding HTH domain, TetR-type RAM_20375 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_20375 IPR041467 HTH-type transcriptional repressor Sco4008, C-terminal RAM_20375 IPR009057 Homeobox-like domain superfamily RAM_20380 IPR020845 AMP-binding, conserved site RAM_20380 IPR000873 AMP-dependent synthetase/ligase RAM_20380 IPR042099 AMP-dependent synthetase-like superfamily RAM_20380 IPR025110 AMP-binding enzyme, C-terminal domain RAM_20385 IPR029016 GAF-like domain superfamily RAM_20385 IPR003594 Histidine kinase/HSP90-like ATPase RAM_20385 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_20385 IPR003018 GAF domain RAM_20385 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_20390 IPR020846 Major facilitator superfamily domain RAM_20390 IPR005828 Major facilitator, sugar transporter-like RAM_20390 IPR005829 Sugar transporter, conserved site RAM_20390 IPR036259 MFS transporter superfamily RAM_20395 IPR011118 Tannase/feruloyl esterase RAM_20395 IPR029058 Alpha/Beta hydrolase fold RAM_20400 IPR026891 Fibronectin type III-like domain RAM_20400 IPR019800 Glycoside hydrolase, family 3, active site RAM_20400 IPR002772 Glycoside hydrolase family 3 C-terminal domain RAM_20400 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily RAM_20400 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_20400 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_20400 IPR013783 Immunoglobulin-like fold RAM_20400 IPR017853 Glycoside hydrolase superfamily RAM_20415 IPR001000 Glycoside hydrolase family 10 domain RAM_20415 IPR035992 Ricin B-like lectins RAM_20415 IPR000772 Ricin B, lectin domain RAM_20415 IPR031158 Glycosyl hydrolases family 10, active site RAM_20415 IPR017853 Glycoside hydrolase superfamily RAM_20420 IPR012914 Purine catabolism PurC-like domain RAM_20420 IPR041522 CdaR, GGDEF-like domain RAM_20420 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_20420 IPR025736 PucR C-terminal helix-turn-helix domain RAM_20425 IPR036736 ACP-like superfamily RAM_20425 IPR003231 Acyl carrier protein (ACP) RAM_20425 IPR009081 Phosphopantetheine binding ACP domain RAM_20430 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_20430 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_20430 IPR016039 Thiolase-like RAM_20430 IPR000794 Beta-ketoacyl synthase RAM_20430 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_20435 IPR016039 Thiolase-like RAM_20435 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RAM_20435 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RAM_20435 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal RAM_20440 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase RAM_20440 IPR029044 Nucleotide-diphospho-sugar transferases RAM_20440 IPR001173 Glycosyltransferase 2-like RAM_20445 IPR001128 Cytochrome P450 RAM_20445 IPR002397 Cytochrome P450, B-class RAM_20445 IPR036396 Cytochrome P450 superfamily RAM_20445 IPR017972 Cytochrome P450, conserved site RAM_20450 IPR000873 AMP-dependent synthetase/ligase RAM_20450 IPR020845 AMP-binding, conserved site RAM_20450 IPR025110 AMP-binding enzyme, C-terminal domain RAM_20450 IPR042099 AMP-dependent synthetase-like superfamily RAM_20460 IPR005158 Bacterial transcriptional activator domain RAM_20460 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_20460 IPR016032 Signal transduction response regulator, C-terminal effector RAM_20460 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_20460 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20465 IPR036390 Winged helix DNA-binding domain superfamily RAM_20465 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20465 IPR005119 LysR, substrate-binding RAM_20465 IPR000847 Transcription regulator HTH, LysR RAM_20475 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_20475 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_20475 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_20475 IPR036291 NAD(P)-binding domain superfamily RAM_20485 IPR036291 NAD(P)-binding domain superfamily RAM_20485 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_20490 IPR036390 Winged helix DNA-binding domain superfamily RAM_20490 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20490 IPR000835 MarR-type HTH domain RAM_20490 IPR011991 ArsR-like helix-turn-helix domain RAM_20495 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_20495 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_20495 IPR019734 Tetratricopeptide repeat RAM_20495 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_20495 IPR005158 Bacterial transcriptional activator domain RAM_20495 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20495 IPR002182 NB-ARC RAM_20495 IPR016032 Signal transduction response regulator, C-terminal effector RAM_20495 IPR013026 Tetratricopeptide repeat-containing domain RAM_20500 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RAM_20500 IPR016039 Thiolase-like RAM_20500 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RAM_20500 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal RAM_20505 IPR029066 PLP-binding barrel RAM_20505 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RAM_20505 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RAM_20505 IPR000183 Ornithine/DAP/Arg decarboxylase RAM_20505 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RAM_20505 IPR002986 Diaminopimelate decarboxylase, LysA RAM_20505 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RAM_20515 IPR016032 Signal transduction response regulator, C-terminal effector RAM_20515 IPR001789 Signal transduction response regulator, receiver domain RAM_20515 IPR000792 Transcription regulator LuxR, C-terminal RAM_20515 IPR011006 CheY-like superfamily RAM_20525 IPR025857 MacB-like periplasmic core domain RAM_20525 IPR003838 ABC transporter permease protein domain RAM_20525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_20525 IPR017911 ABC transporter, macrolide export, ATP-binding domain RAM_20525 IPR003593 AAA+ ATPase domain RAM_20525 IPR003439 ABC transporter-like RAM_20525 IPR017871 ABC transporter, conserved site RAM_20555 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_20555 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA RAM_20555 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RAM_20555 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_20560 IPR042099 AMP-dependent synthetase-like superfamily RAM_20560 IPR000873 AMP-dependent synthetase/ligase RAM_20560 IPR006162 Phosphopantetheine attachment site RAM_20560 IPR042099 AMP-dependent synthetase-like superfamily RAM_20560 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_20560 IPR001242 Condensation domain RAM_20560 IPR010060 Non-ribosomal peptide synthase RAM_20560 IPR010071 Amino acid adenylation domain RAM_20560 IPR036736 ACP-like superfamily RAM_20560 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_20560 IPR025110 AMP-binding enzyme, C-terminal domain RAM_20560 IPR020845 AMP-binding, conserved site RAM_20560 IPR006162 Phosphopantetheine attachment site RAM_20560 IPR009081 Phosphopantetheine binding ACP domain RAM_20560 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_20560 IPR000873 AMP-dependent synthetase/ligase RAM_20560 IPR010060 Non-ribosomal peptide synthase RAM_20560 IPR001242 Condensation domain RAM_20560 IPR020845 AMP-binding, conserved site RAM_20560 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_20560 IPR025110 AMP-binding enzyme, C-terminal domain RAM_20560 IPR009081 Phosphopantetheine binding ACP domain RAM_20560 IPR036736 ACP-like superfamily RAM_20560 IPR010071 Amino acid adenylation domain RAM_20570 IPR005153 MbtH-like domain RAM_20570 IPR038020 MbtH-like domain superfamily RAM_20570 IPR037407 MbtH-like protein RAM_20575 IPR003439 ABC transporter-like RAM_20575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_20575 IPR025302 Domain of unknown function DUF4162 RAM_20575 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_20575 IPR017871 ABC transporter, conserved site RAM_20575 IPR003593 AAA+ ATPase domain RAM_20585 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RAM_20585 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_20585 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA RAM_20585 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_20595 IPR011761 ATP-grasp fold RAM_20595 IPR003806 ATP-grasp fold, PylC-type RAM_20600 IPR036291 NAD(P)-binding domain superfamily RAM_20600 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_20600 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_20600 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_20610 IPR000794 Beta-ketoacyl synthase RAM_20610 IPR018201 Beta-ketoacyl synthase, active site RAM_20610 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_20610 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_20610 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 RAM_20610 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_20610 IPR016039 Thiolase-like RAM_20615 IPR009081 Phosphopantetheine binding ACP domain RAM_20615 IPR036736 ACP-like superfamily RAM_20620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_20620 IPR016032 Signal transduction response regulator, C-terminal effector RAM_20620 IPR013026 Tetratricopeptide repeat-containing domain RAM_20620 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_20620 IPR019734 Tetratricopeptide repeat RAM_20620 IPR005158 Bacterial transcriptional activator domain RAM_20620 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20620 IPR002182 NB-ARC RAM_20620 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_20625 IPR035921 F/V-ATP synthase subunit C superfamily RAM_20625 IPR000454 ATP synthase, F0 complex, subunit C RAM_20625 IPR002379 V-ATPase proteolipid subunit C-like domain RAM_20625 IPR038662 F1F0 ATP synthase subunit C superfamily RAM_20625 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site RAM_20645 IPR010126 Esterase, PHB depolymerase RAM_20645 IPR024038 MYXO-CTERM domain RAM_20645 IPR029058 Alpha/Beta hydrolase fold RAM_20650 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_20650 IPR003594 Histidine kinase/HSP90-like ATPase RAM_20650 IPR003660 HAMP domain RAM_20650 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_20650 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_20650 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_20650 IPR005467 Histidine kinase domain RAM_20655 IPR001789 Signal transduction response regulator, receiver domain RAM_20655 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_20655 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20655 IPR039420 Transcriptional regulatory protein WalR-like RAM_20655 IPR011006 CheY-like superfamily RAM_20660 IPR012338 Beta-lactamase/transpeptidase-like RAM_20660 IPR001466 Beta-lactamase-related RAM_20665 IPR020583 Inositol monophosphatase, metal-binding site RAM_20665 IPR033942 Inositol monophosphatase RAM_20665 IPR000760 Inositol monophosphatase-like RAM_20665 IPR020550 Inositol monophosphatase, conserved site RAM_20665 IPR022337 Inositol monophosphatase, SuhB RAM_20670 IPR000847 Transcription regulator HTH, LysR RAM_20670 IPR005119 LysR, substrate-binding RAM_20670 IPR036390 Winged helix DNA-binding domain superfamily RAM_20670 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20685 IPR005829 Sugar transporter, conserved site RAM_20685 IPR020846 Major facilitator superfamily domain RAM_20685 IPR036259 MFS transporter superfamily RAM_20685 IPR005828 Major facilitator, sugar transporter-like RAM_20695 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_20695 IPR036291 NAD(P)-binding domain superfamily RAM_20695 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_20695 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RAM_20695 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_20695 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_20695 IPR022694 3-hydroxyacyl-CoA dehydrogenase RAM_20705 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_20705 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_20705 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_20705 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_20705 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_20705 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_20705 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_20715 IPR036736 ACP-like superfamily RAM_20715 IPR009081 Phosphopantetheine binding ACP domain RAM_20715 IPR006162 Phosphopantetheine attachment site RAM_20715 IPR025110 AMP-binding enzyme, C-terminal domain RAM_20715 IPR010060 Non-ribosomal peptide synthase RAM_20715 IPR020845 AMP-binding, conserved site RAM_20715 IPR000873 AMP-dependent synthetase/ligase RAM_20715 IPR010071 Amino acid adenylation domain RAM_20715 IPR042099 AMP-dependent synthetase-like superfamily RAM_20715 IPR001242 Condensation domain RAM_20715 IPR010060 Non-ribosomal peptide synthase RAM_20715 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_20715 IPR009081 Phosphopantetheine binding ACP domain RAM_20715 IPR006162 Phosphopantetheine attachment site RAM_20715 IPR010071 Amino acid adenylation domain RAM_20715 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_20715 IPR036736 ACP-like superfamily RAM_20715 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_20715 IPR000873 AMP-dependent synthetase/ligase RAM_20715 IPR001242 Condensation domain RAM_20715 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_20715 IPR042099 AMP-dependent synthetase-like superfamily RAM_20715 IPR020845 AMP-binding, conserved site RAM_20715 IPR025110 AMP-binding enzyme, C-terminal domain RAM_20720 IPR010071 Amino acid adenylation domain RAM_20720 IPR036736 ACP-like superfamily RAM_20720 IPR025110 AMP-binding enzyme, C-terminal domain RAM_20720 IPR020845 AMP-binding, conserved site RAM_20720 IPR000873 AMP-dependent synthetase/ligase RAM_20720 IPR042099 AMP-dependent synthetase-like superfamily RAM_20720 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_20720 IPR001242 Condensation domain RAM_20720 IPR042099 AMP-dependent synthetase-like superfamily RAM_20720 IPR000873 AMP-dependent synthetase/ligase RAM_20720 IPR009081 Phosphopantetheine binding ACP domain RAM_20720 IPR020845 AMP-binding, conserved site RAM_20720 IPR025110 AMP-binding enzyme, C-terminal domain RAM_20720 IPR006162 Phosphopantetheine attachment site RAM_20720 IPR010071 Amino acid adenylation domain RAM_20720 IPR006162 Phosphopantetheine attachment site RAM_20720 IPR036736 ACP-like superfamily RAM_20720 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_20720 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_20720 IPR001242 Condensation domain RAM_20720 IPR010060 Non-ribosomal peptide synthase RAM_20720 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_20720 IPR009081 Phosphopantetheine binding ACP domain RAM_20720 IPR010060 Non-ribosomal peptide synthase RAM_20725 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RAM_20725 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal RAM_20725 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RAM_20725 IPR016039 Thiolase-like RAM_20735 IPR002937 Amine oxidase RAM_20735 IPR014105 Carotenoid/retinoid oxidoreductase RAM_20735 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site RAM_20735 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_20740 IPR002937 Amine oxidase RAM_20740 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_20745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_20745 IPR004033 UbiE/COQ5 methyltransferase RAM_20745 IPR023576 UbiE/COQ5 methyltransferase, conserved site RAM_20760 IPR019845 Squalene/phytoene synthase, conserved site RAM_20760 IPR002060 Squalene/phytoene synthase RAM_20760 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head RAM_20760 IPR008949 Isoprenoid synthase domain superfamily RAM_20765 IPR002937 Amine oxidase RAM_20765 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_20765 IPR014105 Carotenoid/retinoid oxidoreductase RAM_20765 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site RAM_20785 IPR002937 Amine oxidase RAM_20785 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_20785 IPR014105 Carotenoid/retinoid oxidoreductase RAM_20815 IPR035906 MetI-like superfamily RAM_20815 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_20820 IPR035906 MetI-like superfamily RAM_20820 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_20835 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_20835 IPR028082 Periplasmic binding protein-like I RAM_20835 IPR000843 LacI-type HTH domain RAM_20855 IPR003961 Fibronectin type III RAM_20855 IPR001919 Carbohydrate-binding type-2 domain RAM_20855 IPR013783 Immunoglobulin-like fold RAM_20855 IPR017853 Glycoside hydrolase superfamily RAM_20855 IPR029070 Chitinase insertion domain superfamily RAM_20855 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_20855 IPR018366 Carbohydrate-binding type-2, conserved site RAM_20855 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_20855 IPR001579 Glycoside hydrolase, chitinase active site RAM_20855 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_20855 IPR036116 Fibronectin type III superfamily RAM_20855 IPR011583 Chitinase II RAM_20865 IPR000185 Protein translocase subunit SecA RAM_20865 IPR020937 SecA conserved site RAM_20865 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_20865 IPR004027 SEC-C motif RAM_20865 IPR011130 SecA, preprotein cross-linking domain RAM_20865 IPR014018 SecA motor DEAD RAM_20865 IPR011115 SecA DEAD-like, N-terminal RAM_20865 IPR036670 SecA, preprotein cross-linking domain superfamily RAM_20865 IPR036266 SecA, Wing/Scaffold superfamily RAM_20865 IPR011116 SecA Wing/Scaffold RAM_20880 IPR017853 Glycoside hydrolase superfamily RAM_20880 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_20880 IPR001919 Carbohydrate-binding type-2 domain RAM_20880 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_20880 IPR018366 Carbohydrate-binding type-2, conserved site RAM_20880 IPR001547 Glycoside hydrolase, family 5 RAM_20880 IPR018087 Glycoside hydrolase, family 5, conserved site RAM_20900 IPR029058 Alpha/Beta hydrolase fold RAM_20900 IPR000073 Alpha/beta hydrolase fold-1 RAM_20910 IPR036661 Luciferase-like domain superfamily RAM_20910 IPR011251 Luciferase-like domain RAM_20920 IPR000763 Catalase-peroxidase haem RAM_20920 IPR002016 Haem peroxidase RAM_20920 IPR019794 Peroxidase, active site RAM_20920 IPR010255 Haem peroxidase superfamily RAM_20920 IPR019793 Peroxidases heam-ligand binding site RAM_20925 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_20925 IPR002481 Ferric-uptake regulator RAM_20925 IPR036390 Winged helix DNA-binding domain superfamily RAM_20930 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain RAM_20930 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily RAM_20930 IPR000398 Thymidylate synthase RAM_20930 IPR020940 Thymidylate synthase, active site RAM_20935 IPR024072 Dihydrofolate reductase-like domain superfamily RAM_20935 IPR012259 Dihydrofolate reductase RAM_20935 IPR001796 Dihydrofolate reductase domain RAM_20935 IPR017925 Dihydrofolate reductase conserved site RAM_20940 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_20940 IPR027424 Glucose Oxidase, domain 2 RAM_20940 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RAM_20940 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RAM_20940 IPR012132 Glucose-methanol-choline oxidoreductase RAM_20940 IPR011533 Oxygen-dependent choline dehydrogenase RAM_20945 IPR016161 Aldehyde/histidinol dehydrogenase RAM_20945 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_20945 IPR015590 Aldehyde dehydrogenase domain RAM_20945 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_20945 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_20950 IPR025202 Phospholipase D-like domain RAM_20950 IPR030872 Cardiolipin synthase B RAM_20950 IPR001736 Phospholipase D/Transphosphatidylase RAM_20970 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RAM_20970 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RAM_20970 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RAM_20980 IPR012348 Ribonucleotide reductase-like RAM_20980 IPR009078 Ferritin-like superfamily RAM_20980 IPR005067 Fatty acid desaturase, type 2 RAM_20985 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily RAM_20985 IPR011395 Alpha glucuronidase RAM_20985 IPR011099 Glycosyl hydrolase family 67, C-terminal RAM_20985 IPR017853 Glycoside hydrolase superfamily RAM_20985 IPR029018 Beta-hexosaminidase-like, domain 2 RAM_20985 IPR011100 Glycosyl hydrolase family 67, catalytic domain RAM_20985 IPR005154 Alpha glucuronidase, N-terminal RAM_21000 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_21000 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_21000 IPR036291 NAD(P)-binding domain superfamily RAM_21040 IPR001789 Signal transduction response regulator, receiver domain RAM_21040 IPR035909 Methylesterase CheB, C-terminal RAM_21040 IPR011006 CheY-like superfamily RAM_21040 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type RAM_21040 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RAM_21045 IPR001789 Signal transduction response regulator, receiver domain RAM_21045 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RAM_21045 IPR011006 CheY-like superfamily RAM_21045 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type RAM_21045 IPR035909 Methylesterase CheB, C-terminal RAM_21055 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal RAM_21055 IPR000014 PAS domain RAM_21055 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal RAM_21055 IPR035909 Methylesterase CheB, C-terminal RAM_21055 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RAM_21055 IPR013656 PAS fold-4 RAM_21055 IPR000780 MCP methyltransferase, CheR-type RAM_21055 IPR035965 PAS domain superfamily RAM_21055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_21065 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RAM_21065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_21065 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RAM_21065 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RAM_21065 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RAM_21065 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RAM_21110 IPR020846 Major facilitator superfamily domain RAM_21110 IPR004638 Drug resistance transporter EmrB-like RAM_21110 IPR005829 Sugar transporter, conserved site RAM_21110 IPR036259 MFS transporter superfamily RAM_21110 IPR011701 Major facilitator superfamily RAM_21125 IPR007061 Protein of unknown function DUF664 RAM_21125 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_21130 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_21130 IPR012340 Nucleic acid-binding, OB-fold RAM_21130 IPR012310 DNA ligase, ATP-dependent, central RAM_21155 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RAM_21155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_21155 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RAM_21155 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW RAM_21155 IPR036627 CobW-like, C-terminal domain superfamily RAM_21160 IPR017142 Nitric oxide synthase, oxygenase subunit RAM_21160 IPR036119 Nitric oxide synthase, N-terminal domain superfamily RAM_21160 IPR004030 Nitric oxide synthase, N-terminal RAM_21170 IPR011701 Major facilitator superfamily RAM_21170 IPR020846 Major facilitator superfamily domain RAM_21170 IPR036259 MFS transporter superfamily RAM_21170 IPR005829 Sugar transporter, conserved site RAM_21180 IPR018383 Uncharacterised protein family UPF0324, prokaryote RAM_21185 IPR000847 Transcription regulator HTH, LysR RAM_21185 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_21185 IPR036390 Winged helix DNA-binding domain superfamily RAM_21185 IPR005119 LysR, substrate-binding RAM_21190 IPR005119 LysR, substrate-binding RAM_21190 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_21190 IPR000847 Transcription regulator HTH, LysR RAM_21190 IPR036390 Winged helix DNA-binding domain superfamily RAM_21210 IPR033810 Carboxypeptidase T RAM_21210 IPR000834 Peptidase M14, carboxypeptidase A RAM_21220 IPR005481 Biotin carboxylase-like, N-terminal domain RAM_21220 IPR011054 Rudiment single hybrid motif RAM_21220 IPR016185 Pre-ATP-grasp domain superfamily RAM_21220 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RAM_21220 IPR005482 Biotin carboxylase, C-terminal RAM_21220 IPR011764 Biotin carboxylation domain RAM_21220 IPR011761 ATP-grasp fold RAM_21220 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RAM_21255 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_21255 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_21255 IPR000524 Transcription regulator HTH, GntR RAM_21255 IPR015424 Pyridoxal phosphate-dependent transferase RAM_21255 IPR004839 Aminotransferase, class I/classII RAM_21255 IPR036390 Winged helix DNA-binding domain superfamily RAM_21260 IPR011701 Major facilitator superfamily RAM_21260 IPR020846 Major facilitator superfamily domain RAM_21260 IPR036259 MFS transporter superfamily RAM_21270 IPR003729 Bifunctional nuclease domain RAM_21270 IPR036104 Bifunctional nuclease superfamily RAM_21275 IPR037401 SnoaL-like domain RAM_21275 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_21275 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_21275 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_21275 IPR007627 RNA polymerase sigma-70 region 2 RAM_21275 IPR014305 RNA polymerase sigma-G type, actinobacteria RAM_21275 IPR014284 RNA polymerase sigma-70 like domain RAM_21275 IPR039425 RNA polymerase sigma-70 like RAM_21275 IPR013325 RNA polymerase sigma factor, region 2 RAM_21275 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_21275 IPR032710 NTF2-like domain superfamily RAM_21285 IPR042099 AMP-dependent synthetase-like superfamily RAM_21285 IPR000873 AMP-dependent synthetase/ligase RAM_21310 IPR012340 Nucleic acid-binding, OB-fold RAM_21310 IPR030390 RNA methyltransferase TrmA, active site RAM_21310 IPR030391 RNA methyltransferase TrmA, conserved site RAM_21310 IPR010280 (Uracil-5)-methyltransferase family RAM_21310 IPR002792 TRAM domain RAM_21310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_21335 IPR033651 LigD polymerase domain, PaeLigD-type RAM_21335 IPR014143 DNA ligase D RAM_21335 IPR014144 DNA ligase D, 3'-phosphoesterase domain RAM_21335 IPR012340 Nucleic acid-binding, OB-fold RAM_21335 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_21335 IPR014145 DNA ligase D, polymerase domain RAM_21335 IPR012310 DNA ligase, ATP-dependent, central RAM_21335 IPR014146 DNA ligase D, ligase domain RAM_21340 IPR011877 Ribokinase RAM_21340 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_21340 IPR029056 Ribokinase-like RAM_21340 IPR002139 Ribokinase/fructokinase RAM_21340 IPR011611 Carbohydrate kinase PfkB RAM_21345 IPR002121 HRDC domain RAM_21345 IPR010997 HRDC-like superfamily RAM_21345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_21345 IPR001650 Helicase, C-terminal RAM_21345 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RAM_21345 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_21345 IPR018982 RQC domain RAM_21345 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_21345 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial RAM_21345 IPR004589 DNA helicase, ATP-dependent, RecQ type RAM_21345 IPR011545 DEAD/DEAH box helicase domain RAM_21375 IPR014145 DNA ligase D, polymerase domain RAM_21375 IPR012340 Nucleic acid-binding, OB-fold RAM_21375 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_21375 IPR012310 DNA ligase, ATP-dependent, central RAM_21375 IPR014146 DNA ligase D, ligase domain RAM_21375 IPR014144 DNA ligase D, 3'-phosphoesterase domain RAM_21375 IPR033649 LigD polymerase domain, MtLigD-type RAM_21395 IPR001647 DNA-binding HTH domain, TetR-type RAM_21395 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_21395 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_21395 IPR009057 Homeobox-like domain superfamily RAM_21395 IPR011075 Tetracyclin repressor-like, C-terminal domain RAM_21405 IPR000073 Alpha/beta hydrolase fold-1 RAM_21405 IPR029058 Alpha/Beta hydrolase fold RAM_21405 IPR022742 Serine aminopeptidase, S33 RAM_21440 IPR026590 Sirtuin family, catalytic core domain RAM_21440 IPR026587 Sirtuin, class II RAM_21440 IPR003000 Sirtuin family RAM_21440 IPR026591 Sirtuin, catalytic core small domain superfamily RAM_21440 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_21455 IPR012081 Alkyl hydroperoxide reductase subunit F RAM_21455 IPR023753 FAD/NAD(P)-binding domain RAM_21455 IPR002109 Glutaredoxin RAM_21455 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RAM_21455 IPR012336 Thioredoxin-like fold RAM_21455 IPR036249 Thioredoxin-like superfamily RAM_21455 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_21460 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_21460 IPR001387 Cro/C1-type helix-turn-helix domain RAM_21465 IPR000182 GNAT domain RAM_21465 IPR016181 Acyl-CoA N-acyltransferase RAM_21475 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RAM_21475 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RAM_21475 IPR031157 Tr-type G domain, conserved site RAM_21475 IPR000795 Transcription factor, GTP-binding domain RAM_21475 IPR005225 Small GTP-binding protein domain RAM_21475 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RAM_21475 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_21475 IPR009000 Translation protein, beta-barrel domain superfamily RAM_21475 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain RAM_21475 IPR004161 Translation elongation factor EFTu-like, domain 2 RAM_21475 IPR033720 Elongation factor Tu, domain 2 RAM_21490 IPR003361 Acetaldehyde dehydrogenase RAM_21490 IPR015426 Acetaldehyde dehydrogenase, C-terminal RAM_21490 IPR000534 Semialdehyde dehydrogenase, NAD-binding RAM_21490 IPR036291 NAD(P)-binding domain superfamily RAM_21495 IPR000891 Pyruvate carboxyltransferase RAM_21495 IPR035685 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain RAM_21495 IPR012425 DmpG-like communication RAM_21495 IPR013785 Aldolase-type TIM barrel RAM_21495 IPR017629 4-hydroxy-2-oxovalerate aldolase RAM_21505 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_21505 IPR002938 FAD-binding domain RAM_21510 IPR041347 MftR, C-terminal RAM_21510 IPR023851 Transcriptional regulator, TetR-type RAM_21510 IPR001647 DNA-binding HTH domain, TetR-type RAM_21510 IPR009057 Homeobox-like domain superfamily RAM_21520 IPR000120 Amidase RAM_21520 IPR023631 Amidase signature domain RAM_21520 IPR036928 Amidase signature (AS) superfamily RAM_21520 IPR020556 Amidase, conserved site RAM_21525 IPR001466 Beta-lactamase-related RAM_21525 IPR012338 Beta-lactamase/transpeptidase-like RAM_21535 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RAM_21535 IPR023546 Methylated-DNA--protein-cysteine methyltransferase RAM_21535 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily RAM_21535 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RAM_21535 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_21535 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RAM_21535 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain RAM_21545 IPR018655 Protein of unknown function DUF2086 RAM_21550 IPR023546 Methylated-DNA--protein-cysteine methyltransferase RAM_21550 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily RAM_21550 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RAM_21550 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain RAM_21550 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RAM_21550 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RAM_21550 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_21555 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_21555 IPR007630 RNA polymerase sigma-70 region 4 RAM_21555 IPR014284 RNA polymerase sigma-70 like domain RAM_21555 IPR039425 RNA polymerase sigma-70 like RAM_21555 IPR007627 RNA polymerase sigma-70 region 2 RAM_21555 IPR013325 RNA polymerase sigma factor, region 2 RAM_21555 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_21560 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RAM_21560 IPR041698 Methyltransferase domain 25 RAM_21560 IPR004556 Methyltransferase HemK-like RAM_21560 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RAM_21560 IPR040758 Release factor glutamine methyltransferase, N-terminal domain RAM_21560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_21575 IPR036390 Winged helix DNA-binding domain superfamily RAM_21575 IPR019888 Transcription regulator AsnC-type RAM_21575 IPR011008 Dimeric alpha-beta barrel RAM_21575 IPR000485 AsnC-type HTH domain RAM_21575 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RAM_21575 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RAM_21575 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_21575 IPR011991 ArsR-like helix-turn-helix domain RAM_21580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_21580 IPR015424 Pyridoxal phosphate-dependent transferase RAM_21580 IPR005814 Aminotransferase class-III RAM_21580 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_21585 IPR036396 Cytochrome P450 superfamily RAM_21585 IPR001128 Cytochrome P450 RAM_21585 IPR002397 Cytochrome P450, B-class RAM_21585 IPR017972 Cytochrome P450, conserved site RAM_21595 IPR011006 CheY-like superfamily RAM_21595 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type RAM_21595 IPR035909 Methylesterase CheB, C-terminal RAM_21595 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RAM_21595 IPR001789 Signal transduction response regulator, receiver domain RAM_21615 IPR008271 Serine/threonine-protein kinase, active site RAM_21615 IPR011009 Protein kinase-like domain superfamily RAM_21615 IPR000719 Protein kinase domain RAM_21615 IPR005543 PASTA domain RAM_21625 IPR001404 Heat shock protein Hsp90 family RAM_21625 IPR003594 Histidine kinase/HSP90-like ATPase RAM_21625 IPR020575 Heat shock protein Hsp90, N-terminal RAM_21625 IPR037196 HSP90, C-terminal domain RAM_21625 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_21625 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_21635 IPR008972 Cupredoxin RAM_21635 IPR028871 Blue (type 1) copper protein, binding site RAM_21635 IPR023511 Plastocyanin, cyanobacteria RAM_21635 IPR002387 Plastocyanin RAM_21635 IPR000923 Blue (type 1) copper domain RAM_21635 IPR001235 Blue (type 1) copper protein, plastocyanin-type RAM_21670 IPR029057 Phosphoribosyltransferase-like RAM_21670 IPR000836 Phosphoribosyltransferase domain RAM_21670 IPR007815 Erythromycin esterase RAM_21700 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_21700 IPR036291 NAD(P)-binding domain superfamily RAM_21700 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_21715 IPR006543 Histidinol-phosphate phosphatase RAM_21715 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase RAM_21715 IPR036412 HAD-like superfamily RAM_21715 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RAM_21715 IPR023214 HAD superfamily RAM_21720 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_21720 IPR016161 Aldehyde/histidinol dehydrogenase RAM_21720 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_21720 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_21720 IPR015590 Aldehyde dehydrogenase domain RAM_21720 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RAM_21740 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_21740 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type RAM_21740 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RAM_21740 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RAM_21740 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily RAM_21740 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RAM_21740 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RAM_21740 IPR036291 NAD(P)-binding domain superfamily RAM_21750 IPR036291 NAD(P)-binding domain superfamily RAM_21750 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_21750 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_21755 IPR029056 Ribokinase-like RAM_21755 IPR011914 RfaE bifunctional protein, domain II RAM_21755 IPR011611 Carbohydrate kinase PfkB RAM_21755 IPR004821 Cytidyltransferase-like domain RAM_21755 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_21755 IPR000943 RNA polymerase sigma-70 RAM_21755 IPR023030 Bifunctional protein HldE RAM_21760 IPR004515 Phosphoheptose isomerase RAM_21760 IPR035461 GmhA/DiaA RAM_21760 IPR001347 Sugar isomerase (SIS) RAM_21765 IPR038152 Carbamoyltransferase, C-terminal domain superfamily RAM_21765 IPR031730 Carbamoyltransferase, C-terminal RAM_21765 IPR003696 Carbamoyltransferase RAM_21770 IPR005886 UDP-glucose 4-epimerase RAM_21770 IPR036291 NAD(P)-binding domain superfamily RAM_21770 IPR001509 NAD-dependent epimerase/dehydratase RAM_21785 IPR029044 Nucleotide-diphospho-sugar transferases RAM_21785 IPR001173 Glycosyltransferase 2-like RAM_21785 IPR007554 CDP-glycerol glycerophosphotransferase RAM_21790 IPR017814 Mycothiol biosynthesis protein, MshA RAM_21790 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_21790 IPR001296 Glycosyl transferase, family 1 RAM_21805 IPR001204 Phosphate transporter RAM_21810 IPR011032 GroES-like superfamily RAM_21810 IPR013149 Alcohol dehydrogenase, C-terminal RAM_21810 IPR013154 Alcohol dehydrogenase, N-terminal RAM_21810 IPR027399 Alcohol dehydrogenase GroES-associated RAM_21810 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_21810 IPR036291 NAD(P)-binding domain superfamily RAM_21815 IPR008979 Galactose-binding-like domain superfamily RAM_21815 IPR036313 PepX, N-terminal domain superfamily RAM_21815 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain RAM_21815 IPR029058 Alpha/Beta hydrolase fold RAM_21815 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal RAM_21815 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain RAM_21815 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase RAM_21825 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_21835 IPR023679 Uncharacterised protein family UPF0761, bacterial RAM_21835 IPR017039 Virulence factor BrkB RAM_21860 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_21860 IPR038010 YhfW, C-terminal Rieske domain RAM_21860 IPR006076 FAD dependent oxidoreductase RAM_21860 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RAM_21860 IPR005805 Rieske iron-sulphur protein, C-terminal RAM_21860 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RAM_21865 IPR011761 ATP-grasp fold RAM_21865 IPR006275 Carbamoyl-phosphate synthase, large subunit RAM_21865 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain RAM_21865 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily RAM_21865 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RAM_21865 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain RAM_21865 IPR011607 Methylglyoxal synthase-like domain RAM_21865 IPR036914 Methylglyoxal synthase-like domain superfamily RAM_21865 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain RAM_21865 IPR016185 Pre-ATP-grasp domain superfamily RAM_21875 IPR007848 Methyltransferase small domain RAM_21875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_21875 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RAM_21875 IPR040758 Release factor glutamine methyltransferase, N-terminal domain RAM_21875 IPR004556 Methyltransferase HemK-like RAM_21875 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RAM_21890 IPR006336 Glutamate--cysteine ligase, GCS2 RAM_21890 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_21890 IPR011793 Putative glutamate--cysteine ligase YbdK RAM_21900 IPR011793 Putative glutamate--cysteine ligase YbdK RAM_21900 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_21900 IPR006336 Glutamate--cysteine ligase, GCS2 RAM_21910 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal RAM_21910 IPR015424 Pyridoxal phosphate-dependent transferase RAM_21910 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_21910 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_21910 IPR000310 Orn/Lys/Arg decarboxylase, major domain RAM_21910 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily RAM_21920 IPR003819 TauD/TfdA-like domain RAM_21920 IPR042098 Taurine dioxygenase TauD-like superfamily RAM_21925 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A RAM_21925 IPR011251 Luciferase-like domain RAM_21925 IPR036661 Luciferase-like domain superfamily RAM_21930 IPR035906 MetI-like superfamily RAM_21930 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_21935 IPR003439 ABC transporter-like RAM_21935 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_21935 IPR003593 AAA+ ATPase domain RAM_21955 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_21955 IPR010497 Epoxide hydrolase, N-terminal RAM_21955 IPR029058 Alpha/Beta hydrolase fold RAM_21955 IPR016292 Epoxide hydrolase RAM_21955 IPR000639 Epoxide hydrolase-like RAM_21965 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_21965 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_21965 IPR016032 Signal transduction response regulator, C-terminal effector RAM_21965 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_21965 IPR000792 Transcription regulator LuxR, C-terminal RAM_21970 IPR002938 FAD-binding domain RAM_21970 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_21975 IPR001310 Histidine triad (HIT) protein RAM_21975 IPR019808 Histidine triad, conserved site RAM_21975 IPR039384 HINT family RAM_21975 IPR011146 HIT-like domain RAM_21975 IPR036265 HIT-like superfamily RAM_21980 IPR008599 Putative sugar diacid recognition RAM_21980 IPR025736 PucR C-terminal helix-turn-helix domain RAM_21980 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_21980 IPR041522 CdaR, GGDEF-like domain RAM_22005 IPR002197 DNA binding HTH domain, Fis-type RAM_22005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_22005 IPR002078 RNA polymerase sigma factor 54 interaction domain RAM_22005 IPR009057 Homeobox-like domain superfamily RAM_22005 IPR029016 GAF-like domain superfamily RAM_22015 IPR003430 Methane/phenol/toluene hydroxylase RAM_22015 IPR012348 Ribonucleotide reductase-like RAM_22015 IPR009078 Ferritin-like superfamily RAM_22020 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RAM_22020 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_22020 IPR017938 Riboflavin synthase-like beta-barrel RAM_22020 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_22020 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_22020 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_22020 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_22020 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RAM_22020 IPR012675 Beta-grasp domain superfamily RAM_22020 IPR001433 Oxidoreductase FAD/NAD(P)-binding RAM_22025 IPR009078 Ferritin-like superfamily RAM_22025 IPR012348 Ribonucleotide reductase-like RAM_22025 IPR003430 Methane/phenol/toluene hydroxylase RAM_22025 IPR012078 Methane/phenol monooxygenase, hydroxylase component RAM_22030 IPR003454 Monooxygenase component MmoB/DmpM RAM_22030 IPR036889 Monooxygenase component MmoB/DmpM superfamily RAM_22050 IPR027410 TCP-1-like chaperonin intermediate domain superfamily RAM_22050 IPR027413 GroEL-like equatorial domain superfamily RAM_22050 IPR027409 GroEL-like apical domain superfamily RAM_22050 IPR001844 Chaperonin Cpn60 RAM_22050 IPR002423 Chaperonin Cpn60/TCP-1 family RAM_22060 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_22060 IPR005158 Bacterial transcriptional activator domain RAM_22060 IPR002182 NB-ARC RAM_22060 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_22060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_22060 IPR016032 Signal transduction response regulator, C-terminal effector RAM_22060 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_22060 IPR019734 Tetratricopeptide repeat RAM_22075 IPR001647 DNA-binding HTH domain, TetR-type RAM_22075 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_22075 IPR009057 Homeobox-like domain superfamily RAM_22080 IPR000639 Epoxide hydrolase-like RAM_22080 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_22080 IPR016292 Epoxide hydrolase RAM_22080 IPR010497 Epoxide hydrolase, N-terminal RAM_22080 IPR029058 Alpha/Beta hydrolase fold RAM_22085 IPR036291 NAD(P)-binding domain superfamily RAM_22085 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_22085 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_22090 IPR040079 Glutathione Transferase family RAM_22090 IPR036249 Thioredoxin-like superfamily RAM_22090 IPR010987 Glutathione S-transferase, C-terminal-like RAM_22090 IPR016639 Glutathione S-transferase Omega/GSH RAM_22090 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RAM_22090 IPR004045 Glutathione S-transferase, N-terminal RAM_22100 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily RAM_22100 IPR023480 Uncharacterised protein family UPF0312/YceI RAM_22100 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RAM_22105 IPR009057 Homeobox-like domain superfamily RAM_22105 IPR001647 DNA-binding HTH domain, TetR-type RAM_22105 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_22120 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_22120 IPR035906 MetI-like superfamily RAM_22135 IPR000843 LacI-type HTH domain RAM_22135 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_22135 IPR028082 Periplasmic binding protein-like I RAM_22135 IPR023588 Transcription regulator HTH, PurR RAM_22145 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_22145 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_22145 IPR013783 Immunoglobulin-like fold RAM_22145 IPR017853 Glycoside hydrolase superfamily RAM_22145 IPR026891 Fibronectin type III-like domain RAM_22145 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily RAM_22145 IPR002772 Glycoside hydrolase family 3 C-terminal domain RAM_22145 IPR037524 PA14/GLEYA domain RAM_22145 IPR011658 PA14 domain RAM_22155 IPR036396 Cytochrome P450 superfamily RAM_22155 IPR001128 Cytochrome P450 RAM_22155 IPR017972 Cytochrome P450, conserved site RAM_22155 IPR002403 Cytochrome P450, E-class, group IV RAM_22165 IPR035919 EAL domain superfamily RAM_22165 IPR000160 GGDEF domain RAM_22165 IPR029787 Nucleotide cyclase RAM_22165 IPR008984 SMAD/FHA domain superfamily RAM_22165 IPR001633 EAL domain RAM_22165 IPR000253 Forkhead-associated (FHA) domain RAM_22180 IPR004017 Cysteine-rich domain RAM_22180 IPR009051 Alpha-helical ferredoxin RAM_22180 IPR023234 NarG-like domain RAM_22180 IPR036197 NarG-like superfamily RAM_22180 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_22180 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_22185 IPR022128 Domain of unknown function DUF3662 RAM_22185 IPR042287 FhaA, N-terminal RAM_22185 IPR008984 SMAD/FHA domain superfamily RAM_22185 IPR000253 Forkhead-associated (FHA) domain RAM_22195 IPR036259 MFS transporter superfamily RAM_22195 IPR005828 Major facilitator, sugar transporter-like RAM_22195 IPR005829 Sugar transporter, conserved site RAM_22195 IPR020846 Major facilitator superfamily domain RAM_22195 IPR011701 Major facilitator superfamily RAM_22195 IPR004736 MFS transporter, metabolite:H symporter RAM_22205 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal RAM_22205 IPR022893 Shikimate dehydrogenase family RAM_22205 IPR041121 SDH, C-terminal RAM_22205 IPR036291 NAD(P)-binding domain superfamily RAM_22225 IPR035906 MetI-like superfamily RAM_22225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_22230 IPR017853 Glycoside hydrolase superfamily RAM_22230 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_22230 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_22230 IPR019800 Glycoside hydrolase, family 3, active site RAM_22230 IPR022956 Beta-hexosaminidase, bacterial RAM_22240 IPR003646 SH3-like domain, bacterial-type RAM_22285 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_22285 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_22285 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_22285 IPR013325 RNA polymerase sigma factor, region 2 RAM_22285 IPR039425 RNA polymerase sigma-70 like RAM_22285 IPR007627 RNA polymerase sigma-70 region 2 RAM_22285 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_22285 IPR014284 RNA polymerase sigma-70 like domain RAM_22295 IPR003018 GAF domain RAM_22295 IPR029016 GAF-like domain superfamily RAM_22295 IPR003594 Histidine kinase/HSP90-like ATPase RAM_22295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_22295 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_22300 IPR016032 Signal transduction response regulator, C-terminal effector RAM_22300 IPR001789 Signal transduction response regulator, receiver domain RAM_22300 IPR011006 CheY-like superfamily RAM_22300 IPR000792 Transcription regulator LuxR, C-terminal RAM_22320 IPR028202 Reductase, C-terminal RAM_22320 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_22320 IPR023753 FAD/NAD(P)-binding domain RAM_22320 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_22325 IPR001474 GTP cyclohydrolase I RAM_22325 IPR018234 GTP cyclohydrolase I, conserved site RAM_22325 IPR020602 GTP cyclohydrolase I domain RAM_22340 IPR028082 Periplasmic binding protein-like I RAM_22340 IPR000843 LacI-type HTH domain RAM_22340 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_22365 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_22365 IPR036291 NAD(P)-binding domain superfamily RAM_22370 IPR013783 Immunoglobulin-like fold RAM_22370 IPR017853 Glycoside hydrolase superfamily RAM_22370 IPR001579 Glycoside hydrolase, chitinase active site RAM_22370 IPR036116 Fibronectin type III superfamily RAM_22370 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_22370 IPR018366 Carbohydrate-binding type-2, conserved site RAM_22370 IPR001919 Carbohydrate-binding type-2 domain RAM_22370 IPR011583 Chitinase II RAM_22370 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_22370 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_22370 IPR029070 Chitinase insertion domain superfamily RAM_22370 IPR003961 Fibronectin type III RAM_22380 IPR015956 Penicillin-binding protein, C-terminal domain superfamily RAM_22380 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily RAM_22380 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RAM_22380 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RAM_22380 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal RAM_22380 IPR012338 Beta-lactamase/transpeptidase-like RAM_22390 IPR028082 Periplasmic binding protein-like I RAM_22390 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_22390 IPR000843 LacI-type HTH domain RAM_22390 IPR023588 Transcription regulator HTH, PurR RAM_22395 IPR025997 Periplasmic binding protein RAM_22395 IPR033893 ABC transporter periplasmic-binding protein YtfQ RAM_22395 IPR028082 Periplasmic binding protein-like I RAM_22400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_22400 IPR003593 AAA+ ATPase domain RAM_22400 IPR003439 ABC transporter-like RAM_22400 IPR017871 ABC transporter, conserved site RAM_22405 IPR001851 ABC transporter, permease RAM_22410 IPR001851 ABC transporter, permease RAM_22415 IPR003305 Carbohydrate-binding, CenC-like RAM_22415 IPR010720 Alpha-L-arabinofuranosidase, C-terminal RAM_22415 IPR017853 Glycoside hydrolase superfamily RAM_22415 IPR013780 Glycosyl hydrolase, all-beta RAM_22415 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RAM_22415 IPR008979 Galactose-binding-like domain superfamily RAM_22420 IPR000577 Carbohydrate kinase, FGGY RAM_22420 IPR018484 Carbohydrate kinase, FGGY, N-terminal RAM_22420 IPR018485 Carbohydrate kinase, FGGY, C-terminal RAM_22420 IPR005929 Ribulokinase RAM_22425 IPR004661 L-ribulose-5-phosphate 4-epimerase RAM_22425 IPR001303 Class II aldolase/adducin N-terminal RAM_22425 IPR036409 Class II aldolase/adducin N-terminal domain superfamily RAM_22430 IPR024664 L-arabinose isomerase, C-terminal RAM_22430 IPR038583 L-arabinose isomerase, N-terminal domain superfamily RAM_22430 IPR004216 L-fucose/L-arabinose isomerase, C-terminal RAM_22430 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily RAM_22430 IPR003762 L-arabinose isomerase RAM_22435 IPR028082 Periplasmic binding protein-like I RAM_22435 IPR025997 Periplasmic binding protein RAM_22440 IPR003439 ABC transporter-like RAM_22440 IPR003593 AAA+ ATPase domain RAM_22440 IPR017871 ABC transporter, conserved site RAM_22440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_22445 IPR001851 ABC transporter, permease RAM_22455 IPR023588 Transcription regulator HTH, PurR RAM_22455 IPR028082 Periplasmic binding protein-like I RAM_22455 IPR000843 LacI-type HTH domain RAM_22455 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_22460 IPR036396 Cytochrome P450 superfamily RAM_22460 IPR017972 Cytochrome P450, conserved site RAM_22460 IPR002397 Cytochrome P450, B-class RAM_22460 IPR001128 Cytochrome P450 RAM_22465 IPR018485 Carbohydrate kinase, FGGY, C-terminal RAM_22465 IPR018483 Carbohydrate kinase, FGGY, conserved site RAM_22465 IPR018484 Carbohydrate kinase, FGGY, N-terminal RAM_22465 IPR000577 Carbohydrate kinase, FGGY RAM_22465 IPR005999 Glycerol kinase RAM_22470 IPR036390 Winged helix DNA-binding domain superfamily RAM_22470 IPR005471 Transcription regulator IclR, N-terminal RAM_22470 IPR014757 Transcription regulator IclR, C-terminal RAM_22470 IPR029016 GAF-like domain superfamily RAM_22470 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_22475 IPR022357 Major intrinsic protein, conserved site RAM_22475 IPR000425 Major intrinsic protein RAM_22475 IPR023271 Aquaporin-like RAM_22480 IPR018485 Carbohydrate kinase, FGGY, C-terminal RAM_22480 IPR018483 Carbohydrate kinase, FGGY, conserved site RAM_22480 IPR000577 Carbohydrate kinase, FGGY RAM_22480 IPR018484 Carbohydrate kinase, FGGY, N-terminal RAM_22480 IPR005999 Glycerol kinase RAM_22485 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_22485 IPR006076 FAD dependent oxidoreductase RAM_22485 IPR031656 Alpha-glycerophosphate oxidase, C-terminal RAM_22485 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase RAM_22485 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily RAM_22495 IPR001518 Argininosuccinate synthase RAM_22495 IPR023437 Argininosuccinate synthase, type 2 subfamily RAM_22495 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body RAM_22495 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail RAM_22495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_22495 IPR018223 Argininosuccinate synthase, conserved site RAM_22500 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_22500 IPR020843 Polyketide synthase, enoylreductase domain RAM_22500 IPR014043 Acyl transferase RAM_22500 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_22500 IPR036736 ACP-like superfamily RAM_22500 IPR036291 NAD(P)-binding domain superfamily RAM_22500 IPR013968 Polyketide synthase, ketoreductase domain RAM_22500 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_22500 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_22500 IPR015083 Polyketide synthase, docking domain RAM_22500 IPR009081 Phosphopantetheine binding ACP domain RAM_22500 IPR020807 Polyketide synthase, dehydratase domain RAM_22500 IPR001227 Acyl transferase domain superfamily RAM_22500 IPR013154 Alcohol dehydrogenase, N-terminal RAM_22500 IPR006162 Phosphopantetheine attachment site RAM_22500 IPR016039 Thiolase-like RAM_22500 IPR015357 Erythronolide synthase, docking RAM_22500 IPR036347 Erythronolide synthase, docking domain superfamily RAM_22500 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_22500 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_22500 IPR018201 Beta-ketoacyl synthase, active site RAM_22500 IPR011032 GroES-like superfamily RAM_22500 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_22500 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_22535 IPR001466 Beta-lactamase-related RAM_22535 IPR012338 Beta-lactamase/transpeptidase-like RAM_22540 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RAM_22540 IPR007173 D-arabinono-1,4-lactone oxidase RAM_22540 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_22540 IPR016167 FAD-binding, type PCMH, subdomain 1 RAM_22540 IPR036318 FAD-binding, type PCMH-like superfamily RAM_22540 IPR010031 L-gulonolactone/D-arabinono-1,4-lactone oxidase RAM_22540 IPR006094 FAD linked oxidase, N-terminal RAM_22540 IPR016166 FAD-binding domain, PCMH-type RAM_22545 IPR028082 Periplasmic binding protein-like I RAM_22545 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_22545 IPR000843 LacI-type HTH domain RAM_22555 IPR006059 Bacterial extracellular solute-binding protein RAM_22560 IPR035906 MetI-like superfamily RAM_22560 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_22565 IPR035906 MetI-like superfamily RAM_22565 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_22575 IPR000683 Oxidoreductase, N-terminal RAM_22575 IPR036291 NAD(P)-binding domain superfamily RAM_22575 IPR004104 Oxidoreductase, C-terminal RAM_22580 IPR004104 Oxidoreductase, C-terminal RAM_22580 IPR036291 NAD(P)-binding domain superfamily RAM_22580 IPR000683 Oxidoreductase, N-terminal RAM_22590 IPR002022 Pectate lyase RAM_22590 IPR012334 Pectin lyase fold RAM_22590 IPR011050 Pectin lyase fold/virulence factor RAM_22595 IPR004898 Pectate lyase PlyH/PlyE-like RAM_22595 IPR011050 Pectin lyase fold/virulence factor RAM_22595 IPR012334 Pectin lyase fold RAM_22600 IPR000070 Pectinesterase, catalytic RAM_22600 IPR033131 Pectinesterase, Asp active site RAM_22600 IPR011050 Pectin lyase fold/virulence factor RAM_22600 IPR012334 Pectin lyase fold RAM_22605 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase RAM_22605 IPR006710 Glycoside hydrolase, family 43 RAM_22605 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RAM_22620 IPR013026 Tetratricopeptide repeat-containing domain RAM_22620 IPR005158 Bacterial transcriptional activator domain RAM_22620 IPR019734 Tetratricopeptide repeat RAM_22620 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_22620 IPR016032 Signal transduction response regulator, C-terminal effector RAM_22620 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_22620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_22620 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_22620 IPR002182 NB-ARC RAM_22635 IPR006015 Universal stress protein A family RAM_22635 IPR006016 UspA RAM_22640 IPR014032 Peptidase A24A, prepilin type IV, bacterial RAM_22640 IPR000045 Prepilin type IV endopeptidase, peptidase domain RAM_22640 IPR010627 Peptidase A24A, N-terminal RAM_22660 IPR001992 Type II secretion system conserved site RAM_22660 IPR018076 Type II secretion system F domain RAM_22660 IPR042094 Type II secretion system F domain superfamily RAM_22660 IPR003004 GspF/PilC family RAM_22665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_22665 IPR003593 AAA+ ATPase domain RAM_22665 IPR001482 Type II/IV secretion system protein RAM_22665 IPR037257 General secretory system II, protein E, N-terminal superfamily RAM_22665 IPR013369 Type II secretion system GspE RAM_22670 IPR001482 Type II/IV secretion system protein RAM_22670 IPR006321 Pilus retraction protein PilT RAM_22670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_22670 IPR003593 AAA+ ATPase domain RAM_22675 IPR012902 Prokaryotic N-terminal methylation site RAM_22675 IPR000983 Bacterial general secretion pathway protein G-type pilin RAM_22675 IPR010054 General secretion pathway protein G RAM_22675 IPR013545 Type II secretion system protein G RAM_22700 IPR036291 NAD(P)-binding domain superfamily RAM_22700 IPR010099 Epimerase family protein SDR39U1 RAM_22700 IPR001509 NAD-dependent epimerase/dehydratase RAM_22700 IPR013549 Domain of unknown function DUF1731 RAM_22710 IPR013094 Alpha/beta hydrolase fold-3 RAM_22710 IPR029058 Alpha/Beta hydrolase fold RAM_22715 IPR013149 Alcohol dehydrogenase, C-terminal RAM_22715 IPR011032 GroES-like superfamily RAM_22715 IPR036291 NAD(P)-binding domain superfamily RAM_22715 IPR020843 Polyketide synthase, enoylreductase domain RAM_22715 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_22715 IPR013154 Alcohol dehydrogenase, N-terminal RAM_22730 IPR005836 ADP-glucose pyrophosphorylase, conserved site RAM_22730 IPR011004 Trimeric LpxA-like superfamily RAM_22730 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial RAM_22730 IPR005835 Nucleotidyl transferase domain RAM_22730 IPR029044 Nucleotide-diphospho-sugar transferases RAM_22730 IPR011831 Glucose-1-phosphate adenylyltransferase RAM_22735 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_22735 IPR011875 Alpha-maltose-1-phosphate synthase RAM_22735 IPR001296 Glycosyl transferase, family 1 RAM_22745 IPR036513 STAS domain superfamily RAM_22745 IPR003658 Anti-sigma factor antagonist RAM_22745 IPR002645 STAS domain RAM_22745 IPR014237 Anti-sigma F factor antagonist RAM_22760 IPR013783 Immunoglobulin-like fold RAM_22760 IPR005084 Carbohydrate binding module family 6 RAM_22760 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_22760 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_22760 IPR008979 Galactose-binding-like domain superfamily RAM_22760 IPR017853 Glycoside hydrolase superfamily RAM_22760 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_22760 IPR028829 Exo-beta-D-glucosaminidase RAM_22760 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain RAM_22770 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_22770 IPR025736 PucR C-terminal helix-turn-helix domain RAM_22770 IPR041522 CdaR, GGDEF-like domain RAM_22775 IPR035649 EFG, domain V RAM_22775 IPR000640 Elongation factor EFG, domain V-like RAM_22775 IPR009022 Elongation factor G, domain III RAM_22775 IPR041095 Elongation Factor G, domain II RAM_22775 IPR005517 Translation elongation factor EFG/EF2, domain IV RAM_22775 IPR004540 Translation elongation factor EFG/EF2 RAM_22775 IPR009000 Translation protein, beta-barrel domain superfamily RAM_22775 IPR000795 Transcription factor, GTP-binding domain RAM_22775 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_22775 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_22775 IPR035647 EF-G domain III/V-like RAM_22775 IPR005225 Small GTP-binding protein domain RAM_22775 IPR031157 Tr-type G domain, conserved site RAM_22775 IPR004161 Translation elongation factor EFTu-like, domain 2 RAM_22775 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_22780 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_22780 IPR015424 Pyridoxal phosphate-dependent transferase RAM_22780 IPR011340 Cysteine desulfurase-related RAM_22780 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_22780 IPR000192 Aminotransferase class V domain RAM_22790 IPR018584 Glycosyltransferase family 87 RAM_22805 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_22805 IPR002938 FAD-binding domain RAM_22820 IPR036259 MFS transporter superfamily RAM_22820 IPR020846 Major facilitator superfamily domain RAM_22820 IPR011701 Major facilitator superfamily RAM_22825 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_22825 IPR036736 ACP-like superfamily RAM_22825 IPR013968 Polyketide synthase, ketoreductase domain RAM_22825 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_22825 IPR018201 Beta-ketoacyl synthase, active site RAM_22825 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_22825 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_22825 IPR014043 Acyl transferase RAM_22825 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_22825 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_22825 IPR036291 NAD(P)-binding domain superfamily RAM_22825 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_22825 IPR006162 Phosphopantetheine attachment site RAM_22825 IPR016039 Thiolase-like RAM_22825 IPR009081 Phosphopantetheine binding ACP domain RAM_22825 IPR020807 Polyketide synthase, dehydratase domain RAM_22825 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_22830 IPR042099 AMP-dependent synthetase-like superfamily RAM_22830 IPR000873 AMP-dependent synthetase/ligase RAM_22845 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_22845 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_22845 IPR036291 NAD(P)-binding domain superfamily RAM_22850 IPR004276 Glycosyltransferase family 28, N-terminal domain RAM_22850 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase RAM_22860 IPR012310 DNA ligase, ATP-dependent, central RAM_22860 IPR014146 DNA ligase D, ligase domain RAM_22860 IPR033649 LigD polymerase domain, MtLigD-type RAM_22860 IPR014144 DNA ligase D, 3'-phosphoesterase domain RAM_22860 IPR014145 DNA ligase D, polymerase domain RAM_22860 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_22860 IPR012340 Nucleic acid-binding, OB-fold RAM_22870 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RAM_22870 IPR002504 NAD kinase RAM_22870 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RAM_22870 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal RAM_22875 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_22875 IPR020946 Flavin monooxygenase-like RAM_22880 IPR036291 NAD(P)-binding domain superfamily RAM_22880 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_22880 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_22885 IPR000073 Alpha/beta hydrolase fold-1 RAM_22885 IPR029058 Alpha/Beta hydrolase fold RAM_22885 IPR000639 Epoxide hydrolase-like RAM_22890 IPR002401 Cytochrome P450, E-class, group I RAM_22890 IPR017972 Cytochrome P450, conserved site RAM_22890 IPR001128 Cytochrome P450 RAM_22890 IPR036396 Cytochrome P450 superfamily RAM_22900 IPR016032 Signal transduction response regulator, C-terminal effector RAM_22900 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_22900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_22900 IPR013026 Tetratricopeptide repeat-containing domain RAM_22900 IPR002182 NB-ARC RAM_22900 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_22900 IPR005158 Bacterial transcriptional activator domain RAM_22900 IPR019734 Tetratricopeptide repeat RAM_22900 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_22905 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RAM_22905 IPR035895 HPr-like superfamily RAM_22905 IPR000032 Phosphocarrier protein HPr-like RAM_22910 IPR036095 PTS system IIB component-like superfamily RAM_22910 IPR013011 Phosphotransferase system, EIIB component, type 2 RAM_22910 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RAM_22910 IPR003352 Phosphotransferase system, EIIC RAM_22910 IPR013014 Phosphotransferase system, EIIC component, type 2 RAM_22910 IPR003353 Phosphotransferase system, fructose-specific IIB subunit RAM_22910 IPR006327 Phosphotransferase system, fructose IIC component RAM_22915 IPR023151 PEP-utilising enzyme, conserved site RAM_22915 IPR000121 PEP-utilising enzyme, C-terminal RAM_22915 IPR000032 Phosphocarrier protein HPr-like RAM_22915 IPR018274 PEP-utilising enzyme, active site RAM_22915 IPR006318 Phosphotransferase system, enzyme I-like RAM_22915 IPR036618 PtsI, HPr-binding domain superfamily RAM_22915 IPR008731 Phosphotransferase system, enzyme I N-terminal RAM_22915 IPR008279 PEP-utilising enzyme, mobile domain RAM_22915 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RAM_22915 IPR035895 HPr-like superfamily RAM_22915 IPR002178 PTS EIIA type-2 domain RAM_22915 IPR040442 Pyruvate kinase-like domain superfamily RAM_22915 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RAM_22915 IPR036637 Phosphohistidine domain superfamily RAM_22915 IPR016152 Phosphotransferase/anion transporter RAM_22920 IPR022463 Fructose 1-phosphate kinase RAM_22920 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_22920 IPR011611 Carbohydrate kinase PfkB RAM_22920 IPR029056 Ribokinase-like RAM_22920 IPR017583 Tagatose/fructose phosphokinase RAM_22930 IPR040442 Pyruvate kinase-like domain superfamily RAM_22930 IPR024692 Phosphotransferase system, enzyme I RAM_22930 IPR036618 PtsI, HPr-binding domain superfamily RAM_22930 IPR018274 PEP-utilising enzyme, active site RAM_22930 IPR036637 Phosphohistidine domain superfamily RAM_22930 IPR023151 PEP-utilising enzyme, conserved site RAM_22930 IPR006318 Phosphotransferase system, enzyme I-like RAM_22930 IPR000121 PEP-utilising enzyme, C-terminal RAM_22930 IPR008279 PEP-utilising enzyme, mobile domain RAM_22930 IPR008731 Phosphotransferase system, enzyme I N-terminal RAM_22930 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RAM_22935 IPR035985 Ubiquitin-activating enzyme RAM_22935 IPR000415 Nitroreductase-like RAM_22935 IPR000594 THIF-type NAD/FAD binding fold RAM_22950 IPR019800 Glycoside hydrolase, family 3, active site RAM_22950 IPR013783 Immunoglobulin-like fold RAM_22950 IPR017853 Glycoside hydrolase superfamily RAM_22950 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_22950 IPR002772 Glycoside hydrolase family 3 C-terminal domain RAM_22950 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily RAM_22950 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_22950 IPR026891 Fibronectin type III-like domain RAM_22955 IPR023588 Transcription regulator HTH, PurR RAM_22955 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_22955 IPR000843 LacI-type HTH domain RAM_22955 IPR028082 Periplasmic binding protein-like I RAM_22965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_22965 IPR035906 MetI-like superfamily RAM_22970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_22970 IPR035906 MetI-like superfamily RAM_22980 IPR023588 Transcription regulator HTH, PurR RAM_22980 IPR000843 LacI-type HTH domain RAM_22980 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_22980 IPR028082 Periplasmic binding protein-like I RAM_22985 IPR017853 Glycoside hydrolase superfamily RAM_22985 IPR001000 Glycoside hydrolase family 10 domain RAM_22985 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_22985 IPR001919 Carbohydrate-binding type-2 domain RAM_22985 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_22990 IPR001137 Glycoside hydrolase family 11 RAM_22990 IPR002509 NodB homology domain RAM_22990 IPR033123 Glycosyl hydrolases family 11 (GH11) domain RAM_22990 IPR033119 Glycoside hydrolase family 11, active site 2 RAM_22990 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RAM_22990 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_22990 IPR001919 Carbohydrate-binding type-2 domain RAM_22990 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RAM_22990 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_22990 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_22990 IPR018208 Glycoside hydrolase family 11, active site 1 RAM_22990 IPR013319 Glycoside hydrolase family 11/12 RAM_23000 IPR011129 Cold shock domain RAM_23000 IPR019844 Cold-shock (CSD) domain RAM_23000 IPR002059 Cold-shock protein, DNA-binding RAM_23000 IPR012156 Cold shock, CspA RAM_23000 IPR012340 Nucleic acid-binding, OB-fold RAM_23005 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_23005 IPR003333 Mycolic acid cyclopropane synthase RAM_23045 IPR001789 Signal transduction response regulator, receiver domain RAM_23045 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain RAM_23045 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_23045 IPR036641 HPT domain superfamily RAM_23045 IPR019247 Histidine kinase BarA, N-terminal RAM_23045 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_23045 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_23045 IPR011006 CheY-like superfamily RAM_23045 IPR005467 Histidine kinase domain RAM_23045 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_23045 IPR003594 Histidine kinase/HSP90-like ATPase RAM_23045 IPR003660 HAMP domain RAM_23055 IPR004837 Sodium/calcium exchanger membrane region RAM_23055 IPR004713 Calcium/proton exchanger RAM_23060 IPR036390 Winged helix DNA-binding domain superfamily RAM_23060 IPR005119 LysR, substrate-binding RAM_23060 IPR000847 Transcription regulator HTH, LysR RAM_23060 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_23065 IPR029061 Thiamin diphosphate-binding fold RAM_23065 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_23065 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_23065 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_23065 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_23065 IPR000399 TPP-binding enzyme, conserved site RAM_23095 IPR013856 Peptidase M4 domain RAM_23095 IPR041756 Peptidase M28, SGAP-like RAM_23095 IPR027268 Peptidase M4/M1, CTD superfamily RAM_23095 IPR007484 Peptidase M28 RAM_23095 IPR001570 Peptidase M4, C-terminal RAM_23105 IPR006101 Glycoside hydrolase, family 2 RAM_23105 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_23105 IPR040605 Glycoside hydrolase family 2, domain 5 RAM_23105 IPR008979 Galactose-binding-like domain superfamily RAM_23105 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_23105 IPR023230 Glycoside hydrolase, family 2, conserved site RAM_23105 IPR023232 Glycoside hydrolase, family 2, active site RAM_23105 IPR006103 Glycoside hydrolase family 2, catalytic domain RAM_23105 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_23105 IPR013783 Immunoglobulin-like fold RAM_23105 IPR017853 Glycoside hydrolase superfamily RAM_23110 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_23110 IPR028082 Periplasmic binding protein-like I RAM_23110 IPR023588 Transcription regulator HTH, PurR RAM_23110 IPR000843 LacI-type HTH domain RAM_23115 IPR003439 ABC transporter-like RAM_23115 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_23115 IPR015861 ABC transporter, ribose import, RbsA RAM_23115 IPR003593 AAA+ ATPase domain RAM_23115 IPR017871 ABC transporter, conserved site RAM_23120 IPR001851 ABC transporter, permease RAM_23125 IPR001851 ABC transporter, permease RAM_23135 IPR013448 L-rhamnose mutarotase RAM_23135 IPR008000 Rhamnose/fucose mutarotase RAM_23135 IPR011008 Dimeric alpha-beta barrel RAM_23145 IPR036409 Class II aldolase/adducin N-terminal domain superfamily RAM_23145 IPR036291 NAD(P)-binding domain superfamily RAM_23145 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_23145 IPR001303 Class II aldolase/adducin N-terminal RAM_23145 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase RAM_23155 IPR013449 Rhamnulokinase RAM_23155 IPR018484 Carbohydrate kinase, FGGY, N-terminal RAM_23155 IPR018485 Carbohydrate kinase, FGGY, C-terminal RAM_23155 IPR000577 Carbohydrate kinase, FGGY RAM_23160 IPR000792 Transcription regulator LuxR, C-terminal RAM_23160 IPR016032 Signal transduction response regulator, C-terminal effector RAM_23160 IPR011006 CheY-like superfamily RAM_23165 IPR003594 Histidine kinase/HSP90-like ATPase RAM_23165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_23165 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_23175 IPR028082 Periplasmic binding protein-like I RAM_23175 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_23175 IPR000843 LacI-type HTH domain RAM_23180 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain RAM_23180 IPR028829 Exo-beta-D-glucosaminidase RAM_23180 IPR008979 Galactose-binding-like domain superfamily RAM_23180 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_23180 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_23180 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_23180 IPR017853 Glycoside hydrolase superfamily RAM_23180 IPR013783 Immunoglobulin-like fold RAM_23180 IPR005084 Carbohydrate binding module family 6 RAM_23235 IPR036775 DNA polymerase, Y-family, little finger domain superfamily RAM_23235 IPR017961 DNA polymerase, Y-family, little finger domain RAM_23235 IPR022880 DNA polymerase IV RAM_23235 IPR001126 UmuC domain RAM_23240 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative RAM_23240 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp RAM_23240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_23245 IPR042254 Lsr2, DNA binding domain RAM_23245 IPR042261 Lsr2, dimerization domain RAM_23245 IPR024412 Lsr2 RAM_23255 IPR016193 Cytidine deaminase-like RAM_23255 IPR003786 Sulfur carrier protein FdhD RAM_23260 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_23260 IPR000847 Transcription regulator HTH, LysR RAM_23260 IPR005119 LysR, substrate-binding RAM_23260 IPR036390 Winged helix DNA-binding domain superfamily RAM_23265 IPR005810 Succinyl-CoA ligase, alpha subunit RAM_23265 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RAM_23265 IPR016102 Succinyl-CoA synthetase-like RAM_23265 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site RAM_23265 IPR036291 NAD(P)-binding domain superfamily RAM_23265 IPR003781 CoA-binding RAM_23265 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RAM_23270 IPR016102 Succinyl-CoA synthetase-like RAM_23270 IPR005809 Succinate--CoA synthetase, beta subunit RAM_23270 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RAM_23270 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RAM_23270 IPR011761 ATP-grasp fold RAM_23270 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RAM_23270 IPR013815 ATP-grasp fold, subdomain 1 RAM_23275 IPR029061 Thiamin diphosphate-binding fold RAM_23275 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_23275 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_23275 IPR000399 TPP-binding enzyme, conserved site RAM_23275 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_23275 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_23280 IPR003673 CoA-transferase family III RAM_23280 IPR017659 Formyl-CoA:oxalate CoA-transferase RAM_23280 IPR023606 CoA-transferase family III domain superfamily RAM_23285 IPR000182 GNAT domain RAM_23285 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RAM_23285 IPR016102 Succinyl-CoA synthetase-like RAM_23285 IPR036291 NAD(P)-binding domain superfamily RAM_23285 IPR016181 Acyl-CoA N-acyltransferase RAM_23285 IPR003781 CoA-binding RAM_23285 IPR013815 ATP-grasp fold, subdomain 1 RAM_23285 IPR011761 ATP-grasp fold RAM_23290 IPR004741 Oxalate/formate antiporter family transporter RAM_23290 IPR020846 Major facilitator superfamily domain RAM_23290 IPR036259 MFS transporter superfamily RAM_23290 IPR011701 Major facilitator superfamily RAM_23295 IPR036390 Winged helix DNA-binding domain superfamily RAM_23295 IPR000524 Transcription regulator HTH, GntR RAM_23295 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_23295 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_23295 IPR011711 GntR, C-terminal RAM_23300 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_23300 IPR036291 NAD(P)-binding domain superfamily RAM_23300 IPR013752 Ketopantoate reductase, C-terminal domain RAM_23300 IPR013332 Ketopantoate reductase, N-terminal domain RAM_23300 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_23305 IPR006657 Molybdopterin dinucleotide-binding domain RAM_23305 IPR006656 Molybdopterin oxidoreductase RAM_23305 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RAM_23305 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RAM_23305 IPR041924 Formate dehydrogenase H, N-terminal RAM_23305 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain RAM_23305 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_23305 IPR006478 Formate dehydrogenase, alpha subunit RAM_23305 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RAM_23310 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily RAM_23310 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily RAM_23310 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain RAM_23310 IPR019554 Soluble ligand binding domain RAM_23310 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain RAM_23310 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RAM_23315 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site RAM_23315 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_23315 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RAM_23315 IPR010228 NADH:ubiquinone oxidoreductase, subunit G RAM_23315 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RAM_23315 IPR006656 Molybdopterin oxidoreductase RAM_23315 IPR006657 Molybdopterin dinucleotide-binding domain RAM_23315 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_23315 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_23320 IPR026040 Hydroxypyruvate isomerase-like RAM_23320 IPR013022 Xylose isomerase-like, TIM barrel domain RAM_23320 IPR036237 Xylose isomerase-like superfamily RAM_23325 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RAM_23325 IPR006398 2-hydroxy-3-oxopropionate reductase RAM_23325 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RAM_23325 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_23325 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_23325 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RAM_23325 IPR036291 NAD(P)-binding domain superfamily RAM_23325 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RAM_23330 IPR029061 Thiamin diphosphate-binding fold RAM_23330 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_23330 IPR006397 Glyoxylate carboligase RAM_23330 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_23330 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_23330 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_23335 IPR005107 CO dehydrogenase flavoprotein, C-terminal RAM_23335 IPR016166 FAD-binding domain, PCMH-type RAM_23335 IPR036318 FAD-binding, type PCMH-like superfamily RAM_23335 