AMES_0001 SM00382 ATPases associated with a variety of cellular activities AMES_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain AMES_0002 SM00480 DNA polymerase III beta subunit AMES_0003 SM01350 AMES_0003 AMES_0004 SM00382 ATPases associated with a variety of cellular activities AMES_0006 SM00387 Histidine kinase-like ATPases AMES_0006 SM00433 TopoisomeraseII AMES_0007 SM00434 DNA Topoisomerase IV AMES_0018 SM00530 Helix-turn-helix XRE-family like proteins AMES_0022 SM00382 ATPases associated with a variety of cellular activities AMES_0023 SM00862 Transcriptional regulatory protein, C terminal AMES_0023 SM01043 Bacterial transcriptional activator domain AMES_0040 SM00382 ATPases associated with a variety of cellular activities AMES_0043 SM00421 helix_turn_helix, Lux Regulon AMES_0043 SM00448 cheY-homologous receiver domain AMES_0045 SM00382 ATPases associated with a variety of cellular activities AMES_0048 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_0048 SM00740 AMES_0048 AMES_0049 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_0052 SM00331 Sigma factor PP2C-like phosphatases AMES_0052 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMES_0053 SM00240 Forkhead associated domain AMES_0054 SM00240 Forkhead associated domain AMES_0055 SM00020 Trypsin-like serine protease AMES_0056 SM00020 Trypsin-like serine protease AMES_0063 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_0063 SM00895 AMES_0063 AMES_0067 SM00382 ATPases associated with a variety of cellular activities AMES_0068 SM00382 ATPases associated with a variety of cellular activities AMES_0073 SM00421 helix_turn_helix, Lux Regulon AMES_0080 SM01400 AMES_0080 AMES_0087 SM00530 Helix-turn-helix XRE-family like proteins AMES_0094 SM00382 ATPases associated with a variety of cellular activities AMES_0101 SM00822 AMES_0101 AMES_0102 SM00984 UDP binding domain AMES_0109 SM00530 Helix-turn-helix XRE-family like proteins AMES_0111 SM00421 helix_turn_helix, Lux Regulon AMES_0111 SM00448 cheY-homologous receiver domain AMES_0127 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMES_0127 SM01232 AMES_0127 AMES_0128 SM00387 Histidine kinase-like ATPases AMES_0130 SM00606 Cellulose Binding Domain Type IV AMES_0131 SM00448 cheY-homologous receiver domain AMES_0131 SM00850 LytTr DNA-binding domain AMES_0134 SM00450 Rhodanese Homology Domain AMES_0153 SM00327 von Willebrand factor (vWF) type A domain AMES_0157 SM00346 helix_turn_helix isocitrate lyase regulation AMES_0159 SM00245 tail specific protease AMES_0162 SM00382 ATPases associated with a variety of cellular activities AMES_0164 SM00421 helix_turn_helix, Lux Regulon AMES_0164 SM00448 cheY-homologous receiver domain AMES_0168 SM00894 Excalibur calcium-binding domain AMES_0169 SM00479 AMES_0169 AMES_0176 SM00506 Appr-1"-p processing enzyme AMES_0178 SM00855 Phosphoglycerate mutase family AMES_0194 SM00530 Helix-turn-helix XRE-family like proteins AMES_0195 SM00028 Tetratricopeptide repeats AMES_0195 SM00862 Transcriptional regulatory protein, C terminal AMES_0195 SM01043 Bacterial transcriptional activator domain AMES_0207 SM00822 AMES_0207 AMES_0215 SM00563 Phosphate acyltransferases AMES_0220 SM00014 Acid phosphatase homologues AMES_0234 SM00382 ATPases associated with a variety of cellular activities AMES_0237 SM00829 Enoylreductase AMES_0241 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_0248 SM00822 AMES_0248 AMES_0250 SM00448 cheY-homologous receiver domain AMES_0251 SM00387 Histidine kinase-like ATPases AMES_0252 SM00382 ATPases associated with a variety of cellular activities AMES_0257 SM00421 helix_turn_helix, Lux Regulon AMES_0260 SM00344 helix_turn_helix ASNC type AMES_0261 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMES_0261 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_0264 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_0264 SM00895 AMES_0264 AMES_0272 SM00636 AMES_0272 AMES_0272 SM00637 AMES_0272 AMES_0273 SM00637 AMES_0273 AMES_0276 SM00671 Sel1-like repeats. AMES_0294 SM00382 ATPases associated with a variety of cellular activities AMES_0310 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_0316 SM00998 Adenylosuccinate lyase C-terminus AMES_0328 SM00020 Trypsin-like serine protease AMES_0331 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_0331 SM01260 AMES_0331 AMES_0335 SM00357 Cold shock protein domain AMES_0341 SM00062 Bacterial periplasmic substrate-binding proteins AMES_0342 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_0348 SM00357 Cold shock protein domain AMES_0359 SM00943 Bifunctional DNA primase/polymerase, N-terminal AMES_0381 SM00052 Putative diguanylate phosphodiesterase AMES_0381 SM00091 PAS domain AMES_0381 SM00267 diguanylate cyclase AMES_0390 SM00346 helix_turn_helix isocitrate lyase regulation AMES_0394 SM01350 AMES_0394 AMES_0395 SM00849 Metallo-beta-lactamase superfamily AMES_0396 SM00530 Helix-turn-helix XRE-family like proteins AMES_0417 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_0426 SM00530 Helix-turn-helix XRE-family like proteins AMES_0439 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_0442 SM00829 Enoylreductase AMES_0444 SM00829 Enoylreductase AMES_0456 SM00855 Phosphoglycerate mutase family AMES_0457 SM00421 helix_turn_helix, Lux Regulon AMES_0459 SM00387 Histidine kinase-like ATPases AMES_0459 SM00388 His Kinase A (phosphoacceptor) domain AMES_0460 SM00448 cheY-homologous receiver domain AMES_0460 SM00862 Transcriptional regulatory protein, C terminal AMES_0468 SM00563 Phosphate acyltransferases AMES_0469 SM00387 Histidine kinase-like ATPases AMES_0471 SM00421 helix_turn_helix, Lux Regulon AMES_0471 SM00448 cheY-homologous receiver domain AMES_0478 SM00881 CoA binding domain AMES_0483 SM00342 helix_turn_helix, arabinose operon control protein AMES_0484 SM01004 Delta-aminolevulinic acid dehydratase AMES_0489 SM00382 ATPases associated with a variety of cellular activities AMES_0494 SM00855 Phosphoglycerate mutase family AMES_0502 SM00344 helix_turn_helix ASNC type AMES_0515 SM00862 Transcriptional regulatory protein, C terminal AMES_0515 SM01043 Bacterial transcriptional activator domain AMES_0523 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMES_0524 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMES_0524 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMES_0541 SM00344 helix_turn_helix ASNC type AMES_0545 SM00984 UDP binding domain AMES_0552 SM00710 Parallel beta-helix repeats AMES_0555 SM00014 Acid phosphatase homologues AMES_0557 SM00710 Parallel beta-helix repeats AMES_0580 SM00382 ATPases associated with a variety of cellular activities AMES_0580 SM00464 Found in ATP-dependent protease La (LON) AMES_0583 SM00052 Putative diguanylate phosphodiesterase AMES_0583 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_0583 SM00267 diguanylate cyclase AMES_0589 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_0592 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMES_0593 SM00649 Ribosomal protein L11/L12 AMES_0599 SM00382 ATPases associated with a variety of cellular activities AMES_0615 SM00822 AMES_0615 AMES_0615 SM00823 Phosphopantetheine attachment site AMES_0615 SM00825 Beta-ketoacyl synthase AMES_0615 SM00826 AMES_0615 AMES_0615 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_0615 SM01294 AMES_0615 AMES_0616 SM00822 AMES_0616 AMES_0616 SM00823 Phosphopantetheine attachment site AMES_0616 SM00825 Beta-ketoacyl synthase AMES_0616 SM00826 AMES_0616 AMES_0616 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_0616 SM01294 AMES_0616 AMES_0617 SM00822 AMES_0617 AMES_0617 SM00823 Phosphopantetheine attachment site AMES_0617 SM00825 Beta-ketoacyl synthase AMES_0617 SM00826 AMES_0617 AMES_0617 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_0617 SM01294 AMES_0617 AMES_0618 SM00822 AMES_0618 AMES_0618 SM00823 Phosphopantetheine attachment site AMES_0618 SM00825 Beta-ketoacyl synthase AMES_0618 SM00826 AMES_0618 AMES_0618 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_0618 SM01294 AMES_0618 AMES_0619 SM00822 AMES_0619 AMES_0619 SM00823 Phosphopantetheine attachment site AMES_0619 SM00825 Beta-ketoacyl synthase AMES_0619 SM00826 AMES_0619 AMES_0619 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_0619 SM01294 AMES_0619 AMES_0646 SM00824 Thioesterase AMES_0648 SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. AMES_0650 SM00861 Transketolase, pyrimidine binding domain AMES_0653 SM00421 helix_turn_helix, Lux Regulon AMES_0655 SM00663 RNA polymerase I subunit A N-terminus AMES_0658 SM00344 helix_turn_helix ASNC type AMES_0661 SM00100 Cyclic nucleotide-monophosphate binding domain AMES_0672 SM00838 Elongation factor G C-terminus AMES_0672 SM00889 Elongation factor G, domain IV AMES_0674 SM01403 AMES_0674 AMES_0678 SM01382 AMES_0678 AMES_0678 SM01383 AMES_0678 AMES_0681 SM00322 K homology RNA-binding domain AMES_0685 SM01374 AMES_0685 AMES_0686 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMES_0705 SM00363 S4 RNA-binding domain AMES_0705 SM01390 AMES_0705 AMES_0706 SM00662 RNA polymerases D AMES_0736 SM00420 helix_turn_helix, Deoxyribose operon repressor AMES_0736 SM01134 AMES_0736 AMES_0738 SM00382 ATPases associated with a variety of cellular activities AMES_0739 SM01005 Alanine racemase, C-terminal domain AMES_0753 SM00644 AMES_0753 AMES_0755 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_0756 SM00226 Low molecular weight phosphatase family AMES_0758 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_0760 SM00883 Chaperonin 10 Kd subunit AMES_0763 SM00422 helix_turn_helix, mercury resistance AMES_0765 SM00421 helix_turn_helix, Lux Regulon AMES_0765 SM00448 cheY-homologous receiver domain AMES_0769 SM00116 Domain in cystathionine beta-synthase and other proteins. AMES_0769 SM01240 AMES_0769 AMES_0772 SM01240 AMES_0772 AMES_0785 SM00387 Histidine kinase-like ATPases AMES_0787 SM00421 helix_turn_helix, Lux Regulon AMES_0787 SM00448 cheY-homologous receiver domain AMES_0790 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_0794 SM00830 Chorismate mutase type II AMES_0801 SM00881 CoA binding domain AMES_0805 SM00798 AICARFT/IMPCHase bienzyme AMES_0805 SM00851 MGS-like domain AMES_0814 SM00481 DNA polymerase alpha chain like domain AMES_0820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_0825 SM00342 helix_turn_helix, arabinose operon control protein AMES_0831 SM01329 AMES_0831 AMES_0835 SM00849 Metallo-beta-lactamase superfamily AMES_0851 SM00776 AMES_0851 AMES_0854 SM00382 ATPases associated with a variety of cellular activities AMES_0858 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AMES_0863 SM00487 DEAD-like helicases superfamily AMES_0863 SM00490 helicase superfamily c-terminal domain AMES_0867 SM00829 Enoylreductase AMES_0879 SM01133 AMES_0879 AMES_0887 SM00422 helix_turn_helix, mercury resistance AMES_0893 SM00448 cheY-homologous receiver domain AMES_0893 SM00862 Transcriptional regulatory protein, C terminal AMES_0894 SM00387 Histidine kinase-like ATPases