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_23335 IPR002346 Molybdopterin dehydrogenase, FAD-binding RAM_23335 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily RAM_23340 IPR002888 [2Fe-2S]-binding RAM_23340 IPR036884 [2Fe-2S]-binding domain superfamily RAM_23340 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_23340 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_23340 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_23340 IPR012675 Beta-grasp domain superfamily RAM_23345 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RAM_23345 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RAM_23345 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RAM_23345 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RAM_23345 IPR017609 Xanthine dehydrogenase D subunit RAM_23350 IPR016193 Cytidine deaminase-like RAM_23350 IPR002125 Cytidine and deoxycytidylate deaminase domain RAM_23350 IPR016192 APOBEC/CMP deaminase, zinc-binding RAM_23355 IPR006043 Xanthine/uracil/vitamin C permease RAM_23355 IPR026033 Azaguanine-like transporters RAM_23365 IPR036129 Glycerate kinase superfamily RAM_23365 IPR004381 Glycerate kinase RAM_23365 IPR018197 Glycerate kinase, restriction-enzyme-like fold RAM_23365 IPR018193 Glycerate kinase, flavodoxin-like fold RAM_23375 IPR008928 Six-hairpin glycosidase superfamily RAM_23375 IPR012341 Six-hairpin glycosidase-like superfamily RAM_23375 IPR000165 Glucoamylase RAM_23375 IPR011013 Galactose mutarotase-like domain superfamily RAM_23375 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_23375 IPR011613 GH15-like domain RAM_23375 IPR006425 Glucoamylase, bacterial RAM_23375 IPR015220 Glucodextranase, N-terminal RAM_23390 IPR000544 Octanoyltransferase RAM_23390 IPR000086 NUDIX hydrolase domain RAM_23390 IPR020084 NUDIX hydrolase, conserved site RAM_23390 IPR015797 NUDIX hydrolase-like domain superfamily RAM_23390 IPR020605 Octanoyltransferase, conserved site RAM_23390 IPR020476 NUDIX hydrolase RAM_23390 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RAM_23395 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_23395 IPR002938 FAD-binding domain RAM_23400 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_23400 IPR009057 Homeobox-like domain superfamily RAM_23400 IPR001647 DNA-binding HTH domain, TetR-type RAM_23400 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_23405 IPR032312 Beta-galactosidase, domain 4 RAM_23405 IPR013783 Immunoglobulin-like fold RAM_23405 IPR017853 Glycoside hydrolase superfamily RAM_23405 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_23405 IPR023230 Glycoside hydrolase, family 2, conserved site RAM_23405 IPR006103 Glycoside hydrolase family 2, catalytic domain RAM_23405 IPR023232 Glycoside hydrolase, family 2, active site RAM_23405 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase RAM_23405 IPR006101 Glycoside hydrolase, family 2 RAM_23405 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_23405 IPR004199 Beta galactosidase small chain/ domain 5 RAM_23405 IPR008979 Galactose-binding-like domain superfamily RAM_23405 IPR011013 Galactose mutarotase-like domain superfamily RAM_23405 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_23410 IPR028082 Periplasmic binding protein-like I RAM_23410 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_23410 IPR000843 LacI-type HTH domain RAM_23410 IPR006377 Catabolite control protein A RAM_23415 IPR004840 Amino acid permease, conserved site RAM_23415 IPR004841 Amino acid permease/ SLC12A domain RAM_23420 IPR015868 Glutaminase RAM_23420 IPR012338 Beta-lactamase/transpeptidase-like RAM_23435 IPR026260 Threonine synthase, bacterial/archaeal RAM_23435 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_23435 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_23435 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RAM_23435 IPR004450 Threonine synthase-like RAM_23440 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_23440 IPR009081 Phosphopantetheine binding ACP domain RAM_23440 IPR014043 Acyl transferase RAM_23440 IPR036736 ACP-like superfamily RAM_23440 IPR016039 Thiolase-like RAM_23440 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_23440 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_23440 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_23440 IPR036291 NAD(P)-binding domain superfamily RAM_23440 IPR018201 Beta-ketoacyl synthase, active site RAM_23440 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_23440 IPR013968 Polyketide synthase, ketoreductase domain RAM_23440 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_23440 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_23445 IPR006162 Phosphopantetheine attachment site RAM_23445 IPR016039 Thiolase-like RAM_23445 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_23445 IPR013968 Polyketide synthase, ketoreductase domain RAM_23445 IPR020843 Polyketide synthase, enoylreductase domain RAM_23445 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_23445 IPR020807 Polyketide synthase, dehydratase domain RAM_23445 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_23445 IPR036291 NAD(P)-binding domain superfamily RAM_23445 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_23445 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_23445 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_23445 IPR011032 GroES-like superfamily RAM_23445 IPR013154 Alcohol dehydrogenase, N-terminal RAM_23445 IPR013149 Alcohol dehydrogenase, C-terminal RAM_23445 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_23445 IPR014043 Acyl transferase RAM_23445 IPR036736 ACP-like superfamily RAM_23445 IPR001227 Acyl transferase domain superfamily RAM_23445 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_23445 IPR018201 Beta-ketoacyl synthase, active site RAM_23445 IPR009081 Phosphopantetheine binding ACP domain RAM_23450 IPR009081 Phosphopantetheine binding ACP domain RAM_23450 IPR003231 Acyl carrier protein (ACP) RAM_23450 IPR036736 ACP-like superfamily RAM_23455 IPR000073 Alpha/beta hydrolase fold-1 RAM_23455 IPR000639 Epoxide hydrolase-like RAM_23455 IPR029058 Alpha/Beta hydrolase fold RAM_23465 IPR036291 NAD(P)-binding domain superfamily RAM_23465 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_23465 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_23470 IPR005829 Sugar transporter, conserved site RAM_23470 IPR036390 Winged helix DNA-binding domain superfamily RAM_23470 IPR020846 Major facilitator superfamily domain RAM_23470 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_23470 IPR011701 Major facilitator superfamily RAM_23470 IPR036259 MFS transporter superfamily RAM_23470 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RAM_23480 IPR014146 DNA ligase D, ligase domain RAM_23480 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_23480 IPR012310 DNA ligase, ATP-dependent, central RAM_23480 IPR033649 LigD polymerase domain, MtLigD-type RAM_23480 IPR014145 DNA ligase D, polymerase domain RAM_23480 IPR014144 DNA ligase D, 3'-phosphoesterase domain RAM_23480 IPR012340 Nucleic acid-binding, OB-fold RAM_23485 IPR020615 Thiolase, acyl-enzyme intermediate active site RAM_23485 IPR020610 Thiolase, active site RAM_23485 IPR020613 Thiolase, conserved site RAM_23485 IPR020616 Thiolase, N-terminal RAM_23485 IPR016039 Thiolase-like RAM_23485 IPR020617 Thiolase, C-terminal RAM_23485 IPR002155 Thiolase RAM_23485 IPR012805 Acetyl-CoA C-acyltransferase FadA RAM_23490 IPR002577 Helix-turn-helix, HxlR type RAM_23490 IPR036390 Winged helix DNA-binding domain superfamily RAM_23490 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_23490 IPR011991 ArsR-like helix-turn-helix domain RAM_23500 IPR003610 Carbohydrate-binding module family 5/12 RAM_23500 IPR036573 Carbohydrate-binding module superfamily 5/12 RAM_23500 IPR011583 Chitinase II RAM_23500 IPR029070 Chitinase insertion domain superfamily RAM_23500 IPR003961 Fibronectin type III RAM_23500 IPR036116 Fibronectin type III superfamily RAM_23500 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_23500 IPR001579 Glycoside hydrolase, chitinase active site RAM_23500 IPR017853 Glycoside hydrolase superfamily RAM_23500 IPR013783 Immunoglobulin-like fold RAM_23505 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain RAM_23505 IPR036291 NAD(P)-binding domain superfamily RAM_23505 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RAM_23520 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain RAM_23520 IPR036390 Winged helix DNA-binding domain superfamily RAM_23520 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_23520 IPR000847 Transcription regulator HTH, LysR RAM_23520 IPR005119 LysR, substrate-binding RAM_23535 IPR003673 CoA-transferase family III RAM_23535 IPR023606 CoA-transferase family III domain superfamily RAM_23540 IPR003673 CoA-transferase family III RAM_23540 IPR023606 CoA-transferase family III domain superfamily RAM_23545 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_23545 IPR000843 LacI-type HTH domain RAM_23545 IPR006377 Catabolite control protein A RAM_23545 IPR028082 Periplasmic binding protein-like I RAM_23555 IPR011650 Peptidase M20, dimerisation domain RAM_23555 IPR036264 Bacterial exopeptidase dimerisation domain RAM_23555 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RAM_23555 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RAM_23555 IPR002933 Peptidase M20 RAM_23560 IPR029058 Alpha/Beta hydrolase fold RAM_23560 IPR000073 Alpha/beta hydrolase fold-1 RAM_23560 IPR019913 Pyrimidine utilisation protein RutD RAM_23595 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_23595 IPR023210 NADP-dependent oxidoreductase domain RAM_23600 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c RAM_23600 IPR011251 Luciferase-like domain RAM_23600 IPR036661 Luciferase-like domain superfamily RAM_23605 IPR003824 Undecaprenyl-diphosphatase UppP RAM_23615 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 RAM_23615 IPR001567 Peptidase M3A/M3B catalytic domain RAM_23620 IPR033135 ClpP, histidine active site RAM_23620 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RAM_23620 IPR029045 ClpP/crotonase-like domain superfamily RAM_23620 IPR001907 ATP-dependent Clp protease proteolytic subunit RAM_23625 IPR001557 L-lactate/malate dehydrogenase RAM_23625 IPR022383 Lactate/malate dehydrogenase, C-terminal RAM_23625 IPR001236 Lactate/malate dehydrogenase, N-terminal RAM_23625 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RAM_23625 IPR001252 Malate dehydrogenase, active site RAM_23625 IPR036291 NAD(P)-binding domain superfamily RAM_23625 IPR010945 Malate dehydrogenase, type 2 RAM_23660 IPR008928 Six-hairpin glycosidase superfamily RAM_23660 IPR005887 Alpha-1,2-mannosidase, putative RAM_23660 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_23660 IPR041371 Glycosyl hydrolase family 92 N-terminal domain RAM_23660 IPR012939 Glycosyl hydrolase family 92 RAM_23665 IPR029058 Alpha/Beta hydrolase fold RAM_23665 IPR011118 Tannase/feruloyl esterase RAM_23690 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RAM_23690 IPR011650 Peptidase M20, dimerisation domain RAM_23690 IPR036264 Bacterial exopeptidase dimerisation domain RAM_23690 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RAM_23690 IPR002933 Peptidase M20 RAM_23700 IPR000914 Solute-binding protein family 5 domain RAM_23700 IPR023765 Solute-binding protein family 5, conserved site RAM_23700 IPR039424 Solute-binding protein family 5 RAM_23700 IPR030678 Peptide/nickel binding protein, MppA-type RAM_23705 IPR035906 MetI-like superfamily RAM_23705 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_23715 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_23715 IPR017871 ABC transporter, conserved site RAM_23715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_23715 IPR003439 ABC transporter-like RAM_23715 IPR003593 AAA+ ATPase domain RAM_23720 IPR017822 Carotene biosynthesis-associated membrane protein, type-1 RAM_23730 IPR003507 Peptidase family S66 RAM_23730 IPR040921 LD-carboxypeptidase, C-terminal RAM_23730 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal RAM_23730 IPR029062 Class I glutamine amidotransferase-like RAM_23730 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily RAM_23730 IPR040449 LD-carboxypeptidase, N-terminal RAM_23735 IPR029058 Alpha/Beta hydrolase fold RAM_23735 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RAM_23735 IPR011042 Six-bladed beta-propeller, TolB-like RAM_23735 IPR011659 WD40-like Beta Propeller RAM_23770 IPR001972 Stomatin family RAM_23770 IPR036013 Band 7/SPFH domain superfamily RAM_23770 IPR001107 Band 7 domain RAM_23770 IPR018080 Band 7/stomatin-like, conserved site RAM_23795 IPR005828 Major facilitator, sugar transporter-like RAM_23795 IPR011701 Major facilitator superfamily RAM_23795 IPR020846 Major facilitator superfamily domain RAM_23795 IPR005829 Sugar transporter, conserved site RAM_23795 IPR004736 MFS transporter, metabolite:H symporter RAM_23795 IPR036259 MFS transporter superfamily RAM_23805 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_23805 IPR002938 FAD-binding domain RAM_23815 IPR011991 ArsR-like helix-turn-helix domain RAM_23815 IPR001845 HTH ArsR-type DNA-binding domain RAM_23815 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_23815 IPR036390 Winged helix DNA-binding domain superfamily RAM_23825 IPR009057 Homeobox-like domain superfamily RAM_23825 IPR001647 DNA-binding HTH domain, TetR-type RAM_23870 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_23870 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_23870 IPR013325 RNA polymerase sigma factor, region 2 RAM_23870 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_23870 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_23870 IPR007627 RNA polymerase sigma-70 region 2 RAM_23870 IPR014284 RNA polymerase sigma-70 like domain RAM_23900 IPR009057 Homeobox-like domain superfamily RAM_23900 IPR001647 DNA-binding HTH domain, TetR-type RAM_23900 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_23905 IPR011051 RmlC-like cupin domain superfamily RAM_23905 IPR009057 Homeobox-like domain superfamily RAM_23905 IPR032783 AraC-type transcription regulator, ligand-binding domain RAM_23905 IPR014710 RmlC-like jelly roll fold RAM_23905 IPR018060 DNA binding HTH domain, AraC-type RAM_23905 IPR020449 Transcription regulator HTH, AraC- type RAM_23935 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_23935 IPR014284 RNA polymerase sigma-70 like domain RAM_23935 IPR013325 RNA polymerase sigma factor, region 2 RAM_23935 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_23935 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_23935 IPR007627 RNA polymerase sigma-70 region 2 RAM_23935 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_23945 IPR036396 Cytochrome P450 superfamily RAM_23945 IPR017972 Cytochrome P450, conserved site RAM_23945 IPR002397 Cytochrome P450, B-class RAM_23945 IPR001128 Cytochrome P450 RAM_23955 IPR025302 Domain of unknown function DUF4162 RAM_23955 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_23955 IPR017871 ABC transporter, conserved site RAM_23955 IPR003439 ABC transporter-like RAM_23955 IPR003593 AAA+ ATPase domain RAM_23955 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_23965 IPR000330 SNF2-related, N-terminal domain RAM_23965 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_23965 IPR001650 Helicase, C-terminal RAM_23965 IPR022138 Helicase SWF/SNF-related RAM_23965 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_23965 IPR038718 SNF2-like, N-terminal domain superfamily RAM_23975 IPR002938 FAD-binding domain RAM_23975 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_23980 IPR009057 Homeobox-like domain superfamily RAM_23980 IPR001647 DNA-binding HTH domain, TetR-type RAM_23980 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_23990 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_23990 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_23990 IPR041504 Adaptive response protein AidB, N-terminal RAM_23990 IPR034184 Putative acyl-CoA dehydrogenase AidB RAM_23990 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_23990 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_23990 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_23995 IPR041642 HTH-type transcriptional repressor KstR, C-terminal RAM_23995 IPR001647 DNA-binding HTH domain, TetR-type RAM_23995 IPR009057 Homeobox-like domain superfamily RAM_24010 IPR013096 Cupin 2, conserved barrel RAM_24010 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_24010 IPR001387 Cro/C1-type helix-turn-helix domain RAM_24010 IPR011051 RmlC-like cupin domain superfamily RAM_24010 IPR014710 RmlC-like jelly roll fold RAM_24015 IPR016181 Acyl-CoA N-acyltransferase RAM_24015 IPR000182 GNAT domain RAM_24025 IPR036390 Winged helix DNA-binding domain superfamily RAM_24025 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24025 IPR001845 HTH ArsR-type DNA-binding domain RAM_24025 IPR011991 ArsR-like helix-turn-helix domain RAM_24035 IPR004107 Integrase, SAM-like, N-terminal RAM_24035 IPR010998 Integrase/recombinase, N-terminal RAM_24035 IPR011010 DNA breaking-rejoining enzyme, catalytic core RAM_24035 IPR013762 Integrase-like, catalytic domain superfamily RAM_24035 IPR002104 Integrase, catalytic domain RAM_24035 IPR023009 Tyrosine recombinase XerC/XerD RAM_24035 IPR011931 Tyrosine recombinase XerC RAM_24060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_24060 IPR001267 Thymidine kinase RAM_24065 IPR038638 RbpA superfamily RAM_24065 IPR025182 RNA polymerase-binding protein RbpA RAM_24070 IPR000086 NUDIX hydrolase domain RAM_24070 IPR004385 Nucleoside diphosphate pyrophosphatase RAM_24070 IPR015797 NUDIX hydrolase-like domain superfamily RAM_24080 IPR017810 Mycothiol biosynthesis protein, MshB RAM_24080 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RAM_24080 IPR024078 Putative deacetylase LmbE-like domain superfamily RAM_24085 IPR039528 DPM1-like RAM_24085 IPR029044 Nucleotide-diphospho-sugar transferases RAM_24085 IPR001173 Glycosyltransferase 2-like RAM_24090 IPR036526 Carbon-nitrogen hydrolase superfamily RAM_24090 IPR003010 Carbon-nitrogen hydrolase RAM_24090 IPR029044 Nucleotide-diphospho-sugar transferases RAM_24090 IPR004563 Apolipoprotein N-acyltransferase RAM_24090 IPR039528 DPM1-like RAM_24090 IPR001173 Glycosyltransferase 2-like RAM_24095 IPR002195 Dihydroorotase, conserved site RAM_24095 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_24095 IPR006680 Amidohydrolase-related RAM_24095 IPR032466 Metal-dependent hydrolase RAM_24095 IPR004722 Dihydroorotase RAM_24100 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase RAM_24100 IPR025895 Lysine-2,3-aminomutase, C-terminal domain RAM_24100 IPR022459 Lysine-2,3-aminomutase RAM_24100 IPR007197 Radical SAM RAM_24100 IPR013785 Aldolase-type TIM barrel RAM_24120 IPR020449 Transcription regulator HTH, AraC- type RAM_24120 IPR029062 Class I glutamine amidotransferase-like RAM_24120 IPR018060 DNA binding HTH domain, AraC-type RAM_24120 IPR009057 Homeobox-like domain superfamily RAM_24120 IPR002818 DJ-1/PfpI RAM_24120 IPR018062 HTH domain AraC-type, conserved site RAM_24125 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24125 IPR002577 Helix-turn-helix, HxlR type RAM_24125 IPR036390 Winged helix DNA-binding domain superfamily RAM_24145 IPR005158 Bacterial transcriptional activator domain RAM_24145 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24145 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_24145 IPR002182 NB-ARC RAM_24145 IPR019734 Tetratricopeptide repeat RAM_24145 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_24145 IPR016032 Signal transduction response regulator, C-terminal effector RAM_24145 IPR013026 Tetratricopeptide repeat-containing domain RAM_24145 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_24155 IPR017146 Type 2 lantibiotic biosynthesis protein LanM RAM_24155 IPR012341 Six-hairpin glycosidase-like superfamily RAM_24155 IPR007822 Lanthionine synthetase C-like RAM_24155 IPR025410 Lantibiotic biosynthesis protein, dehydration domain RAM_24165 IPR016032 Signal transduction response regulator, C-terminal effector RAM_24165 IPR005158 Bacterial transcriptional activator domain RAM_24165 IPR008984 SMAD/FHA domain superfamily RAM_24165 IPR000253 Forkhead-associated (FHA) domain RAM_24165 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24165 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_24165 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_24170 IPR000836 Phosphoribosyltransferase domain RAM_24170 IPR017932 Glutamine amidotransferase type 2 domain RAM_24170 IPR035584 Amidophosphoribosyltransferase, N-terminal RAM_24170 IPR005854 Amidophosphoribosyltransferase RAM_24170 IPR029057 Phosphoribosyltransferase-like RAM_24170 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_24180 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily RAM_24180 IPR006396 Glutamate mutase epsilon subunit RAM_24180 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic RAM_24185 IPR004522 Asparagine-tRNA ligase RAM_24185 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_24185 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RAM_24185 IPR012340 Nucleic acid-binding, OB-fold RAM_24185 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RAM_24185 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RAM_24190 IPR002932 Glutamate synthase domain RAM_24190 IPR024188 Glutamate synthase large subunit-like protein RAM_24190 IPR013785 Aldolase-type TIM barrel RAM_24195 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_24195 IPR009081 Phosphopantetheine binding ACP domain RAM_24195 IPR006162 Phosphopantetheine attachment site RAM_24195 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_24195 IPR001242 Condensation domain RAM_24195 IPR042099 AMP-dependent synthetase-like superfamily RAM_24195 IPR025110 AMP-binding enzyme, C-terminal domain RAM_24195 IPR020845 AMP-binding, conserved site RAM_24195 IPR036736 ACP-like superfamily RAM_24195 IPR010071 Amino acid adenylation domain RAM_24195 IPR000873 AMP-dependent synthetase/ligase RAM_24195 IPR010060 Non-ribosomal peptide synthase RAM_24205 IPR036038 Aminotransferase-like, PLP-dependent enzymes RAM_24205 IPR018300 Aminotransferase, class IV, conserved site RAM_24205 IPR005786 Branched-chain amino acid aminotransferase II RAM_24205 IPR033939 Branched-chain aminotransferase RAM_24205 IPR001544 Aminotransferase class IV RAM_24215 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_24215 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_24215 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_24215 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_24215 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_24215 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_24215 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_24220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_24220 IPR016032 Signal transduction response regulator, C-terminal effector RAM_24220 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_24220 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24220 IPR000792 Transcription regulator LuxR, C-terminal RAM_24225 IPR023603 Threonine aldolase RAM_24225 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_24225 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_24225 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase RAM_24225 IPR015424 Pyridoxal phosphate-dependent transferase RAM_24230 IPR011761 ATP-grasp fold RAM_24230 IPR008948 L-Aspartase-like RAM_24230 IPR022761 Fumarate lyase, N-terminal RAM_24230 IPR009049 Argininosuccinate lyase RAM_24230 IPR003806 ATP-grasp fold, PylC-type RAM_24230 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RAM_24230 IPR024083 Fumarase/histidase, N-terminal RAM_24230 IPR000362 Fumarate lyase family RAM_24235 IPR000362 Fumarate lyase family RAM_24235 IPR022761 Fumarate lyase, N-terminal RAM_24235 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RAM_24235 IPR008948 L-Aspartase-like RAM_24235 IPR003806 ATP-grasp fold, PylC-type RAM_24235 IPR011761 ATP-grasp fold RAM_24235 IPR009049 Argininosuccinate lyase RAM_24235 IPR024083 Fumarase/histidase, N-terminal RAM_24240 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_24240 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_24240 IPR005857 Cystathionine beta-synthase RAM_24240 IPR000644 CBS domain RAM_24245 IPR029058 Alpha/Beta hydrolase fold RAM_24245 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS RAM_24245 IPR001031 Thioesterase RAM_24255 IPR036291 NAD(P)-binding domain superfamily RAM_24255 IPR022694 3-hydroxyacyl-CoA dehydrogenase RAM_24255 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_24255 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RAM_24255 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_24255 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_24255 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_24260 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_24260 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_24260 IPR009081 Phosphopantetheine binding ACP domain RAM_24260 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_24260 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_24260 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_24260 IPR001242 Condensation domain RAM_24260 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_24260 IPR014043 Acyl transferase RAM_24260 IPR018201 Beta-ketoacyl synthase, active site RAM_24260 IPR016039 Thiolase-like RAM_24260 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_24260 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_24260 IPR001227 Acyl transferase domain superfamily RAM_24260 IPR036736 ACP-like superfamily RAM_24265 IPR006162 Phosphopantetheine attachment site RAM_24265 IPR010071 Amino acid adenylation domain RAM_24265 IPR036736 ACP-like superfamily RAM_24265 IPR025110 AMP-binding enzyme, C-terminal domain RAM_24265 IPR010060 Non-ribosomal peptide synthase RAM_24265 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_24265 IPR042099 AMP-dependent synthetase-like superfamily RAM_24265 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_24265 IPR001242 Condensation domain RAM_24265 IPR009081 Phosphopantetheine binding ACP domain RAM_24265 IPR020845 AMP-binding, conserved site RAM_24265 IPR000873 AMP-dependent synthetase/ligase RAM_24270 IPR037407 MbtH-like protein RAM_24270 IPR005153 MbtH-like domain RAM_24270 IPR038020 MbtH-like domain superfamily RAM_24275 IPR025110 AMP-binding enzyme, C-terminal domain RAM_24275 IPR010080 Thioester reductase-like domain RAM_24275 IPR042099 AMP-dependent synthetase-like superfamily RAM_24275 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_24275 IPR006162 Phosphopantetheine attachment site RAM_24275 IPR009081 Phosphopantetheine binding ACP domain RAM_24275 IPR036736 ACP-like superfamily RAM_24275 IPR010071 Amino acid adenylation domain RAM_24275 IPR010060 Non-ribosomal peptide synthase RAM_24275 IPR001242 Condensation domain RAM_24275 IPR013120 Male sterility, NAD-binding RAM_24275 IPR036291 NAD(P)-binding domain superfamily RAM_24275 IPR020845 AMP-binding, conserved site RAM_24275 IPR000873 AMP-dependent synthetase/ligase RAM_24275 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_24280 IPR042099 AMP-dependent synthetase-like superfamily RAM_24280 IPR010071 Amino acid adenylation domain RAM_24280 IPR036736 ACP-like superfamily RAM_24280 IPR025110 AMP-binding enzyme, C-terminal domain RAM_24280 IPR020845 AMP-binding, conserved site RAM_24280 IPR000873 AMP-dependent synthetase/ligase RAM_24280 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_24280 IPR029058 Alpha/Beta hydrolase fold RAM_24280 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_24280 IPR020802 Polyketide synthase, thioesterase domain RAM_24280 IPR009081 Phosphopantetheine binding ACP domain RAM_24280 IPR001031 Thioesterase RAM_24280 IPR001242 Condensation domain RAM_24295 IPR036264 Bacterial exopeptidase dimerisation domain RAM_24295 IPR011650 Peptidase M20, dimerisation domain RAM_24295 IPR002933 Peptidase M20 RAM_24295 IPR010158 Amidase, carbamoylase-type RAM_24305 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_24305 IPR004839 Aminotransferase, class I/classII RAM_24305 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_24305 IPR015424 Pyridoxal phosphate-dependent transferase RAM_24310 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24310 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_24310 IPR016032 Signal transduction response regulator, C-terminal effector RAM_24310 IPR000792 Transcription regulator LuxR, C-terminal RAM_24310 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_24315 IPR036390 Winged helix DNA-binding domain superfamily RAM_24315 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24315 IPR000847 Transcription regulator HTH, LysR RAM_24315 IPR037416 Nodulation protein D, PBP2 RAM_24315 IPR005119 LysR, substrate-binding RAM_24320 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_24320 IPR002938 FAD-binding domain RAM_24325 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain RAM_24325 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal RAM_24325 IPR008979 Galactose-binding-like domain superfamily RAM_24325 IPR029058 Alpha/Beta hydrolase fold RAM_24325 IPR005674 CocE/Serine esterase RAM_24365 IPR036849 Enolase-like, C-terminal domain superfamily RAM_24365 IPR034382 3,6-anhydro-alpha-L-galactonate cycloisomerase RAM_24365 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_24365 IPR029017 Enolase-like, N-terminal RAM_24365 IPR029065 Enolase C-terminal domain-like RAM_24365 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_24370 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24370 IPR011711 GntR, C-terminal RAM_24370 IPR000524 Transcription regulator HTH, GntR RAM_24370 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_24370 IPR036390 Winged helix DNA-binding domain superfamily RAM_24375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_24375 IPR035906 MetI-like superfamily RAM_24380 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_24380 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like RAM_24380 IPR035906 MetI-like superfamily RAM_24390 IPR025161 Putative transposase IS4/IS5 family RAM_24400 IPR038020 MbtH-like domain superfamily RAM_24400 IPR005153 MbtH-like domain RAM_24400 IPR037407 MbtH-like protein RAM_24405 IPR036736 ACP-like superfamily RAM_24405 IPR029058 Alpha/Beta hydrolase fold RAM_24405 IPR025110 AMP-binding enzyme, C-terminal domain RAM_24405 IPR001031 Thioesterase RAM_24405 IPR010071 Amino acid adenylation domain RAM_24405 IPR000873 AMP-dependent synthetase/ligase RAM_24405 IPR020845 AMP-binding, conserved site RAM_24405 IPR042099 AMP-dependent synthetase-like superfamily RAM_24405 IPR006162 Phosphopantetheine attachment site RAM_24405 IPR009081 Phosphopantetheine binding ACP domain RAM_24405 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_24405 IPR001242 Condensation domain RAM_24405 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_24410 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RAM_24410 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA RAM_24410 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_24410 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_24415 IPR036291 NAD(P)-binding domain superfamily RAM_24415 IPR003462 Ornithine cyclodeaminase/mu-crystallin RAM_24415 IPR023401 Ornithine cyclodeaminase, N-terminal RAM_24420 IPR036724 Cobalamin-binding domain superfamily RAM_24420 IPR006158 Cobalamin (vitamin B12)-binding domain RAM_24420 IPR006159 Methylmalonyl-CoA mutase, C-terminal RAM_24420 IPR006394 Glutamate mutase sigma subunit RAM_24425 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily RAM_24425 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic RAM_24425 IPR006396 Glutamate mutase epsilon subunit RAM_24435 IPR010071 Amino acid adenylation domain RAM_24435 IPR025110 AMP-binding enzyme, C-terminal domain RAM_24435 IPR036736 ACP-like superfamily RAM_24435 IPR020802 Polyketide synthase, thioesterase domain RAM_24435 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_24435 IPR001242 Condensation domain RAM_24435 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_24435 IPR001031 Thioesterase RAM_24435 IPR042099 AMP-dependent synthetase-like superfamily RAM_24435 IPR029058 Alpha/Beta hydrolase fold RAM_24435 IPR009081 Phosphopantetheine binding ACP domain RAM_24435 IPR000873 AMP-dependent synthetase/ligase RAM_24435 IPR020845 AMP-binding, conserved site RAM_24455 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_24455 IPR010071 Amino acid adenylation domain RAM_24455 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_24455 IPR009081 Phosphopantetheine binding ACP domain RAM_24455 IPR006162 Phosphopantetheine attachment site RAM_24455 IPR036736 ACP-like superfamily RAM_24455 IPR025110 AMP-binding enzyme, C-terminal domain RAM_24455 IPR020845 AMP-binding, conserved site RAM_24455 IPR001242 Condensation domain RAM_24455 IPR010060 Non-ribosomal peptide synthase RAM_24455 IPR000873 AMP-dependent synthetase/ligase RAM_24455 IPR042099 AMP-dependent synthetase-like superfamily RAM_24460 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_24460 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24460 IPR019734 Tetratricopeptide repeat RAM_24460 IPR016032 Signal transduction response regulator, C-terminal effector RAM_24460 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_24460 IPR002182 NB-ARC RAM_24460 IPR005158 Bacterial transcriptional activator domain RAM_24460 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_24470 IPR005158 Bacterial transcriptional activator domain RAM_24470 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24470 IPR019734 Tetratricopeptide repeat RAM_24470 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_24470 IPR016032 Signal transduction response regulator, C-terminal effector RAM_24470 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_24470 IPR002182 NB-ARC RAM_24470 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_24480 IPR015358 Transcription regulator MerR, DNA binding RAM_24480 IPR011789 Cu(I)-responsive transcriptional regulator RAM_24480 IPR009061 Putative DNA-binding domain superfamily RAM_24480 IPR000551 MerR-type HTH domain RAM_24520 IPR000772 Ricin B, lectin domain RAM_24520 IPR035992 Ricin B-like lectins RAM_24520 IPR005193 Glycoside hydrolase, family 62, arabinosidase RAM_24520 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RAM_24530 IPR002401 Cytochrome P450, E-class, group I RAM_24530 IPR036396 Cytochrome P450 superfamily RAM_24530 IPR001128 Cytochrome P450 RAM_24550 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_24550 IPR001279 Metallo-beta-lactamase RAM_24550 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D RAM_24565 IPR016032 Signal transduction response regulator, C-terminal effector RAM_24565 IPR001789 Signal transduction response regulator, receiver domain RAM_24565 IPR011006 CheY-like superfamily RAM_24565 IPR000792 Transcription regulator LuxR, C-terminal RAM_24570 IPR001789 Signal transduction response regulator, receiver domain RAM_24570 IPR000792 Transcription regulator LuxR, C-terminal RAM_24570 IPR016032 Signal transduction response regulator, C-terminal effector RAM_24570 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24570 IPR011006 CheY-like superfamily RAM_24580 IPR014167 Tol-Pal system protein TolB RAM_24580 IPR011042 Six-bladed beta-propeller, TolB-like RAM_24580 IPR011659 WD40-like Beta Propeller RAM_24580 IPR036752 TolB, N-terminal domain superfamily RAM_24580 IPR007195 TolB, N-terminal RAM_24665 IPR003593 AAA+ ATPase domain RAM_24665 IPR003960 ATPase, AAA-type, conserved site RAM_24665 IPR022482 Proteasome ATPase RAM_24665 IPR041626 Proteasomal ATPase, N-terminal OB domain RAM_24665 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_24665 IPR003959 ATPase, AAA-type, core RAM_24665 IPR032501 Proteasomal ATPase OB C-terminal domain RAM_24690 IPR006680 Amidohydrolase-related RAM_24690 IPR023512 Deaminase MtaD/DadD RAM_24690 IPR032466 Metal-dependent hydrolase RAM_24690 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_24695 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24695 IPR036390 Winged helix DNA-binding domain superfamily RAM_24695 IPR014757 Transcription regulator IclR, C-terminal RAM_24695 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR RAM_24695 IPR029016 GAF-like domain superfamily RAM_24695 IPR005471 Transcription regulator IclR, N-terminal RAM_24700 IPR023606 CoA-transferase family III domain superfamily RAM_24700 IPR003673 CoA-transferase family III RAM_24710 IPR015889 Intradiol ring-cleavage dioxygenase, core RAM_24710 IPR039390 Hydroxyquinol/catechol 1,2-dioxygenase RAM_24710 IPR007535 Catechol dioxygenase, N-terminal RAM_24710 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal RAM_24730 IPR036573 Carbohydrate-binding module superfamily 5/12 RAM_24730 IPR003610 Carbohydrate-binding module family 5/12 RAM_24730 IPR017853 Glycoside hydrolase superfamily RAM_24740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_24740 IPR015854 ABC transporter, lipoprotein release, LolD RAM_24740 IPR017871 ABC transporter, conserved site RAM_24740 IPR003439 ABC transporter-like RAM_24740 IPR003593 AAA+ ATPase domain RAM_24750 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_24750 IPR002938 FAD-binding domain RAM_24760 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_24760 IPR036291 NAD(P)-binding domain superfamily RAM_24760 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_24765 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24765 IPR000847 Transcription regulator HTH, LysR RAM_24765 IPR005119 LysR, substrate-binding RAM_24765 IPR036390 Winged helix DNA-binding domain superfamily RAM_24775 IPR023048 NADH-azoreductase, FMN-dependent RAM_24775 IPR029039 Flavoprotein-like superfamily RAM_24775 IPR003680 Flavodoxin-like fold RAM_24780 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_24780 IPR009057 Homeobox-like domain superfamily RAM_24780 IPR001647 DNA-binding HTH domain, TetR-type RAM_24800 IPR011991 ArsR-like helix-turn-helix domain RAM_24800 IPR011008 Dimeric alpha-beta barrel RAM_24800 IPR019888 Transcription regulator AsnC-type RAM_24800 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RAM_24800 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24800 IPR000485 AsnC-type HTH domain RAM_24800 IPR036390 Winged helix DNA-binding domain superfamily RAM_24805 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RAM_24805 IPR000994 Peptidase M24 RAM_24805 IPR000587 Creatinase, N-terminal RAM_24805 IPR036005 Creatinase/aminopeptidase-like RAM_24805 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RAM_24810 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RAM_24810 IPR008918 Helix-hairpin-helix motif, class 2 RAM_24810 IPR038969 Flap endonuclease RAM_24810 IPR029060 PIN-like domain superfamily RAM_24810 IPR020045 DNA polymerase I-like, H3TH domain RAM_24810 IPR036279 5'-3' exonuclease, C-terminal domain superfamily RAM_24810 IPR002421 5'-3' exonuclease, N-terminal RAM_24815 IPR025559 Enhanced intracellular survival protein domain RAM_24815 IPR036527 SCP2 sterol-binding domain superfamily RAM_24815 IPR022902 N-acetyltransferase Eis RAM_24815 IPR000182 GNAT domain RAM_24815 IPR041380 Eis-like, acetyltransferase domain RAM_24815 IPR016181 Acyl-CoA N-acyltransferase RAM_24820 IPR041380 Eis-like, acetyltransferase domain RAM_24820 IPR016181 Acyl-CoA N-acyltransferase RAM_24820 IPR025559 Enhanced intracellular survival protein domain RAM_24820 IPR036527 SCP2 sterol-binding domain superfamily RAM_24820 IPR000182 GNAT domain RAM_24820 IPR022902 N-acetyltransferase Eis RAM_24830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_24830 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_24830 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal RAM_24830 IPR011545 DEAD/DEAH box helicase domain RAM_24830 IPR001650 Helicase, C-terminal RAM_24840 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RAM_24840 IPR005218 Diacylglycerol/lipid kinase RAM_24840 IPR001206 Diacylglycerol kinase, catalytic domain RAM_24840 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RAM_24845 IPR019820 Sec-independent periplasmic protein translocase, conserved site RAM_24845 IPR002033 Sec-independent periplasmic protein translocase TatC RAM_24850 IPR006312 Sec-independent protein translocase protein TatA/E RAM_24850 IPR003369 Sec-independent protein translocase protein TatA/B/E RAM_24860 IPR026881 WYL domain RAM_24860 IPR028349 Protein PafC RAM_24865 IPR026881 WYL domain RAM_24870 IPR002577 Helix-turn-helix, HxlR type RAM_24870 IPR036390 Winged helix DNA-binding domain superfamily RAM_24870 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24880 IPR036291 NAD(P)-binding domain superfamily RAM_24880 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_24890 IPR004347 Pup ligase/deamidase RAM_24890 IPR022279 Pup--protein ligase RAM_24905 IPR023332 Proteasome alpha-type subunit RAM_24905 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_24905 IPR001353 Proteasome, subunit alpha/beta RAM_24905 IPR022296 Proteasome, alpha subunit, bacterial RAM_24910 IPR001353 Proteasome, subunit alpha/beta RAM_24910 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria RAM_24910 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_24910 IPR023333 Proteasome B-type subunit RAM_24915 IPR008515 Ubiquitin-like, Pup RAM_24920 IPR022366 Pup deamidase RAM_24920 IPR004347 Pup ligase/deamidase RAM_24925 IPR000086 NUDIX hydrolase domain RAM_24925 IPR015797 NUDIX hydrolase-like domain superfamily RAM_24925 IPR020084 NUDIX hydrolase, conserved site RAM_24925 IPR024195 NUDIX hydrolase, YfcD, predicted RAM_24945 IPR036390 Winged helix DNA-binding domain superfamily RAM_24945 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_24945 IPR001845 HTH ArsR-type DNA-binding domain RAM_24945 IPR011991 ArsR-like helix-turn-helix domain RAM_24960 IPR000620 EamA domain RAM_24965 IPR022482 Proteasome ATPase RAM_24965 IPR032501 Proteasomal ATPase OB C-terminal domain RAM_24965 IPR041626 Proteasomal ATPase, N-terminal OB domain RAM_24965 IPR003959 ATPase, AAA-type, core RAM_24965 IPR003593 AAA+ ATPase domain RAM_24965 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_24965 IPR003960 ATPase, AAA-type, conserved site RAM_24985 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 RAM_24985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_24990 IPR008915 Peptidase M50 RAM_24990 IPR000644 CBS domain RAM_24990 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS RAM_25005 IPR025669 AAA domain RAM_25005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25010 IPR001348 ATP phosphoribosyltransferase HisG RAM_25010 IPR018198 ATP phosphoribosyltransferase, conserved site RAM_25010 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RAM_25010 IPR011322 Nitrogen regulatory PII-like, alpha/beta RAM_25010 IPR013115 Histidine biosynthesis HisG, C-terminal RAM_25010 IPR020621 ATP phosphoribosyltransferase HisG, long form RAM_25010 IPR013820 ATP phosphoribosyltransferase, catalytic domain RAM_25015 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase RAM_25015 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like RAM_25020 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RAM_25020 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RAM_25020 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_25020 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RAM_25020 IPR023546 Methylated-DNA--protein-cysteine methyltransferase RAM_25020 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily RAM_25020 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain RAM_25025 IPR004026 Ada DNA repair, metal-binding RAM_25025 IPR011257 DNA glycosylase RAM_25025 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RAM_25025 IPR009057 Homeobox-like domain superfamily RAM_25025 IPR003265 HhH-GPD domain RAM_25025 IPR018060 DNA binding HTH domain, AraC-type RAM_25025 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RAM_25025 IPR035451 Ada-like domain superfamily RAM_25025 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily RAM_25025 IPR018062 HTH domain AraC-type, conserved site RAM_25030 IPR036412 HAD-like superfamily RAM_25030 IPR006439 HAD hydrolase, subfamily IA RAM_25030 IPR041492 Haloacid dehalogenase-like hydrolase RAM_25030 IPR023214 HAD superfamily RAM_25030 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RAM_25035 IPR011822 Cobalamin-dependent methionine synthase RAM_25035 IPR033706 Methionine synthase, B12-binding domain RAM_25035 IPR036589 Homocysteine-binding domain superfamily RAM_25035 IPR003726 Homocysteine-binding domain RAM_25035 IPR011005 Dihydropteroate synthase-like RAM_25035 IPR036724 Cobalamin-binding domain superfamily RAM_25035 IPR006158 Cobalamin (vitamin B12)-binding domain RAM_25035 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RAM_25035 IPR036594 Methionine synthase domain RAM_25035 IPR004223 Vitamin B12-dependent methionine synthase, activation domain RAM_25035 IPR000489 Pterin-binding domain RAM_25035 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily RAM_25050 IPR001559 Phosphotriesterase RAM_25050 IPR032466 Metal-dependent hydrolase RAM_25070 IPR001466 Beta-lactamase-related RAM_25070 IPR012338 Beta-lactamase/transpeptidase-like RAM_25075 IPR036259 MFS transporter superfamily RAM_25075 IPR011701 Major facilitator superfamily RAM_25075 IPR020846 Major facilitator superfamily domain RAM_25090 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25090 IPR003593 AAA+ ATPase domain RAM_25090 IPR017871 ABC transporter, conserved site RAM_25090 IPR003439 ABC transporter-like RAM_25095 IPR032678 tRNA synthetases class I, catalytic domain RAM_25095 IPR017812 Mycothiol ligase MshC RAM_25095 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RAM_25095 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_25100 IPR009061 Putative DNA-binding domain superfamily RAM_25100 IPR012925 TipAS antibiotic-recognition domain RAM_25100 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain RAM_25100 IPR000551 MerR-type HTH domain RAM_25105 IPR006679 Adenine deaminase RAM_25105 IPR026912 Adenine deaminase C-terminal domain RAM_25105 IPR032466 Metal-dependent hydrolase RAM_25105 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_25105 IPR006680 Amidohydrolase-related RAM_25110 IPR002035 von Willebrand factor, type A RAM_25110 IPR036465 von Willebrand factor A-like domain superfamily RAM_25115 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25115 IPR041628 ChlI/MoxR, AAA lid domain RAM_25115 IPR011775 Magnesium chelatase, ATPase subunit I RAM_25115 IPR003593 AAA+ ATPase domain RAM_25115 IPR000523 Magnesium chelatase ChlI domain RAM_25145 IPR020846 Major facilitator superfamily domain RAM_25145 IPR036259 MFS transporter superfamily RAM_25145 IPR011701 Major facilitator superfamily RAM_25150 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RAM_25150 IPR036291 NAD(P)-binding domain superfamily RAM_25155 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_25155 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_25155 IPR036291 NAD(P)-binding domain superfamily RAM_25160 IPR020846 Major facilitator superfamily domain RAM_25160 IPR036259 MFS transporter superfamily RAM_25160 IPR005828 Major facilitator, sugar transporter-like RAM_25160 IPR004736 MFS transporter, metabolite:H symporter RAM_25160 IPR005829 Sugar transporter, conserved site RAM_25165 IPR039420 Transcriptional regulatory protein WalR-like RAM_25165 IPR001789 Signal transduction response regulator, receiver domain RAM_25165 IPR011006 CheY-like superfamily RAM_25165 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_25165 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_25170 IPR005467 Histidine kinase domain RAM_25170 IPR003594 Histidine kinase/HSP90-like ATPase RAM_25170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_25170 IPR003660 HAMP domain RAM_25170 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_25170 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_25170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_25185 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RAM_25185 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase RAM_25185 IPR001537 tRNA/rRNA methyltransferase, SpoU type RAM_25185 IPR029028 Alpha/beta knot methyltransferases RAM_25195 IPR036465 von Willebrand factor A-like domain superfamily RAM_25195 IPR002035 von Willebrand factor, type A RAM_25195 IPR022933 Uncharacterised protein family UPF0353 RAM_25195 IPR024163 Aerotolerance regulator, N-terminal RAM_25200 IPR036465 von Willebrand factor A-like domain superfamily RAM_25200 IPR002881 Domain of unknown function DUF58 RAM_25205 IPR011703 ATPase, AAA-3 RAM_25205 IPR041628 ChlI/MoxR, AAA lid domain RAM_25205 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25210 IPR029044 Nucleotide-diphospho-sugar transferases RAM_25210 IPR013482 Molybdenum cofactor guanylyltransferase RAM_25210 IPR025877 MobA-like NTP transferase RAM_25215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_25215 IPR003333 Mycolic acid cyclopropane synthase RAM_25220 IPR038765 Papain-like cysteine peptidase superfamily RAM_25220 IPR000064 Endopeptidase, NLPC/P60 domain RAM_25225 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RAM_25225 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain RAM_25225 IPR006249 Aconitase/Iron-responsive element-binding protein 2 RAM_25225 IPR018136 Aconitase family, 4Fe-4S cluster binding site RAM_25225 IPR036008 Aconitase, iron-sulfur domain RAM_25225 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RAM_25230 IPR003416 MgtC/SapB/SrpB/YhiD family RAM_25240 IPR001647 DNA-binding HTH domain, TetR-type RAM_25240 IPR009057 Homeobox-like domain superfamily RAM_25240 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_25245 IPR000073 Alpha/beta hydrolase fold-1 RAM_25245 IPR029058 Alpha/Beta hydrolase fold RAM_25255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_25255 IPR017804 Methyltransferase EgtD-like RAM_25255 IPR019257 Histidine-specific methyltransferase, SAM-dependent RAM_25255 IPR032888 Histidine N-alpha-methyltransferase, Actinobacteria-type RAM_25255 IPR035094 Histidine N-alpha-methyltransferase RAM_25265 IPR042095 Sulfatase-modifying factor enzyme superfamily RAM_25265 IPR005532 Sulfatase-modifying factor enzyme RAM_25265 IPR032890 Hercynine oxygenase, Actinobacteria RAM_25265 IPR017806 Ergothioneine biosynthesis protein EgtB RAM_25265 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_25265 IPR016187 C-type lectin fold RAM_25265 IPR024775 DinB-like domain RAM_25270 IPR035434 Glutamate--cysteine ligase, bacteria and plant RAM_25270 IPR017809 Glutamate--cysteine ligase EgtA, Actinobacteria RAM_25270 IPR006336 Glutamate--cysteine ligase, GCS2 RAM_25270 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_25280 IPR036291 NAD(P)-binding domain superfamily RAM_25280 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RAM_25280 IPR033524 Leu/Phe/Val dehydrogenases active site RAM_25280 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RAM_25280 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RAM_25280 IPR014362 Glutamate dehydrogenase RAM_25280 IPR033922 NAD(P) binding domain of glutamate dehydrogenase RAM_25285 IPR000073 Alpha/beta hydrolase fold-1 RAM_25285 IPR029058 Alpha/Beta hydrolase fold RAM_25285 IPR005944 Proline iminopeptidase RAM_25285 IPR002410 Peptidase S33 RAM_25310 IPR009057 Homeobox-like domain superfamily RAM_25310 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_25310 IPR001647 DNA-binding HTH domain, TetR-type RAM_25315 IPR005170 Transporter-associated domain RAM_25315 IPR002550 CNNM, transmembrane domain RAM_25315 IPR000644 CBS domain RAM_25315 IPR036318 FAD-binding, type PCMH-like superfamily RAM_25315 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_25320 IPR000644 CBS domain RAM_25320 IPR002550 CNNM, transmembrane domain RAM_25335 IPR020471 Aldo/keto reductase RAM_25335 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_25335 IPR023210 NADP-dependent oxidoreductase domain RAM_25335 IPR018170 Aldo/keto reductase, conserved site RAM_25350 IPR001509 NAD-dependent epimerase/dehydratase RAM_25350 IPR036291 NAD(P)-binding domain superfamily RAM_25350 IPR005886 UDP-glucose 4-epimerase RAM_25360 IPR001173 Glycosyltransferase 2-like RAM_25360 IPR029044 Nucleotide-diphospho-sugar transferases RAM_25365 IPR005888 dTDP-glucose 4,6-dehydratase RAM_25365 IPR016040 NAD(P)-binding domain RAM_25365 IPR036291 NAD(P)-binding domain superfamily RAM_25370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_25370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_25370 IPR003437 Glycine dehydrogenase (decarboxylating) RAM_25370 IPR020581 Glycine cleavage system P protein RAM_25370 IPR015424 Pyridoxal phosphate-dependent transferase RAM_25375 IPR000551 MerR-type HTH domain RAM_25375 IPR009061 Putative DNA-binding domain superfamily RAM_25385 IPR013766 Thioredoxin domain RAM_25385 IPR005746 Thioredoxin RAM_25385 IPR036249 Thioredoxin-like superfamily RAM_25385 IPR017937 Thioredoxin, conserved site RAM_25390 IPR000551 MerR-type HTH domain RAM_25390 IPR009061 Putative DNA-binding domain superfamily RAM_25390 IPR011789 Cu(I)-responsive transcriptional regulator RAM_25395 IPR036104 Bifunctional nuclease superfamily RAM_25395 IPR003729 Bifunctional nuclease domain RAM_25400 IPR000551 MerR-type HTH domain RAM_25400 IPR009061 Putative DNA-binding domain superfamily RAM_25405 IPR000253 Forkhead-associated (FHA) domain RAM_25405 IPR008984 SMAD/FHA domain superfamily RAM_25410 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RAM_25410 IPR002930 Glycine cleavage system H-protein RAM_25410 IPR033753 Glycine cleavage system H-protein/Simiate RAM_25410 IPR017453 Glycine cleavage system H-protein, subgroup RAM_25410 IPR011053 Single hybrid motif RAM_25410 IPR000089 Biotin/lipoyl attachment RAM_25435 IPR020845 AMP-binding, conserved site RAM_25435 IPR025110 AMP-binding enzyme, C-terminal domain RAM_25435 IPR000873 AMP-dependent synthetase/ligase RAM_25435 IPR042099 AMP-dependent synthetase-like superfamily RAM_25440 IPR001753 Enoyl-CoA hydratase/isomerase RAM_25440 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_25440 IPR029045 ClpP/crotonase-like domain superfamily RAM_25440 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_25445 IPR000073 Alpha/beta hydrolase fold-1 RAM_25445 IPR029058 Alpha/Beta hydrolase fold RAM_25445 IPR000639 Epoxide hydrolase-like RAM_25450 IPR006366 Uroporphyrin-III C-methyltransferase RAM_25450 IPR035996 Tetrapyrrole methylase superfamily RAM_25450 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RAM_25450 IPR006367 Sirohaem synthase, N-terminal RAM_25450 IPR019478 Sirohaem synthase, dimerisation domain RAM_25450 IPR012409 Sirohaem synthase RAM_25450 IPR037115 Sirohaem synthase, dimerisation domain superfamily RAM_25450 IPR000878 Tetrapyrrole methylase RAM_25450 IPR014776 Tetrapyrrole methylase, subdomain 2 RAM_25450 IPR014777 Tetrapyrrole methylase, subdomain 1 RAM_25450 IPR036291 NAD(P)-binding domain superfamily RAM_25465 IPR001209 Ribosomal protein S14 RAM_25465 IPR023036 Ribosomal protein S14, bacterial/plastid RAM_25470 IPR011332 Zinc-binding ribosomal protein RAM_25470 IPR038584 Ribosomal protein L33 superfamily RAM_25470 IPR001705 Ribosomal protein L33 RAM_25470 IPR018264 Ribosomal protein L33, conserved site RAM_25480 IPR002150 Ribosomal protein L31 RAM_25480 IPR034704 L28p-like RAM_25480 IPR042105 Ribosomal protein L31 superfamily RAM_25480 IPR027493 Ribosomal protein L31 type B RAM_25485 IPR011332 Zinc-binding ribosomal protein RAM_25485 IPR002677 Ribosomal protein L32p RAM_25505 IPR029058 Alpha/Beta hydrolase fold RAM_25505 IPR002925 Dienelactone hydrolase RAM_25515 IPR002129 Pyridoxal phosphate-dependent decarboxylase RAM_25515 IPR015424 Pyridoxal phosphate-dependent transferase RAM_25515 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_25515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_25520 IPR018043 Sodium:galactoside symporter, conserved site RAM_25520 IPR039672 Lactose permease-like RAM_25520 IPR020846 Major facilitator superfamily domain RAM_25520 IPR036259 MFS transporter superfamily RAM_25520 IPR001927 Sodium:galactoside symporter RAM_25525 IPR036661 Luciferase-like domain superfamily RAM_25525 IPR011251 Luciferase-like domain RAM_25525 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c RAM_25560 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent RAM_25560 IPR036661 Luciferase-like domain superfamily RAM_25560 IPR011251 Luciferase-like domain RAM_25570 IPR017871 ABC transporter, conserved site RAM_25570 IPR003439 ABC transporter-like RAM_25570 IPR003593 AAA+ ATPase domain RAM_25570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25570 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB RAM_25575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_25575 IPR035906 MetI-like superfamily RAM_25580 IPR017782 Hydroxyacylglutathione hydrolase RAM_25580 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_25580 IPR001279 Metallo-beta-lactamase RAM_25580 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain RAM_25580 IPR001018 Beta-lactamase, class-B, conserved site RAM_25580 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain RAM_25585 IPR002319 Phenylalanyl-tRNA synthetase RAM_25585 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RAM_25585 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_25585 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RAM_25585 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RAM_25585 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RAM_25605 IPR011527 ABC transporter type 1, transmembrane domain RAM_25605 IPR003593 AAA+ ATPase domain RAM_25605 IPR039421 Type I protein exporter RAM_25605 IPR003439 ABC transporter-like RAM_25605 IPR017871 ABC transporter, conserved site RAM_25605 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25605 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_25610 IPR011527 ABC transporter type 1, transmembrane domain RAM_25610 IPR017871 ABC transporter, conserved site RAM_25610 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_25610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25610 IPR003439 ABC transporter-like RAM_25610 IPR039421 Type I protein exporter RAM_25610 IPR003593 AAA+ ATPase domain RAM_25615 IPR037407 MbtH-like protein RAM_25615 IPR005153 MbtH-like domain RAM_25615 IPR038020 MbtH-like domain superfamily RAM_25625 IPR003190 Aspartate decarboxylase RAM_25625 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_25630 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_25630 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_25630 IPR010060 Non-ribosomal peptide synthase RAM_25630 IPR001242 Condensation domain RAM_25630 IPR036736 ACP-like superfamily RAM_25630 IPR020845 AMP-binding, conserved site RAM_25630 IPR009081 Phosphopantetheine binding ACP domain RAM_25630 IPR042099 AMP-dependent synthetase-like superfamily RAM_25630 IPR025110 AMP-binding enzyme, C-terminal domain RAM_25630 IPR006162 Phosphopantetheine attachment site RAM_25630 IPR000873 AMP-dependent synthetase/ligase RAM_25630 IPR010071 Amino acid adenylation domain RAM_25635 IPR037294 ABC transporter, BtuC-like RAM_25635 IPR000522 ABC transporter, permease protein, BtuC-like RAM_25640 IPR037294 ABC transporter, BtuC-like RAM_25640 IPR000522 ABC transporter, permease protein, BtuC-like RAM_25645 IPR017871 ABC transporter, conserved site RAM_25645 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25645 IPR003439 ABC transporter-like RAM_25645 IPR003593 AAA+ ATPase domain RAM_25655 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase RAM_25655 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_25660 IPR001509 NAD-dependent epimerase/dehydratase RAM_25660 IPR005793 Formyl transferase, C-terminal RAM_25660 IPR002376 Formyl transferase, N-terminal RAM_25660 IPR021168 Bifunctional polymyxin resistance protein, ArnA RAM_25660 IPR036477 Formyl transferase, N-terminal domain superfamily RAM_25660 IPR011034 Formyl transferase-like, C-terminal domain superfamily RAM_25660 IPR036291 NAD(P)-binding domain superfamily RAM_25670 IPR038417 Alpha-galactosidase, N-terminal domain superfamily RAM_25670 IPR013780 Glycosyl hydrolase, all-beta RAM_25670 IPR031704 Glycosyl hydrolase family 36, N-terminal RAM_25670 IPR031705 Glycosyl hydrolase family 36, C-terminal RAM_25670 IPR013785 Aldolase-type TIM barrel RAM_25670 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_25670 IPR002252 Glycoside hydrolase family 36 RAM_25670 IPR017853 Glycoside hydrolase superfamily RAM_25680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_25680 IPR035906 MetI-like superfamily RAM_25690 IPR032781 ABC-transporter extension domain RAM_25690 IPR003439 ABC transporter-like RAM_25690 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25690 IPR003593 AAA+ ATPase domain RAM_25690 IPR017871 ABC transporter, conserved site RAM_25700 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_25700 IPR001753 Enoyl-CoA hydratase/isomerase RAM_25700 IPR029045 ClpP/crotonase-like domain superfamily RAM_25700 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_25705 IPR001919 Carbohydrate-binding type-2 domain RAM_25705 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_25705 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_25705 IPR018366 Carbohydrate-binding type-2, conserved site RAM_25705 IPR011583 Chitinase II RAM_25705 IPR013783 Immunoglobulin-like fold RAM_25705 IPR003961 Fibronectin type III RAM_25705 IPR036116 Fibronectin type III superfamily RAM_25705 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_25705 IPR001579 Glycoside hydrolase, chitinase active site RAM_25705 IPR029070 Chitinase insertion domain superfamily RAM_25705 IPR017853 Glycoside hydrolase superfamily RAM_25710 IPR010998 Integrase/recombinase, N-terminal RAM_25710 IPR002104 Integrase, catalytic domain RAM_25710 IPR013762 Integrase-like, catalytic domain superfamily RAM_25710 IPR011010 DNA breaking-rejoining enzyme, catalytic core RAM_25735 IPR025161 Putative transposase IS4/IS5 family RAM_25750 IPR011010 DNA breaking-rejoining enzyme, catalytic core RAM_25750 IPR002104 Integrase, catalytic domain RAM_25750 IPR010998 Integrase/recombinase, N-terminal RAM_25750 IPR013762 Integrase-like, catalytic domain superfamily RAM_25780 IPR029052 Metallo-dependent phosphatase-like RAM_25780 IPR008963 Purple acid phosphatase-like, N-terminal RAM_25780 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_25780 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RAM_25780 IPR015914 Purple acid phosphatase, N-terminal RAM_25780 IPR039331 Purple acid phosphatase-like RAM_25785 IPR000757 Glycoside hydrolase family 16 RAM_25785 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RAM_25785 IPR008263 Glycoside hydrolase, family 16, active site RAM_25790 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_25790 IPR001919 Carbohydrate-binding type-2 domain RAM_25790 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_25790 IPR017853 Glycoside hydrolase superfamily RAM_25790 IPR001000 Glycoside hydrolase family 10 domain RAM_25795 IPR000600 ROK family RAM_25795 IPR036390 Winged helix DNA-binding domain superfamily RAM_25795 IPR000835 MarR-type HTH domain RAM_25795 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_25800 IPR029018 Beta-hexosaminidase-like, domain 2 RAM_25800 IPR017853 Glycoside hydrolase superfamily RAM_25800 IPR015883 Glycoside hydrolase family 20, catalytic domain RAM_25800 IPR025705 Beta-hexosaminidase RAM_25800 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal RAM_25805 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain RAM_25805 IPR017853 Glycoside hydrolase superfamily RAM_25805 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_25805 IPR028829 Exo-beta-D-glucosaminidase RAM_25805 IPR008979 Galactose-binding-like domain superfamily RAM_25805 IPR013783 Immunoglobulin-like fold RAM_25805 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_25805 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_25810 IPR019834 Glycoside hydrolase, family 8, conserved site RAM_25810 IPR012341 Six-hairpin glycosidase-like superfamily RAM_25810 IPR002037 Glycoside hydrolase, family 8 RAM_25810 IPR008928 Six-hairpin glycosidase superfamily RAM_25825 IPR029017 Enolase-like, N-terminal RAM_25825 IPR029065 Enolase C-terminal domain-like RAM_25825 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_25825 IPR036849 Enolase-like, C-terminal domain superfamily RAM_25825 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_25825 IPR034603 Dipeptide epimerase RAM_25830 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_25830 IPR000843 LacI-type HTH domain RAM_25830 IPR028082 Periplasmic binding protein-like I RAM_25830 IPR006377 Catabolite control protein A RAM_25835 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_25835 IPR029065 Enolase C-terminal domain-like RAM_25835 IPR029017 Enolase-like, N-terminal RAM_25835 IPR036849 Enolase-like, C-terminal domain superfamily RAM_25835 IPR034603 Dipeptide epimerase RAM_25835 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_25840 IPR035906 MetI-like superfamily RAM_25840 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_25850 IPR003593 AAA+ ATPase domain RAM_25850 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25850 IPR003439 ABC transporter-like RAM_25850 IPR017871 ABC transporter, conserved site RAM_25850 IPR005890 Nitrate transport ATP-binding subunit C/D RAM_25855 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_25855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_25855 IPR005467 Histidine kinase domain RAM_25855 IPR003594 Histidine kinase/HSP90-like ATPase RAM_25855 IPR003660 HAMP domain RAM_25855 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_25855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_25860 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_25860 IPR039420 Transcriptional regulatory protein WalR-like RAM_25860 IPR001789 Signal transduction response regulator, receiver domain RAM_25860 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_25860 IPR011006 CheY-like superfamily RAM_25880 IPR016292 Epoxide hydrolase RAM_25880 IPR000639 Epoxide hydrolase-like RAM_25880 IPR000073 Alpha/beta hydrolase fold-1 RAM_25880 IPR029058 Alpha/Beta hydrolase fold RAM_25885 IPR004638 Drug resistance transporter EmrB-like RAM_25885 IPR036259 MFS transporter superfamily RAM_25885 IPR011701 Major facilitator superfamily RAM_25885 IPR020846 Major facilitator superfamily domain RAM_25890 IPR000835 MarR-type HTH domain RAM_25890 IPR036390 Winged helix DNA-binding domain superfamily RAM_25890 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_25895 IPR022357 Major intrinsic protein, conserved site RAM_25895 IPR023743 Aquaporin Z RAM_25895 IPR034294 Aquaporin transporter RAM_25895 IPR023271 Aquaporin-like RAM_25895 IPR000425 Major intrinsic protein RAM_25905 IPR029061 Thiamin diphosphate-binding fold RAM_25905 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_25905 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_25905 IPR000399 TPP-binding enzyme, conserved site RAM_25905 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_25905 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_25910 IPR002471 Peptidase S9, serine active site RAM_25910 IPR029058 Alpha/Beta hydrolase fold RAM_25910 IPR002925 Dienelactone hydrolase RAM_25915 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_25915 IPR036291 NAD(P)-binding domain superfamily RAM_25915 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_25915 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_25920 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily RAM_25920 IPR011234 Fumarylacetoacetase-like, C-terminal RAM_25930 IPR002938 FAD-binding domain RAM_25930 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_25940 IPR037416 Nodulation protein D, PBP2 RAM_25940 IPR000847 Transcription regulator HTH, LysR RAM_25940 IPR005119 LysR, substrate-binding RAM_25940 IPR036390 Winged helix DNA-binding domain superfamily RAM_25940 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_25950 IPR003439 ABC transporter-like RAM_25950 IPR015861 ABC transporter, ribose import, RbsA RAM_25950 IPR017871 ABC transporter, conserved site RAM_25950 IPR003593 AAA+ ATPase domain RAM_25950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25955 IPR001851 ABC transporter, permease RAM_25970 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_25970 IPR039425 RNA polymerase sigma-70 like RAM_25970 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_25970 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_25970 IPR007627 RNA polymerase sigma-70 region 2 RAM_25970 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_25970 IPR014286 RNA polymerase sigma-70 RpoE type RAM_25970 IPR013325 RNA polymerase sigma factor, region 2 RAM_25970 IPR014284 RNA polymerase sigma-70 like domain RAM_25980 IPR003593 AAA+ ATPase domain RAM_25980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_25980 IPR019489 Clp ATPase, C-terminal RAM_25980 IPR003959 ATPase, AAA-type, core RAM_25980 IPR004487 Clp protease, ATP-binding subunit ClpX RAM_25980 IPR010603 Zinc finger, ClpX C4-type RAM_25980 IPR038366 Zinc finger, ClpX C4-type superfamily RAM_26000 IPR008270 Glycoside hydrolase, family 25, active site RAM_26000 IPR018077 Glycoside hydrolase, family 25 subgroup RAM_26000 IPR017853 Glycoside hydrolase superfamily RAM_26000 IPR002053 Glycoside hydrolase, family 25 RAM_26005 IPR010723 HemN, C-terminal RAM_26005 IPR006638 Elp3/MiaB/NifB RAM_26005 IPR034505 Anaerobic coproporphyrinogen-III oxidase RAM_26005 IPR004559 Heme chaperone HemW-like RAM_26005 IPR007197 Radical SAM RAM_26005 IPR023404 Radical SAM, alpha/beta horseshoe RAM_26010 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase RAM_26010 IPR029044 Nucleotide-diphospho-sugar transferases RAM_26010 IPR001173 Glycosyltransferase 2-like RAM_26045 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_26045 IPR036291 NAD(P)-binding domain superfamily RAM_26045 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_26055 IPR015191 Translation elongation factor SelB, winged helix, type 3 RAM_26055 IPR009000 Translation protein, beta-barrel domain superfamily RAM_26055 IPR004161 Translation elongation factor EFTu-like, domain 2 RAM_26055 IPR005225 Small GTP-binding protein domain RAM_26055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_26055 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RAM_26055 IPR015189 Translation elongation factor SelB, winged helix, type 1 RAM_26055 IPR009000 Translation protein, beta-barrel domain superfamily RAM_26055 IPR000795 Transcription factor, GTP-binding domain RAM_26055 IPR005225 Small GTP-binding protein domain RAM_26055 IPR036390 Winged helix DNA-binding domain superfamily RAM_26055 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_26055 IPR004535 Translation elongation factor, selenocysteine-specific RAM_26055 IPR004535 Translation elongation factor, selenocysteine-specific RAM_26055 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_26055 IPR036390 Winged helix DNA-binding domain superfamily RAM_26055 IPR004161 Translation elongation factor EFTu-like, domain 2 RAM_26055 IPR015191 Translation elongation factor SelB, winged helix, type 3 RAM_26055 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RAM_26055 IPR015190 Translation elongation factor SelB, winged helix, type 2 RAM_26055 IPR015189 Translation elongation factor SelB, winged helix, type 1 RAM_26055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_26055 IPR015190 Translation elongation factor SelB, winged helix, type 2 RAM_26055 IPR000795 Transcription factor, GTP-binding domain RAM_26060 IPR004534 L-seryl-tRNA(Sec) selenium transferase RAM_26060 IPR018319 L-seryl-tRNA selenium transferase-like RAM_26060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_26060 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain RAM_26060 IPR015424 Pyridoxal phosphate-dependent transferase RAM_26070 IPR036676 PurM-like, C-terminal domain superfamily RAM_26070 IPR016188 PurM-like, N-terminal domain RAM_26070 IPR036921 PurM-like, N-terminal domain superfamily RAM_26070 IPR023061 Selenophosphate synthetase, class I RAM_26070 IPR004536 Selenophosphate synthetase RAM_26070 IPR010918 PurM-like, C-terminal domain RAM_26090 IPR012338 Beta-lactamase/transpeptidase-like RAM_26095 IPR000847 Transcription regulator HTH, LysR RAM_26095 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_26095 IPR036390 Winged helix DNA-binding domain superfamily RAM_26100 IPR023650 Beta-lactamase, class-A active site RAM_26100 IPR000871 Beta-lactamase, class-A RAM_26100 IPR012338 Beta-lactamase/transpeptidase-like RAM_26105 IPR029039 Flavoprotein-like superfamily RAM_26105 IPR003680 Flavodoxin-like fold RAM_26120 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal RAM_26120 IPR000639 Epoxide hydrolase-like RAM_26120 IPR000073 Alpha/beta hydrolase fold-1 RAM_26120 IPR029058 Alpha/Beta hydrolase fold RAM_26125 IPR002938 FAD-binding domain RAM_26125 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_26155 IPR000073 Alpha/beta hydrolase fold-1 RAM_26155 IPR029058 Alpha/Beta hydrolase fold RAM_26155 IPR000639 Epoxide hydrolase-like RAM_26155 IPR023594 Haloalkane dehalogenase, subfamily 2 RAM_26160 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_26160 IPR001647 DNA-binding HTH domain, TetR-type RAM_26160 IPR009057 Homeobox-like domain superfamily RAM_26170 IPR036573 Carbohydrate-binding module superfamily 5/12 RAM_26170 IPR033116 Serine proteases, trypsin family, serine active site RAM_26170 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_26170 IPR003610 Carbohydrate-binding module family 5/12 RAM_26170 IPR004236 Peptidase S1A, alpha-lytic prodomain RAM_26170 IPR035070 Streptogrisin prodomain RAM_26170 IPR009003 Peptidase S1, PA clan RAM_26170 IPR001316 Peptidase S1A, streptogrisin RAM_26205 IPR036457 PPM-type phosphatase domain superfamily RAM_26205 IPR003660 HAMP domain RAM_26205 IPR001932 PPM-type phosphatase domain RAM_26215 IPR000731 Sterol-sensing domain RAM_26215 IPR004869 Membrane transport protein MMPL domain RAM_26240 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic RAM_26240 IPR017716 S-adenosylmethionine decarboxylase proenzyme RAM_26240 IPR016067 S-adenosylmethionine decarboxylase, core RAM_26245 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RAM_26245 IPR029066 PLP-binding barrel RAM_26245 IPR002986 Diaminopimelate decarboxylase, LysA RAM_26245 IPR000183 Ornithine/DAP/Arg decarboxylase RAM_26245 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RAM_26245 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RAM_26245 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RAM_26245 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RAM_26295 IPR035909 Methylesterase CheB, C-terminal RAM_26295 IPR011006 CheY-like superfamily RAM_26295 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RAM_26295 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type RAM_26295 IPR001789 Signal transduction response regulator, receiver domain RAM_26300 IPR005467 Histidine kinase domain RAM_26300 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_26300 IPR003594 Histidine kinase/HSP90-like ATPase RAM_26300 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_26300 IPR003660 HAMP domain RAM_26300 IPR017202 Sensor histidine kinase LiaS/VraS RAM_26310 IPR011006 CheY-like superfamily RAM_26310 IPR016032 Signal transduction response regulator, C-terminal effector RAM_26310 IPR001789 Signal transduction response regulator, receiver domain RAM_26310 IPR000792 Transcription regulator LuxR, C-terminal RAM_26310 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_26325 IPR004323 Divalent ion tolerance protein, CutA RAM_26325 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RAM_26325 IPR011322 Nitrogen regulatory PII-like, alpha/beta RAM_26330 IPR013126 Heat shock protein 70 family RAM_26330 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily RAM_26330 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RAM_26330 IPR018181 Heat shock protein 70, conserved site RAM_26330 IPR012725 Chaperone DnaK RAM_26340 IPR022812 Dynamin superfamily RAM_26340 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_26345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_26345 IPR022812 Dynamin superfamily RAM_26365 IPR002938 FAD-binding domain RAM_26365 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_26370 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain RAM_26370 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily RAM_26370 IPR006158 Cobalamin (vitamin B12)-binding domain RAM_26370 IPR036724 Cobalamin-binding domain superfamily RAM_26370 IPR011005 Dihydropteroate synthase-like RAM_26370 IPR003726 Homocysteine-binding domain RAM_26370 IPR033706 Methionine synthase, B12-binding domain RAM_26370 IPR011822 Cobalamin-dependent methionine synthase RAM_26370 IPR036594 Methionine synthase domain RAM_26370 IPR000489 Pterin-binding domain RAM_26370 IPR004223 Vitamin B12-dependent methionine synthase, activation domain RAM_26370 IPR036589 Homocysteine-binding domain superfamily RAM_26375 IPR036661 Luciferase-like domain superfamily RAM_26375 IPR011251 Luciferase-like domain RAM_26375 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted RAM_26380 IPR005829 Sugar transporter, conserved site RAM_26380 IPR003663 Sugar/inositol transporter RAM_26380 IPR036259 MFS transporter superfamily RAM_26380 IPR005828 Major facilitator, sugar transporter-like RAM_26380 IPR020846 Major facilitator superfamily domain RAM_26385 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_26385 IPR015943 WD40/YVTN repeat-like-containing domain superfamily RAM_26385 IPR014756 Immunoglobulin E-set RAM_26385 IPR013783 Immunoglobulin-like fold RAM_26385 IPR036966 Carbohydrate-binding module 3 superfamily RAM_26385 IPR001956 Carbohydrate-binding module 3 RAM_26385 IPR005102 Carbohydrate binding X2 domain RAM_26390 IPR013149 Alcohol dehydrogenase, C-terminal RAM_26390 IPR036291 NAD(P)-binding domain superfamily RAM_26390 IPR011032 GroES-like superfamily RAM_26390 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_26390 IPR013154 Alcohol dehydrogenase, N-terminal RAM_26390 IPR020843 Polyketide synthase, enoylreductase domain RAM_26415 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_26415 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_26415 IPR001547 Glycoside hydrolase, family 5 RAM_26415 IPR017853 Glycoside hydrolase superfamily RAM_26415 IPR001919 Carbohydrate-binding type-2 domain RAM_26415 IPR018087 Glycoside hydrolase, family 5, conserved site RAM_26420 IPR023210 NADP-dependent oxidoreductase domain RAM_26420 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_26425 IPR008928 Six-hairpin glycosidase superfamily RAM_26425 IPR030875 Sulfoquinovose isomerase RAM_26425 IPR034116 AGE domain RAM_26425 IPR012341 Six-hairpin glycosidase-like superfamily RAM_26430 IPR001919 Carbohydrate-binding type-2 domain RAM_26430 IPR014756 Immunoglobulin E-set RAM_26430 IPR004302 Cellulose/chitin-binding protein, N-terminal RAM_26430 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_26430 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_26435 IPR000843 LacI-type HTH domain RAM_26435 IPR028082 Periplasmic binding protein-like I RAM_26435 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_26445 IPR001919 Carbohydrate-binding type-2 domain RAM_26445 IPR013783 Immunoglobulin-like fold RAM_26445 IPR001524 Glycoside hydrolase, family 6, conserved site RAM_26445 IPR036116 Fibronectin type III superfamily RAM_26445 IPR018366 Carbohydrate-binding type-2, conserved site RAM_26445 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_26445 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_26445 IPR036434 1, 4-beta cellobiohydrolase superfamily RAM_26445 IPR016288 1, 4-beta cellobiohydrolase RAM_26445 IPR003961 Fibronectin type III RAM_26450 IPR017853 Glycoside hydrolase superfamily RAM_26450 IPR018087 Glycoside hydrolase, family 5, conserved site RAM_26450 IPR001547 Glycoside hydrolase, family 5 RAM_26450 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_26450 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_26450 IPR001919 Carbohydrate-binding type-2 domain RAM_26455 IPR023309 Endoglucanase F, domain 2 RAM_26455 IPR001919 Carbohydrate-binding type-2 domain RAM_26455 IPR008928 Six-hairpin glycosidase superfamily RAM_26455 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_26455 IPR018366 Carbohydrate-binding type-2, conserved site RAM_26455 IPR000556 Glycoside hydrolase, 48F RAM_26455 IPR013783 Immunoglobulin-like fold RAM_26455 IPR012341 Six-hairpin glycosidase-like superfamily RAM_26455 IPR027390 Endoglucanase F, domain 3 RAM_26455 IPR036116 Fibronectin