AMES_0894 SM00388 His Kinase A (phosphoacceptor) domain AMES_0908 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_0909 SM00422 helix_turn_helix, mercury resistance AMES_0931 SM00878 Biotin carboxylase C-terminal domain AMES_0942 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_0944 SM00421 helix_turn_helix, Lux Regulon AMES_0944 SM00448 cheY-homologous receiver domain AMES_0948 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_0954 SM00822 AMES_0954 AMES_0955 SM00342 helix_turn_helix, arabinose operon control protein AMES_0957 SM00460 Transglutaminase/protease-like homologues AMES_0967 SM00421 helix_turn_helix, Lux Regulon AMES_0967 SM00448 cheY-homologous receiver domain AMES_0976 SM00448 cheY-homologous receiver domain AMES_0976 SM00862 Transcriptional regulatory protein, C terminal AMES_0977 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_0977 SM00387 Histidine kinase-like ATPases AMES_0978 SM00421 helix_turn_helix, Lux Regulon AMES_0979 SM00421 helix_turn_helix, Lux Regulon AMES_0979 SM00448 cheY-homologous receiver domain AMES_0989 SM01001 AIR carboxylase AMES_1015 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1026 SM00880 AMES_1026 AMES_1030 SM00636 AMES_1030 AMES_1034 SM00530 Helix-turn-helix XRE-family like proteins AMES_1035 SM00495 Chitin-binding domain type 3 AMES_1036 SM00530 Helix-turn-helix XRE-family like proteins AMES_1044 SM00563 Phosphate acyltransferases AMES_1045 SM00382 ATPases associated with a variety of cellular activities AMES_1047 SM00382 ATPases associated with a variety of cellular activities AMES_1064 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMES_1068 SM00924 MgtE intracellular N domain AMES_1071 SM00244 prohibitin homologues AMES_1078 SM00382 ATPases associated with a variety of cellular activities AMES_1083 SM00421 helix_turn_helix, Lux Regulon AMES_1083 SM00448 cheY-homologous receiver domain AMES_1096 SM00481 DNA polymerase alpha chain like domain AMES_1102 SM00487 DEAD-like helicases superfamily AMES_1102 SM00490 helicase superfamily c-terminal domain AMES_1112 SM00450 Rhodanese Homology Domain AMES_1114 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMES_1119 SM00862 Transcriptional regulatory protein, C terminal AMES_1153 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_1157 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1157 SM00895 AMES_1157 AMES_1162 SM00226 Low molecular weight phosphatase family AMES_1164 SM00830 Chorismate mutase type II AMES_1167 SM00855 Phosphoglycerate mutase family AMES_1170 SM00421 helix_turn_helix, Lux Regulon AMES_1186 SM00955 AMES_1186 AMES_1193 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1193 SM00895 AMES_1193 AMES_1195 SM00382 ATPases associated with a variety of cellular activities AMES_1209 SM00957 SecA DEAD-like domain AMES_1209 SM00958 SecA preprotein cross-linking domain AMES_1213 SM01230 AMES_1213 AMES_1215 SM00344 helix_turn_helix ASNC type AMES_1216 SM00450 Rhodanese Homology Domain AMES_1222 SM01230 AMES_1222 AMES_1226 SM00341 Helicase and RNase D C-terminal AMES_1238 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMES_1243 SM00937 AMES_1243 AMES_1244 SM00382 ATPases associated with a variety of cellular activities AMES_1250 SM00421 helix_turn_helix, Lux Regulon AMES_1250 SM00448 cheY-homologous receiver domain AMES_1254 SM00267 diguanylate cyclase AMES_1256 SM00346 helix_turn_helix isocitrate lyase regulation AMES_1271 SM00421 helix_turn_helix, Lux Regulon AMES_1271 SM00448 cheY-homologous receiver domain AMES_1273 SM00028 Tetratricopeptide repeats AMES_1275 SM00382 ATPases associated with a variety of cellular activities AMES_1276 SM00487 DEAD-like helicases superfamily AMES_1276 SM00490 helicase superfamily c-terminal domain AMES_1276 SM00847 Helicase associated domain (HA2) Add an annotation AMES_1277 SM00062 Bacterial periplasmic substrate-binding proteins AMES_1285 SM00342 helix_turn_helix, arabinose operon control protein AMES_1288 SM00458 Ricin-type beta-trefoil AMES_1289 SM00434 DNA Topoisomerase IV AMES_1290 SM00387 Histidine kinase-like ATPases AMES_1290 SM00433 TopoisomeraseII AMES_1298 SM00560 LamG-like jellyroll fold domain AMES_1301 SM00382 ATPases associated with a variety of cellular activities AMES_1303 SM00354 helix_turn _helix lactose operon repressor AMES_1310 SM00382 ATPases associated with a variety of cellular activities AMES_1321 SM00458 Ricin-type beta-trefoil AMES_1329 SM00060 Fibronectin type 3 domain AMES_1338 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMES_1348 SM00382 ATPases associated with a variety of cellular activities AMES_1358 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_1359 SM00849 Metallo-beta-lactamase superfamily AMES_1364 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1364 SM00866 AMES_1364 AMES_1365 SM00028 Tetratricopeptide repeats AMES_1365 SM00862 Transcriptional regulatory protein, C terminal AMES_1365 SM01043 Bacterial transcriptional activator domain AMES_1369 SM00382 ATPases associated with a variety of cellular activities AMES_1370 SM00382 ATPases associated with a variety of cellular activities AMES_1378 SM00421 helix_turn_helix, Lux Regulon AMES_1378 SM00448 cheY-homologous receiver domain AMES_1379 SM00387 Histidine kinase-like ATPases AMES_1380 SM00382 ATPases associated with a variety of cellular activities AMES_1384 SM00382 ATPases associated with a variety of cellular activities AMES_1396 SM00458 Ricin-type beta-trefoil AMES_1407 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_1416 SM00829 Enoylreductase AMES_1418 SM00829 Enoylreductase AMES_1419 SM00530 Helix-turn-helix XRE-family like proteins AMES_1421 SM00387 Histidine kinase-like ATPases AMES_1422 SM00960 Roadblock/LC7 domain AMES_1429 SM00822 AMES_1429 AMES_1444 SM00028 Tetratricopeptide repeats AMES_1445 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_1447 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_1449 SM00829 Enoylreductase AMES_1454 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_1455 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_1456 SM00421 helix_turn_helix, Lux Regulon AMES_1456 SM00448 cheY-homologous receiver domain AMES_1459 SM00458 Ricin-type beta-trefoil AMES_1462 SM00448 cheY-homologous receiver domain AMES_1463 SM00100 Cyclic nucleotide-monophosphate binding domain AMES_1463 SM00387 Histidine kinase-like ATPases AMES_1467 SM00327 von Willebrand factor (vWF) type A domain AMES_1476 SM00060 Fibronectin type 3 domain AMES_1477 SM00421 helix_turn_helix, Lux Regulon AMES_1490 SM00062 Bacterial periplasmic substrate-binding proteins AMES_1492 SM00382 ATPases associated with a variety of cellular activities AMES_1497 SM00382 ATPases associated with a variety of cellular activities AMES_1503 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1503 SM00895 AMES_1503 AMES_1505 SM00382 ATPases associated with a variety of cellular activities AMES_1507 SM00854 Bacterial capsule synthesis protein PGA_cap AMES_1509 SM00100 Cyclic nucleotide-monophosphate binding domain AMES_1510 SM00100 Cyclic nucleotide-monophosphate binding domain AMES_1517 SM00028 Tetratricopeptide repeats AMES_1517 SM00862 Transcriptional regulatory protein, C terminal AMES_1517 SM01043 Bacterial transcriptional activator domain AMES_1522 SM00812 Alpha-L-fucosidase AMES_1525 SM00944 Pro-kumamolisin, activation domain AMES_1526 SM00387 Histidine kinase-like ATPases AMES_1532 SM00382 ATPases associated with a variety of cellular activities AMES_1536 SM00487 DEAD-like helicases superfamily AMES_1536 SM00490 helicase superfamily c-terminal domain AMES_1541 SM00316 Ribosomal protein S1-like RNA-binding domain AMES_1541 SM00732 Likely ribonuclease with RNase H fold. AMES_1542 SM00636 AMES_1542 AMES_1547 SM00342 helix_turn_helix, arabinose operon control protein AMES_1560 SM00530 Helix-turn-helix XRE-family like proteins AMES_1564 SM00829 Enoylreductase AMES_1569 SM00382 ATPases associated with a variety of cellular activities AMES_1571 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1578 SM00448 cheY-homologous receiver domain AMES_1578 SM00850 LytTr DNA-binding domain AMES_1579 SM00387 Histidine kinase-like ATPases AMES_1583 SM00382 ATPases associated with a variety of cellular activities AMES_1585 SM00354 helix_turn _helix lactose operon repressor AMES_1589 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_1600 SM00450 Rhodanese Homology Domain AMES_1602 SM00382 ATPases associated with a variety of cellular activities AMES_1610 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1614 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_1616 SM00849 Metallo-beta-lactamase superfamily AMES_1626 SM00530 Helix-turn-helix XRE-family like proteins AMES_1641 SM00893 Electron transfer flavoprotein domain AMES_1642 SM00893 Electron transfer flavoprotein domain AMES_1644 SM00563 Phosphate acyltransferases AMES_1645 SM00829 Enoylreductase AMES_1646 SM00421 helix_turn_helix, Lux Regulon AMES_1653 SM00849 Metallo-beta-lactamase superfamily AMES_1657 SM00292 breast cancer carboxy-terminal domain AMES_1657 SM00532 Ligase N family AMES_1662 SM00845 GatB domain AMES_1678 SM00248 ankyrin repeats AMES_1684 SM01329 AMES_1684 AMES_1685 SM00917 LeuA allosteric (dimerisation) domain AMES_1689 SM00411 bacterial (prokaryotic) histone like domain AMES_1690 SM00028 Tetratricopeptide repeats AMES_1700 SM00411 bacterial (prokaryotic) histone like domain AMES_1705 SM01217 AMES_1705 AMES_1708 SM00849 Metallo-beta-lactamase superfamily AMES_1709 SM00346 helix_turn_helix isocitrate lyase regulation AMES_1712 SM00411 bacterial (prokaryotic) histone like domain AMES_1713 SM00028 Tetratricopeptide repeats AMES_1713 SM00862 Transcriptional regulatory protein, C terminal AMES_1713 SM01043 Bacterial transcriptional activator domain AMES_1714 SM00855 Phosphoglycerate mutase family AMES_1717 SM00563 Phosphate acyltransferases AMES_1720 SM00870 AMES_1720 AMES_1723 SM00900 AMES_1723 AMES_1725 SM00448 cheY-homologous receiver domain AMES_1725 SM00862 Transcriptional regulatory protein, C terminal AMES_1727 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_1727 SM00387 Histidine kinase-like ATPases AMES_1727 SM00388 His Kinase A (phosphoacceptor) domain AMES_1728 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1736 SM00986 Uracil DNA glycosylase superfamily AMES_1736 SM00987 UreE urease accessory protein, C-terminal domain AMES_1739 SM01120 AMES_1739 AMES_1739 SM01121 AMES_1739 AMES_1740 SM00487 DEAD-like helicases superfamily AMES_1740 SM00490 helicase superfamily c-terminal domain AMES_1748 SM00878 Biotin carboxylase C-terminal domain AMES_1750 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1773 SM00320 WD40 repeats AMES_1783 SM00358 Double-stranded RNA binding motif AMES_1783 SM00535 Ribonuclease III family AMES_1785 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMES_1785 SM01232 AMES_1785 AMES_1794 SM01230 AMES_1794 AMES_1804 SM00729 Elongator protein 3, MiaB family, Radical SAM AMES_1808 