type III superfamily RAM_26455 IPR003961 Fibronectin type III RAM_26455 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_26460 IPR028082 Periplasmic binding protein-like I RAM_26460 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_26460 IPR000843 LacI-type HTH domain RAM_26470 IPR035906 MetI-like superfamily RAM_26470 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_26475 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_26475 IPR035906 MetI-like superfamily RAM_26480 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RAM_26480 IPR018120 Glycoside hydrolase family 1, active site RAM_26480 IPR001360 Glycoside hydrolase family 1 RAM_26480 IPR017853 Glycoside hydrolase superfamily RAM_26480 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase RAM_26485 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RAM_26485 IPR042096 Dihydroxy-acid dehydratase, C-terminal RAM_26485 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RAM_26485 IPR037237 IlvD/EDD, N-terminal domain RAM_26495 IPR000644 CBS domain RAM_26500 IPR036895 Uracil-DNA glycosylase-like domain superfamily RAM_26500 IPR005122 Uracil-DNA glycosylase-like RAM_26500 IPR005273 Uracil-DNA glycosylase family 4 RAM_26505 IPR014144 DNA ligase D, 3'-phosphoesterase domain RAM_26505 IPR014145 DNA ligase D, polymerase domain RAM_26505 IPR014146 DNA ligase D, ligase domain RAM_26505 IPR012310 DNA ligase, ATP-dependent, central RAM_26505 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_26505 IPR033649 LigD polymerase domain, MtLigD-type RAM_26505 IPR012340 Nucleic acid-binding, OB-fold RAM_26510 IPR012310 DNA ligase, ATP-dependent, central RAM_26510 IPR014146 DNA ligase D, ligase domain RAM_26510 IPR014144 DNA ligase D, 3'-phosphoesterase domain RAM_26510 IPR014145 DNA ligase D, polymerase domain RAM_26510 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_26510 IPR012340 Nucleic acid-binding, OB-fold RAM_26510 IPR033649 LigD polymerase domain, MtLigD-type RAM_26515 IPR011112 Rho termination factor, N-terminal RAM_26515 IPR016194 SPOC-like, C-terminal domain superfamily RAM_26515 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RAM_26515 IPR006164 Ku70/Ku80 beta-barrel domain RAM_26540 IPR036661 Luciferase-like domain superfamily RAM_26540 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted RAM_26540 IPR011251 Luciferase-like domain RAM_26550 IPR010193 Serine-protein kinase RsbW RAM_26550 IPR003594 Histidine kinase/HSP90-like ATPase RAM_26550 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_26555 IPR000943 RNA polymerase sigma-70 RAM_26555 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_26555 IPR014322 RNA polymerase sigma-B/F/G type RAM_26555 IPR007630 RNA polymerase sigma-70 region 4 RAM_26555 IPR014284 RNA polymerase sigma-70 like domain RAM_26555 IPR007627 RNA polymerase sigma-70 region 2 RAM_26555 IPR013325 RNA polymerase sigma factor, region 2 RAM_26555 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_26555 IPR007624 RNA polymerase sigma-70 region 3 RAM_26560 IPR007899 CHAD domain RAM_26560 IPR038186 CHAD domain superfamily RAM_26560 IPR033469 CYTH-like domain superfamily RAM_26560 IPR023577 CYTH domain RAM_26580 IPR023393 START-like domain superfamily RAM_26580 IPR005031 Coenzyme Q-binding protein COQ10, START domain RAM_26615 IPR005119 LysR, substrate-binding RAM_26615 IPR000847 Transcription regulator HTH, LysR RAM_26615 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_26615 IPR036390 Winged helix DNA-binding domain superfamily RAM_26620 IPR000183 Ornithine/DAP/Arg decarboxylase RAM_26620 IPR029066 PLP-binding barrel RAM_26620 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RAM_26620 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RAM_26620 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RAM_26620 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RAM_26620 IPR002986 Diaminopimelate decarboxylase, LysA RAM_26645 IPR020846 Major facilitator superfamily domain RAM_26645 IPR005828 Major facilitator, sugar transporter-like RAM_26645 IPR036259 MFS transporter superfamily RAM_26645 IPR005829 Sugar transporter, conserved site RAM_26645 IPR011701 Major facilitator superfamily RAM_26645 IPR004736 MFS transporter, metabolite:H symporter RAM_26650 IPR006464 N-acetyltransferase RimI/Ard1 RAM_26650 IPR000182 GNAT domain RAM_26650 IPR016181 Acyl-CoA N-acyltransferase RAM_26660 IPR008727 PAAR motif RAM_26660 IPR031325 RHS repeat RAM_26660 IPR006530 YD repeat RAM_26660 IPR022385 Rhs repeat-associated core RAM_26710 IPR005107 CO dehydrogenase flavoprotein, C-terminal RAM_26710 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_26710 IPR016166 FAD-binding domain, PCMH-type RAM_26710 IPR036318 FAD-binding, type PCMH-like superfamily RAM_26710 IPR016167 FAD-binding, type PCMH, subdomain 1 RAM_26710 IPR002346 Molybdopterin dehydrogenase, FAD-binding RAM_26710 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily RAM_26715 IPR036884 [2Fe-2S]-binding domain superfamily RAM_26715 IPR002888 [2Fe-2S]-binding RAM_26715 IPR012675 Beta-grasp domain superfamily RAM_26715 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_26715 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_26720 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead RAM_26720 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily RAM_26720 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding RAM_26720 IPR012780 Carbon-monoxide dehydrogenase, large subunit RAM_26720 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily RAM_26740 IPR028082 Periplasmic binding protein-like I RAM_26740 IPR000843 LacI-type HTH domain RAM_26740 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_26750 IPR000757 Glycoside hydrolase family 16 RAM_26750 IPR008263 Glycoside hydrolase, family 16, active site RAM_26750 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RAM_26755 IPR012334 Pectin lyase fold RAM_26760 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase RAM_26760 IPR002938 FAD-binding domain RAM_26760 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_26765 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_26765 IPR001018 Beta-lactamase, class-B, conserved site RAM_26765 IPR001279 Metallo-beta-lactamase RAM_26775 IPR036144 RibA-like superfamily RAM_26775 IPR000926 GTP cyclohydrolase II, RibA RAM_26775 IPR032677 GTP cyclohydrolase II RAM_26790 IPR036775 DNA polymerase, Y-family, little finger domain superfamily RAM_26790 IPR017961 DNA polymerase, Y-family, little finger domain RAM_26790 IPR022880 DNA polymerase IV RAM_26790 IPR001126 UmuC domain RAM_26805 IPR016181 Acyl-CoA N-acyltransferase RAM_26805 IPR000182 GNAT domain RAM_26805 IPR006464 N-acetyltransferase RimI/Ard1 RAM_26810 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RAM_26810 IPR042172 Adenosylhomocysteinase-like superfamily RAM_26810 IPR000043 Adenosylhomocysteinase-like RAM_26810 IPR036291 NAD(P)-binding domain superfamily RAM_26810 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site RAM_26825 IPR009187 Non-homologous end joining protein Ku, prokaryotic type RAM_26825 IPR006164 Ku70/Ku80 beta-barrel domain RAM_26825 IPR016194 SPOC-like, C-terminal domain superfamily RAM_26845 IPR004942 Roadblock/LAMTOR2 domain RAM_26850 IPR003594 Histidine kinase/HSP90-like ATPase RAM_26850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_26850 IPR012292 Globin/Protoglobin RAM_26850 IPR009050 Globin-like superfamily RAM_26850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_26850 IPR005467 Histidine kinase domain RAM_26850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_26850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_26850 IPR039379 Protoglobin, globin sensor domain RAM_26860 IPR011527 ABC transporter type 1, transmembrane domain RAM_26860 IPR003439 ABC transporter-like RAM_26860 IPR039421 Type I protein exporter RAM_26860 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_26860 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_26860 IPR017871 ABC transporter, conserved site RAM_26860 IPR003593 AAA+ ATPase domain RAM_26865 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_26865 IPR039421 Type I protein exporter RAM_26865 IPR017871 ABC transporter, conserved site RAM_26865 IPR003593 AAA+ ATPase domain RAM_26865 IPR011527 ABC transporter type 1, transmembrane domain RAM_26865 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_26865 IPR003439 ABC transporter-like RAM_26870 IPR014146 DNA ligase D, ligase domain RAM_26870 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_26870 IPR033649 LigD polymerase domain, MtLigD-type RAM_26870 IPR012310 DNA ligase, ATP-dependent, central RAM_26870 IPR014144 DNA ligase D, 3'-phosphoesterase domain RAM_26870 IPR012340 Nucleic acid-binding, OB-fold RAM_26870 IPR014145 DNA ligase D, polymerase domain RAM_26885 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_26885 IPR019734 Tetratricopeptide repeat RAM_26885 IPR013026 Tetratricopeptide repeat-containing domain RAM_26885 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_26885 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_26885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_26885 IPR016032 Signal transduction response regulator, C-terminal effector RAM_26885 IPR002182 NB-ARC RAM_26885 IPR005158 Bacterial transcriptional activator domain RAM_26890 IPR029062 Class I glutamine amidotransferase-like RAM_26890 IPR002818 DJ-1/PfpI RAM_26895 IPR029062 Class I glutamine amidotransferase-like RAM_26895 IPR002818 DJ-1/PfpI RAM_26910 IPR001279 Metallo-beta-lactamase RAM_26910 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_26935 IPR012799 Fatty oxidation complex, alpha subunit FadB RAM_26935 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RAM_26935 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_26935 IPR029045 ClpP/crotonase-like domain superfamily RAM_26935 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_26935 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_26935 IPR001753 Enoyl-CoA hydratase/isomerase RAM_26935 IPR036291 NAD(P)-binding domain superfamily RAM_26935 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_26940 IPR000073 Alpha/beta hydrolase fold-1 RAM_26940 IPR029058 Alpha/Beta hydrolase fold RAM_26940 IPR000639 Epoxide hydrolase-like RAM_26965 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_26965 IPR023512 Deaminase MtaD/DadD RAM_26965 IPR006680 Amidohydrolase-related RAM_26965 IPR032466 Metal-dependent hydrolase RAM_26970 IPR007685 RelA/SpoT RAM_26970 IPR004095 TGS RAM_26970 IPR004811 RelA/SpoT family RAM_26970 IPR033655 RelA, TGS domain RAM_26970 IPR012676 TGS-like RAM_26970 IPR002912 ACT domain RAM_26970 IPR012675 Beta-grasp domain superfamily RAM_26970 IPR003607 HD/PDEase domain RAM_26975 IPR000836 Phosphoribosyltransferase domain RAM_26975 IPR005764 Adenine phosphoribosyl transferase RAM_26975 IPR029057 Phosphoribosyltransferase-like RAM_26980 IPR005665 Protein-export membrane protein SecF, bacterial RAM_26980 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RAM_26980 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RAM_26980 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RAM_26985 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RAM_26985 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RAM_26985 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RAM_26985 IPR005791 Protein translocase subunit SecD RAM_26990 IPR003849 Preprotein translocase YajC RAM_26995 IPR041445 RuvB, AAA lid domain RAM_26995 IPR036390 Winged helix DNA-binding domain superfamily RAM_26995 IPR008823 RuvB C-terminal winged helix domain RAM_26995 IPR008824 RuvB-like P-loop domain RAM_26995 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_26995 IPR004605 DNA helicase, Holliday junction RuvB-type RAM_26995 IPR003593 AAA+ ATPase domain RAM_26995 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_27000 IPR010994 RuvA domain 2-like RAM_27000 IPR036267 RuvA, C-terminal domain superfamily RAM_27000 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial RAM_27000 IPR000085 Bacterial DNA recombination protein RuvA RAM_27000 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RAM_27000 IPR012340 Nucleic acid-binding, OB-fold RAM_27000 IPR011114 Holliday junction DNA helicase RuvA, C-terminal RAM_27005 IPR036397 Ribonuclease H superfamily RAM_27005 IPR002176 Crossover junction endodeoxyribonuclease RuvC RAM_27005 IPR012337 Ribonuclease H-like superfamily RAM_27005 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site RAM_27020 IPR029072 YebC-like RAM_27020 IPR026564 Transcriptional regulator TACO1-like, domain 3 RAM_27020 IPR002876 Transcriptional regulator TACO1-like RAM_27020 IPR017856 Integrase-like, N-terminal RAM_27025 IPR029062 Class I glutamine amidotransferase-like RAM_27025 IPR021196 PdxT/SNO family, conserved site RAM_27025 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO RAM_27040 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain RAM_27040 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_27040 IPR001387 Cro/C1-type helix-turn-helix domain RAM_27040 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily RAM_27045 IPR039651 Protein FixC-like RAM_27045 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_27045 IPR002938 FAD-binding domain RAM_27050 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_27050 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_27050 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_27050 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_27050 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_27050 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_27050 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_27055 IPR042099 AMP-dependent synthetase-like superfamily RAM_27055 IPR000873 AMP-dependent synthetase/ligase RAM_27055 IPR020845 AMP-binding, conserved site RAM_27055 IPR025110 AMP-binding enzyme, C-terminal domain RAM_27055 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_27055 IPR010060 Non-ribosomal peptide synthase RAM_27055 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_27055 IPR001242 Condensation domain RAM_27055 IPR010071 Amino acid adenylation domain RAM_27055 IPR009081 Phosphopantetheine binding ACP domain RAM_27055 IPR006162 Phosphopantetheine attachment site RAM_27055 IPR036736 ACP-like superfamily RAM_27070 IPR033755 PdxS/SNZ N-terminal domain RAM_27070 IPR013785 Aldolase-type TIM barrel RAM_27070 IPR011060 Ribulose-phosphate binding barrel RAM_27070 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ RAM_27080 IPR012951 Berberine/berberine-like RAM_27080 IPR016166 FAD-binding domain, PCMH-type RAM_27080 IPR016167 FAD-binding, type PCMH, subdomain 1 RAM_27080 IPR006094 FAD linked oxidase, N-terminal RAM_27080 IPR036318 FAD-binding, type PCMH-like superfamily RAM_27085 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_27085 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_27085 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_27085 IPR009000 Translation protein, beta-barrel domain superfamily RAM_27085 IPR000795 Transcription factor, GTP-binding domain RAM_27085 IPR004161 Translation elongation factor EFTu-like, domain 2 RAM_27085 IPR000640 Elongation factor EFG, domain V-like RAM_27085 IPR005225 Small GTP-binding protein domain RAM_27085 IPR035649 EFG, domain V RAM_27085 IPR041095 Elongation Factor G, domain II RAM_27085 IPR035647 EF-G domain III/V-like RAM_27085 IPR009022 Elongation factor G, domain III RAM_27085 IPR005517 Translation elongation factor EFG/EF2, domain IV RAM_27090 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family RAM_27090 IPR003777 XdhC- CoxI RAM_27090 IPR027051 XdhC Rossmann domain RAM_27110 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_27115 IPR004960 Bacterial lipid A biosynthesis acyltransferase RAM_27130 IPR039383 FHIT family RAM_27130 IPR001310 Histidine triad (HIT) protein RAM_27130 IPR011146 HIT-like domain RAM_27130 IPR036265 HIT-like superfamily RAM_27135 IPR033728 Threonine-tRNA ligase catalytic core domain RAM_27135 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RAM_27135 IPR004095 TGS RAM_27135 IPR036621 Anticodon-binding domain superfamily RAM_27135 IPR004154 Anticodon-binding RAM_27135 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_27135 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily RAM_27135 IPR002320 Threonine-tRNA ligase, class IIa RAM_27135 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RAM_27140 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE RAM_27140 IPR000415 Nitroreductase-like RAM_27140 IPR029479 Nitroreductase RAM_27145 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP RAM_27145 IPR003362 Bacterial sugar transferase RAM_27145 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase RAM_27150 IPR006776 Sporulation-specific cell division protein SsgB RAM_27150 IPR038658 Sporulation-specific cell division protein SsgB superfamily RAM_27160 IPR024412 Lsr2 RAM_27160 IPR042261 Lsr2, dimerization domain RAM_27160 IPR042254 Lsr2, DNA binding domain RAM_27165 IPR001940 Peptidase S1C RAM_27165 IPR036034 PDZ superfamily RAM_27165 IPR001478 PDZ domain RAM_27165 IPR011782 Peptidase S1C, Do RAM_27165 IPR009003 Peptidase S1, PA clan RAM_27170 IPR011546 Peptidase M41, FtsH extracellular RAM_27170 IPR037219 Peptidase M41-like RAM_27170 IPR041569 AAA ATPase, AAA+ lid domain RAM_27170 IPR003959 ATPase, AAA-type, core RAM_27170 IPR003960 ATPase, AAA-type, conserved site RAM_27170 IPR005936 Peptidase, FtsH RAM_27170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_27170 IPR003593 AAA+ ATPase domain RAM_27170 IPR000642 Peptidase M41 RAM_27180 IPR005524 Predicted permease DUF318 RAM_27200 IPR011283 Acetoacetyl-CoA reductase RAM_27200 IPR036291 NAD(P)-binding domain superfamily RAM_27200 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_27200 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_27205 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_27205 IPR029045 ClpP/crotonase-like domain superfamily RAM_27205 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_27205 IPR001753 Enoyl-CoA hydratase/isomerase RAM_27210 IPR020845 AMP-binding, conserved site RAM_27210 IPR025110 AMP-binding enzyme, C-terminal domain RAM_27210 IPR042099 AMP-dependent synthetase-like superfamily RAM_27210 IPR000873 AMP-dependent synthetase/ligase RAM_27215 IPR029058 Alpha/Beta hydrolase fold RAM_27215 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain RAM_27215 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal RAM_27215 IPR005674 CocE/Serine esterase RAM_27215 IPR008979 Galactose-binding-like domain superfamily RAM_27225 IPR017439 Amidohydrolase RAM_27225 IPR036264 Bacterial exopeptidase dimerisation domain RAM_27225 IPR002933 Peptidase M20 RAM_27225 IPR011650 Peptidase M20, dimerisation domain RAM_27240 IPR026912 Adenine deaminase C-terminal domain RAM_27240 IPR006679 Adenine deaminase RAM_27240 IPR032466 Metal-dependent hydrolase RAM_27240 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_27240 IPR006680 Amidohydrolase-related RAM_27255 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RAM_27255 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_27255 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RAM_27255 IPR027424 Glucose Oxidase, domain 2 RAM_27255 IPR012132 Glucose-methanol-choline oxidoreductase RAM_27265 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_27265 IPR002938 FAD-binding domain RAM_27265 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase RAM_27275 IPR042099 AMP-dependent synthetase-like superfamily RAM_27275 IPR000873 AMP-dependent synthetase/ligase RAM_27275 IPR020845 AMP-binding, conserved site RAM_27275 IPR025110 AMP-binding enzyme, C-terminal domain RAM_27300 IPR001647 DNA-binding HTH domain, TetR-type RAM_27300 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_27300 IPR009057 Homeobox-like domain superfamily RAM_27300 IPR011075 Tetracyclin repressor-like, C-terminal domain RAM_27350 IPR006236 D-3-phosphoglycerate dehydrogenase RAM_27350 IPR036291 NAD(P)-binding domain superfamily RAM_27350 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RAM_27350 IPR029009 Allosteric substrate binding domain superfamily RAM_27350 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RAM_27350 IPR002912 ACT domain RAM_27350 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RAM_27350 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RAM_27355 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_27355 IPR035906 MetI-like superfamily RAM_27360 IPR035906 MetI-like superfamily RAM_27360 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_27370 IPR028082 Periplasmic binding protein-like I RAM_27370 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_27370 IPR000843 LacI-type HTH domain RAM_27375 IPR023753 FAD/NAD(P)-binding domain RAM_27375 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_27385 IPR020846 Major facilitator superfamily domain RAM_27385 IPR036259 MFS transporter superfamily RAM_27385 IPR005829 Sugar transporter, conserved site RAM_27385 IPR036390 Winged helix DNA-binding domain superfamily RAM_27385 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_27385 IPR011701 Major facilitator superfamily RAM_27385 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RAM_27390 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_27390 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_27390 IPR036291 NAD(P)-binding domain superfamily RAM_27400 IPR013572 Transcription regulator MAATS, C-terminal RAM_27400 IPR001647 DNA-binding HTH domain, TetR-type RAM_27400 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_27400 IPR009057 Homeobox-like domain superfamily RAM_27400 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_27445 IPR018043 Sodium:galactoside symporter, conserved site RAM_27445 IPR036259 MFS transporter superfamily RAM_27445 IPR039672 Lactose permease-like RAM_27450 IPR036390 Winged helix DNA-binding domain superfamily RAM_27450 IPR000524 Transcription regulator HTH, GntR RAM_27450 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_27450 IPR011711 GntR, C-terminal RAM_27450 IPR000485 AsnC-type HTH domain RAM_27450 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_27470 IPR016181 Acyl-CoA N-acyltransferase RAM_27470 IPR024170 Aminoglycoside N6-acetyltransferase RAM_27470 IPR000182 GNAT domain RAM_27490 IPR012132 Glucose-methanol-choline oxidoreductase RAM_27490 IPR027424 Glucose Oxidase, domain 2 RAM_27490 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RAM_27490 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RAM_27490 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_27490 IPR011533 Oxygen-dependent choline dehydrogenase RAM_27495 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form RAM_27495 IPR005835 Nucleotidyl transferase domain RAM_27495 IPR029044 Nucleotide-diphospho-sugar transferases RAM_27500 IPR042099 AMP-dependent synthetase-like superfamily RAM_27500 IPR000873 AMP-dependent synthetase/ligase RAM_27500 IPR018201 Beta-ketoacyl synthase, active site RAM_27500 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_27500 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_27500 IPR010071 Amino acid adenylation domain RAM_27500 IPR036736 ACP-like superfamily RAM_27500 IPR020845 AMP-binding, conserved site RAM_27500 IPR025110 AMP-binding enzyme, C-terminal domain RAM_27500 IPR005814 Aminotransferase class-III RAM_27500 IPR006162 Phosphopantetheine attachment site RAM_27500 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_27500 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_27500 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_27500 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_27500 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_27500 IPR009081 Phosphopantetheine binding ACP domain RAM_27500 IPR015424 Pyridoxal phosphate-dependent transferase RAM_27500 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_27500 IPR016039 Thiolase-like RAM_27500 IPR001242 Condensation domain RAM_27520 IPR010610 Domain of unknown function DUF1205 RAM_27520 IPR030953 Glycosyltransferase, activator-dependent family RAM_27530 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like RAM_27530 IPR004981 Tryptophan 2,3-dioxygenase RAM_27540 IPR005212 NDP-hexose 2,3-dehydratase RAM_27540 IPR038153 NDP-hexose 2,3-dehydratase-like superfamily RAM_27545 IPR011006 CheY-like superfamily RAM_27545 IPR016032 Signal transduction response regulator, C-terminal effector RAM_27545 IPR001789 Signal transduction response regulator, receiver domain RAM_27545 IPR000792 Transcription regulator LuxR, C-terminal RAM_27550 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_27550 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_27550 IPR003594 Histidine kinase/HSP90-like ATPase RAM_27560 IPR017871 ABC transporter, conserved site RAM_27560 IPR005978 Nodulation ABC transporter, NodI RAM_27560 IPR015851 ABC transporter, NodI RAM_27560 IPR003439 ABC transporter-like RAM_27560 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_27560 IPR003593 AAA+ ATPase domain RAM_27570 IPR040800 Methyltransferase MycE, N-terminal RAM_27570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_27575 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_27575 IPR001031 Thioesterase RAM_27575 IPR000873 AMP-dependent synthetase/ligase RAM_27575 IPR020845 AMP-binding, conserved site RAM_27575 IPR009081 Phosphopantetheine binding ACP domain RAM_27575 IPR010071 Amino acid adenylation domain RAM_27575 IPR020802 Polyketide synthase, thioesterase domain RAM_27575 IPR042099 AMP-dependent synthetase-like superfamily RAM_27575 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_27575 IPR036736 ACP-like superfamily RAM_27575 IPR029058 Alpha/Beta hydrolase fold RAM_27575 IPR001242 Condensation domain RAM_27575 IPR025110 AMP-binding enzyme, C-terminal domain RAM_27580 IPR030953 Glycosyltransferase, activator-dependent family RAM_27580 IPR010610 Domain of unknown function DUF1205 RAM_27585 IPR030953 Glycosyltransferase, activator-dependent family RAM_27585 IPR010610 Domain of unknown function DUF1205 RAM_27590 IPR030953 Glycosyltransferase, activator-dependent family RAM_27590 IPR010610 Domain of unknown function DUF1205 RAM_27595 IPR030953 Glycosyltransferase, activator-dependent family RAM_27595 IPR010610 Domain of unknown function DUF1205 RAM_27600 IPR010610 Domain of unknown function DUF1205 RAM_27600 IPR030953 Glycosyltransferase, activator-dependent family RAM_27610 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_27610 IPR003593 AAA+ ATPase domain RAM_27610 IPR003439 ABC transporter-like RAM_27610 IPR025302 Domain of unknown function DUF4162 RAM_27610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_27610 IPR017871 ABC transporter, conserved site RAM_27615 IPR010233 Ubiquinone biosynthesis O-methyltransferase RAM_27615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_27620 IPR010610 Domain of unknown function DUF1205 RAM_27620 IPR030953 Glycosyltransferase, activator-dependent family RAM_27625 IPR030953 Glycosyltransferase, activator-dependent family RAM_27625 IPR010610 Domain of unknown function DUF1205 RAM_27630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_27630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_27630 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase RAM_27630 IPR015424 Pyridoxal phosphate-dependent transferase RAM_27635 IPR005158 Bacterial transcriptional activator domain RAM_27635 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_27635 IPR016032 Signal transduction response regulator, C-terminal effector RAM_27635 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_27635 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_27640 IPR030953 Glycosyltransferase, activator-dependent family RAM_27640 IPR010610 Domain of unknown function DUF1205 RAM_27645 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding RAM_27645 IPR036637 Phosphohistidine domain superfamily RAM_27645 IPR008279 PEP-utilising enzyme, mobile domain RAM_27645 IPR013815 ATP-grasp fold, subdomain 1 RAM_27650 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_27650 IPR036291 NAD(P)-binding domain superfamily RAM_27650 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RAM_27650 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RAM_27650 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RAM_27650 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RAM_27650 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_27660 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_27660 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_27660 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_27660 IPR036291 NAD(P)-binding domain superfamily RAM_27680 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_27680 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_27680 IPR036291 NAD(P)-binding domain superfamily RAM_27680 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_27690 IPR023393 START-like domain superfamily RAM_27690 IPR005031 Coenzyme Q-binding protein COQ10, START domain RAM_27695 IPR036736 ACP-like superfamily RAM_27695 IPR006162 Phosphopantetheine attachment site RAM_27695 IPR009081 Phosphopantetheine binding ACP domain RAM_27700 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_27700 IPR016039 Thiolase-like RAM_27700 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_27700 IPR000794 Beta-ketoacyl synthase RAM_27700 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_27705 IPR016039 Thiolase-like RAM_27705 IPR000794 Beta-ketoacyl synthase RAM_27705 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_27705 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_27705 IPR018201 Beta-ketoacyl synthase, active site RAM_27705 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_27710 IPR016672 Polyketide biosynthesis protein CurC, predicted RAM_27710 IPR014710 RmlC-like jelly roll fold RAM_27710 IPR013096 Cupin 2, conserved barrel RAM_27710 IPR011051 RmlC-like cupin domain superfamily RAM_27715 IPR011008 Dimeric alpha-beta barrel RAM_27715 IPR038474 Polyketide synthesis cyclase superfamily RAM_27715 IPR006765 Polyketide synthesis cyclase RAM_27725 IPR000109 Proton-dependent oligopeptide transporter family RAM_27725 IPR036259 MFS transporter superfamily RAM_27725 IPR020846 Major facilitator superfamily domain RAM_27725 IPR005279 Dipeptide/tripeptide permease RAM_27725 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site RAM_27730 IPR016461 O-methyltransferase COMT-type RAM_27730 IPR001077 O-methyltransferase domain RAM_27730 IPR036390 Winged helix DNA-binding domain superfamily RAM_27730 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_27730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_27730 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain RAM_27735 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_27735 IPR002938 FAD-binding domain RAM_27740 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_27740 IPR002938 FAD-binding domain RAM_27750 IPR036661 Luciferase-like domain superfamily RAM_27750 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted RAM_27750 IPR011251 Luciferase-like domain RAM_27755 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_27755 IPR011283 Acetoacetyl-CoA reductase RAM_27755 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_27755 IPR036291 NAD(P)-binding domain superfamily RAM_27760 IPR017972 Cytochrome P450, conserved site RAM_27760 IPR036396 Cytochrome P450 superfamily RAM_27760 IPR002397 Cytochrome P450, B-class RAM_27760 IPR001128 Cytochrome P450 RAM_27765 IPR000683 Oxidoreductase, N-terminal RAM_27765 IPR036291 NAD(P)-binding domain superfamily RAM_27775 IPR036291 NAD(P)-binding domain superfamily RAM_27775 IPR016040 NAD(P)-binding domain RAM_27780 IPR001509 NAD-dependent epimerase/dehydratase RAM_27780 IPR036291 NAD(P)-binding domain superfamily RAM_27795 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_27795 IPR000792 Transcription regulator LuxR, C-terminal RAM_27795 IPR016032 Signal transduction response regulator, C-terminal effector RAM_27795 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_27795 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_27800 IPR001826 RHS protein RAM_27800 IPR022385 Rhs repeat-associated core RAM_27815 IPR000415 Nitroreductase-like RAM_27825 IPR011991 ArsR-like helix-turn-helix domain RAM_27825 IPR001845 HTH ArsR-type DNA-binding domain RAM_27825 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_27825 IPR036390 Winged helix DNA-binding domain superfamily RAM_27830 IPR011547 SLC26A/SulP transporter domain RAM_27830 IPR001902 SLC26A/SulP transporter RAM_27830 IPR002645 STAS domain RAM_27830 IPR036513 STAS domain superfamily RAM_27845 IPR006016 UspA RAM_27845 IPR006015 Universal stress protein A family RAM_27855 IPR000415 Nitroreductase-like RAM_27865 IPR004014 Cation-transporting P-type ATPase, N-terminal RAM_27865 IPR023299 P-type ATPase, cytoplasmic domain N RAM_27865 IPR023214 HAD superfamily RAM_27865 IPR001757 P-type ATPase RAM_27865 IPR006068 Cation-transporting P-type ATPase, C-terminal RAM_27865 IPR023298 P-type ATPase, transmembrane domain superfamily RAM_27865 IPR008250 P-type ATPase, A domain superfamily RAM_27865 IPR036412 HAD-like superfamily RAM_27865 IPR018303 P-type ATPase, phosphorylation site RAM_27880 IPR004372 Acetate/propionate kinase RAM_27880 IPR000890 Aliphatic acid kinase, short-chain RAM_27880 IPR023865 Aliphatic acid kinase, short-chain, conserved site RAM_27885 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain RAM_27885 IPR016102 Succinyl-CoA synthetase-like RAM_27885 IPR036291 NAD(P)-binding domain superfamily RAM_27885 IPR000182 GNAT domain RAM_27885 IPR003781 CoA-binding RAM_27885 IPR013815 ATP-grasp fold, subdomain 1 RAM_27885 IPR011761 ATP-grasp fold RAM_27885 IPR016181 Acyl-CoA N-acyltransferase RAM_27890 IPR003594 Histidine kinase/HSP90-like ATPase RAM_27890 IPR003018 GAF domain RAM_27890 IPR029016 GAF-like domain superfamily RAM_27890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_27890 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_27900 IPR016032 Signal transduction response regulator, C-terminal effector RAM_27900 IPR011006 CheY-like superfamily RAM_27900 IPR001789 Signal transduction response regulator, receiver domain RAM_27900 IPR000792 Transcription regulator LuxR, C-terminal RAM_27905 IPR002585 Cytochrome ubiquinol oxidase subunit 1 RAM_27910 IPR003317 Cytochrome ubiquinol oxidase subunit 2 RAM_27915 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_27915 IPR039421 Type I protein exporter RAM_27915 IPR017871 ABC transporter, conserved site RAM_27915 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_27915 IPR003439 ABC transporter-like RAM_27915 IPR011527 ABC transporter type 1, transmembrane domain RAM_27915 IPR003593 AAA+ ATPase domain RAM_27915 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD RAM_27920 IPR029061 Thiamin diphosphate-binding fold RAM_27920 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_27920 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase RAM_27920 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal RAM_27920 IPR023962 Probable phosphoketolase RAM_27920 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site RAM_27920 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site RAM_27920 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal RAM_27925 IPR006016 UspA RAM_27925 IPR006015 Universal stress protein A family RAM_27930 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily RAM_27930 IPR038076 MgtE, N-terminal domain superfamily RAM_27930 IPR006667 SLC41 divalent cation transporters, integral membrane domain RAM_27930 IPR006668 Magnesium transporter, MgtE intracellular domain RAM_27930 IPR038048 Magnesium transporter MgtE, transmembrane domain RAM_27930 IPR006669 Magnesium transporter MgtE RAM_27930 IPR000644 CBS domain RAM_27935 IPR006016 UspA RAM_27935 IPR006015 Universal stress protein A family RAM_27950 IPR006016 UspA RAM_27950 IPR006015 Universal stress protein A family RAM_27965 IPR006336 Glutamate--cysteine ligase, GCS2 RAM_27965 IPR011793 Putative glutamate--cysteine ligase YbdK RAM_27965 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_27980 IPR024747 Pyridoxamine 5'-phosphate oxidase-related RAM_27980 IPR012349 FMN-binding split barrel RAM_27990 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_27990 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_27995 IPR011006 CheY-like superfamily RAM_27995 IPR001789 Signal transduction response regulator, receiver domain RAM_27995 IPR016032 Signal transduction response regulator, C-terminal effector RAM_27995 IPR000792 Transcription regulator LuxR, C-terminal RAM_28010 IPR005467 Histidine kinase domain RAM_28010 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_28010 IPR017203 Signal transduction histidine kinase, NreB RAM_28010 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_28010 IPR003594 Histidine kinase/HSP90-like ATPase RAM_28010 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_28015 IPR000792 Transcription regulator LuxR, C-terminal RAM_28015 IPR001789 Signal transduction response regulator, receiver domain RAM_28015 IPR016032 Signal transduction response regulator, C-terminal effector RAM_28015 IPR011006 CheY-like superfamily RAM_28035 IPR004276 Glycosyltransferase family 28, N-terminal domain RAM_28040 IPR023187 Transcriptional regulator MarR-type, conserved site RAM_28040 IPR000835 MarR-type HTH domain RAM_28040 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28040 IPR036390 Winged helix DNA-binding domain superfamily RAM_28065 IPR017171 Signal transduction histidine kinase, MctS RAM_28065 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_28065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_28065 IPR003594 Histidine kinase/HSP90-like ATPase RAM_28065 IPR033480 Single Cache domain 2 RAM_28070 IPR001789 Signal transduction response regulator, receiver domain RAM_28070 IPR000792 Transcription regulator LuxR, C-terminal RAM_28070 IPR011006 CheY-like superfamily RAM_28070 IPR016032 Signal transduction response regulator, C-terminal effector RAM_28105 IPR019756 Peptidase S26A, signal peptidase I, serine active site RAM_28105 IPR019758 Peptidase S26A, signal peptidase I, conserved site RAM_28105 IPR036286 LexA/Signal peptidase-like superfamily RAM_28105 IPR019533 Peptidase S26 RAM_28105 IPR000223 Peptidase S26A, signal peptidase I RAM_28110 IPR036291 NAD(P)-binding domain superfamily RAM_28110 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_28110 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_28115 IPR001207 Transposase, mutator type RAM_28150 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_28150 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_28150 IPR036291 NAD(P)-binding domain superfamily RAM_28155 IPR036396 Cytochrome P450 superfamily RAM_28155 IPR017972 Cytochrome P450, conserved site RAM_28155 IPR001128 Cytochrome P450 RAM_28155 IPR002397 Cytochrome P450, B-class RAM_28175 IPR036661 Luciferase-like domain superfamily RAM_28175 IPR011251 Luciferase-like domain RAM_28180 IPR000101 Gamma-glutamyltranspeptidase RAM_28180 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_28185 IPR029787 Nucleotide cyclase RAM_28185 IPR000160 GGDEF domain RAM_28185 IPR035965 PAS domain superfamily RAM_28185 IPR013656 PAS fold-4 RAM_28185 IPR000014 PAS domain RAM_28185 IPR000700 PAS-associated, C-terminal RAM_28200 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_28200 IPR036291 NAD(P)-binding domain superfamily RAM_28200 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_28210 IPR036259 MFS transporter superfamily RAM_28210 IPR005829 Sugar transporter, conserved site RAM_28210 IPR020846 Major facilitator superfamily domain RAM_28210 IPR011701 Major facilitator superfamily RAM_28220 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RAM_28220 IPR029066 PLP-binding barrel RAM_28220 IPR000183 Ornithine/DAP/Arg decarboxylase RAM_28220 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RAM_28220 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RAM_28220 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RAM_28220 IPR002986 Diaminopimelate decarboxylase, LysA RAM_28235 IPR001173 Glycosyltransferase 2-like RAM_28235 IPR029044 Nucleotide-diphospho-sugar transferases RAM_28235 IPR027791 Galactosyltransferase, C-terminal RAM_28240 IPR001173 Glycosyltransferase 2-like RAM_28240 IPR029044 Nucleotide-diphospho-sugar transferases RAM_28245 IPR003593 AAA+ ATPase domain RAM_28245 IPR017871 ABC transporter, conserved site RAM_28245 IPR003439 ABC transporter-like RAM_28245 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_28245 IPR011917 ABC transporter, lipid A export, MsbA RAM_28245 IPR011527 ABC transporter type 1, transmembrane domain RAM_28245 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_28250 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_28250 IPR011917 ABC transporter, lipid A export, MsbA RAM_28250 IPR017871 ABC transporter, conserved site RAM_28250 IPR003593 AAA+ ATPase domain RAM_28250 IPR003439 ABC transporter-like RAM_28250 IPR011527 ABC transporter type 1, transmembrane domain RAM_28250 IPR039421 Type I protein exporter RAM_28250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_28270 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_28275 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_28275 IPR029058 Alpha/Beta hydrolase fold RAM_28275 IPR000639 Epoxide hydrolase-like RAM_28275 IPR016292 Epoxide hydrolase RAM_28275 IPR010497 Epoxide hydrolase, N-terminal RAM_28280 IPR013094 Alpha/beta hydrolase fold-3 RAM_28280 IPR029058 Alpha/Beta hydrolase fold RAM_28330 IPR020846 Major facilitator superfamily domain RAM_28330 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family RAM_28330 IPR036259 MFS transporter superfamily RAM_28330 IPR011701 Major facilitator superfamily RAM_28330 IPR005829 Sugar transporter, conserved site RAM_28345 IPR016032 Signal transduction response regulator, C-terminal effector RAM_28345 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_28345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_28345 IPR019734 Tetratricopeptide repeat RAM_28345 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28345 IPR005158 Bacterial transcriptional activator domain RAM_28345 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_28345 IPR002182 NB-ARC RAM_28345 IPR013026 Tetratricopeptide repeat-containing domain RAM_28355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_28355 IPR026669 Arsenite methyltransferase-like RAM_28355 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28355 IPR005149 Transcription regulator PadR, N-terminal RAM_28355 IPR036390 Winged helix DNA-binding domain superfamily RAM_28355 IPR025714 Methyltransferase domain RAM_28380 IPR016289 Endo-beta-N-acetylglucosaminidase RAM_28380 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_28380 IPR017853 Glycoside hydrolase superfamily RAM_28380 IPR001579 Glycoside hydrolase, chitinase active site RAM_28395 IPR029039 Flavoprotein-like superfamily RAM_28395 IPR005025 NADPH-dependent FMN reductase-like RAM_28410 IPR003594 Histidine kinase/HSP90-like ATPase RAM_28410 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_28410 IPR029016 GAF-like domain superfamily RAM_28410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_28410 IPR003018 GAF domain RAM_28420 IPR016032 Signal transduction response regulator, C-terminal effector RAM_28420 IPR000792 Transcription regulator LuxR, C-terminal RAM_28420 IPR001789 Signal transduction response regulator, receiver domain RAM_28420 IPR011006 CheY-like superfamily RAM_28430 IPR018080 Band 7/stomatin-like, conserved site RAM_28430 IPR001972 Stomatin family RAM_28430 IPR001107 Band 7 domain RAM_28430 IPR036013 Band 7/SPFH domain superfamily RAM_28430 IPR032435 Band 7, C-terminal extension RAM_28445 IPR000836 Phosphoribosyltransferase domain RAM_28445 IPR029057 Phosphoribosyltransferase-like RAM_28445 IPR007815 Erythromycin esterase RAM_28500 IPR002549 Transmembrane protein TqsA-like RAM_28520 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RAM_28520 IPR011793 Putative glutamate--cysteine ligase YbdK RAM_28520 IPR006336 Glutamate--cysteine ligase, GCS2 RAM_28575 IPR039420 Transcriptional regulatory protein WalR-like RAM_28575 IPR001789 Signal transduction response regulator, receiver domain RAM_28575 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28575 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_28575 IPR011006 CheY-like superfamily RAM_28580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_28580 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_28580 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_28580 IPR003660 HAMP domain RAM_28580 IPR003594 Histidine kinase/HSP90-like ATPase RAM_28580 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_28580 IPR005467 Histidine kinase domain RAM_28590 IPR001296 Glycosyl transferase, family 1 RAM_28590 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_28590 IPR017814 Mycothiol biosynthesis protein, MshA RAM_28595 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_28595 IPR002938 FAD-binding domain RAM_28630 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_28630 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_28630 IPR036291 NAD(P)-binding domain superfamily RAM_28635 IPR041347 MftR, C-terminal RAM_28635 IPR001647 DNA-binding HTH domain, TetR-type RAM_28635 IPR009057 Homeobox-like domain superfamily RAM_28635 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_28640 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_28640 IPR013325 RNA polymerase sigma factor, region 2 RAM_28640 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_28640 IPR007627 RNA polymerase sigma-70 region 2 RAM_28640 IPR014284 RNA polymerase sigma-70 like domain RAM_28640 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_28640 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28645 IPR007627 RNA polymerase sigma-70 region 2 RAM_28645 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_28645 IPR013325 RNA polymerase sigma factor, region 2 RAM_28645 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_28645 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_28645 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28645 IPR014284 RNA polymerase sigma-70 like domain RAM_28650 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_28650 IPR014284 RNA polymerase sigma-70 like domain RAM_28650 IPR007627 RNA polymerase sigma-70 region 2 RAM_28650 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28650 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_28650 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_28650 IPR013325 RNA polymerase sigma factor, region 2 RAM_28655 IPR011008 Dimeric alpha-beta barrel RAM_28655 IPR005545 YCII-related RAM_28675 IPR013783 Immunoglobulin-like fold RAM_28675 IPR017853 Glycoside hydrolase superfamily RAM_28675 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_28675 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_28675 IPR023230 Glycoside hydrolase, family 2, conserved site RAM_28675 IPR006101 Glycoside hydrolase, family 2 RAM_28675 IPR023232 Glycoside hydrolase, family 2, active site RAM_28675 IPR006103 Glycoside hydrolase family 2, catalytic domain RAM_28675 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_28675 IPR008979 Galactose-binding-like domain superfamily RAM_28680 IPR005119 LysR, substrate-binding RAM_28680 IPR000847 Transcription regulator HTH, LysR RAM_28680 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28680 IPR036390 Winged helix DNA-binding domain superfamily RAM_28680 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain RAM_28685 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_28685 IPR036291 NAD(P)-binding domain superfamily RAM_28685 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_28685 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_28720 IPR011009 Protein kinase-like domain superfamily RAM_28720 IPR000719 Protein kinase domain RAM_28720 IPR008271 Serine/threonine-protein kinase, active site RAM_28725 IPR032710 NTF2-like domain superfamily RAM_28725 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28725 IPR014284 RNA polymerase sigma-70 like domain RAM_28725 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_28725 IPR013325 RNA polymerase sigma factor, region 2 RAM_28725 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_28725 IPR037401 SnoaL-like domain RAM_28725 IPR007627 RNA polymerase sigma-70 region 2 RAM_28730 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative RAM_28730 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp RAM_28730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_28740 IPR001128 Cytochrome P450 RAM_28740 IPR002397 Cytochrome P450, B-class RAM_28740 IPR017972 Cytochrome P450, conserved site RAM_28740 IPR036396 Cytochrome P450 superfamily RAM_28750 IPR002397 Cytochrome P450, B-class RAM_28750 IPR036396 Cytochrome P450 superfamily RAM_28750 IPR001128 Cytochrome P450 RAM_28750 IPR017972 Cytochrome P450, conserved site RAM_28755 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_28755 IPR002938 FAD-binding domain RAM_28785 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_28785 IPR010497 Epoxide hydrolase, N-terminal RAM_28785 IPR000639 Epoxide hydrolase-like RAM_28785 IPR029058 Alpha/Beta hydrolase fold RAM_28785 IPR016292 Epoxide hydrolase RAM_28790 IPR000639 Epoxide hydrolase-like RAM_28790 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_28790 IPR010497 Epoxide hydrolase, N-terminal RAM_28790 IPR016292 Epoxide hydrolase RAM_28790 IPR029058 Alpha/Beta hydrolase fold RAM_28800 IPR023031 Orotate phosphoribosyltransferase RAM_28800 IPR004467 Orotate phosphoribosyl transferase domain RAM_28800 IPR029057 Phosphoribosyltransferase-like RAM_28800 IPR000836 Phosphoribosyltransferase domain RAM_28810 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_28810 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28810 IPR016032 Signal transduction response regulator, C-terminal effector RAM_28810 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_28810 IPR000792 Transcription regulator LuxR, C-terminal RAM_28815 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_28815 IPR041664 Orc1-like, AAA ATPase domain RAM_28815 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase RAM_28815 IPR029787 Nucleotide cyclase RAM_28815 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_28820 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_28820 IPR036291 NAD(P)-binding domain superfamily RAM_28820 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_28820 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_28835 IPR011008 Dimeric alpha-beta barrel RAM_28835 IPR006314 Dyp-type peroxidase RAM_28845 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_28845 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_28845 IPR036291 NAD(P)-binding domain superfamily RAM_28850 IPR004638 Drug resistance transporter EmrB-like RAM_28850 IPR036259 MFS transporter superfamily RAM_28850 IPR020846 Major facilitator superfamily domain RAM_28850 IPR011701 Major facilitator superfamily RAM_28860 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_28860 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28860 IPR016032 Signal transduction response regulator, C-terminal effector RAM_28860 IPR000792 Transcription regulator LuxR, C-terminal RAM_28875 IPR003439 ABC transporter-like RAM_28875 IPR005670 Phosphate transport system permease protein 1 RAM_28875 IPR003593 AAA+ ATPase domain RAM_28875 IPR015850 ABC transporter, phosphate import, PstB RAM_28875 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_28875 IPR017871 ABC transporter, conserved site RAM_28915 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS RAM_28915 IPR024370 PBP domain RAM_28920 IPR035906 MetI-like superfamily RAM_28920 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_28920 IPR005672 Phosphate transport system permease protein PstA RAM_28925 IPR035906 MetI-like superfamily RAM_28925 IPR011864 Phosphate ABC transporter, permease protein PstC RAM_28925 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_28935 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_28935 IPR003660 HAMP domain RAM_28935 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_28935 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_28935 IPR003594 Histidine kinase/HSP90-like ATPase RAM_28935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_28935 IPR005467 Histidine kinase domain RAM_28940 IPR011006 CheY-like superfamily RAM_28940 IPR039420 Transcriptional regulatory protein WalR-like RAM_28940 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28940 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_28940 IPR001789 Signal transduction response regulator, receiver domain RAM_28945 IPR001173 Glycosyltransferase 2-like RAM_28945 IPR029044 Nucleotide-diphospho-sugar transferases RAM_28945 IPR039528 DPM1-like RAM_28950 IPR038731 Glycosyltransferase RgtA/B/C/D-like RAM_28960 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RAM_28960 IPR011701 Major facilitator superfamily RAM_28960 IPR036390 Winged helix DNA-binding domain superfamily RAM_28960 IPR020846 Major facilitator superfamily domain RAM_28960 IPR036259 MFS transporter superfamily RAM_28960 IPR005829 Sugar transporter, conserved site RAM_28960 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_28965 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_28965 IPR002938 FAD-binding domain RAM_28990 IPR009057 Homeobox-like domain superfamily RAM_28990 IPR001647 DNA-binding HTH domain, TetR-type RAM_28990 IPR032551 HTH-type transcriptional repressor, C-terminal RAM_28990 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_29015 IPR029058 Alpha/Beta hydrolase fold RAM_29015 IPR000073 Alpha/beta hydrolase fold-1 RAM_29045 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_29045 IPR007627 RNA polymerase sigma-70 region 2 RAM_29045 IPR014284 RNA polymerase sigma-70 like domain RAM_29045 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_29045 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_29045 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_29045 IPR013325 RNA polymerase sigma factor, region 2 RAM_29065 IPR000868 Isochorismatase-like RAM_29065 IPR036380 Isochorismatase-like superfamily RAM_29075 IPR000073 Alpha/beta hydrolase fold-1 RAM_29075 IPR029058 Alpha/Beta hydrolase fold RAM_29075 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal RAM_29095 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_29095 IPR002938 FAD-binding domain RAM_29100 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_29100 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_29100 IPR015292 Transcription regulator YbiH, C-terminal RAM_29100 IPR009057 Homeobox-like domain superfamily RAM_29100 IPR001647 DNA-binding HTH domain, TetR-type RAM_29115 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_29115 IPR002937 Amine oxidase RAM_29115 IPR014103 Zeta-carotene desaturase RAM_29120 IPR036390 Winged helix DNA-binding domain superfamily RAM_29120 IPR014757 Transcription regulator IclR, C-terminal RAM_29120 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_29120 IPR005471 Transcription regulator IclR, N-terminal RAM_29120 IPR029016 GAF-like domain superfamily RAM_29125 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_29125 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_29125 IPR036291 NAD(P)-binding domain superfamily RAM_29125 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_29135 IPR029058 Alpha/Beta hydrolase fold RAM_29135 IPR000639 Epoxide hydrolase-like RAM_29135 IPR017727 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, BphD RAM_29135 IPR000073 Alpha/beta hydrolase fold-1 RAM_29140 IPR023789 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase RAM_29140 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B RAM_29145 IPR019844 Cold-shock (CSD) domain RAM_29145 IPR002059 Cold-shock protein, DNA-binding RAM_29145 IPR011129 Cold shock domain RAM_29145 IPR012156 Cold shock, CspA RAM_29145 IPR012340 Nucleic acid-binding, OB-fold RAM_29155 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_29155 IPR013572 Transcription regulator MAATS, C-terminal RAM_29155 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_29155 IPR001647 DNA-binding HTH domain, TetR-type RAM_29155 IPR009057 Homeobox-like domain superfamily RAM_29165 IPR036291 NAD(P)-binding domain superfamily RAM_29165 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_29175 IPR011008 Dimeric alpha-beta barrel RAM_29175 IPR005545 YCII-related RAM_29185 IPR017853 Glycoside hydrolase superfamily RAM_29185 IPR006101 Glycoside hydrolase, family 2 RAM_29185 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_29185 IPR008979 Galactose-binding-like domain superfamily RAM_29185 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_29185 IPR011013 Galactose mutarotase-like domain superfamily RAM_29185 IPR004199 Beta galactosidase small chain/ domain 5 RAM_29185 IPR006103 Glycoside hydrolase family 2, catalytic domain RAM_29185 IPR023230 Glycoside hydrolase, family 2, conserved site RAM_29185 IPR023232 Glycoside hydrolase, family 2, active site RAM_29185 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_29185 IPR032312 Beta-galactosidase, domain 4 RAM_29185 IPR013783 Immunoglobulin-like fold RAM_29185 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_29185 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase RAM_29190 IPR006153 Cation/H+ exchanger RAM_29190 IPR036318 FAD-binding, type PCMH-like superfamily RAM_29190 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_29190 IPR038770 Sodium/solute symporter superfamily RAM_29190 IPR005170 Transporter-associated domain RAM_29190 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily RAM_29190 IPR030151 K(+)/H(+) antiporter NhaP RAM_29190 IPR006037 Regulator of K+ conductance, C-terminal RAM_29190 IPR023729 K(+)/H(+) antiporter NhaP2 RAM_29200 IPR000883 Cytochrome c oxidase subunit I RAM_29200 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RAM_29200 IPR036927 Cytochrome c oxidase-like, subunit I superfamily RAM_29200 IPR014241 Cytochrome c oxidase, subunit I bacterial type RAM_29200 IPR023616 Cytochrome c oxidase-like, subunit I domain RAM_29205 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RAM_29205 IPR014349 Rieske iron-sulphur protein RAM_29205 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RAM_29210 IPR005797 Cytochrome b/b6, N-terminal RAM_29210 IPR016174 Di-haem cytochrome, transmembrane RAM_29210 IPR027387 Cytochrome b/b6-like domain superfamily RAM_29215 IPR016174 Di-haem cytochrome, transmembrane RAM_29215 IPR005797 Cytochrome b/b6, N-terminal RAM_29215 IPR027387 Cytochrome b/b6-like domain superfamily RAM_29240 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_29240 IPR002938 FAD-binding domain RAM_29250 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_29250 IPR011006 CheY-like superfamily RAM_29250 IPR001789 Signal transduction response regulator, receiver domain RAM_29250 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_29250 IPR039420 Transcriptional regulatory protein WalR-like RAM_29255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_29255 IPR003660 HAMP domain RAM_29255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_29255 IPR005467 Histidine kinase domain RAM_29255 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_29255 IPR003594 Histidine kinase/HSP90-like ATPase RAM_29255 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_29270 IPR011991 ArsR-like helix-turn-helix domain RAM_29270 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_29270 IPR002577 Helix-turn-helix, HxlR type RAM_29270 IPR036390 Winged helix DNA-binding domain superfamily RAM_29280 IPR011991 ArsR-like helix-turn-helix domain RAM_29280 IPR036390 Winged helix DNA-binding domain superfamily RAM_29280 IPR000835 MarR-type HTH domain RAM_29280 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_29285 IPR014743 Chloride channel, core RAM_29285 IPR001807 Chloride channel, voltage gated RAM_29285 IPR023790 Chloride channel, voltage-gated, ClcB RAM_29320 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RAM_29320 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_29320 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RAM_29320 IPR006656 Molybdopterin oxidoreductase RAM_29320 IPR006657 Molybdopterin dinucleotide-binding domain RAM_29320 IPR006443 Formate dehydrogenase-N, alpha subunit RAM_29320 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RAM_29320 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_29325 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RAM_29325 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_29325 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RAM_29325 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RAM_29325 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_29325 IPR006443 Formate dehydrogenase-N, alpha subunit RAM_29325 IPR006657 Molybdopterin dinucleotide-binding domain RAM_29325 IPR006656 Molybdopterin oxidoreductase RAM_29330 IPR014297 Dimethylsulphoxide reductase, chain B RAM_29330 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_29330 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_29365 IPR000292 Formate/nitrite transporter RAM_29365 IPR024002 Formate/nitrite transporter, conserved site RAM_29365 IPR023271 Aquaporin-like RAM_29375 IPR000802 Arsenical pump membrane protein, ArsB RAM_29375 IPR004680 Citrate transporter-like domain RAM_29395 IPR002293 Amino acid/polyamine transporter I RAM_29400 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp RAM_29400 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative RAM_29400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_29435 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily RAM_29435 IPR036318 FAD-binding, type PCMH-like superfamily RAM_29435 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_29435 IPR002346 Molybdopterin dehydrogenase, FAD-binding RAM_29435 IPR016166 FAD-binding domain, PCMH-type RAM_29435 IPR005107 CO dehydrogenase flavoprotein, C-terminal RAM_29440 IPR036884 [2Fe-2S]-binding domain superfamily RAM_29440 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_29440 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_29440 IPR002888 [2Fe-2S]-binding RAM_29440 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_29440 IPR012675 Beta-grasp domain superfamily RAM_29450 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_29450 IPR023210 NADP-dependent oxidoreductase domain RAM_29450 IPR020471 Aldo/keto reductase RAM_29455 IPR027399 Alcohol dehydrogenase GroES-associated RAM_29455 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_29455 IPR011032 GroES-like superfamily RAM_29455 IPR036291 NAD(P)-binding domain superfamily RAM_29455 IPR013149 Alcohol dehydrogenase, C-terminal RAM_29455 IPR013154 Alcohol dehydrogenase, N-terminal RAM_29460 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_29460 IPR036291 NAD(P)-binding domain superfamily RAM_29460 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_29460 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_29470 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_29470 IPR023210 NADP-dependent oxidoreductase domain RAM_29470 IPR020471 Aldo/keto reductase RAM_29470 IPR018170 Aldo/keto reductase, conserved site RAM_29510 IPR000843 LacI-type HTH domain RAM_29510 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_29510 IPR028082 Periplasmic binding protein-like I RAM_29510 IPR023588 Transcription regulator HTH, PurR RAM_29520 IPR028082 Periplasmic binding protein-like I RAM_29520 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_29520 IPR023588 Transcription regulator HTH, PurR RAM_29520 IPR000843 LacI-type HTH domain RAM_29550 IPR028082 Periplasmic binding protein-like I RAM_29550 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_29550 IPR000843 LacI-type HTH domain RAM_29570 IPR018062 HTH domain AraC-type, conserved site RAM_29570 IPR018060 DNA binding HTH domain, AraC-type RAM_29570 IPR037923 Transcription regulator HTH-like RAM_29570 IPR009057 Homeobox-like domain superfamily RAM_29570 IPR003313 AraC-type arabinose-binding/dimerisation domain RAM_29585 IPR016032 Signal transduction response regulator, C-terminal effector RAM_29585 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_29585 IPR000792 Transcription regulator LuxR, C-terminal RAM_29585 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_29585 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_29750 IPR025161 Putative transposase IS4/IS5 family RAM_29775 IPR021124 CRISPR-associated protein, Cas5 RAM_29775 IPR013422 CRISPR-associated protein Cas5, N-terminal RAM_29775 IPR010147 CRISPR-associated protein, CasD RAM_29780 IPR010148 CRISPR-associated protein, CT1975 RAM_29800 IPR041372 Cas3, C-terminal RAM_29800 IPR038257 CRISPR-associated Cas3-type HD domain superfamily RAM_29800 IPR006474 Helicase Cas3, CRISPR-associated, core RAM_29800 IPR006483 CRISPR-associated Cas3-type HD domain RAM_29800 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_29800 IPR035011 CRISPR-associated endonuclease/helicase Cas3 RAM_29800 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_29855 IPR027805 Transposase, Helix-turn-helix domain RAM_29855 IPR002559 Transposase, IS4-like RAM_29895 IPR027390 Endoglucanase F, domain 3 RAM_29895 IPR008928 Six-hairpin glycosidase superfamily RAM_29895 IPR012341 Six-hairpin glycosidase-like superfamily RAM_29895 IPR023309 Endoglucanase F, domain 2 RAM_29895 IPR018366 Carbohydrate-binding type-2, conserved site RAM_29895 IPR001919 Carbohydrate-binding type-2 domain RAM_29895 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_29895 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_29895 IPR013783 Immunoglobulin-like fold RAM_29895 IPR003961 Fibronectin type III RAM_29895 IPR000556 Glycoside hydrolase, 48F RAM_29895 IPR036116 Fibronectin type III superfamily RAM_29915 IPR002068 Alpha crystallin/Hsp20 domain RAM_29915 IPR031107 Small heat shock protein HSP20 RAM_29915 IPR008978 HSP20-like chaperone RAM_29930 IPR000120 Amidase RAM_29930 IPR036928 Amidase signature (AS) superfamily RAM_29930 IPR023631 Amidase signature domain RAM_29930 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RAM_29930 IPR020556 Amidase, conserved site RAM_29935 IPR015358 Transcription regulator MerR, DNA binding RAM_29935 IPR000551 MerR-type HTH domain RAM_29935 IPR009061 Putative DNA-binding domain superfamily RAM_29935 IPR011789 Cu(I)-responsive transcriptional regulator RAM_29940 IPR001845 HTH ArsR-type DNA-binding domain RAM_29940 IPR011991 ArsR-like helix-turn-helix domain RAM_29940 IPR036390 Winged helix DNA-binding domain superfamily RAM_29940 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_29945 IPR027469 Cation efflux transmembrane domain superfamily RAM_29945 IPR036837 Cation efflux protein, cytoplasmic domain superfamily RAM_29945 IPR002524 Cation efflux protein RAM_29945 IPR027470 Cation efflux protein, cytoplasmic domain RAM_29960 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RAM_29960 IPR001034 DeoR-type HTH domain RAM_29960 IPR014036 DeoR C-terminal sensor domain RAM_29960 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_29960 IPR036390 Winged helix DNA-binding domain superfamily RAM_29960 IPR037171 NagB/RpiA transferase-like RAM_29970 IPR000683 Oxidoreductase, N-terminal RAM_29970 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase RAM_29970 IPR036291 NAD(P)-binding domain superfamily RAM_29970 IPR004104 Oxidoreductase, C-terminal RAM_29995 IPR006059 Bacterial extracellular solute-binding protein RAM_30010 IPR031634 Protein kinase G, rubredoxin domain RAM_30010 IPR011009 Protein kinase-like domain superfamily RAM_30010 IPR031636 Protein kinase G, tetratricopeptide repeat containing domain RAM_30010 IPR008271 Serine/threonine-protein kinase, active site RAM_30010 IPR000719 Protein kinase domain RAM_30010 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_30025 IPR015853 ABC transporter, ferric cation import, FbpC RAM_30025 IPR003593 AAA+ ATPase domain RAM_30025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_30025 IPR030287 Fe(3+) ions import ATP-binding protein FbpC RAM_30025 IPR013611 Transport-associated OB, type 2 RAM_30025 IPR003439 ABC transporter-like RAM_30025 IPR017871 ABC transporter, conserved site RAM_30025 IPR008995 Molybdate/tungstate binding, C-terminal RAM_30035 IPR007325 Kynurenine formamidase/cyclase-like RAM_30035 IPR037175 Kynurenine formamidase superfamily RAM_30040 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_30040 IPR029061 Thiamin diphosphate-binding fold RAM_30040 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_30040 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_30040 IPR000399 TPP-binding enzyme, conserved site RAM_30040 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_30060 IPR011006 CheY-like superfamily RAM_30060 IPR016032 Signal transduction response regulator, C-terminal effector RAM_30060 IPR001789 Signal transduction response regulator, receiver domain RAM_30060 IPR000792 Transcription regulator LuxR, C-terminal RAM_30070 IPR023048 NADH-azoreductase, FMN-dependent RAM_30070 IPR029039 Flavoprotein-like superfamily RAM_30070 IPR003680 Flavodoxin-like fold RAM_30075 IPR036390 Winged helix DNA-binding domain superfamily RAM_30075 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_30075 IPR023071 Transcriptional regulator, SlyA RAM_30075 IPR023187 Transcriptional regulator MarR-type, conserved site RAM_30075 IPR000835 MarR-type HTH domain RAM_30080 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RAM_30080 IPR005791 Protein translocase subunit SecD RAM_30080 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RAM_30090 IPR036291 NAD(P)-binding domain superfamily RAM_30090 IPR016040 NAD(P)-binding domain RAM_30090 IPR021295 Protein of unknown function DUF2867 RAM_30100 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_30100 IPR036390 Winged helix DNA-binding domain superfamily RAM_30100 IPR005119 LysR, substrate-binding RAM_30100 IPR012787 Pca transcription factor PcaQ RAM_30100 IPR000847 Transcription regulator HTH, LysR RAM_30110 IPR005789 Threonine dehydratase, catabolic RAM_30110 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_30110 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RAM_30110 IPR002912 ACT domain RAM_30110 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_30125 IPR038765 Papain-like cysteine peptidase superfamily RAM_30125 IPR000064 Endopeptidase, NLPC/P60 domain RAM_30150 IPR041703 Transcription termination factor Rho, ATP binding domain RAM_30150 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_30150 IPR003593 AAA+ ATPase domain RAM_30150 IPR012340 Nucleic acid-binding, OB-fold RAM_30150 IPR011129 Cold shock domain RAM_30150 IPR011112 Rho termination factor, N-terminal RAM_30150 IPR036269 Rho termination factor, N-terminal domain superfamily RAM_30150 IPR011113 Rho termination factor, RNA-binding domain RAM_30150 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RAM_30150 IPR004665 Transcription termination factor Rho RAM_30165 IPR000772 Ricin B, lectin domain RAM_30165 IPR001000 Glycoside hydrolase family 10 domain RAM_30165 IPR031158 Glycosyl hydrolases family 10, active site RAM_30165 IPR017853 Glycoside hydrolase superfamily RAM_30165 IPR035992 Ricin B-like lectins RAM_30175 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_30175 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_30175 IPR036291 NAD(P)-binding domain superfamily RAM_30180 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_30180 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_30180 IPR036291 NAD(P)-binding domain superfamily RAM_30185 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase RAM_30185 IPR029056 Ribokinase-like RAM_30190 IPR014636 RNase H, phosphoglycerate mutase domain-containing RAM_30190 IPR036397 Ribonuclease H superfamily RAM_30190 IPR002156 Ribonuclease H domain RAM_30190 IPR012337 Ribonuclease H-like superfamily RAM_30190 IPR029033 Histidine phosphatase superfamily RAM_30190 IPR013078 Histidine phosphatase superfamily, clade-1 RAM_30220 IPR011006 CheY-like superfamily RAM_30220 IPR001789 Signal transduction response regulator, receiver domain RAM_30220 IPR035965 PAS domain superfamily RAM_30220 IPR000700 PAS-associated, C-terminal RAM_30220 IPR000014 PAS domain RAM_30220 IPR001610 PAC motif RAM_30220 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_30220 IPR013656 PAS fold-4 RAM_30220 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_30220 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_30220 IPR005467 Histidine kinase domain RAM_30220 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_30220 IPR003594 Histidine kinase/HSP90-like ATPase RAM_30240 IPR012341 Six-hairpin glycosidase-like superfamily RAM_30240 IPR008928 Six-hairpin glycosidase superfamily RAM_30240 IPR011013 Galactose mutarotase-like domain superfamily RAM_30240 IPR000165 Glucoamylase RAM_30240 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_30240 IPR006425 Glucoamylase, bacterial RAM_30240 IPR015220 Glucodextranase, N-terminal RAM_30240 IPR011613 GH15-like domain RAM_30245 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_30245 IPR007061 Protein of unknown function DUF664 RAM_30250 IPR023210 NADP-dependent oxidoreductase domain RAM_30250 IPR020471 Aldo/keto reductase RAM_30250 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_30265 IPR029058 Alpha/Beta hydrolase fold RAM_30265 IPR000073 Alpha/beta hydrolase fold-1 RAM_30265 IPR000639 Epoxide hydrolase-like RAM_30265 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal RAM_30280 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_30280 IPR013026 Tetratricopeptide repeat-containing domain RAM_30280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_30280 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_30280 IPR002182 NB-ARC RAM_30280 IPR005158 Bacterial transcriptional activator domain RAM_30280 IPR019734 Tetratricopeptide repeat RAM_30280 IPR016032 Signal transduction response regulator, C-terminal effector RAM_30280 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_30340 IPR004107 Integrase, SAM-like, N-terminal RAM_30340 IPR010998 Integrase/recombinase, N-terminal RAM_30340 IPR002104 Integrase, catalytic domain RAM_30340 IPR013762 Integrase-like, catalytic domain superfamily RAM_30340 IPR011010 DNA breaking-rejoining enzyme, catalytic core RAM_30340 IPR023009 Tyrosine recombinase XerC/XerD RAM_30345 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_30345 IPR016161 Aldehyde/histidinol dehydrogenase RAM_30345 IPR016160 Aldehyde dehydrogenase, cysteine active site RAM_30345 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_30345 IPR015590 Aldehyde dehydrogenase domain RAM_30395 IPR002569 Peptide methionine sulphoxide reductase MsrA RAM_30395 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily RAM_30400 IPR001570 Peptidase M4, C-terminal RAM_30400 IPR027268 Peptidase M4/M1, CTD superfamily RAM_30400 IPR007484 Peptidase M28 RAM_30400 IPR041756 Peptidase M28, SGAP-like RAM_30400 IPR013856 Peptidase M4 domain RAM_30400 IPR007484 Peptidase M28 RAM_30400 IPR041756 Peptidase M28, SGAP-like RAM_30400 IPR027268 Peptidase M4/M1, CTD superfamily RAM_30400 IPR013856 Peptidase M4 domain RAM_30400 IPR001570 Peptidase M4, C-terminal RAM_30410 IPR025302 Domain of unknown function DUF4162 RAM_30410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_30410 IPR003593 AAA+ ATPase domain RAM_30410 IPR003439 ABC transporter-like RAM_30410 IPR017871 ABC transporter, conserved site RAM_30410 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_30415 IPR013525 ABC-2 type transporter RAM_30415 IPR000412 ABC-2 transporter RAM_30420 IPR004378 F420H(2)-dependent quinone reductase RAM_30420 IPR012349 FMN-binding split barrel RAM_30430 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_30430 IPR036291 NAD(P)-binding domain superfamily RAM_30430 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_30435 IPR005543 PASTA domain RAM_30435 IPR008271 Serine/threonine-protein kinase, active site RAM_30435 IPR017441 Protein kinase, ATP binding site RAM_30435 IPR011009 Protein kinase-like domain superfamily RAM_30435 IPR000719 Protein kinase domain RAM_30450 IPR026591 Sirtuin, catalytic core small domain superfamily RAM_30450 IPR026590 Sirtuin family, catalytic core domain RAM_30450 IPR003000 Sirtuin family RAM_30450 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_30450 IPR028628 Sirtuin, class U RAM_30460 IPR011537 NADH ubiquinone oxidoreductase, F subunit RAM_30460 IPR019554 Soluble ligand binding domain RAM_30460 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily RAM_30460 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain RAM_30460 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily RAM_30460 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain RAM_30460 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site RAM_30480 IPR007312 Phosphoesterase RAM_30480 IPR017850 Alkaline-phosphatase-like, core domain superfamily RAM_30505 IPR010126 Esterase, PHB depolymerase RAM_30505 IPR029058 Alpha/Beta hydrolase fold RAM_30530 IPR036259 MFS transporter superfamily RAM_30530 IPR005828 Major facilitator, sugar transporter-like RAM_30530 IPR005829 Sugar transporter, conserved site RAM_30530 IPR020846 Major facilitator superfamily domain RAM_30535 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_30535 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_30535 IPR036291 NAD(P)-binding domain superfamily RAM_30535 IPR011294 3-hydroxybutyrate dehydrogenase RAM_30560 IPR042099 AMP-dependent synthetase-like superfamily RAM_30560 IPR025110 AMP-binding enzyme, C-terminal domain RAM_30560 IPR000873 AMP-dependent synthetase/ligase RAM_30560 IPR020845 AMP-binding, conserved site RAM_30585 IPR003593 AAA+ ATPase domain RAM_30585 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_30585 IPR011704 ATPase, dynein-related, AAA domain RAM_30595 IPR008912 Uncharacterised protein family CoxE-like RAM_30595 IPR002035 von Willebrand factor, type A RAM_30595 IPR036465 von Willebrand factor A-like domain superfamily RAM_30600 IPR035977 Ribosomal protein L36 superfamily RAM_30600 IPR000473 Ribosomal protein L36 RAM_30610 IPR002577 Helix-turn-helix, HxlR type RAM_30610 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_30610 IPR036390 Winged helix DNA-binding domain superfamily RAM_30615 IPR020946 Flavin monooxygenase-like RAM_30615 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_30620 IPR004103 Polysaccharide lyase family 8, C-terminal RAM_30620 IPR008929 Chondroitin AC/alginate lyase RAM_30620 IPR011013 Galactose mutarotase-like domain superfamily RAM_30620 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_30620 IPR011071 Polysaccharide lyase family 8-like, C-terminal RAM_30620 IPR003159 Polysaccharide lyase family 8, central domain RAM_30620 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical RAM_30620 IPR038970 Polysaccharide lyase 8 RAM_30625 IPR015590 Aldehyde dehydrogenase domain RAM_30625 IPR016161 Aldehyde/histidinol dehydrogenase RAM_30625 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_30625 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_30635 IPR036849 Enolase-like, C-terminal domain superfamily RAM_30635 IPR029065 Enolase C-terminal domain-like RAM_30635 IPR034598 D-Glucarate dehydratase-like RAM_30635 IPR029017 Enolase-like, N-terminal RAM_30635 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_30635 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_30635 IPR034593 Mandelate racemase-like RAM_30640 IPR002220 DapA-like RAM_30640 IPR017655 5-dehydro-4-deoxyglucarate dehydratase RAM_30640 IPR013785 Aldolase-type TIM barrel RAM_30650 IPR005471 Transcription regulator IclR, N-terminal RAM_30650 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_30650 IPR036390 Winged helix DNA-binding domain superfamily RAM_30650 IPR014757 Transcription regulator IclR, C-terminal RAM_30650 IPR029016 GAF-like domain superfamily RAM_30655 IPR016040 NAD(P)-binding domain RAM_30655 IPR036291 NAD(P)-binding domain superfamily RAM_30670 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RAM_30670 IPR002509 NodB homology domain RAM_30670 IPR017219 Peptidoglycan GlcNAc deacetylase RAM_30670 IPR040802 Peptidoglycan GlcNAc deacetylase, N-terminal RAM_30680 IPR000792 Transcription regulator LuxR, C-terminal RAM_30680 IPR016032 Signal transduction response regulator, C-terminal effector RAM_30680 IPR011006 CheY-like superfamily RAM_30680 IPR001789 Signal transduction response regulator, receiver domain RAM_30705 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_30705 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_30705 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_30705 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_30705 IPR017938 Riboflavin synthase-like beta-barrel RAM_30705 IPR012675 Beta-grasp domain superfamily RAM_30705 IPR000951 Phthalate dioxygenase reductase RAM_30705 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_30720 IPR039697 Iron-type alcohol dehydrogenase-like RAM_30720 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA RAM_30730 IPR029000 Cyclophilin-like domain superfamily RAM_30730 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RAM_30745 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase RAM_30745 IPR042097 Aminopeptidase N-like , N-terminal RAM_30745 IPR024571 ERAP1-like C-terminal domain RAM_30745 IPR014782 Peptidase M1, membrane alanine aminopeptidase RAM_30745 IPR034016 Aminopeptidase N-type RAM_30750 IPR001242 Condensation domain RAM_30750 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_30750 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_30750 IPR010060 Non-ribosomal peptide synthase RAM_30750 IPR010071 Amino acid adenylation domain RAM_30750 IPR036736 ACP-like superfamily RAM_30750 IPR025110 AMP-binding enzyme, C-terminal domain RAM_30750 IPR020845 AMP-binding, conserved site RAM_30750 IPR000873 AMP-dependent synthetase/ligase RAM_30750 IPR042099 AMP-dependent synthetase-like superfamily RAM_30750 IPR006162 Phosphopantetheine attachment site RAM_30750 IPR009081 Phosphopantetheine binding ACP domain RAM_30755 IPR016484 GTP-binding protein EngA RAM_30755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_30755 IPR015946 K homology domain-like, alpha/beta RAM_30755 IPR032859 GTPase Der, C-terminal KH-domain-like RAM_30755 IPR006073 GTP binding domain RAM_30755 IPR031166 EngA-type guanine nucleotide-binding (G) domain RAM_30755 IPR003593 AAA+ ATPase domain RAM_30755 IPR005225 Small GTP-binding protein domain RAM_30765 IPR011994 Cytidylate kinase domain RAM_30765 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_30765 IPR003136 Cytidylate kinase RAM_30785 IPR006153 Cation/H+ exchanger RAM_30785 IPR038770 Sodium/solute symporter superfamily RAM_30790 IPR029058 Alpha/Beta hydrolase fold RAM_30790 IPR008979 Galactose-binding-like domain superfamily RAM_30790 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain RAM_30790 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal RAM_30795 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_30795 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative RAM_30795 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp RAM_30800 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RAM_30800 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RAM_30800 IPR006145 Pseudouridine synthase, RsuA/RluA RAM_30800 IPR002942 RNA-binding S4 domain RAM_30800 IPR036986 RNA-binding S4 domain superfamily RAM_30800 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain RAM_30800 IPR020103 Pseudouridine synthase, catalytic domain superfamily RAM_30805 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_30805 IPR005234 Chromosome segregation/condensation protein ScpB RAM_30805 IPR036390 Winged helix DNA-binding domain superfamily RAM_30810 IPR003768 Segregation and condensation protein A RAM_30820 IPR025669 AAA domain RAM_30820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_30825 IPR023009 Tyrosine recombinase XerC/XerD RAM_30825 IPR011932 Tyrosine recombinase XerD RAM_30825 IPR004107 Integrase, SAM-like, N-terminal RAM_30825 IPR010998 Integrase/recombinase, N-terminal RAM_30825 IPR002104 Integrase, catalytic domain RAM_30825 IPR011010 DNA breaking-rejoining enzyme, catalytic core RAM_30825 IPR013762 Integrase-like, catalytic domain superfamily RAM_30835 IPR000086 NUDIX hydrolase domain RAM_30835 IPR020084 NUDIX hydrolase, conserved site RAM_30835 IPR015797 NUDIX hydrolase-like domain superfamily RAM_30835 IPR004385 Nucleoside diphosphate pyrophosphatase RAM_30840 IPR017926 Glutamine amidotransferase RAM_30840 IPR017456 CTP synthase, N-terminal RAM_30840 IPR004468 CTP synthase RAM_30840 IPR029062 Class I glutamine amidotransferase-like RAM_30840 IPR033828 CTP synthase GATase domain RAM_30840 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_30850 IPR000485 AsnC-type HTH domain RAM_30850 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_30850 IPR000524 Transcription regulator HTH, GntR RAM_30850 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_30850 IPR036390 Winged helix DNA-binding domain superfamily RAM_30850 IPR011711 GntR, C-terminal RAM_30855 IPR001248 Purine-cytosine permease RAM_30855 IPR038271 Purine-cytosine permease superfamily RAM_30855 IPR012681 Nucleobase cation symporter-1, NCS1 RAM_30860 IPR015942 Asp/Glu/hydantoin racemase RAM_30875 IPR021522 Copper transporter MctB RAM_30890 IPR036291 NAD(P)-binding domain superfamily RAM_30890 IPR004627 L-threonine 3-dehydrogenase RAM_30890 IPR011032 GroES-like superfamily RAM_30890 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_30890 IPR013154 Alcohol dehydrogenase, N-terminal RAM_30890 IPR020843 Polyketide synthase, enoylreductase domain RAM_30890 IPR013149 Alcohol dehydrogenase, C-terminal RAM_30900 IPR004604 DNA recombination/repair protein RecN RAM_30900 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_30900 IPR003395 RecF/RecN/SMC, N-terminal RAM_30905 IPR002504 NAD kinase RAM_30905 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RAM_30905 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RAM_30905 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal RAM_30910 IPR002877 Ribosomal RNA methyltransferase FtsJ domain RAM_30910 IPR004538 Haemolysin A /rRNA methyltransferase TlyA RAM_30910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_30910 IPR036986 RNA-binding S4 domain superfamily RAM_30910 IPR002942 RNA-binding S4 domain RAM_30920 IPR036412 HAD-like superfamily RAM_30920 IPR006357 HAD-superfamily hydrolase, subfamily IIA RAM_30920 IPR023214 HAD superfamily RAM_30920 IPR041065 GCN5-related N-acetyltransferase-like domain RAM_30930 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RAM_30930 IPR002305 Aminoacyl-tRNA synthetase, class Ic RAM_30930 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_30930 IPR002942 RNA-binding S4 domain RAM_30930 IPR002307 Tyrosine-tRNA ligase RAM_30930 IPR024088 Tyrosine-tRNA ligase, bacterial-type RAM_30930 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 RAM_30930 IPR036986 RNA-binding S4 domain superfamily RAM_30935 IPR011034 Formyl transferase-like, C-terminal domain superfamily RAM_30935 IPR003180 Methylpurine-DNA glycosylase RAM_30935 IPR036995 Methylpurine-DNA glycosylase superfamily RAM_30945 IPR025311 Domain of unknown function DUF4166 RAM_30955 IPR029419 Argininosuccinate lyase, C-terminal RAM_30955 IPR008948 L-Aspartase-like RAM_30955 IPR022761 Fumarate lyase, N-terminal RAM_30955 IPR020557 Fumarate lyase, conserved site RAM_30955 IPR024083 Fumarase/histidase, N-terminal RAM_30955 IPR000362 Fumarate lyase family RAM_30955 IPR009049 Argininosuccinate lyase RAM_30960 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body RAM_30960 IPR023434 Argininosuccinate synthase, type 1 subfamily RAM_30960 IPR018223 Argininosuccinate synthase, conserved site RAM_30960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_30960 IPR001518 Argininosuccinate synthase RAM_30965 IPR020900 Arginine repressor, DNA-binding domain RAM_30965 IPR001669 Arginine repressor RAM_30965 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_30965 IPR036390 Winged helix DNA-binding domain superfamily RAM_30965 IPR020899 Arginine repressor, C-terminal RAM_30965 IPR036251 Arginine repressor, C-terminal domain superfamily RAM_30970 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily RAM_30970 IPR024904 Ornithine carbamoyltransferase RAM_30970 IPR006130 Aspartate/ornithine carbamoyltransferase RAM_30970 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RAM_30970 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RAM_30970 IPR002292 Ornithine/putrescine carbamoyltransferase RAM_30975 IPR004636 Acetylornithine/Succinylornithine transaminase family RAM_30975 IPR005814 Aminotransferase class-III RAM_30975 IPR015424 Pyridoxal phosphate-dependent transferase RAM_30975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_30975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_30980 IPR036393 Acetylglutamate kinase-like superfamily RAM_30980 IPR004662 Acetylglutamate kinase family RAM_30980 IPR037528 Acetylglutamate kinase ArgB RAM_30980 IPR001048 Aspartate/glutamate/uridylate kinase RAM_30980 IPR001057 Glutamate/acetylglutamate kinase RAM_30980 IPR041727 N-Acetyl-L-glutamate kinase, cyclic RAM_30985 IPR016117 ArgJ-like domain superfamily RAM_30985 IPR042195 ArgJ beta chain, C-terminal domain RAM_30985 IPR002813 Arginine biosynthesis protein ArgJ RAM_30990 IPR000534 Semialdehyde dehydrogenase, NAD-binding RAM_30990 IPR036291 NAD(P)-binding domain superfamily RAM_30990 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site RAM_30990 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 RAM_30990 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RAM_31010 IPR029058 Alpha/Beta hydrolase fold RAM_31010 IPR000073 Alpha/beta hydrolase fold-1 RAM_31020 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain RAM_31020 IPR009061 Putative DNA-binding domain superfamily RAM_31020 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit RAM_31020 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RAM_31020 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain RAM_31020 IPR002547 tRNA-binding domain RAM_31020 IPR005147 tRNA synthetase, B5-domain RAM_31020 IPR005121 Ferrodoxin-fold anticodon-binding domain RAM_31020 IPR012340 Nucleic acid-binding, OB-fold RAM_31020 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily RAM_31020 IPR005146 B3/B4 tRNA-binding domain RAM_31025 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RAM_31025 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RAM_31025 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RAM_31025 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RAM_31025 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_31025 IPR002319 Phenylalanyl-tRNA synthetase RAM_31035 IPR029028 Alpha/beta knot methyltransferases RAM_31035 IPR029064 50S ribosomal protein L30e-like RAM_31035 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RAM_31035 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RAM_31035 IPR001537 tRNA/rRNA methyltransferase, SpoU type RAM_31040 IPR005813 Ribosomal protein L20 RAM_31040 IPR035566 Ribosomal protein L20, C-terminal RAM_31045 IPR001706 Ribosomal protein L35, non-mitochondrial RAM_31045 IPR037229 Ribosomal protein L35 superfamily RAM_31045 IPR021137 Ribosomal protein L35 RAM_31050 IPR019814 Translation initiation factor 3, N-terminal RAM_31050 IPR019815 Translation initiation factor 3, C-terminal RAM_31050 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily RAM_31050 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily RAM_31050 IPR019813 Translation initiation factor 3, conserved site RAM_31050 IPR001288 Translation initiation factor 3 RAM_31060 IPR036390 Winged helix DNA-binding domain superfamily RAM_31060 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_31060 IPR000524 Transcription regulator HTH, GntR RAM_31060 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_31060 IPR011711 GntR, C-terminal RAM_31065 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_31065 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase RAM_31065 IPR005965 1-aminocyclopropane-1-carboxylate deaminase RAM_31065 IPR020601 1-aminocyclopropane-1-carboxylate deaminase, bacterial RAM_31065 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_31075 IPR036390 Winged helix DNA-binding domain superfamily RAM_31075 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_31075 IPR014757 Transcription regulator IclR, C-terminal RAM_31075 IPR011991 ArsR-like helix-turn-helix domain RAM_31075 IPR029016 GAF-like domain superfamily RAM_31075 IPR005471 Transcription regulator IclR, N-terminal RAM_31080 IPR029056 Ribokinase-like RAM_31080 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_31080 IPR002139 Ribokinase/fructokinase RAM_31080 IPR011611 Carbohydrate kinase PfkB RAM_31090 IPR013108 Amidohydrolase 3 RAM_31090 IPR023100 D-aminoacylase, insert domain superfamily RAM_31090 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_31090 IPR032466 Metal-dependent hydrolase RAM_31095 IPR003474 Gluconate transporter RAM_31110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_31110 IPR035906 MetI-like superfamily RAM_31115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_31115 IPR035906 MetI-like superfamily RAM_31120 IPR025705 Beta-hexosaminidase RAM_31120 IPR015883 Glycoside hydrolase family 20, catalytic domain RAM_31120 IPR029018 Beta-hexosaminidase-like, domain 2 RAM_31120 IPR017853 Glycoside hydrolase superfamily RAM_31120 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal RAM_31130 IPR024187 Signal transduction response regulator, citrate/malate metabolism RAM_31130 IPR001789 Signal transduction response regulator, receiver domain RAM_31130 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_31130 IPR036390 Winged helix DNA-binding domain superfamily RAM_31130 IPR011006 CheY-like superfamily RAM_31135 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_31135 IPR000014 PAS domain RAM_31135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_31135 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB RAM_31135 IPR003594 Histidine kinase/HSP90-like ATPase RAM_31135 IPR013767 PAS fold RAM_31135 IPR033463 Single cache domain 3 RAM_31135 IPR005467 Histidine kinase domain RAM_31135 IPR029151 Periplasmic sensor-like domain superfamily RAM_31135 IPR035965 PAS domain superfamily RAM_31135 IPR039506 SpoOB, alpha-helical domain RAM_31140 IPR018107 Sodium:dicarboxylate symporter, conserved site RAM_31140 IPR036458 Sodium:dicarboxylate symporter superfamily RAM_31140 IPR023954 C4-dicarboxylate transport protein RAM_31140 IPR001991 Sodium:dicarboxylate symporter RAM_31150 IPR011701 Major facilitator superfamily RAM_31150 IPR020846 Major facilitator superfamily domain RAM_31150 IPR036259 MFS transporter superfamily RAM_31150 IPR005829 Sugar transporter, conserved site RAM_31165 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_31165 IPR013325 RNA polymerase sigma factor, region 2 RAM_31165 IPR007630 RNA polymerase sigma-70 region 4 RAM_31165 IPR014284 RNA polymerase sigma-70 like domain RAM_31165 IPR007627 RNA polymerase sigma-70 region 2 RAM_31165 IPR039425 RNA polymerase sigma-70 like RAM_31165 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_31165 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_31180 IPR041552 UvrA DNA-binding domain RAM_31180 IPR041102 UvrA, interaction domain RAM_31180 IPR004602 UvrABC system subunit A RAM_31180 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_31180 IPR017871 ABC transporter, conserved site RAM_31180 IPR003439 ABC transporter-like RAM_31190 IPR001279 Metallo-beta-lactamase RAM_31190 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_31220 IPR014710 RmlC-like jelly roll fold RAM_31220 IPR027378 Cyclic nucleotide-regulated ion channel, N-terminal RAM_31220 IPR018490 Cyclic nucleotide-binding-like RAM_31220 IPR018488 Cyclic nucleotide-binding, conserved site RAM_31220 IPR000595 Cyclic nucleotide-binding domain RAM_31220 IPR013099 Potassium channel domain RAM_31225 IPR012337 Ribonuclease H-like superfamily RAM_31225 IPR036397 Ribonuclease H superfamily RAM_31225 IPR002156 Ribonuclease H domain RAM_31225 IPR022892 Ribonuclease HI RAM_31230 IPR023006 Uncharacterised protein family UPF0225 RAM_31230 IPR032710 NTF2-like domain superfamily RAM_31240 IPR013783 Immunoglobulin-like fold RAM_31240 IPR041351 Exo-beta-D-glucosaminidase, Ig-fold domain RAM_31240 IPR028829 Exo-beta-D-glucosaminidase RAM_31240 IPR008979 Galactose-binding-like domain superfamily RAM_31240 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_31240 IPR005084 Carbohydrate binding module family 6 RAM_31240 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_31240 IPR017853 Glycoside hydrolase superfamily RAM_31240 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_31245 IPR029058 Alpha/Beta hydrolase fold RAM_31245 IPR019826 Carboxylesterase type B, active site RAM_31245 IPR002018 Carboxylesterase, type B RAM_31255 IPR006153 Cation/H+ exchanger RAM_31255 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria RAM_31255 IPR018422 Cation/H+ exchanger, CPA1 family RAM_31260 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RAM_31260 IPR023086 Phosphoglycerate mutase, GpmB, probable RAM_31260 IPR013078 Histidine phosphatase superfamily, clade-1 RAM_31260 IPR029033 Histidine phosphatase superfamily RAM_31270 IPR038468 Transport accessory protein MmpS, soluble domain superfamily RAM_31270 IPR008693 Transport accessory protein MmpS RAM_31280 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_31280 IPR000843 LacI-type HTH domain RAM_31280 IPR028082 Periplasmic binding protein-like I RAM_31305 IPR011042 Six-bladed beta-propeller, TolB-like RAM_31305 IPR029058 Alpha/Beta hydrolase fold RAM_31305 IPR011659 WD40-like Beta Propeller RAM_31305 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RAM_31310 IPR005496 Integral membrane protein TerC RAM_31310 IPR022369 Integral membrane protein TerC, riboswitch-linked RAM_31315 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_31315 IPR017871 ABC transporter, conserved site RAM_31315 IPR003439 ABC transporter-like RAM_31315 IPR003593 AAA+ ATPase domain RAM_31335 IPR029045 ClpP/crotonase-like domain superfamily RAM_31335 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_31335 IPR001753 Enoyl-CoA hydratase/isomerase RAM_31335 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_31345 IPR029058 Alpha/Beta hydrolase fold RAM_31345 IPR008761 Peptidase S37, tripeptidyl aminopeptidase RAM_31355 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_31355 IPR024759 UvrB, YAD/RRR-motif-containing domain RAM_31355 IPR004807 UvrABC system, subunit B RAM_31355 IPR001943 UVR domain RAM_31355 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_31355 IPR036876 UVR domain superfamily RAM_31355 IPR006935 Helicase/UvrB, N-terminal RAM_31355 IPR001650 Helicase, C-terminal RAM_31355 IPR041471 UvrB, interaction domain RAM_31380 IPR007344 GrpB/Dephospho-CoA kinase RAM_31380 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_31380 IPR001977 Dephospho-CoA kinase RAM_31405 IPR022967 RNA-binding domain, S1 RAM_31405 IPR003029 S1 domain RAM_31405 IPR012340 Nucleic acid-binding, OB-fold RAM_31410 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_31410 IPR013216 Methyltransferase type 11 RAM_31430 IPR017500 Phage infection protein, YhgE, N-terminal RAM_31430 IPR017501 Phage infection protein, YhgE, C-terminal RAM_31430 IPR023908 xxxLxxG heptad repeat RAM_31435 IPR001647 DNA-binding HTH domain, TetR-type RAM_31435 IPR009057 Homeobox-like domain superfamily RAM_31435 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_31435 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_31435 IPR013572 Transcription regulator MAATS, C-terminal RAM_31440 IPR014710 RmlC-like jelly roll fold RAM_31440 IPR003313 AraC-type arabinose-binding/dimerisation domain RAM_31440 IPR009057 Homeobox-like domain superfamily RAM_31440 IPR018060 DNA binding HTH domain, AraC-type RAM_31440 IPR018062 HTH domain AraC-type, conserved site RAM_31440 IPR011051 RmlC-like cupin domain superfamily RAM_31445 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_31445 IPR020843 Polyketide synthase, enoylreductase domain RAM_31445 IPR036291 NAD(P)-binding domain superfamily RAM_31445 IPR011032 GroES-like superfamily RAM_31445 IPR013154 Alcohol dehydrogenase, N-terminal RAM_31445 IPR013149 Alcohol dehydrogenase, C-terminal RAM_31445 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 RAM_31460 IPR001098 DNA-directed DNA polymerase, family A, palm domain RAM_31460 IPR019760 DNA-directed DNA polymerase, family A, conserved site RAM_31460 IPR036279 5'-3' exonuclease, C-terminal domain superfamily RAM_31460 IPR002421 5'-3' exonuclease, N-terminal RAM_31460 IPR018320 DNA polymerase 1 RAM_31460 IPR020045 DNA polymerase I-like, H3TH domain RAM_31460 IPR036397 Ribonuclease H superfamily RAM_31460 IPR002562 3'-5' exonuclease domain RAM_31460 IPR012337 Ribonuclease H-like superfamily RAM_31460 IPR002298 DNA polymerase A RAM_31460 IPR008918 Helix-hairpin-helix motif, class 2 RAM_31460 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RAM_31460 IPR029060 PIN-like domain superfamily RAM_31465 IPR006683 Thioesterase domain RAM_31465 IPR029069 HotDog domain superfamily RAM_31465 IPR003736 Phenylacetic acid degradation-related domain RAM_31465 IPR026576 Proofreading thioesterase EntH RAM_31470 IPR005119 LysR, substrate-binding RAM_31470 IPR036390 Winged helix DNA-binding domain superfamily RAM_31470 IPR000847 Transcription regulator HTH, LysR RAM_31470 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_31485 IPR001851 ABC transporter, permease RAM_31490 IPR001851 ABC transporter, permease RAM_31490 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal RAM_31495 IPR003439 ABC transporter-like RAM_31495 IPR017871 ABC transporter, conserved site RAM_31495 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RAM_31495 IPR003593 AAA+ ATPase domain RAM_31495 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_31500 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RAM_31500 IPR003593 AAA+ ATPase domain RAM_31500 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_31500 IPR017871 ABC transporter, conserved site RAM_31500 IPR003439 ABC transporter-like RAM_31510 IPR005561 ANTAR domain RAM_31510 IPR011006 CheY-like superfamily RAM_31510 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_31510 IPR001789 Signal transduction response regulator, receiver domain RAM_31510 IPR008327 Signal transduction response regulator, antiterminator RAM_31525 IPR022081 Domain of unknown function DUF3631 RAM_31570 IPR011344 Single-stranded DNA-binding protein RAM_31570 IPR000424 Primosome PriB/single-strand DNA-binding RAM_31570 IPR012340 Nucleic acid-binding, OB-fold RAM_31620 IPR038658 Sporulation-specific cell division protein SsgB superfamily RAM_31620 IPR006776 Sporulation-specific cell division protein SsgB RAM_31625 IPR020084 NUDIX hydrolase, conserved site RAM_31625 IPR023214 HAD superfamily RAM_31625 IPR015797 NUDIX hydrolase-like domain superfamily RAM_31625 IPR036412 HAD-like superfamily RAM_31625 IPR006357 HAD-superfamily hydrolase, subfamily IIA RAM_31625 IPR020476 NUDIX hydrolase RAM_31625 IPR000086 NUDIX hydrolase domain RAM_31685 IPR011146 HIT-like domain RAM_31685 IPR039384 HINT family RAM_31685 IPR019808 Histidine triad, conserved site RAM_31685 IPR001310 Histidine triad (HIT) protein RAM_31685 IPR036265 HIT-like superfamily RAM_31710 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_31710 IPR037401 SnoaL-like domain RAM_31710 IPR032710 NTF2-like domain superfamily RAM_31710 IPR013325 RNA polymerase sigma factor, region 2 RAM_31710 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_31710 IPR014284 RNA polymerase sigma-70 like domain RAM_31710 IPR039425 RNA polymerase sigma-70 like RAM_31710 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_31710 IPR014305 RNA polymerase sigma-G type, actinobacteria RAM_31710 IPR007627 RNA polymerase sigma-70 region 2 RAM_31710 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_31760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_31760 IPR003594 Histidine kinase/HSP90-like ATPase RAM_31760 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_31765 IPR000792 Transcription regulator LuxR, C-terminal RAM_31765 IPR001789 Signal transduction response regulator, receiver domain RAM_31765 IPR011006 CheY-like superfamily RAM_31765 IPR016032 Signal transduction response regulator, C-terminal effector RAM_31785 IPR011006 CheY-like superfamily RAM_31785 IPR016032 Signal transduction response regulator, C-terminal effector RAM_31785 IPR001789 Signal transduction response regulator, receiver domain RAM_31785 IPR000792 Transcription regulator LuxR, C-terminal RAM_31790 IPR003594 Histidine kinase/HSP90-like ATPase RAM_31790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_31790 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_31815 IPR036291 NAD(P)-binding domain superfamily RAM_31815 IPR001509 NAD-dependent epimerase/dehydratase RAM_31820 IPR003439 ABC transporter-like RAM_31820 IPR003593 AAA+ ATPase domain RAM_31820 IPR005670 Phosphate transport system permease protein 1 RAM_31820 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_31820 IPR015850 ABC transporter, phosphate import, PstB RAM_31820 IPR017871 ABC transporter, conserved site RAM_31835 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_31835 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_31835 IPR014284 RNA polymerase sigma-70 like domain RAM_31835 IPR039425 RNA polymerase sigma-70 like RAM_31835 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_31835 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_31835 IPR014286 RNA polymerase sigma-70 RpoE type RAM_31835 IPR007627 RNA polymerase sigma-70 region 2 RAM_31835 IPR013325 RNA polymerase sigma factor, region 2 RAM_31840 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RAM_31840 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA RAM_31840 IPR039697 Iron-type alcohol dehydrogenase-like RAM_31845 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_31845 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RAM_31845 IPR036291 NAD(P)-binding domain superfamily RAM_31845 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RAM_31845 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RAM_31845 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RAM_31845 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_31850 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_31850 IPR016161 Aldehyde/histidinol dehydrogenase RAM_31850 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_31850 IPR015590 Aldehyde dehydrogenase domain RAM_31850 IPR016160 Aldehyde dehydrogenase, cysteine active site RAM_31850 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_31855 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_31855 IPR029065 Enolase C-terminal domain-like RAM_31855 IPR029017 Enolase-like, N-terminal RAM_31855 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site RAM_31855 IPR034593 Mandelate racemase-like RAM_31855 IPR036849 Enolase-like, C-terminal domain superfamily RAM_31855 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_31855 IPR034589 D-mannonate dehydratase-like RAM_31870 IPR000639 Epoxide hydrolase-like RAM_31870 IPR010497 Epoxide hydrolase, N-terminal RAM_31870 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_31870 IPR016292 Epoxide hydrolase RAM_31870 IPR029058 Alpha/Beta hydrolase fold RAM_31890 IPR020449 Transcription regulator HTH, AraC- type RAM_31890 IPR029062 Class I glutamine amidotransferase-like RAM_31890 IPR002818 DJ-1/PfpI RAM_31890 IPR018060 DNA binding HTH domain, AraC-type RAM_31890 IPR018062 HTH domain AraC-type, conserved site RAM_31890 IPR009057 Homeobox-like domain superfamily RAM_31895 IPR016292 Epoxide hydrolase RAM_31895 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_31895 IPR029058 Alpha/Beta hydrolase fold RAM_31895 IPR010497 Epoxide hydrolase, N-terminal RAM_31895 IPR000639 Epoxide hydrolase-like RAM_31905 IPR036291 NAD(P)-binding domain superfamily RAM_31905 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_31905 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_31925 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_31925 IPR007630 RNA polymerase sigma-70 region 4 RAM_31925 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_31925 IPR013325 RNA polymerase sigma factor, region 2 RAM_31925 IPR007627 RNA polymerase sigma-70 region 2 RAM_31925 IPR014284 RNA polymerase sigma-70 like domain RAM_31925 IPR014322 RNA polymerase sigma-B/F/G type RAM_31925 IPR007624 RNA polymerase sigma-70 region 3 RAM_31925 IPR000943 RNA polymerase sigma-70 RAM_31945 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RAM_31945 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_31945 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_31950 IPR010071 Amino acid adenylation domain RAM_31950 IPR036736 ACP-like superfamily RAM_31950 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_31950 IPR020845 AMP-binding, conserved site RAM_31950 IPR010060 Non-ribosomal peptide synthase RAM_31950 IPR001242 Condensation domain RAM_31950 IPR009081 Phosphopantetheine binding ACP domain RAM_31950 IPR006162 Phosphopantetheine attachment site RAM_31950 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_31950 IPR025110 AMP-binding enzyme, C-terminal domain RAM_31950 IPR042099 AMP-dependent synthetase-like superfamily RAM_31950 IPR000873 AMP-dependent synthetase/ligase RAM_31955 IPR001031 Thioesterase RAM_31955 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS RAM_31955 IPR029058 Alpha/Beta hydrolase fold RAM_31960 IPR001242 Condensation domain RAM_31960 IPR006162 Phosphopantetheine attachment site RAM_31960 IPR009081 Phosphopantetheine binding ACP domain RAM_31960 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_31960 IPR000873 AMP-dependent synthetase/ligase RAM_31960 IPR042099 AMP-dependent synthetase-like superfamily RAM_31960 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_31960 IPR001242 Condensation domain RAM_31960 IPR010060 Non-ribosomal peptide synthase RAM_31960 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_31960 IPR009081 Phosphopantetheine binding ACP domain RAM_31960 IPR006162 Phosphopantetheine attachment site RAM_31960 IPR010071 Amino acid adenylation domain RAM_31960 IPR036736 ACP-like superfamily RAM_31960 IPR010071 Amino acid adenylation domain RAM_31960 IPR036736 ACP-like superfamily RAM_31960 IPR025110 AMP-binding enzyme, C-terminal domain RAM_31960 IPR000873 AMP-dependent synthetase/ligase RAM_31960 IPR042099 AMP-dependent synthetase-like superfamily RAM_31960 IPR020845 AMP-binding, conserved site RAM_31960 IPR025110 AMP-binding enzyme, C-terminal domain RAM_31960 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_31960 IPR010060 Non-ribosomal peptide synthase RAM_31960 IPR020845 AMP-binding, conserved site RAM_31965 IPR020802 Polyketide synthase, thioesterase domain RAM_31965 IPR000873 AMP-dependent synthetase/ligase RAM_31965 IPR029058 Alpha/Beta hydrolase fold RAM_31965 IPR010071 Amino acid adenylation domain RAM_31965 IPR008279 PEP-utilising enzyme, mobile domain RAM_31965 IPR010060 Non-ribosomal peptide synthase RAM_31965 IPR001242 Condensation domain RAM_31965 IPR020845 AMP-binding, conserved site RAM_31965 IPR036637 Phosphohistidine domain superfamily RAM_31965 IPR036736 ACP-like superfamily RAM_31965 IPR013216 Methyltransferase type 11 RAM_31965 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_31965 IPR009081 Phosphopantetheine binding ACP domain RAM_31965 IPR006162 Phosphopantetheine attachment site RAM_31965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_31965 IPR001031 Thioesterase RAM_31965 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_31965 IPR000253 Forkhead-associated (FHA) domain RAM_31965 IPR042099 AMP-dependent synthetase-like superfamily RAM_31965 IPR025110 AMP-binding enzyme, C-terminal domain RAM_31970 IPR001242 Condensation domain RAM_31970 IPR042099 AMP-dependent synthetase-like superfamily RAM_31970 IPR000873 AMP-dependent synthetase/ligase RAM_31970 IPR020845 AMP-binding, conserved site RAM_31970 IPR025110 AMP-binding enzyme, C-terminal domain RAM_31970 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_31970 IPR010060 Non-ribosomal peptide synthase RAM_31970 IPR010071 Amino acid adenylation domain RAM_31970 IPR009081 Phosphopantetheine binding ACP domain RAM_31970 IPR006162 Phosphopantetheine attachment site RAM_31970 IPR036736 ACP-like superfamily RAM_31970 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_31980 IPR013120 Male sterility, NAD-binding RAM_31980 IPR036291 NAD(P)-binding domain superfamily RAM_31980 IPR010060 Non-ribosomal peptide synthase RAM_31980 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_31980 IPR001242 Condensation domain RAM_31980 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_31980 IPR042099 AMP-dependent synthetase-like superfamily RAM_31980 IPR000873 AMP-dependent synthetase/ligase RAM_31980 IPR010071 Amino acid adenylation domain RAM_31980 IPR020845 AMP-binding, conserved site RAM_31980 IPR009081 Phosphopantetheine binding ACP domain RAM_31980 IPR036736 ACP-like superfamily RAM_31980 IPR006162 Phosphopantetheine attachment site RAM_31980 IPR010080 Thioester reductase-like domain RAM_31980 IPR025110 AMP-binding enzyme, C-terminal domain RAM_31990 IPR005153 MbtH-like domain RAM_31990 IPR038020 MbtH-like domain superfamily RAM_31990 IPR037407 MbtH-like protein RAM_31995 IPR006162 Phosphopantetheine attachment site RAM_31995 IPR001031 Thioesterase RAM_31995 IPR001242 Condensation domain RAM_31995 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_31995 IPR042099 AMP-dependent synthetase-like superfamily RAM_31995 IPR000873 AMP-dependent synthetase/ligase RAM_31995 IPR009081 Phosphopantetheine binding ACP domain RAM_31995 IPR036736 ACP-like superfamily RAM_31995 IPR025110 AMP-binding enzyme, C-terminal domain RAM_31995 IPR029058 Alpha/Beta hydrolase fold RAM_31995 IPR010071 Amino acid adenylation domain RAM_31995 IPR020845 AMP-binding, conserved site RAM_31995 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_32000 IPR001128 Cytochrome P450 RAM_32000 IPR002397 Cytochrome P450, B-class RAM_32000 IPR017972 Cytochrome P450, conserved site RAM_32000 IPR036396 Cytochrome P450 superfamily RAM_32010 IPR033195 Glycine/inosamine-phosphate amidinotransferase RAM_32015 IPR020845 AMP-binding, conserved site RAM_32015 IPR001242 Condensation domain RAM_32015 IPR010080 Thioester reductase-like domain RAM_32015 IPR006162 Phosphopantetheine attachment site RAM_32015 IPR009081 Phosphopantetheine binding ACP domain RAM_32015 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_32015 IPR010060 Non-ribosomal peptide synthase RAM_32015 IPR036291 NAD(P)-binding domain superfamily RAM_32015 IPR013120 Male sterility, NAD-binding RAM_32015 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_32015 IPR042099 AMP-dependent synthetase-like superfamily RAM_32015 IPR000873 AMP-dependent synthetase/ligase RAM_32015 IPR025110 AMP-binding enzyme, C-terminal domain RAM_32015 IPR036736 ACP-like superfamily RAM_32015 IPR010071 Amino acid adenylation domain RAM_32020 IPR010071 Amino acid adenylation domain RAM_32020 IPR010080 Thioester reductase-like domain RAM_32020 IPR036736 ACP-like superfamily RAM_32020 IPR025110 AMP-binding enzyme, C-terminal domain RAM_32020 IPR020845 AMP-binding, conserved site RAM_32020 IPR010060 Non-ribosomal peptide synthase RAM_32020 IPR009081 Phosphopantetheine binding ACP domain RAM_32020 IPR006162 Phosphopantetheine attachment site RAM_32020 IPR013120 Male sterility, NAD-binding RAM_32020 IPR042099 AMP-dependent synthetase-like superfamily RAM_32020 IPR000873 AMP-dependent synthetase/ligase RAM_32020 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_32020 IPR036291 NAD(P)-binding domain superfamily RAM_32020 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_32020 IPR001242 Condensation domain RAM_32025 IPR001242 Condensation domain RAM_32025 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_32025 IPR010060 Non-ribosomal peptide synthase RAM_32025 IPR000873 AMP-dependent synthetase/ligase RAM_32025 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_32025 IPR036736 ACP-like superfamily RAM_32025 IPR010071 Amino acid adenylation domain RAM_32025 IPR042099 AMP-dependent synthetase-like superfamily RAM_32025 IPR006162 Phosphopantetheine attachment site RAM_32025 IPR020845 AMP-binding, conserved site RAM_32025 IPR025110 AMP-binding enzyme, C-terminal domain RAM_32025 IPR009081 Phosphopantetheine binding ACP domain RAM_32030 IPR001789 Signal transduction response regulator, receiver domain RAM_32030 IPR016032 Signal transduction response regulator, C-terminal effector RAM_32030 IPR011006 CheY-like superfamily RAM_32030 IPR000792 Transcription regulator LuxR, C-terminal RAM_32045 IPR036259 MFS transporter superfamily RAM_32045 IPR020846 Major facilitator superfamily domain RAM_32045 IPR011701 Major facilitator superfamily RAM_32055 IPR034746 POTRA domain RAM_32055 IPR013685 POTRA domain, FtsQ-type RAM_32055 IPR026579 Cell division protein FtsQ RAM_32055 IPR005548 Cell division protein FtsQ/DivIB RAM_32060 IPR005758 UDP-N-acetylmuramate--L-alanine ligase RAM_32060 IPR000713 Mur ligase, N-terminal catalytic domain RAM_32060 IPR013221 Mur ligase, central RAM_32060 IPR004101 Mur ligase, C-terminal RAM_32060 IPR036615 Mur ligase, C-terminal domain superfamily RAM_32060 IPR036565 Mur-like, catalytic domain superfamily RAM_32065 IPR006009 N-acetylglucosaminyltransferase, MurG RAM_32065 IPR007235 Glycosyl transferase, family 28, C-terminal RAM_32065 IPR004276 Glycosyltransferase family 28, N-terminal domain RAM_32070 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RAM_32070 IPR013437 Probable peptidoglycan glycosyltransferase FtsW RAM_32070 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA RAM_32075 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RAM_32075 IPR013221 Mur ligase, central RAM_32075 IPR036615 Mur ligase, C-terminal domain superfamily RAM_32075 IPR036565 Mur-like, catalytic domain superfamily RAM_32080 IPR000715 Glycosyl transferase, family 4 RAM_32080 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase RAM_32080 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RAM_32085 IPR036615 Mur ligase, C-terminal domain superfamily RAM_32085 IPR004101 Mur ligase, C-terminal RAM_32085 IPR036565 Mur-like, catalytic domain superfamily RAM_32085 IPR035911 MurE/MurF, N-terminal RAM_32085 IPR000713 Mur ligase, N-terminal catalytic domain RAM_32085 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase RAM_32085 IPR013221 Mur ligase, central RAM_32090 IPR004101 Mur ligase, C-terminal RAM_32090 IPR036565 Mur-like, catalytic domain superfamily RAM_32090 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase RAM_32090 IPR035911 MurE/MurF, N-terminal RAM_32090 IPR000713 Mur ligase, N-terminal catalytic domain RAM_32090 IPR013221 Mur ligase, central RAM_32090 IPR036615 Mur ligase, C-terminal domain superfamily RAM_32100 IPR001460 Penicillin-binding protein, transpeptidase RAM_32100 IPR036138 Penicillin-binding protein, dimerisation domain superfamily RAM_32100 IPR005311 Penicillin-binding protein, dimerisation domain RAM_32100 IPR012338 Beta-lactamase/transpeptidase-like RAM_32110 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily RAM_32110 IPR002903 Ribosomal RNA small subunit methyltransferase H RAM_32110 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_32115 IPR035642 MraZ, N-terminal RAM_32115 IPR038619 MraZ superfamily RAM_32115 IPR020603 MraZ domain RAM_32115 IPR035644 MraZ, C-terminal RAM_32115 IPR003444 Transcriptional regulator MraZ RAM_32115 IPR007159 SpoVT-AbrB domain RAM_32115 IPR037914 SpoVT-AbrB domain superfamily RAM_32145 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_32145 IPR011703 ATPase, AAA-3 RAM_32145 IPR041628 ChlI/MoxR, AAA lid domain RAM_32155 IPR002931 Transglutaminase-like RAM_32155 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal RAM_32155 IPR038765 Papain-like cysteine peptidase superfamily RAM_32155 IPR025403 Domain of unknown function DUF4129 RAM_32175 IPR025669 AAA domain RAM_32175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_32180 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain RAM_32180 IPR035937 MutM-like, N-terminal RAM_32180 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site RAM_32180 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type RAM_32180 IPR010979 Ribosomal protein S13-like, H2TH RAM_32180 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RAM_32185 IPR001365 Adenosine/AMP deaminase domain RAM_32185 IPR006330 Adenosine/adenine deaminase RAM_32185 IPR032466 Metal-dependent hydrolase RAM_32195 IPR001295 Dihydroorotate dehydrogenase, conserved site RAM_32195 IPR005720 Dihydroorotate dehydrogenase domain RAM_32195 IPR005719 Dihydroorotate dehydrogenase, class 2 RAM_32195 IPR013785 Aldolase-type TIM barrel RAM_32200 IPR000120 Amidase RAM_32200 IPR020556 Amidase, conserved site RAM_32200 IPR023631 Amidase signature domain RAM_32200 IPR036928 Amidase signature (AS) superfamily RAM_32215 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_32215 IPR001387 Cro/C1-type helix-turn-helix domain RAM_32220 IPR008135 Competence-induced protein CinA RAM_32220 IPR001453 MoaB/Mog domain RAM_32220 IPR036425 MoaB/Mog-like domain superfamily RAM_32220 IPR041424 CinA, KH domain RAM_32220 IPR008136 CinA, C-terminal RAM_32220 IPR036653 CinA-like, C-terminal RAM_32230 IPR023404 Radical SAM, alpha/beta horseshoe RAM_32230 IPR007197 Radical SAM RAM_32230 IPR002792 TRAM domain RAM_32230 IPR005840 Ribosomal protein S12 methylthiotransferase RimO RAM_32230 IPR041582 RimO, TRAM domain RAM_32230 IPR006638 Elp3/MiaB/NifB RAM_32230 IPR005839 Methylthiotransferase RAM_32230 IPR020612 Methylthiotransferase, conserved site RAM_32230 IPR013848 Methylthiotransferase, N-terminal RAM_32230 IPR038135 Methylthiotransferase, N-terminal domain superfamily RAM_32235 IPR016181 Acyl-CoA N-acyltransferase RAM_32235 IPR000182 GNAT domain RAM_32235 IPR010167 Amino-acid N-acetyltransferase RAM_32265 IPR002543 FtsK domain RAM_32265 IPR018541 FtsK gamma domain RAM_32265 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_32265 IPR025199 DNA translocase FtsK, 4TM region RAM_32265 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32265 IPR036390 Winged helix DNA-binding domain superfamily RAM_32265 IPR041027 FtsK alpha domain RAM_32275 IPR005025 NADPH-dependent FMN reductase-like RAM_32275 IPR029039 Flavoprotein-like superfamily RAM_32275 IPR008254 Flavodoxin/nitric oxide synthase RAM_32275 IPR010089 Flavoprotein WrbA-like RAM_32295 IPR011265 GABA permease RAM_32295 IPR004840 Amino acid permease, conserved site RAM_32295 IPR004841 Amino acid permease/ SLC12A domain RAM_32305 IPR041636 Ribonuclease J, C-terminal RAM_32305 IPR042173 Ribonuclease J, domain 2 RAM_32305 IPR004613 Ribonuclease J RAM_32305 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RAM_32305 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_32305 IPR030854 Ribonuclease J, bacteria RAM_32305 IPR001279 Metallo-beta-lactamase RAM_32310 IPR020624 Schiff base-forming aldolase, conserved site RAM_32310 IPR020625 Schiff base-forming aldolase, active site RAM_32310 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RAM_32310 IPR013785 Aldolase-type TIM barrel RAM_32310 IPR002220 DapA-like RAM_32315 IPR011009 Protein kinase-like domain superfamily RAM_32315 IPR000719 Protein kinase domain RAM_32315 IPR008271 Serine/threonine-protein kinase, active site RAM_32325 IPR001046 NRAMP family RAM_32325 IPR029039 Flavoprotein-like superfamily RAM_32325 IPR005025 NADPH-dependent FMN reductase-like RAM_32335 IPR003669 Thymidylate synthase ThyX RAM_32335 IPR036098 Thymidylate synthase ThyX superfamily RAM_32350 IPR009351 Protein of unknown function DUF1006 RAM_32375 IPR036390 Winged helix DNA-binding domain superfamily RAM_32375 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32375 IPR000847 Transcription regulator HTH, LysR RAM_32375 IPR005119 LysR, substrate-binding RAM_32380 IPR015168 SsuA/THI5-like RAM_32385 IPR019734 Tetratricopeptide repeat RAM_32385 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_32385 IPR013026 Tetratricopeptide repeat-containing domain RAM_32390 IPR023940 Dihydrodipicolinate reductase RAM_32390 IPR022663 Dihydrodipicolinate reductase, C-terminal RAM_32390 IPR000846 Dihydrodipicolinate reductase, N-terminal RAM_32390 IPR022664 Dihydrodipicolinate reductase, conserved site RAM_32390 IPR036291 NAD(P)-binding domain superfamily RAM_32395 IPR011765 Peptidase M16, N-terminal RAM_32395 IPR007863 Peptidase M16, C-terminal RAM_32395 IPR001431 Peptidase M16, zinc-binding site RAM_32395 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RAM_32400 IPR022967 RNA-binding domain, S1 RAM_32400 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily RAM_32400 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain RAM_32400 IPR027408 PNPase/RNase PH domain superfamily RAM_32400 IPR012162 Polyribonucleotide nucleotidyltransferase RAM_32400 IPR012340 Nucleic acid-binding, OB-fold RAM_32400 IPR036612 K Homology domain, type 1 superfamily RAM_32400 IPR004088 K Homology domain, type 1 RAM_32400 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_32400 IPR004087 K Homology domain RAM_32400 IPR001247 Exoribonuclease, phosphorolytic domain 1 RAM_32400 IPR036345 Exoribonuclease, PH domain 2 superfamily RAM_32400 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase RAM_32400 IPR003029 S1 domain RAM_32405 IPR009068 S15/NS1, RNA-binding RAM_32405 IPR000589 Ribosomal protein S15 RAM_32405 IPR005290 Ribosomal protein S15, bacterial-type RAM_32420 IPR023465 Riboflavin kinase domain superfamily RAM_32420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_32420 IPR002606 Riboflavin kinase, bacterial RAM_32420 IPR023468 Riboflavin kinase RAM_32420 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic RAM_32420 IPR015864 FAD synthetase RAM_32425 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal RAM_32425 IPR036974 PUA domain superfamily RAM_32425 IPR032819 tRNA pseudouridylate synthase B, C-terminal RAM_32425 IPR014780 tRNA pseudouridine synthase II, TruB RAM_32425 IPR020103 Pseudouridine synthase, catalytic domain superfamily RAM_32425 IPR002501 Pseudouridine synthase II, N-terminal RAM_32425 IPR015947 PUA-like superfamily RAM_32440 IPR020846 Major facilitator superfamily domain RAM_32440 IPR011701 Major facilitator superfamily RAM_32440 IPR036259 MFS transporter superfamily RAM_32450 IPR038763 DHH phosphoesterase superfamily RAM_32450 IPR001667 DDH domain RAM_32450 IPR003156 DHHA1 domain RAM_32455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_32455 IPR013216 Methyltransferase type 11 RAM_32460 IPR031905 Flotillin, C-terminal domain RAM_32460 IPR027705 Flotillin family RAM_32460 IPR036013 Band 7/SPFH domain superfamily RAM_32460 IPR001107 Band 7 domain RAM_32475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_32475 IPR013216 Methyltransferase type 11 RAM_32490 IPR000238 Ribosome-binding factor A RAM_32490 IPR015946 K homology domain-like, alpha/beta RAM_32490 IPR020053 Ribosome-binding factor A, conserved site RAM_32490 IPR023799 Ribosome-binding factor A domain superfamily RAM_32500 IPR009000 Translation protein, beta-barrel domain superfamily RAM_32500 IPR006847 Translation initiation factor IF-2, N-terminal RAM_32500 IPR023115 Translation initiation factor IF- 2, domain 3 RAM_32500 IPR036925 Translation initiation factor IF-2, domain 3 superfamily RAM_32500 IPR000178 Translation initiation factor aIF-2, bacterial-like RAM_32500 IPR015760 Translation initiation factor IF- 2 RAM_32500 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_32500 IPR005225 Small GTP-binding protein domain RAM_32500 IPR000795 Transcription factor, GTP-binding domain RAM_32510 IPR010213 Transcription termination factor NusA RAM_32510 IPR013735 Transcription factor NusA, N-terminal RAM_32510 IPR025249 KH domain, NusA-like RAM_32510 IPR003029 S1 domain RAM_32510 IPR036555 NusA, N-terminal domain superfamily RAM_32510 IPR030842 Transcription termination/antitermination protein NusA, bacterial RAM_32510 IPR015946 K homology domain-like, alpha/beta RAM_32510 IPR009019 K homology domain superfamily, prokaryotic type RAM_32510 IPR012340 Nucleic acid-binding, OB-fold RAM_32515 IPR028989 Ribosome maturation factor RimP, N-terminal RAM_32515 IPR035956 RimP, N-terminal domain superfamily RAM_32515 IPR028998 Ribosome maturation factor RimP, C-terminal RAM_32515 IPR003728 Ribosome maturation factor RimP RAM_32535 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RAM_32535 IPR040442 Pyruvate kinase-like domain superfamily RAM_32535 IPR039556 ICL/PEPM domain RAM_32545 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_32545 IPR009057 Homeobox-like domain superfamily RAM_32545 IPR001647 DNA-binding HTH domain, TetR-type RAM_32545 IPR039538 BetI-type transcriptional repressor, C-terminal RAM_32545 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_32555 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_32555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_32560 IPR001789 Signal transduction response regulator, receiver domain RAM_32560 IPR016032 Signal transduction response regulator, C-terminal effector RAM_32560 IPR011006 CheY-like superfamily RAM_32560 IPR000792 Transcription regulator LuxR, C-terminal RAM_32570 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32570 IPR002577 Helix-turn-helix, HxlR type RAM_32570 IPR036390 Winged helix DNA-binding domain superfamily RAM_32580 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_32580 IPR001647 DNA-binding HTH domain, TetR-type RAM_32580 IPR009057 Homeobox-like domain superfamily RAM_32585 IPR008979 Galactose-binding-like domain superfamily RAM_32585 IPR029058 Alpha/Beta hydrolase fold RAM_32585 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain RAM_32585 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal RAM_32600 IPR001789 Signal transduction response regulator, receiver domain RAM_32600 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32600 IPR039420 Transcriptional regulatory protein WalR-like RAM_32600 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_32600 IPR016032 Signal transduction response regulator, C-terminal effector RAM_32600 IPR011006 CheY-like superfamily RAM_32605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_32605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_32605 IPR003594 Histidine kinase/HSP90-like ATPase RAM_32605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_32605 IPR005467 Histidine kinase domain RAM_32605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_32615 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_32615 IPR016032 Signal transduction response regulator, C-terminal effector RAM_32615 IPR005158 Bacterial transcriptional activator domain RAM_32615 IPR013026 Tetratricopeptide repeat-containing domain RAM_32615 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_32615 IPR002182 NB-ARC RAM_32615 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_32615 IPR019734 Tetratricopeptide repeat RAM_32615 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32635 IPR000847 Transcription regulator HTH, LysR RAM_32635 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32635 IPR005119 LysR, substrate-binding RAM_32635 IPR036390 Winged helix DNA-binding domain superfamily RAM_32640 IPR017659 Formyl-CoA:oxalate CoA-transferase RAM_32640 IPR023606 CoA-transferase family III domain superfamily RAM_32640 IPR003673 CoA-transferase family III RAM_32645 IPR022852 Carnitinyl-CoA dehydratase RAM_32645 IPR001753 Enoyl-CoA hydratase/isomerase RAM_32645 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_32645 IPR029045 ClpP/crotonase-like domain superfamily RAM_32645 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_32650 IPR023375 Acetoacetate decarboxylase domain superfamily RAM_32650 IPR023653 Acetoacetate decarboxylase, bacterial RAM_32650 IPR010451 Acetoacetate decarboxylase RAM_32655 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_32655 IPR026578 L-carnitine dehydrogenase RAM_32655 IPR036291 NAD(P)-binding domain superfamily RAM_32655 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_32655 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_32655 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_32660 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_32660 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_32660 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_32660 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_32660 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_32660 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_32660 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_32665 IPR004474 Cell envelope-related transcriptional attenuator domain RAM_32665 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain RAM_32670 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_32670 IPR036291 NAD(P)-binding domain superfamily RAM_32670 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_32675 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32675 IPR007627 RNA polymerase sigma-70 region 2 RAM_32675 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_32675 IPR013325 RNA polymerase sigma factor, region 2 RAM_32675 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_32675 IPR037401 SnoaL-like domain RAM_32675 IPR032710 NTF2-like domain superfamily RAM_32675 IPR039425 RNA polymerase sigma-70 like RAM_32675 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_32675 IPR014284 RNA polymerase sigma-70 like domain RAM_32675 IPR014305 RNA polymerase sigma-G type, actinobacteria RAM_32680 IPR034768 WhiB-like iron-sulfur binding domain RAM_32680 IPR003482 Transcription factor WhiB RAM_32690 IPR014284 RNA polymerase sigma-70 like domain RAM_32690 IPR039425 RNA polymerase sigma-70 like RAM_32690 IPR007627 RNA polymerase sigma-70 region 2 RAM_32690 IPR013325 RNA polymerase sigma factor, region 2 RAM_32690 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32690 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_32690 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_32690 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_32695 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32695 IPR036390 Winged helix DNA-binding domain superfamily RAM_32695 IPR000847 Transcription regulator HTH, LysR RAM_32695 IPR005119 LysR, substrate-binding RAM_32700 IPR038770 Sodium/solute symporter superfamily RAM_32700 IPR016833 Putative sodium bile acid cotransporter RAM_32710 IPR008972 Cupredoxin RAM_32710 IPR002355 Multicopper oxidase, copper-binding site RAM_32710 IPR033138 Multicopper oxidases, conserved site RAM_32710 IPR011707 Multicopper oxidase, type 3 RAM_32710 IPR011706 Multicopper oxidase, type 2 RAM_32715 IPR002397 Cytochrome P450, B-class RAM_32715 IPR001128 Cytochrome P450 RAM_32715 IPR036396 Cytochrome P450 superfamily RAM_32715 IPR017972 Cytochrome P450, conserved site RAM_32740 IPR011991 ArsR-like helix-turn-helix domain RAM_32740 IPR001845 HTH ArsR-type DNA-binding domain RAM_32740 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32740 IPR036390 Winged helix DNA-binding domain superfamily RAM_32755 IPR005158 Bacterial transcriptional activator domain RAM_32755 IPR016032 Signal transduction response regulator, C-terminal effector RAM_32755 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_32755 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_32755 IPR019734 Tetratricopeptide repeat RAM_32755 IPR013026 Tetratricopeptide repeat-containing domain RAM_32755 IPR002182 NB-ARC RAM_32755 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_32760 IPR005877 YSIRK Gram-positive signal peptide RAM_32760 IPR041171 SDR-like Ig domain RAM_32760 IPR033764 SD-repeat containing protein, B domain RAM_32760 IPR008966 Adhesion domain superfamily RAM_32760 IPR019931 LPXTG cell wall anchor domain RAM_32760 IPR011252 Fibrogen-binding domain 1 RAM_32760 IPR019948 Gram-positive LPXTG cell wall anchor RAM_32760 IPR013783 Immunoglobulin-like fold RAM_32790 IPR015424 Pyridoxal phosphate-dependent transferase RAM_32790 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_32790 IPR000192 Aminotransferase class V domain RAM_32790 IPR010111 Kynureninase RAM_32790 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_32800 IPR000073 Alpha/beta hydrolase fold-1 RAM_32800 IPR023594 Haloalkane dehalogenase, subfamily 2 RAM_32800 IPR029058 Alpha/Beta hydrolase fold RAM_32810 IPR005804 Fatty acid desaturase domain RAM_32810 IPR033885 Alkane/xylene monooxygenase RAM_32850 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_32850 IPR037401 SnoaL-like domain RAM_32850 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32850 IPR032710 NTF2-like domain superfamily RAM_32850 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_32850 IPR007627 RNA polymerase sigma-70 region 2 RAM_32850 IPR014284 RNA polymerase sigma-70 like domain RAM_32850 IPR013325 RNA polymerase sigma factor, region 2 RAM_32865 IPR001647 DNA-binding HTH domain, TetR-type RAM_32865 IPR011075 Tetracyclin repressor-like, C-terminal domain RAM_32865 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_32865 IPR009057 Homeobox-like domain superfamily RAM_32880 IPR006710 Glycoside hydrolase, family 43 RAM_32880 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RAM_32880 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain RAM_32880 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RAM_32895 IPR007627 RNA polymerase sigma-70 region 2 RAM_32895 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_32895 IPR013325 RNA polymerase sigma factor, region 2 RAM_32895 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_32895 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_32895 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_32895 IPR014284 RNA polymerase sigma-70 like domain RAM_32900 IPR011008 Dimeric alpha-beta barrel RAM_32900 IPR005545 YCII-related RAM_32905 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase RAM_32905 IPR000073 Alpha/beta hydrolase fold-1 RAM_32905 IPR029058 Alpha/Beta hydrolase fold RAM_32910 IPR001647 DNA-binding HTH domain, TetR-type RAM_32910 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_32910 IPR009057 Homeobox-like domain superfamily RAM_32915 IPR013149 Alcohol dehydrogenase, C-terminal RAM_32915 IPR013154 Alcohol dehydrogenase, N-terminal RAM_32915 IPR011032 GroES-like superfamily RAM_32915 IPR036291 NAD(P)-binding domain superfamily RAM_32915 IPR020843 Polyketide synthase, enoylreductase domain RAM_32940 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily RAM_32940 IPR018181 Heat shock protein 70, conserved site RAM_32940 IPR013126 Heat shock protein 70 family RAM_32940 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RAM_32940 IPR012725 Chaperone DnaK RAM_32955 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_32955 IPR006680 Amidohydrolase-related RAM_32955 IPR032466 Metal-dependent hydrolase RAM_32955 IPR005920 Imidazolonepropionase RAM_32970 IPR001000 Glycoside hydrolase family 10 domain RAM_32970 IPR035992 Ricin B-like lectins RAM_32970 IPR000772 Ricin B, lectin domain RAM_32970 IPR017853 Glycoside hydrolase superfamily RAM_32970 IPR031158 Glycosyl hydrolases family 10, active site RAM_32975 IPR017853 Glycoside hydrolase superfamily RAM_32975 IPR001000 Glycoside hydrolase family 10 domain RAM_32975 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_32975 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_32975 IPR001919 Carbohydrate-binding type-2 domain RAM_33000 IPR004722 Dihydroorotase RAM_33000 IPR006680 Amidohydrolase-related RAM_33000 IPR002195 Dihydroorotase, conserved site RAM_33000 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_33000 IPR032466 Metal-dependent hydrolase RAM_33005 IPR017972 Cytochrome P450, conserved site RAM_33005 IPR036396 Cytochrome P450 superfamily RAM_33005 IPR002397 Cytochrome P450, B-class RAM_33005 IPR001128 Cytochrome P450 RAM_33030 IPR000792 Transcription regulator LuxR, C-terminal RAM_33030 IPR011006 CheY-like superfamily RAM_33030 IPR016032 Signal transduction response regulator, C-terminal effector RAM_33030 IPR001789 Signal transduction response regulator, receiver domain RAM_33045 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_33045 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_33045 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_33045 IPR005158 Bacterial transcriptional activator domain RAM_33045 IPR016032 Signal transduction response regulator, C-terminal effector RAM_33060 IPR036514 SGNH hydrolase superfamily RAM_33060 IPR002656 Acyltransferase 3 RAM_33105 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_33105 IPR005158 Bacterial transcriptional activator domain RAM_33105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_33105 IPR002182 NB-ARC RAM_33105 IPR019734 Tetratricopeptide repeat RAM_33105 IPR013026 Tetratricopeptide repeat-containing domain RAM_33105 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_33105 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_33105 IPR016032 Signal transduction response regulator, C-terminal effector RAM_33135 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_33135 IPR023210 NADP-dependent oxidoreductase domain RAM_33145 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_33145 IPR041664 Orc1-like, AAA ATPase domain RAM_33145 IPR000719 Protein kinase domain RAM_33145 IPR017441 Protein kinase, ATP binding site RAM_33145 IPR016236 Serine/threonine-protein kinase PknK, predicted RAM_33145 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_33145 IPR011009 Protein kinase-like domain superfamily RAM_33150 IPR002888 [2Fe-2S]-binding RAM_33150 IPR036884 [2Fe-2S]-binding domain superfamily RAM_33150 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_33150 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_33150 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_33160 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_33160 IPR023768 Transcriptional regulator HTH-type, MalT RAM_33160 IPR016032 Signal transduction response regulator, C-terminal effector RAM_33160 IPR041617 MalT-like TPR region RAM_33160 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_33160 IPR000792 Transcription regulator LuxR, C-terminal RAM_33160 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_33165 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_33165 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_33165 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_33165 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_33165 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_33165 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_33165 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_33170 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain RAM_33170 IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II RAM_33170 IPR029058 Alpha/Beta hydrolase fold RAM_33175 IPR029058 Alpha/Beta hydrolase fold RAM_33175 IPR000073 Alpha/beta hydrolase fold-1 RAM_33175 IPR011942 Poly(3-hydroxyalkanoate) depolymerase RAM_33180 IPR042099 AMP-dependent synthetase-like superfamily RAM_33180 IPR025110 AMP-binding enzyme, C-terminal domain RAM_33180 IPR020459 AMP-binding RAM_33180 IPR000873 AMP-dependent synthetase/ligase RAM_33180 IPR020845 AMP-binding, conserved site RAM_33185 IPR016292 Epoxide hydrolase RAM_33185 IPR000639 Epoxide hydrolase-like RAM_33185 IPR000073 Alpha/beta hydrolase fold-1 RAM_33185 IPR029058 Alpha/Beta hydrolase fold RAM_33195 IPR029058 Alpha/Beta hydrolase fold RAM_33195 IPR000073 Alpha/beta hydrolase fold-1 RAM_33195 IPR000639 Epoxide hydrolase-like RAM_33200 IPR016032 Signal transduction response regulator, C-terminal effector RAM_33200 IPR011006 CheY-like superfamily RAM_33200 IPR000792 Transcription regulator LuxR, C-terminal RAM_33200 IPR001789 Signal transduction response regulator, receiver domain RAM_33205 IPR016032 Signal transduction response regulator, C-terminal effector RAM_33205 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_33205 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_33205 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_33205 IPR000792 Transcription regulator LuxR, C-terminal RAM_33210 IPR011701 Major facilitator superfamily RAM_33210 IPR020846 Major facilitator superfamily domain RAM_33210 IPR036259 MFS transporter superfamily RAM_33210 IPR005829 Sugar transporter, conserved site RAM_33225 IPR004736 MFS transporter, metabolite:H symporter RAM_33225 IPR005829 Sugar transporter, conserved site RAM_33225 IPR036259 MFS transporter superfamily RAM_33225 IPR005828 Major facilitator, sugar transporter-like RAM_33225 IPR020846 Major facilitator superfamily domain RAM_33225 IPR011701 Major facilitator superfamily RAM_33270 IPR003593 AAA+ ATPase domain RAM_33270 IPR017871 ABC transporter, conserved site RAM_33270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_33270 IPR003439 ABC transporter-like RAM_33280 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_33280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_33280 IPR003594 Histidine kinase/HSP90-like ATPase RAM_33285 IPR016032 Signal transduction response regulator, C-terminal effector RAM_33285 IPR011006 CheY-like superfamily RAM_33285 IPR001789 Signal transduction response regulator, receiver domain RAM_33285 IPR000792 Transcription regulator LuxR, C-terminal RAM_33310 IPR032816 SNARE associated Golgi protein RAM_33310 IPR032818 DedA family RAM_33320 IPR003824 Undecaprenyl-diphosphatase UppP RAM_33335 IPR036908 RlpA-like domain superfamily RAM_33350 IPR017871 ABC transporter, conserved site RAM_33350 IPR003439 ABC transporter-like RAM_33350 IPR003593 AAA+ ATPase domain RAM_33350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_33360 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_33360 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_33365 IPR011006 CheY-like superfamily RAM_33365 IPR000792 Transcription regulator LuxR, C-terminal RAM_33365 IPR001789 Signal transduction response regulator, receiver domain RAM_33365 IPR016032 Signal transduction response regulator, C-terminal effector RAM_33375 IPR001789 Signal transduction response regulator, receiver domain RAM_33375 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase RAM_33375 IPR011006 CheY-like superfamily RAM_33375 IPR035909 Methylesterase CheB, C-terminal RAM_33375 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type RAM_33390 IPR009057 Homeobox-like domain superfamily RAM_33390 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_33390 IPR013570 Transcription regulator YsiA, C-terminal RAM_33390 IPR001647 DNA-binding HTH domain, TetR-type RAM_33395 IPR001509 NAD-dependent epimerase/dehydratase RAM_33395 IPR036291 NAD(P)-binding domain superfamily RAM_33405 IPR008030 NmrA-like domain RAM_33405 IPR036291 NAD(P)-binding domain superfamily RAM_33420 IPR029058 Alpha/Beta hydrolase fold RAM_33420 IPR013094 Alpha/beta hydrolase fold-3 RAM_33425 IPR013094 Alpha/beta hydrolase fold-3 RAM_33425 IPR029058 Alpha/Beta hydrolase fold RAM_33430 IPR036259 MFS transporter superfamily RAM_33430 IPR020846 Major facilitator superfamily domain RAM_33430 IPR011701 Major facilitator superfamily RAM_33430 IPR004638 Drug resistance transporter EmrB-like RAM_33435 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_33435 IPR036291 NAD(P)-binding domain superfamily RAM_33455 IPR018062 HTH domain AraC-type, conserved site RAM_33455 IPR009057 Homeobox-like domain superfamily RAM_33455 IPR029062 Class I glutamine amidotransferase-like RAM_33455 IPR018060 DNA binding HTH domain, AraC-type RAM_33455 IPR002818 DJ-1/PfpI RAM_33455 IPR020449 Transcription regulator HTH, AraC- type RAM_33480 IPR023299 P-type ATPase, cytoplasmic domain N RAM_33480 IPR023298 P-type ATPase, transmembrane domain superfamily RAM_33480 IPR008250 P-type ATPase, A domain superfamily RAM_33480 IPR000579 Cation-transporting P-type ATPase A/B RAM_33480 IPR036412 HAD-like superfamily RAM_33480 IPR023214 HAD superfamily RAM_33480 IPR017969 Heavy-metal-associated, conserved site RAM_33480 IPR006121 Heavy metal-associated domain, HMA RAM_33480 IPR036163 Heavy metal-associated domain superfamily RAM_33480 IPR027256 P-type ATPase, subfamily IB RAM_33480 IPR001757 P-type ATPase RAM_33480 IPR018303 P-type ATPase, phosphorylation site RAM_33490 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_33490 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_33490 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_33490 IPR013325 RNA polymerase sigma factor, region 2 RAM_33490 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_33490 IPR039425 RNA polymerase sigma-70 like RAM_33490 IPR014284 RNA polymerase sigma-70 like domain RAM_33490 IPR007627 RNA polymerase sigma-70 region 2 RAM_33495 IPR013325 RNA polymerase sigma factor, region 2 RAM_33495 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_33495 IPR007627 RNA polymerase sigma-70 region 2 RAM_33495 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_33495 IPR014284 RNA polymerase sigma-70 like domain RAM_33495 IPR039425 RNA polymerase sigma-70 like RAM_33495 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_33495 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_33505 IPR029062 Class I glutamine amidotransferase-like RAM_33505 IPR002818 DJ-1/PfpI RAM_33510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_33510 IPR003593 AAA+ ATPase domain RAM_33510 IPR003439 ABC transporter-like RAM_33510 IPR017871 ABC transporter, conserved site RAM_33515 IPR037294 ABC transporter, BtuC-like RAM_33515 IPR000522 ABC transporter, permease protein, BtuC-like RAM_33530 IPR000579 Cation-transporting P-type ATPase A/B RAM_33530 IPR006121 Heavy metal-associated domain, HMA RAM_33530 IPR001757 P-type ATPase RAM_33530 IPR027256 P-type ATPase, subfamily IB RAM_33530 IPR036163 Heavy metal-associated domain superfamily RAM_33530 IPR023299 P-type ATPase, cytoplasmic domain N RAM_33530 IPR018303 P-type ATPase, phosphorylation site RAM_33530 IPR017969 Heavy-metal-associated, conserved site RAM_33530 IPR023214 HAD superfamily RAM_33530 IPR023298 P-type ATPase, transmembrane domain superfamily RAM_33530 IPR008250 P-type ATPase, A domain superfamily RAM_33530 IPR036412 HAD-like superfamily RAM_33545 IPR016174 Di-haem cytochrome, transmembrane RAM_33545 IPR027387 Cytochrome b/b6-like domain superfamily RAM_33545 IPR005797 Cytochrome b/b6, N-terminal RAM_33635 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain RAM_33635 IPR006656 Molybdopterin oxidoreductase RAM_33635 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RAM_33635 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_33635 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RAM_33635 IPR010051 Periplasmic nitrate reductase, large subunit RAM_33635 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_33635 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RAM_33635 IPR006657 Molybdopterin dinucleotide-binding domain RAM_33650 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RAM_33650 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_33650 IPR011032 GroES-like superfamily RAM_33650 IPR014184 Formaldehyde dehydrogenase, glutathione-independent RAM_33650 IPR036291 NAD(P)-binding domain superfamily RAM_33650 IPR013154 Alcohol dehydrogenase, N-terminal RAM_33660 IPR036347 Erythronolide synthase, docking domain superfamily RAM_33660 IPR001227 Acyl transferase domain superfamily RAM_33660 IPR018201 Beta-ketoacyl synthase, active site RAM_33660 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_33660 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_33660 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_33660 IPR036291 NAD(P)-binding domain superfamily RAM_33660 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_33660 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_33660 IPR020807 Polyketide synthase, dehydratase domain RAM_33660 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_33660 IPR020843 Polyketide synthase, enoylreductase domain RAM_33660 IPR013968 Polyketide synthase, ketoreductase domain RAM_33660 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_33660 IPR015083 Polyketide synthase, docking domain RAM_33660 IPR009081 Phosphopantetheine binding ACP domain RAM_33660 IPR006162 Phosphopantetheine attachment site RAM_33660 IPR016039 Thiolase-like RAM_33660 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_33660 IPR014043 Acyl transferase RAM_33660 IPR036736 ACP-like superfamily RAM_33660 IPR011032 GroES-like superfamily RAM_33660 IPR015357 Erythronolide synthase, docking RAM_33660 IPR013154 Alcohol dehydrogenase, N-terminal RAM_33675 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_33675 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_33675 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_33675 IPR016160 Aldehyde dehydrogenase, cysteine active site RAM_33675 IPR016161 Aldehyde/histidinol dehydrogenase RAM_33675 IPR015590 Aldehyde dehydrogenase domain RAM_33685 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_33685 IPR029061 Thiamin diphosphate-binding fold RAM_33685 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_33685 IPR000399 TPP-binding enzyme, conserved site RAM_33685 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_33685 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_33690 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_33690 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_33690 IPR029065 Enolase C-terminal domain-like RAM_33690 IPR036849 Enolase-like, C-terminal domain superfamily RAM_33690 IPR034382 3,6-anhydro-alpha-L-galactonate cycloisomerase RAM_33690 IPR029017 Enolase-like, N-terminal RAM_33695 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_33695 IPR006094 FAD linked oxidase, N-terminal RAM_33695 IPR016166 FAD-binding domain, PCMH-type RAM_33695 IPR036318 FAD-binding, type PCMH-like superfamily RAM_33695 IPR016164 FAD-linked oxidase-like, C-terminal RAM_33695 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_33695 IPR009051 Alpha-helical ferredoxin RAM_33695 IPR004113 FAD-linked oxidase, C-terminal RAM_33715 IPR036291 NAD(P)-binding domain superfamily RAM_33715 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RAM_33715 IPR011548 3-hydroxyisobutyrate dehydrogenase RAM_33715 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RAM_33715 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_33715 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_33715 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RAM_33715 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RAM_33725 IPR023865 Aliphatic acid kinase, short-chain, conserved site RAM_33725 IPR000890 Aliphatic acid kinase, short-chain RAM_33725 IPR004372 Acetate/propionate kinase RAM_33730 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase RAM_33730 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_33730 IPR023962 Probable phosphoketolase RAM_33730 IPR029061 Thiamin diphosphate-binding fold RAM_33730 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site RAM_33730 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal RAM_33730 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site RAM_33730 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal RAM_33740 IPR007544 Encapsulating protein for peroxidase RAM_33745 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_33745 IPR013149 Alcohol dehydrogenase, C-terminal RAM_33745 IPR013154 Alcohol dehydrogenase, N-terminal RAM_33745 IPR027399 Alcohol dehydrogenase GroES-associated RAM_33745 IPR036291 NAD(P)-binding domain superfamily RAM_33745 IPR011032 GroES-like superfamily RAM_33765 IPR004680 Citrate transporter-like domain RAM_33765 IPR000802 Arsenical pump membrane protein, ArsB RAM_33770 IPR003593 AAA+ ATPase domain RAM_33770 IPR003439 ABC transporter-like RAM_33770 IPR017871 ABC transporter, conserved site RAM_33770 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_33785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_33785 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal RAM_33785 IPR023506 Trans-aconitate 2-methyltransferase RAM_33795 IPR036977 DNA Primase, CHC2-type zinc finger RAM_33795 IPR030846 DNA primase DnaG, bacteria RAM_33795 IPR006171 TOPRIM domain RAM_33795 IPR013173 DNA primase DnaG, DnaB-binding domain RAM_33795 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily RAM_33795 IPR034151 Bacterial DnaG primase, TOPRIM domain RAM_33795 IPR006295 DNA primase, DnaG RAM_33795 IPR002694 Zinc finger, CHC2-type RAM_33795 IPR019475 DNA primase, DnaB-helicase binding domain RAM_33795 IPR013264 DNA primase, catalytic core, N-terminal RAM_33800 IPR007627 RNA polymerase sigma-70 region 2 RAM_33800 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_33800 IPR037401 SnoaL-like domain RAM_33800 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_33800 IPR014284 RNA polymerase sigma-70 like domain RAM_33800 IPR013325 RNA polymerase sigma factor, region 2 RAM_33800 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_33800 IPR032710 NTF2-like domain superfamily RAM_33815 IPR011701 Major facilitator superfamily RAM_33815 IPR005829 Sugar transporter, conserved site RAM_33815 IPR004638 Drug resistance transporter EmrB-like RAM_33815 IPR020846 Major facilitator superfamily domain RAM_33815 IPR036259 MFS transporter superfamily RAM_33835 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_33835 IPR007061 Protein of unknown function DUF664 RAM_33855 IPR006261 dNTP triphosphohydrolase RAM_33855 IPR003607 HD/PDEase domain RAM_33855 IPR023023 dNTP triphosphohydrolase, type 2 RAM_33855 IPR026875 Phosphohydrolase-associated domain RAM_33855 IPR006674 HD domain RAM_33865 IPR001789 Signal transduction response regulator, receiver domain RAM_33865 IPR000792 Transcription regulator LuxR, C-terminal RAM_33865 IPR016032 Signal transduction response regulator, C-terminal effector RAM_33865 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_33865 IPR011006 CheY-like superfamily RAM_33870 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_33870 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_33880 IPR003593 AAA+ ATPase domain RAM_33880 IPR003439 ABC transporter-like RAM_33880 IPR017871 ABC transporter, conserved site RAM_33880 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_33885 IPR036621 Anticodon-binding domain superfamily RAM_33885 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_33885 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RAM_33885 IPR022961 Glycine-tRNA ligase, bacterial RAM_33885 IPR033731 Glycyl-tRNA synthetase-like core domain RAM_33885 IPR002315 Glycyl-tRNA synthetase RAM_33885 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 RAM_33885 IPR004154 Anticodon-binding RAM_33905 IPR036390 Winged helix DNA-binding domain superfamily RAM_33905 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_33905 IPR001845 HTH ArsR-type DNA-binding domain RAM_33905 IPR011991 ArsR-like helix-turn-helix domain RAM_33910 IPR002481 Ferric-uptake regulator RAM_33910 IPR036390 Winged helix DNA-binding domain superfamily RAM_33910 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_33925 IPR005524 Predicted permease DUF318 RAM_33935 IPR036424 Decaprenyl diphosphate synthase-like superfamily RAM_33935 IPR001441 Decaprenyl diphosphate synthase-like RAM_33935 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RAM_33940 IPR003717 Recombination protein O, RecO RAM_33940 IPR012340 Nucleic acid-binding, OB-fold RAM_33940 IPR022572 DNA replication/recombination mediator RecO, N-terminal RAM_33940 IPR037278 ARFGAP/RecO-like zinc finger RAM_33950 IPR010432 RDD RAM_33970 IPR030388 Era-type guanine nucleotide-binding (G) domain RAM_33970 IPR005662 GTP-binding protein Era RAM_33970 IPR006073 GTP binding domain RAM_33970 IPR015946 K homology domain-like, alpha/beta RAM_33970 IPR004044 K Homology domain, type 2 RAM_33970 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_33970 IPR005225 Small GTP-binding protein domain RAM_33970 IPR009019 K homology domain superfamily, prokaryotic type RAM_33980 IPR000644 CBS domain RAM_33980 IPR036318 FAD-binding, type PCMH-like superfamily RAM_33980 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_33980 IPR005170 Transporter-associated domain RAM_33980 IPR002550 CNNM, transmembrane domain RAM_33985 IPR023091 Metalloprotease catalytic domain superfamily, predicted RAM_33985 IPR002036 Endoribonuclease YbeY RAM_33985 IPR020549 Endoribonuclease YbeY, conserved site RAM_33990 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_33990 IPR003714 PhoH-like protein RAM_33990 IPR004087 K Homology domain RAM_33990 IPR036612 K Homology domain, type 1 superfamily RAM_34000 IPR011146 HIT-like domain RAM_34000 IPR036265 HIT-like superfamily RAM_34000 IPR019808 Histidine triad, conserved site RAM_34000 IPR001310 Histidine triad (HIT) protein RAM_34005 IPR029028 Alpha/beta knot methyltransferases RAM_34005 IPR006700 Ribosomal RNA small subunit methyltransferase E RAM_34005 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RAM_34005 IPR015947 PUA-like superfamily RAM_34010 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily RAM_34010 IPR008971 HSP40/DnaJ peptide-binding RAM_34010 IPR002939 Chaperone DnaJ, C-terminal RAM_34010 IPR012724 Chaperone DnaJ RAM_34010 IPR036869 Chaperone J-domain superfamily RAM_34010 IPR001623 DnaJ domain RAM_34010 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RAM_34015 IPR036390 Winged helix DNA-binding domain superfamily RAM_34015 