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1808 SM00895 AMES_1808 AMES_1811 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1814 SM00822 AMES_1814 AMES_1816 SM00422 helix_turn_helix, mercury resistance AMES_1821 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_1824 SM00382 ATPases associated with a variety of cellular activities AMES_1826 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_1826 SM00895 AMES_1826 AMES_1843 SM00882 Coenzyme A transferase AMES_1844 SM00882 Coenzyme A transferase AMES_1850 SM00346 helix_turn_helix isocitrate lyase regulation AMES_1852 SM00382 ATPases associated with a variety of cellular activities AMES_1854 SM00327 von Willebrand factor (vWF) type A domain AMES_1857 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMES_1858 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMES_1860 SM00267 diguanylate cyclase AMES_1864 SM00060 Fibronectin type 3 domain AMES_1871 SM00382 ATPases associated with a variety of cellular activities AMES_1875 SM00354 helix_turn _helix lactose operon repressor AMES_1881 SM00387 Histidine kinase-like ATPases AMES_1881 SM00388 His Kinase A (phosphoacceptor) domain AMES_1882 SM00448 cheY-homologous receiver domain AMES_1882 SM00862 Transcriptional regulatory protein, C terminal AMES_1888 SM00968 SMC proteins Flexible Hinge Domain AMES_1893 SM00382 ATPases associated with a variety of cellular activities AMES_1893 SM00962 SRP54-type protein, GTPase domain AMES_1893 SM00963 SRP54-type protein, helical bundle domain AMES_1895 SM00346 helix_turn_helix isocitrate lyase regulation AMES_1901 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_1904 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMES_1907 SM00458 Ricin-type beta-trefoil AMES_1908 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMES_1917 SM00881 CoA binding domain AMES_1926 SM00938 Nitrogen regulatory protein P-II AMES_1927 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMES_1931 SM00267 diguanylate cyclase AMES_1932 SM00822 AMES_1932 AMES_1935 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AMES_1936 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_1937 SM00382 ATPases associated with a variety of cellular activities AMES_1938 SM00382 ATPases associated with a variety of cellular activities AMES_1938 SM00962 SRP54-type protein, GTPase domain AMES_1938 SM00963 SRP54-type protein, helical bundle domain AMES_1952 SM00382 ATPases associated with a variety of cellular activities AMES_1971 SM00861 Transketolase, pyrimidine binding domain AMES_1974 SM00758 AMES_1974 AMES_1981 SM00382 ATPases associated with a variety of cellular activities AMES_1983 SM00530 Helix-turn-helix XRE-family like proteins AMES_1991 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMES_1993 SM00422 helix_turn_helix, mercury resistance AMES_1999 SM00829 Enoylreductase AMES_2001 SM00530 Helix-turn-helix XRE-family like proteins AMES_2010 SM00822 AMES_2010 AMES_2014 SM00028 Tetratricopeptide repeats AMES_2014 SM00530 Helix-turn-helix XRE-family like proteins AMES_2014 SM00862 Transcriptional regulatory protein, C terminal AMES_2014 SM01043 Bacterial transcriptional activator domain AMES_2016 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_2025 SM00342 helix_turn_helix, arabinose operon control protein AMES_2032 SM00382 ATPases associated with a variety of cellular activities AMES_2035 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_2035 SM00895 AMES_2035 AMES_2039 SM00020 Trypsin-like serine protease AMES_2042 SM00487 DEAD-like helicases superfamily AMES_2042 SM00490 helicase superfamily c-terminal domain AMES_2043 SM00090 RIO-like kinase AMES_2047 SM00849 Metallo-beta-lactamase superfamily AMES_2067 SM00421 helix_turn_helix, Lux Regulon AMES_2067 SM00448 cheY-homologous receiver domain AMES_2073 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMES_2073 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMES_2082 SM00825 Beta-ketoacyl synthase AMES_2085 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_2088 SM00382 ATPases associated with a variety of cellular activities AMES_2095 SM00822 AMES_2095 AMES_2099 SM00857 Resolvase, N terminal domain AMES_2111 SM00020 Trypsin-like serine protease AMES_2113 SM00530 Helix-turn-helix XRE-family like proteins AMES_2122 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_2127 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_2127 SM00895 AMES_2127 AMES_2128 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_2133 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_2133 SM00895 AMES_2133 AMES_2134 SM00481 DNA polymerase alpha chain like domain AMES_2140 SM00729 Elongator protein 3, MiaB family, Radical SAM AMES_2146 SM00014 Acid phosphatase homologues AMES_2152 SM00860 SMI1 / KNR4 family AMES_2163 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_2163 SM00866 AMES_2163 AMES_2173 SM00342 helix_turn_helix, arabinose operon control protein AMES_2183 SM00465 GIY-YIG type nucleases (URI domain) AMES_2183 SM00479 AMES_2183 AMES_2192 SM00947 Carbonic anhydrase AMES_2193 SM00947 Carbonic anhydrase AMES_2195 SM00729 Elongator protein 3, MiaB family, Radical SAM AMES_2195 SM00876 Biotin and Thiamin Synthesis associated domain AMES_2198 SM00464 Found in ATP-dependent protease La (LON) AMES_2212 SM00020 Trypsin-like serine protease AMES_2214 SM00382 ATPases associated with a variety of cellular activities AMES_2224 SM00421 helix_turn_helix, Lux Regulon AMES_2224 SM00448 cheY-homologous receiver domain AMES_2225 SM00421 helix_turn_helix, Lux Regulon AMES_2225 SM00448 cheY-homologous receiver domain AMES_2236 SM00422 helix_turn_helix, mercury resistance AMES_2238 SM00861 Transketolase, pyrimidine binding domain AMES_2261 SM00530 Helix-turn-helix XRE-family like proteins AMES_2270 SM00422 helix_turn_helix, mercury resistance AMES_2272 SM00644 AMES_2272 AMES_2272 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. AMES_2274 SM01230 AMES_2274 AMES_2279 SM00822 AMES_2279 AMES_2286 SM00822 AMES_2286 AMES_2287 SM00530 Helix-turn-helix XRE-family like proteins AMES_2290 SM00244 prohibitin homologues AMES_2292 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_2292 SM00740 AMES_2292 AMES_2310 SM00382 ATPases associated with a variety of cellular activities AMES_2310 SM00487 DEAD-like helicases superfamily AMES_2310 SM00490 helicase superfamily c-terminal domain AMES_2311 SM00420 helix_turn_helix, Deoxyribose operon repressor AMES_2311 SM01134 AMES_2311 AMES_2317 SM00382 ATPases associated with a variety of cellular activities AMES_2330 SM00530 Helix-turn-helix XRE-family like proteins AMES_2335 SM00062 Bacterial periplasmic substrate-binding proteins AMES_2336 SM00382 ATPases associated with a variety of cellular activities AMES_2337 SM00448 cheY-homologous receiver domain AMES_2337 SM00862 Transcriptional regulatory protein, C terminal AMES_2339 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_2339 SM00387 Histidine kinase-like ATPases AMES_2339 SM00388 His Kinase A (phosphoacceptor) domain AMES_2343 SM00014 Acid phosphatase homologues AMES_2344 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_2345 SM00915 Jacalin-like lectin domain AMES_2346 SM00458 Ricin-type beta-trefoil AMES_2353 SM00729 Elongator protein 3, MiaB family, Radical SAM AMES_2376 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_2378 SM00116 Domain in cystathionine beta-synthase and other proteins. AMES_2380 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_2383 SM00421 helix_turn_helix, Lux Regulon AMES_2383 SM00448 cheY-homologous receiver domain AMES_2389 SM00529 Helix-turn-helix diphteria tox regulatory element AMES_2390 SM00450 Rhodanese Homology Domain AMES_2392 SM00881 CoA binding domain AMES_2397 SM00822 AMES_2397 AMES_2413 SM00354 helix_turn _helix lactose operon repressor AMES_2430 SM00563 Phosphate acyltransferases AMES_2435 SM00421 helix_turn_helix, Lux Regulon AMES_2439 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_2440 SM00636 AMES_2440 AMES_2444 SM00530 Helix-turn-helix XRE-family like proteins AMES_2447 SM00421 helix_turn_helix, Lux Regulon AMES_2463 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_2463 SM00387 Histidine kinase-like ATPases AMES_2464 SM00960 Roadblock/LC7 domain AMES_2469 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_2475 SM00487 DEAD-like helicases superfamily AMES_2475 SM00490 helicase superfamily c-terminal domain AMES_2487 SM00904 Riboflavin kinase AMES_2497 SM00903 Flavin reductase like domain AMES_2505 SM00342 helix_turn_helix, arabinose operon control protein AMES_2517 SM00344 helix_turn_helix ASNC type AMES_2525 SM00460 Transglutaminase/protease-like homologues AMES_2533 SM00020 Trypsin-like serine protease AMES_2535 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_2535 SM00866 AMES_2535 AMES_2553 SM00487 DEAD-like helicases superfamily AMES_2555 SM00382 ATPases associated with a variety of cellular activities AMES_2560 SM01230 AMES_2560 AMES_2564 SM00642 Alpha-amylase domain AMES_2565 SM00642 Alpha-amylase domain AMES_2566 SM00642 Alpha-amylase domain AMES_2567 SM00642 Alpha-amylase domain AMES_2568 SM00642 Alpha-amylase domain AMES_2569 SM00642 Alpha-amylase domain AMES_2571 SM00642 Alpha-amylase domain AMES_2590 SM00861 Transketolase, pyrimidine binding domain AMES_2597 SM00448 cheY-homologous receiver domain AMES_2597 SM00862 Transcriptional regulatory protein, C terminal AMES_2598 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_2598 SM00387 Histidine kinase-like ATPases AMES_2598 SM00388 His Kinase A (phosphoacceptor) domain AMES_2600 SM00481 DNA polymerase alpha chain like domain AMES_2607 SM00796 Allophanate hydrolase subunit 1 AMES_2607 SM00797 Allophanate hydrolase subunit 2 AMES_2607 SM00878 Biotin carboxylase C-terminal domain AMES_2612 SM00341 Helicase and RNase D C-terminal AMES_2612 SM00474 3'-5' exonuclease AMES_2613 SM00421 helix_turn_helix, Lux Regulon AMES_2613 SM00448 cheY-homologous receiver domain AMES_2625 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_2630 SM00316 Ribosomal protein S1-like RNA-binding domain AMES_2656 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_2667 SM01230 AMES_2667 AMES_2669 SM00862 Transcriptional regulatory protein, C terminal AMES_2669 SM01043 Bacterial transcriptional activator domain AMES_2671 SM00305 Hint (Hedgehog/Intein) domain C-terminal region AMES_2671 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AMES_2680 SM00382 ATPases associated with a variety of cellular activities AMES_2685 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMES_2686 SM00732 Likely ribonuclease with RNase H fold. AMES_2693 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_2698 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_2698 SM00866 AMES_2698 AMES_2713 SM00841 Elongation factor P, C-terminal AMES_2713 SM01185 AMES_2713 AMES_2716 SM00530 Helix-turn-helix XRE-family like proteins AMES_2721 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMES_2724 SM00851 MGS-like domain AMES_2724 