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily RAM_34015 IPR029016 GAF-like domain superfamily RAM_34015 IPR002571 Heat-inducible transcription repressor HrcA RAM_34015 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal RAM_34015 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_34040 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_34040 IPR023210 NADP-dependent oxidoreductase domain RAM_34045 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_34045 IPR010061 Methylmalonate-semialdehyde dehydrogenase RAM_34045 IPR016160 Aldehyde dehydrogenase, cysteine active site RAM_34045 IPR016161 Aldehyde/histidinol dehydrogenase RAM_34045 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_34045 IPR015590 Aldehyde dehydrogenase domain RAM_34075 IPR005467 Histidine kinase domain RAM_34075 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_34075 IPR003594 Histidine kinase/HSP90-like ATPase RAM_34075 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_34075 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_34075 IPR003660 HAMP domain RAM_34075 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_34080 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_34080 IPR011006 CheY-like superfamily RAM_34080 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_34080 IPR039420 Transcriptional regulatory protein WalR-like RAM_34080 IPR001789 Signal transduction response regulator, receiver domain RAM_34080 IPR016032 Signal transduction response regulator, C-terminal effector RAM_34085 IPR001248 Purine-cytosine permease RAM_34085 IPR012681 Nucleobase cation symporter-1, NCS1 RAM_34085 IPR038271 Purine-cytosine permease superfamily RAM_34095 IPR032466 Metal-dependent hydrolase RAM_34095 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_34095 IPR011778 Hydantoinase/dihydropyrimidinase RAM_34095 IPR006680 Amidohydrolase-related RAM_34105 IPR000073 Alpha/beta hydrolase fold-1 RAM_34105 IPR029058 Alpha/Beta hydrolase fold RAM_34110 IPR012338 Beta-lactamase/transpeptidase-like RAM_34110 IPR001466 Beta-lactamase-related RAM_34115 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_34115 IPR013113 FAD-binding 9, siderophore-interacting RAM_34115 IPR007037 Siderophore-interacting protein, C-terminal domain RAM_34115 IPR039374 Siderophore-interacting protein RAM_34115 IPR017938 Riboflavin synthase-like beta-barrel RAM_34115 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_34130 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_34130 IPR004111 Tetracycline repressor TetR, C-terminal RAM_34130 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_34130 IPR001647 DNA-binding HTH domain, TetR-type RAM_34130 IPR003012 Tetracycline transcriptional regulator, TetR RAM_34130 IPR009057 Homeobox-like domain superfamily RAM_34135 IPR036291 NAD(P)-binding domain superfamily RAM_34135 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_34135 IPR013149 Alcohol dehydrogenase, C-terminal RAM_34135 IPR011032 GroES-like superfamily RAM_34135 IPR013154 Alcohol dehydrogenase, N-terminal RAM_34135 IPR020843 Polyketide synthase, enoylreductase domain RAM_34140 IPR023404 Radical SAM, alpha/beta horseshoe RAM_34140 IPR007197 Radical SAM RAM_34140 IPR004559 Heme chaperone HemW-like RAM_34140 IPR006638 Elp3/MiaB/NifB RAM_34140 IPR034505 Anaerobic coproporphyrinogen-III oxidase RAM_34150 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RAM_34150 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site RAM_34150 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RAM_34150 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily RAM_34160 IPR011798 Adenosine 5'-phosphosulphate reductase RAM_34160 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase RAM_34160 IPR002500 Phosphoadenosine phosphosulphate reductase RAM_34160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_34165 IPR011784 Sulphate adenylyltransferase, small subunit RAM_34165 IPR002500 Phosphoadenosine phosphosulphate reductase RAM_34165 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_34170 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain RAM_34170 IPR009000 Translation protein, beta-barrel domain superfamily RAM_34170 IPR002891 Adenylyl-sulfate kinase RAM_34170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_34170 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RAM_34170 IPR031157 Tr-type G domain, conserved site RAM_34170 IPR000795 Transcription factor, GTP-binding domain RAM_34170 IPR011779 Sulphate adenylyltransferase, large subunit RAM_34185 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_34185 IPR020575 Heat shock protein Hsp90, N-terminal RAM_34185 IPR003594 Histidine kinase/HSP90-like ATPase RAM_34185 IPR001404 Heat shock protein Hsp90 family RAM_34185 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_34185 IPR019805 Heat shock protein Hsp90, conserved site RAM_34200 IPR029045 ClpP/crotonase-like domain superfamily RAM_34200 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_34200 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_34200 IPR001753 Enoyl-CoA hydratase/isomerase RAM_34205 IPR035905 Barstar-like superfamily RAM_34205 IPR000468 Barstar (barnase inhibitor) RAM_34210 IPR016191 Ribonuclease/ribotoxin RAM_34210 IPR000026 Guanine-specific ribonuclease N1/T1/U2 RAM_34220 IPR013149 Alcohol dehydrogenase, C-terminal RAM_34220 IPR013154 Alcohol dehydrogenase, N-terminal RAM_34220 IPR036291 NAD(P)-binding domain superfamily RAM_34220 IPR020843 Polyketide synthase, enoylreductase domain RAM_34220 IPR011032 GroES-like superfamily RAM_34230 IPR002293 Amino acid/polyamine transporter I RAM_34235 IPR004136 Nitronate monooxygenase RAM_34235 IPR013785 Aldolase-type TIM barrel RAM_34245 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal RAM_34245 IPR017853 Glycoside hydrolase superfamily RAM_34245 IPR025705 Beta-hexosaminidase RAM_34245 IPR015883 Glycoside hydrolase family 20, catalytic domain RAM_34245 IPR029018 Beta-hexosaminidase-like, domain 2 RAM_34275 IPR005225 Small GTP-binding protein domain RAM_34275 IPR035654 Elongation factor 4, domain IV RAM_34275 IPR000640 Elongation factor EFG, domain V-like RAM_34275 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_34275 IPR013842 GTP-binding protein LepA, C-terminal RAM_34275 IPR000795 Transcription factor, GTP-binding domain RAM_34275 IPR031157 Tr-type G domain, conserved site RAM_34275 IPR038363 LepA, C-terminal domain superfamily RAM_34275 IPR035647 EF-G domain III/V-like RAM_34275 IPR006297 Elongation factor 4 RAM_34275 IPR009000 Translation protein, beta-barrel domain superfamily RAM_34280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_34280 IPR004033 UbiE/COQ5 methyltransferase RAM_34280 IPR023576 UbiE/COQ5 methyltransferase, conserved site RAM_34295 IPR036510 Ribosomal protein S20 superfamily RAM_34295 IPR002583 Ribosomal protein S20 RAM_34305 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_34305 IPR004450 Threonine synthase-like RAM_34305 IPR026260 Threonine synthase, bacterial/archaeal RAM_34305 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_34305 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RAM_34315 IPR004797 Competence protein ComEC/Rec2 RAM_34315 IPR004477 ComEC/Rec2-related protein RAM_34315 IPR035681 ComA-like, MBL domain RAM_34315 IPR025405 Domain of unknown function DUF4131 RAM_34315 IPR001279 Metallo-beta-lactamase RAM_34315 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_34325 IPR003797 DegV RAM_34335 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RAM_34335 IPR029033 Histidine phosphatase superfamily RAM_34335 IPR013078 Histidine phosphatase superfamily, clade-1 RAM_34340 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RAM_34345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_34345 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase RAM_34345 IPR004821 Cytidyltransferase-like domain RAM_34350 IPR018982 RQC domain RAM_34350 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial RAM_34350 IPR004589 DNA helicase, ATP-dependent, RecQ type RAM_34350 IPR011545 DEAD/DEAH box helicase domain RAM_34350 IPR010997 HRDC-like superfamily RAM_34350 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RAM_34350 IPR001650 Helicase, C-terminal RAM_34350 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_34350 IPR002121 HRDC domain RAM_34350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_34350 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_34355 IPR004736 MFS transporter, metabolite:H symporter RAM_34355 IPR020846 Major facilitator superfamily domain RAM_34355 IPR005828 Major facilitator, sugar transporter-like RAM_34355 IPR005829 Sugar transporter, conserved site RAM_34355 IPR036259 MFS transporter superfamily RAM_34360 IPR008909 DALR anticodon binding RAM_34360 IPR035684 Arginyl-tRNA synthetase, catalytic core domain RAM_34360 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RAM_34360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_34360 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily RAM_34360 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RAM_34360 IPR001278 Arginine-tRNA ligase RAM_34360 IPR005148 Arginyl tRNA synthetase N-terminal domain RAM_34375 IPR009057 Homeobox-like domain superfamily RAM_34375 IPR001647 DNA-binding HTH domain, TetR-type RAM_34375 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_34375 IPR011075 Tetracyclin repressor-like, C-terminal domain RAM_34375 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_34380 IPR036291 NAD(P)-binding domain superfamily RAM_34380 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_34385 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase RAM_34385 IPR019797 Glutamate 5-kinase, conserved site RAM_34385 IPR002478 PUA domain RAM_34385 IPR011529 Glutamate 5-kinase RAM_34385 IPR001057 Glutamate/acetylglutamate kinase RAM_34385 IPR036393 Acetylglutamate kinase-like superfamily RAM_34385 IPR036974 PUA domain superfamily RAM_34385 IPR001048 Aspartate/glutamate/uridylate kinase RAM_34385 IPR015947 PUA-like superfamily RAM_34390 IPR006074 GTP1/OBG, conserved site RAM_34390 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily RAM_34390 IPR006169 GTP1/OBG domain RAM_34390 IPR036726 GTP1/OBG domain superfamily RAM_34390 IPR006073 GTP binding domain RAM_34390 IPR015349 GTP-binding protein OBG, C-terminal RAM_34390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_34390 IPR014100 GTP-binding protein Obg/CgtA RAM_34390 IPR031167 OBG-type guanine nucleotide-binding (G) domain RAM_34395 IPR001684 Ribosomal protein L27 RAM_34395 IPR018261 Ribosomal protein L27, conserved site RAM_34400 IPR036164 L21-like superfamily RAM_34400 IPR018258 Ribosomal protein L21, conserved site RAM_34400 IPR028909 Ribosomal protein L21-like RAM_34400 IPR001787 Ribosomal protein L21 RAM_34405 IPR004659 Ribonuclease E/G RAM_34405 IPR022967 RNA-binding domain, S1 RAM_34405 IPR003029 S1 domain RAM_34405 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RAM_34405 IPR003029 S1 domain RAM_34405 IPR022967 RNA-binding domain, S1 RAM_34405 IPR004659 Ribonuclease E/G RAM_34405 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G RAM_34405 IPR012340 Nucleic acid-binding, OB-fold RAM_34405 IPR012340 Nucleic acid-binding, OB-fold RAM_34410 IPR034063 Fervidolysin domain RAM_34410 IPR013783 Immunoglobulin-like fold RAM_34410 IPR000209 Peptidase S8/S53 domain RAM_34410 IPR036852 Peptidase S8/S53 domain superfamily RAM_34410 IPR023827 Peptidase S8, subtilisin, Asp-active site RAM_34410 IPR022398 Peptidase S8, subtilisin, His-active site RAM_34410 IPR023828 Peptidase S8, subtilisin, Ser-active site RAM_34410 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily RAM_34410 IPR015500 Peptidase S8, subtilisin-related RAM_34415 IPR013525 ABC-2 type transporter RAM_34415 IPR005981 ABC-2 type transporter, NodJ RAM_34415 IPR000412 ABC-2 transporter RAM_34425 IPR015851 ABC transporter, NodI RAM_34425 IPR005978 Nodulation ABC transporter, NodI RAM_34425 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_34425 IPR003439 ABC transporter-like RAM_34425 IPR003593 AAA+ ATPase domain RAM_34425 IPR017871 ABC transporter, conserved site RAM_34440 IPR034907 Nucleoside diphosphate kinase-like domain RAM_34440 IPR036850 Nucleoside diphosphate kinase-like domain superfamily RAM_34440 IPR001564 Nucleoside diphosphate kinase RAM_34450 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_34450 IPR023343 Penicillin amidase type, domain 1 RAM_34450 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase RAM_34460 IPR004101 Mur ligase, C-terminal RAM_34460 IPR036565 Mur-like, catalytic domain superfamily RAM_34460 IPR036615 Mur ligase, C-terminal domain superfamily RAM_34460 IPR001645 Folylpolyglutamate synthetase RAM_34460 IPR013221 Mur ligase, central RAM_34460 IPR018109 Folylpolyglutamate synthetase, conserved site RAM_34465 IPR013216 Methyltransferase type 11 RAM_34465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_34470 IPR037460 Streptomyces scabies esterase-like RAM_34470 IPR013830 SGNH hydrolase-type esterase domain RAM_34470 IPR036514 SGNH hydrolase superfamily RAM_34480 IPR000073 Alpha/beta hydrolase fold-1 RAM_34480 IPR029058 Alpha/Beta hydrolase fold RAM_34480 IPR000639 Epoxide hydrolase-like RAM_34485 IPR036390 Winged helix DNA-binding domain superfamily RAM_34485 IPR005119 LysR, substrate-binding RAM_34485 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_34485 IPR000847 Transcription regulator HTH, LysR RAM_34490 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RAM_34490 IPR002303 Valine-tRNA ligase RAM_34490 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RAM_34490 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RAM_34490 IPR002300 Aminoacyl-tRNA synthetase, class Ia RAM_34490 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm RAM_34490 IPR033705 Valyl tRNA synthetase, anticodon-binding domain RAM_34490 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_34490 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RAM_34490 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RAM_34490 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily RAM_34500 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_34500 IPR000835 MarR-type HTH domain RAM_34500 IPR036390 Winged helix DNA-binding domain superfamily RAM_34505 IPR011701 Major facilitator superfamily RAM_34505 IPR036259 MFS transporter superfamily RAM_34505 IPR020846 Major facilitator superfamily domain RAM_34510 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_34510 IPR037951 YdeP-like, MopB domain RAM_34510 IPR010046 Oxidoreductase alpha (molybdopterin) subunit RAM_34510 IPR006656 Molybdopterin oxidoreductase RAM_34510 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain RAM_34510 IPR006657 Molybdopterin dinucleotide-binding domain RAM_34520 IPR004474 Cell envelope-related transcriptional attenuator domain RAM_34520 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain RAM_34540 IPR016193 Cytidine deaminase-like RAM_34540 IPR003786 Sulfur carrier protein FdhD RAM_34545 IPR004294 Carotenoid oxygenase RAM_34570 IPR004487 Clp protease, ATP-binding subunit ClpX RAM_34570 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_34570 IPR010603 Zinc finger, ClpX C4-type RAM_34570 IPR003959 ATPase, AAA-type, core RAM_34570 IPR003593 AAA+ ATPase domain RAM_34570 IPR038366 Zinc finger, ClpX C4-type superfamily RAM_34570 IPR019489 Clp ATPase, C-terminal RAM_34575 IPR033135 ClpP, histidine active site RAM_34575 IPR001907 ATP-dependent Clp protease proteolytic subunit RAM_34575 IPR029045 ClpP/crotonase-like domain superfamily RAM_34575 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RAM_34575 IPR018215 ClpP, Ser active site RAM_34580 IPR029045 ClpP/crotonase-like domain superfamily RAM_34580 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RAM_34580 IPR033135 ClpP, histidine active site RAM_34580 IPR001907 ATP-dependent Clp protease proteolytic subunit RAM_34585 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RAM_34585 IPR005215 Trigger factor RAM_34585 IPR037041 Trigger factor, C-terminal domain superfamily RAM_34585 IPR008881 Trigger factor, ribosome-binding, bacterial RAM_34585 IPR036611 Trigger factor ribosome-binding domain superfamily RAM_34585 IPR027304 Trigger factor/SurA domain superfamily RAM_34585 IPR008880 Trigger factor, C-terminal RAM_34595 IPR017938 Riboflavin synthase-like beta-barrel RAM_34595 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_34595 IPR001433 Oxidoreductase FAD/NAD(P)-binding RAM_34595 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_34595 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RAM_34595 IPR012675 Beta-grasp domain superfamily RAM_34595 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_34595 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_34595 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_34595 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RAM_34595 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit RAM_34605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_34605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_34605 IPR005467 Histidine kinase domain RAM_34605 IPR003594 Histidine kinase/HSP90-like ATPase RAM_34605 IPR003660 HAMP domain RAM_34605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_34605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_34610 IPR038731 Glycosyltransferase RgtA/B/C/D-like RAM_34625 IPR006283 Thiamine-monophosphate kinase RAM_34625 IPR036921 PurM-like, N-terminal domain superfamily RAM_34625 IPR036676 PurM-like, C-terminal domain superfamily RAM_34625 IPR010918 PurM-like, C-terminal domain RAM_34625 IPR016188 PurM-like, N-terminal domain RAM_34630 IPR036157 dUTPase-like superfamily RAM_34630 IPR029054 dUTPase-like RAM_34630 IPR011962 dCTP deaminase RAM_34630 IPR033704 dUTPase, trimeric RAM_34670 IPR038731 Glycosyltransferase RgtA/B/C/D-like RAM_34710 IPR019734 Tetratricopeptide repeat RAM_34710 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_34710 IPR013026 Tetratricopeptide repeat-containing domain RAM_34710 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_34710 IPR016032 Signal transduction response regulator, C-terminal effector RAM_34710 IPR005158 Bacterial transcriptional activator domain RAM_34710 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_34710 IPR002182 NB-ARC RAM_34710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_34720 IPR005887 Alpha-1,2-mannosidase, putative RAM_34720 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_34720 IPR041371 Glycosyl hydrolase family 92 N-terminal domain RAM_34720 IPR012939 Glycosyl hydrolase family 92 RAM_34720 IPR008928 Six-hairpin glycosidase superfamily RAM_34725 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_34725 IPR006679 Adenine deaminase RAM_34725 IPR026912 Adenine deaminase C-terminal domain RAM_34725 IPR032466 Metal-dependent hydrolase RAM_34725 IPR006680 Amidohydrolase-related RAM_34735 IPR003593 AAA+ ATPase domain RAM_34735 IPR003439 ABC transporter-like RAM_34735 IPR017871 ABC transporter, conserved site RAM_34735 IPR025302 Domain of unknown function DUF4162 RAM_34735 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_34740 IPR009057 Homeobox-like domain superfamily RAM_34740 IPR001647 DNA-binding HTH domain, TetR-type RAM_34740 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_34740 IPR041484 TetR transcriptional regulator Rv1219c-like, C-terminal domain RAM_34750 IPR000600 ROK family RAM_34750 IPR004654 Glucokinase ROK RAM_34755 IPR013453 Xylose isomerase, actinobacteria RAM_34755 IPR013022 Xylose isomerase-like, TIM barrel domain RAM_34755 IPR001998 Xylose isomerase RAM_34755 IPR036237 Xylose isomerase-like superfamily RAM_34770 IPR020846 Major facilitator superfamily domain RAM_34770 IPR036259 MFS transporter superfamily RAM_34770 IPR011701 Major facilitator superfamily RAM_34775 IPR020471 Aldo/keto reductase RAM_34775 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_34775 IPR023210 NADP-dependent oxidoreductase domain RAM_34775 IPR018170 Aldo/keto reductase, conserved site RAM_34810 IPR002818 DJ-1/PfpI RAM_34810 IPR006286 Deglycase PfpI RAM_34810 IPR029062 Class I glutamine amidotransferase-like RAM_34815 IPR017944 KaiA/RbsU helical domain superfamily RAM_34815 IPR036457 PPM-type phosphatase domain superfamily RAM_34815 IPR001932 PPM-type phosphatase domain RAM_34815 IPR014787 Phosphoserine phosphatase RsbU, N-terminal RAM_34820 IPR029151 Periplasmic sensor-like domain superfamily RAM_34820 IPR015387 LuxQ, periplasmic RAM_34820 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_34820 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_34820 IPR005467 Histidine kinase domain RAM_34820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_34820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_34820 IPR003594 Histidine kinase/HSP90-like ATPase RAM_34820 IPR011006 CheY-like superfamily RAM_34820 IPR001789 Signal transduction response regulator, receiver domain RAM_34835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_34835 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase RAM_34875 IPR005119 LysR, substrate-binding RAM_34875 IPR000847 Transcription regulator HTH, LysR RAM_34875 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_34875 IPR036390 Winged helix DNA-binding domain superfamily RAM_34885 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_34885 IPR036291 NAD(P)-binding domain superfamily RAM_34895 IPR036661 Luciferase-like domain superfamily RAM_34895 IPR011251 Luciferase-like domain RAM_34910 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_34910 IPR036390 Winged helix DNA-binding domain superfamily RAM_34910 IPR002577 Helix-turn-helix, HxlR type RAM_34915 IPR013785 Aldolase-type TIM barrel RAM_34915 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain RAM_34915 IPR013780 Glycosyl hydrolase, all-beta RAM_34915 IPR017853 Glycoside hydrolase superfamily RAM_34915 IPR002241 Glycoside hydrolase, family 27 RAM_34915 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_34920 IPR037401 SnoaL-like domain RAM_34920 IPR032710 NTF2-like domain superfamily RAM_34925 IPR011251 Luciferase-like domain RAM_34925 IPR036661 Luciferase-like domain superfamily RAM_34925 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted RAM_34940 IPR027413 GroEL-like equatorial domain superfamily RAM_34940 IPR027410 TCP-1-like chaperonin intermediate domain superfamily RAM_34940 IPR027409 GroEL-like apical domain superfamily RAM_34940 IPR018370 Chaperonin Cpn60, conserved site RAM_34940 IPR002423 Chaperonin Cpn60/TCP-1 family RAM_34940 IPR001844 Chaperonin Cpn60 RAM_34945 IPR010979 Ribosomal protein S13-like, H2TH RAM_34945 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RAM_34945 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site RAM_34945 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain RAM_34945 IPR035937 MutM-like, N-terminal RAM_34945 IPR010663 Zinc finger, FPG/IleRS-type RAM_34945 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type RAM_34950 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily RAM_34950 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family RAM_34950 IPR011860 Ribose 5-phosphate isomerase B, Actinobacteria-type RAM_34970 IPR036249 Thioredoxin-like superfamily RAM_34970 IPR001853 DSBA-like thioredoxin domain RAM_34975 IPR014782 Peptidase M1, membrane alanine aminopeptidase RAM_34975 IPR042097 Aminopeptidase N-like , N-terminal RAM_34975 IPR024571 ERAP1-like C-terminal domain RAM_34975 IPR012778 Peptidase M1, aminopeptidase RAM_34975 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase RAM_34985 IPR033437 Protein of unknown function DUF5130 RAM_35005 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RAM_35005 IPR011066 Mechanosensitive ion channel MscS, C-terminal RAM_35005 IPR006685 Mechanosensitive ion channel MscS RAM_35005 IPR010920 LSM domain superfamily RAM_35005 IPR023408 Mechanosensitive ion channel MscS domain superfamily RAM_35010 IPR019795 Globin, bacterial-like, conserved site RAM_35010 IPR012292 Globin/Protoglobin RAM_35010 IPR009050 Globin-like superfamily RAM_35010 IPR001486 Truncated hemoglobin RAM_35015 IPR013780 Glycosyl hydrolase, all-beta RAM_35015 IPR017853 Glycoside hydrolase superfamily RAM_35015 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RAM_35035 IPR007780 NAD-glutamate dehydrogenase, bacteria RAM_35035 IPR036291 NAD(P)-binding domain superfamily RAM_35035 IPR028971 NAD-glutamate dehydrogenase RAM_35045 IPR003593 AAA+ ATPase domain RAM_35045 IPR017871 ABC transporter, conserved site RAM_35045 IPR003439 ABC transporter-like RAM_35045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_35045 IPR032781 ABC-transporter extension domain RAM_35045 IPR022374 Energy-dependent translational throttle protein EttA RAM_35050 IPR008457 Copper resistance protein D RAM_35050 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related RAM_35065 IPR011701 Major facilitator superfamily RAM_35065 IPR036259 MFS transporter superfamily RAM_35065 IPR020846 Major facilitator superfamily domain RAM_35080 IPR015424 Pyridoxal phosphate-dependent transferase RAM_35080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_35080 IPR005814 Aminotransferase class-III RAM_35080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_35085 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_35085 IPR012132 Glucose-methanol-choline oxidoreductase RAM_35085 IPR027424 Glucose Oxidase, domain 2 RAM_35085 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RAM_35085 IPR011533 Oxygen-dependent choline dehydrogenase RAM_35085 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RAM_35105 IPR012132 Glucose-methanol-choline oxidoreductase RAM_35105 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_35105 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RAM_35105 IPR011533 Oxygen-dependent choline dehydrogenase RAM_35105 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RAM_35105 IPR027424 Glucose Oxidase, domain 2 RAM_35120 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RAM_35120 IPR013766 Thioredoxin domain RAM_35120 IPR036249 Thioredoxin-like superfamily RAM_35120 IPR024706 Peroxiredoxin, AhpC-type RAM_35140 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_35140 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_35140 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_35140 IPR015590 Aldehyde dehydrogenase domain RAM_35140 IPR016161 Aldehyde/histidinol dehydrogenase RAM_35145 IPR036259 MFS transporter superfamily RAM_35145 IPR004638 Drug resistance transporter EmrB-like RAM_35145 IPR011701 Major facilitator superfamily RAM_35145 IPR020846 Major facilitator superfamily domain RAM_35150 IPR029058 Alpha/Beta hydrolase fold RAM_35150 IPR000639 Epoxide hydrolase-like RAM_35150 IPR016292 Epoxide hydrolase RAM_35150 IPR010497 Epoxide hydrolase, N-terminal RAM_35150 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_35170 IPR002938 FAD-binding domain RAM_35170 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase RAM_35170 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_35195 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RAM_35195 IPR029045 ClpP/crotonase-like domain superfamily RAM_35195 IPR034733 Acetyl-CoA carboxylase RAM_35195 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RAM_35195 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RAM_35205 IPR005886 UDP-glucose 4-epimerase RAM_35205 IPR036291 NAD(P)-binding domain superfamily RAM_35205 IPR016040 NAD(P)-binding domain RAM_35210 IPR012349 FMN-binding split barrel RAM_35210 IPR002563 Flavin reductase like domain RAM_35220 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_35220 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_35220 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_35220 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_35220 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_35220 IPR009081 Phosphopantetheine binding ACP domain RAM_35220 IPR018201 Beta-ketoacyl synthase, active site RAM_35220 IPR013968 Polyketide synthase, ketoreductase domain RAM_35220 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_35220 IPR036736 ACP-like superfamily RAM_35220 IPR036291 NAD(P)-binding domain superfamily RAM_35220 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_35220 IPR016039 Thiolase-like RAM_35220 IPR014043 Acyl transferase RAM_35225 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain RAM_35225 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_35225 IPR017518 Conserved hypothetical protein CHP03084 RAM_35225 IPR013917 tRNA wybutosine-synthesis RAM_35225 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type RAM_35235 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RAM_35235 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_35245 IPR002401 Cytochrome P450, E-class, group I RAM_35245 IPR017972 Cytochrome P450, conserved site RAM_35245 IPR001128 Cytochrome P450 RAM_35245 IPR036396 Cytochrome P450 superfamily RAM_35270 IPR020449 Transcription regulator HTH, AraC- type RAM_35270 IPR029062 Class I glutamine amidotransferase-like RAM_35270 IPR009057 Homeobox-like domain superfamily RAM_35270 IPR018060 DNA binding HTH domain, AraC-type RAM_35270 IPR018062 HTH domain AraC-type, conserved site RAM_35280 IPR002577 Helix-turn-helix, HxlR type RAM_35280 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35280 IPR036390 Winged helix DNA-binding domain superfamily RAM_35285 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_35285 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_35285 IPR013325 RNA polymerase sigma factor, region 2 RAM_35285 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_35285 IPR007627 RNA polymerase sigma-70 region 2 RAM_35285 IPR014284 RNA polymerase sigma-70 like domain RAM_35285 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35290 IPR011008 Dimeric alpha-beta barrel RAM_35290 IPR005545 YCII-related RAM_35300 IPR006070 YrdC-like domain RAM_35300 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RAM_35315 IPR000792 Transcription regulator LuxR, C-terminal RAM_35315 IPR016032 Signal transduction response regulator, C-terminal effector RAM_35315 IPR011006 CheY-like superfamily RAM_35315 IPR001789 Signal transduction response regulator, receiver domain RAM_35325 IPR003313 AraC-type arabinose-binding/dimerisation domain RAM_35325 IPR009057 Homeobox-like domain superfamily RAM_35325 IPR018062 HTH domain AraC-type, conserved site RAM_35325 IPR037923 Transcription regulator HTH-like RAM_35325 IPR018060 DNA binding HTH domain, AraC-type RAM_35325 IPR020449 Transcription regulator HTH, AraC- type RAM_35325 IPR014710 RmlC-like jelly roll fold RAM_35330 IPR001789 Signal transduction response regulator, receiver domain RAM_35330 IPR011006 CheY-like superfamily RAM_35330 IPR000792 Transcription regulator LuxR, C-terminal RAM_35330 IPR016032 Signal transduction response regulator, C-terminal effector RAM_35330 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35335 IPR003594 Histidine kinase/HSP90-like ATPase RAM_35335 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_35335 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_35350 IPR002577 Helix-turn-helix, HxlR type RAM_35350 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35350 IPR036390 Winged helix DNA-binding domain superfamily RAM_35350 IPR011991 ArsR-like helix-turn-helix domain RAM_35380 IPR003735 Metal-sensitive transcriptional repressor RAM_35380 IPR038390 Metal-sensitive transcriptional repressor superfamily RAM_35385 IPR023299 P-type ATPase, cytoplasmic domain N RAM_35385 IPR001757 P-type ATPase RAM_35385 IPR027256 P-type ATPase, subfamily IB RAM_35385 IPR036163 Heavy metal-associated domain superfamily RAM_35385 IPR006121 Heavy metal-associated domain, HMA RAM_35385 IPR017969 Heavy-metal-associated, conserved site RAM_35385 IPR023214 HAD superfamily RAM_35385 IPR036412 HAD-like superfamily RAM_35385 IPR000579 Cation-transporting P-type ATPase A/B RAM_35385 IPR008250 P-type ATPase, A domain superfamily RAM_35385 IPR023298 P-type ATPase, transmembrane domain superfamily RAM_35385 IPR018303 P-type ATPase, phosphorylation site RAM_35395 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase RAM_35395 IPR000878 Tetrapyrrole methylase RAM_35395 IPR035996 Tetrapyrrole methylase superfamily RAM_35395 IPR014776 Tetrapyrrole methylase, subdomain 2 RAM_35395 IPR014777 Tetrapyrrole methylase, subdomain 1 RAM_35400 IPR029058 Alpha/Beta hydrolase fold RAM_35400 IPR000073 Alpha/beta hydrolase fold-1 RAM_35400 IPR000639 Epoxide hydrolase-like RAM_35405 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_35405 IPR036291 NAD(P)-binding domain superfamily RAM_35405 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_35420 IPR034405 F420, menaquinone cofactor biosynthesis RAM_35420 IPR020050 FO synthase, subunit 2 RAM_35420 IPR013785 Aldolase-type TIM barrel RAM_35420 IPR006638 Elp3/MiaB/NifB RAM_35420 IPR007197 Radical SAM RAM_35420 IPR019939 CofG family RAM_35420 IPR019940 CofH family RAM_35445 IPR013094 Alpha/beta hydrolase fold-3 RAM_35445 IPR029058 Alpha/Beta hydrolase fold RAM_35465 IPR001789 Signal transduction response regulator, receiver domain RAM_35465 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35465 IPR011006 CheY-like superfamily RAM_35465 IPR039420 Transcriptional regulatory protein WalR-like RAM_35465 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_35470 IPR003660 HAMP domain RAM_35470 IPR003594 Histidine kinase/HSP90-like ATPase RAM_35470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_35470 IPR005467 Histidine kinase domain RAM_35470 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_35470 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_35470 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_35485 IPR028082 Periplasmic binding protein-like I RAM_35485 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_35485 IPR000843 LacI-type HTH domain RAM_35490 IPR006059 Bacterial extracellular solute-binding protein RAM_35495 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_35495 IPR035906 MetI-like superfamily RAM_35500 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_35500 IPR035906 MetI-like superfamily RAM_35500 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE RAM_35510 IPR005158 Bacterial transcriptional activator domain RAM_35510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_35510 IPR002182 NB-ARC RAM_35510 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35510 IPR019734 Tetratricopeptide repeat RAM_35510 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_35510 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_35510 IPR016032 Signal transduction response regulator, C-terminal effector RAM_35520 IPR006426 Asparagine synthase, glutamine-hydrolyzing RAM_35520 IPR001962 Asparagine synthase RAM_35520 IPR033738 Asparagine synthase, N-terminal domain RAM_35520 IPR017932 Glutamine amidotransferase type 2 domain RAM_35520 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_35530 IPR000600 ROK family RAM_35530 IPR004654 Glucokinase ROK RAM_35550 IPR000847 Transcription regulator HTH, LysR RAM_35550 IPR005119 LysR, substrate-binding RAM_35550 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain RAM_35550 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35550 IPR036390 Winged helix DNA-binding domain superfamily RAM_35560 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_35560 IPR036291 NAD(P)-binding domain superfamily RAM_35560 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_35575 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RAM_35575 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RAM_35575 IPR023753 FAD/NAD(P)-binding domain RAM_35575 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_35575 IPR006258 Dihydrolipoamide dehydrogenase RAM_35575 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_35575 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RAM_35590 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_35590 IPR028082 Periplasmic binding protein-like I RAM_35590 IPR000843 LacI-type HTH domain RAM_35610 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_35610 IPR011006 CheY-like superfamily RAM_35610 IPR039420 Transcriptional regulatory protein WalR-like RAM_35610 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35610 IPR001789 Signal transduction response regulator, receiver domain RAM_35615 IPR005467 Histidine kinase domain RAM_35615 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_35615 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_35615 IPR003660 HAMP domain RAM_35615 IPR003594 Histidine kinase/HSP90-like ATPase RAM_35615 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_35615 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_35625 IPR004758 Amino acid transporter RAM_35625 IPR002293 Amino acid/polyamine transporter I RAM_35630 IPR001110 Uncharacterised protein family UPF0012, conserved site RAM_35630 IPR036526 Carbon-nitrogen hydrolase superfamily RAM_35630 IPR003010 Carbon-nitrogen hydrolase RAM_35635 IPR002937 Amine oxidase RAM_35635 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_35650 IPR000073 Alpha/beta hydrolase fold-1 RAM_35650 IPR029058 Alpha/Beta hydrolase fold RAM_35660 IPR041522 CdaR, GGDEF-like domain RAM_35660 IPR025736 PucR C-terminal helix-turn-helix domain RAM_35660 IPR008599 Putative sugar diacid recognition RAM_35660 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_35680 IPR002155 Thiolase RAM_35680 IPR012793 Beta-ketoadipyl CoA thiolase RAM_35680 IPR020616 Thiolase, N-terminal RAM_35680 IPR020617 Thiolase, C-terminal RAM_35680 IPR020610 Thiolase, active site RAM_35680 IPR020615 Thiolase, acyl-enzyme intermediate active site RAM_35680 IPR020613 Thiolase, conserved site RAM_35680 IPR016039 Thiolase-like RAM_35685 IPR020845 AMP-binding, conserved site RAM_35685 IPR025110 AMP-binding enzyme, C-terminal domain RAM_35685 IPR011963 2,3-dihydroxybenzoate-AMP ligase RAM_35685 IPR000873 AMP-dependent synthetase/ligase RAM_35690 IPR004294 Carotenoid oxygenase RAM_35695 IPR036390 Winged helix DNA-binding domain superfamily RAM_35695 IPR002577 Helix-turn-helix, HxlR type RAM_35695 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35695 IPR011991 ArsR-like helix-turn-helix domain RAM_35705 IPR022877 Protein of unknown funcion UPF0173 RAM_35705 IPR001279 Metallo-beta-lactamase RAM_35705 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_35710 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35710 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain RAM_35710 IPR036390 Winged helix DNA-binding domain superfamily RAM_35710 IPR005119 LysR, substrate-binding RAM_35710 IPR000847 Transcription regulator HTH, LysR RAM_35715 IPR012338 Beta-lactamase/transpeptidase-like RAM_35720 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RAM_35720 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RAM_35720 IPR033524 Leu/Phe/Val dehydrogenases active site RAM_35720 IPR036291 NAD(P)-binding domain superfamily RAM_35720 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RAM_35720 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal RAM_35730 IPR004981 Tryptophan 2,3-dioxygenase RAM_35730 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like RAM_35740 IPR024087 Creatininase-like superfamily RAM_35740 IPR003785 Creatininase/formamide hydrolase RAM_35740 IPR031034 Creatinine amidohydrolase RAM_35745 IPR011957 Benzoate-CoA ligase family RAM_35745 IPR025110 AMP-binding enzyme, C-terminal domain RAM_35745 IPR000873 AMP-dependent synthetase/ligase RAM_35750 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_35750 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_35750 IPR011283 Acetoacetyl-CoA reductase RAM_35750 IPR036291 NAD(P)-binding domain superfamily RAM_35755 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RAM_35755 IPR029045 ClpP/crotonase-like domain superfamily RAM_35755 IPR001753 Enoyl-CoA hydratase/isomerase RAM_35755 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_35795 IPR036291 NAD(P)-binding domain superfamily RAM_35795 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_35795 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_35805 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_35805 IPR016032 Signal transduction response regulator, C-terminal effector RAM_35805 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_35805 IPR000792 Transcription regulator LuxR, C-terminal RAM_35805 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35815 IPR010192 2-succinylbenzoate--CoA ligase RAM_35815 IPR042099 AMP-dependent synthetase-like superfamily RAM_35815 IPR000873 AMP-dependent synthetase/ligase RAM_35815 IPR020845 AMP-binding, conserved site RAM_35815 IPR025110 AMP-binding enzyme, C-terminal domain RAM_35830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_35830 IPR024590 RNA helicase HrpA, C-terminal RAM_35830 IPR007502 Helicase-associated domain RAM_35830 IPR010222 RNA helicase HrpA RAM_35830 IPR011709 Domain of unknown function DUF1605 RAM_35830 IPR011545 DEAD/DEAH box helicase domain RAM_35830 IPR003593 AAA+ ATPase domain RAM_35830 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_35830 IPR001650 Helicase, C-terminal RAM_35840 IPR037350 Lactate 2-monooxygenase, FMN-binding domain RAM_35840 IPR000262 FMN-dependent dehydrogenase RAM_35840 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site RAM_35840 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent RAM_35840 IPR013785 Aldolase-type TIM barrel RAM_35840 IPR037396 FMN hydroxy acid dehydrogenase domain RAM_35845 IPR036291 NAD(P)-binding domain superfamily RAM_35845 IPR005097 Saccharopine dehydrogenase, NADP binding domain RAM_35850 IPR020946 Flavin monooxygenase-like RAM_35850 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_35860 IPR023099 Glycoside hydrolase, family 46, N-terminal RAM_35860 IPR023346 Lysozyme-like domain superfamily RAM_35860 IPR000400 Glycoside hydrolase, family 46 RAM_35865 IPR029398 DNA polymerase beta, thumb domain RAM_35865 IPR003141 Polymerase/histidinol phosphatase, N-terminal RAM_35865 IPR010996 DNA polymerase beta-like, N-terminal domain RAM_35865 IPR027421 DNA polymerase lambda lyase domain superfamily RAM_35865 IPR037160 DNA polymerase, thumb domain superfamily RAM_35865 IPR016195 Polymerase/histidinol phosphatase-like RAM_35865 IPR002054 DNA-directed DNA polymerase X RAM_35865 IPR022311 Uncharacterised conserved protein UCP005047, YshC RAM_35865 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RAM_35865 IPR004013 PHP domain RAM_35875 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_35875 IPR000524 Transcription regulator HTH, GntR RAM_35875 IPR000485 AsnC-type HTH domain RAM_35875 IPR036390 Winged helix DNA-binding domain superfamily RAM_35875 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35875 IPR011711 GntR, C-terminal RAM_35880 IPR042096 Dihydroxy-acid dehydratase, C-terminal RAM_35880 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RAM_35880 IPR037237 IlvD/EDD, N-terminal domain RAM_35880 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RAM_35900 IPR000160 GGDEF domain RAM_35900 IPR039435 Diguanylate cyclase DosC, globin sensor domain RAM_35900 IPR012292 Globin/Protoglobin RAM_35900 IPR029787 Nucleotide cyclase RAM_35900 IPR009050 Globin-like superfamily RAM_35910 IPR006316 Tryptophan synthase, beta chain-like RAM_35910 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_35910 IPR006654 Tryptophan synthase, beta chain RAM_35910 IPR023026 Tryptophan synthase beta chain/beta chain-like RAM_35910 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_35910 IPR006653 Tryptophan synthase, beta chain, conserved site RAM_35915 IPR002925 Dienelactone hydrolase RAM_35915 IPR029058 Alpha/Beta hydrolase fold RAM_35930 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_35930 IPR014284 RNA polymerase sigma-70 like domain RAM_35930 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35930 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_35930 IPR013325 RNA polymerase sigma factor, region 2 RAM_35930 IPR007627 RNA polymerase sigma-70 region 2 RAM_35930 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_35950 IPR006196 RNA-binding domain, S1, IF1 type RAM_35950 IPR022967 RNA-binding domain, S1 RAM_35950 IPR004368 Translation initiation factor IF-1 RAM_35950 IPR012340 Nucleic acid-binding, OB-fold RAM_35965 IPR015424 Pyridoxal phosphate-dependent transferase RAM_35965 IPR036390 Winged helix DNA-binding domain superfamily RAM_35965 IPR004839 Aminotransferase, class I/classII RAM_35965 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_35965 IPR000524 Transcription regulator HTH, GntR RAM_35965 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_35965 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_35975 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain RAM_35975 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type RAM_35975 IPR035937 MutM-like, N-terminal RAM_35975 IPR010663 Zinc finger, FPG/IleRS-type RAM_35975 IPR010979 Ribosomal protein S13-like, H2TH RAM_35975 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RAM_35975 IPR020629 Formamidopyrimidine-DNA glycosylase RAM_35980 IPR007061 Protein of unknown function DUF664 RAM_35980 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_35985 IPR017810 Mycothiol biosynthesis protein, MshB RAM_35985 IPR024078 Putative deacetylase LmbE-like domain superfamily RAM_35985 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RAM_35995 IPR037171 NagB/RpiA transferase-like RAM_35995 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal RAM_35995 IPR011559 Initiation factor 2B alpha/beta/delta RAM_35995 IPR005251 Methylthioribose-1-phosphate isomerase RAM_35995 IPR000649 Initiation factor 2B-related RAM_35995 IPR036409 Class II aldolase/adducin N-terminal domain superfamily RAM_35995 IPR001303 Class II aldolase/adducin N-terminal RAM_35995 IPR017714 Methylthioribulose-1-phosphate dehydratase RAM_36010 IPR036396 Cytochrome P450 superfamily RAM_36010 IPR017972 Cytochrome P450, conserved site RAM_36010 IPR001128 Cytochrome P450 RAM_36010 IPR002397 Cytochrome P450, B-class RAM_36015 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_36015 IPR005149 Transcription regulator PadR, N-terminal RAM_36015 IPR018309 Transcription regulator PadR, C-terminal RAM_36015 IPR036390 Winged helix DNA-binding domain superfamily RAM_36020 IPR036396 Cytochrome P450 superfamily RAM_36020 IPR001128 Cytochrome P450 RAM_36020 IPR002397 Cytochrome P450, B-class RAM_36020 IPR017972 Cytochrome P450, conserved site RAM_36025 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_36025 IPR029061 Thiamin diphosphate-binding fold RAM_36025 IPR005474 Transketolase, N-terminal RAM_36030 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_36030 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal RAM_36030 IPR001647 DNA-binding HTH domain, TetR-type RAM_36030 IPR009057 Homeobox-like domain superfamily RAM_36035 IPR006094 FAD linked oxidase, N-terminal RAM_36035 IPR016164 FAD-linked oxidase-like, C-terminal RAM_36035 IPR004113 FAD-linked oxidase, C-terminal RAM_36035 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_36035 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_36035 IPR009051 Alpha-helical ferredoxin RAM_36035 IPR036318 FAD-binding, type PCMH-like superfamily RAM_36035 IPR016166 FAD-binding domain, PCMH-type RAM_36045 IPR000792 Transcription regulator LuxR, C-terminal RAM_36045 IPR011006 CheY-like superfamily RAM_36045 IPR016032 Signal transduction response regulator, C-terminal effector RAM_36045 IPR001789 Signal transduction response regulator, receiver domain RAM_36045 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_36055 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_36055 IPR003593 AAA+ ATPase domain RAM_36055 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RAM_36055 IPR003439 ABC transporter-like RAM_36055 IPR017871 ABC transporter, conserved site RAM_36060 IPR003439 ABC transporter-like RAM_36060 IPR017871 ABC transporter, conserved site RAM_36060 IPR003593 AAA+ ATPase domain RAM_36060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_36060 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RAM_36065 IPR001851 ABC transporter, permease RAM_36070 IPR001851 ABC transporter, permease RAM_36085 IPR016181 Acyl-CoA N-acyltransferase RAM_36085 IPR000182 GNAT domain RAM_36090 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_36090 IPR005887 Alpha-1,2-mannosidase, putative RAM_36090 IPR012939 Glycosyl hydrolase family 92 RAM_36090 IPR008928 Six-hairpin glycosidase superfamily RAM_36090 IPR041371 Glycosyl hydrolase family 92 N-terminal domain RAM_36095 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_36095 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal RAM_36095 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RAM_36095 IPR035647 EF-G domain III/V-like RAM_36095 IPR023582 Impact family RAM_36095 IPR036956 Impact, N-terminal domain superfamily RAM_36095 IPR015796 Impact family, bacterial/archaeal RAM_36095 IPR001498 Impact, N-terminal RAM_36100 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily RAM_36100 IPR006982 Glutamate synthase, central-N RAM_36100 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_36100 IPR002489 Glutamate synthase, alpha subunit, C-terminal RAM_36100 IPR017932 Glutamine amidotransferase type 2 domain RAM_36100 IPR013785 Aldolase-type TIM barrel RAM_36100 IPR002932 Glutamate synthase domain RAM_36105 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 RAM_36105 IPR028261 Dihydroprymidine dehydrogenase domain II RAM_36105 IPR009051 Alpha-helical ferredoxin RAM_36105 IPR023753 FAD/NAD(P)-binding domain RAM_36105 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_36110 IPR036291 NAD(P)-binding domain superfamily RAM_36110 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase RAM_36115 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_36115 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_36115 IPR001647 DNA-binding HTH domain, TetR-type RAM_36115 IPR009057 Homeobox-like domain superfamily RAM_36120 IPR011008 Dimeric alpha-beta barrel RAM_36120 IPR006314 Dyp-type peroxidase RAM_36125 IPR000600 ROK family RAM_36125 IPR023945 N-acetylmannosamine kinase, bacterial RAM_36145 IPR029062 Class I glutamine amidotransferase-like RAM_36145 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RAM_36145 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 RAM_36145 IPR017929 CobB/CobQ glutamine amidotransferase RAM_36145 IPR011698 CobB/CobQ-like glutamine amidotransferase RAM_36145 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_36145 IPR004459 Cobyric acid synthase CobQ RAM_36150 IPR004485 Cobalamin biosynthesis CobD/CbiB RAM_36155 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase RAM_36155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_36160 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic RAM_36160 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily RAM_36160 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal RAM_36160 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like RAM_36165 IPR003805 Adenosylcobinamide-GDP ribazoletransferase RAM_36170 IPR013196 Helix-turn-helix, type 11 RAM_36170 IPR028349 Protein PafC RAM_36170 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_36170 IPR036390 Winged helix DNA-binding domain superfamily RAM_36170 IPR026881 WYL domain RAM_36170 IPR001034 DeoR-type HTH domain RAM_36180 IPR004839 Aminotransferase, class I/classII RAM_36180 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RAM_36180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_36180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_36180 IPR015424 Pyridoxal phosphate-dependent transferase RAM_36185 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA RAM_36185 IPR017929 CobB/CobQ glutamine amidotransferase RAM_36185 IPR029062 Class I glutamine amidotransferase-like RAM_36185 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RAM_36185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_36185 IPR011698 CobB/CobQ-like glutamine amidotransferase RAM_36195 IPR036465 von Willebrand factor A-like domain superfamily RAM_36195 IPR002035 von Willebrand factor, type A RAM_36195 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_36195 IPR041628 ChlI/MoxR, AAA lid domain RAM_36195 IPR041702 Magnesium-chelatase BchD/ChlD, VWA domain RAM_36195 IPR011704 ATPase, dynein-related, AAA domain RAM_36195 IPR003593 AAA+ ATPase domain RAM_36200 IPR035996 Tetrapyrrole methylase superfamily RAM_36200 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase RAM_36200 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase RAM_36200 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit RAM_36200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_36200 IPR000878 Tetrapyrrole methylase RAM_36200 IPR014777 Tetrapyrrole methylase, subdomain 1 RAM_36205 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RAM_36205 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase RAM_36205 IPR014776 Tetrapyrrole methylase, subdomain 2 RAM_36205 IPR014777 Tetrapyrrole methylase, subdomain 1 RAM_36205 IPR035996 Tetrapyrrole methylase superfamily RAM_36205 IPR000878 Tetrapyrrole methylase RAM_36210 IPR004104 Oxidoreductase, C-terminal RAM_36210 IPR000683 Oxidoreductase, N-terminal RAM_36210 IPR036291 NAD(P)-binding domain superfamily RAM_36215 IPR003723 Precorrin-6x reductase RAM_36220 IPR029479 Nitroreductase RAM_36220 IPR012825 5,6-dimethylbenzimidazole synthase BluB RAM_36220 IPR000415 Nitroreductase-like RAM_36225 IPR040920 Arabinosyltransferas, concanavalin like domain RAM_36225 IPR007680 Arabinofuranosyltransferase, central domain RAM_36225 IPR027451 Arabinofuranosyltransferase, domain 1 RAM_36225 IPR032731 Arabinosyltransferase, C-terminal RAM_36230 IPR014777 Tetrapyrrole methylase, subdomain 1 RAM_36230 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RAM_36230 IPR006364 Precorrin-2 C(20)-methyltransferase domain RAM_36230 IPR012382 Precorrin-2 C(20)-methyltransferase RAM_36230 IPR006363 Precorrin-3B C17-methyltransferase domain RAM_36230 IPR014776 Tetrapyrrole methylase, subdomain 2 RAM_36230 IPR035996 Tetrapyrrole methylase superfamily RAM_36230 IPR000878 Tetrapyrrole methylase RAM_36235 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily RAM_36235 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC RAM_36250 IPR005978 Nodulation ABC transporter, NodI RAM_36250 IPR015851 ABC transporter, NodI RAM_36250 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_36250 IPR017871 ABC transporter, conserved site RAM_36250 IPR003439 ABC transporter-like RAM_36250 IPR003593 AAA+ ATPase domain RAM_36260 IPR001387 Cro/C1-type helix-turn-helix domain RAM_36260 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_36270 IPR003672 CobN/magnesium chelatase RAM_36270 IPR011953 Cobaltochelatase, CobN subunit RAM_36275 IPR017853 Glycoside hydrolase superfamily RAM_36280 IPR016193 Cytidine deaminase-like RAM_36280 IPR002125 Cytidine and deoxycytidylate deaminase domain RAM_36280 IPR011549 Riboflavin-specific deaminase, C-terminal RAM_36280 IPR024072 Dihydrofolate reductase-like domain superfamily RAM_36280 IPR016192 APOBEC/CMP deaminase, zinc-binding RAM_36280 IPR004794 Riboflavin biosynthesis protein RibD RAM_36280 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal RAM_36295 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_36295 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site RAM_36295 IPR015590 Aldehyde dehydrogenase domain RAM_36295 IPR000965 GPR domain RAM_36295 IPR016161 Aldehyde/histidinol dehydrogenase RAM_36295 IPR012134 Glutamate-5-semialdehyde dehydrogenase RAM_36295 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_36320 IPR001940 Peptidase S1C RAM_36320 IPR001478 PDZ domain RAM_36320 IPR036034 PDZ superfamily RAM_36320 IPR011782 Peptidase S1C, Do RAM_36320 IPR009003 Peptidase S1, PA clan RAM_36330 IPR033186 Helicase HerA-like C-terminal RAM_36330 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_36335 IPR012337 Ribonuclease H-like superfamily RAM_36335 IPR036397 Ribonuclease H superfamily RAM_36335 IPR022894 Oligoribonuclease RAM_36335 IPR013520 Exonuclease, RNase T/DNA polymerase III RAM_36340 IPR020846 Major facilitator superfamily domain RAM_36340 IPR005828 Major facilitator, sugar transporter-like RAM_36340 IPR004736 MFS transporter, metabolite:H symporter RAM_36340 IPR015041 Osmosensory transporter coiled coil RAM_36340 IPR036259 MFS transporter superfamily RAM_36340 IPR005829 Sugar transporter, conserved site RAM_36340 IPR036292 Proline/betaine transporter ProP, C-terminal RAM_36345 IPR005490 L,D-transpeptidase catalytic domain RAM_36345 IPR038063 L,D-transpeptidase catalytic domain-like RAM_36345 IPR041280 Bacterial Ig domain, transpeptidase-associated RAM_36350 IPR011010 DNA breaking-rejoining enzyme, catalytic core RAM_36350 IPR013762 Integrase-like, catalytic domain superfamily RAM_36350 IPR002104 Integrase, catalytic domain RAM_36350 IPR010998 Integrase/recombinase, N-terminal RAM_36350 IPR004107 Integrase, SAM-like, N-terminal RAM_36350 IPR023009 Tyrosine recombinase XerC/XerD RAM_36360 IPR002941 DNA methylase N-4/N-6 RAM_36360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_36360 IPR001091 Restriction/modification DNA-methylase RAM_36360 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site RAM_36365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_36365 IPR001091 Restriction/modification DNA-methylase RAM_36365 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site RAM_36365 IPR002941 DNA methylase N-4/N-6 RAM_36440 IPR002938 FAD-binding domain RAM_36440 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_36525 IPR020476 NUDIX hydrolase RAM_36525 IPR000086 NUDIX hydrolase domain RAM_36525 IPR020084 NUDIX hydrolase, conserved site RAM_36525 IPR015797 NUDIX hydrolase-like domain superfamily RAM_36555 IPR023850 Putative mycofactocin binding protein MftB RAM_36560 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_36560 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_36560 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_36560 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_36560 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_36560 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_36560 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_36565 IPR020843 Polyketide synthase, enoylreductase domain RAM_36565 IPR011032 GroES-like superfamily RAM_36565 IPR013149 Alcohol dehydrogenase, C-terminal RAM_36565 IPR013154 Alcohol dehydrogenase, N-terminal RAM_36565 IPR036291 NAD(P)-binding domain superfamily RAM_36570 IPR033248 Transketolase, C-terminal domain RAM_36570 IPR005475 Transketolase-like, pyrimidine-binding domain RAM_36570 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_36570 IPR029061 Thiamin diphosphate-binding fold RAM_36575 IPR000873 AMP-dependent synthetase/ligase RAM_36575 IPR020459 AMP-binding RAM_36575 IPR020845 AMP-binding, conserved site RAM_36575 IPR042099 AMP-dependent synthetase-like superfamily RAM_36575 IPR025110 AMP-binding enzyme, C-terminal domain RAM_36580 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_36580 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_36580 IPR036291 NAD(P)-binding domain superfamily RAM_36585 IPR001753 Enoyl-CoA hydratase/isomerase RAM_36585 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_36585 IPR029045 ClpP/crotonase-like domain superfamily RAM_36585 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_36605 IPR011701 Major facilitator superfamily RAM_36605 IPR036259 MFS transporter superfamily RAM_36605 IPR020846 Major facilitator superfamily domain RAM_36625 IPR040442 Pyruvate kinase-like domain superfamily RAM_36625 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RAM_36625 IPR011206 Citrate lyase beta subunit-like RAM_36625 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RAM_36630 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A RAM_36630 IPR036661 Luciferase-like domain superfamily RAM_36630 IPR011251 Luciferase-like domain RAM_36635 IPR011711 GntR, C-terminal RAM_36635 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_36635 IPR036390 Winged helix DNA-binding domain superfamily RAM_36635 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_36635 IPR000524 Transcription regulator HTH, GntR RAM_36640 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_36640 IPR016161 Aldehyde/histidinol dehydrogenase RAM_36640 IPR016160 Aldehyde dehydrogenase, cysteine active site RAM_36640 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_36640 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_36640 IPR015590 Aldehyde dehydrogenase domain RAM_36645 IPR023606 CoA-transferase family III domain superfamily RAM_36645 IPR003673 CoA-transferase family III RAM_36660 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_36660 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_36660 IPR036291 NAD(P)-binding domain superfamily RAM_36660 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_36665 IPR023753 FAD/NAD(P)-binding domain RAM_36665 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_36675 IPR036396 Cytochrome P450 superfamily RAM_36675 IPR017972 Cytochrome P450, conserved site RAM_36675 IPR002397 Cytochrome P450, B-class RAM_36675 IPR001128 Cytochrome P450 RAM_36680 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_36680 IPR001080 3Fe-4S ferredoxin RAM_36685 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_36685 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_36685 IPR023753 FAD/NAD(P)-binding domain RAM_36685 IPR028202 Reductase, C-terminal RAM_36690 IPR036291 NAD(P)-binding domain superfamily RAM_36690 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_36690 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_36690 IPR011283 Acetoacetyl-CoA reductase RAM_36695 IPR003779 Carboxymuconolactone decarboxylase-like RAM_36695 IPR029032 AhpD-like RAM_36695 IPR012788 4-carboxymuconolactone decarboxylase RAM_36705 IPR001647 DNA-binding HTH domain, TetR-type RAM_36705 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_36705 IPR009057 Homeobox-like domain superfamily RAM_36720 IPR014188 Acrylyl-CoA reductase AcuI RAM_36720 IPR036291 NAD(P)-binding domain superfamily RAM_36720 IPR011032 GroES-like superfamily RAM_36720 IPR013154 Alcohol dehydrogenase, N-terminal RAM_36720 IPR020843 Polyketide synthase, enoylreductase domain RAM_36720 IPR013149 Alcohol dehydrogenase, C-terminal RAM_36750 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_36750 IPR017871 ABC transporter, conserved site RAM_36750 IPR003439 ABC transporter-like RAM_36750 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein RAM_36750 IPR003593 AAA+ ATPase domain RAM_36755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_36755 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal RAM_36755 IPR003439 ABC transporter-like RAM_36755 IPR017871 ABC transporter, conserved site RAM_36755 IPR003593 AAA+ ATPase domain RAM_36770 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_36770 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_36770 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_36770 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_36770 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_36770 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_36775 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_36775 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_36775 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_36775 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_36775 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_36775 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_36780 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_36780 IPR036291 NAD(P)-binding domain superfamily RAM_36780 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_36785 IPR011711 GntR, C-terminal RAM_36785 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_36785 IPR036390 Winged helix DNA-binding domain superfamily RAM_36785 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_36785 IPR000524 Transcription regulator HTH, GntR RAM_36795 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_36795 IPR036291 NAD(P)-binding domain superfamily RAM_36795 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_36795 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_36800 IPR001227 Acyl transferase domain superfamily RAM_36800 IPR036736 ACP-like superfamily RAM_36800 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_36800 IPR013149 Alcohol dehydrogenase, C-terminal RAM_36800 IPR009081 Phosphopantetheine binding ACP domain RAM_36800 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_36800 IPR013968 Polyketide synthase, ketoreductase domain RAM_36800 IPR020843 Polyketide synthase, enoylreductase domain RAM_36800 IPR016039 Thiolase-like RAM_36800 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_36800 IPR020807 Polyketide synthase, dehydratase domain RAM_36800 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_36800 IPR036291 NAD(P)-binding domain superfamily RAM_36800 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_36800 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_36800 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_36800 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_36800 IPR018201 Beta-ketoacyl synthase, active site RAM_36800 IPR011032 GroES-like superfamily RAM_36800 IPR013154 Alcohol dehydrogenase, N-terminal RAM_36800 IPR014043 Acyl transferase RAM_36805 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_36805 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_36805 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_36805 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_36805 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_36805 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_36810 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_36810 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_36810 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_36810 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_36810 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_36810 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_36820 IPR001128 Cytochrome P450 RAM_36820 IPR002397 Cytochrome P450, B-class RAM_36820 IPR017972 Cytochrome P450, conserved site RAM_36820 IPR036396 Cytochrome P450 superfamily RAM_36825 IPR022852 Carnitinyl-CoA dehydratase RAM_36825 IPR029045 ClpP/crotonase-like domain superfamily RAM_36825 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_36825 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_36825 IPR001753 Enoyl-CoA hydratase/isomerase RAM_36835 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_36835 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_36835 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_36835 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_36835 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_36835 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_36840 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_36840 IPR036291 NAD(P)-binding domain superfamily RAM_36840 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_36850 IPR023606 CoA-transferase family III domain superfamily RAM_36850 IPR003673 CoA-transferase family III RAM_36865 IPR023985 Mycofactocin-dependent oxidoreductase RAM_36865 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_36865 IPR036291 NAD(P)-binding domain superfamily RAM_36890 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RAM_36890 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_36890 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RAM_36895 IPR029016 GAF-like domain superfamily RAM_36895 IPR014757 Transcription regulator IclR, C-terminal RAM_36895 IPR005471 Transcription regulator IclR, N-terminal RAM_36895 IPR036390 Winged helix DNA-binding domain superfamily RAM_36895 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_36900 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RAM_36900 IPR037523 Vicinal oxygen chelate (VOC) domain RAM_36900 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RAM_36905 IPR000639 Epoxide hydrolase-like RAM_36905 IPR000073 Alpha/beta hydrolase fold-1 RAM_36905 IPR029058 Alpha/Beta hydrolase fold RAM_36910 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_36910 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_36910 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RAM_36910 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_36915 IPR002563 Flavin reductase like domain RAM_36915 IPR012349 FMN-binding split barrel RAM_36920 IPR036291 NAD(P)-binding domain superfamily RAM_36920 IPR023985 Mycofactocin-dependent oxidoreductase RAM_36920 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_36925 IPR012349 FMN-binding split barrel RAM_36925 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal RAM_36925 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site RAM_36925 IPR000659 Pyridoxamine 5'-phosphate oxidase RAM_36925 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative RAM_36930 IPR020613 Thiolase, conserved site RAM_36930 IPR016039 Thiolase-like RAM_36930 IPR012805 Acetyl-CoA C-acyltransferase FadA RAM_36930 IPR002155 Thiolase RAM_36930 IPR020615 Thiolase, acyl-enzyme intermediate active site RAM_36930 IPR020610 Thiolase, active site RAM_36930 IPR020617 Thiolase, C-terminal RAM_36930 IPR020616 Thiolase, N-terminal RAM_36935 IPR003673 CoA-transferase family III RAM_36935 IPR023606 CoA-transferase family III domain superfamily RAM_36940 IPR029045 ClpP/crotonase-like domain superfamily RAM_36940 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_36940 IPR001753 Enoyl-CoA hydratase/isomerase RAM_36940 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_36945 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_36945 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_36945 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_36945 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_36945 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_36945 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_36945 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_36950 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_36950 IPR036291 NAD(P)-binding domain superfamily RAM_36950 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_36970 IPR025110 AMP-binding enzyme, C-terminal domain RAM_36970 IPR020845 AMP-binding, conserved site RAM_36970 IPR020459 AMP-binding RAM_36970 IPR042099 AMP-dependent synthetase-like superfamily RAM_36970 IPR000873 AMP-dependent synthetase/ligase RAM_36980 IPR029045 ClpP/crotonase-like domain superfamily RAM_36980 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_36980 IPR001753 Enoyl-CoA hydratase/isomerase RAM_36980 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_36985 IPR020613 Thiolase, conserved site RAM_36985 IPR020615 Thiolase, acyl-enzyme intermediate active site RAM_36985 IPR020616 Thiolase, N-terminal RAM_36985 IPR002155 Thiolase RAM_36985 IPR016039 Thiolase-like RAM_36985 IPR020617 Thiolase, C-terminal RAM_36985 IPR020610 Thiolase, active site RAM_36990 IPR029045 ClpP/crotonase-like domain superfamily RAM_36990 IPR001753 Enoyl-CoA hydratase/isomerase RAM_36990 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_36990 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB RAM_37005 IPR003673 CoA-transferase family III RAM_37005 IPR017659 Formyl-CoA:oxalate CoA-transferase RAM_37005 IPR023606 CoA-transferase family III domain superfamily RAM_37010 IPR029045 ClpP/crotonase-like domain superfamily RAM_37010 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_37010 IPR001753 Enoyl-CoA hydratase/isomerase RAM_37010 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_37020 IPR011005 Dihydropteroate synthase-like RAM_37020 IPR000489 Pterin-binding domain RAM_37020 IPR006390 Dihydropteroate synthase RAM_37030 IPR016161 Aldehyde/histidinol dehydrogenase RAM_37030 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_37030 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_37030 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_37030 IPR015590 Aldehyde dehydrogenase domain RAM_37030 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RAM_37040 IPR017972 Cytochrome P450, conserved site RAM_37040 IPR001128 Cytochrome P450 RAM_37040 IPR002397 Cytochrome P450, B-class RAM_37040 IPR036396 Cytochrome P450 superfamily RAM_37045 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_37045 IPR001080 3Fe-4S ferredoxin RAM_37050 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_37050 IPR028202 Reductase, C-terminal RAM_37050 IPR023753 FAD/NAD(P)-binding domain RAM_37050 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_37055 IPR011283 Acetoacetyl-CoA reductase RAM_37055 IPR036291 NAD(P)-binding domain superfamily RAM_37055 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_37055 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_37060 IPR020946 Flavin monooxygenase-like RAM_37060 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_37065 IPR020946 Flavin monooxygenase-like RAM_37065 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_37085 IPR036291 NAD(P)-binding domain superfamily RAM_37085 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_37085 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_37100 IPR001647 DNA-binding HTH domain, TetR-type RAM_37100 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_37100 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_37100 IPR009057 Homeobox-like domain superfamily RAM_37100 IPR013572 Transcription regulator MAATS, C-terminal RAM_37130 IPR017972 Cytochrome P450, conserved site RAM_37130 IPR036396 Cytochrome P450 superfamily RAM_37130 IPR002397 Cytochrome P450, B-class RAM_37130 IPR001128 Cytochrome P450 RAM_37135 IPR028202 Reductase, C-terminal RAM_37135 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_37135 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_37135 IPR023753 FAD/NAD(P)-binding domain RAM_37140 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_37140 IPR001080 3Fe-4S ferredoxin RAM_37145 IPR020843 Polyketide synthase, enoylreductase domain RAM_37145 IPR036291 NAD(P)-binding domain superfamily RAM_37145 IPR011032 GroES-like superfamily RAM_37145 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_37145 IPR013154 Alcohol dehydrogenase, N-terminal RAM_37145 IPR013149 Alcohol dehydrogenase, C-terminal RAM_37155 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_37155 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_37160 IPR001789 Signal transduction response regulator, receiver domain RAM_37160 IPR011006 CheY-like superfamily RAM_37160 IPR016032 Signal transduction response regulator, C-terminal effector RAM_37160 IPR000792 Transcription regulator LuxR, C-terminal RAM_37165 IPR000873 AMP-dependent synthetase/ligase RAM_37165 IPR042099 AMP-dependent synthetase-like superfamily RAM_37165 IPR020845 AMP-binding, conserved site RAM_37170 IPR020845 AMP-binding, conserved site RAM_37170 IPR000873 AMP-dependent synthetase/ligase RAM_37170 IPR042099 AMP-dependent synthetase-like superfamily RAM_37180 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site RAM_37180 IPR023592 D-galactonate dehydratase RAM_37180 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_37180 IPR029065 Enolase C-terminal domain-like RAM_37180 IPR029017 Enolase-like, N-terminal RAM_37180 IPR036849 Enolase-like, C-terminal domain superfamily RAM_37180 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_37180 IPR034593 Mandelate racemase-like RAM_37185 IPR011701 Major facilitator superfamily RAM_37185 IPR020846 Major facilitator superfamily domain RAM_37185 IPR036259 MFS transporter superfamily RAM_37185 IPR000849 Sugar phosphate transporter RAM_37220 IPR036409 Class II aldolase/adducin N-terminal domain superfamily RAM_37220 IPR001303 Class II aldolase/adducin N-terminal RAM_37225 IPR020846 Major facilitator superfamily domain RAM_37225 IPR011701 Major facilitator superfamily RAM_37225 IPR036259 MFS transporter superfamily RAM_37225 IPR004736 MFS transporter, metabolite:H symporter RAM_37225 IPR005828 Major facilitator, sugar transporter-like RAM_37225 IPR005829 Sugar transporter, conserved site RAM_37230 IPR001279 Metallo-beta-lactamase RAM_37230 IPR022877 Protein of unknown funcion UPF0173 RAM_37230 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_37255 IPR010371 Uncharacterised protein family UPF0303 RAM_37255 IPR038084 GlcG-like domain superfamily RAM_37255 IPR005624 Haem-degrading RAM_37260 IPR000683 Oxidoreductase, N-terminal RAM_37260 IPR036291 NAD(P)-binding domain superfamily RAM_37260 IPR004104 Oxidoreductase, C-terminal RAM_37265 IPR039672 Lactose permease-like RAM_37265 IPR036259 MFS transporter superfamily RAM_37265 IPR018043 Sodium:galactoside symporter, conserved site RAM_37270 IPR000843 LacI-type HTH domain RAM_37270 IPR028082 Periplasmic binding protein-like I RAM_37270 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_37280 IPR006059 Bacterial extracellular solute-binding protein RAM_37285 IPR035906 MetI-like superfamily RAM_37285 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_37290 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_37290 IPR035906 MetI-like superfamily RAM_37300 IPR029058 Alpha/Beta hydrolase fold RAM_37300 IPR000073 Alpha/beta hydrolase fold-1 RAM_37300 IPR026968 3-oxoadipate enol-lactonase 1/2 RAM_37305 IPR036390 Winged helix DNA-binding domain superfamily RAM_37305 IPR000524 Transcription regulator HTH, GntR RAM_37305 IPR023730 HTH-type transcriptional repressor NanR RAM_37305 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_37305 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_37305 IPR011711 GntR, C-terminal RAM_37310 IPR026968 3-oxoadipate enol-lactonase 1/2 RAM_37310 IPR000073 Alpha/beta hydrolase fold-1 RAM_37310 IPR029058 Alpha/Beta hydrolase fold RAM_37325 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site RAM_37325 IPR015815 3-hydroxyisobutyrate dehydrogenase-related RAM_37325 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_37325 IPR006398 2-hydroxy-3-oxopropionate reductase RAM_37325 IPR036291 NAD(P)-binding domain superfamily RAM_37325 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RAM_37325 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain RAM_37325 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_37330 IPR019800 Glycoside hydrolase, family 3, active site RAM_37330 IPR002772 Glycoside hydrolase family 3 C-terminal domain RAM_37330 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily RAM_37330 IPR011658 PA14 domain RAM_37330 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_37330 IPR017853 Glycoside hydrolase superfamily RAM_37330 IPR013783 Immunoglobulin-like fold RAM_37330 IPR037524 PA14/GLEYA domain RAM_37330 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_37330 IPR008979 Galactose-binding-like domain superfamily RAM_37330 IPR026891 Fibronectin type III-like domain RAM_37335 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RAM_37335 IPR029009 Allosteric substrate binding domain superfamily RAM_37335 IPR036291 NAD(P)-binding domain superfamily RAM_37335 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RAM_37335 IPR006236 D-3-phosphoglycerate dehydrogenase RAM_37335 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RAM_37335 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RAM_37335 IPR002912 ACT domain RAM_37340 IPR036291 NAD(P)-binding domain superfamily RAM_37340 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_37340 IPR013752 Ketopantoate reductase, C-terminal domain RAM_37340 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_37340 IPR013332 Ketopantoate reductase, N-terminal domain RAM_37345 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_37345 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_37345 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_37345 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_37345 IPR012799 Fatty oxidation complex, alpha subunit FadB RAM_37345 IPR001753 Enoyl-CoA hydratase/isomerase RAM_37345 IPR036291 NAD(P)-binding domain superfamily RAM_37345 IPR029045 ClpP/crotonase-like domain superfamily RAM_37345 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RAM_37350 IPR011761 ATP-grasp fold RAM_37350 IPR013815 ATP-grasp fold, subdomain 1 RAM_37350 IPR006284 Glutathione synthetase, prokaryotic RAM_37350 IPR004218 Prokaryotic glutathione synthetase, ATP-binding RAM_37350 IPR004215 Prokaryotic glutathione synthetase, N-terminal RAM_37350 IPR016185 Pre-ATP-grasp domain superfamily RAM_37365 IPR003673 CoA-transferase family III RAM_37365 IPR023606 CoA-transferase family III domain superfamily RAM_37370 IPR036249 Thioredoxin-like superfamily RAM_37370 IPR010987 Glutathione S-transferase, C-terminal-like RAM_37370 IPR036282 Glutathione S-transferase, C-terminal domain superfamily RAM_37370 IPR040079 Glutathione Transferase family RAM_37370 IPR004045 Glutathione S-transferase, N-terminal RAM_37370 IPR004046 Glutathione S-transferase, C-terminal RAM_37370 IPR034341 Stringent starvation protein A, N-terminal RAM_37380 IPR020846 Major facilitator superfamily domain RAM_37380 IPR036259 MFS transporter superfamily RAM_37380 IPR011701 Major facilitator superfamily RAM_37385 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain RAM_37395 IPR022694 3-hydroxyacyl-CoA dehydrogenase RAM_37395 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_37395 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_37395 IPR036291 NAD(P)-binding domain superfamily RAM_37395 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_37395 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_37395 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RAM_37450 IPR041468 ParB/Spo0J, HTH domain RAM_37450 IPR004437 ParB/RepB/Spo0J partition protein RAM_37450 IPR036086 ParB/Sulfiredoxin superfamily RAM_37450 IPR003115 ParB/Sulfiredoxin RAM_37470 IPR042254 Lsr2, DNA binding domain RAM_37470 IPR024412 Lsr2 RAM_37470 IPR042261 Lsr2, dimerization domain RAM_37575 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II RAM_37575 IPR037523 Vicinal oxygen chelate (VOC) domain RAM_37575 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RAM_37575 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RAM_37575 IPR017624 Catechol 2,3 dioxygenase RAM_37585 IPR000489 Pterin-binding domain RAM_37585 IPR011005 Dihydropteroate synthase-like RAM_37585 IPR006390 Dihydropteroate synthase RAM_37635 IPR010359 IrrE N-terminal-like domain RAM_37670 IPR001509 NAD-dependent epimerase/dehydratase RAM_37670 IPR036291 NAD(P)-binding domain superfamily RAM_37700 IPR020050 FO synthase, subunit 2 RAM_37700 IPR034405 F420, menaquinone cofactor biosynthesis RAM_37700 IPR006638 Elp3/MiaB/NifB RAM_37700 IPR019940 CofH family RAM_37700 IPR019939 CofG family RAM_37700 IPR013785 Aldolase-type TIM barrel RAM_37700 IPR007197 Radical SAM RAM_37705 IPR034405 F420, menaquinone cofactor biosynthesis RAM_37705 IPR020050 FO synthase, subunit 2 RAM_37705 IPR007197 Radical SAM RAM_37705 IPR013785 Aldolase-type TIM barrel RAM_37705 IPR019939 CofG family RAM_37705 IPR019940 CofH family RAM_37705 IPR006638 Elp3/MiaB/NifB RAM_37710 IPR036661 Luciferase-like domain superfamily RAM_37710 IPR011251 Luciferase-like domain RAM_37710 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related RAM_37710 IPR031017 TAT-translocated F420-dependent dehydrogenase, FGD2 family RAM_37715 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_37715 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_37715 IPR036291 NAD(P)-binding domain superfamily RAM_37720 IPR004026 Ada DNA repair, metal-binding RAM_37720 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_37720 IPR016221 Bifunctional regulatory protein Ada RAM_37720 IPR035451 Ada-like domain superfamily RAM_37720 IPR009057 Homeobox-like domain superfamily RAM_37720 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RAM_37720 IPR018060 DNA binding HTH domain, AraC-type RAM_37720 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RAM_37720 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain RAM_37720 IPR018062 HTH domain AraC-type, conserved site RAM_37720 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RAM_37720 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily RAM_37725 IPR002397 Cytochrome P450, B-class RAM_37725 IPR001128 Cytochrome P450 RAM_37725 IPR017972 Cytochrome P450, conserved site RAM_37725 IPR036396 Cytochrome P450 superfamily RAM_37730 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_37730 IPR039425 RNA polymerase sigma-70 like RAM_37730 IPR013325 RNA polymerase sigma factor, region 2 RAM_37730 IPR037401 SnoaL-like domain RAM_37730 IPR014305 RNA polymerase sigma-G type, actinobacteria RAM_37730 IPR014284 RNA polymerase sigma-70 like domain RAM_37730 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_37730 IPR032710 NTF2-like domain superfamily RAM_37730 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_37730 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_37730 IPR007627 RNA polymerase sigma-70 region 2 RAM_37735 IPR036318 FAD-binding, type PCMH-like superfamily RAM_37735 IPR016166 FAD-binding domain, PCMH-type RAM_37735 IPR006094 FAD linked oxidase, N-terminal RAM_37735 IPR012951 Berberine/berberine-like RAM_37735 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_37740 IPR036661 Luciferase-like domain superfamily RAM_37740 IPR011251 Luciferase-like domain RAM_37740 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted RAM_37750 IPR020846 Major facilitator superfamily domain RAM_37750 IPR005829 Sugar transporter, conserved site RAM_37750 IPR011701 Major facilitator superfamily RAM_37750 IPR036259 MFS transporter superfamily RAM_37790 IPR000556 Glycoside hydrolase, 48F RAM_37790 IPR013783 Immunoglobulin-like fold RAM_37790 IPR027390 Endoglucanase F, domain 3 RAM_37790 IPR012341 Six-hairpin glycosidase-like superfamily RAM_37790 IPR001919 Carbohydrate-binding type-2 domain RAM_37790 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_37790 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_37790 IPR018366 Carbohydrate-binding type-2, conserved site RAM_37790 IPR036116 Fibronectin type III superfamily RAM_37790 IPR003961 Fibronectin type III RAM_37790 IPR008928 Six-hairpin glycosidase superfamily RAM_37790 IPR023309 Endoglucanase F, domain 2 RAM_37810 IPR018062 HTH domain AraC-type, conserved site RAM_37810 IPR032783 AraC-type transcription regulator, ligand-binding domain RAM_37810 IPR009057 Homeobox-like domain superfamily RAM_37810 IPR018060 DNA binding HTH domain, AraC-type RAM_37820 IPR029057 Phosphoribosyltransferase-like RAM_37820 IPR005764 Adenine phosphoribosyl transferase RAM_37820 IPR000836 Phosphoribosyltransferase domain RAM_37845 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_37845 IPR035906 MetI-like superfamily RAM_37845 IPR011864 Phosphate ABC transporter, permease protein PstC RAM_37850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_37850 IPR035906 MetI-like superfamily RAM_37850 IPR005672 Phosphate transport system permease protein PstA RAM_37855 IPR015850 ABC transporter, phosphate import, PstB RAM_37855 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_37855 IPR003593 AAA+ ATPase domain RAM_37855 IPR003439 ABC transporter-like RAM_37855 IPR005670 Phosphate transport system permease protein 1 RAM_37855 IPR017871 ABC transporter, conserved site RAM_37860 IPR024370 PBP domain RAM_37860 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS RAM_37875 IPR009057 Homeobox-like domain superfamily RAM_37875 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_37875 IPR001647 DNA-binding HTH domain, TetR-type RAM_37880 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_37880 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_37880 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_37880 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_37880 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RAM_37905 IPR036928 Amidase signature (AS) superfamily RAM_37905 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RAM_37905 IPR020556 Amidase, conserved site RAM_37905 IPR000120 Amidase RAM_37905 IPR023631 Amidase signature domain RAM_37920 IPR005119 LysR, substrate-binding RAM_37920 IPR000847 Transcription regulator HTH, LysR RAM_37920 IPR036390 Winged helix DNA-binding domain superfamily RAM_37920 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_37935 IPR002772 Glycoside hydrolase family 3 C-terminal domain RAM_37935 IPR013783 Immunoglobulin-like fold RAM_37935 IPR017853 Glycoside hydrolase superfamily RAM_37935 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_37935 IPR019800 Glycoside hydrolase, family 3, active site RAM_37935 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_37935 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily RAM_37935 IPR026891 Fibronectin type III-like domain RAM_37940 IPR036291 NAD(P)-binding domain superfamily RAM_37940 IPR001509 NAD-dependent epimerase/dehydratase RAM_37940 IPR010099 Epimerase family protein SDR39U1 RAM_37940 IPR013549 Domain of unknown function DUF1731 RAM_37950 IPR017853 Glycoside hydrolase superfamily RAM_37950 IPR001547 Glycoside hydrolase, family 5 RAM_37950 IPR018087 Glycoside hydrolase, family 5, conserved site RAM_37960 IPR003593 AAA+ ATPase domain RAM_37960 IPR003439 ABC transporter-like RAM_37960 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_37960 IPR017871 ABC transporter, conserved site RAM_37965 IPR013783 Immunoglobulin-like fold RAM_37965 IPR001701 Glycoside hydrolase family 9 RAM_37965 IPR008979 Galactose-binding-like domain superfamily RAM_37965 IPR018221 Glycoside hydrolase family 9, His active site RAM_37965 IPR003305 Carbohydrate-binding, CenC-like RAM_37965 IPR014756 Immunoglobulin E-set RAM_37965 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites RAM_37965 IPR012341 Six-hairpin glycosidase-like superfamily RAM_37965 IPR008928 Six-hairpin glycosidase superfamily RAM_37965 IPR004197 Cellulase, Ig-like domain RAM_37970 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain RAM_37970 IPR013785 Aldolase-type TIM barrel RAM_37970 IPR002241 Glycoside hydrolase, family 27 RAM_37970 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_37970 IPR013780 Glycosyl hydrolase, all-beta RAM_37970 IPR017853 Glycoside hydrolase superfamily RAM_38015 IPR001296 Glycosyl transferase, family 1 RAM_38035 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_38035 IPR011875 Alpha-maltose-1-phosphate synthase RAM_38035 IPR001296 Glycosyl transferase, family 1 RAM_38040 IPR001296 Glycosyl transferase, family 1 RAM_38040 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_38040 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA RAM_38050 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ RAM_38050 IPR003362 Bacterial sugar transferase RAM_38050 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase RAM_38055 IPR039528 DPM1-like RAM_38055 IPR001173 Glycosyltransferase 2-like RAM_38055 IPR029044 Nucleotide-diphospho-sugar transferases RAM_38065 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain RAM_38065 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB RAM_38065 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like RAM_38085 IPR039448 Right handed beta helix domain RAM_38085 IPR012334 Pectin lyase fold RAM_38085 IPR011050 Pectin lyase fold/virulence factor RAM_38090 IPR006101 Glycoside hydrolase, family 2 RAM_38090 IPR008964 Invasin/intimin cell-adhesion fragments RAM_38090 IPR006104 Glycosyl hydrolases family 2, sugar binding domain RAM_38090 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily RAM_38090 IPR023232 Glycoside hydrolase, family 2, active site RAM_38090 IPR017853 Glycoside hydrolase superfamily RAM_38090 IPR040605 Glycoside hydrolase family 2, domain 5 RAM_38090 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich RAM_38090 IPR032311 Domain of unknown function DUF4982 RAM_38090 IPR013783 Immunoglobulin-like fold RAM_38090 IPR006103 Glycoside hydrolase family 2, catalytic domain RAM_38090 IPR008979 Galactose-binding-like domain superfamily RAM_38095 IPR034641 Polysaccharide lyase family 11 RAM_38095 IPR013783 Immunoglobulin-like fold RAM_38095 IPR041624 Rhamnogalacturonan I lyase beta-sheet domain RAM_38105 IPR017853 Glycoside hydrolase superfamily RAM_38105 IPR018087 Glycoside hydrolase, family 5, conserved site RAM_38105 IPR001547 Glycoside hydrolase, family 5 RAM_38105 IPR002883 CBM10/dockerin domain RAM_38105 IPR009031 Carbohydrate binding module family 10 RAM_38105 IPR036601 CBM10 superfamily RAM_38110 IPR017853 Glycoside hydrolase superfamily RAM_38110 IPR011683 Glycosyl hydrolase family 53 RAM_38125 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_38125 IPR035906 MetI-like superfamily RAM_38130 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_38130 IPR035906 MetI-like superfamily RAM_38155 IPR003658 Anti-sigma factor antagonist RAM_38155 IPR002645 STAS domain RAM_38155 IPR036513 STAS domain superfamily RAM_38170 IPR000073 Alpha/beta hydrolase fold-1 RAM_38170 IPR029058 Alpha/Beta hydrolase fold RAM_38175 IPR001932 PPM-type phosphatase domain RAM_38175 IPR003660 HAMP domain RAM_38175 IPR036457 PPM-type phosphatase domain superfamily RAM_38185 IPR002220 DapA-like RAM_38185 IPR020625 Schiff base-forming aldolase, active site RAM_38185 IPR013785 Aldolase-type TIM barrel RAM_38185 IPR020624 Schiff base-forming aldolase, conserved site RAM_38185 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RAM_38190 IPR036390 Winged helix DNA-binding domain superfamily RAM_38190 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_38190 IPR000847 Transcription regulator HTH, LysR RAM_38190 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain RAM_38190 IPR005119 LysR, substrate-binding RAM_38195 IPR023576 UbiE/COQ5 methyltransferase, conserved site RAM_38195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_38195 IPR004033 UbiE/COQ5 methyltransferase RAM_38205 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising RAM_38205 IPR035466 GlmS/AgaS, SIS domain 1 RAM_38205 IPR035490 GlmS/FrlB, SIS domain 2 RAM_38205 IPR001347 Sugar isomerase (SIS) RAM_38205 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_38205 IPR017932 Glutamine amidotransferase type 2 domain RAM_38215 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_38215 IPR023753 FAD/NAD(P)-binding domain RAM_38215 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_38215 IPR028202 Reductase, C-terminal RAM_38220 IPR001080 3Fe-4S ferredoxin RAM_38220 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_38230 IPR036396 Cytochrome P450 superfamily RAM_38230 IPR001128 Cytochrome P450 RAM_38230 IPR002397 Cytochrome P450, B-class RAM_38230 IPR017972 Cytochrome P450, conserved site RAM_38245 IPR023210 NADP-dependent oxidoreductase domain RAM_38245 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_38250 IPR019914 Pyrimidine monooxygenase RutA RAM_38250 IPR036661 Luciferase-like domain superfamily RAM_38250 IPR011251 Luciferase-like domain RAM_38265 IPR008928 Six-hairpin glycosidase superfamily RAM_38265 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_38265 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_38265 IPR013783 Immunoglobulin-like fold RAM_38265 IPR018366 Carbohydrate-binding type-2, conserved site RAM_38265 IPR012341 Six-hairpin glycosidase-like superfamily RAM_38265 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites RAM_38265 IPR001701 Glycoside hydrolase family 9 RAM_38265 IPR036116 Fibronectin type III superfamily RAM_38265 IPR001956 Carbohydrate-binding module 3 RAM_38265 IPR036966 Carbohydrate-binding module 3 superfamily RAM_38265 IPR001919 Carbohydrate-binding type-2 domain RAM_38265 IPR003961 Fibronectin type III RAM_38265 IPR018221 Glycoside hydrolase family 9, His active site RAM_38270 IPR040982 DNA polymerase III alpha subunit finger domain RAM_38270 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain RAM_38270 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RAM_38270 IPR023073 DNA polymerase, error-prone RAM_38270 IPR029460 DNA polymerase, helix-hairpin-helix motif RAM_38270 IPR004013 PHP domain RAM_38270 IPR003141 Polymerase/histidinol phosphatase, N-terminal RAM_38270 IPR016195 Polymerase/histidinol phosphatase-like RAM_38270 IPR004805 DNA polymerase III, alpha subunit RAM_38275 IPR014284 RNA polymerase sigma-70 like domain RAM_38275 IPR007627 RNA polymerase sigma-70 region 2 RAM_38275 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_38275 IPR013325 RNA polymerase sigma factor, region 2 RAM_38275 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_38275 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_38275 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_38280 IPR005545 YCII-related RAM_38280 IPR011008 Dimeric alpha-beta barrel RAM_38290 IPR011193 Ornithine/lysine/arginine decarboxylase RAM_38290 IPR000310 Orn/Lys/Arg decarboxylase, major domain RAM_38290 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal RAM_38290 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily RAM_38290 IPR015424 Pyridoxal phosphate-dependent transferase RAM_38290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_38290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_38290 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal RAM_38305 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative RAM_38305 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp RAM_38305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_38310 IPR029058 Alpha/Beta hydrolase fold RAM_38310 IPR000073 Alpha/beta hydrolase fold-1 RAM_38315 IPR036390 Winged helix DNA-binding domain superfamily RAM_38315 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_38315 IPR000524 Transcription regulator HTH, GntR RAM_38320 IPR003439 ABC transporter-like RAM_38320 IPR003593 AAA+ ATPase domain RAM_38320 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_38340 IPR024038 MYXO-CTERM domain RAM_38340 IPR010126 Esterase, PHB depolymerase RAM_38340 IPR029058 Alpha/Beta hydrolase fold RAM_38345 IPR001087 GDSL lipase/esterase RAM_38345 IPR036439 Dockerin domain superfamily RAM_38345 IPR016134 Dockerin domain RAM_38345 IPR002105 Dockerin type I repeat RAM_38345 IPR029058 Alpha/Beta hydrolase fold RAM_38345 IPR036514 SGNH hydrolase superfamily RAM_38350 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_38350 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_38350 IPR036291 NAD(P)-binding domain superfamily RAM_38355 IPR041719 Ferritin, prokaryotic-type RAM_38355 IPR008331 Ferritin/DPS protein domain RAM_38355 IPR009078 Ferritin-like superfamily RAM_38355 IPR012347 Ferritin-like RAM_38355 IPR001519 Ferritin RAM_38355 IPR009040 Ferritin-like diiron domain RAM_38365 IPR001633 EAL domain RAM_38365 IPR035919 EAL domain superfamily RAM_38365 IPR000160 GGDEF domain RAM_38365 IPR005330 MHYT domain RAM_38365 IPR029787 Nucleotide cyclase RAM_38380 IPR004942 Roadblock/LAMTOR2 domain RAM_38400 IPR016040 NAD(P)-binding domain RAM_38400 IPR036291 NAD(P)-binding domain superfamily RAM_38405 IPR015946 K homology domain-like, alpha/beta RAM_38405 IPR019953 Organic hydroperoxide resistance protein famiy RAM_38405 IPR003718 OsmC/Ohr family RAM_38405 IPR036102 OsmC/Ohr superfamily RAM_38415 IPR029058 Alpha/Beta hydrolase fold RAM_38415 IPR000639 Epoxide hydrolase-like RAM_38415 IPR000073 Alpha/beta hydrolase fold-1 RAM_38420 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_38420 IPR016032 Signal transduction response regulator, C-terminal effector RAM_38420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_38420 IPR000792 Transcription regulator LuxR, C-terminal RAM_38420 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_38425 IPR011118 Tannase/feruloyl esterase RAM_38425 IPR029058 Alpha/Beta hydrolase fold RAM_38430 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_38430 IPR023210 NADP-dependent oxidoreductase domain RAM_38435 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_38435 IPR032466 Metal-dependent hydrolase RAM_38435 IPR026912 Adenine deaminase C-terminal domain RAM_38435 IPR006679 Adenine deaminase RAM_38435 IPR006680 Amidohydrolase-related RAM_38460 IPR026283 Beta-galactosidase 1-like RAM_38460 IPR019801 Glycoside hydrolase, family 35, conserved site RAM_38460 IPR031330 Glycoside hydrolase 35, catalytic domain RAM_38460 IPR017853 Glycoside hydrolase superfamily RAM_38460 IPR001944 Glycoside hydrolase, family 35 RAM_38460 IPR008979 Galactose-binding-like domain superfamily RAM_38465 IPR013780 Glycosyl hydrolase, all-beta RAM_38465 IPR017853 Glycoside hydrolase superfamily RAM_38465 IPR010720 Alpha-L-arabinofuranosidase, C-terminal RAM_38475 IPR035906 MetI-like superfamily RAM_38475 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_38480 IPR035906 MetI-like superfamily RAM_38480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_38485 IPR000843 LacI-type HTH domain RAM_38485 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_38485 IPR028082 Periplasmic binding protein-like I RAM_38505 IPR029058 Alpha/Beta hydrolase fold RAM_38505 IPR002925 Dienelactone hydrolase RAM_38510 IPR020843 Polyketide synthase, enoylreductase domain RAM_38510 IPR036291 NAD(P)-binding domain superfamily RAM_38510 IPR011032 GroES-like superfamily RAM_38510 IPR013154 Alcohol dehydrogenase, N-terminal RAM_38510 IPR013149 Alcohol dehydrogenase, C-terminal RAM_38515 IPR001647 DNA-binding HTH domain, TetR-type RAM_38515 IPR004111 Tetracycline repressor TetR, C-terminal RAM_38515 IPR009057 Homeobox-like domain superfamily RAM_38515 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_38515 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_38515 IPR003012 Tetracycline transcriptional regulator, TetR RAM_38525 IPR000782 FAS1 domain RAM_38525 IPR036378 FAS1 domain superfamily RAM_38535 IPR018764 Anti-sigma K factor RskA RAM_38540 IPR007627 RNA polymerase sigma-70 region 2 RAM_38540 IPR014284 RNA polymerase sigma-70 like domain RAM_38540 IPR007630 RNA polymerase sigma-70 region 4 RAM_38540 IPR039425 RNA polymerase sigma-70 like RAM_38540 IPR013325 RNA polymerase sigma factor, region 2 RAM_38540 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_38540 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_38545 IPR006776 Sporulation-specific cell division protein SsgB RAM_38545 IPR038658 Sporulation-specific cell division protein SsgB superfamily RAM_38550 IPR020845 AMP-binding, conserved site RAM_38550 IPR025110 AMP-binding enzyme, C-terminal domain RAM_38550 IPR000873 AMP-dependent synthetase/ligase RAM_38550 IPR010192 2-succinylbenzoate--CoA ligase RAM_38550 IPR042099 AMP-dependent synthetase-like superfamily RAM_38555 IPR037237 IlvD/EDD, N-terminal domain RAM_38555 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RAM_38555 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RAM_38555 IPR004404 Dihydroxy-acid dehydratase RAM_38555 IPR042096 Dihydroxy-acid dehydratase, C-terminal RAM_38560 IPR023940 Dihydrodipicolinate reductase RAM_38560 IPR000846 Dihydrodipicolinate reductase, N-terminal RAM_38560 IPR022663 Dihydrodipicolinate reductase, C-terminal RAM_38560 IPR022664 Dihydrodipicolinate reductase, conserved site RAM_38560 IPR036291 NAD(P)-binding domain superfamily RAM_38570 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_38570 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RAM_38570 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RAM_38570 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_38585 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_38585 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_38585 IPR039425 RNA polymerase sigma-70 like RAM_38585 IPR014284 RNA polymerase sigma-70 like domain RAM_38585 IPR007627 RNA polymerase sigma-70 region 2 RAM_38585 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_38585 IPR013325 RNA polymerase sigma factor, region 2 RAM_38585 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_38595 IPR013325 RNA polymerase sigma factor, region 2 RAM_38595 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_38595 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_38595 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_38595 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_38595 IPR007627 RNA polymerase sigma-70 region 2 RAM_38595 IPR039425 RNA polymerase sigma-70 like RAM_38595 IPR014284 RNA polymerase sigma-70 like domain RAM_38610 IPR006680 Amidohydrolase-related RAM_38610 IPR032466 Metal-dependent hydrolase RAM_38615 IPR000160 GGDEF domain RAM_38615 IPR005330 MHYT domain RAM_38615 IPR001633 EAL domain RAM_38615 IPR035919 EAL domain superfamily RAM_38615 IPR029787 Nucleotide cyclase RAM_38620 IPR037175 Kynurenine formamidase superfamily RAM_38620 IPR007325 Kynurenine formamidase/cyclase-like RAM_38640 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_38640 IPR001919 Carbohydrate-binding type-2 domain RAM_38640 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_38640 IPR029070 Chitinase insertion domain superfamily RAM_38640 IPR003961 Fibronectin type III RAM_38640 IPR036116 Fibronectin type III superfamily RAM_38640 IPR018366 Carbohydrate-binding type-2, conserved site RAM_38640 IPR001579 Glycoside hydrolase, chitinase active site RAM_38640 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_38640 IPR011583 Chitinase II RAM_38640 IPR017853 Glycoside hydrolase superfamily RAM_38640 IPR013783 Immunoglobulin-like fold RAM_38655 IPR016181 Acyl-CoA N-acyltransferase RAM_38655 IPR000182 GNAT domain RAM_38660 IPR004378 F420H(2)-dependent quinone reductase RAM_38660 IPR012349 FMN-binding split barrel RAM_38665 IPR023576 UbiE/COQ5 methyltransferase, conserved site RAM_38665 IPR004033 UbiE/COQ5 methyltransferase RAM_38665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_38670 IPR025736 PucR C-terminal helix-turn-helix domain RAM_38670 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_38670 IPR012914 Purine catabolism PurC-like domain RAM_38670 IPR041522 CdaR, GGDEF-like domain RAM_38680 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_38680 IPR001387 Cro/C1-type helix-turn-helix domain RAM_38690 IPR021424 Porin PorA RAM_38695 IPR026669 Arsenite methyltransferase-like RAM_38695 IPR013216 Methyltransferase type 11 RAM_38695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_38700 IPR001296 Glycosyl transferase, family 1 RAM_38700 IPR011835 Bacterial/plant glycogen synthase RAM_38700 IPR013534 Starch synthase, catalytic domain RAM_38725 IPR008979 Galactose-binding-like domain superfamily RAM_38725 IPR000421 Coagulation factor 5/8 C-terminal domain RAM_38725 IPR021798 Alpha-(1->3)-arabinofuranosyltransferase RAM_38750 IPR015424 Pyridoxal phosphate-dependent transferase RAM_38750 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_38750 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_38750 IPR036390 Winged helix DNA-binding domain superfamily RAM_38750 IPR000524 Transcription regulator HTH, GntR RAM_38755 IPR004675 Alkylhydroperoxidase AhpD core RAM_38755 IPR029032 AhpD-like RAM_38755 IPR003779 Carboxymuconolactone decarboxylase-like RAM_38760 IPR005829 Sugar transporter, conserved site RAM_38760 IPR036259 MFS transporter superfamily RAM_38760 IPR020846 Major facilitator superfamily domain RAM_38760 IPR011701 Major facilitator superfamily RAM_38765 IPR011701 Major facilitator superfamily RAM_38765 IPR020846 Major facilitator superfamily domain RAM_38765 IPR036259 MFS transporter superfamily RAM_38765 IPR005829 Sugar transporter, conserved site RAM_38780 IPR001478 PDZ domain RAM_38780 IPR041489 PDZ domain 6 RAM_38780 IPR036034 PDZ superfamily RAM_38780 IPR011782 Peptidase S1C, Do RAM_38780 IPR009003 Peptidase S1, PA clan RAM_38780 IPR001940 Peptidase S1C RAM_38785 IPR006222 Aminomethyltransferase, folate-binding domain RAM_38785 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal RAM_38785 IPR032503 FAD dependent oxidoreductase, central domain RAM_38785 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_38785 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RAM_38785 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RAM_38785 IPR006076 FAD dependent oxidoreductase RAM_38790 IPR002912 ACT domain RAM_38790 IPR004810 Formyltetrahydrofolate deformylase RAM_38790 IPR036477 Formyl transferase, N-terminal domain superfamily RAM_38790 IPR002376 Formyl transferase, N-terminal RAM_38790 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain RAM_38800 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily RAM_38800 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_38800 IPR023753 FAD/NAD(P)-binding domain RAM_38800 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RAM_38800 IPR041117 SoxA, A3 domain RAM_38800 IPR042204 2Fe-2S iron-sulfur cluster binding domain, N-terminal RAM_38800 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RAM_38800 IPR006222 Aminomethyltransferase, folate-binding domain RAM_38800 IPR006277 Sarcosine oxidase, alpha subunit RAM_38800 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal RAM_38805 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric RAM_38805 IPR038561 Sarcosine oxidase subunit delta superfamily RAM_38810 IPR006278 Sarcosine oxidase subunit beta RAM_38810 IPR006076 FAD dependent oxidoreductase RAM_38810 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_38815 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RAM_38815 IPR015424 Pyridoxal phosphate-dependent transferase RAM_38815 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_38815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_38815 IPR001085 Serine hydroxymethyltransferase RAM_38815 IPR039429 Serine hydroxymethyltransferase-like domain RAM_38820 IPR011711 GntR, C-terminal RAM_38820 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_38820 IPR000524 Transcription regulator HTH, GntR RAM_38820 IPR036390 Winged helix DNA-binding domain superfamily RAM_38820 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_38825 IPR039004 Carnitine monooxygenase oxygenase subunit RAM_38825 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RAM_38825 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RAM_38825 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site RAM_38825 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain RAM_38825 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit RAM_38830 IPR001647 DNA-binding HTH domain, TetR-type RAM_38830 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_38830 IPR009057 Homeobox-like domain superfamily RAM_38845 IPR027424 Glucose Oxidase, domain 2 RAM_38845 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RAM_38845 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RAM_38845 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_38845 IPR011533 Oxygen-dependent choline dehydrogenase RAM_38845 IPR012132 Glucose-methanol-choline oxidoreductase RAM_38855 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RAM_38855 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RAM_38860 IPR023753 FAD/NAD(P)-binding domain RAM_38860 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_38860 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RAM_38860 IPR028202 Reductase, C-terminal RAM_38870 IPR000639 Epoxide hydrolase-like RAM_38870 IPR000073 Alpha/beta hydrolase fold-1 RAM_38870 IPR016292 Epoxide hydrolase RAM_38870 IPR029058 Alpha/Beta hydrolase fold RAM_38890 IPR000089 Biotin/lipoyl attachment RAM_38890 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_38890 IPR036625 E3-binding domain superfamily RAM_38890 IPR004167 Peripheral subunit-binding domain RAM_38890 IPR011053 Single hybrid motif RAM_38890 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RAM_38895 IPR033248 Transketolase, C-terminal domain RAM_38895 IPR029061 Thiamin diphosphate-binding fold RAM_38895 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_38895 IPR005475 Transketolase-like, pyrimidine-binding domain RAM_38900 IPR001017 Dehydrogenase, E1 component RAM_38900 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha RAM_38900 IPR029061 Thiamin diphosphate-binding fold RAM_38915 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_38915 IPR013783 Immunoglobulin-like fold RAM_38915 IPR017853 Glycoside hydrolase superfamily RAM_38915 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_38915 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily RAM_38915 IPR002772 Glycoside hydrolase family 3 C-terminal domain RAM_38915 IPR026891 Fibronectin type III-like domain RAM_38930 IPR039420 Transcriptional regulatory protein WalR-like RAM_38930 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_38930 IPR011006 CheY-like superfamily RAM_38930 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_38930 IPR001789 Signal transduction response regulator, receiver domain RAM_38930 IPR016032 Signal transduction response regulator, C-terminal effector RAM_38935 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_38935 IPR000014 PAS domain RAM_38935 IPR003594 Histidine kinase/HSP90-like ATPase RAM_38935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_38935 IPR035965 PAS domain superfamily RAM_38935 IPR013767 PAS fold RAM_38935 IPR005467 Histidine kinase domain RAM_38935 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_38935 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_38935 IPR031967 PhoR, single Cache-like domain RAM_38940 IPR002938 FAD-binding domain RAM_38940 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_38940 IPR012733 4-hydroxybenzoate 3-monooxygenase RAM_38950 IPR003305 Carbohydrate-binding, CenC-like RAM_38950 IPR011583 Chitinase II RAM_38950 IPR003961 Fibronectin type III RAM_38950 IPR036116 Fibronectin type III superfamily RAM_38950 IPR008979 Galactose-binding-like domain superfamily RAM_38950 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_38950 IPR001579 Glycoside hydrolase, chitinase active site RAM_38950 IPR017853 Glycoside hydrolase superfamily RAM_38950 IPR013783 Immunoglobulin-like fold RAM_38965 IPR008271 Serine/threonine-protein kinase, active site RAM_38965 IPR017441 Protein kinase, ATP binding site RAM_38965 IPR005543 PASTA domain RAM_38965 IPR011009 Protein kinase-like domain superfamily RAM_38965 IPR000719 Protein kinase domain RAM_38985 IPR001845 HTH ArsR-type DNA-binding domain RAM_38985 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_38985 IPR036390 Winged helix DNA-binding domain superfamily RAM_38985 IPR011991 ArsR-like helix-turn-helix domain RAM_38995 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_38995 IPR006313 Deferrochelatase/peroxidase EfeB RAM_38995 IPR011008 Dimeric alpha-beta barrel RAM_38995 IPR006314 Dyp-type peroxidase RAM_39000 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_39000 IPR008475 Bacterial phospholipase C, C-terminal domain RAM_39000 IPR007312 Phosphoesterase RAM_39000 IPR017767 Bacterial phospholipase C, phosphocholine-specific RAM_39000 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RAM_39000 IPR017850 Alkaline-phosphatase-like, core domain superfamily RAM_39015 IPR001789 Signal transduction response regulator, receiver domain RAM_39015 IPR011006 CheY-like superfamily RAM_39020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_39020 IPR003018 GAF domain RAM_39020 IPR029016 GAF-like domain superfamily RAM_39020 IPR003594 Histidine kinase/HSP90-like ATPase RAM_39020 IPR005467 Histidine kinase domain RAM_39020 IPR000014 PAS domain RAM_39020 IPR035965 PAS domain superfamily RAM_39020 IPR013654 PAS fold-2 RAM_39020 IPR016132 Phytochrome chromophore attachment domain RAM_39020 IPR001294 Phytochrome RAM_39020 IPR013515 Phytochrome, central region RAM_39020 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_39020 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_39025 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_39025 IPR011006 CheY-like superfamily RAM_39025 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_39025 IPR001789 Signal transduction response regulator, receiver domain RAM_39025 IPR039420 Transcriptional regulatory protein WalR-like RAM_39075 IPR000073 Alpha/beta hydrolase fold-1 RAM_39075 IPR000639 Epoxide hydrolase-like RAM_39075 IPR029058 Alpha/Beta hydrolase fold RAM_39080 IPR025736 PucR C-terminal helix-turn-helix domain RAM_39080 IPR041522 CdaR, GGDEF-like domain RAM_39080 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_39095 IPR016039 Thiolase-like RAM_39095 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_39095 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_39095 IPR009081 Phosphopantetheine binding ACP domain RAM_39095 IPR036736 ACP-like superfamily RAM_39095 IPR014043 Acyl transferase RAM_39095 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_39095 IPR018201 Beta-ketoacyl synthase, active site RAM_39095 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_39095 IPR006162 Phosphopantetheine attachment site RAM_39095 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_39095 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_39095 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_39095 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_39095 IPR020807 Polyketide synthase, dehydratase domain RAM_39095 IPR013968 Polyketide synthase, ketoreductase domain RAM_39095 IPR036291 NAD(P)-binding domain superfamily RAM_39120 IPR005693 Virulence factor Mce protein RAM_39120 IPR003399 Mce/MlaD RAM_39145 IPR003453 ABC transport permease subunit MlaE, Proteobacteria RAM_39145 IPR030802 ABC transporter permease MalE RAM_39165 IPR003593 AAA+ ATPase domain RAM_39165 IPR003439 ABC transporter-like RAM_39165 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_39165 IPR017871 ABC transporter, conserved site RAM_39165 IPR025302 Domain of unknown function DUF4162 RAM_39165 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_39170 IPR013525 ABC-2 type transporter RAM_39170 IPR000412 ABC-2 transporter RAM_39225 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_39225 IPR009057 Homeobox-like domain superfamily RAM_39225 IPR001647 DNA-binding HTH domain, TetR-type RAM_39225 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_39230 IPR016192 APOBEC/CMP deaminase, zinc-binding RAM_39230 IPR002125 Cytidine and deoxycytidylate deaminase domain RAM_39230 IPR016193 Cytidine deaminase-like RAM_39230 IPR024072 Dihydrofolate reductase-like domain superfamily RAM_39230 IPR004794 Riboflavin biosynthesis protein RibD RAM_39230 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal RAM_39255 IPR011009 Protein kinase-like domain superfamily RAM_39255 IPR002575 Aminoglycoside phosphotransferase RAM_39260 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_39260 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_39260 IPR001647 DNA-binding HTH domain, TetR-type RAM_39260 IPR009057 Homeobox-like domain superfamily RAM_39280 IPR020845 AMP-binding, conserved site RAM_39280 IPR000873 AMP-dependent synthetase/ligase RAM_39280 IPR042099 AMP-dependent synthetase-like superfamily RAM_39280 IPR025110 AMP-binding enzyme, C-terminal domain RAM_39285 IPR041924 Formate dehydrogenase H, N-terminal RAM_39285 IPR041925 Formate dehydrogenase H, molybdopterin-binding domain RAM_39285 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_39285 IPR006656 Molybdopterin oxidoreductase RAM_39285 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RAM_39285 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RAM_39285 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RAM_39285 IPR006478 Formate dehydrogenase, alpha subunit RAM_39285 IPR006657 Molybdopterin dinucleotide-binding domain RAM_39290 IPR036661 Luciferase-like domain superfamily RAM_39290 IPR011251 Luciferase-like domain RAM_39290 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c RAM_39300 IPR036390 Winged helix DNA-binding domain superfamily RAM_39300 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_39300 IPR002577 Helix-turn-helix, HxlR type RAM_39300 IPR011991 ArsR-like helix-turn-helix domain RAM_39310 IPR002818 DJ-1/PfpI RAM_39310 IPR009057 Homeobox-like domain superfamily RAM_39310 IPR018060 DNA binding HTH domain, AraC-type RAM_39310 IPR018062 HTH domain AraC-type, conserved site RAM_39310 IPR029062 Class I glutamine amidotransferase-like RAM_39320 IPR016181 Acyl-CoA N-acyltransferase RAM_39320 IPR000182 GNAT domain RAM_39335 IPR020846 Major facilitator superfamily domain RAM_39335 IPR036259 MFS transporter superfamily RAM_39335 IPR011701 Major facilitator superfamily RAM_39335 IPR004638 Drug resistance transporter EmrB-like RAM_39340 IPR000073 Alpha/beta hydrolase fold-1 RAM_39340 IPR029058 Alpha/Beta hydrolase fold RAM_39380 IPR036390 Winged helix DNA-binding domain superfamily RAM_39380 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain RAM_39380 IPR005119 LysR, substrate-binding RAM_39380 IPR000847 Transcription regulator HTH, LysR RAM_39380 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_39405 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 RAM_39405 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RAM_39415 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RAM_39415 IPR029052 Metallo-dependent phosphatase-like RAM_39425 IPR002589 Macro domain RAM_39430 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RAM_39430 IPR006439 HAD hydrolase, subfamily IA RAM_39430 IPR036412 HAD-like superfamily RAM_39430 IPR023214 HAD superfamily RAM_39430 IPR041492 Haloacid dehalogenase-like hydrolase RAM_39455 IPR004942 Roadblock/LAMTOR2 domain RAM_39470 IPR020845 AMP-binding, conserved site RAM_39470 IPR042099 AMP-dependent synthetase-like superfamily RAM_39470 IPR000873 AMP-dependent synthetase/ligase RAM_39475 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_39475 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_39475 IPR036291 NAD(P)-binding domain superfamily RAM_39485 IPR000160 GGDEF domain RAM_39485 IPR013656 PAS fold-4 RAM_39485 IPR035965 PAS domain superfamily RAM_39485 IPR000700 PAS-associated, C-terminal RAM_39485 IPR029787 Nucleotide cyclase RAM_39485 IPR000014 PAS domain RAM_39500 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain RAM_39500 IPR004474 Cell envelope-related transcriptional attenuator domain RAM_39510 IPR020946 Flavin monooxygenase-like RAM_39510 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_39535 IPR018062 HTH domain AraC-type, conserved site RAM_39535 IPR002818 DJ-1/PfpI RAM_39535 IPR020449 Transcription regulator HTH, AraC- type RAM_39535 IPR018060 DNA binding HTH domain, AraC-type RAM_39535 IPR029062 Class I glutamine amidotransferase-like RAM_39535 IPR009057 Homeobox-like domain superfamily RAM_39540 IPR023210 NADP-dependent oxidoreductase domain RAM_39540 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_39540 IPR020471 Aldo/keto reductase RAM_39545 IPR018060 DNA binding HTH domain, AraC-type RAM_39545 IPR009594 Transcription regulator HTH, AraC, N-terminal RAM_39545 IPR009057 Homeobox-like domain superfamily RAM_39565 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RAM_39565 IPR013766 Thioredoxin domain RAM_39565 IPR024706 Peroxiredoxin, AhpC-type RAM_39565 IPR036249 Thioredoxin-like superfamily RAM_39575 IPR002637 Ham1-like protein RAM_39575 IPR029001 Inosine triphosphate pyrophosphatase-like RAM_39575 IPR020922 dITP/XTP pyrophosphatase RAM_39580 IPR027408 PNPase/RNase PH domain superfamily RAM_39580 IPR018336 Ribonuclease PH, conserved site RAM_39580 IPR002381 Ribonuclease PH, bacterial-type RAM_39580 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_39580 IPR036345 Exoribonuclease, PH domain 2 superfamily RAM_39580 IPR015847 Exoribonuclease, phosphorolytic domain 2 RAM_39580 IPR001247 Exoribonuclease, phosphorolytic domain 1 RAM_39585 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_39585 IPR001279 Metallo-beta-lactamase RAM_39590 IPR015942 Asp/Glu/hydantoin racemase RAM_39590 IPR004391 Glutamate racemase RAM_39590 IPR033134 Asp/Glu racemase, active site 2 RAM_39590 IPR001920 Asp/Glu racemase RAM_39590 IPR018187 Asp/Glu racemase, active site 1 RAM_39595 IPR022764 Peptidase S54, rhomboid domain RAM_39595 IPR035952 Rhomboid-like superfamily RAM_39605 IPR018187 Asp/Glu racemase, active site 1 RAM_39605 IPR001920 Asp/Glu racemase RAM_39605 IPR015942 Asp/Glu/hydantoin racemase RAM_39605 IPR004380 Aspartate racemase RAM_39605 IPR033134 Asp/Glu racemase, active site 2 RAM_39610 IPR022877 Protein of unknown funcion UPF0173 RAM_39610 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_39610 IPR001279 Metallo-beta-lactamase RAM_39620 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_39620 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RAM_39620 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_39620 IPR005856 Cysteine synthase RAM_39625 IPR012675 Beta-grasp domain superfamily RAM_39625 IPR003749 Sulfur carrier ThiS/MoaD-like RAM_39625 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RAM_39630 IPR028090 JAB domain, prokaryotic RAM_39630 IPR037518 MPN domain RAM_39630 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain RAM_39640 IPR005321 Peptidase S58, DmpA RAM_39640 IPR016117 ArgJ-like domain superfamily RAM_39645 IPR018561 Domain of unknown function DUF2017 RAM_39650 IPR003769 Adaptor protein ClpS, core RAM_39650 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RAM_39650 IPR022935 ATP-dependent Clp protease adaptor protein ClpS RAM_39655 IPR007229 Nicotinate phosphoribosyltransferase family RAM_39655 IPR006405 Nicotinate phosphoribosyltransferase pncB-type RAM_39655 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal RAM_39655 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal RAM_39655 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain RAM_39655 IPR013785 Aldolase-type TIM barrel RAM_39660 IPR000868 Isochorismatase-like RAM_39660 IPR036380 Isochorismatase-like superfamily RAM_39665 IPR013785 Aldolase-type TIM barrel RAM_39665 IPR000887 KDPG/KHG aldolase RAM_39675 IPR003784 BioY protein RAM_39680 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type RAM_39680 IPR006555 ATP-dependent helicase, C-terminal RAM_39680 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_39680 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_39705 IPR036412 HAD-like superfamily RAM_39705 IPR002912 ACT domain RAM_39705 IPR023214 HAD superfamily RAM_39705 IPR023190 Phosphoserine phosphatase, domain 2 RAM_39710 IPR023616 Cytochrome c oxidase-like, subunit I domain RAM_39710 IPR036927 Cytochrome c oxidase-like, subunit I superfamily RAM_39710 IPR000883 Cytochrome c oxidase subunit I RAM_39710 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RAM_39710 IPR014241 Cytochrome c oxidase, subunit I bacterial type RAM_39720 IPR000073 Alpha/beta hydrolase fold-1 RAM_39720 IPR029058 Alpha/Beta hydrolase fold RAM_39720 IPR019913 Pyrimidine utilisation protein RutD RAM_39725 IPR000182 GNAT domain RAM_39725 IPR016181 Acyl-CoA N-acyltransferase RAM_39735 IPR002514 Transposase IS3/IS911family RAM_39735 IPR009057 Homeobox-like domain superfamily RAM_39740 IPR025948 HTH-like domain RAM_39740 IPR036397 Ribonuclease H superfamily RAM_39740 IPR012337 Ribonuclease H-like superfamily RAM_39740 IPR001584 Integrase, catalytic core RAM_39755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_39755 IPR015424 Pyridoxal phosphate-dependent transferase RAM_39755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_39755 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RAM_39760 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RAM_39760 IPR019888 Transcription regulator AsnC-type RAM_39760 IPR000485 AsnC-type HTH domain RAM_39760 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RAM_39760 IPR036390 Winged helix DNA-binding domain superfamily RAM_39760 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_39760 IPR011008 Dimeric alpha-beta barrel RAM_39770 IPR000485 AsnC-type HTH domain RAM_39770 IPR011008 Dimeric alpha-beta barrel RAM_39770 IPR036390 Winged helix DNA-binding domain superfamily RAM_39770 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_39770 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RAM_39770 IPR019888 Transcription regulator AsnC-type RAM_39775 IPR036661 Luciferase-like domain superfamily RAM_39775 IPR011251 Luciferase-like domain RAM_39775 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted RAM_39785 IPR041369 TrmO, C-terminal RAM_39785 IPR023370 TrmO-like, N-terminal domain RAM_39785 IPR023368 Uncharacterised protein family UPF0066, conserved site RAM_39785 IPR036414 YaeB, N-terminal domain superfamily RAM_39785 IPR040372 YaeB-like RAM_39785 IPR036413 YaeB-like superfamily RAM_39790 IPR036291 NAD(P)-binding domain superfamily RAM_39790 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_39790 IPR022694 3-hydroxyacyl-CoA dehydrogenase RAM_39790 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_39790 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_39790 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_39795 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain RAM_39795 IPR035895 HPr-like superfamily RAM_39795 IPR008279 PEP-utilising enzyme, mobile domain RAM_39795 IPR008731 Phosphotransferase system, enzyme I N-terminal RAM_39795 IPR004701 Phosphotransferase system, mannose-type IIA component RAM_39795 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily RAM_39795 IPR036637 Phosphohistidine domain superfamily RAM_39795 IPR000032 Phosphocarrier protein HPr-like RAM_39795 IPR036618 PtsI, HPr-binding domain superfamily RAM_39800 IPR036117 DhaL domain superfamily RAM_39800 IPR004007 DhaL domain RAM_39800 IPR012737 Dihydroxyacetone kinase, subunit L RAM_39805 IPR004006 DhaK domain RAM_39805 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 RAM_39820 IPR001734 Sodium/solute symporter RAM_39820 IPR038377 Sodium/glucose symporter superfamily RAM_39820 IPR018212 Sodium/solute symporter, conserved site RAM_39835 IPR002793 Endonuclease NucS RAM_39835 IPR011856 tRNA endonuclease-like domain superfamily RAM_39840 IPR015797 NUDIX hydrolase-like domain superfamily RAM_39840 IPR022927 RNA pyrophosphohydrolase RppH RAM_39840 IPR000086 NUDIX hydrolase domain RAM_39840 IPR020476 NUDIX hydrolase RAM_39840 IPR020084 NUDIX hydrolase, conserved site RAM_39855 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_39855 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB RAM_39855 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_39855 IPR001753 Enoyl-CoA hydratase/isomerase RAM_39855 IPR029045 ClpP/crotonase-like domain superfamily RAM_39860 IPR020449 Transcription regulator HTH, AraC- type RAM_39860 IPR009057 Homeobox-like domain superfamily RAM_39860 IPR029062 Class I glutamine amidotransferase-like RAM_39860 IPR018062 HTH domain AraC-type, conserved site RAM_39860 IPR018060 DNA binding HTH domain, AraC-type RAM_39860 IPR002818 DJ-1/PfpI RAM_39865 IPR000868 Isochorismatase-like RAM_39865 IPR036380 Isochorismatase-like superfamily RAM_39885 IPR004778 Homoserine/Threonine efflux protein RAM_39885 IPR001123 Amino acid exporter protein, LeuE-type RAM_39890 IPR001123 Amino acid exporter protein, LeuE-type RAM_39890 IPR004778 Homoserine/Threonine efflux protein RAM_39900 IPR036291 NAD(P)-binding domain superfamily RAM_39900 IPR001509 NAD-dependent epimerase/dehydratase RAM_39905 IPR032710 NTF2-like domain superfamily RAM_39905 IPR037401 SnoaL-like domain RAM_39910 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_39910 IPR011075 Tetracyclin repressor-like, C-terminal domain RAM_39910 IPR009057 Homeobox-like domain superfamily RAM_39910 IPR001647 DNA-binding HTH domain, TetR-type RAM_39915 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RAM_39915 IPR036968 Enolpyruvate transferase domain superfamily RAM_39915 IPR020683 Ankyrin repeat-containing domain RAM_39915 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RAM_39915 IPR001986 Enolpyruvate transferase domain RAM_39920 IPR036451 Cobalamin adenosyltransferase-like superfamily RAM_39920 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type RAM_39920 IPR016030 Cobalamin adenosyltransferase-like RAM_39925 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase RAM_39925 IPR001986 Enolpyruvate transferase domain RAM_39925 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site RAM_39925 IPR036968 Enolpyruvate transferase domain superfamily RAM_39925 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RAM_39930 IPR019675 Protein of unknown function DUF2550 RAM_39935 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal RAM_39935 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal RAM_39935 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit RAM_39940 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_39940 IPR005722 ATP synthase, F1 complex, beta subunit RAM_39940 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal RAM_39940 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RAM_39940 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RAM_39940 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain RAM_39940 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily RAM_39940 IPR003593 AAA+ ATPase domain RAM_39945 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily RAM_39945 IPR000131 ATP synthase, F1 complex, gamma subunit RAM_39950 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily RAM_39950 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain RAM_39950 IPR005294 ATP synthase, F1 complex, alpha subunit RAM_39950 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily RAM_39950 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RAM_39950 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain RAM_39950 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily RAM_39950 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RAM_39950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_39950 IPR000793 ATP synthase, alpha subunit, C-terminal RAM_39955 IPR000711 ATPase, OSCP/delta subunit RAM_39955 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily RAM_39960 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily RAM_39960 IPR005864 ATP synthase, F0 complex, subunit b, bacterial RAM_39960 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast RAM_39965 IPR000454 ATP synthase, F0 complex, subunit C RAM_39965 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site RAM_39965 IPR038662 F1F0 ATP synthase subunit C superfamily RAM_39965 IPR002379 V-ATPase proteolipid subunit C-like domain RAM_39965 IPR035921 F/V-ATP synthase subunit C superfamily RAM_39970 IPR000568 ATP synthase, F0 complex, subunit A RAM_39970 IPR023011 ATP synthase, F0 complex, subunit A, active site RAM_39970 IPR035908 ATP synthase, F0 complex, subunit A superfamily RAM_39980 IPR000715 Glycosyl transferase, family 4 RAM_39985 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RAM_39985 IPR006070 YrdC-like domain RAM_39995 IPR040758 Release factor glutamine methyltransferase, N-terminal domain RAM_39995 IPR004556 Methyltransferase HemK-like RAM_39995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_39995 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RAM_39995 IPR007848 Methyltransferase small domain RAM_39995 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RAM_40000 IPR029044 Nucleotide-diphospho-sugar transferases RAM_40000 IPR001173 Glycosyltransferase 2-like RAM_40015 IPR005139 Peptide chain release factor RAM_40015 IPR000352 Peptide chain release factor class I RAM_40015 IPR004373 Peptide chain release factor 1 RAM_40020 IPR042105 Ribosomal protein L31 superfamily RAM_40020 IPR034704 L28p-like RAM_40020 IPR002150 Ribosomal protein L31 RAM_40020 IPR027491 Ribosomal protein L31 type A RAM_40025 IPR003593 AAA+ ATPase domain RAM_40025 IPR011113 Rho termination factor, RNA-binding domain RAM_40025 IPR012340 Nucleic acid-binding, OB-fold RAM_40025 IPR004665 Transcription termination factor Rho RAM_40025 IPR041703 Transcription termination factor Rho, ATP binding domain RAM_40025 IPR011112 Rho termination factor, N-terminal RAM_40025 IPR036269 Rho termination factor, N-terminal domain superfamily RAM_40025 IPR011129 Cold shock domain RAM_40025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_40025 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RAM_40030 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_40030 IPR006203 GHMP kinase, ATP-binding, conserved site RAM_40030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_40030 IPR000870 Homoserine kinase RAM_40030 IPR036554 GHMP kinase, C-terminal domain superfamily RAM_40030 IPR006204 GHMP kinase N-terminal domain RAM_40035 IPR026260 Threonine synthase, bacterial/archaeal RAM_40035 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RAM_40035 IPR004450 Threonine synthase-like RAM_40035 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_40035 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_40040 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RAM_40040 IPR016204 Homoserine dehydrogenase RAM_40040 IPR001342 Homoserine dehydrogenase, catalytic RAM_40040 IPR019811 Homoserine dehydrogenase, conserved site RAM_40040 IPR036291 NAD(P)-binding domain superfamily RAM_40040 IPR002912 ACT domain RAM_40045 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site RAM_40045 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RAM_40045 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RAM_40045 IPR029066 PLP-binding barrel RAM_40045 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RAM_40045 IPR002986 Diaminopimelate decarboxylase, LysA RAM_40045 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RAM_40045 IPR000183 Ornithine/DAP/Arg decarboxylase RAM_40050 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RAM_40050 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RAM_40050 IPR005148 Arginyl tRNA synthetase N-terminal domain RAM_40050 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_40050 IPR035684 Arginyl-tRNA synthetase, catalytic core domain RAM_40050 IPR008909 DALR anticodon binding RAM_40050 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily RAM_40050 IPR001278 Arginine-tRNA ligase RAM_40070 IPR027469 Cation efflux transmembrane domain superfamily RAM_40070 IPR036837 Cation efflux protein, cytoplasmic domain superfamily RAM_40070 IPR002524 Cation efflux protein RAM_40080 IPR036291 NAD(P)-binding domain superfamily RAM_40080 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_40080 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_40085 IPR029058 Alpha/Beta hydrolase fold RAM_40085 IPR010497 Epoxide hydrolase, N-terminal RAM_40085 IPR016292 Epoxide hydrolase RAM_40085 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_40085 IPR000639 Epoxide hydrolase-like RAM_40095 IPR013154 Alcohol dehydrogenase, N-terminal RAM_40095 IPR011032 GroES-like superfamily RAM_40095 IPR013149 Alcohol dehydrogenase, C-terminal RAM_40095 IPR036291 NAD(P)-binding domain superfamily RAM_40095 IPR020843 Polyketide synthase, enoylreductase domain RAM_40095 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_40105 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain RAM_40105 IPR017520 Conserved hypothetical protein CHP03086 RAM_40105 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type RAM_40105 IPR034660 DinB/YfiT-like putative metalloenzymes RAM_40170 IPR030048 Survival protein SurE RAM_40170 IPR002828 Survival protein SurE-like phosphatase/nucleotidase RAM_40170 IPR036523 SurE-like phosphatase/nucleotidase superfamily RAM_40185 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_40185 IPR016032 Signal transduction response regulator, C-terminal effector RAM_40185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_40185 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_40185 IPR002182 NB-ARC RAM_40185 IPR005158 Bacterial transcriptional activator domain RAM_40185 IPR019734 Tetratricopeptide repeat RAM_40185 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_40185 IPR013026 Tetratricopeptide repeat-containing domain RAM_40190 IPR008254 Flavodoxin/nitric oxide synthase RAM_40190 IPR017938 Riboflavin synthase-like beta-barrel RAM_40190 IPR001433 Oxidoreductase FAD/NAD(P)-binding RAM_40190 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily RAM_40190 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_40190 IPR029039 Flavoprotein-like superfamily RAM_40190 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RAM_40190 IPR001094 Flavodoxin-like RAM_40190 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_40190 IPR036396 Cytochrome P450 superfamily RAM_40190 IPR017972 Cytochrome P450, conserved site RAM_40190 IPR001128 Cytochrome P450 RAM_40190 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding RAM_40190 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase RAM_40200 IPR000743 Glycoside hydrolase, family 28 RAM_40200 IPR013783 Immunoglobulin-like fold RAM_40200 IPR036116 Fibronectin type III superfamily RAM_40200 IPR003961 Fibronectin type III RAM_40200 IPR011050 Pectin lyase fold/virulence factor RAM_40200 IPR012334 Pectin lyase fold RAM_40205 IPR003610 Carbohydrate-binding module family 5/12 RAM_40205 IPR013783 Immunoglobulin-like fold RAM_40205 IPR017853 Glycoside hydrolase superfamily RAM_40205 IPR001223 Glycoside hydrolase family 18, catalytic domain RAM_40205 IPR036116 Fibronectin type III superfamily RAM_40205 IPR001579 Glycoside hydrolase, chitinase active site RAM_40205 IPR029070 Chitinase insertion domain superfamily RAM_40205 IPR036573 Carbohydrate-binding module superfamily 5/12 RAM_40205 IPR011583 Chitinase II RAM_40205 IPR003961 Fibronectin type III RAM_40210 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_40210 IPR002241 Glycoside hydrolase, family 27 RAM_40210 IPR013785 Aldolase-type TIM barrel RAM_40210 IPR013780 Glycosyl hydrolase, all-beta RAM_40210 IPR017853 Glycoside hydrolase superfamily RAM_40210 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain RAM_40215 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RAM_40215 IPR035992 Ricin B-like lectins RAM_40215 IPR000772 Ricin B, lectin domain RAM_40215 IPR005193 Glycoside hydrolase, family 62, arabinosidase RAM_40220 IPR001547 Glycoside hydrolase, family 5 RAM_40220 IPR018087 Glycoside hydrolase, family 5, conserved site RAM_40220 IPR017853 Glycoside hydrolase superfamily RAM_40220 IPR036966 Carbohydrate-binding module 3 superfamily RAM_40220 IPR013780 Glycosyl hydrolase, all-beta RAM_40220 IPR024745 Glycoside hydrolase, family 44 RAM_40220 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_40220 IPR001956 Carbohydrate-binding module 3 RAM_40225 IPR023945 N-acetylmannosamine kinase, bacterial RAM_40225 IPR000600 ROK family RAM_40235 IPR035992 Ricin B-like lectins RAM_40235 IPR000772 Ricin B, lectin domain RAM_40235 IPR005193 Glycoside hydrolase, family 62, arabinosidase RAM_40235 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RAM_40240 IPR035992 Ricin B-like lectins RAM_40240 IPR000772 Ricin B, lectin domain RAM_40240 IPR017853 Glycoside hydrolase superfamily RAM_40240 IPR001000 Glycoside hydrolase family 10 domain RAM_40240 IPR031158 Glycosyl hydrolases family 10, active site RAM_40260 IPR001547 Glycoside hydrolase, family 5 RAM_40260 IPR024745 Glycoside hydrolase, family 44 RAM_40260 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_40260 IPR036966 Carbohydrate-binding module 3 superfamily RAM_40260 IPR001956 Carbohydrate-binding module 3 RAM_40260 IPR018087 Glycoside hydrolase, family 5, conserved site RAM_40260 IPR013780 Glycosyl hydrolase, all-beta RAM_40260 IPR017853 Glycoside hydrolase superfamily RAM_40280 IPR011050 Pectin lyase fold/virulence factor RAM_40280 IPR039448 Right handed beta helix domain RAM_40280 IPR012334 Pectin lyase fold RAM_40295 IPR002938 FAD-binding domain RAM_40295 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_40305 IPR032806 H repeat-associated protein, N-terminal RAM_40305 IPR002559 Transposase, IS4-like RAM_40360 IPR005814 Aminotransferase class-III RAM_40360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_40360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_40360 IPR015424 Pyridoxal phosphate-dependent transferase RAM_40360 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA RAM_40365 IPR023606 CoA-transferase family III domain superfamily RAM_40365 IPR003673 CoA-transferase family III RAM_40385 IPR036291 NAD(P)-binding domain superfamily RAM_40385 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_40385 IPR023985 Mycofactocin-dependent oxidoreductase RAM_40390 IPR003692 Hydantoinase B/oxoprolinase RAM_40395 IPR008040 Hydantoinaseoxoprolinase, N-terminal RAM_40395 IPR002821 Hydantoinase A/oxoprolinase RAM_40400 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_40400 IPR000399 TPP-binding enzyme, conserved site RAM_40400 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_40400 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_40400 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_40400 IPR029061 Thiamin diphosphate-binding fold RAM_40410 IPR004255 O-acyltransferase, WSD1, N-terminal RAM_40410 IPR014292 Acyltransferase, WS/DGAT/MGAT RAM_40410 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_40410 IPR009721 O-acyltransferase WSD1, C-terminal RAM_40415 IPR004305 Thiaminase-2/PQQC RAM_40415 IPR016084 Haem oxygenase-like, multi-helical RAM_40415 IPR011845 Coenzyme PQQ biosynthesis protein C RAM_40415 IPR039068 Pyrroloquinoline-quinone synthase-like RAM_40420 IPR022479 Coenzyme PQQ synthesis D, bacteria RAM_40420 IPR041881 Coenzyme PQQ synthesis protein D superfamily RAM_40420 IPR008792 Coenzyme PQQ synthesis protein D RAM_40425 IPR007197 Radical SAM RAM_40425 IPR023885 4Fe4S-binding SPASM domain RAM_40425 IPR017200 Coenzyme PQQ synthesis protein E RAM_40425 IPR006638 Elp3/MiaB/NifB RAM_40425 IPR013785 Aldolase-type TIM barrel RAM_40425 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria RAM_40430 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_40430 IPR011842 Coenzyme PQQ biosynthesis protein B RAM_40430 IPR001279 Metallo-beta-lactamase RAM_40445 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RAM_40445 IPR023631 Amidase signature domain RAM_40445 IPR000120 Amidase RAM_40445 IPR036928 Amidase signature (AS) superfamily RAM_40450 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RAM_40450 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RAM_40450 IPR036291 NAD(P)-binding domain superfamily RAM_40475 IPR024084 Isopropylmalate dehydrogenase-like domain RAM_40475 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RAM_40475 IPR011829 Tartrate dehydrogenase RAM_40480 IPR016161 Aldehyde/histidinol dehydrogenase RAM_40480 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_40480 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_40480 IPR015590 Aldehyde dehydrogenase domain RAM_40480 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_40495 IPR023210 NADP-dependent oxidoreductase domain RAM_40495 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_40495 IPR020471 Aldo/keto reductase RAM_40510 IPR016166 FAD-binding domain, PCMH-type RAM_40510 IPR006094 FAD linked oxidase, N-terminal RAM_40510 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RAM_40510 IPR036318 FAD-binding, type PCMH-like superfamily RAM_40510 IPR016164 FAD-linked oxidase-like, C-terminal RAM_40510 IPR004113 FAD-linked oxidase, C-terminal RAM_40515 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_40515 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_40515 IPR029061 Thiamin diphosphate-binding fold RAM_40530 IPR036259 MFS transporter superfamily RAM_40530 IPR005829 Sugar transporter, conserved site RAM_40530 IPR011701 Major facilitator superfamily RAM_40530 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RAM_40530 IPR036390 Winged helix DNA-binding domain superfamily RAM_40530 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_40530 IPR020846 Major facilitator superfamily domain RAM_40540 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_40540 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_40545 IPR016032 Signal transduction response regulator, C-terminal effector RAM_40545 IPR001789 Signal transduction response regulator, receiver domain RAM_40545 IPR000792 Transcription regulator LuxR, C-terminal RAM_40545 IPR011006 CheY-like superfamily RAM_40550 IPR000731 Sterol-sensing domain RAM_40550 IPR004869 Membrane transport protein MMPL domain RAM_40555 IPR008928 Six-hairpin glycosidase superfamily RAM_40555 IPR012939 Glycosyl hydrolase family 92 RAM_40555 IPR041371 Glycosyl hydrolase family 92 N-terminal domain RAM_40555 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_40555 IPR005887 Alpha-1,2-mannosidase, putative RAM_40560 IPR012802 Fatty oxidation complex, alpha subunit FadJ RAM_40560 IPR001753 Enoyl-CoA hydratase/isomerase RAM_40560 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_40560 IPR036291 NAD(P)-binding domain superfamily RAM_40560 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_40560 IPR029045 ClpP/crotonase-like domain superfamily RAM_40560 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_40560 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_40565 IPR016039 Thiolase-like RAM_40565 IPR020615 Thiolase, acyl-enzyme intermediate active site RAM_40565 IPR020610 Thiolase, active site RAM_40565 IPR020617 Thiolase, C-terminal RAM_40565 IPR002155 Thiolase RAM_40565 IPR020613 Thiolase, conserved site RAM_40565 IPR020616 Thiolase, N-terminal RAM_40570 IPR009057 Homeobox-like domain superfamily RAM_40570 IPR001647 DNA-binding HTH domain, TetR-type RAM_40605 IPR010640 Low temperature requirement A RAM_40610 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_40610 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_40610 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_40610 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_40610 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_40610 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_40610 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_40615 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_40615 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_40615 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_40615 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_40615 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_40615 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_40615 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_40665 IPR020084 NUDIX hydrolase, conserved site RAM_40665 IPR036412 HAD-like superfamily RAM_40665 IPR000086 NUDIX hydrolase domain RAM_40665 IPR015797 NUDIX hydrolase-like domain superfamily RAM_40665 IPR020476 NUDIX hydrolase RAM_40665 IPR023214 HAD superfamily RAM_40665 IPR006357 HAD-superfamily hydrolase, subfamily IIA RAM_40680 IPR036291 NAD(P)-binding domain superfamily RAM_40680 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_40680 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_40690 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RAM_40690 IPR001714 Peptidase M24, methionine aminopeptidase RAM_40690 IPR000994 Peptidase M24 RAM_40690 IPR036005 Creatinase/aminopeptidase-like RAM_40710 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_40710 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_40710 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_40710 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_40710 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_40710 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_40710 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_40715 IPR005481 Biotin carboxylase-like, N-terminal domain RAM_40715 IPR011761 ATP-grasp fold RAM_40715 IPR011764 Biotin carboxylation domain RAM_40715 IPR001882 Biotin-binding site RAM_40715 IPR000089 Biotin/lipoyl attachment RAM_40715 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RAM_40715 IPR011054 Rudiment single hybrid motif RAM_40715 IPR016185 Pre-ATP-grasp domain superfamily RAM_40715 IPR011053 Single hybrid motif RAM_40715 IPR005482 Biotin carboxylase, C-terminal RAM_40720 IPR034733 Acetyl-CoA carboxylase RAM_40720 IPR029045 ClpP/crotonase-like domain superfamily RAM_40720 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RAM_40720 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RAM_40725 IPR037460 Streptomyces scabies esterase-like RAM_40725 IPR036514 SGNH hydrolase superfamily RAM_40725 IPR013830 SGNH hydrolase-type esterase domain RAM_40735 IPR001647 DNA-binding HTH domain, TetR-type RAM_40735 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_40735 IPR009057 Homeobox-like domain superfamily RAM_40750 IPR029058 Alpha/Beta hydrolase fold RAM_40750 IPR000073 Alpha/beta hydrolase fold-1 RAM_40750 IPR008220 Homoserine/serine acetyltransferase MetX-like RAM_40755 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RAM_40755 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase RAM_40755 IPR015424 Pyridoxal phosphate-dependent transferase RAM_40755 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_40755 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_40760 IPR002938 FAD-binding domain RAM_40760 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_40765 IPR037523 Vicinal oxygen chelate (VOC) domain RAM_40765 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RAM_40765 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RAM_40785 IPR025714 Methyltransferase domain RAM_40785 IPR026669 Arsenite methyltransferase-like RAM_40785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_40790 IPR025736 PucR C-terminal helix-turn-helix domain RAM_40790 IPR041522 CdaR, GGDEF-like domain RAM_40790 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal RAM_40790 IPR029016 GAF-like domain superfamily RAM_40790 IPR042070 PucR C-terminal helix-turn-helix domain superfamily RAM_40800 IPR020843 Polyketide synthase, enoylreductase domain RAM_40800 IPR036291 NAD(P)-binding domain superfamily RAM_40800 IPR011032 GroES-like superfamily RAM_40800 IPR013154 Alcohol dehydrogenase, N-terminal RAM_40800 IPR013149 Alcohol dehydrogenase, C-terminal RAM_40805 IPR008141 Alanine dehydrogenase RAM_40805 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RAM_40805 IPR036291 NAD(P)-binding domain superfamily RAM_40805 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 RAM_40805 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RAM_40805 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RAM_40815 IPR032404 Two-component sensor protein CpxA, periplasmic domain RAM_40815 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_40815 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_40815 IPR005467 Histidine kinase domain RAM_40815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_40815 IPR038515 CpxA, periplasmic domain superfamily RAM_40815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_40815 IPR003594 Histidine kinase/HSP90-like ATPase RAM_40815 IPR003660 HAMP domain RAM_40825 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_40825 IPR039420 Transcriptional regulatory protein WalR-like RAM_40825 IPR001789 Signal transduction response regulator, receiver domain RAM_40825 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_40825 IPR011006 CheY-like superfamily RAM_40830 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_40830 IPR017871 ABC transporter, conserved site RAM_40830 IPR003439 ABC transporter-like RAM_40830 IPR003593 AAA+ ATPase domain RAM_40840 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_40840 IPR011527 ABC transporter type 1, transmembrane domain RAM_40840 IPR017871 ABC transporter, conserved site RAM_40840 IPR039421 Type I protein exporter RAM_40840 IPR003439 ABC transporter-like RAM_40840 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_40840 IPR003593 AAA+ ATPase domain RAM_40855 IPR011603 2-oxoglutarate dehydrogenase E1 component RAM_40855 IPR029061 Thiamin diphosphate-binding fold RAM_40855 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RAM_40855 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily RAM_40855 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain RAM_40855 IPR005475 Transketolase-like, pyrimidine-binding domain RAM_40855 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal RAM_40855 IPR001017 Dehydrogenase, E1 component RAM_40855 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_40860 IPR029058 Alpha/Beta hydrolase fold RAM_40860 IPR000073 Alpha/beta hydrolase fold-1 RAM_40865 IPR029044 Nucleotide-diphospho-sugar transferases RAM_40865 IPR001173 Glycosyltransferase 2-like RAM_40865 IPR027791 Galactosyltransferase, C-terminal RAM_40870 IPR036259 MFS transporter superfamily RAM_40870 IPR020846 Major facilitator superfamily domain RAM_40870 IPR011701 Major facilitator superfamily RAM_40880 IPR011251 Luciferase-like domain RAM_40880 IPR036661 Luciferase-like domain superfamily RAM_40880 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related RAM_40880 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase RAM_40895 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_40895 IPR035906 MetI-like superfamily RAM_40900 IPR035906 MetI-like superfamily RAM_40900 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_40905 IPR005892 Glycine betaine transport ATP-binding subunit RAM_40905 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_40905 IPR017871 ABC transporter, conserved site RAM_40905 IPR003593 AAA+ ATPase domain RAM_40905 IPR003439 ABC transporter-like RAM_40905 IPR000644 CBS domain RAM_40915 IPR002912 ACT domain RAM_40915 IPR037062 Malic enzyme, N-terminal domain superfamily RAM_40915 IPR012302 Malic enzyme, NAD-binding RAM_40915 IPR001891 Malic oxidoreductase RAM_40915 IPR036291 NAD(P)-binding domain superfamily RAM_40915 IPR012301 Malic enzyme, N-terminal domain RAM_40915 IPR015884 Malic enzyme, conserved site RAM_40920 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related RAM_40920 IPR011051 RmlC-like cupin domain superfamily RAM_40920 IPR014710 RmlC-like jelly roll fold RAM_40930 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_40930 IPR036390 Winged helix DNA-binding domain superfamily RAM_40930 IPR000835 MarR-type HTH domain RAM_40945 IPR013078 Histidine phosphatase superfamily, clade-1 RAM_40945 IPR029033 Histidine phosphatase superfamily RAM_40960 IPR005218 Diacylglycerol/lipid kinase RAM_40960 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RAM_40960 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RAM_40960 IPR001206 Diacylglycerol kinase, catalytic domain RAM_40965 IPR034768 WhiB-like iron-sulfur binding domain RAM_40965 IPR003482 Transcription factor WhiB RAM_40970 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_40970 IPR035965 PAS domain superfamily RAM_40970 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily RAM_40970 IPR003594 Histidine kinase/HSP90-like ATPase RAM_40970 IPR022066 Signal transduction histidine kinase, N-terminal RAM_40970 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain RAM_40970 IPR005467 Histidine kinase domain RAM_40975 IPR027383 Putative zinc-finger RAM_40975 IPR014295 Anti-sigma factor RAM_40975 IPR024020 Anti sigma-R factor, mycothiol system,RsrA RAM_40980 IPR007627 RNA polymerase sigma-70 region 2 RAM_40980 IPR039425 RNA polymerase sigma-70 like RAM_40980 IPR014284 RNA polymerase sigma-70 like domain RAM_40980 IPR014293 RNA polymerase sigma-70, actinobacteria RAM_40980 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_40980 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_40980 IPR013325 RNA polymerase sigma factor, region 2 RAM_40980 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_40980 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_40985 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RAM_40985 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily RAM_40985 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RAM_40995 IPR003738 SOS response associated peptidase (SRAP) RAM_40995 IPR036590 SOS response associated peptidase-like RAM_41000 IPR010914 RsgA GTPase domain RAM_41000 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain RAM_41000 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41000 IPR004881 Ribosome biogenesis GTPase RsgA RAM_41000 IPR012340 Nucleic acid-binding, OB-fold RAM_41020 IPR004255 O-acyltransferase, WSD1, N-terminal RAM_41025 IPR029064 50S ribosomal protein L30e-like RAM_41025 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RAM_41025 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RAM_41025 IPR001537 tRNA/rRNA methyltransferase, SpoU type RAM_41025 IPR004441 RNA methyltransferase TrmH family RAM_41025 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB RAM_41025 IPR029028 Alpha/beta knot methyltransferases RAM_41030 IPR023214 HAD superfamily RAM_41030 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB RAM_41030 IPR041492 Haloacid dehalogenase-like hydrolase RAM_41030 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RAM_41030 IPR036412 HAD-like superfamily RAM_41030 IPR006439 HAD hydrolase, subfamily IA RAM_41040 IPR002397 Cytochrome P450, B-class RAM_41040 IPR036396 Cytochrome P450 superfamily RAM_41040 IPR017972 Cytochrome P450, conserved site RAM_41040 IPR001128 Cytochrome P450 RAM_41045 IPR020937 SecA conserved site RAM_41045 IPR011116 SecA Wing/Scaffold RAM_41045 IPR000185 Protein translocase subunit SecA RAM_41045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41045 IPR036266 SecA, Wing/Scaffold superfamily RAM_41045 IPR036670 SecA, preprotein cross-linking domain superfamily RAM_41045 IPR014018 SecA motor DEAD RAM_41045 IPR011115 SecA DEAD-like, N-terminal RAM_41045 IPR011130 SecA, preprotein cross-linking domain RAM_41050 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal RAM_41050 IPR036567 Ribosome hibernation promotion factor-like RAM_41050 IPR003489 Ribosome hibernation promoting factor/RaiA RAM_41050 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily RAM_41050 IPR034694 Ribosome hibernation promoting factor, long/plastid RAM_41060 IPR019606 GerMN domain RAM_41060 IPR023959 Lipoprotein LpqB RAM_41060 IPR018910 Lipoprotein LpqB, beta-propeller domain, C-terminal RAM_41060 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like