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMES_2725 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMES_2727 SM00072 Guanylate kinase homologues. AMES_2728 SM01409 AMES_2728 AMES_2740 SM00098 Alkaline phosphatase homologues AMES_2741 SM00421 helix_turn_helix, Lux Regulon AMES_2741 SM00448 cheY-homologous receiver domain AMES_2749 SM00020 Trypsin-like serine protease AMES_2750 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMES_2750 SM00465 GIY-YIG type nucleases (URI domain) AMES_2759 SM00060 Fibronectin type 3 domain AMES_2759 SM00606 Cellulose Binding Domain Type IV AMES_2768 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_2770 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMES_2781 SM00861 Transketolase, pyrimidine binding domain AMES_2790 SM00829 Enoylreductase AMES_2798 SM00382 ATPases associated with a variety of cellular activities AMES_2803 SM00382 ATPases associated with a variety of cellular activities AMES_2813 SM00421 helix_turn_helix, Lux Regulon AMES_2813 SM00448 cheY-homologous receiver domain AMES_2825 SM00052 Putative diguanylate phosphodiesterase AMES_2825 SM00267 diguanylate cyclase AMES_2826 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_2829 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMES_2832 SM00382 ATPases associated with a variety of cellular activities AMES_2836 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_2837 SM00382 ATPases associated with a variety of cellular activities AMES_2845 SM00052 Putative diguanylate phosphodiesterase AMES_2845 SM00091 PAS domain AMES_2845 SM00267 diguanylate cyclase AMES_2859 SM00878 Biotin carboxylase C-terminal domain AMES_2867 SM00267 diguanylate cyclase AMES_2876 SM00458 Ricin-type beta-trefoil AMES_2881 SM00422 helix_turn_helix, mercury resistance AMES_2884 SM00320 WD40 repeats AMES_2888 SM00344 helix_turn_helix ASNC type AMES_2897 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_2900 SM00421 helix_turn_helix, Lux Regulon AMES_2900 SM00448 cheY-homologous receiver domain AMES_2915 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_2923 SM00864 Tubulin/FtsZ family, GTPase domain AMES_2923 SM00865 Tubulin/FtsZ family, C-terminal domain AMES_2930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_2934 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_2940 SM00363 S4 RNA-binding domain AMES_2948 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_2951 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_2960 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMES_2968 SM00382 ATPases associated with a variety of cellular activities AMES_2972 SM00341 Helicase and RNase D C-terminal AMES_2972 SM00487 DEAD-like helicases superfamily AMES_2972 SM00490 helicase superfamily c-terminal domain AMES_2972 SM00956 AMES_2972 AMES_2974 SM00822 AMES_2974 AMES_2977 SM00422 helix_turn_helix, mercury resistance AMES_2981 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_2981 SM00387 Histidine kinase-like ATPases AMES_2981 SM00388 His Kinase A (phosphoacceptor) domain AMES_2982 SM00448 cheY-homologous receiver domain AMES_2982 SM00862 Transcriptional regulatory protein, C terminal AMES_2983 SM00014 Acid phosphatase homologues AMES_2987 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_2987 SM00895 AMES_2987 AMES_2999 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_3000 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_3001 SM00829 Enoylreductase AMES_3007 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMES_3008 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMES_3014 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_3014 SM00866 AMES_3014 AMES_3017 SM00331 Sigma factor PP2C-like phosphatases AMES_3018 SM00331 Sigma factor PP2C-like phosphatases AMES_3019 SM00387 Histidine kinase-like ATPases AMES_3022 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_3023 SM00331 Sigma factor PP2C-like phosphatases AMES_3026 SM00822 AMES_3026 AMES_3028 SM00642 Alpha-amylase domain AMES_3036 SM00354 helix_turn _helix lactose operon repressor AMES_3045 SM00342 helix_turn_helix, arabinose operon control protein AMES_3049 SM01001 AIR carboxylase AMES_3053 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_3054 SM00822 AMES_3054 AMES_3056 SM00382 ATPases associated with a variety of cellular activities AMES_3059 SM00812 Alpha-L-fucosidase AMES_3060 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_3060 SM00895 AMES_3060 AMES_3063 SM00354 helix_turn _helix lactose operon repressor AMES_3068 SM00823 Phosphopantetheine attachment site AMES_3068 SM01294 AMES_3068 AMES_3069 SM00923 MbtH-like protein AMES_3071 SM00823 Phosphopantetheine attachment site AMES_3071 SM01294 AMES_3071 AMES_3077 SM00829 Enoylreductase AMES_3079 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMES_3085 SM00422 helix_turn_helix, mercury resistance AMES_3091 SM00829 Enoylreductase AMES_3109 SM00822 AMES_3109 AMES_3110 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_3111 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_3111 SM00895 AMES_3111 AMES_3115 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_3116 SM00862 Transcriptional regulatory protein, C terminal AMES_3116 SM01043 Bacterial transcriptional activator domain AMES_3118 SM00387 Histidine kinase-like ATPases AMES_3119 SM00421 helix_turn_helix, Lux Regulon AMES_3119 SM00448 cheY-homologous receiver domain AMES_3124 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_3124 SM00387 Histidine kinase-like ATPases AMES_3124 SM00388 His Kinase A (phosphoacceptor) domain AMES_3125 SM00448 cheY-homologous receiver domain AMES_3125 SM00862 Transcriptional regulatory protein, C terminal AMES_3128 SM00382 ATPases associated with a variety of cellular activities AMES_3134 SM00382 ATPases associated with a variety of cellular activities AMES_3137 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMES_3137 SM00292 breast cancer carboxy-terminal domain AMES_3137 SM00532 Ligase N family AMES_3141 SM00960 Roadblock/LC7 domain AMES_3155 SM00642 Alpha-amylase domain AMES_3162 SM00420 helix_turn_helix, Deoxyribose operon repressor AMES_3164 SM00354 helix_turn _helix lactose operon repressor AMES_3165 SM00637 AMES_3165 AMES_3166 SM00637 AMES_3166 AMES_3176 SM00530 Helix-turn-helix XRE-family like proteins AMES_3187 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_3192 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_3196 SM00530 Helix-turn-helix XRE-family like proteins AMES_3200 SM01130 AMES_3200 AMES_3203 SM00100 Cyclic nucleotide-monophosphate binding domain AMES_3204 SM00100 Cyclic nucleotide-monophosphate binding domain AMES_3235 SM00829 Enoylreductase AMES_3246 SM00014 Acid phosphatase homologues AMES_3248 SM00637 AMES_3248 AMES_3250 SM00606 Cellulose Binding Domain Type IV AMES_3251 SM00633 Glycosyl hydrolase family 10 AMES_3251 SM00637 AMES_3251 AMES_3252 SM00637 AMES_3252 AMES_3254 SM00458 Ricin-type beta-trefoil AMES_3255 SM00812 Alpha-L-fucosidase AMES_3256 SM00458 Ricin-type beta-trefoil AMES_3257 SM00458 Ricin-type beta-trefoil AMES_3257 SM00710 Parallel beta-helix repeats AMES_3258 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_3258 SM00895 AMES_3258 AMES_3259 SM00458 Ricin-type beta-trefoil AMES_3260 SM00354 helix_turn _helix lactose operon repressor AMES_3261 SM00458 Ricin-type beta-trefoil AMES_3262 SM00458 Ricin-type beta-trefoil AMES_3268 SM00822 AMES_3268 AMES_3270 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_3272 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_3272 SM00387 Histidine kinase-like ATPases AMES_3273 SM00960 Roadblock/LC7 domain AMES_3277 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_3277 SM00866 AMES_3277 AMES_3282 SM00495 Chitin-binding domain type 3 AMES_3285 SM00226 Low molecular weight phosphatase family AMES_3285 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_3287 SM00421 helix_turn_helix, Lux Regulon AMES_3290 SM00267 diguanylate cyclase AMES_3291 SM00354 helix_turn _helix lactose operon repressor AMES_3297 SM00020 Trypsin-like serine protease AMES_3301 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_3315 SM00954 Region found in RelA / SpoT proteins AMES_3318 SM00631 AMES_3318 AMES_3320 SM00271 DnaJ molecular chaperone homology domain AMES_3323 SM00062 Bacterial periplasmic substrate-binding proteins AMES_3329 SM00822 AMES_3329 AMES_3329 SM00823 Phosphopantetheine attachment site AMES_3329 SM00825 Beta-ketoacyl synthase AMES_3329 SM00826 AMES_3329 AMES_3329 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_3336 SM00822 AMES_3336 AMES_3337 SM00822 AMES_3337 AMES_3339 SM00882 Coenzyme A transferase AMES_3340 SM00882 Coenzyme A transferase AMES_3353 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_3353 SM00895 AMES_3353 AMES_3354 SM00477 DNA/RNA non-specific endonuclease AMES_3354 SM00892 DNA/RNA non-specific endonuclease AMES_3355 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_3359 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain AMES_3359 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_3366 SM00354 helix_turn _helix lactose operon repressor AMES_3367 SM00458 Ricin-type beta-trefoil AMES_3372 SM00458 Ricin-type beta-trefoil AMES_3384 SM00354 helix_turn _helix lactose operon repressor AMES_3395 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_3399 SM00849 Metallo-beta-lactamase superfamily AMES_3400 SM00530 Helix-turn-helix XRE-family like proteins AMES_3410 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMES_3420 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_3425 SM00382 ATPases associated with a variety of cellular activities AMES_3426 SM00382 ATPases associated with a variety of cellular activities AMES_3432 SM00822 AMES_3432 AMES_3437 SM00530 Helix-turn-helix XRE-family like proteins AMES_3438 SM00829 Enoylreductase AMES_3439 SM00606 Cellulose Binding Domain Type IV AMES_3444 SM01007 Class II Aldolase and Adducin N-terminal domain AMES_3450 SM00062 Bacterial periplasmic substrate-binding proteins AMES_3451 SM00382 ATPases associated with a variety of cellular activities AMES_3451 SM00421 helix_turn_helix, Lux Regulon AMES_3457 SM00822 AMES_3457 AMES_3458 SM00823 Phosphopantetheine attachment site AMES_3459 SM00825 Beta-ketoacyl synthase AMES_3460 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_3460 SM00895 AMES_3460 AMES_3465 SM00829 Enoylreductase AMES_3468 SM00421 helix_turn_helix, Lux Regulon AMES_3486 SM00487 DEAD-like helicases superfamily AMES_3486 SM00490 helicase superfamily c-terminal domain AMES_3488 SM00382 ATPases associated with a variety of cellular activities AMES_3501 SM00448 cheY-homologous receiver domain AMES_3501 SM00862 Transcriptional regulatory protein, C terminal AMES_3502 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_3502 SM00387 Histidine kinase-like ATPases AMES_3502 SM00388 His Kinase A (phosphoacceptor) domain AMES_3505 SM00382 ATPases associated with a variety of cellular activities AMES_3507 SM00829 Enoylreductase AMES_3512 SM00387 Histidine kinase-like ATPases AMES_3513 