RAM_41065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_41065 IPR005467 Histidine kinase domain RAM_41065 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_41065 IPR003660 HAMP domain RAM_41065 IPR003594 Histidine kinase/HSP90-like ATPase RAM_41065 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_41065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_41070 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_41070 IPR001789 Signal transduction response regulator, receiver domain RAM_41070 IPR039420 Transcriptional regulatory protein WalR-like RAM_41070 IPR011006 CheY-like superfamily RAM_41070 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_41075 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RAM_41075 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RAM_41075 IPR023739 3-phenylpropionate/cinnamic acid dioxygenase, ferredoxin subunit RAM_41080 IPR014757 Transcription regulator IclR, C-terminal RAM_41080 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_41080 IPR036390 Winged helix DNA-binding domain superfamily RAM_41080 IPR029016 GAF-like domain superfamily RAM_41080 IPR005471 Transcription regulator IclR, N-terminal RAM_41095 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RAM_41095 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RAM_41095 IPR032503 FAD dependent oxidoreductase, central domain RAM_41095 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal RAM_41095 IPR006222 Aminomethyltransferase, folate-binding domain RAM_41095 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_41095 IPR006076 FAD dependent oxidoreductase RAM_41100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41100 IPR039430 Thymidylate kinase-like domain RAM_41100 IPR018094 Thymidylate kinase RAM_41100 IPR018095 Thymidylate kinase, conserved site RAM_41135 IPR036291 NAD(P)-binding domain superfamily RAM_41135 IPR042172 Adenosylhomocysteinase-like superfamily RAM_41135 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain RAM_41135 IPR000043 Adenosylhomocysteinase-like RAM_41135 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site RAM_41150 IPR002293 Amino acid/polyamine transporter I RAM_41150 IPR004758 Amino acid transporter RAM_41160 IPR005158 Bacterial transcriptional activator domain RAM_41160 IPR019734 Tetratricopeptide repeat RAM_41160 IPR016032 Signal transduction response regulator, C-terminal effector RAM_41160 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_41160 IPR013026 Tetratricopeptide repeat-containing domain RAM_41160 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_41160 IPR002182 NB-ARC RAM_41160 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41160 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_41165 IPR001250 Mannose-6-phosphate isomerase, type I RAM_41165 IPR011051 RmlC-like cupin domain superfamily RAM_41165 IPR016305 Mannose-6-phosphate isomerase RAM_41165 IPR018050 Phosphomannose isomerase, type I, conserved site RAM_41165 IPR014710 RmlC-like jelly roll fold RAM_41175 IPR005651 Trm112-like RAM_41180 IPR005841 Alpha-D-phosphohexomutase superfamily RAM_41180 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RAM_41180 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RAM_41180 IPR005843 Alpha-D-phosphohexomutase, C-terminal RAM_41180 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RAM_41180 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RAM_41180 IPR016066 Alpha-D-phosphohexomutase, conserved site RAM_41180 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RAM_41200 IPR003482 Transcription factor WhiB RAM_41200 IPR034768 WhiB-like iron-sulfur binding domain RAM_41220 IPR024078 Putative deacetylase LmbE-like domain superfamily RAM_41220 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RAM_41220 IPR017810 Mycothiol biosynthesis protein, MshB RAM_41225 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41225 IPR003593 AAA+ ATPase domain RAM_41225 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_41225 IPR003439 ABC transporter-like RAM_41225 IPR017871 ABC transporter, conserved site RAM_41230 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_41230 IPR035906 MetI-like superfamily RAM_41235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_41235 IPR035906 MetI-like superfamily RAM_41235 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RAM_41240 IPR035906 MetI-like superfamily RAM_41240 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_41250 IPR000914 Solute-binding protein family 5 domain RAM_41250 IPR039424 Solute-binding protein family 5 RAM_41270 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RAM_41270 IPR002305 Aminoacyl-tRNA synthetase, class Ic RAM_41270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_41270 IPR002306 Tryptophan-tRNA ligase RAM_41270 IPR024109 Tryptophan-tRNA ligase, bacterial-type RAM_41280 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_41280 IPR005467 Histidine kinase domain RAM_41280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_41280 IPR003660 HAMP domain RAM_41280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_41280 IPR003594 Histidine kinase/HSP90-like ATPase RAM_41280 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_41285 IPR039420 Transcriptional regulatory protein WalR-like RAM_41285 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_41285 IPR001789 Signal transduction response regulator, receiver domain RAM_41285 IPR011006 CheY-like superfamily RAM_41285 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_41295 IPR003593 AAA+ ATPase domain RAM_41295 IPR017871 ABC transporter, conserved site RAM_41295 IPR003439 ABC transporter-like RAM_41295 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41305 IPR013611 Transport-associated OB, type 2 RAM_41305 IPR015853 ABC transporter, ferric cation import, FbpC RAM_41305 IPR017871 ABC transporter, conserved site RAM_41305 IPR003439 ABC transporter-like RAM_41305 IPR003593 AAA+ ATPase domain RAM_41305 IPR008995 Molybdate/tungstate binding, C-terminal RAM_41305 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41310 IPR011867 Molybdate ABC transporter, permease protein RAM_41310 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_41310 IPR035906 MetI-like superfamily RAM_41320 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily RAM_41320 IPR001533 Pterin 4 alpha carbinolamine dehydratase RAM_41350 IPR006073 GTP binding domain RAM_41350 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 RAM_41350 IPR031167 OBG-type guanine nucleotide-binding (G) domain RAM_41350 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41350 IPR041706 YchF, N-terminal RAM_41350 IPR013029 YchF, C-terminal domain RAM_41350 IPR023192 TGS-like domain superfamily RAM_41350 IPR012676 TGS-like RAM_41350 IPR004095 TGS RAM_41350 IPR012675 Beta-grasp domain superfamily RAM_41355 IPR018062 HTH domain AraC-type, conserved site RAM_41355 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RAM_41355 IPR018060 DNA binding HTH domain, AraC-type RAM_41355 IPR004026 Ada DNA repair, metal-binding RAM_41355 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily RAM_41355 IPR009057 Homeobox-like domain superfamily RAM_41355 IPR035451 Ada-like domain superfamily RAM_41355 IPR011257 DNA glycosylase RAM_41355 IPR003265 HhH-GPD domain RAM_41355 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal RAM_41365 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41365 IPR038729 Rad50/SbcC-type AAA domain RAM_41370 IPR026843 Nuclease SbcCD subunit D, C-terminal domain RAM_41370 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RAM_41370 IPR004593 Nuclease SbcCD subunit D RAM_41370 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain RAM_41370 IPR029052 Metallo-dependent phosphatase-like RAM_41385 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase RAM_41395 IPR025824 OB-fold nucleic acid binding domain RAM_41395 IPR003753 Exonuclease VII, large subunit RAM_41395 IPR020579 Exonuclease VII, large subunit, C-terminal RAM_41405 IPR003761 Exonuclease VII, small subunit RAM_41405 IPR037004 Exonuclease VII, small subunit superfamily RAM_41410 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase RAM_41420 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_41420 IPR023753 FAD/NAD(P)-binding domain RAM_41420 IPR022890 Ferredoxin--NADP reductase, type 2 RAM_41425 IPR022761 Fumarate lyase, N-terminal RAM_41425 IPR018951 Fumarase C, C-terminal RAM_41425 IPR024083 Fumarase/histidase, N-terminal RAM_41425 IPR020557 Fumarate lyase, conserved site RAM_41425 IPR005677 Fumarate hydratase, class II RAM_41425 IPR008948 L-Aspartase-like RAM_41425 IPR000362 Fumarate lyase family RAM_41435 IPR016059 DNA ligase, ATP-dependent, conserved site RAM_41435 IPR012340 Nucleic acid-binding, OB-fold RAM_41435 IPR036599 DNA ligase, ATP-dependent, N-terminal domain superfamily RAM_41435 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_41435 IPR012310 DNA ligase, ATP-dependent, central RAM_41435 IPR000977 DNA ligase, ATP-dependent RAM_41435 IPR012308 DNA ligase, ATP-dependent, N-terminal RAM_41435 IPR022865 DNA ligase, ATP-dependent, bacterial/archaeal RAM_41450 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_41450 IPR001279 Metallo-beta-lactamase RAM_41470 IPR005991 IMP dehydrogenase-related 1 RAM_41470 IPR013785 Aldolase-type TIM barrel RAM_41470 IPR001093 IMP dehydrogenase/GMP reductase RAM_41470 IPR005990 Inosine-5'-monophosphate dehydrogenase RAM_41470 IPR000644 CBS domain RAM_41475 IPR005920 Imidazolonepropionase RAM_41475 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_41475 IPR006680 Amidohydrolase-related RAM_41475 IPR032466 Metal-dependent hydrolase RAM_41480 IPR003714 PhoH-like protein RAM_41480 IPR029060 PIN-like domain superfamily RAM_41480 IPR002716 PIN domain RAM_41480 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41485 IPR036424 Decaprenyl diphosphate synthase-like superfamily RAM_41485 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RAM_41485 IPR001441 Decaprenyl diphosphate synthase-like RAM_41490 IPR004254 AdipoR/Haemolysin-III-related RAM_41490 IPR005744 Hly-III RAM_41505 IPR019060 Domain of unknown function DUF2382 RAM_41505 IPR025889 General stress protein 17M-like domain RAM_41515 IPR006626 Parallel beta-helix repeat RAM_41515 IPR011049 Serralysin-like metalloprotease, C-terminal RAM_41515 IPR024535 Pectate lyase superfamily protein RAM_41515 IPR013858 Peptidase M10 serralysin, C-terminal RAM_41515 IPR006633 Carbohydrate-binding/sugar hydrolysis domain RAM_41515 IPR012334 Pectin lyase fold RAM_41515 IPR018511 Hemolysin-type calcium-binding conserved site RAM_41515 IPR001343 RTX calcium-binding nonapeptide repeat RAM_41515 IPR011050 Pectin lyase fold/virulence factor RAM_41535 IPR004879 Domain of unknown function DUF255 RAM_41535 IPR024705 Spermatogenesis-associated protein 20 RAM_41535 IPR036249 Thioredoxin-like superfamily RAM_41535 IPR012341 Six-hairpin glycosidase-like superfamily RAM_41535 IPR008928 Six-hairpin glycosidase superfamily RAM_41550 IPR040758 Release factor glutamine methyltransferase, N-terminal domain RAM_41550 IPR004556 Methyltransferase HemK-like RAM_41550 IPR007848 Methyltransferase small domain RAM_41550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_41550 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RAM_41550 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RAM_41555 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RAM_41555 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase RAM_41555 IPR029052 Metallo-dependent phosphatase-like RAM_41555 IPR041780 PrpE-like, metallophosphatase domain RAM_41555 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE RAM_41565 IPR017811 Mycothiol S-conjugate amidase Mca RAM_41565 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RAM_41565 IPR024078 Putative deacetylase LmbE-like domain superfamily RAM_41575 IPR023459 Transcription elongation factor GreA/GreB family RAM_41575 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily RAM_41575 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RAM_41575 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RAM_41575 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily RAM_41575 IPR028624 Transcription elongation factor GreA/GreB RAM_41575 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RAM_41580 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_41580 IPR001279 Metallo-beta-lactamase RAM_41585 IPR011991 ArsR-like helix-turn-helix domain RAM_41585 IPR000485 AsnC-type HTH domain RAM_41585 IPR011008 Dimeric alpha-beta barrel RAM_41585 IPR019888 Transcription regulator AsnC-type RAM_41585 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain RAM_41585 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RAM_41585 IPR036390 Winged helix DNA-binding domain superfamily RAM_41585 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_41590 IPR037523 Vicinal oxygen chelate (VOC) domain RAM_41590 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RAM_41590 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RAM_41590 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal RAM_41590 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal RAM_41590 IPR005956 4-hydroxyphenylpyruvate dioxygenase RAM_41620 IPR002912 ACT domain RAM_41620 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_41620 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RAM_41620 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_41620 IPR005789 Threonine dehydratase, catabolic RAM_41635 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RAM_41635 IPR015424 Pyridoxal phosphate-dependent transferase RAM_41635 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_41635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_41650 IPR005857 Cystathionine beta-synthase RAM_41650 IPR000644 CBS domain RAM_41650 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_41650 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_41655 IPR002155 Thiolase RAM_41655 IPR020615 Thiolase, acyl-enzyme intermediate active site RAM_41655 IPR020610 Thiolase, active site RAM_41655 IPR020617 Thiolase, C-terminal RAM_41655 IPR016039 Thiolase-like RAM_41655 IPR020613 Thiolase, conserved site RAM_41655 IPR020616 Thiolase, N-terminal RAM_41680 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_41680 IPR036291 NAD(P)-binding domain superfamily RAM_41690 IPR020556 Amidase, conserved site RAM_41690 IPR000120 Amidase RAM_41690 IPR036928 Amidase signature (AS) superfamily RAM_41690 IPR023631 Amidase signature domain RAM_41710 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_41710 IPR000253 Forkhead-associated (FHA) domain RAM_41710 IPR016032 Signal transduction response regulator, C-terminal effector RAM_41710 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_41710 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_41710 IPR005158 Bacterial transcriptional activator domain RAM_41710 IPR008984 SMAD/FHA domain superfamily RAM_41715 IPR013026 Tetratricopeptide repeat-containing domain RAM_41715 IPR016032 Signal transduction response regulator, C-terminal effector RAM_41715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41715 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_41715 IPR002182 NB-ARC RAM_41715 IPR019734 Tetratricopeptide repeat RAM_41715 IPR005158 Bacterial transcriptional activator domain RAM_41715 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_41715 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_41720 IPR017853 Glycoside hydrolase superfamily RAM_41720 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RAM_41720 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase RAM_41720 IPR018120 Glycoside hydrolase family 1, active site RAM_41720 IPR001360 Glycoside hydrolase family 1 RAM_41725 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_41725 IPR035906 MetI-like superfamily RAM_41730 IPR035906 MetI-like superfamily RAM_41730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_41740 IPR001789 Signal transduction response regulator, receiver domain RAM_41740 IPR000792 Transcription regulator LuxR, C-terminal RAM_41740 IPR016032 Signal transduction response regulator, C-terminal effector RAM_41740 IPR011006 CheY-like superfamily RAM_41745 IPR017853 Glycoside hydrolase superfamily RAM_41745 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_41745 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_41745 IPR019800 Glycoside hydrolase, family 3, active site RAM_41745 IPR022956 Beta-hexosaminidase, bacterial RAM_41750 IPR023210 NADP-dependent oxidoreductase domain RAM_41750 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_41760 IPR020846 Major facilitator superfamily domain RAM_41760 IPR036259 MFS transporter superfamily RAM_41760 IPR011701 Major facilitator superfamily RAM_41785 IPR001031 Thioesterase RAM_41785 IPR029058 Alpha/Beta hydrolase fold RAM_41785 IPR020802 Polyketide synthase, thioesterase domain RAM_41785 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS RAM_41790 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_41790 IPR036573 Carbohydrate-binding module superfamily 5/12 RAM_41790 IPR033116 Serine proteases, trypsin family, serine active site RAM_41790 IPR003610 Carbohydrate-binding module family 5/12 RAM_41790 IPR001316 Peptidase S1A, streptogrisin RAM_41790 IPR004236 Peptidase S1A, alpha-lytic prodomain RAM_41790 IPR035070 Streptogrisin prodomain RAM_41790 IPR009003 Peptidase S1, PA clan RAM_41795 IPR020449 Transcription regulator HTH, AraC- type RAM_41795 IPR018060 DNA binding HTH domain, AraC-type RAM_41795 IPR009057 Homeobox-like domain superfamily RAM_41795 IPR018062 HTH domain AraC-type, conserved site RAM_41810 IPR036434 1, 4-beta cellobiohydrolase superfamily RAM_41810 IPR018366 Carbohydrate-binding type-2, conserved site RAM_41810 IPR036116 Fibronectin type III superfamily RAM_41810 IPR003961 Fibronectin type III RAM_41810 IPR012291 CBM2, carbohydrate-binding domain superfamily RAM_41810 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_41810 IPR001919 Carbohydrate-binding type-2 domain RAM_41810 IPR016288 1, 4-beta cellobiohydrolase RAM_41810 IPR013783 Immunoglobulin-like fold RAM_41810 IPR001524 Glycoside hydrolase, family 6, conserved site RAM_41815 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_41815 IPR035647 EF-G domain III/V-like RAM_41815 IPR000640 Elongation factor EFG, domain V-like RAM_41815 IPR031157 Tr-type G domain, conserved site RAM_41815 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41815 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_41815 IPR000795 Transcription factor, GTP-binding domain RAM_41815 IPR009000 Translation protein, beta-barrel domain superfamily RAM_41815 IPR005225 Small GTP-binding protein domain RAM_41815 IPR005517 Translation elongation factor EFG/EF2, domain IV RAM_41815 IPR035650 Tetracycline resistance protein, C-terminal RAM_41825 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_41825 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_41825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_41825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_41825 IPR003660 HAMP domain RAM_41825 IPR005467 Histidine kinase domain RAM_41825 IPR003594 Histidine kinase/HSP90-like ATPase RAM_41830 IPR029017 Enolase-like, N-terminal RAM_41830 IPR020811 Enolase, N-terminal RAM_41830 IPR000941 Enolase RAM_41830 IPR020809 Enolase, conserved site RAM_41830 IPR036849 Enolase-like, C-terminal domain superfamily RAM_41830 IPR020810 Enolase, C-terminal TIM barrel domain RAM_41835 IPR019758 Peptidase S26A, signal peptidase I, conserved site RAM_41835 IPR019756 Peptidase S26A, signal peptidase I, serine active site RAM_41835 IPR000223 Peptidase S26A, signal peptidase I RAM_41835 IPR036286 LexA/Signal peptidase-like superfamily RAM_41835 IPR019757 Peptidase S26A, signal peptidase I, lysine active site RAM_41835 IPR019533 Peptidase S26 RAM_41840 IPR011917 ABC transporter, lipid A export, MsbA RAM_41840 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_41840 IPR011527 ABC transporter type 1, transmembrane domain RAM_41840 IPR003439 ABC transporter-like RAM_41840 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41840 IPR003593 AAA+ ATPase domain RAM_41840 IPR017871 ABC transporter, conserved site RAM_41840 IPR039421 Type I protein exporter RAM_41870 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41870 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_41870 IPR016032 Signal transduction response regulator, C-terminal effector RAM_41870 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_41870 IPR000792 Transcription regulator LuxR, C-terminal RAM_41875 IPR002938 FAD-binding domain RAM_41875 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_41885 IPR016032 Signal transduction response regulator, C-terminal effector RAM_41885 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_41885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_41885 IPR000792 Transcription regulator LuxR, C-terminal RAM_41885 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_41940 IPR039425 RNA polymerase sigma-70 like RAM_41940 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_41940 IPR014284 RNA polymerase sigma-70 like domain RAM_41940 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_41940 IPR007627 RNA polymerase sigma-70 region 2 RAM_41940 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_41940 IPR014286 RNA polymerase sigma-70 RpoE type RAM_41940 IPR013325 RNA polymerase sigma factor, region 2 RAM_41940 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_41945 IPR011009 Protein kinase-like domain superfamily RAM_41945 IPR008271 Serine/threonine-protein kinase, active site RAM_41945 IPR017441 Protein kinase, ATP binding site RAM_41945 IPR005543 PASTA domain RAM_41945 IPR000719 Protein kinase domain RAM_41975 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_41975 IPR009057 Homeobox-like domain superfamily RAM_41975 IPR001647 DNA-binding HTH domain, TetR-type RAM_41980 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_41980 IPR013325 RNA polymerase sigma factor, region 2 RAM_41980 IPR012845 RNA polymerase sigma factor, FliA/WhiG RAM_41980 IPR007630 RNA polymerase sigma-70 region 4 RAM_41980 IPR014284 RNA polymerase sigma-70 like domain RAM_41980 IPR007624 RNA polymerase sigma-70 region 3 RAM_41980 IPR007627 RNA polymerase sigma-70 region 2 RAM_41980 IPR000943 RNA polymerase sigma-70 RAM_42045 IPR005122 Uracil-DNA glycosylase-like RAM_42045 IPR036895 Uracil-DNA glycosylase-like domain superfamily RAM_42050 IPR007581 Endonuclease V RAM_42060 IPR034202 Subtilisin Carlsberg-like catalytic domain RAM_42060 IPR015500 Peptidase S8, subtilisin-related RAM_42060 IPR023828 Peptidase S8, subtilisin, Ser-active site RAM_42060 IPR022398 Peptidase S8, subtilisin, His-active site RAM_42060 IPR023827 Peptidase S8, subtilisin, Asp-active site RAM_42060 IPR036852 Peptidase S8/S53 domain superfamily RAM_42060 IPR000209 Peptidase S8/S53 domain RAM_42065 IPR003439 ABC transporter-like RAM_42065 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_42065 IPR017871 ABC transporter, conserved site RAM_42065 IPR003593 AAA+ ATPase domain RAM_42065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_42070 IPR003593 AAA+ ATPase domain RAM_42070 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_42070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_42070 IPR017871 ABC transporter, conserved site RAM_42070 IPR003439 ABC transporter-like RAM_42085 IPR039424 Solute-binding protein family 5 RAM_42085 IPR030678 Peptide/nickel binding protein, MppA-type RAM_42085 IPR000914 Solute-binding protein family 5 domain RAM_42090 IPR003695 Ppx/GppA phosphatase RAM_42110 IPR036849 Enolase-like, C-terminal domain superfamily RAM_42110 IPR000941 Enolase RAM_42110 IPR029017 Enolase-like, N-terminal RAM_42110 IPR020809 Enolase, conserved site RAM_42110 IPR020810 Enolase, C-terminal TIM barrel domain RAM_42110 IPR020811 Enolase, N-terminal RAM_42135 IPR005217 Iron permease FTR1-like RAM_42135 IPR004923 Iron permease FTR1/Fip1/EfeU RAM_42135 IPR036259 MFS transporter superfamily RAM_42140 IPR028096 EfeO-type cupredoxin-like domain RAM_42140 IPR008972 Cupredoxin RAM_42140 IPR018976 Imelysin-like domain RAM_42140 IPR034981 EfeO/Algp7, imelysin-like domain RAM_42140 IPR038352 Imelysin-like domain superfamily RAM_42145 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RAM_42145 IPR011008 Dimeric alpha-beta barrel RAM_42145 IPR006314 Dyp-type peroxidase RAM_42145 IPR006313 Deferrochelatase/peroxidase EfeB RAM_42145 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_42160 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative RAM_42160 IPR012349 FMN-binding split barrel RAM_42160 IPR024031 PPOX class F420-dependent enzyme, MSMEG_5819/OxyR family RAM_42175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_42175 IPR003439 ABC transporter-like RAM_42175 IPR017871 ABC transporter, conserved site RAM_42175 IPR003593 AAA+ ATPase domain RAM_42185 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_42185 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_42185 IPR013325 RNA polymerase sigma factor, region 2 RAM_42185 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_42185 IPR014284 RNA polymerase sigma-70 like domain RAM_42185 IPR007627 RNA polymerase sigma-70 region 2 RAM_42185 IPR039425 RNA polymerase sigma-70 like RAM_42190 IPR011551 NTP pyrophosphohydrolase MazG RAM_42190 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RAM_42210 IPR004576 Transcription-repair coupling factor RAM_42210 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_42210 IPR036101 CarD-like/TRCF domain superfamily RAM_42210 IPR011545 DEAD/DEAH box helicase domain RAM_42210 IPR005118 Transcription-repair-coupling factor, C-terminal domain RAM_42210 IPR037235 TRCF-like, C-terminal domain RAM_42210 IPR041471 UvrB, interaction domain RAM_42210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_42210 IPR003711 CarD-like/TRCF domain RAM_42210 IPR001650 Helicase, C-terminal RAM_42225 IPR032816 SNARE associated Golgi protein RAM_42225 IPR032818 DedA family RAM_42230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_42230 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RAM_42230 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RAM_42230 IPR023165 rRNA adenine dimethylase-like RAM_42230 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RAM_42230 IPR011530 Ribosomal RNA adenine dimethylase RAM_42235 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_42235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_42240 IPR011006 CheY-like superfamily RAM_42240 IPR016032 Signal transduction response regulator, C-terminal effector RAM_42240 IPR001789 Signal transduction response regulator, receiver domain RAM_42240 IPR000792 Transcription regulator LuxR, C-terminal RAM_42245 IPR011042 Six-bladed beta-propeller, TolB-like RAM_42245 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase RAM_42245 IPR012938 Glucose/Sorbosone dehydrogenase RAM_42255 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_42255 IPR036291 NAD(P)-binding domain superfamily RAM_42270 IPR000086 NUDIX hydrolase domain RAM_42270 IPR020476 NUDIX hydrolase RAM_42270 IPR015797 NUDIX hydrolase-like domain superfamily RAM_42275 IPR041646 IcaR, C-terminal RAM_42275 IPR009057 Homeobox-like domain superfamily RAM_42275 IPR001647 DNA-binding HTH domain, TetR-type RAM_42285 IPR029016 GAF-like domain superfamily RAM_42285 IPR001633 EAL domain RAM_42285 IPR035919 EAL domain superfamily RAM_42285 IPR029787 Nucleotide cyclase RAM_42285 IPR000160 GGDEF domain RAM_42285 IPR003018 GAF domain RAM_42290 IPR011004 Trimeric LpxA-like superfamily RAM_42290 IPR029044 Nucleotide-diphospho-sugar transferases RAM_42290 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase RAM_42290 IPR038009 GlmU, C-terminal LbH domain RAM_42290 IPR001451 Hexapeptide repeat RAM_42290 IPR025877 MobA-like NTP transferase RAM_42295 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type RAM_42295 IPR029057 Phosphoribosyltransferase-like RAM_42295 IPR000836 Phosphoribosyltransferase domain RAM_42295 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain RAM_42295 IPR005946 Ribose-phosphate pyrophosphokinase RAM_42295 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site RAM_42315 IPR037121 Ribosomal protein L25, C-terminal RAM_42315 IPR001021 Ribosomal protein L25, long-form RAM_42315 IPR004029 UreE urease accessory, N-terminal RAM_42315 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal RAM_42315 IPR029751 Ribosomal protein L25 RAM_42315 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily RAM_42315 IPR020057 Ribosomal protein L25, beta domain RAM_42320 IPR001328 Peptidyl-tRNA hydrolase RAM_42320 IPR018171 Peptidyl-tRNA hydrolase, conserved site RAM_42320 IPR036416 Peptidyl-tRNA hydrolase superfamily RAM_42325 IPR019933 DivIVA domain RAM_42325 IPR007793 DivIVA family RAM_42335 IPR028154 AMP-dependent ligase, C-terminal RAM_42335 IPR020845 AMP-binding, conserved site RAM_42335 IPR000873 AMP-dependent synthetase/ligase RAM_42335 IPR042099 AMP-dependent synthetase-like superfamily RAM_42340 IPR032524 ABC transporter Uup, C-terminal RAM_42340 IPR032781 ABC-transporter extension domain RAM_42340 IPR003439 ABC transporter-like RAM_42340 IPR017871 ABC transporter, conserved site RAM_42340 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_42340 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily RAM_42340 IPR003593 AAA+ ATPase domain RAM_42350 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase RAM_42350 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_42350 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_42350 IPR036554 GHMP kinase, C-terminal domain superfamily RAM_42350 IPR013750 GHMP kinase, C-terminal domain RAM_42350 IPR006204 GHMP kinase N-terminal domain RAM_42355 IPR017871 ABC transporter, conserved site RAM_42355 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_42355 IPR018449 NIL domain RAM_42355 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain RAM_42355 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal RAM_42355 IPR003593 AAA+ ATPase domain RAM_42355 IPR026253 Methionine import ATP-binding protein MetN RAM_42355 IPR003439 ABC transporter-like RAM_42360 IPR011530 Ribosomal RNA adenine dimethylase RAM_42360 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RAM_42360 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RAM_42360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_42360 IPR023165 rRNA adenine dimethylase-like RAM_42360 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RAM_42365 IPR010618 Transglycosylase-like RAM_42365 IPR023346 Lysozyme-like domain superfamily RAM_42365 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 RAM_42365 IPR011098 G5 domain RAM_42370 IPR001130 TatD family RAM_42370 IPR018228 Deoxyribonuclease, TatD-related, conserved site RAM_42370 IPR015991 Uncharacterised hydrolase TatD-type RAM_42370 IPR032466 Metal-dependent hydrolase RAM_42375 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RAM_42375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_42375 IPR014758 Methionyl-tRNA synthetase RAM_42375 IPR015413 Methionyl/Leucyl tRNA synthetase RAM_42375 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain RAM_42375 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RAM_42375 IPR029038 Methionyl-tRNA synthetase, Zn-domain RAM_42375 IPR033911 Methioninyl-tRNA synthetase core domain RAM_42375 IPR023458 Methionine-tRNA ligase, type 1 RAM_42385 IPR025302 Domain of unknown function DUF4162 RAM_42385 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_42385 IPR017871 ABC transporter, conserved site RAM_42385 IPR003439 ABC transporter-like RAM_42385 IPR003593 AAA+ ATPase domain RAM_42385 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_42400 IPR005801 ADC synthase RAM_42400 IPR005802 Aminodeoxychorismate synthase, component I RAM_42400 IPR015890 Chorismate-utilising enzyme, C-terminal RAM_42400 IPR006805 Anthranilate synthase component I, N-terminal RAM_42400 IPR019999 Anthranilate synthase component I-like RAM_42405 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RAM_42405 IPR013149 Alcohol dehydrogenase, C-terminal RAM_42405 IPR013154 Alcohol dehydrogenase, N-terminal RAM_42405 IPR020843 Polyketide synthase, enoylreductase domain RAM_42405 IPR011032 GroES-like superfamily RAM_42405 IPR036291 NAD(P)-binding domain superfamily RAM_42415 IPR014777 Tetrapyrrole methylase, subdomain 1 RAM_42415 IPR035996 Tetrapyrrole methylase superfamily RAM_42415 IPR000878 Tetrapyrrole methylase RAM_42415 IPR014776 Tetrapyrrole methylase, subdomain 2 RAM_42415 IPR008189 rRNA small subunit methyltransferase I RAM_42415 IPR018063 SAM-dependent methyltransferase RsmI, conserved site RAM_42420 IPR003342 Glycosyl transferase family 39/83 RAM_42420 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain RAM_42420 IPR027005 Glycosyltransferase 39-like RAM_42430 IPR011530 Ribosomal RNA adenine dimethylase RAM_42430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_42430 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RAM_42430 IPR023165 rRNA adenine dimethylase-like RAM_42430 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RAM_42430 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RAM_42435 IPR008271 Serine/threonine-protein kinase, active site RAM_42435 IPR017441 Protein kinase, ATP binding site RAM_42435 IPR000719 Protein kinase domain RAM_42435 IPR011009 Protein kinase-like domain superfamily RAM_42435 IPR005543 PASTA domain RAM_42440 IPR042099 AMP-dependent synthetase-like superfamily RAM_42440 IPR020845 AMP-binding, conserved site RAM_42440 IPR000873 AMP-dependent synthetase/ligase RAM_42440 IPR025110 AMP-binding enzyme, C-terminal domain RAM_42440 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain RAM_42445 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal RAM_42445 IPR025705 Beta-hexosaminidase RAM_42445 IPR015883 Glycoside hydrolase family 20, catalytic domain RAM_42445 IPR029018 Beta-hexosaminidase-like, domain 2 RAM_42445 IPR017853 Glycoside hydrolase superfamily RAM_42455 IPR005163 3-alpha domain RAM_42455 IPR011037 Pyruvate kinase-like, insert domain superfamily RAM_42455 IPR005302 Molybdenum cofactor sulfurase, C-terminal RAM_42465 IPR029039 Flavoprotein-like superfamily RAM_42465 IPR005025 NADPH-dependent FMN reductase-like RAM_42470 IPR014284 RNA polymerase sigma-70 like domain RAM_42470 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_42470 IPR013325 RNA polymerase sigma factor, region 2 RAM_42470 IPR007627 RNA polymerase sigma-70 region 2 RAM_42470 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_42470 IPR037401 SnoaL-like domain RAM_42470 IPR032710 NTF2-like domain superfamily RAM_42470 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_42505 IPR000731 Sterol-sensing domain RAM_42505 IPR004869 Membrane transport protein MMPL domain RAM_42515 IPR001633 EAL domain RAM_42515 IPR013655 PAS fold-3 RAM_42515 IPR013656 PAS fold-4 RAM_42515 IPR035965 PAS domain superfamily RAM_42515 IPR000700 PAS-associated, C-terminal RAM_42515 IPR000014 PAS domain RAM_42515 IPR001610 PAC motif RAM_42515 IPR029787 Nucleotide cyclase RAM_42515 IPR000160 GGDEF domain RAM_42515 IPR035919 EAL domain superfamily RAM_42520 IPR036396 Cytochrome P450 superfamily RAM_42520 IPR002403 Cytochrome P450, E-class, group IV RAM_42520 IPR017972 Cytochrome P450, conserved site RAM_42520 IPR001128 Cytochrome P450 RAM_42525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_42525 IPR025669 AAA domain RAM_42540 IPR036291 NAD(P)-binding domain superfamily RAM_42540 IPR008030 NmrA-like domain RAM_42550 IPR011006 CheY-like superfamily RAM_42550 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_42550 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_42550 IPR039420 Transcriptional regulatory protein WalR-like RAM_42550 IPR001789 Signal transduction response regulator, receiver domain RAM_42555 IPR003660 HAMP domain RAM_42555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_42555 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_42555 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_42555 IPR005467 Histidine kinase domain RAM_42555 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_42555 IPR003594 Histidine kinase/HSP90-like ATPase RAM_42560 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily RAM_42560 IPR000755 D-alanyl-D-alanine dipeptidase RAM_42565 IPR005905 D-alanine--D-alanine ligase RAM_42565 IPR016185 Pre-ATP-grasp domain superfamily RAM_42565 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RAM_42565 IPR011761 ATP-grasp fold RAM_42565 IPR013815 ATP-grasp fold, subdomain 1 RAM_42565 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RAM_42565 IPR011095 D-alanine--D-alanine ligase, C-terminal RAM_42570 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RAM_42570 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RAM_42570 IPR036291 NAD(P)-binding domain superfamily RAM_42570 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RAM_42570 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RAM_42575 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_42575 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_42580 IPR036390 Winged helix DNA-binding domain superfamily RAM_42580 IPR002577 Helix-turn-helix, HxlR type RAM_42580 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_42585 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_42585 IPR015424 Pyridoxal phosphate-dependent transferase RAM_42585 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_42585 IPR027619 Putative C-S lyase RAM_42585 IPR004839 Aminotransferase, class I/classII RAM_42590 IPR009081 Phosphopantetheine binding ACP domain RAM_42590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_42590 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_42590 IPR006162 Phosphopantetheine attachment site RAM_42590 IPR010071 Amino acid adenylation domain RAM_42590 IPR036736 ACP-like superfamily RAM_42590 IPR000873 AMP-dependent synthetase/ligase RAM_42590 IPR020845 AMP-binding, conserved site RAM_42590 IPR042099 AMP-dependent synthetase-like superfamily RAM_42590 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_42590 IPR013217 Methyltransferase type 12 RAM_42590 IPR001242 Condensation domain RAM_42600 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS RAM_42600 IPR001031 Thioesterase RAM_42600 IPR029058 Alpha/Beta hydrolase fold RAM_42605 IPR004778 Homoserine/Threonine efflux protein RAM_42605 IPR001123 Amino acid exporter protein, LeuE-type RAM_42615 IPR005543 PASTA domain RAM_42615 IPR011009 Protein kinase-like domain superfamily RAM_42615 IPR008271 Serine/threonine-protein kinase, active site RAM_42615 IPR017441 Protein kinase, ATP binding site RAM_42615 IPR000719 Protein kinase domain RAM_42675 IPR016181 Acyl-CoA N-acyltransferase RAM_42675 IPR000182 GNAT domain RAM_42680 IPR036135 MoeA, N-terminal and linker domain superfamily RAM_42680 IPR036425 MoaB/Mog-like domain superfamily RAM_42680 IPR005110 MoeA, N-terminal and linker domain RAM_42680 IPR036688 MoeA, C-terminal, domain IV superfamily RAM_42680 IPR005111 MoeA, C-terminal, domain IV RAM_42680 IPR038987 Molybdopterin biosynthesis protein MoeA-like RAM_42680 IPR001453 MoaB/Mog domain RAM_42685 IPR005835 Nucleotidyl transferase domain RAM_42685 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type RAM_42685 IPR029044 Nucleotide-diphospho-sugar transferases RAM_42690 IPR002698 5-formyltetrahydrofolate cyclo-ligase RAM_42690 IPR037171 NagB/RpiA transferase-like RAM_42690 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily RAM_42705 IPR036019 Gated mechanosensitive channel RAM_42705 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L RAM_42705 IPR001185 Large-conductance mechanosensitive channel RAM_42705 IPR019823 Large-conductance mechanosensitive channel, conserved site RAM_42715 IPR008284 Molybdenum cofactor biosynthesis, conserved site RAM_42715 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain RAM_42715 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily RAM_42715 IPR001453 MoaB/Mog domain RAM_42715 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA RAM_42715 IPR023045 Molybdenum cofactor biosynthesis C RAM_42715 IPR036425 MoaB/Mog-like domain superfamily RAM_42720 IPR036291 NAD(P)-binding domain superfamily RAM_42720 IPR001509 NAD-dependent epimerase/dehydratase RAM_42735 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_42735 IPR003594 Histidine kinase/HSP90-like ATPase RAM_42735 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_42735 IPR000014 PAS domain RAM_42735 IPR035965 PAS domain superfamily RAM_42735 IPR013767 PAS fold RAM_42735 IPR031967 PhoR, single Cache-like domain RAM_42735 IPR005467 Histidine kinase domain RAM_42735 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_42735 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_42740 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_42740 IPR039420 Transcriptional regulatory protein WalR-like RAM_42740 IPR011006 CheY-like superfamily RAM_42740 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_42740 IPR001789 Signal transduction response regulator, receiver domain RAM_42750 IPR029044 Nucleotide-diphospho-sugar transferases RAM_42750 IPR001173 Glycosyltransferase 2-like RAM_42760 IPR013216 Methyltransferase type 11 RAM_42760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_42760 IPR010233 Ubiquinone biosynthesis O-methyltransferase RAM_42775 IPR009003 Peptidase S1, PA clan RAM_42775 IPR001478 PDZ domain RAM_42775 IPR036034 PDZ superfamily RAM_42775 IPR001940 Peptidase S1C RAM_42775 IPR011782 Peptidase S1C, Do RAM_42780 IPR036265 HIT-like superfamily RAM_42780 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal RAM_42780 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal RAM_42780 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site RAM_42780 IPR001937 Galactose-1-phosphate uridyl transferase, class I RAM_42785 IPR001034 DeoR-type HTH domain RAM_42785 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_42785 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RAM_42785 IPR036390 Winged helix DNA-binding domain superfamily RAM_42785 IPR037171 NagB/RpiA transferase-like RAM_42785 IPR014036 DeoR C-terminal sensor domain RAM_42790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_42790 IPR003660 HAMP domain RAM_42790 IPR003594 Histidine kinase/HSP90-like ATPase RAM_42790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_42790 IPR005467 Histidine kinase domain RAM_42790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_42790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_42795 IPR011006 CheY-like superfamily RAM_42795 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_42795 IPR001789 Signal transduction response regulator, receiver domain RAM_42795 IPR039420 Transcriptional regulatory protein WalR-like RAM_42795 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_42800 IPR005115 Uncharacterised domain UPF0126 RAM_42805 IPR000792 Transcription regulator LuxR, C-terminal RAM_42805 IPR001789 Signal transduction response regulator, receiver domain RAM_42805 IPR016032 Signal transduction response regulator, C-terminal effector RAM_42805 IPR011006 CheY-like superfamily RAM_42810 IPR004498 Ribosomal protein L11 methyltransferase RAM_42810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_42820 IPR004638 Drug resistance transporter EmrB-like RAM_42820 IPR036259 MFS transporter superfamily RAM_42820 IPR020846 Major facilitator superfamily domain RAM_42820 IPR011701 Major facilitator superfamily RAM_42825 IPR005119 LysR, substrate-binding RAM_42825 IPR000847 Transcription regulator HTH, LysR RAM_42825 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_42825 IPR036390 Winged helix DNA-binding domain superfamily RAM_42830 IPR023210 NADP-dependent oxidoreductase domain RAM_42830 IPR020471 Aldo/keto reductase RAM_42830 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_42835 IPR004839 Aminotransferase, class I/classII RAM_42835 IPR015424 Pyridoxal phosphate-dependent transferase RAM_42835 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_42835 IPR036390 Winged helix DNA-binding domain superfamily RAM_42835 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_42835 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_42835 IPR000524 Transcription regulator HTH, GntR RAM_42850 IPR008271 Serine/threonine-protein kinase, active site RAM_42850 IPR000719 Protein kinase domain RAM_42850 IPR017441 Protein kinase, ATP binding site RAM_42850 IPR005543 PASTA domain RAM_42850 IPR011009 Protein kinase-like domain superfamily RAM_42855 IPR033942 Inositol monophosphatase RAM_42855 IPR020583 Inositol monophosphatase, metal-binding site RAM_42855 IPR000760 Inositol monophosphatase-like RAM_42855 IPR020550 Inositol monophosphatase, conserved site RAM_42855 IPR022337 Inositol monophosphatase, SuhB RAM_42860 IPR024087 Creatininase-like superfamily RAM_42860 IPR003785 Creatininase/formamide hydrolase RAM_42860 IPR023871 Mycofactocin system creatininase family protein RAM_42865 IPR032677 GTP cyclohydrolase II RAM_42865 IPR000926 GTP cyclohydrolase II, RibA RAM_42865 IPR036144 RibA-like superfamily RAM_42880 IPR001296 Glycosyl transferase, family 1 RAM_42880 IPR017814 Mycothiol biosynthesis protein, MshA RAM_42880 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RAM_42900 IPR012310 DNA ligase, ATP-dependent, central RAM_42900 IPR012340 Nucleic acid-binding, OB-fold RAM_42900 IPR033649 LigD polymerase domain, MtLigD-type RAM_42900 IPR012309 DNA ligase, ATP-dependent, C-terminal RAM_42900 IPR014144 DNA ligase D, 3'-phosphoesterase domain RAM_42900 IPR014145 DNA ligase D, polymerase domain RAM_42900 IPR014146 DNA ligase D, ligase domain RAM_42905 IPR018713 Domain of unknown function DUF2236 RAM_42910 IPR005119 LysR, substrate-binding RAM_42910 IPR000847 Transcription regulator HTH, LysR RAM_42910 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_42910 IPR036390 Winged helix DNA-binding domain superfamily RAM_42915 IPR016169 FAD-binding, type PCMH, subdomain 2 RAM_42915 IPR012951 Berberine/berberine-like RAM_42915 IPR016166 FAD-binding domain, PCMH-type RAM_42915 IPR036318 FAD-binding, type PCMH-like superfamily RAM_42915 IPR006094 FAD linked oxidase, N-terminal RAM_42915 IPR016167 FAD-binding, type PCMH, subdomain 1 RAM_42915 IPR006093 Oxygen oxidoreductase covalent FAD-binding site RAM_42920 IPR036514 SGNH hydrolase superfamily RAM_42920 IPR002656 Acyltransferase 3 RAM_42925 IPR004378 F420H(2)-dependent quinone reductase RAM_42925 IPR012349 FMN-binding split barrel RAM_42960 IPR002938 FAD-binding domain RAM_42960 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_42965 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_42965 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_42965 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_42965 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_42965 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_42965 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_42965 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_42975 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase RAM_42975 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RAM_42975 IPR017853 Glycoside hydrolase superfamily RAM_42975 IPR001360 Glycoside hydrolase family 1 RAM_42975 IPR018120 Glycoside hydrolase family 1, active site RAM_42980 IPR017871 ABC transporter, conserved site RAM_42980 IPR003593 AAA+ ATPase domain RAM_42980 IPR003439 ABC transporter-like RAM_42980 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_42980 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_42985 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RAM_42985 IPR035906 MetI-like superfamily RAM_42985 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_42990 IPR035906 MetI-like superfamily RAM_42990 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_42995 IPR003593 AAA+ ATPase domain RAM_42995 IPR003439 ABC transporter-like RAM_42995 IPR017871 ABC transporter, conserved site RAM_42995 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_42995 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_43000 IPR000914 Solute-binding protein family 5 domain RAM_43000 IPR039424 Solute-binding protein family 5 RAM_43000 IPR011980 Nickel ABC transporter, substrate-binding protein NikA RAM_43000 IPR030678 Peptide/nickel binding protein, MppA-type RAM_43000 IPR023765 Solute-binding protein family 5, conserved site RAM_43010 IPR000600 ROK family RAM_43010 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_43010 IPR036390 Winged helix DNA-binding domain superfamily RAM_43010 IPR000835 MarR-type HTH domain RAM_43015 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RAM_43015 IPR000757 Glycoside hydrolase family 16 RAM_43015 IPR008263 Glycoside hydrolase, family 16, active site RAM_43020 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_43020 IPR000772 Ricin B, lectin domain RAM_43020 IPR035992 Ricin B-like lectins RAM_43020 IPR037176 Osmotin/thaumatin-like superfamily RAM_43020 IPR032477 Beta-1,3-glucanase, N-terminal RAM_43020 IPR037398 Glucan endo-1,3-beta-glucosidase RAM_43025 IPR037176 Osmotin/thaumatin-like superfamily RAM_43025 IPR035992 Ricin B-like lectins RAM_43025 IPR000772 Ricin B, lectin domain RAM_43025 IPR037398 Glucan endo-1,3-beta-glucosidase RAM_43025 IPR032477 Beta-1,3-glucanase, N-terminal RAM_43025 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_43030 IPR017853 Glycoside hydrolase superfamily RAM_43045 IPR016938 Uncharacterised protein family UPF0317 RAM_43045 IPR038021 Putative hydro-lyase RAM_43045 IPR009906 D-glutamate cyclase RAM_43050 IPR005501 LamB/YcsF/PxpA-like RAM_43050 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RAM_43055 IPR003833 Carboxyltransferase domain, subdomain C and D RAM_43055 IPR029000 Cyclophilin-like domain superfamily RAM_43055 IPR010016 KipI family RAM_43060 IPR029000 Cyclophilin-like domain superfamily RAM_43060 IPR003778 Carboxyltransferase domain, subdomain A and B RAM_43080 IPR005123 Oxoglutarate/iron-dependent dioxygenase RAM_43080 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily RAM_43080 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like RAM_43080 IPR004574 Alkylated DNA repair protein AlkB RAM_43085 IPR013154 Alcohol dehydrogenase, N-terminal RAM_43085 IPR020843 Polyketide synthase, enoylreductase domain RAM_43085 IPR036291 NAD(P)-binding domain superfamily RAM_43085 IPR011032 GroES-like superfamily RAM_43085 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_43085 IPR013149 Alcohol dehydrogenase, C-terminal RAM_43100 IPR036390 Winged helix DNA-binding domain superfamily RAM_43100 IPR001367 Iron dependent repressor, metal binding and dimerisation domain RAM_43100 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily RAM_43100 IPR022687 DTXR-type HTH domain RAM_43100 IPR022897 HTH-type transcription regulator MntR RAM_43100 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_43100 IPR022689 Iron dependent repressor RAM_43115 IPR013108 Amidohydrolase 3 RAM_43115 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_43115 IPR032466 Metal-dependent hydrolase RAM_43115 IPR033932 YtcJ like RAM_43120 IPR029045 ClpP/crotonase-like domain superfamily RAM_43120 IPR014748 Enoyl-CoA hydratase, C-terminal RAM_43120 IPR001753 Enoyl-CoA hydratase/isomerase RAM_43120 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site RAM_43125 IPR025110 AMP-binding enzyme, C-terminal domain RAM_43125 IPR020845 AMP-binding, conserved site RAM_43125 IPR042099 AMP-dependent synthetase-like superfamily RAM_43125 IPR000873 AMP-dependent synthetase/ligase RAM_43125 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC RAM_43150 IPR005801 ADC synthase RAM_43150 IPR015890 Chorismate-utilising enzyme, C-terminal RAM_43150 IPR004561 Isochorismate synthase RAM_43160 IPR042099 AMP-dependent synthetase-like superfamily RAM_43160 IPR025110 AMP-binding enzyme, C-terminal domain RAM_43160 IPR000873 AMP-dependent synthetase/ligase RAM_43160 IPR020845 AMP-binding, conserved site RAM_43165 IPR006059 Bacterial extracellular solute-binding protein RAM_43165 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein RAM_43170 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_43170 IPR035906 MetI-like superfamily RAM_43175 IPR035906 MetI-like superfamily RAM_43175 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_43200 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_43200 IPR013325 RNA polymerase sigma factor, region 2 RAM_43200 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_43200 IPR007627 RNA polymerase sigma-70 region 2 RAM_43200 IPR037401 SnoaL-like domain RAM_43200 IPR032710 NTF2-like domain superfamily RAM_43200 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_43200 IPR014284 RNA polymerase sigma-70 like domain RAM_43205 IPR013154 Alcohol dehydrogenase, N-terminal RAM_43205 IPR011032 GroES-like superfamily RAM_43205 IPR013149 Alcohol dehydrogenase, C-terminal RAM_43205 IPR017816 S-(hydroxymethyl)mycothiol dehydrogenase RAM_43205 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RAM_43205 IPR036291 NAD(P)-binding domain superfamily RAM_43215 IPR004113 FAD-linked oxidase, C-terminal RAM_43215 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RAM_43215 IPR016166 FAD-binding domain, PCMH-type RAM_43215 IPR036318 FAD-binding, type PCMH-like superfamily RAM_43215 IPR016164 FAD-linked oxidase-like, C-terminal RAM_43215 IPR004490 Glycolate oxidase subunit GlcD RAM_43215 IPR006094 FAD linked oxidase, N-terminal RAM_43220 IPR009057 Homeobox-like domain superfamily RAM_43220 IPR001647 DNA-binding HTH domain, TetR-type RAM_43220 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_43220 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_43225 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase RAM_43225 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily RAM_43225 IPR006076 FAD dependent oxidoreductase RAM_43225 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_43225 IPR031656 Alpha-glycerophosphate oxidase, C-terminal RAM_43240 IPR025302 Domain of unknown function DUF4162 RAM_43240 IPR017871 ABC transporter, conserved site RAM_43240 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_43240 IPR003593 AAA+ ATPase domain RAM_43240 IPR003439 ABC transporter-like RAM_43255 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily RAM_43255 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal RAM_43255 IPR002081 Cryptochrome/DNA photolyase class 1 RAM_43255 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain RAM_43255 IPR006050 DNA photolyase, N-terminal RAM_43255 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_43255 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily RAM_43260 IPR016143 Citrate synthase-like, small alpha subdomain RAM_43260 IPR036969 Citrate synthase superfamily RAM_43260 IPR010953 Citrate synthase, type I RAM_43260 IPR002020 Citrate synthase RAM_43260 IPR019810 Citrate synthase active site RAM_43260 IPR016142 Citrate synthase-like, large alpha subdomain RAM_43260 IPR024176 Citrate synthase, bacterial-type RAM_43265 IPR029056 Ribokinase-like RAM_43265 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_43265 IPR011611 Carbohydrate kinase PfkB RAM_43275 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_43275 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_43275 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_43275 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_43275 IPR006089 Acyl-CoA dehydrogenase, conserved site RAM_43275 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_43275 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_43290 IPR006680 Amidohydrolase-related RAM_43290 IPR026912 Adenine deaminase C-terminal domain RAM_43290 IPR006679 Adenine deaminase RAM_43290 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_43290 IPR032466 Metal-dependent hydrolase RAM_43300 IPR037480 YihR-like RAM_43300 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_43300 IPR011013 Galactose mutarotase-like domain superfamily RAM_43300 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase RAM_43305 IPR030400 Sedolisin domain RAM_43305 IPR015366 Peptidase S53, activation domain RAM_43305 IPR023828 Peptidase S8, subtilisin, Ser-active site RAM_43305 IPR036852 Peptidase S8/S53 domain superfamily RAM_43305 IPR000209 Peptidase S8/S53 domain RAM_43310 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_43310 IPR009057 Homeobox-like domain superfamily RAM_43310 IPR001647 DNA-binding HTH domain, TetR-type RAM_43315 IPR001279 Metallo-beta-lactamase RAM_43315 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_43320 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_43320 IPR001279 Metallo-beta-lactamase RAM_43330 IPR010290 Transmembrane secretion effector RAM_43330 IPR020846 Major facilitator superfamily domain RAM_43330 IPR023722 Enterobactin exporter, EntS RAM_43330 IPR036259 MFS transporter superfamily RAM_43335 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal RAM_43335 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative RAM_43335 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site RAM_43335 IPR000659 Pyridoxamine 5'-phosphate oxidase RAM_43335 IPR012349 FMN-binding split barrel RAM_43350 IPR029058 Alpha/Beta hydrolase fold RAM_43350 IPR005152 Lipase, secreted RAM_43355 IPR002669 Urease accessory protein UreD RAM_43360 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_43360 IPR004400 Urease accessory protein UreG RAM_43360 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RAM_43365 IPR038277 UreF domain superfamily RAM_43365 IPR002639 Urease accessory protein UreF RAM_43370 IPR006680 Amidohydrolase-related RAM_43370 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_43370 IPR032466 Metal-dependent hydrolase RAM_43370 IPR011612 Urease alpha-subunit, N-terminal domain RAM_43370 IPR005848 Urease, alpha subunit RAM_43370 IPR017951 Urease alpha subunit, C-terminal RAM_43370 IPR017950 Urease active site RAM_43370 IPR029754 Urease nickel binding site RAM_43375 IPR002019 Urease, beta subunit RAM_43375 IPR036461 Urease, beta subunit superfamily RAM_43380 IPR002026 Urease, gamma/gamma-beta subunit RAM_43380 IPR012010 Urease, gamma subunit RAM_43380 IPR036463 Urease, gamma subunit superfamily RAM_43385 IPR016143 Citrate synthase-like, small alpha subdomain RAM_43385 IPR002020 Citrate synthase RAM_43385 IPR036969 Citrate synthase superfamily RAM_43385 IPR019810 Citrate synthase active site RAM_43385 IPR016142 Citrate synthase-like, large alpha subdomain RAM_43395 IPR029058 Alpha/Beta hydrolase fold RAM_43395 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_43395 IPR036291 NAD(P)-binding domain superfamily RAM_43395 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_43395 IPR000073 Alpha/beta hydrolase fold-1 RAM_43400 IPR017871 ABC transporter, conserved site RAM_43400 IPR003439 ABC transporter-like RAM_43400 IPR003593 AAA+ ATPase domain RAM_43400 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_43400 IPR025302 Domain of unknown function DUF4162 RAM_43400 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_43410 IPR003594 Histidine kinase/HSP90-like ATPase RAM_43410 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_43410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_43410 IPR005467 Histidine kinase domain RAM_43410 IPR007895 MASE1 RAM_43415 IPR001789 Signal transduction response regulator, receiver domain RAM_43415 IPR000792 Transcription regulator LuxR, C-terminal RAM_43415 IPR016032 Signal transduction response regulator, C-terminal effector RAM_43415 IPR011006 CheY-like superfamily RAM_43420 IPR012338 Beta-lactamase/transpeptidase-like RAM_43420 IPR001466 Beta-lactamase-related RAM_43430 IPR022278 Phosphoserine aminotransferase RAM_43430 IPR000192 Aminotransferase class V domain RAM_43430 IPR015424 Pyridoxal phosphate-dependent transferase RAM_43430 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_43430 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_43430 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type RAM_43435 IPR018584 Glycosyltransferase family 87 RAM_43440 IPR005920 Imidazolonepropionase RAM_43440 IPR006680 Amidohydrolase-related RAM_43440 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_43440 IPR032466 Metal-dependent hydrolase RAM_43445 IPR017871 ABC transporter, conserved site RAM_43445 IPR025857 MacB-like periplasmic core domain RAM_43445 IPR003838 ABC transporter permease protein domain RAM_43445 IPR003593 AAA+ ATPase domain RAM_43445 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_43445 IPR017911 ABC transporter, macrolide export, ATP-binding domain RAM_43445 IPR003439 ABC transporter-like RAM_43450 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_43450 IPR025857 MacB-like periplasmic core domain RAM_43450 IPR017871 ABC transporter, conserved site RAM_43450 IPR003439 ABC transporter-like RAM_43450 IPR003838 ABC transporter permease protein domain RAM_43450 IPR003593 AAA+ ATPase domain RAM_43450 IPR017911 ABC transporter, macrolide export, ATP-binding domain RAM_43465 IPR039420 Transcriptional regulatory protein WalR-like RAM_43465 IPR011006 CheY-like superfamily RAM_43465 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_43465 IPR001789 Signal transduction response regulator, receiver domain RAM_43465 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_43470 IPR003594 Histidine kinase/HSP90-like ATPase RAM_43470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_43470 IPR005467 Histidine kinase domain RAM_43470 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_43470 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_43470 IPR003660 HAMP domain RAM_43470 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_43475 IPR021421 Protein of unknown function DUF3071 RAM_43495 IPR029028 Alpha/beta knot methyltransferases RAM_43495 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RAM_43495 IPR001537 tRNA/rRNA methyltransferase, SpoU type RAM_43495 IPR029064 50S ribosomal protein L30e-like RAM_43510 IPR016053 Haem oxygenase-like RAM_43510 IPR002051 Haem oxygenase RAM_43510 IPR018207 Haem oxygenase conserved site RAM_43510 IPR016084 Haem oxygenase-like, multi-helical RAM_43515 IPR019831 Manganese/iron superoxide dismutase, N-terminal RAM_43515 IPR019832 Manganese/iron superoxide dismutase, C-terminal RAM_43515 IPR001189 Manganese/iron superoxide dismutase RAM_43515 IPR019833 Manganese/iron superoxide dismutase, binding site RAM_43515 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily RAM_43515 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily RAM_43520 IPR038765 Papain-like cysteine peptidase superfamily RAM_43520 IPR001447 Arylamine N-acetyltransferase RAM_43525 IPR036259 MFS transporter superfamily RAM_43525 IPR010290 Transmembrane secretion effector RAM_43525 IPR020846 Major facilitator superfamily domain RAM_43530 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_43530 IPR023187 Transcriptional regulator MarR-type, conserved site RAM_43530 IPR036390 Winged helix DNA-binding domain superfamily RAM_43530 IPR000835 MarR-type HTH domain RAM_43540 IPR006043 Xanthine/uracil/vitamin C permease RAM_43540 IPR026033 Azaguanine-like transporters RAM_43555 IPR021391 Protein of unknown function DUF3027 RAM_43565 IPR011701 Major facilitator superfamily RAM_43565 IPR036259 MFS transporter superfamily RAM_43575 IPR002059 Cold-shock protein, DNA-binding RAM_43575 IPR011129 Cold shock domain RAM_43575 IPR012340 Nucleic acid-binding, OB-fold RAM_43575 IPR019844 Cold-shock (CSD) domain RAM_43575 IPR012156 Cold shock, CspA RAM_43585 IPR023214 HAD superfamily RAM_43585 IPR041492 Haloacid dehalogenase-like hydrolase RAM_43585 IPR006439 HAD hydrolase, subfamily IA RAM_43585 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic RAM_43585 IPR037512 Phosphoglycolate phosphatase, prokaryotic RAM_43585 IPR036412 HAD-like superfamily RAM_43585 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RAM_43590 IPR001647 DNA-binding HTH domain, TetR-type RAM_43590 IPR004111 Tetracycline repressor TetR, C-terminal RAM_43590 IPR009057 Homeobox-like domain superfamily RAM_43590 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_43590 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_43590 IPR003012 Tetracycline transcriptional regulator, TetR RAM_43595 IPR033908 R2-like ligand binding oxidase RAM_43595 IPR009078 Ferritin-like superfamily RAM_43595 IPR000358 Ribonucleotide reductase small subunit family RAM_43595 IPR012348 Ribonucleotide reductase-like RAM_43600 IPR000873 AMP-dependent synthetase/ligase RAM_43600 IPR025110 AMP-binding enzyme, C-terminal domain RAM_43600 IPR020845 AMP-binding, conserved site RAM_43610 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_43610 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_43610 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_43610 IPR007627 RNA polymerase sigma-70 region 2 RAM_43610 IPR013325 RNA polymerase sigma factor, region 2 RAM_43610 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_43610 IPR014325 RNA polymerase sigma-E factor, actinobacteria RAM_43610 IPR014284 RNA polymerase sigma-70 like domain RAM_43615 IPR005102 Carbohydrate binding X2 domain RAM_43615 IPR001956 Carbohydrate-binding module 3 RAM_43615 IPR036966 Carbohydrate-binding module 3 superfamily RAM_43615 IPR013783 Immunoglobulin-like fold RAM_43615 IPR015943 WD40/YVTN repeat-like-containing domain superfamily RAM_43615 IPR014756 Immunoglobulin E-set RAM_43615 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily RAM_43620 IPR041569 AAA ATPase, AAA+ lid domain RAM_43620 IPR005936 Peptidase, FtsH RAM_43620 IPR003593 AAA+ ATPase domain RAM_43620 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_43620 IPR011546 Peptidase M41, FtsH extracellular RAM_43620 IPR037219 Peptidase M41-like RAM_43620 IPR003960 ATPase, AAA-type, conserved site RAM_43620 IPR003959 ATPase, AAA-type, core RAM_43620 IPR000642 Peptidase M41 RAM_43660 IPR003719 Phenazine biosynthesis PhzF protein RAM_43665 IPR031308 Uncharacterised conserved protein UCP028777 RAM_43665 IPR005185 Inner membrane component domain RAM_43670 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RAM_43670 IPR029052 Metallo-dependent phosphatase-like RAM_43670 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) RAM_43675 IPR023214 HAD superfamily RAM_43675 IPR036412 HAD-like superfamily RAM_43675 IPR006357 HAD-superfamily hydrolase, subfamily IIA RAM_43680 IPR011707 Multicopper oxidase, type 3 RAM_43680 IPR011706 Multicopper oxidase, type 2 RAM_43680 IPR002355 Multicopper oxidase, copper-binding site RAM_43680 IPR033138 Multicopper oxidases, conserved site RAM_43680 IPR008972 Cupredoxin RAM_43685 IPR004606 Molybdenum-pterin binding RAM_43685 IPR015852 ABC transporter, molybdenum import, ModC RAM_43685 IPR017871 ABC transporter, conserved site RAM_43685 IPR008995 Molybdate/tungstate binding, C-terminal RAM_43685 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_43685 IPR003593 AAA+ ATPase domain RAM_43685 IPR005116 Transport-associated OB, type 1 RAM_43685 IPR003439 ABC transporter-like RAM_43690 IPR011867 Molybdate ABC transporter, permease protein RAM_43690 IPR035906 MetI-like superfamily RAM_43690 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_43690 IPR006469 NifC-like ABC-type porter RAM_43695 IPR005950 Molybdate ABC transporter, substrate-binding protein RAM_43705 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_43705 IPR011991 ArsR-like helix-turn-helix domain RAM_43705 IPR036390 Winged helix DNA-binding domain superfamily RAM_43705 IPR000835 MarR-type HTH domain RAM_43710 IPR006638 Elp3/MiaB/NifB RAM_43710 IPR013483 Molybdenum cofactor biosynthesis protein A RAM_43710 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site RAM_43710 IPR010505 Molybdenum cofactor synthesis C-terminal RAM_43710 IPR007197 Radical SAM RAM_43710 IPR013785 Aldolase-type TIM barrel RAM_43720 IPR010618 Transglycosylase-like RAM_43720 IPR023346 Lysozyme-like domain superfamily RAM_43735 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily RAM_43735 IPR003448 Molybdopterin biosynthesis MoaE RAM_43740 IPR023045 Molybdenum cofactor biosynthesis C RAM_43740 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily RAM_43740 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain RAM_43745 IPR036291 NAD(P)-binding domain superfamily RAM_43745 IPR002912 ACT domain RAM_43745 IPR001891 Malic oxidoreductase RAM_43745 IPR012301 Malic enzyme, N-terminal domain RAM_43745 IPR037062 Malic enzyme, N-terminal domain superfamily RAM_43745 IPR012302 Malic enzyme, NAD-binding RAM_43745 IPR015884 Malic enzyme, conserved site RAM_43770 IPR004942 Roadblock/LAMTOR2 domain RAM_43785 IPR004942 Roadblock/LAMTOR2 domain RAM_43790 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_43790 IPR003594 Histidine kinase/HSP90-like ATPase RAM_43790 IPR013727 Two-component sensor kinase, N-terminal RAM_43790 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_43790 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_43790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_43790 IPR005467 Histidine kinase domain RAM_43795 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RAM_43795 IPR015168 SsuA/THI5-like RAM_43795 IPR010067 Aliphatic sulfonates-binding protein RAM_43800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_43800 IPR035906 MetI-like superfamily RAM_43800 IPR005889 Nitrate transport permease RAM_43805 IPR035906 MetI-like superfamily RAM_43805 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_43810 IPR003593 AAA+ ATPase domain RAM_43810 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_43810 IPR017871 ABC transporter, conserved site RAM_43810 IPR003439 ABC transporter-like RAM_43815 IPR000399 TPP-binding enzyme, conserved site RAM_43815 IPR029061 Thiamin diphosphate-binding fold RAM_43815 IPR012000 Thiamine pyrophosphate enzyme, central domain RAM_43815 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_43815 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RAM_43815 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RAM_43830 IPR030400 Sedolisin domain RAM_43830 IPR035986 PKD domain superfamily RAM_43830 IPR000601 PKD domain RAM_43830 IPR022409 PKD/Chitinase domain RAM_43830 IPR023828 Peptidase S8, subtilisin, Ser-active site RAM_43830 IPR036852 Peptidase S8/S53 domain superfamily RAM_43830 IPR015366 Peptidase S53, activation domain RAM_43830 IPR007280 Peptidase, C-terminal, archaeal/bacterial RAM_43830 IPR013783 Immunoglobulin-like fold RAM_43850 IPR036822 Copper homeostasis (CutC) domain superfamily RAM_43850 IPR005627 Copper homeostasis protein CutC RAM_43850 IPR023648 Copper homeostasis CutC domain RAM_43870 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_43870 IPR001650 Helicase, C-terminal RAM_43870 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_43870 IPR011332 Zinc-binding ribosomal protein RAM_43870 IPR006935 Helicase/UvrB, N-terminal RAM_43890 IPR010196 o-Succinylbenzoate synthase, MenC type1 RAM_43890 IPR041338 OSBS, enolase-like N-terminal domain RAM_43890 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_43890 IPR029065 Enolase C-terminal domain-like RAM_43890 IPR029017 Enolase-like, N-terminal RAM_43890 IPR036849 Enolase-like, C-terminal domain superfamily RAM_43905 IPR002423 Chaperonin Cpn60/TCP-1 family RAM_43905 IPR027409 GroEL-like apical domain superfamily RAM_43905 IPR001844 Chaperonin Cpn60 RAM_43905 IPR018370 Chaperonin Cpn60, conserved site RAM_43905 IPR027410 TCP-1-like chaperonin intermediate domain superfamily RAM_43905 IPR027413 GroEL-like equatorial domain superfamily RAM_43910 IPR011009 Protein kinase-like domain superfamily RAM_43910 IPR000719 Protein kinase domain RAM_43910 IPR017441 Protein kinase, ATP binding site RAM_43910 IPR012336 Thioredoxin-like fold RAM_43910 IPR036249 Thioredoxin-like superfamily RAM_43915 IPR011129 Cold shock domain RAM_43915 IPR002059 Cold-shock protein, DNA-binding RAM_43915 IPR012156 Cold shock, CspA RAM_43915 IPR019844 Cold-shock (CSD) domain RAM_43915 IPR012340 Nucleic acid-binding, OB-fold RAM_43930 IPR005110 MoeA, N-terminal and linker domain RAM_43930 IPR001453 MoaB/Mog domain RAM_43930 IPR038987 Molybdopterin biosynthesis protein MoeA-like RAM_43930 IPR005111 MoeA, C-terminal, domain IV RAM_43930 IPR036688 MoeA, C-terminal, domain IV superfamily RAM_43930 IPR036135 MoeA, N-terminal and linker domain superfamily RAM_43930 IPR036425 MoaB/Mog-like domain superfamily RAM_43945 IPR007341 Transglycosylase-associated protein RAM_43955 IPR033175 Phosphatidylserine decarboxylase, archaeal-type RAM_43955 IPR003817 Phosphatidylserine decarboxylase-related RAM_43960 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase RAM_43960 IPR000462 CDP-alcohol phosphatidyltransferase RAM_43965 IPR005936 Peptidase, FtsH RAM_43965 IPR037219 Peptidase M41-like RAM_43965 IPR000642 Peptidase M41 RAM_43965 IPR003593 AAA+ ATPase domain RAM_43965 IPR041569 AAA ATPase, AAA+ lid domain RAM_43965 IPR003959 ATPase, AAA-type, core RAM_43965 IPR003960 ATPase, AAA-type, conserved site RAM_43965 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_43980 IPR036821 Peptide deformylase superfamily RAM_43980 IPR023635 Peptide deformylase RAM_43985 IPR012341 Six-hairpin glycosidase-like superfamily RAM_43985 IPR000165 Glucoamylase RAM_43985 IPR008928 Six-hairpin glycosidase superfamily RAM_43985 IPR011613 GH15-like domain RAM_43985 IPR014718 Glycoside hydrolase-type carbohydrate-binding RAM_43985 IPR011013 Galactose mutarotase-like domain superfamily RAM_43985 IPR006425 Glucoamylase, bacterial RAM_43985 IPR015220 Glucodextranase, N-terminal RAM_43990 IPR009003 Peptidase S1, PA clan RAM_43990 IPR001940 Peptidase S1C RAM_43990 IPR001478 PDZ domain RAM_43990 IPR036034 PDZ superfamily RAM_43995 IPR025747 ThiC-associated domain RAM_43995 IPR037509 Phosphomethylpyrimidine synthase RAM_43995 IPR038521 ThiC/Bza superfamily RAM_43995 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B RAM_44000 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RAM_44000 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RAM_44000 IPR029056 Ribokinase-like RAM_44010 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RAM_44010 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RAM_44010 IPR029056 Ribokinase-like RAM_44015 IPR023187 Transcriptional regulator MarR-type, conserved site RAM_44015 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_44015 IPR036390 Winged helix DNA-binding domain superfamily RAM_44015 IPR000835 MarR-type HTH domain RAM_44020 IPR013785 Aldolase-type TIM barrel RAM_44020 IPR033983 Thiazole synthase ThiG RAM_44020 IPR008867 Thiazole synthase RAM_44035 IPR034291 Thiamine phosphate synthase RAM_44035 IPR013785 Aldolase-type TIM barrel RAM_44035 IPR036206 Thiamin phosphate synthase superfamily RAM_44035 IPR022998 Thiamine phosphate synthase/TenI RAM_44045 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RAM_44045 IPR005789 Threonine dehydratase, catabolic RAM_44045 IPR001926 Pyridoxal-phosphate dependent enzyme RAM_44045 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RAM_44045 IPR002912 ACT domain RAM_44050 IPR020846 Major facilitator superfamily domain RAM_44050 IPR036259 MFS transporter superfamily RAM_44050 IPR011701 Major facilitator superfamily RAM_44055 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_44055 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RAM_44055 IPR000524 Transcription regulator HTH, GntR RAM_44055 IPR011663 UbiC transcription regulator-associated RAM_44055 IPR036390 Winged helix DNA-binding domain superfamily RAM_44060 IPR035466 GlmS/AgaS, SIS domain 1 RAM_44060 IPR035490 GlmS/FrlB, SIS domain 2 RAM_44060 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising RAM_44060 IPR017932 Glutamine amidotransferase type 2 domain RAM_44060 IPR001347 Sugar isomerase (SIS) RAM_44060 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_44065 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type RAM_44075 IPR036130 Pyridoxine 5'-phosphate synthase RAM_44075 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ RAM_44075 IPR013785 Aldolase-type TIM barrel RAM_44105 IPR016032 Signal transduction response regulator, C-terminal effector RAM_44105 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_44105 IPR019734 Tetratricopeptide repeat RAM_44105 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_44105 IPR002182 NB-ARC RAM_44105 IPR005158 Bacterial transcriptional activator domain RAM_44105 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_44105 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_44105 IPR013026 Tetratricopeptide repeat-containing domain RAM_44110 IPR012774 Ectoine dioxygenase RAM_44110 IPR008775 Phytanoyl-CoA dioxygenase RAM_44115 IPR010462 Ectoine synthase RAM_44115 IPR011051 RmlC-like cupin domain superfamily RAM_44115 IPR014710 RmlC-like jelly roll fold RAM_44120 IPR015424 Pyridoxal phosphate-dependent transferase RAM_44120 IPR012773 Ectoine biosynthetic protein RAM_44120 IPR004637 2,4-diaminobutyrate 4-transaminase RAM_44120 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_44120 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_44120 IPR005814 Aminotransferase class-III RAM_44125 IPR000182 GNAT domain RAM_44125 IPR012772 L-2,4-diaminobutyric acid acetyltransferase RAM_44125 IPR016181 Acyl-CoA N-acyltransferase RAM_44130 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_44130 IPR024282 Domain of unknown function DUF3376 RAM_44130 IPR019894 Patatin-related protein RAM_44130 IPR002641 Patatin-like phospholipase domain RAM_44135 IPR011032 GroES-like superfamily RAM_44135 IPR036291 NAD(P)-binding domain superfamily RAM_44135 IPR013149 Alcohol dehydrogenase, C-terminal RAM_44135 IPR013154 Alcohol dehydrogenase, N-terminal RAM_44135 IPR020843 Polyketide synthase, enoylreductase domain RAM_44140 IPR002577 Helix-turn-helix, HxlR type RAM_44140 IPR036390 Winged helix DNA-binding domain superfamily RAM_44140 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_44145 IPR007383 Protein of unknown function DUF445 RAM_44145 IPR016991 Protein of unknown function UCP032178 RAM_44160 IPR010445 Lipopolysaccharide assembly protein A domain RAM_44185 IPR011957 Benzoate-CoA ligase family RAM_44185 IPR000873 AMP-dependent synthetase/ligase RAM_44185 IPR025110 AMP-binding enzyme, C-terminal domain RAM_44210 IPR011658 PA14 domain RAM_44210 IPR026891 Fibronectin type III-like domain RAM_44210 IPR008979 Galactose-binding-like domain superfamily RAM_44210 IPR019800 Glycoside hydrolase, family 3, active site RAM_44210 IPR002772 Glycoside hydrolase family 3 C-terminal domain RAM_44210 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily RAM_44210 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_44210 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_44210 IPR017853 Glycoside hydrolase superfamily RAM_44210 IPR013783 Immunoglobulin-like fold RAM_44210 IPR037524 PA14/GLEYA domain RAM_44220 IPR036390 Winged helix DNA-binding domain superfamily RAM_44220 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_44220 IPR011991 ArsR-like helix-turn-helix domain RAM_44220 IPR002577 Helix-turn-helix, HxlR type RAM_44245 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_44245 IPR017871 ABC transporter, conserved site RAM_44245 IPR003593 AAA+ ATPase domain RAM_44245 IPR011527 ABC transporter type 1, transmembrane domain RAM_44245 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_44245 IPR039421 Type I protein exporter RAM_44245 IPR003439 ABC transporter-like RAM_44250 IPR017630 4-oxalocrotonate decarboxylase RAM_44250 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily RAM_44255 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily RAM_44255 IPR023793 2-keto-4-pentenoate hydratase RAM_44255 IPR011234 Fumarylacetoacetase-like, C-terminal RAM_44260 IPR037523 Vicinal oxygen chelate (VOC) domain RAM_44260 IPR004361 Glyoxalase I RAM_44260 IPR018146 Glyoxalase I, conserved site RAM_44260 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RAM_44260 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RAM_44270 IPR003781 CoA-binding RAM_44270 IPR036291 NAD(P)-binding domain superfamily RAM_44285 IPR018493 Gas vesicle protein GvpA, conserved site RAM_44285 IPR000638 Gas vesicle protein GvpA RAM_44290 IPR000638 Gas vesicle protein GvpA RAM_44290 IPR007805 Gas vesicle protein GvpK RAM_44295 IPR018493 Gas vesicle protein GvpA, conserved site RAM_44295 IPR000638 Gas vesicle protein GvpA RAM_44305 IPR000638 Gas vesicle protein GvpA RAM_44305 IPR018493 Gas vesicle protein GvpA, conserved site RAM_44315 IPR011006 CheY-like superfamily RAM_44315 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_44315 IPR039420 Transcriptional regulatory protein WalR-like RAM_44315 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_44315 IPR001789 Signal transduction response regulator, receiver domain RAM_44320 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_44320 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_44320 IPR005467 Histidine kinase domain