SM00421 helix_turn_helix, Lux Regulon AMES_3513 SM00448 cheY-homologous receiver domain AMES_3518 SM00448 cheY-homologous receiver domain AMES_3520 SM00530 Helix-turn-helix XRE-family like proteins AMES_3524 SM00342 helix_turn_helix, arabinose operon control protein AMES_3528 SM00530 Helix-turn-helix XRE-family like proteins AMES_3539 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_3540 SM00458 Ricin-type beta-trefoil AMES_3541 SM00448 cheY-homologous receiver domain AMES_3541 SM00862 Transcriptional regulatory protein, C terminal AMES_3542 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_3542 SM00387 Histidine kinase-like ATPases AMES_3542 SM00388 His Kinase A (phosphoacceptor) domain AMES_3551 SM00138 Methyltransferase, chemotaxis proteins AMES_3556 SM00829 Enoylreductase AMES_3558 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMES_3558 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMES_3559 SM00947 Carbonic anhydrase AMES_3568 SM00822 AMES_3568 AMES_3569 SM00320 WD40 repeats AMES_3572 SM00422 helix_turn_helix, mercury resistance AMES_3578 SM00641 Glycosyl hydrolases family 25 AMES_3581 SM00028 Tetratricopeptide repeats AMES_3581 SM00862 Transcriptional regulatory protein, C terminal AMES_3581 SM01043 Bacterial transcriptional activator domain AMES_3582 SM00421 helix_turn_helix, Lux Regulon AMES_3592 SM00382 ATPases associated with a variety of cellular activities AMES_3600 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMES_3601 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMES_3604 SM00776 AMES_3604 AMES_3625 SM00829 Enoylreductase AMES_3639 SM00458 Ricin-type beta-trefoil AMES_3640 SM00823 Phosphopantetheine attachment site AMES_3640 SM00824 Thioesterase AMES_3640 SM00825 Beta-ketoacyl synthase AMES_3640 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_3642 SM00823 Phosphopantetheine attachment site AMES_3647 SM00900 AMES_3647 AMES_3649 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_3649 SM00387 Histidine kinase-like ATPases AMES_3649 SM00388 His Kinase A (phosphoacceptor) domain AMES_3650 SM00448 cheY-homologous receiver domain AMES_3650 SM00862 Transcriptional regulatory protein, C terminal AMES_3652 SM00421 helix_turn_helix, Lux Regulon AMES_3652 SM00448 cheY-homologous receiver domain AMES_3663 SM00344 helix_turn_helix ASNC type AMES_3665 SM00829 Enoylreductase AMES_3668 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_3670 SM00060 Fibronectin type 3 domain AMES_3670 SM00458 Ricin-type beta-trefoil AMES_3676 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMES_3681 SM00829 Enoylreductase AMES_3682 SM00530 Helix-turn-helix XRE-family like proteins AMES_3684 SM00331 Sigma factor PP2C-like phosphatases AMES_3684 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMES_3689 SM00641 Glycosyl hydrolases family 25 AMES_3698 SM00382 ATPases associated with a variety of cellular activities AMES_3699 SM00382 ATPases associated with a variety of cellular activities AMES_3702 SM00458 Ricin-type beta-trefoil AMES_3703 SM00458 Ricin-type beta-trefoil AMES_3707 SM00342 helix_turn_helix, arabinose operon control protein AMES_3717 SM00205 Thaumatin family AMES_3721 SM00448 cheY-homologous receiver domain AMES_3721 SM00862 Transcriptional regulatory protein, C terminal AMES_3722 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_3722 SM00387 Histidine kinase-like ATPases AMES_3722 SM00388 His Kinase A (phosphoacceptor) domain AMES_3729 SM00421 helix_turn_helix, Lux Regulon AMES_3732 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_3735 SM00530 Helix-turn-helix XRE-family like proteins AMES_3755 SM00560 LamG-like jellyroll fold domain AMES_3761 SM00862 Transcriptional regulatory protein, C terminal AMES_3761 SM01043 Bacterial transcriptional activator domain AMES_3765 SM00829 Enoylreductase AMES_3769 SM00829 Enoylreductase AMES_3773 SM00822 AMES_3773 AMES_3779 SM00382 ATPases associated with a variety of cellular activities AMES_3780 SM00382 ATPases associated with a variety of cellular activities AMES_3789 SM00507 HNH nucleases AMES_3793 SM00849 Metallo-beta-lactamase superfamily AMES_3796 SM00881 CoA binding domain AMES_3814 SM00822 AMES_3814 AMES_3816 SM00822 AMES_3816 AMES_3825 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_3825 SM00895 AMES_3825 AMES_3827 SM00342 helix_turn_helix, arabinose operon control protein AMES_3833 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_3833 SM00895 AMES_3833 AMES_3834 SM00822 AMES_3834 AMES_3844 SM00028 Tetratricopeptide repeats AMES_3857 SM00421 helix_turn_helix, Lux Regulon AMES_3863 SM00421 helix_turn_helix, Lux Regulon AMES_3866 SM00060 Fibronectin type 3 domain AMES_3872 SM00420 helix_turn_helix, Deoxyribose operon repressor AMES_3872 SM01134 AMES_3872 AMES_3878 SM00458 Ricin-type beta-trefoil AMES_3881 SM00822 AMES_3881 AMES_3881 SM00823 Phosphopantetheine attachment site AMES_3881 SM00825 Beta-ketoacyl synthase AMES_3881 SM00826 AMES_3881 AMES_3881 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_3881 SM01294 AMES_3881 AMES_3883 SM00829 Enoylreductase AMES_3885 SM00060 Fibronectin type 3 domain AMES_3885 SM01067 Cellulose binding domain AMES_3886 SM00458 Ricin-type beta-trefoil AMES_3887 SM00458 Ricin-type beta-trefoil AMES_3893 SM00862 Transcriptional regulatory protein, C terminal AMES_3893 SM01043 Bacterial transcriptional activator domain AMES_3894 SM00382 ATPases associated with a variety of cellular activities AMES_3898 SM00422 helix_turn_helix, mercury resistance AMES_3904 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_3908 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_3908 SM00895 AMES_3908 AMES_3915 SM00822 AMES_3915 AMES_3915 SM00823 Phosphopantetheine attachment site AMES_3915 SM00825 Beta-ketoacyl synthase AMES_3916 SM00823 Phosphopantetheine attachment site AMES_3916 SM00824 Thioesterase AMES_3923 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_3928 SM00382 ATPases associated with a variety of cellular activities AMES_3933 SM00829 Enoylreductase AMES_3937 SM00458 Ricin-type beta-trefoil AMES_3938 SM00458 Ricin-type beta-trefoil AMES_3943 SM00637 AMES_3943 AMES_3945 SM00458 Ricin-type beta-trefoil AMES_3946 SM00458 Ricin-type beta-trefoil AMES_3947 SM00458 Ricin-type beta-trefoil AMES_3947 SM00633 Glycosyl hydrolase family 10 AMES_3948 SM00829 Enoylreductase AMES_3951 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_3954 SM01217 AMES_3954 AMES_3957 SM00633 Glycosyl hydrolase family 10 AMES_3957 SM00637 AMES_3957 AMES_3960 SM00825 Beta-ketoacyl synthase AMES_3966 SM00862 Transcriptional regulatory protein, C terminal AMES_3966 SM01043 Bacterial transcriptional activator domain AMES_3972 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_3973 SM00028 Tetratricopeptide repeats AMES_3973 SM00530 Helix-turn-helix XRE-family like proteins AMES_3973 SM00862 Transcriptional regulatory protein, C terminal AMES_3973 SM01043 Bacterial transcriptional activator domain AMES_3977 SM00421 helix_turn_helix, Lux Regulon AMES_3977 SM00448 cheY-homologous receiver domain AMES_3979 SM00382 ATPases associated with a variety of cellular activities AMES_3982 SM00823 Phosphopantetheine attachment site AMES_3986 SM00823 Phosphopantetheine attachment site AMES_3986 SM00824 Thioesterase AMES_3988 SM00923 MbtH-like protein AMES_3990 SM00382 ATPases associated with a variety of cellular activities AMES_3994 SM00822 AMES_3994 AMES_3996 SM00825 Beta-ketoacyl synthase AMES_3998 SM01043 Bacterial transcriptional activator domain AMES_4004 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_4004 SM00387 Histidine kinase-like ATPases AMES_4004 SM00388 His Kinase A (phosphoacceptor) domain AMES_4005 SM00448 cheY-homologous receiver domain AMES_4005 SM00862 Transcriptional regulatory protein, C terminal AMES_4017 SM00823 Phosphopantetheine attachment site AMES_4017 SM01294 AMES_4017 AMES_4018 SM00823 Phosphopantetheine attachment site AMES_4018 SM00825 Beta-ketoacyl synthase AMES_4020 SM00237 Domains in Na-Ca exchangers and integrin-beta4 AMES_4034 SM00422 helix_turn_helix, mercury resistance AMES_4035 SM00422 helix_turn_helix, mercury resistance AMES_4040 SM00354 helix_turn _helix lactose operon repressor AMES_4044 SM00637 AMES_4044 AMES_4048 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_4049 SM00637 AMES_4049 AMES_4051 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_4051 SM00091 PAS domain AMES_4051 SM00331 Sigma factor PP2C-like phosphatases AMES_4063 SM00155 Phospholipase D. Active site motifs. AMES_4068 SM00346 helix_turn_helix isocitrate lyase regulation AMES_4071 SM00382 ATPases associated with a variety of cellular activities AMES_4073 SM00822 AMES_4073 AMES_4085 SM00091 PAS domain AMES_4085 SM00138 Methyltransferase, chemotaxis proteins AMES_4105 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMES_4116 SM00631 AMES_4116 AMES_4118 SM00878 Biotin carboxylase C-terminal domain AMES_4122 SM00481 DNA polymerase alpha chain like domain AMES_4125 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_4141 SM00487 DEAD-like helicases superfamily AMES_4141 SM00490 helicase superfamily c-terminal domain AMES_4142 SM01012 AMES_4142 AMES_4145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_4145 SM01012 AMES_4145 AMES_4146 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_4146 SM01012 AMES_4146 AMES_4163 SM00530 Helix-turn-helix XRE-family like proteins AMES_4165 SM00530 Helix-turn-helix XRE-family like proteins AMES_4167 SM00710 Parallel beta-helix repeats AMES_4169 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMES_4186 SM00344 helix_turn_helix ASNC type AMES_4190 SM00421 helix_turn_helix, Lux Regulon AMES_4190 SM00448 cheY-homologous receiver domain AMES_4193 SM00637 AMES_4193 AMES_4194 SM00507 HNH nucleases AMES_4195 SM00387 Histidine kinase-like ATPases AMES_4205 SM00422 helix_turn_helix, mercury resistance AMES_4218 SM00984 UDP binding domain AMES_4220 SM00822 AMES_4220 AMES_4233 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_4245 SM00704 CDGSH-type zinc finger. Function unknown. AMES_4246 SM01236 AMES_4246 AMES_4256 SM00382 ATPases associated with a variety of cellular activities AMES_4262 SM00028 Tetratricopeptide repeats AMES_4262 SM00862 Transcriptional regulatory protein, C terminal AMES_4262 SM01043 Bacterial transcriptional activator domain AMES_4268 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_4278 SM00829 Enoylreductase AMES_4282 SM00382 ATPases associated with a variety of cellular activities AMES_4282 SM00530 Helix-turn-helix XRE-family like proteins AMES_4285 SM00822 AMES_4285 AMES_4287 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_4288 SM00867 YceI-like domain AMES_4295 SM00354 helix_turn _helix lactose operon repressor AMES_4296 SM00606 Cellulose Binding Domain Type IV AMES_4296 SM01217 AMES_4296 AMES_4300 SM00052 Putative diguanylate phosphodiesterase AMES_4300 SM00091 PAS domain AMES_4300 SM00267 diguanylate cyclase AMES_4304 SM00240 Forkhead associated domain AMES_4314 SM00028 Tetratricopeptide repeats AMES_4324 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_4325 SM00421 helix_turn_helix, Lux Regulon AMES_4325 SM00448 cheY-homologous receiver domain AMES_4333 SM00354 helix_turn _helix lactose operon repressor AMES_4335 SM00776 AMES_4335 AMES_4335 SM01029 Beta-galactosidase, domain 2 AMES_4338 SM00637 AMES_4338 AMES_4338 SM00710 Parallel beta-helix repeats AMES_4342 SM00354 helix_turn _helix lactose operon repressor AMES_4344 SM00382 ATPases associated with a variety of cellular activities AMES_4347 SM00560 LamG-like jellyroll fold domain AMES_4347 SM00813 Alpha-L-arabinofuranosidase C-terminus AMES_4349 SM01007 Class II Aldolase and Adducin N-terminal domain AMES_4352 SM00382 ATPases associated with a variety of cellular activities AMES_4358 SM00346 helix_turn_helix isocitrate lyase regulation AMES_4364 SM00829 Enoylreductase AMES_4366 SM00028 Tetratricopeptide repeats AMES_4366 SM00382 ATPases associated with a variety of cellular activities AMES_4366 SM00862 Transcriptional regulatory protein, C terminal AMES_4366 SM01043 Bacterial transcriptional activator domain AMES_4370 SM00344 helix_turn_helix ASNC type AMES_4373 SM00354 helix_turn _helix lactose operon repressor AMES_4382 SM00656 AMES_4382 AMES_4386 SM01029 Beta-galactosidase, domain 2 AMES_4387 SM00862 Transcriptional regulatory protein, C terminal AMES_4387 SM01043 Bacterial transcriptional activator domain AMES_4398 SM00382 ATPases associated with a variety of cellular activities AMES_4407 SM00829 Enoylreductase AMES_4412 SM00422 helix_turn_helix, mercury resistance AMES_4417 SM00838 Elongation factor G C-terminus AMES_4417 SM00889 Elongation factor G, domain IV AMES_4425 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_4427 SM00823 Phosphopantetheine attachment site AMES_4427 SM00824 Thioesterase AMES_4427 SM00825 Beta-ketoacyl synthase AMES_4427 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_4431 SM00822 AMES_4431 AMES_4438 SM00822 AMES_4438 AMES_4442 SM00028 Tetratricopeptide repeats AMES_4447 SM00420 helix_turn_helix, Deoxyribose operon repressor AMES_4447 SM01134 AMES_4447 AMES_4452 SM01217 AMES_4452 AMES_4453 SM00354 helix_turn _helix lactose operon repressor AMES_4458 SM00354 helix_turn _helix lactose operon repressor AMES_4460 SM00633 Glycosyl hydrolase family 10 AMES_4462 SM00357 Cold shock protein domain AMES_4463 SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. AMES_4471 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_4471 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_4471 SM00387 Histidine kinase-like ATPases AMES_4471 SM00388 His Kinase A (phosphoacceptor) domain AMES_4471 SM00448 cheY-homologous receiver domain AMES_4472 SM00331 Sigma factor PP2C-like phosphatases AMES_4472 SM01012 AMES_4472 AMES_4480 SM00736 Dystroglycan-type cadherin-like domains. AMES_4483 SM00354 helix_turn _helix lactose operon repressor AMES_4484 SM00382 ATPases associated with a variety of cellular activities AMES_4490 SM01007 Class II Aldolase and Adducin N-terminal domain AMES_4493 SM00421 helix_turn_helix, Lux Regulon AMES_4493 SM00448 cheY-homologous receiver domain AMES_4496 SM00354 helix_turn _helix lactose operon repressor AMES_4502 SM00342 helix_turn_helix, arabinose operon control protein AMES_4514 SM00881 CoA binding domain AMES_4518 SM00881 CoA binding domain AMES_4520 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_4520 SM00895 AMES_4520 AMES_4523 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMES_4524 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMES_4528 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMES_4530 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMES_4542 SM01038 Beta galactosidase small chain AMES_4543 SM00354 helix_turn _helix lactose operon repressor AMES_4549 SM00822 AMES_4549 AMES_4549 SM00825 Beta-ketoacyl synthase AMES_4549 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_4550 SM00825 Beta-ketoacyl synthase AMES_4550 SM00826 AMES_4550 AMES_4550 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_4554 SM00822 AMES_4554 AMES_4560 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain AMES_4560 SM00710 Parallel beta-helix repeats AMES_4568 SM00354 helix_turn _helix lactose operon repressor AMES_4573 SM00422 helix_turn_helix, mercury resistance AMES_4581 SM00855 Phosphoglycerate mutase family AMES_4585 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_4593 SM00342 helix_turn_helix, arabinose operon control protein AMES_4595 SM00829 Enoylreductase AMES_4602 SM00382 ATPases associated with a variety of cellular activities AMES_4612 SM00244 prohibitin homologues AMES_4613 SM00244 prohibitin homologues AMES_4616 SM00198 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. AMES_4622 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_4633 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_4638 SM00342 helix_turn_helix, arabinose operon control protein AMES_4648 SM00382 ATPases associated with a variety of cellular activities AMES_4650 SM00487 DEAD-like helicases superfamily AMES_4650 SM00490 helicase superfamily c-terminal domain AMES_4658 SM00530 Helix-turn-helix XRE-family like proteins AMES_4661 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_4672 SM00420 helix_turn_helix, Deoxyribose operon repressor AMES_4672 SM01134 AMES_4672 AMES_4679 SM00342 helix_turn_helix, arabinose operon control protein AMES_4684 SM00028 Tetratricopeptide repeats AMES_4684 SM00862 Transcriptional regulatory protein, C terminal AMES_4684 SM01043 Bacterial transcriptional activator domain AMES_4686 SM01260 AMES_4686 AMES_4688 SM01043 Bacterial transcriptional activator domain AMES_4699 SM00530 Helix-turn-helix XRE-family like proteins AMES_4701 SM01209 AMES_4701 AMES_4707 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_4708 SM00823 Phosphopantetheine attachment site AMES_4709 SM00923 MbtH-like protein AMES_4710 SM00823 Phosphopantetheine attachment site AMES_4711 SM00823 Phosphopantetheine attachment site AMES_4717 SM00862 Transcriptional regulatory protein, C terminal AMES_4717 SM01043 Bacterial transcriptional activator domain AMES_4720 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_4728 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_4729 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_4729 SM00895 AMES_4729 AMES_4734 SM00923 MbtH-like protein AMES_4735 SM00823 Phosphopantetheine attachment site AMES_4741 SM00823 Phosphopantetheine attachment site AMES_4741 SM00824 Thioesterase AMES_4745 SM00823 Phosphopantetheine attachment site AMES_4746 SM01043 Bacterial transcriptional activator domain AMES_4748 SM00028 Tetratricopeptide repeats AMES_4748 SM00382 ATPases associated with a variety of cellular activities AMES_4748 SM00862 Transcriptional regulatory protein, C terminal AMES_4748 SM01043 Bacterial transcriptional activator domain AMES_4750 SM00422 helix_turn_helix, mercury resistance AMES_4750 SM00567 E-Z type HEAT repeats AMES_4758 SM00458 Ricin-type beta-trefoil AMES_4762 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_4764 SM00849 Metallo-beta-lactamase superfamily AMES_4767 SM00421 helix_turn_helix, Lux Regulon AMES_4767 SM00448 cheY-homologous receiver domain AMES_4768 SM00421 helix_turn_helix, Lux Regulon AMES_4770 SM00327 von Willebrand factor (vWF) type A domain AMES_4786 SM00382 ATPases associated with a variety of cellular activities AMES_4789 SM00710 Parallel beta-helix repeats AMES_4792 SM00346 helix_turn_helix isocitrate lyase regulation AMES_4792 SM00419 helix_turn_helix, cAMP Regulatory protein AMES_4796 SM00829 Enoylreductase AMES_4801 SM00382 ATPases associated with a variety of cellular activities AMES_4803 SM00382 ATPases associated with a variety of cellular activities AMES_4805 SM00822 AMES_4805 AMES_4806 SM00450 Rhodanese Homology Domain AMES_4813 SM00344 helix_turn_helix ASNC type AMES_4816 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMES_4816 SM00475 5'-3' exonuclease AMES_4819 SM00487 DEAD-like helicases superfamily AMES_4819 SM00490 helicase superfamily c-terminal domain AMES_4819 SM01142 AMES_4819 AMES_4820 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMES_4828 SM00829 Enoylreductase AMES_4832 SM00014 Acid phosphatase homologues AMES_4832 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMES_4842 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_4846 SM00382 ATPases associated with a variety of cellular activities AMES_4858 SM00342 helix_turn_helix, arabinose operon control protein AMES_4858 SM00478 endonuclease III AMES_4858 SM01009 AlkA N-terminal domain AMES_4860 SM01018 B12 binding domain AMES_4868 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_4869 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_4870 SM00382 ATPases associated with a variety of cellular activities AMES_4872 SM00422 helix_turn_helix, mercury resistance AMES_4874 SM00327 von Willebrand factor (vWF) type A domain AMES_4882 SM00822 AMES_4882 AMES_4884 SM00448 cheY-homologous receiver domain AMES_4884 SM00862 Transcriptional regulatory protein, C terminal AMES_4885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_4885 SM00387 Histidine kinase-like ATPases AMES_4885 SM00388 His Kinase A (phosphoacceptor) domain AMES_4890 SM00327 von Willebrand factor (vWF) type A domain AMES_4908 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMES_4914 SM01091 Transporter associated domain AMES_4919 SM00530 Helix-turn-helix XRE-family like proteins AMES_4925 SM00422 helix_turn_helix, mercury resistance AMES_4928 SM00422 helix_turn_helix, mercury resistance AMES_4930 SM00422 helix_turn_helix, mercury resistance AMES_4931 SM00240 Forkhead associated domain AMES_4942 SM00382 ATPases associated with a variety of cellular activities AMES_4948 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_4957 SM00346 helix_turn_helix isocitrate lyase regulation AMES_4962 SM00062 Bacterial periplasmic substrate-binding proteins AMES_4963 SM00382 ATPases associated with a variety of cellular activities AMES_4965 SM00849 Metallo-beta-lactamase superfamily AMES_4966 SM00896 Ferredoxin-fold anticodon binding domain AMES_4970 SM00382 ATPases associated with a variety of cellular activities AMES_4971 SM00923 MbtH-like protein AMES_4974 SM00823 Phosphopantetheine attachment site AMES_4977 SM00382 ATPases associated with a variety of cellular activities AMES_4986 SM00382 ATPases associated with a variety of cellular activities AMES_4989 SM00060 Fibronectin type 3 domain AMES_4989 SM00636 AMES_4989 AMES_4989 SM00637 AMES_4989 AMES_4996 SM00028 Tetratricopeptide repeats AMES_5004 SM00633 Glycosyl hydrolase family 10 AMES_5007 SM00060 Fibronectin type 3 domain AMES_5007 SM00637 AMES_5007 AMES_5008 SM00060 Fibronectin type 3 domain AMES_5008 SM00637 AMES_5008 AMES_5011 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_5012 SM00354 helix_turn _helix lactose operon repressor AMES_5013 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_5016 SM00382 ATPases associated with a variety of cellular activities