RAM_44320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_44320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_44320 IPR003594 Histidine kinase/HSP90-like ATPase RAM_44320 IPR003660 HAMP domain RAM_44325 IPR029062 Class I glutamine amidotransferase-like RAM_44325 IPR017929 CobB/CobQ glutamine amidotransferase RAM_44325 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RAM_44325 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 RAM_44325 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_44325 IPR011698 CobB/CobQ-like glutamine amidotransferase RAM_44325 IPR004459 Cobyric acid synthase CobQ RAM_44330 IPR036565 Mur-like, catalytic domain superfamily RAM_44330 IPR013221 Mur ligase, central RAM_44330 IPR036615 Mur ligase, C-terminal domain superfamily RAM_44330 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RAM_44330 IPR004101 Mur ligase, C-terminal RAM_44335 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RAM_44335 IPR014043 Acyl transferase RAM_44335 IPR013154 Alcohol dehydrogenase, N-terminal RAM_44335 IPR036347 Erythronolide synthase, docking domain superfamily RAM_44335 IPR015357 Erythronolide synthase, docking RAM_44335 IPR036736 ACP-like superfamily RAM_44335 IPR011032 GroES-like superfamily RAM_44335 IPR018201 Beta-ketoacyl synthase, active site RAM_44335 IPR014031 Beta-ketoacyl synthase, C-terminal RAM_44335 IPR014030 Beta-ketoacyl synthase, N-terminal RAM_44335 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RAM_44335 IPR016039 Thiolase-like RAM_44335 IPR006162 Phosphopantetheine attachment site RAM_44335 IPR036291 NAD(P)-binding domain superfamily RAM_44335 IPR009081 Phosphopantetheine binding ACP domain RAM_44335 IPR032821 Ketoacyl-synthetase, C-terminal extension RAM_44335 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RAM_44335 IPR001227 Acyl transferase domain superfamily RAM_44335 IPR015083 Polyketide synthase, docking domain RAM_44335 IPR020807 Polyketide synthase, dehydratase domain RAM_44335 IPR042104 Polyketide synthase, dehydratase domain superfamily RAM_44335 IPR020843 Polyketide synthase, enoylreductase domain RAM_44335 IPR013968 Polyketide synthase, ketoreductase domain RAM_44335 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RAM_44340 IPR009057 Homeobox-like domain superfamily RAM_44340 IPR041646 IcaR, C-terminal RAM_44340 IPR001647 DNA-binding HTH domain, TetR-type RAM_44350 IPR003804 L-lactate permease RAM_44355 IPR022971 5'-deoxynucleotidase YfbR RAM_44355 IPR039356 Metal-dependent nucleoside 5'-monophosphatase RAM_44355 IPR003607 HD/PDEase domain RAM_44360 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_44360 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_44360 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_44360 IPR013325 RNA polymerase sigma factor, region 2 RAM_44360 IPR014284 RNA polymerase sigma-70 like domain RAM_44360 IPR007627 RNA polymerase sigma-70 region 2 RAM_44360 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_44365 IPR005545 YCII-related RAM_44365 IPR011008 Dimeric alpha-beta barrel RAM_44370 IPR005545 YCII-related RAM_44370 IPR011008 Dimeric alpha-beta barrel RAM_44390 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_44390 IPR005467 Histidine kinase domain RAM_44390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_44390 IPR003594 Histidine kinase/HSP90-like ATPase RAM_44390 IPR003660 HAMP domain RAM_44390 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_44390 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_44430 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_44430 IPR007627 RNA polymerase sigma-70 region 2 RAM_44430 IPR013325 RNA polymerase sigma factor, region 2 RAM_44430 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_44430 IPR037401 SnoaL-like domain RAM_44430 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_44430 IPR014284 RNA polymerase sigma-70 like domain RAM_44430 IPR032710 NTF2-like domain superfamily RAM_44455 IPR023828 Peptidase S8, subtilisin, Ser-active site RAM_44455 IPR036852 Peptidase S8/S53 domain superfamily RAM_44455 IPR000209 Peptidase S8/S53 domain RAM_44455 IPR030400 Sedolisin domain RAM_44455 IPR015366 Peptidase S53, activation domain RAM_44460 IPR012334 Pectin lyase fold RAM_44470 IPR009061 Putative DNA-binding domain superfamily RAM_44470 IPR000551 MerR-type HTH domain RAM_44490 IPR001830 Glycosyl transferase, family 20 RAM_44510 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RAM_44510 IPR029058 Alpha/Beta hydrolase fold RAM_44510 IPR002469 Dipeptidylpeptidase IV, N-terminal domain RAM_44510 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily RAM_44515 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_44515 IPR039425 RNA polymerase sigma-70 like RAM_44515 IPR014284 RNA polymerase sigma-70 like domain RAM_44515 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_44515 IPR007627 RNA polymerase sigma-70 region 2 RAM_44515 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_44515 IPR013325 RNA polymerase sigma factor, region 2 RAM_44515 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_44525 IPR041166 LapB, rubredoxin metal binding domain RAM_44525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RAM_44525 IPR020568 Ribosomal protein S5 domain 2-type fold RAM_44525 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain RAM_44525 IPR003593 AAA+ ATPase domain RAM_44525 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_44525 IPR014774 KaiC-like domain RAM_44525 IPR004504 DNA repair protein RadA RAM_44535 IPR042215 CarD-like, C-terminal domain RAM_44535 IPR036101 CarD-like/TRCF domain superfamily RAM_44535 IPR003711 CarD-like/TRCF domain RAM_44540 IPR034683 Cytidylyltransferase IspD/TarI RAM_44540 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RAM_44540 IPR029044 Nucleotide-diphospho-sugar transferases RAM_44540 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site RAM_44545 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily RAM_44545 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase RAM_44545 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site RAM_44565 IPR015803 Cysteine-tRNA ligase RAM_44565 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR RAM_44565 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RAM_44565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_44565 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RAM_44565 IPR032678 tRNA synthetases class I, catalytic domain RAM_44570 IPR004441 RNA methyltransferase TrmH family RAM_44570 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RAM_44570 IPR029028 Alpha/beta knot methyltransferases RAM_44570 IPR001537 tRNA/rRNA methyltransferase, SpoU type RAM_44570 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RAM_44570 IPR029064 50S ribosomal protein L30e-like RAM_44575 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB RAM_44575 IPR004299 Membrane bound O-acyl transferase, MBOAT RAM_44575 IPR028362 Alginate O-acetyltransferase AlgI RAM_44605 IPR036409 Class II aldolase/adducin N-terminal domain superfamily RAM_44605 IPR001303 Class II aldolase/adducin N-terminal RAM_44620 IPR016991 Protein of unknown function UCP032178 RAM_44620 IPR007383 Protein of unknown function DUF445 RAM_44625 IPR001626 ABC transporter, TroCD-like RAM_44625 IPR037294 ABC transporter, BtuC-like RAM_44630 IPR003593 AAA+ ATPase domain RAM_44630 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_44630 IPR017882 Zinc import ATP-binding protein ZnuC RAM_44630 IPR003439 ABC transporter-like RAM_44635 IPR006129 Adhesin B RAM_44635 IPR006128 Adhesion lipoprotein RAM_44635 IPR006127 Periplasmic solute binding protein, ZnuA-like RAM_44640 IPR028082 Periplasmic binding protein-like I RAM_44640 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_44640 IPR000843 LacI-type HTH domain RAM_44645 IPR036874 Carbonic anhydrase superfamily RAM_44645 IPR001765 Carbonic anhydrase RAM_44650 IPR010610 Domain of unknown function DUF1205 RAM_44655 IPR003265 HhH-GPD domain RAM_44655 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RAM_44655 IPR000445 Helix-hairpin-helix motif RAM_44655 IPR011257 DNA glycosylase RAM_44655 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RAM_44670 IPR012778 Peptidase M1, aminopeptidase RAM_44670 IPR024571 ERAP1-like C-terminal domain RAM_44670 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase RAM_44670 IPR042097 Aminopeptidase N-like , N-terminal RAM_44670 IPR014782 Peptidase M1, membrane alanine aminopeptidase RAM_44675 IPR041569 AAA ATPase, AAA+ lid domain RAM_44675 IPR003593 AAA+ ATPase domain RAM_44675 IPR005936 Peptidase, FtsH RAM_44675 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_44675 IPR011546 Peptidase M41, FtsH extracellular RAM_44675 IPR000642 Peptidase M41 RAM_44675 IPR037219 Peptidase M41-like RAM_44675 IPR003960 ATPase, AAA-type, conserved site RAM_44675 IPR003959 ATPase, AAA-type, core RAM_44680 IPR007138 Antibiotic biosynthesis monooxygenase domain RAM_44680 IPR011008 Dimeric alpha-beta barrel RAM_44685 IPR026590 Sirtuin family, catalytic core domain RAM_44685 IPR029035 DHS-like NAD/FAD-binding domain superfamily RAM_44685 IPR003000 Sirtuin family RAM_44685 IPR026591 Sirtuin, catalytic core small domain superfamily RAM_44685 IPR028628 Sirtuin, class U RAM_44740 IPR017871 ABC transporter, conserved site RAM_44740 IPR003439 ABC transporter-like RAM_44740 IPR003593 AAA+ ATPase domain RAM_44740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_44740 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA RAM_44740 IPR025302 Domain of unknown function DUF4162 RAM_44745 IPR013525 ABC-2 type transporter RAM_44745 IPR000412 ABC-2 transporter RAM_44750 IPR016032 Signal transduction response regulator, C-terminal effector RAM_44750 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_44750 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_44750 IPR000792 Transcription regulator LuxR, C-terminal RAM_44750 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_44760 IPR033693 Pyroglutamyl peptidase I, Glu active site RAM_44760 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily RAM_44760 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RAM_44760 IPR000816 Peptidase C15, pyroglutamyl peptidase I RAM_44760 IPR033694 Pyroglutamyl peptidase I, Cys active site RAM_44760 IPR029762 Pyroglutamyl peptidase I, bacterial-type RAM_44770 IPR042039 HscA chaperone, nucleotide-binding domain RAM_44770 IPR018181 Heat shock protein 70, conserved site RAM_44770 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily RAM_44770 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RAM_44770 IPR010236 ISC system FeS cluster assembly, HscA chaperone RAM_44770 IPR013126 Heat shock protein 70 family RAM_44775 IPR039554 HigA2-like, helix-turn-helix domain RAM_44775 IPR001387 Cro/C1-type helix-turn-helix domain RAM_44775 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_44780 IPR009241 Toxin HigB-like RAM_44785 IPR009241 Toxin HigB-like RAM_44790 IPR019489 Clp ATPase, C-terminal RAM_44790 IPR003593 AAA+ ATPase domain RAM_44790 IPR036628 Clp, N-terminal domain superfamily RAM_44790 IPR004176 Clp, N-terminal RAM_44790 IPR001270 ClpA/B family RAM_44790 IPR018368 ClpA/B, conserved site 1 RAM_44790 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_44790 IPR003959 ATPase, AAA-type, core RAM_44790 IPR041546 ClpA/ClpB, AAA lid domain RAM_44790 IPR001943 UVR domain RAM_44810 IPR024412 Lsr2 RAM_44810 IPR042254 Lsr2, DNA binding domain RAM_44810 IPR042261 Lsr2, dimerization domain RAM_44815 IPR002313 Lysine-tRNA ligase, class II RAM_44815 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RAM_44815 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RAM_44815 IPR012340 Nucleic acid-binding, OB-fold RAM_44815 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RAM_44815 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_44820 IPR013216 Methyltransferase type 11 RAM_44820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_44825 IPR004619 Type III pantothenate kinase RAM_44830 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_44830 IPR003190 Aspartate decarboxylase RAM_44835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_44835 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain RAM_44835 IPR003721 Pantoate-beta-alanine ligase RAM_44860 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator RAM_44860 IPR009061 Putative DNA-binding domain superfamily RAM_44860 IPR000551 MerR-type HTH domain RAM_44865 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RAM_44865 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily RAM_44870 IPR006157 Dihydroneopterin aldolase/epimerase domain RAM_44870 IPR006156 Dihydroneopterin aldolase RAM_44875 IPR006390 Dihydropteroate synthase RAM_44875 IPR000489 Pterin-binding domain RAM_44875 IPR011005 Dihydropteroate synthase-like RAM_44880 IPR001474 GTP cyclohydrolase I RAM_44880 IPR018234 GTP cyclohydrolase I, conserved site RAM_44880 IPR020602 GTP cyclohydrolase I domain RAM_44885 IPR041569 AAA ATPase, AAA+ lid domain RAM_44885 IPR003593 AAA+ ATPase domain RAM_44885 IPR003959 ATPase, AAA-type, core RAM_44885 IPR003960 ATPase, AAA-type, conserved site RAM_44885 IPR005936 Peptidase, FtsH RAM_44885 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_44885 IPR000642 Peptidase M41 RAM_44885 IPR037219 Peptidase M41-like RAM_44915 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain RAM_44915 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal RAM_44915 IPR012094 tRNA(Ile)-lysidine synthase RAM_44915 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RAM_44915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_44930 IPR008162 Inorganic pyrophosphatase RAM_44930 IPR036649 Inorganic pyrophosphatase superfamily RAM_44935 IPR036259 MFS transporter superfamily RAM_44935 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_44935 IPR036390 Winged helix DNA-binding domain superfamily RAM_44935 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RAM_44935 IPR020846 Major facilitator superfamily domain RAM_44935 IPR005829 Sugar transporter, conserved site RAM_44935 IPR011701 Major facilitator superfamily RAM_44940 IPR015424 Pyridoxal phosphate-dependent transferase RAM_44940 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_44940 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_44940 IPR001085 Serine hydroxymethyltransferase RAM_44940 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RAM_44940 IPR039429 Serine hydroxymethyltransferase-like domain RAM_44945 IPR006519 Ribosomal protein L11, bacterial-type RAM_44945 IPR020784 Ribosomal protein L11, N-terminal RAM_44945 IPR020785 Ribosomal protein L11, conserved site RAM_44945 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily RAM_44945 IPR020783 Ribosomal protein L11, C-terminal RAM_44945 IPR000911 Ribosomal protein L11/L12 RAM_44945 IPR036769 Ribosomal protein L11, C-terminal domain superfamily RAM_44950 IPR023446 Carnitine operon protein CaiE RAM_44950 IPR001451 Hexapeptide repeat RAM_44950 IPR011004 Trimeric LpxA-like superfamily RAM_44955 IPR033810 Carboxypeptidase T RAM_44955 IPR000834 Peptidase M14, carboxypeptidase A RAM_44970 IPR011008 Dimeric alpha-beta barrel RAM_44970 IPR009799 EthD domain RAM_45035 IPR011663 UbiC transcription regulator-associated RAM_45035 IPR036390 Winged helix DNA-binding domain superfamily RAM_45035 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_45035 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RAM_45035 IPR000524 Transcription regulator HTH, GntR RAM_45050 IPR041027 FtsK alpha domain RAM_45050 IPR003593 AAA+ ATPase domain RAM_45050 IPR025199 DNA translocase FtsK, 4TM region RAM_45050 IPR002543 FtsK domain RAM_45050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45050 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_45050 IPR036390 Winged helix DNA-binding domain superfamily RAM_45050 IPR018541 FtsK gamma domain RAM_45075 IPR011010 DNA breaking-rejoining enzyme, catalytic core RAM_45075 IPR013762 Integrase-like, catalytic domain superfamily RAM_45075 IPR002104 Integrase, catalytic domain RAM_45075 IPR010998 Integrase/recombinase, N-terminal RAM_45090 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45090 IPR012763 DNA polymerase III, subunit gamma/ tau RAM_45090 IPR022754 DNA polymerase III, gamma subunit, domain III RAM_45090 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RAM_45090 IPR003593 AAA+ ATPase domain RAM_45090 IPR001270 ClpA/B family RAM_45095 IPR018094 Thymidylate kinase RAM_45095 IPR018095 Thymidylate kinase, conserved site RAM_45095 IPR039430 Thymidylate kinase-like domain RAM_45095 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45125 IPR023405 DNA topoisomerase, type IA, core domain RAM_45125 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RAM_45125 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RAM_45125 IPR034149 DNA topoisomerase 1, TOPRIM domain RAM_45125 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RAM_45125 IPR025589 Topoisomerase C-terminal repeat RAM_45125 IPR028612 DNA topoisomerase I, type IA RAM_45125 IPR006171 TOPRIM domain RAM_45125 IPR013497 DNA topoisomerase, type IA, central RAM_45125 IPR023406 DNA topoisomerase, type IA, active site RAM_45125 IPR000380 DNA topoisomerase, type IA RAM_45125 IPR003601 DNA topoisomerase, type IA, domain 2 RAM_45125 IPR005733 DNA topoisomerase I, bacterial-type RAM_45125 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 RAM_45145 IPR004131 Pyrophosphate-energised proton pump RAM_45150 IPR011545 DEAD/DEAH box helicase domain RAM_45150 IPR014001 Helicase superfamily 1/2, ATP-binding domain RAM_45150 IPR001650 Helicase, C-terminal RAM_45150 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45150 IPR018973 DEAD/DEAH-box helicase, putative RAM_45180 IPR001482 Type II/IV secretion system protein RAM_45180 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45180 IPR022399 Helicase/secretion neighbourhood ATPase RAM_45185 IPR022521 Conserved hypothetical protein CHP03815, CpaE-like RAM_45185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45190 IPR023214 HAD superfamily RAM_45190 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like RAM_45190 IPR036412 HAD-like superfamily RAM_45195 IPR017853 Glycoside hydrolase superfamily RAM_45195 IPR002772 Glycoside hydrolase family 3 C-terminal domain RAM_45195 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily RAM_45195 IPR001764 Glycoside hydrolase, family 3, N-terminal RAM_45195 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily RAM_45195 IPR019800 Glycoside hydrolase, family 3, active site RAM_45200 IPR008302 Uncharacterised conserved protein UCP016719 RAM_45205 IPR012338 Beta-lactamase/transpeptidase-like RAM_45205 IPR022849 Peptidase S12, YfeW/YbbE-like RAM_45205 IPR001466 Beta-lactamase-related RAM_45210 IPR009057 Homeobox-like domain superfamily RAM_45210 IPR000281 Helix-turn-helix protein RpiR RAM_45210 IPR001347 Sugar isomerase (SIS) RAM_45210 IPR035472 RpiR-like, SIS domain RAM_45210 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_45215 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ RAM_45215 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein RAM_45215 IPR001347 Sugar isomerase (SIS) RAM_45215 IPR009060 UBA-like superfamily RAM_45215 IPR005486 Glucokinase regulatory protein, conserved site RAM_45220 IPR011541 Nickel/cobalt transporter, high-affinity RAM_45220 IPR004688 Transition metal uptake transporter nickel/cobalt RAM_45230 IPR023747 Xanthine-guanine phosphoribosyltransferase RAM_45230 IPR029057 Phosphoribosyltransferase-like RAM_45230 IPR000836 Phosphoribosyltransferase domain RAM_45240 IPR025110 AMP-binding enzyme, C-terminal domain RAM_45240 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain RAM_45240 IPR042099 AMP-dependent synthetase-like superfamily RAM_45240 IPR011904 Acetate-CoA ligase RAM_45240 IPR020845 AMP-binding, conserved site RAM_45240 IPR000873 AMP-dependent synthetase/ligase RAM_45260 IPR005279 Dipeptide/tripeptide permease RAM_45260 IPR000109 Proton-dependent oligopeptide transporter family RAM_45260 IPR036259 MFS transporter superfamily RAM_45260 IPR020846 Major facilitator superfamily domain RAM_45260 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site RAM_45265 IPR023171 Na/H antiporter domain superfamily RAM_45265 IPR004670 Na+/H+ antiporter NhaA RAM_45275 IPR029058 Alpha/Beta hydrolase fold RAM_45275 IPR000073 Alpha/beta hydrolase fold-1 RAM_45275 IPR000639 Epoxide hydrolase-like RAM_45280 IPR002938 FAD-binding domain RAM_45280 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_45290 IPR009003 Peptidase S1, PA clan RAM_45290 IPR033116 Serine proteases, trypsin family, serine active site RAM_45290 IPR001940 Peptidase S1C RAM_45290 IPR003825 Colicin V production, CvpA RAM_45300 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE RAM_45300 IPR013740 Redoxin RAM_45300 IPR036249 Thioredoxin-like superfamily RAM_45300 IPR017937 Thioredoxin, conserved site RAM_45300 IPR013766 Thioredoxin domain RAM_45305 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RAM_45305 IPR004035 Endonuclease III, iron-sulphur binding site RAM_45305 IPR003265 HhH-GPD domain RAM_45305 IPR000445 Helix-hairpin-helix motif RAM_45305 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RAM_45305 IPR011257 DNA glycosylase RAM_45305 IPR004036 Endonuclease III-like, conserved site-2 RAM_45305 IPR005759 Endonuclease III RAM_45315 IPR012318 Crp-type HTH domain RAM_45315 IPR014710 RmlC-like jelly roll fold RAM_45315 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_45315 IPR018490 Cyclic nucleotide-binding-like RAM_45315 IPR000595 Cyclic nucleotide-binding domain RAM_45315 IPR036390 Winged helix DNA-binding domain superfamily RAM_45365 IPR019826 Carboxylesterase type B, active site RAM_45365 IPR002018 Carboxylesterase, type B RAM_45365 IPR029058 Alpha/Beta hydrolase fold RAM_45375 IPR001279 Metallo-beta-lactamase RAM_45375 IPR017782 Hydroxyacylglutathione hydrolase RAM_45375 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain RAM_45375 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain RAM_45375 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RAM_45410 IPR025723 Anion-transporting ATPase-like domain RAM_45410 IPR016300 Arsenical pump ATPase, ArsA/GET3 RAM_45410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45415 IPR010223 ATP binding protein MinD, bacterial-type RAM_45415 IPR025501 ATP binding protein MinD RAM_45415 IPR025669 AAA domain RAM_45420 IPR003482 Transcription factor WhiB RAM_45420 IPR034768 WhiB-like iron-sulfur binding domain RAM_45425 IPR012338 Beta-lactamase/transpeptidase-like RAM_45425 IPR001264 Glycosyl transferase, family 51 RAM_45425 IPR023346 Lysozyme-like domain superfamily RAM_45425 IPR036950 Penicillin binding protein transglycosylase domain RAM_45425 IPR031376 Penicillin-binding protein, OB-like domain RAM_45425 IPR001460 Penicillin-binding protein, transpeptidase RAM_45430 IPR038232 PknH-like extracellular domain superfamily RAM_45430 IPR026954 PknH-like extracellular domain RAM_45430 IPR011009 Protein kinase-like domain superfamily RAM_45430 IPR017441 Protein kinase, ATP binding site RAM_45430 IPR008271 Serine/threonine-protein kinase, active site RAM_45430 IPR000719 Protein kinase domain RAM_45435 IPR029052 Metallo-dependent phosphatase-like RAM_45435 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_45435 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RAM_45440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_45440 IPR025714 Methyltransferase domain RAM_45440 IPR026669 Arsenite methyltransferase-like RAM_45445 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RAM_45445 IPR029058 Alpha/Beta hydrolase fold RAM_45445 IPR011042 Six-bladed beta-propeller, TolB-like RAM_45475 IPR029044 Nucleotide-diphospho-sugar transferases RAM_45475 IPR001173 Glycosyltransferase 2-like RAM_45480 IPR013815 ATP-grasp fold, subdomain 1 RAM_45480 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RAM_45480 IPR011761 ATP-grasp fold RAM_45480 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase RAM_45480 IPR011054 Rudiment single hybrid motif RAM_45480 IPR016185 Pre-ATP-grasp domain superfamily RAM_45490 IPR031730 Carbamoyltransferase, C-terminal RAM_45490 IPR038152 Carbamoyltransferase, C-terminal domain superfamily RAM_45490 IPR003696 Carbamoyltransferase RAM_45505 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_45505 IPR010107 Glutamate decarboxylase RAM_45505 IPR002129 Pyridoxal phosphate-dependent decarboxylase RAM_45505 IPR015424 Pyridoxal phosphate-dependent transferase RAM_45510 IPR023067 DNA protection during starvation protein, gammaproteobacteria RAM_45510 IPR023188 DNA-binding protein Dps, conserved site RAM_45510 IPR002177 DNA-binding protein Dps RAM_45510 IPR008331 Ferritin/DPS protein domain RAM_45510 IPR012347 Ferritin-like RAM_45510 IPR009078 Ferritin-like superfamily RAM_45515 IPR015946 K homology domain-like, alpha/beta RAM_45515 IPR019953 Organic hydroperoxide resistance protein famiy RAM_45515 IPR003718 OsmC/Ohr family RAM_45515 IPR036102 OsmC/Ohr superfamily RAM_45520 IPR029039 Flavoprotein-like superfamily RAM_45520 IPR005025 NADPH-dependent FMN reductase-like RAM_45525 IPR013094 Alpha/beta hydrolase fold-3 RAM_45525 IPR029058 Alpha/Beta hydrolase fold RAM_45540 IPR036259 MFS transporter superfamily RAM_45540 IPR004638 Drug resistance transporter EmrB-like RAM_45540 IPR011701 Major facilitator superfamily RAM_45540 IPR020846 Major facilitator superfamily domain RAM_45555 IPR036025 tRNA-splicing ligase RtcB-like superfamily RAM_45555 IPR001233 tRNA-splicing ligase, RtcB RAM_45570 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RAM_45570 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site RAM_45570 IPR012080 Aspartate-semialdehyde dehydrogenase RAM_45570 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type RAM_45570 IPR036291 NAD(P)-binding domain superfamily RAM_45570 IPR002942 RNA-binding S4 domain RAM_45570 IPR000534 Semialdehyde dehydrogenase, NAD-binding RAM_45575 IPR027795 CASTOR, ACT domain RAM_45575 IPR018042 Aspartate kinase, conserved site RAM_45575 IPR001048 Aspartate/glutamate/uridylate kinase RAM_45575 IPR041740 Aspartokinase catalytic domain RAM_45575 IPR002912 ACT domain RAM_45575 IPR036393 Acetylglutamate kinase-like superfamily RAM_45575 IPR001341 Aspartate kinase RAM_45575 IPR005260 Aspartate kinase, monofunctional class RAM_45590 IPR039371 LeuA, N-terminal catalytic TIM barrel domain RAM_45590 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RAM_45590 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RAM_45590 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily RAM_45590 IPR000891 Pyruvate carboxyltransferase RAM_45590 IPR013785 Aldolase-type TIM barrel RAM_45590 IPR005668 2-isopropylmalate synthase RAM_45620 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_45620 IPR005119 LysR, substrate-binding RAM_45620 IPR000847 Transcription regulator HTH, LysR RAM_45620 IPR036390 Winged helix DNA-binding domain superfamily RAM_45625 IPR000620 EamA domain RAM_45630 IPR032816 SNARE associated Golgi protein RAM_45630 IPR032818 DedA family RAM_45640 IPR011008 Dimeric alpha-beta barrel RAM_45640 IPR005545 YCII-related RAM_45645 IPR007627 RNA polymerase sigma-70 region 2 RAM_45645 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_45645 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_45645 IPR013325 RNA polymerase sigma factor, region 2 RAM_45645 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_45645 IPR014284 RNA polymerase sigma-70 like domain RAM_45645 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_45650 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45650 IPR017871 ABC transporter, conserved site RAM_45650 IPR003439 ABC transporter-like RAM_45650 IPR003593 AAA+ ATPase domain RAM_45650 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_45655 IPR003593 AAA+ ATPase domain RAM_45655 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RAM_45655 IPR017871 ABC transporter, conserved site RAM_45655 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45655 IPR003439 ABC transporter-like RAM_45670 IPR039424 Solute-binding protein family 5 RAM_45670 IPR000914 Solute-binding protein family 5 domain RAM_45670 IPR023765 Solute-binding protein family 5, conserved site RAM_45670 IPR030678 Peptide/nickel binding protein, MppA-type RAM_45680 IPR001173 Glycosyltransferase 2-like RAM_45680 IPR039528 DPM1-like RAM_45680 IPR029044 Nucleotide-diphospho-sugar transferases RAM_45700 IPR029044 Nucleotide-diphospho-sugar transferases RAM_45700 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA RAM_45700 IPR001173 Glycosyltransferase 2-like RAM_45710 IPR038200 GW domain superfamily RAM_45710 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain RAM_45710 IPR025987 GW domain RAM_45715 IPR034137 RecR, TOPRIM domain RAM_45715 IPR023628 Recombination protein RecR, C4-type zinc finger RAM_45715 IPR023627 Recombination protein RecR RAM_45715 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RAM_45715 IPR000093 DNA recombination protein RecR RAM_45715 IPR015967 Recombination protein RecR, conserved site RAM_45715 IPR006171 TOPRIM domain RAM_45720 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily RAM_45720 IPR004401 Nucleoid-associated protein YbaB/EbfC family RAM_45730 IPR002577 Helix-turn-helix, HxlR type RAM_45730 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_45730 IPR036390 Winged helix DNA-binding domain superfamily RAM_45735 IPR019920 F420-binding domain, putative RAM_45735 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative RAM_45735 IPR012349 FMN-binding split barrel RAM_45740 IPR036397 Ribonuclease H superfamily RAM_45740 IPR012337 Ribonuclease H-like superfamily RAM_45740 IPR001584 Integrase, catalytic core RAM_45740 IPR025948 HTH-like domain RAM_45745 IPR002514 Transposase IS3/IS911family RAM_45745 IPR009057 Homeobox-like domain superfamily RAM_45750 IPR012763 DNA polymerase III, subunit gamma/ tau RAM_45750 IPR003593 AAA+ ATPase domain RAM_45750 IPR022754 DNA polymerase III, gamma subunit, domain III RAM_45750 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RAM_45750 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45785 IPR003439 ABC transporter-like RAM_45785 IPR017871 ABC transporter, conserved site RAM_45785 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45785 IPR003593 AAA+ ATPase domain RAM_45790 IPR035906 MetI-like superfamily RAM_45790 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_45800 IPR038731 Glycosyltransferase RgtA/B/C/D-like RAM_45805 IPR005467 Histidine kinase domain RAM_45805 IPR003660 HAMP domain RAM_45805 IPR003594 Histidine kinase/HSP90-like ATPase RAM_45805 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_45805 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RAM_45805 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RAM_45805 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RAM_45810 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_45810 IPR039420 Transcriptional regulatory protein WalR-like RAM_45810 IPR001789 Signal transduction response regulator, receiver domain RAM_45810 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_45810 IPR011006 CheY-like superfamily RAM_45820 IPR016381 Signal transduction histidine kinase, DegS RAM_45820 IPR005467 Histidine kinase domain RAM_45820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_45820 IPR003594 Histidine kinase/HSP90-like ATPase RAM_45820 IPR008595 Sensor DegS RAM_45820 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_45825 IPR001789 Signal transduction response regulator, receiver domain RAM_45825 IPR016032 Signal transduction response regulator, C-terminal effector RAM_45825 IPR000792 Transcription regulator LuxR, C-terminal RAM_45825 IPR011006 CheY-like superfamily RAM_45840 IPR001647 DNA-binding HTH domain, TetR-type RAM_45840 IPR009057 Homeobox-like domain superfamily RAM_45840 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) RAM_45840 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_45845 IPR036291 NAD(P)-binding domain superfamily RAM_45845 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_45845 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC RAM_45845 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_45845 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site RAM_45845 IPR041040 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain RAM_45845 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_45850 IPR029058 Alpha/Beta hydrolase fold RAM_45850 IPR000801 Putative esterase RAM_45850 IPR013207 LGFP RAM_45865 IPR000719 Protein kinase domain RAM_45865 IPR011009 Protein kinase-like domain superfamily RAM_45865 IPR005543 PASTA domain RAM_45865 IPR008271 Serine/threonine-protein kinase, active site RAM_45865 IPR017441 Protein kinase, ATP binding site RAM_45875 IPR001932 PPM-type phosphatase domain RAM_45875 IPR036457 PPM-type phosphatase domain superfamily RAM_45875 IPR015655 Protein phosphatase 2C family RAM_45890 IPR002543 FtsK domain RAM_45890 IPR023839 Firmicutes EssC, C-terminal RAM_45890 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_45925 IPR019079 Capsule synthesis protein, CapA RAM_45935 IPR013100 Limonene-1,2-epoxide hydrolase RAM_45935 IPR032710 NTF2-like domain superfamily RAM_45940 IPR003819 TauD/TfdA-like domain RAM_45940 IPR042098 Taurine dioxygenase TauD-like superfamily RAM_45960 IPR036291 NAD(P)-binding domain superfamily RAM_45960 IPR008030 NmrA-like domain RAM_45970 IPR016192 APOBEC/CMP deaminase, zinc-binding RAM_45970 IPR016193 Cytidine deaminase-like RAM_45970 IPR028883 tRNA-specific adenosine deaminase RAM_45970 IPR002125 Cytidine and deoxycytidylate deaminase domain RAM_45985 IPR006311 Twin-arginine translocation pathway, signal sequence RAM_45985 IPR008475 Bacterial phospholipase C, C-terminal domain RAM_45985 IPR017767 Bacterial phospholipase C, phosphocholine-specific RAM_45985 IPR007312 Phosphoesterase RAM_45985 IPR017850 Alkaline-phosphatase-like, core domain superfamily RAM_45995 IPR010371 Uncharacterised protein family UPF0303 RAM_45995 IPR005624 Haem-degrading RAM_45995 IPR038084 GlcG-like domain superfamily RAM_46005 IPR006195 Aminoacyl-tRNA synthetase, class II RAM_46005 IPR012675 Beta-grasp domain superfamily RAM_46005 IPR036621 Anticodon-binding domain superfamily RAM_46005 IPR004154 Anticodon-binding RAM_46005 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RAM_46005 IPR002320 Threonine-tRNA ligase, class IIa RAM_46005 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily RAM_46005 IPR004095 TGS RAM_46005 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RAM_46005 IPR033728 Threonine-tRNA ligase catalytic core domain RAM_46005 IPR012676 TGS-like RAM_46010 IPR000551 MerR-type HTH domain RAM_46010 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain RAM_46010 IPR012925 TipAS antibiotic-recognition domain RAM_46010 IPR009061 Putative DNA-binding domain superfamily RAM_46015 IPR035906 MetI-like superfamily RAM_46015 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_46020 IPR035906 MetI-like superfamily RAM_46020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_46025 IPR017871 ABC transporter, conserved site RAM_46025 IPR003439 ABC transporter-like RAM_46025 IPR013611 Transport-associated OB, type 2 RAM_46025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46025 IPR008995 Molybdate/tungstate binding, C-terminal RAM_46025 IPR003593 AAA+ ATPase domain RAM_46035 IPR011711 GntR, C-terminal RAM_46035 IPR036390 Winged helix DNA-binding domain superfamily RAM_46035 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_46035 IPR000524 Transcription regulator HTH, GntR RAM_46035 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_46035 IPR000485 AsnC-type HTH domain RAM_46040 IPR002220 DapA-like RAM_46040 IPR020624 Schiff base-forming aldolase, conserved site RAM_46040 IPR020625 Schiff base-forming aldolase, active site RAM_46040 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RAM_46040 IPR013785 Aldolase-type TIM barrel RAM_46055 IPR029066 PLP-binding barrel RAM_46055 IPR002986 Diaminopimelate decarboxylase, LysA RAM_46055 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RAM_46055 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RAM_46055 IPR000183 Ornithine/DAP/Arg decarboxylase RAM_46055 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RAM_46065 IPR000212 DNA helicase, UvrD/REP type RAM_46065 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46065 IPR014016 UvrD-like helicase, ATP-binding domain RAM_46065 IPR027785 UvrD-like helicase C-terminal domain RAM_46095 IPR000683 Oxidoreductase, N-terminal RAM_46095 IPR004104 Oxidoreductase, C-terminal RAM_46095 IPR036291 NAD(P)-binding domain superfamily RAM_46105 IPR013785 Aldolase-type TIM barrel RAM_46105 IPR018517 tRNA-dihydrouridine synthase, conserved site RAM_46105 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal RAM_46105 IPR035587 DUS-like, FMN-binding domain RAM_46105 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 RAM_46105 IPR001269 tRNA-dihydrouridine synthase RAM_46110 IPR002241 Glycoside hydrolase, family 27 RAM_46110 IPR000111 Glycoside hydrolase family 27/36, conserved site RAM_46110 IPR013780 Glycosyl hydrolase, all-beta RAM_46110 IPR013785 Aldolase-type TIM barrel RAM_46110 IPR017853 Glycoside hydrolase superfamily RAM_46110 IPR041233 Alpha galactosidase, C-terminal beta sandwich domain RAM_46115 IPR000772 Ricin B, lectin domain RAM_46115 IPR035992 Ricin B-like lectins RAM_46115 IPR017853 Glycoside hydrolase superfamily RAM_46115 IPR031158 Glycosyl hydrolases family 10, active site RAM_46115 IPR001000 Glycoside hydrolase family 10 domain RAM_46125 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RAM_46125 IPR000524 Transcription regulator HTH, GntR RAM_46125 IPR011663 UbiC transcription regulator-associated RAM_46125 IPR036390 Winged helix DNA-binding domain superfamily RAM_46125 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_46130 IPR005502 ADP-ribosylation/Crystallin J1 RAM_46130 IPR036705 ADP-ribosylation/Crystallin J1 superfamily RAM_46135 IPR002139 Ribokinase/fructokinase RAM_46135 IPR011611 Carbohydrate kinase PfkB RAM_46135 IPR011877 Ribokinase RAM_46135 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_46135 IPR029056 Ribokinase-like RAM_46150 IPR029058 Alpha/Beta hydrolase fold RAM_46150 IPR000639 Epoxide hydrolase-like RAM_46150 IPR000073 Alpha/beta hydrolase fold-1 RAM_46155 IPR000086 NUDIX hydrolase domain RAM_46155 IPR015797 NUDIX hydrolase-like domain superfamily RAM_46155 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 RAM_46160 IPR029787 Nucleotide cyclase RAM_46160 IPR001789 Signal transduction response regulator, receiver domain RAM_46160 IPR011006 CheY-like superfamily RAM_46160 IPR000160 GGDEF domain RAM_46170 IPR004474 Cell envelope-related transcriptional attenuator domain RAM_46170 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU RAM_46175 IPR038078 PhoU-like domain superfamily RAM_46175 IPR026022 PhoU domain RAM_46175 IPR028366 Phosphate transport system protein PhoU RAM_46180 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46180 IPR005670 Phosphate transport system permease protein 1 RAM_46180 IPR015850 ABC transporter, phosphate import, PstB RAM_46180 IPR003439 ABC transporter-like RAM_46180 IPR003593 AAA+ ATPase domain RAM_46180 IPR017871 ABC transporter, conserved site RAM_46185 IPR035906 MetI-like superfamily RAM_46185 IPR005672 Phosphate transport system permease protein PstA RAM_46185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_46190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_46190 IPR035906 MetI-like superfamily RAM_46190 IPR011864 Phosphate ABC transporter, permease protein PstC RAM_46195 IPR024370 PBP domain RAM_46195 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS RAM_46200 IPR000182 GNAT domain RAM_46200 IPR016181 Acyl-CoA N-acyltransferase RAM_46200 IPR017813 Mycothiol acetyltransferase RAM_46205 IPR001867 OmpR/PhoB-type DNA-binding domain RAM_46205 IPR016032 Signal transduction response regulator, C-terminal effector RAM_46205 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_46205 IPR039420 Transcriptional regulatory protein WalR-like RAM_46225 IPR001763 Rhodanese-like domain RAM_46225 IPR036873 Rhodanese-like domain superfamily RAM_46225 IPR001307 Thiosulphate sulfurtransferase, conserved site RAM_46230 IPR008969 Carboxypeptidase-like, regulatory domain superfamily RAM_46230 IPR010814 Protein of unknown function DUF1416 RAM_46240 IPR022939 Uncharacterised protein family UPF0678 RAM_46240 IPR014878 Domain of unknown function DUF1794 RAM_46240 IPR012674 Calycin RAM_46245 IPR010016 KipI family RAM_46245 IPR003833 Carboxyltransferase domain, subdomain C and D RAM_46245 IPR029000 Cyclophilin-like domain superfamily RAM_46250 IPR003778 Carboxyltransferase domain, subdomain A and B RAM_46250 IPR029000 Cyclophilin-like domain superfamily RAM_46290 IPR036291 NAD(P)-binding domain superfamily RAM_46290 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RAM_46290 IPR022694 3-hydroxyacyl-CoA dehydrogenase RAM_46290 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RAM_46290 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RAM_46290 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RAM_46300 IPR017871 ABC transporter, conserved site RAM_46300 IPR003439 ABC transporter-like RAM_46300 IPR003593 AAA+ ATPase domain RAM_46300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46315 IPR036291 NAD(P)-binding domain superfamily RAM_46315 IPR000683 Oxidoreductase, N-terminal RAM_46315 IPR004104 Oxidoreductase, C-terminal RAM_46330 IPR000352 Peptide chain release factor class I RAM_46335 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase RAM_46335 IPR036921 PurM-like, N-terminal domain superfamily RAM_46335 IPR016188 PurM-like, N-terminal domain RAM_46335 IPR036676 PurM-like, C-terminal domain superfamily RAM_46335 IPR010918 PurM-like, C-terminal domain RAM_46340 IPR029057 Phosphoribosyltransferase-like RAM_46340 IPR035584 Amidophosphoribosyltransferase, N-terminal RAM_46340 IPR005854 Amidophosphoribosyltransferase RAM_46340 IPR000836 Phosphoribosyltransferase domain RAM_46340 IPR029055 Nucleophile aminohydrolases, N-terminal RAM_46340 IPR017932 Glutamine amidotransferase type 2 domain RAM_46375 IPR002053 Glycoside hydrolase, family 25 RAM_46375 IPR018077 Glycoside hydrolase, family 25 subgroup RAM_46375 IPR017853 Glycoside hydrolase superfamily RAM_46375 IPR008270 Glycoside hydrolase, family 25, active site RAM_46380 IPR002053 Glycoside hydrolase, family 25 RAM_46380 IPR017853 Glycoside hydrolase superfamily RAM_46380 IPR008270 Glycoside hydrolase, family 25, active site RAM_46380 IPR018077 Glycoside hydrolase, family 25 subgroup RAM_46400 IPR036921 PurM-like, N-terminal domain superfamily RAM_46400 IPR036676 PurM-like, C-terminal domain superfamily RAM_46400 IPR010918 PurM-like, C-terminal domain RAM_46400 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain RAM_46400 IPR010074 Phosphoribosylformylglycinamidine subunit PurL RAM_46400 IPR016188 PurM-like, N-terminal domain RAM_46405 IPR039421 Type I protein exporter RAM_46405 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46405 IPR017871 ABC transporter, conserved site RAM_46405 IPR003439 ABC transporter-like RAM_46405 IPR011527 ABC transporter type 1, transmembrane domain RAM_46405 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_46405 IPR003593 AAA+ ATPase domain RAM_46410 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46410 IPR011527 ABC transporter type 1, transmembrane domain RAM_46410 IPR003439 ABC transporter-like RAM_46410 IPR011917 ABC transporter, lipid A export, MsbA RAM_46410 IPR017871 ABC transporter, conserved site RAM_46410 IPR039421 Type I protein exporter RAM_46410 IPR003593 AAA+ ATPase domain RAM_46410 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_46415 IPR017926 Glutamine amidotransferase RAM_46415 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ RAM_46415 IPR029062 Class I glutamine amidotransferase-like RAM_46420 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily RAM_46420 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS RAM_46425 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RAM_46425 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_46425 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RAM_46425 IPR012132 Glucose-methanol-choline oxidoreductase RAM_46425 IPR027424 Glucose Oxidase, domain 2 RAM_46430 IPR016161 Aldehyde/histidinol dehydrogenase RAM_46430 IPR016163 Aldehyde dehydrogenase, C-terminal RAM_46430 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RAM_46430 IPR015590 Aldehyde dehydrogenase domain RAM_46430 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RAM_46430 IPR016162 Aldehyde dehydrogenase, N-terminal RAM_46445 IPR016130 Protein-tyrosine phosphatase, active site RAM_46445 IPR000387 Tyrosine specific protein phosphatases domain RAM_46445 IPR026893 Tyrosine/serine-protein phosphatase IphP-type RAM_46445 IPR029021 Protein-tyrosine phosphatase-like RAM_46465 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase RAM_46465 IPR028923 SAICAR synthetase/ADE2, N-terminal RAM_46465 IPR018236 SAICAR synthetase, conserved site RAM_46480 IPR017871 ABC transporter, conserved site RAM_46480 IPR003593 AAA+ ATPase domain RAM_46480 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RAM_46480 IPR003439 ABC transporter-like RAM_46480 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46485 IPR035906 MetI-like superfamily RAM_46485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_46485 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RAM_46490 IPR018313 Solute-binding protein family 3, conserved site RAM_46490 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RAM_46495 IPR018313 Solute-binding protein family 3, conserved site RAM_46495 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RAM_46500 IPR018313 Solute-binding protein family 3, conserved site RAM_46500 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RAM_46505 IPR024083 Fumarase/histidase, N-terminal RAM_46505 IPR020557 Fumarate lyase, conserved site RAM_46505 IPR022761 Fumarate lyase, N-terminal RAM_46505 IPR000362 Fumarate lyase family RAM_46505 IPR004769 Adenylosuccinate lyase RAM_46505 IPR008948 L-Aspartase-like RAM_46505 IPR019468 Adenylosuccinate lyase C-terminal RAM_46510 IPR029065 Enolase C-terminal domain-like RAM_46510 IPR036849 Enolase-like, C-terminal domain superfamily RAM_46510 IPR029017 Enolase-like, N-terminal RAM_46510 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site RAM_46510 IPR023592 D-galactonate dehydratase RAM_46510 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal RAM_46510 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain RAM_46510 IPR034593 Mandelate racemase-like RAM_46515 IPR036291 NAD(P)-binding domain superfamily RAM_46515 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_46515 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_46525 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_46525 IPR000524 Transcription regulator HTH, GntR RAM_46525 IPR036390 Winged helix DNA-binding domain superfamily RAM_46525 IPR011711 GntR, C-terminal RAM_46525 IPR008920 Transcription regulator FadR/GntR, C-terminal RAM_46545 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_46545 IPR023603 Threonine aldolase RAM_46545 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase RAM_46545 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_46545 IPR015424 Pyridoxal phosphate-dependent transferase RAM_46550 IPR036412 HAD-like superfamily RAM_46550 IPR037512 Phosphoglycolate phosphatase, prokaryotic RAM_46550 IPR006439 HAD hydrolase, subfamily IA RAM_46550 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic RAM_46550 IPR023214 HAD superfamily RAM_46550 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RAM_46550 IPR041492 Haloacid dehalogenase-like hydrolase RAM_46550 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RAM_46565 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_46565 IPR015424 Pyridoxal phosphate-dependent transferase RAM_46565 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RAM_46565 IPR004839 Aminotransferase, class I/classII RAM_46565 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_46570 IPR023346 Lysozyme-like domain superfamily RAM_46570 IPR008258 Transglycosylase SLT domain 1 RAM_46600 IPR000115 Phosphoribosylglycinamide synthetase RAM_46600 IPR013815 ATP-grasp fold, subdomain 1 RAM_46600 IPR020559 Phosphoribosylglycinamide synthetase, conserved site RAM_46600 IPR011054 Rudiment single hybrid motif RAM_46600 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal RAM_46600 IPR011761 ATP-grasp fold RAM_46600 IPR020560 Phosphoribosylglycinamide synthetase, C-domain RAM_46600 IPR016185 Pre-ATP-grasp domain superfamily RAM_46600 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily RAM_46600 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RAM_46605 IPR030395 Glycerophosphodiester phosphodiesterase domain RAM_46605 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily RAM_46630 IPR029056 Ribokinase-like RAM_46630 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_46630 IPR002139 Ribokinase/fructokinase RAM_46630 IPR011877 Ribokinase RAM_46630 IPR011611 Carbohydrate kinase PfkB RAM_46635 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RAM_46635 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RAM_46635 IPR032677 GTP cyclohydrolase II RAM_46635 IPR000926 GTP cyclohydrolase II, RibA RAM_46635 IPR036144 RibA-like superfamily RAM_46635 IPR016299 Riboflavin biosynthesis protein RibBA RAM_46640 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family RAM_46640 IPR020846 Major facilitator superfamily domain RAM_46640 IPR036259 MFS transporter superfamily RAM_46640 IPR005829 Sugar transporter, conserved site RAM_46640 IPR011701 Major facilitator superfamily RAM_46645 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria RAM_46645 IPR006153 Cation/H+ exchanger RAM_46645 IPR018422 Cation/H+ exchanger, CPA1 family RAM_46645 IPR038770 Sodium/solute symporter superfamily RAM_46650 IPR011251 Luciferase-like domain RAM_46650 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c RAM_46650 IPR036661 Luciferase-like domain superfamily RAM_46660 IPR042109 Adenylosuccinate synthetase, domain 1 RAM_46660 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46660 IPR001114 Adenylosuccinate synthetase RAM_46660 IPR042111 Adenylosuccinate synthetase, domain 3 RAM_46660 IPR018220 Adenylosuccinate synthase, GTP-binding site RAM_46660 IPR033128 Adenylosuccinate synthase, active site RAM_46660 IPR042110 Adenylosuccinate synthetase, domain 2 RAM_46675 IPR010610 Domain of unknown function DUF1205 RAM_46695 IPR001789 Signal transduction response regulator, receiver domain RAM_46695 IPR029787 Nucleotide cyclase RAM_46695 IPR000160 GGDEF domain RAM_46695 IPR011006 CheY-like superfamily RAM_46700 IPR009057 Homeobox-like domain superfamily RAM_46700 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_46700 IPR001647 DNA-binding HTH domain, TetR-type RAM_46700 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_46720 IPR013785 Aldolase-type TIM barrel RAM_46720 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype RAM_46720 IPR000771 Fructose-bisphosphate aldolase, class-II RAM_46730 IPR036812 NADP-dependent oxidoreductase domain superfamily RAM_46730 IPR023210 NADP-dependent oxidoreductase domain RAM_46730 IPR020471 Aldo/keto reductase RAM_46735 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_46735 IPR036291 NAD(P)-binding domain superfamily RAM_46750 IPR020946 Flavin monooxygenase-like RAM_46750 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_46760 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_46760 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_46760 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_46760 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_46760 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_46760 IPR000951 Phthalate dioxygenase reductase RAM_46760 IPR012675 Beta-grasp domain superfamily RAM_46760 IPR017938 Riboflavin synthase-like beta-barrel RAM_46780 IPR003764 N-acetylglucosamine-6-phosphate deacetylase RAM_46780 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_46780 IPR006680 Amidohydrolase-related RAM_46780 IPR032466 Metal-dependent hydrolase RAM_46790 IPR032816 SNARE associated Golgi protein RAM_46790 IPR032818 DedA family RAM_46795 IPR029060 PIN-like domain superfamily RAM_46795 IPR002716 PIN domain RAM_46795 IPR022907 VapC family RAM_46800 IPR036165 YefM-like superfamily RAM_46805 IPR036318 FAD-binding, type PCMH-like superfamily RAM_46805 IPR016164 FAD-linked oxidase-like, C-terminal RAM_46805 IPR004113 FAD-linked oxidase, C-terminal RAM_46805 IPR004490 Glycolate oxidase subunit GlcD RAM_46805 IPR006094 FAD linked oxidase, N-terminal RAM_46805 IPR016166 FAD-binding domain, PCMH-type RAM_46805 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 RAM_46810 IPR019920 F420-binding domain, putative RAM_46810 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative RAM_46810 IPR012349 FMN-binding split barrel RAM_46820 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_46820 IPR020846 Major facilitator superfamily domain RAM_46820 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RAM_46820 IPR005829 Sugar transporter, conserved site RAM_46820 IPR011701 Major facilitator superfamily RAM_46820 IPR036259 MFS transporter superfamily RAM_46820 IPR036390 Winged helix DNA-binding domain superfamily RAM_46830 IPR032818 DedA family RAM_46830 IPR032816 SNARE associated Golgi protein RAM_46840 IPR027443 Isopenicillin N synthase-like RAM_46840 IPR005123 Oxoglutarate/iron-dependent dioxygenase RAM_46840 IPR026992 Non-haem dioxygenase N-terminal domain RAM_46845 IPR036291 NAD(P)-binding domain superfamily RAM_46845 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_46845 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_46850 IPR000764 Uridine kinase-like RAM_46850 IPR026008 Uridine kinase RAM_46850 IPR006083 Phosphoribulokinase/uridine kinase RAM_46850 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46855 IPR030877 Sulfofructose kinase RAM_46855 IPR002139 Ribokinase/fructokinase RAM_46855 IPR011611 Carbohydrate kinase PfkB RAM_46855 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_46855 IPR029056 Ribokinase-like RAM_46860 IPR003593 AAA+ ATPase domain RAM_46860 IPR003439 ABC transporter-like RAM_46860 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46865 IPR001851 ABC transporter, permease RAM_46870 IPR025997 Periplasmic binding protein RAM_46870 IPR028082 Periplasmic binding protein-like I RAM_46875 IPR023588 Transcription regulator HTH, PurR RAM_46875 IPR000843 LacI-type HTH domain RAM_46875 IPR028082 Periplasmic binding protein-like I RAM_46875 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_46880 IPR028082 Periplasmic binding protein-like I RAM_46880 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RAM_46880 IPR000843 LacI-type HTH domain RAM_46880 IPR006377 Catabolite control protein A RAM_46890 IPR006657 Molybdopterin dinucleotide-binding domain RAM_46890 IPR006656 Molybdopterin oxidoreductase RAM_46890 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RAM_46890 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RAM_46890 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RAM_46890 IPR009010 Aspartate decarboxylase-like domain superfamily RAM_46920 IPR013325 RNA polymerase sigma factor, region 2 RAM_46920 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_46920 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_46920 IPR032710 NTF2-like domain superfamily RAM_46920 IPR014284 RNA polymerase sigma-70 like domain RAM_46920 IPR037401 SnoaL-like domain RAM_46920 IPR039425 RNA polymerase sigma-70 like RAM_46920 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_46920 IPR014305 RNA polymerase sigma-G type, actinobacteria RAM_46920 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_46920 IPR007627 RNA polymerase sigma-70 region 2 RAM_46925 IPR004467 Orotate phosphoribosyl transferase domain RAM_46925 IPR000836 Phosphoribosyltransferase domain RAM_46925 IPR029057 Phosphoribosyltransferase-like RAM_46925 IPR023031 Orotate phosphoribosyltransferase RAM_46935 IPR017871 ABC transporter, conserved site RAM_46935 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46935 IPR003439 ABC transporter-like RAM_46935 IPR003593 AAA+ ATPase domain RAM_46940 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_46940 IPR036291 NAD(P)-binding domain superfamily RAM_46955 IPR019489 Clp ATPase, C-terminal RAM_46955 IPR028299 ClpA/B, conserved site 2 RAM_46955 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_46955 IPR041546 ClpA/ClpB, AAA lid domain RAM_46955 IPR004176 Clp, N-terminal RAM_46955 IPR018368 ClpA/B, conserved site 1 RAM_46955 IPR003593 AAA+ ATPase domain RAM_46955 IPR001270 ClpA/B family RAM_46955 IPR036628 Clp, N-terminal domain superfamily RAM_46955 IPR003959 ATPase, AAA-type, core RAM_46955 IPR017730 Chaperonin ClpB RAM_46970 IPR017938 Riboflavin synthase-like beta-barrel RAM_46970 IPR001433 Oxidoreductase FAD/NAD(P)-binding RAM_46970 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_46970 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RAM_46970 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_46970 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_46970 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_46970 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_46970 IPR012675 Beta-grasp domain superfamily RAM_46970 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RAM_46975 IPR012675 Beta-grasp domain superfamily RAM_46975 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site RAM_46975 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RAM_46975 IPR036010 2Fe-2S ferredoxin-like superfamily RAM_46975 IPR017938 Riboflavin synthase-like beta-barrel RAM_46975 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RAM_46975 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RAM_46975 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RAM_46975 IPR001433 Oxidoreductase FAD/NAD(P)-binding RAM_46975 IPR017927 FAD-binding domain, ferredoxin reductase-type RAM_46980 IPR002925 Dienelactone hydrolase RAM_46980 IPR029058 Alpha/Beta hydrolase fold RAM_46985 IPR014756 Immunoglobulin E-set RAM_46985 IPR004302 Cellulose/chitin-binding protein, N-terminal RAM_46995 IPR000551 MerR-type HTH domain RAM_46995 IPR009061 Putative DNA-binding domain superfamily RAM_47000 IPR008971 HSP40/DnaJ peptide-binding RAM_47000 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily RAM_47000 IPR012724 Chaperone DnaJ RAM_47000 IPR002939 Chaperone DnaJ, C-terminal RAM_47000 IPR001623 DnaJ domain RAM_47000 IPR018253 DnaJ domain, conserved site RAM_47000 IPR036869 Chaperone J-domain superfamily RAM_47000 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RAM_47005 IPR013805 GrpE nucleotide exchange factor, coiled-coil RAM_47005 IPR000740 GrpE nucleotide exchange factor RAM_47005 IPR009012 GrpE nucleotide exchange factor, head RAM_47010 IPR013126 Heat shock protein 70 family RAM_47010 IPR012725 Chaperone DnaK RAM_47010 IPR018181 Heat shock protein 70, conserved site RAM_47010 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RAM_47010 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily RAM_47020 IPR036610 PEBP-like superfamily RAM_47020 IPR008914 Phosphatidylethanolamine-binding protein RAM_47020 IPR005247 YbhB/YbcL RAM_47045 IPR036197 NarG-like superfamily RAM_47045 IPR023234 NarG-like domain RAM_47045 IPR009051 Alpha-helical ferredoxin RAM_47045 IPR004017 Cysteine-rich domain RAM_47045 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RAM_47045 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RAM_47060 IPR014044 CAP domain RAM_47060 IPR014258 CAP domain, YkwD-like RAM_47060 IPR035940 CAP superfamily RAM_47075 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_47075 IPR002938 FAD-binding domain RAM_47080 IPR033704 dUTPase, trimeric RAM_47080 IPR036157 dUTPase-like superfamily RAM_47080 IPR029054 dUTPase-like RAM_47080 IPR011962 dCTP deaminase RAM_47095 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_47095 IPR013325 RNA polymerase sigma factor, region 2 RAM_47095 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_47095 IPR011990 Tetratricopeptide-like helical domain superfamily RAM_47095 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_47095 IPR014284 RNA polymerase sigma-70 like domain RAM_47095 IPR007627 RNA polymerase sigma-70 region 2 RAM_47100 IPR011008 Dimeric alpha-beta barrel RAM_47100 IPR005545 YCII-related RAM_47105 IPR036396 Cytochrome P450 superfamily RAM_47105 IPR017972 Cytochrome P450, conserved site RAM_47105 IPR002397 Cytochrome P450, B-class RAM_47105 IPR001128 Cytochrome P450 RAM_47130 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RAM_47130 IPR029052 Metallo-dependent phosphatase-like RAM_47130 IPR006179 5'-Nucleotidase/apyrase RAM_47135 IPR000073 Alpha/beta hydrolase fold-1 RAM_47135 IPR000089 Biotin/lipoyl attachment RAM_47135 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RAM_47135 IPR011053 Single hybrid motif RAM_47135 IPR029058 Alpha/Beta hydrolase fold RAM_47140 IPR000683 Oxidoreductase, N-terminal RAM_47140 IPR036291 NAD(P)-binding domain superfamily RAM_47140 IPR004104 Oxidoreductase, C-terminal RAM_47155 IPR036895 Uracil-DNA glycosylase-like domain superfamily RAM_47155 IPR015637 G/U mismatch-specific DNA glycosylase RAM_47155 IPR005122 Uracil-DNA glycosylase-like RAM_47155 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial RAM_47160 IPR001789 Signal transduction response regulator, receiver domain RAM_47160 IPR016032 Signal transduction response regulator, C-terminal effector RAM_47160 IPR000792 Transcription regulator LuxR, C-terminal RAM_47160 IPR011006 CheY-like superfamily RAM_47165 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RAM_47165 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RAM_47165 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain RAM_47165 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RAM_47165 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RAM_47165 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RAM_47165 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RAM_47175 IPR011701 Major facilitator superfamily RAM_47175 IPR020846 Major facilitator superfamily domain RAM_47175 IPR036259 MFS transporter superfamily RAM_47195 IPR020818 GroES chaperonin family RAM_47195 IPR037124 GroES chaperonin superfamily RAM_47195 IPR011032 GroES-like superfamily RAM_47195 IPR018369 Chaperonin GroES, conserved site RAM_47220 IPR003439 ABC transporter-like RAM_47220 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_47220 IPR017871 ABC transporter, conserved site RAM_47220 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RAM_47220 IPR003593 AAA+ ATPase domain RAM_47225 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RAM_47225 IPR035906 MetI-like superfamily RAM_47225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RAM_47230 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RAM_47230 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter RAM_47230 IPR018313 Solute-binding protein family 3, conserved site RAM_47230 IPR001320 Ionotropic glutamate receptor RAM_47235 IPR007302 Circularly permuted ATPgrasp domain RAM_47235 IPR016450 Uncharacterised conserved protein UCP005522 RAM_47245 IPR038765 Papain-like cysteine peptidase superfamily RAM_47245 IPR013589 Bacterial transglutaminase-like, N-terminal RAM_47245 IPR002931 Transglutaminase-like RAM_47255 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_47255 IPR001647 DNA-binding HTH domain, TetR-type RAM_47255 IPR009057 Homeobox-like domain superfamily RAM_47255 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RAM_47260 IPR011650 Peptidase M20, dimerisation domain RAM_47260 IPR002933 Peptidase M20 RAM_47260 IPR036264 Bacterial exopeptidase dimerisation domain RAM_47260 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria RAM_47265 IPR029061 Thiamin diphosphate-binding fold RAM_47265 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha RAM_47265 IPR001017 Dehydrogenase, E1 component RAM_47270 IPR033248 Transketolase, C-terminal domain RAM_47270 IPR029061 Thiamin diphosphate-binding fold RAM_47270 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RAM_47270 IPR005475 Transketolase-like, pyrimidine-binding domain RAM_47275 IPR004167 Peripheral subunit-binding domain RAM_47275 IPR036625 E3-binding domain superfamily RAM_47275 IPR011053 Single hybrid motif RAM_47275 IPR000089 Biotin/lipoyl attachment RAM_47275 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RAM_47275 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RAM_47285 IPR036640 ABC transporter type 1, transmembrane domain superfamily RAM_47285 IPR039421 Type I protein exporter RAM_47285 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_47285 IPR017871 ABC transporter, conserved site RAM_47285 IPR003439 ABC transporter-like RAM_47285 IPR003593 AAA+ ATPase domain RAM_47285 IPR011527 ABC transporter type 1, transmembrane domain RAM_47305 IPR007313 FxsA cytoplasmic membrane protein RAM_47345 IPR001647 DNA-binding HTH domain, TetR-type RAM_47345 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_47345 IPR019915 Transcription regulator, pyrimidine utilisation, RutR RAM_47345 IPR013573 Transcription regulator YcdC, C-terminal RAM_47345 IPR009057 Homeobox-like domain superfamily RAM_47350 IPR029069 HotDog domain superfamily RAM_47350 IPR002539 MaoC-like dehydratase domain RAM_47350 IPR003965 Fatty acid synthase RAM_47355 IPR036291 NAD(P)-binding domain superfamily RAM_47355 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_47355 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_47355 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_47360 IPR020613 Thiolase, conserved site RAM_47360 IPR020616 Thiolase, N-terminal RAM_47360 IPR012806 Acetyl-CoA C-acyltransferase FadI RAM_47360 IPR016039 Thiolase-like RAM_47360 IPR002155 Thiolase RAM_47360 IPR020610 Thiolase, active site RAM_47360 IPR020617 Thiolase, C-terminal RAM_47405 IPR038377 Sodium/glucose symporter superfamily RAM_47405 IPR001734 Sodium/solute symporter RAM_47415 IPR000073 Alpha/beta hydrolase fold-1 RAM_47415 IPR029058 Alpha/Beta hydrolase fold RAM_47440 IPR003593 AAA+ ATPase domain RAM_47440 IPR003439 ABC transporter-like RAM_47440 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_47450 IPR024014 FMNH(2)-dependent dimethylsulfone monooxygenase SfnG RAM_47450 IPR011251 Luciferase-like domain RAM_47450 IPR036661 Luciferase-like domain superfamily RAM_47455 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal RAM_47455 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising RAM_47455 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal RAM_47455 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal RAM_47455 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain RAM_47455 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site RAM_47470 IPR009012 GrpE nucleotide exchange factor, head RAM_47470 IPR000740 GrpE nucleotide exchange factor RAM_47470 IPR013805 GrpE nucleotide exchange factor, coiled-coil RAM_47480 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_47480 IPR022812 Dynamin superfamily RAM_47485 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_47485 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_47490 IPR016032 Signal transduction response regulator, C-terminal effector RAM_47490 IPR000792 Transcription regulator LuxR, C-terminal RAM_47490 IPR001789 Signal transduction response regulator, receiver domain RAM_47490 IPR011006 CheY-like superfamily RAM_47495 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_47495 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_47495 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RAM_47495 IPR036291 NAD(P)-binding domain superfamily RAM_47505 IPR017871 ABC transporter, conserved site RAM_47505 IPR003439 ABC transporter-like RAM_47505 IPR003593 AAA+ ATPase domain RAM_47505 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_47515 IPR003439 ABC transporter-like RAM_47515 IPR017871 ABC transporter, conserved site RAM_47515 IPR003593 AAA+ ATPase domain RAM_47515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_47530 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_47530 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type RAM_47540 IPR015854 ABC transporter, lipoprotein release, LolD RAM_47540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_47540 IPR003593 AAA+ ATPase domain RAM_47540 IPR003439 ABC transporter-like RAM_47540 IPR017871 ABC transporter, conserved site RAM_47545 IPR003594 Histidine kinase/HSP90-like ATPase RAM_47545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RAM_47545 IPR016381 Signal transduction histidine kinase, DegS RAM_47545 IPR008595 Sensor DegS RAM_47545 IPR005467 Histidine kinase domain RAM_47545 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RAM_47550 IPR000792 Transcription regulator LuxR, C-terminal RAM_47550 IPR001789 Signal transduction response regulator, receiver domain RAM_47550 IPR016032 Signal transduction response regulator, C-terminal effector RAM_47550 IPR011006 CheY-like superfamily RAM_47565 IPR032466 Metal-dependent hydrolase RAM_47565 IPR011059 Metal-dependent hydrolase, composite domain superfamily RAM_47565 IPR023512 Deaminase MtaD/DadD RAM_47565 IPR006680 Amidohydrolase-related RAM_47570 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_47570 IPR036291 NAD(P)-binding domain superfamily RAM_47570 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_47575 IPR019948 Gram-positive LPXTG cell wall anchor RAM_47575 IPR013783 Immunoglobulin-like fold RAM_47575 IPR019931 LPXTG cell wall anchor domain RAM_47575 IPR033764 SD-repeat containing protein, B domain RAM_47575 IPR041171 SDR-like Ig domain RAM_47575 IPR005877 YSIRK Gram-positive signal peptide RAM_47575 IPR011252 Fibrogen-binding domain 1 RAM_47575 IPR008966 Adhesion domain superfamily RAM_47585 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RAM_47585 IPR036259 MFS transporter superfamily RAM_47585 IPR020846 Major facilitator superfamily domain RAM_47585 IPR011701 Major facilitator superfamily RAM_47590 IPR036390 Winged helix DNA-binding domain superfamily RAM_47590 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_47590 IPR000835 MarR-type HTH domain RAM_47595 IPR041492 Haloacid dehalogenase-like hydrolase RAM_47595 IPR023214 HAD superfamily RAM_47595 IPR036412 HAD-like superfamily RAM_47595 IPR006439 HAD hydrolase, subfamily IA RAM_47595 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RAM_47605 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_47605 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_47605 IPR014284 RNA polymerase sigma-70 like domain RAM_47605 IPR014325 RNA polymerase sigma-E factor, actinobacteria RAM_47605 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_47605 IPR007627 RNA polymerase sigma-70 region 2 RAM_47605 IPR013325 RNA polymerase sigma factor, region 2 RAM_47605 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site RAM_47610 IPR017815 Myo-inositol 1-phosphate synthase, actinobacteria RAM_47610 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like RAM_47610 IPR036291 NAD(P)-binding domain superfamily RAM_47610 IPR002587 Myo-inositol-1-phosphate synthase RAM_47615 IPR036390 Winged helix DNA-binding domain superfamily RAM_47615 IPR011991 ArsR-like helix-turn-helix domain RAM_47615 IPR005149 Transcription regulator PadR, N-terminal RAM_47615 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_47620 IPR035169 Protein of unknown function DUF5318 RAM_47625 IPR001460 Penicillin-binding protein, transpeptidase RAM_47625 IPR036950 Penicillin binding protein transglycosylase domain RAM_47625 IPR023346 Lysozyme-like domain superfamily RAM_47625 IPR001264 Glycosyl transferase, family 51 RAM_47625 IPR012338 Beta-lactamase/transpeptidase-like RAM_47630 IPR036950 Penicillin binding protein transglycosylase domain RAM_47630 IPR012338 Beta-lactamase/transpeptidase-like RAM_47630 IPR001460 Penicillin-binding protein, transpeptidase RAM_47630 IPR023346 Lysozyme-like domain superfamily RAM_47630 IPR001264 Glycosyl transferase, family 51 RAM_47635 IPR036291 NAD(P)-binding domain superfamily RAM_47635 IPR004104 Oxidoreductase, C-terminal RAM_47635 IPR000683 Oxidoreductase, N-terminal RAM_47640 IPR036390 Winged helix DNA-binding domain superfamily RAM_47640 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_47640 IPR022687 DTXR-type HTH domain RAM_47640 IPR000600 ROK family RAM_47650 IPR018246 AP endonuclease 2, zinc binding site RAM_47650 IPR013022 Xylose isomerase-like, TIM barrel domain RAM_47650 IPR036237 Xylose isomerase-like superfamily RAM_47650 IPR001719 AP endonuclease 2 RAM_47670 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RAM_47670 IPR035980 Ribosomal protein S6 superfamily RAM_47670 IPR020814 Ribosomal protein S6, plastid/chloroplast RAM_47670 IPR000529 Ribosomal protein S6 RAM_47675 IPR011344 Single-stranded DNA-binding protein RAM_47675 IPR000424 Primosome PriB/single-strand DNA-binding RAM_47675 IPR012340 Nucleic acid-binding, OB-fold RAM_47680 IPR036870 Ribosomal protein S18 superfamily RAM_47680 IPR001648 Ribosomal protein S18 RAM_47680 IPR018275 Ribosomal protein S18, conserved site RAM_47685 IPR036935 Ribosomal protein L9, N-terminal domain superfamily RAM_47685 IPR000244 Ribosomal protein L9 RAM_47685 IPR020069 Ribosomal protein L9, C-terminal RAM_47685 IPR020594 Ribosomal protein L9, bacteria/chloroplast RAM_47685 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RAM_47685 IPR036791 Ribosomal protein L9, C-terminal domain superfamily RAM_47685 IPR020070 Ribosomal protein L9, N-terminal RAM_47710 IPR006141 Intein N-terminal splicing region RAM_47710 IPR003587 Hint domain N-terminal RAM_47710 IPR004042 Intein DOD homing endonuclease RAM_47710 IPR006142 Intein RAM_47710 IPR027434 Homing endonuclease RAM_47710 IPR030934 Intein C-terminal splicing region RAM_47710 IPR036844 Hint domain superfamily RAM_47710 IPR004042 Intein DOD homing endonuclease RAM_47710 IPR003587 Hint domain N-terminal RAM_47710 IPR007692 DNA helicase, DnaB type RAM_47710 IPR027434 Homing endonuclease RAM_47710 IPR006142 Intein RAM_47710 IPR003593 AAA+ ATPase domain RAM_47710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_47710 IPR004860 Homing endonuclease, LAGLIDADG RAM_47710 IPR036844 Hint domain superfamily RAM_47710 IPR006141 Intein N-terminal splicing region RAM_47710 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily RAM_47710 IPR007692 DNA helicase, DnaB type RAM_47710 IPR007694 DNA helicase, DnaB-like, C-terminal RAM_47710 IPR007693 DNA helicase, DnaB-like, N-terminal RAM_47710 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RAM_47710 IPR003586 Hint domain C-terminal RAM_47710 IPR003593 AAA+ ATPase domain RAM_47710 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_47710 IPR004860 Homing endonuclease, LAGLIDADG RAM_47710 IPR007693 DNA helicase, DnaB-like, N-terminal RAM_47710 IPR030934 Intein C-terminal splicing region RAM_47710 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily RAM_47710 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RAM_47710 IPR003586 Hint domain C-terminal RAM_47710 IPR007694 DNA helicase, DnaB-like, C-terminal RAM_47725 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B RAM_47725 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type RAM_47740 IPR002549 Transmembrane protein TqsA-like RAM_47750 IPR011006 CheY-like superfamily RAM_47750 IPR001789 Signal transduction response regulator, receiver domain RAM_47750 IPR000792 Transcription regulator LuxR, C-terminal RAM_47750 IPR016032 Signal transduction response regulator, C-terminal effector RAM_47765 IPR036259 MFS transporter superfamily RAM_47765 IPR011701 Major facilitator superfamily RAM_47765 IPR020846 Major facilitator superfamily domain RAM_47770 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RAM_47770 IPR040442 Pyruvate kinase-like domain superfamily RAM_47770 IPR018274 PEP-utilising enzyme, active site RAM_47770 IPR000121 PEP-utilising enzyme, C-terminal RAM_47770 IPR006318 Phosphotransferase system, enzyme I-like RAM_47770 IPR024692 Phosphotransferase system, enzyme I RAM_47770 IPR036637 Phosphohistidine domain superfamily RAM_47770 IPR008279 PEP-utilising enzyme, mobile domain RAM_47770 IPR023151 PEP-utilising enzyme, conserved site RAM_47770 IPR036618 PtsI, HPr-binding domain superfamily RAM_47770 IPR008731 Phosphotransferase system, enzyme I N-terminal RAM_47780 IPR029056 Ribokinase-like RAM_47780 IPR011877 Ribokinase RAM_47780 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RAM_47780 IPR002139 Ribokinase/fructokinase RAM_47780 IPR011611 Carbohydrate kinase PfkB RAM_47830 IPR009057 Homeobox-like domain superfamily RAM_47830 IPR001647 DNA-binding HTH domain, TetR-type RAM_47830 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) RAM_47830 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily RAM_47835 IPR036291 NAD(P)-binding domain superfamily RAM_47835 IPR002347 Short-chain dehydrogenase/reductase SDR RAM_47835 IPR020904 Short-chain dehydrogenase/reductase, conserved site RAM_47840 IPR002302 Leucine-tRNA ligase RAM_47840 IPR025709 Leucyl-tRNA synthetase, editing domain RAM_47840 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RAM_47840 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RAM_47840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RAM_47840 IPR015413 Methionyl/Leucyl tRNA synthetase RAM_47840 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RAM_47855 IPR003774 Protein of unknown function UPF0301 RAM_47860 IPR011701 Major facilitator superfamily RAM_47860 IPR036259 MFS transporter superfamily RAM_47895 IPR005502 ADP-ribosylation/Crystallin J1 RAM_47895 IPR013479 ADP-ribosyl-dinitrogen reductase hydrolase RAM_47895 IPR036705 ADP-ribosylation/Crystallin J1 superfamily RAM_47920 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RAM_47920 IPR023068 CCA-adding enzyme, firmicutes RAM_47920 IPR002646 Poly A polymerase, head domain RAM_47920 IPR032810 CCA-adding enzyme, C-terminal RAM_47925 IPR015797 NUDIX hydrolase-like domain superfamily RAM_47925 IPR020084 NUDIX hydrolase, conserved site RAM_47925 IPR000086 NUDIX hydrolase domain RAM_47925 IPR020476 NUDIX hydrolase RAM_47940 IPR004268 Peptidoglycan biosynthesis protein MurJ RAM_47940 IPR011009 Protein kinase-like domain superfamily RAM_47950 IPR013324 RNA polymerase sigma factor, region 3/4-like RAM_47950 IPR036388 Winged helix-like DNA-binding domain superfamily RAM_47950 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 RAM_47950 IPR007627 RNA polymerase sigma-70 region 2 RAM_47950 IPR014284 RNA polymerase sigma-70 like domain RAM_47950 IPR039425 RNA polymerase sigma-70 like RAM_47950 IPR013325 RNA polymerase sigma factor, region 2 RAM_47960 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_47960 IPR005982 Thioredoxin reductase RAM_47960 IPR023753 FAD/NAD(P)-binding domain RAM_47960 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RAM_47965 IPR013766 Thioredoxin domain RAM_47965 IPR017937 Thioredoxin, conserved site RAM_47965 IPR036249 Thioredoxin-like superfamily RAM_47965 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RAM_47965 IPR005982 Thioredoxin reductase RAM_47965 IPR005746 Thioredoxin RAM_47965 IPR036188 FAD/NAD(P)-binding domain superfamily RAM_47965 IPR023753 FAD/NAD(P)-binding domain RAM_47970 IPR036366 PGBD superfamily RAM_47970 IPR036365 PGBD-like superfamily RAM_47970 IPR002477 Peptidoglycan binding-like RAM_47970 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain RAM_47980 IPR015424 Pyridoxal phosphate-dependent transferase RAM_47980 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RAM_47980 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RAM_47980 IPR004839 Aminotransferase, class I/classII RAM_47985 IPR013815 ATP-grasp fold, subdomain 1 RAM_47985 IPR011761 ATP-grasp fold RAM_47985 IPR016185 Pre-ATP-grasp domain superfamily RAM_47985 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RAM_47985 IPR005905 D-alanine--D-alanine ligase RAM_47985 IPR011095 D-alanine--D-alanine ligase, C-terminal RAM_47985 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RAM_47990 IPR036086 ParB/Sulfiredoxin superfamily RAM_47990 IPR003115 ParB/Sulfiredoxin RAM_47990 IPR041468 ParB/Spo0J, HTH domain RAM_47990 IPR004437 ParB/RepB/Spo0J partition protein RAM_47995 IPR025669 AAA domain RAM_47995 IPR027417 P-loop containing nucleoside triphosphate hydrolase RAM_48000 IPR003682 rRNA small subunit methyltransferase G RAM_48000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RAM_48015 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RAM_48015 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 RAM_48020 IPR002696 Putative membrane protein insertion efficiency factor RAM_48025 IPR000271 Ribosomal protein L34 RAM_48025 IPR020939 Ribosomal protein L34, conserved site