AMES_5017 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_5017 SM00387 Histidine kinase-like ATPases AMES_5017 SM00388 His Kinase A (phosphoacceptor) domain AMES_5018 SM00448 cheY-homologous receiver domain AMES_5018 SM00862 Transcriptional regulatory protein, C terminal AMES_5021 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5024 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5036 SM00382 ATPases associated with a variety of cellular activities AMES_5040 SM00994 ClpX C4-type zinc finger AMES_5041 SM00944 Pro-kumamolisin, activation domain AMES_5044 SM00641 Glycosyl hydrolases family 25 AMES_5046 SM00729 Elongator protein 3, MiaB family, Radical SAM AMES_5056 SM00530 Helix-turn-helix XRE-family like proteins AMES_5086 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5091 SM00458 Ricin-type beta-trefoil AMES_5094 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5099 SM00448 cheY-homologous receiver domain AMES_5100 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMES_5100 SM00091 PAS domain AMES_5100 SM00387 Histidine kinase-like ATPases AMES_5102 SM00421 helix_turn_helix, Lux Regulon AMES_5102 SM00448 cheY-homologous receiver domain AMES_5111 SM00421 helix_turn_helix, Lux Regulon AMES_5113 SM01018 B12 binding domain AMES_5117 SM00637 AMES_5117 AMES_5118 SM00829 Enoylreductase AMES_5123 SM00637 AMES_5123 AMES_5126 SM00637 AMES_5126 AMES_5127 SM00354 helix_turn _helix lactose operon repressor AMES_5129 SM00637 AMES_5129 AMES_5130 SM00637 AMES_5130 AMES_5131 SM00637 AMES_5131 AMES_5132 SM00354 helix_turn _helix lactose operon repressor AMES_5139 SM00116 Domain in cystathionine beta-synthase and other proteins. AMES_5140 SM00986 Uracil DNA glycosylase superfamily AMES_5140 SM00987 UreE urease accessory protein, C-terminal domain AMES_5143 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AMES_5146 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_5146 SM01012 AMES_5146 AMES_5152 SM00880 AMES_5152 AMES_5152 SM01118 AMES_5152 AMES_5154 SM01012 AMES_5154 AMES_5166 SM00812 Alpha-L-fucosidase AMES_5178 SM00507 HNH nucleases AMES_5181 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMES_5183 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMES_5187 SM01217 AMES_5187 AMES_5188 SM00354 helix_turn _helix lactose operon repressor AMES_5191 SM00849 Metallo-beta-lactamase superfamily AMES_5192 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5200 SM00996 S-adenosyl-L-homocysteine hydrolase AMES_5200 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMES_5203 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AMES_5207 SM00960 Roadblock/LC7 domain AMES_5208 SM00387 Histidine kinase-like ATPases AMES_5210 SM00382 ATPases associated with a variety of cellular activities AMES_5211 SM00382 ATPases associated with a variety of cellular activities AMES_5215 SM00028 Tetratricopeptide repeats AMES_5215 SM00862 Transcriptional regulatory protein, C terminal AMES_5215 SM01043 Bacterial transcriptional activator domain AMES_5217 SM00342 helix_turn_helix, arabinose operon control protein AMES_5220 SM00849 Metallo-beta-lactamase superfamily AMES_5226 SM00421 helix_turn_helix, Lux Regulon AMES_5228 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMES_5230 SM00954 Region found in RelA / SpoT proteins AMES_5235 SM01323 AMES_5235 AMES_5236 SM00382 ATPases associated with a variety of cellular activities AMES_5245 SM00530 Helix-turn-helix XRE-family like proteins AMES_5249 SM00823 Phosphopantetheine attachment site AMES_5250 SM00824 Thioesterase AMES_5252 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_5254 SM00838 Elongation factor G C-terminus AMES_5254 SM00889 Elongation factor G, domain IV AMES_5262 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5264 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMES_5269 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMES_5274 SM00822 AMES_5274 AMES_5277 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_5280 SM00344 helix_turn_helix ASNC type AMES_5281 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5295 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMES_5298 SM00710 Parallel beta-helix repeats AMES_5305 SM00420 helix_turn_helix, Deoxyribose operon repressor AMES_5319 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_5319 SM00895 AMES_5319 AMES_5331 SM00823 Phosphopantetheine attachment site AMES_5338 SM00421 helix_turn_helix, Lux Regulon AMES_5338 SM00448 cheY-homologous receiver domain AMES_5339 SM00387 Histidine kinase-like ATPases AMES_5341 SM00382 ATPases associated with a variety of cellular activities AMES_5344 SM00823 Phosphopantetheine attachment site AMES_5351 SM00382 ATPases associated with a variety of cellular activities AMES_5356 SM00862 Transcriptional regulatory protein, C terminal AMES_5356 SM01043 Bacterial transcriptional activator domain AMES_5365 SM00822 AMES_5365 AMES_5369 SM00825 Beta-ketoacyl synthase AMES_5370 SM00825 Beta-ketoacyl synthase AMES_5388 SM00028 Tetratricopeptide repeats AMES_5388 SM00530 Helix-turn-helix XRE-family like proteins AMES_5394 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_5401 SM00831 Cation transporter/ATPase, N-terminus AMES_5405 SM00881 CoA binding domain AMES_5406 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_5408 SM00421 helix_turn_helix, Lux Regulon AMES_5408 SM00448 cheY-homologous receiver domain AMES_5411 SM00382 ATPases associated with a variety of cellular activities AMES_5414 SM00116 Domain in cystathionine beta-synthase and other proteins. AMES_5416 SM00116 Domain in cystathionine beta-synthase and other proteins. AMES_5425 SM00421 helix_turn_helix, Lux Regulon AMES_5425 SM00448 cheY-homologous receiver domain AMES_5427 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_5427 SM01012 AMES_5427 AMES_5430 SM00448 cheY-homologous receiver domain AMES_5435 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5436 SM00849 Metallo-beta-lactamase superfamily AMES_5440 SM00387 Histidine kinase-like ATPases AMES_5441 SM00421 helix_turn_helix, Lux Regulon AMES_5441 SM00448 cheY-homologous receiver domain AMES_5443 SM00710 Parallel beta-helix repeats AMES_5444 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_5452 SM00855 Phosphoglycerate mutase family AMES_5455 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AMES_5456 SM00560 LamG-like jellyroll fold domain AMES_5463 SM00267 diguanylate cyclase AMES_5465 SM00458 Ricin-type beta-trefoil AMES_5474 SM00382 ATPases associated with a variety of cellular activities AMES_5475 SM00382 ATPases associated with a variety of cellular activities AMES_5489 SM00346 helix_turn_helix isocitrate lyase regulation AMES_5492 SM00028 Tetratricopeptide repeats AMES_5495 SM01012 AMES_5495 AMES_5498 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5502 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_5502 SM00387 Histidine kinase-like ATPases AMES_5503 SM00421 helix_turn_helix, Lux Regulon AMES_5503 SM00448 cheY-homologous receiver domain AMES_5505 SM00749 bacterial OsmY and nodulation domain AMES_5506 SM00244 prohibitin homologues AMES_5509 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_5509 SM01012 AMES_5509 AMES_5510 SM01012 AMES_5510 AMES_5527 SM00458 Ricin-type beta-trefoil AMES_5529 SM00448 cheY-homologous receiver domain AMES_5529 SM00862 Transcriptional regulatory protein, C terminal AMES_5530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_5530 SM00387 Histidine kinase-like ATPases AMES_5530 SM00388 His Kinase A (phosphoacceptor) domain AMES_5537 SM00822 AMES_5537 AMES_5541 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_5544 SM00458 Ricin-type beta-trefoil AMES_5546 SM00822 AMES_5546 AMES_5552 SM00637 AMES_5552 AMES_5561 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5568 SM00421 helix_turn_helix, Lux Regulon AMES_5569 SM00421 helix_turn_helix, Lux Regulon AMES_5575 SM00822 AMES_5575 AMES_5578 SM00421 helix_turn_helix, Lux Regulon AMES_5581 SM00382 ATPases associated with a variety of cellular activities AMES_5593 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_5593 SM00387 Histidine kinase-like ATPases AMES_5593 SM00388 His Kinase A (phosphoacceptor) domain AMES_5594 SM00448 cheY-homologous receiver domain AMES_5594 SM00862 Transcriptional regulatory protein, C terminal AMES_5628 SM00346 helix_turn_helix isocitrate lyase regulation AMES_5633 SM00357 Cold shock protein domain AMES_5640 SM00560 LamG-like jellyroll fold domain AMES_5640 SM01038 Beta galactosidase small chain AMES_5652 SM00448 cheY-homologous receiver domain AMES_5652 SM00862 Transcriptional regulatory protein, C terminal AMES_5653 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_5653 SM00387 Histidine kinase-like ATPases AMES_5653 SM00388 His Kinase A (phosphoacceptor) domain AMES_5655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_5657 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5681 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMES_5686 SM00530 Helix-turn-helix XRE-family like proteins AMES_5689 SM00530 Helix-turn-helix XRE-family like proteins AMES_5696 SM00354 helix_turn _helix lactose operon repressor AMES_5700 SM00421 helix_turn_helix, Lux Regulon AMES_5701 SM00354 helix_turn _helix lactose operon repressor AMES_5703 SM00849 Metallo-beta-lactamase superfamily AMES_5705 SM00342 helix_turn_helix, arabinose operon control protein AMES_5712 SM00028 Tetratricopeptide repeats AMES_5730 SM01101 AMES_5730 AMES_5745 SM00320 WD40 repeats AMES_5747 SM00857 Resolvase, N terminal domain AMES_5748 SM00637 AMES_5748 AMES_5754 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_5755 SM00422 helix_turn_helix, mercury resistance AMES_5755 SM00871 Bacterial transcription activator, effector binding domain AMES_5757 SM00368 Leucine rich repeat, ribonuclease inhibitor type AMES_5759 SM00420 helix_turn_helix, Deoxyribose operon repressor AMES_5759 SM01134 AMES_5759 AMES_5768 SM00327 von Willebrand factor (vWF) type A domain AMES_5769 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_5772 SM00382 ATPases associated with a variety of cellular activities AMES_5773 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_5776 SM00507 HNH nucleases AMES_5777 SM00344 helix_turn_helix ASNC type AMES_5778 SM00421 helix_turn_helix, Lux Regulon AMES_5778 SM00448 cheY-homologous receiver domain AMES_5782 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5796 SM00382 ATPases associated with a variety of cellular activities AMES_5799 SM00633 Glycosyl hydrolase family 10 AMES_5799 SM00637 AMES_5799 AMES_5800 SM00530 Helix-turn-helix XRE-family like proteins AMES_5804 SM00855 Phosphoglycerate mutase family AMES_5805 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_5805 SM00331 Sigma factor PP2C-like phosphatases AMES_5808 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_5808 SM00331 Sigma factor PP2C-like phosphatases AMES_5810 SM00091 PAS domain AMES_5810 SM00331 Sigma factor PP2C-like phosphatases AMES_5810 SM00387 Histidine kinase-like ATPases AMES_5810 SM00388 His Kinase A (phosphoacceptor) domain AMES_5810 SM00448 cheY-homologous receiver domain AMES_5812 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_5812 SM01012 AMES_5812 AMES_5821 SM00028 Tetratricopeptide repeats AMES_5821 SM00862 Transcriptional regulatory protein, C terminal AMES_5821 SM01043 Bacterial transcriptional activator domain AMES_5822 SM00530 Helix-turn-helix XRE-family like proteins AMES_5841 SM00530 Helix-turn-helix XRE-family like proteins AMES_5847 SM00382 ATPases associated with a variety of cellular activities AMES_5852 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_5868 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_5881 SM00327 von Willebrand factor (vWF) type A domain AMES_5889 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_5890 SM01130 AMES_5890 AMES_5892 SM00346 helix_turn_helix isocitrate lyase regulation AMES_5898 SM00421 helix_turn_helix, Lux Regulon AMES_5898 SM00448 cheY-homologous receiver domain AMES_5905 SM00342 helix_turn_helix, arabinose operon control protein AMES_5912 SM00823 Phosphopantetheine attachment site AMES_5913 SM00382 ATPases associated with a variety of cellular activities AMES_5914 SM00563 Phosphate acyltransferases AMES_5919 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_5922 SM00363 S4 RNA-binding domain AMES_5932 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_5932 SM00895 AMES_5932 AMES_5940 SM00829 Enoylreductase AMES_5941 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_5944 SM00363 S4 RNA-binding domain AMES_5960 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMES_5965 SM00873 B3/4 domain AMES_5965 SM00874 tRNA synthetase B5 domain AMES_5965 SM00896 Ferredoxin-fold anticodon binding domain AMES_5973 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_5973 SM00895 AMES_5973 AMES_5976 SM00346 helix_turn_helix isocitrate lyase regulation AMES_5978 SM01119 AMES_5978 AMES_5987 SM00448 cheY-homologous receiver domain AMES_5988 SM00091 PAS domain AMES_5988 SM00387 Histidine kinase-like ATPases AMES_5999 SM00849 Metallo-beta-lactamase superfamily AMES_6004 SM00100 Cyclic nucleotide-monophosphate binding domain AMES_6004 SM00419 helix_turn_helix, cAMP Regulatory protein AMES_6013 SM00855 Phosphoglycerate mutase family AMES_6015 SM00342 helix_turn_helix, arabinose operon control protein AMES_6016 SM00354 helix_turn _helix lactose operon repressor AMES_6018 SM00953 AMES_6018 AMES_6022 SM00382 ATPases associated with a variety of cellular activities AMES_6022 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_6030 SM00487 DEAD-like helicases superfamily AMES_6030 SM00490 helicase superfamily c-terminal domain AMES_6039 SM00316 Ribosomal protein S1-like RNA-binding domain AMES_6043 SM00382 ATPases associated with a variety of cellular activities AMES_6045 SM00342 helix_turn_helix, arabinose operon control protein AMES_6047 SM00829 Enoylreductase AMES_6049 SM00054 EF-hand, calcium binding motif AMES_6050 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMES_6050 SM00474 3'-5' exonuclease AMES_6050 SM00475 5'-3' exonuclease AMES_6050 SM00482 DNA polymerase A domain AMES_6057 SM00382 ATPases associated with a variety of cellular activities AMES_6058 SM00382 ATPases associated with a variety of cellular activities AMES_6060 SM00448 cheY-homologous receiver domain AMES_6060 SM01012 AMES_6060 AMES_6085 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_6102 SM00421 helix_turn_helix, Lux Regulon AMES_6102 SM00448 cheY-homologous receiver domain AMES_6106 SM00421 helix_turn_helix, Lux Regulon AMES_6106 SM00448 cheY-homologous receiver domain AMES_6119 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_6121 SM00346 helix_turn_helix isocitrate lyase regulation AMES_6123 SM00530 Helix-turn-helix XRE-family like proteins AMES_6126 SM00342 helix_turn_helix, arabinose operon control protein AMES_6130 SM00530 Helix-turn-helix XRE-family like proteins AMES_6132 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_6132 SM01012 AMES_6132 AMES_6140 SM00823 Phosphopantetheine attachment site AMES_6141 SM00823 Phosphopantetheine attachment site AMES_6144 SM00823 Phosphopantetheine attachment site AMES_6146 SM00923 MbtH-like protein AMES_6147 SM00823 Phosphopantetheine attachment site AMES_6153 SM00823 Phosphopantetheine attachment site AMES_6154 SM00421 helix_turn_helix, Lux Regulon AMES_6178 SM00460 Transglutaminase/protease-like homologues AMES_6183 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMES_6183 SM01232 AMES_6183 AMES_6190 SM00530 Helix-turn-helix XRE-family like proteins AMES_6193 SM00729 Elongator protein 3, MiaB family, Radical SAM AMES_6200 SM00843 AMES_6200 AMES_6201 SM00563 Phosphate acyltransferases AMES_6206 SM00327 von Willebrand factor (vWF) type A domain AMES_6208 SM00849 Metallo-beta-lactamase superfamily AMES_6209 SM01130 AMES_6209 AMES_6210 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_6220 SM00530 Helix-turn-helix XRE-family like proteins AMES_6227 SM00316 Ribosomal protein S1-like RNA-binding domain AMES_6227 SM00322 K homology RNA-binding domain AMES_6228 SM01387 AMES_6228 AMES_6231 SM00904 Riboflavin kinase AMES_6249 SM00316 Ribosomal protein S1-like RNA-binding domain AMES_6260 SM00421 helix_turn_helix, Lux Regulon AMES_6260 SM00448 cheY-homologous receiver domain AMES_6264 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_6267 SM00448 cheY-homologous receiver domain AMES_6267 SM00862 Transcriptional regulatory protein, C terminal AMES_6268 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_6268 SM00387 Histidine kinase-like ATPases AMES_6268 SM00388 His Kinase A (phosphoacceptor) domain AMES_6270 SM00028 Tetratricopeptide repeats AMES_6272 SM00028 Tetratricopeptide repeats AMES_6272 SM00862 Transcriptional regulatory protein, C terminal AMES_6272 SM01043 Bacterial transcriptional activator domain AMES_6281 SM00822 AMES_6281 AMES_6295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_6298 SM00028 Tetratricopeptide repeats AMES_6298 SM00862 Transcriptional regulatory protein, C terminal AMES_6298 SM01043 Bacterial transcriptional activator domain AMES_6305 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_6309 SM00387 Histidine kinase-like ATPases AMES_6310 SM00960 Roadblock/LC7 domain AMES_6328 SM00829 Enoylreductase AMES_6338 SM00458 Ricin-type beta-trefoil AMES_6339 SM00458 Ricin-type beta-trefoil AMES_6339 SM00633 Glycosyl hydrolase family 10 AMES_6350 SM00421 helix_turn_helix, Lux Regulon AMES_6353 SM01043 Bacterial transcriptional activator domain AMES_6364 SM00028 Tetratricopeptide repeats AMES_6364 SM00862 Transcriptional regulatory protein, C terminal AMES_6364 SM01043 Bacterial transcriptional activator domain AMES_6370 SM00849 Metallo-beta-lactamase superfamily AMES_6371 SM00421 helix_turn_helix, Lux Regulon AMES_6372 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMES_6374 SM00421 helix_turn_helix, Lux Regulon AMES_6382 SM00421 helix_turn_helix, Lux Regulon AMES_6383 SM00421 helix_turn_helix, Lux Regulon AMES_6385 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_6386 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_6388 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain AMES_6395 SM00382 ATPases associated with a variety of cellular activities AMES_6397 SM00387 Histidine kinase-like ATPases AMES_6398 SM00421 helix_turn_helix, Lux Regulon AMES_6398 SM00448 cheY-homologous receiver domain AMES_6409 SM00382 ATPases associated with a variety of cellular activities AMES_6412 SM00421 helix_turn_helix, Lux Regulon AMES_6412 SM00448 cheY-homologous receiver domain AMES_6427 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_6428 SM00342 helix_turn_helix, arabinose operon control protein AMES_6432 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_6432 SM01012 AMES_6432 AMES_6439 SM00382 ATPases associated with a variety of cellular activities AMES_6446 SM01012 AMES_6446 AMES_6447 SM01012 AMES_6447 AMES_6450 SM01012 AMES_6450 AMES_6451 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_6451 SM01012 AMES_6451 AMES_6452 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_6452 SM01012 AMES_6452 AMES_6456 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_6456 SM01012 AMES_6456 AMES_6457 SM00331 Sigma factor PP2C-like phosphatases AMES_6465 SM01012 AMES_6465 AMES_6466 SM00829 Enoylreductase AMES_6472 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_6481 SM00829 Enoylreductase AMES_6482 SM00116 Domain in cystathionine beta-synthase and other proteins. AMES_6484 SM00382 ATPases associated with a variety of cellular activities AMES_6488 SM00400 zinc finger AMES_6488 SM00493 AMES_6488 AMES_6488 SM00766 DNA primase DnaG DnaB-binding AMES_6494 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_6498 SM00093 SERine Proteinase INhibitors AMES_6499 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMES_6501 SM00421 helix_turn_helix, Lux Regulon AMES_6501 SM00448 cheY-homologous receiver domain AMES_6504 SM00382 ATPases associated with a variety of cellular activities AMES_6509 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_6524 SM01091 Transporter associated domain AMES_6529 SM00271 DnaJ molecular chaperone homology domain AMES_6542 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_6542 SM00387 Histidine kinase-like ATPases AMES_6542 SM00388 His Kinase A (phosphoacceptor) domain AMES_6543 SM00448 cheY-homologous receiver domain AMES_6543 SM00862 Transcriptional regulatory protein, C terminal AMES_6554 SM00829 Enoylreductase AMES_6555 SM00729 Elongator protein 3, MiaB family, Radical SAM AMES_6571 SM00829 Enoylreductase AMES_6575 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_6576 SM00495 Chitin-binding domain type 3 AMES_6582 SM00838 Elongation factor G C-terminus AMES_6590 SM00849 Metallo-beta-lactamase superfamily AMES_6591 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMES_6594 SM00855 Phosphoglycerate mutase family AMES_6597 SM00487 DEAD-like helicases superfamily AMES_6597 SM00490 helicase superfamily c-terminal domain AMES_6599 SM00836 DALR anticodon binding domain AMES_6599 SM01016 Arginyl tRNA synthetase N terminal dom AMES_6604 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMES_6608 SM00316 Ribosomal protein S1-like RNA-binding domain AMES_6612 SM00382 ATPases associated with a variety of cellular activities AMES_6615 SM00562 AMES_6615 AMES_6627 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_6639 SM00382 ATPases associated with a variety of cellular activities AMES_6639 SM00994 ClpX C4-type zinc finger AMES_6639 SM01086 C-terminal, D2-small domain, of ClpB protein AMES_6646 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_6646 SM00387 Histidine kinase-like ATPases AMES_6646 SM00388 His Kinase A (phosphoacceptor) domain AMES_6649 SM00530 Helix-turn-helix XRE-family like proteins AMES_6653 SM00530 Helix-turn-helix XRE-family like proteins AMES_6654 SM00100 Cyclic nucleotide-monophosphate binding domain AMES_6654 SM00419 helix_turn_helix, cAMP Regulatory protein AMES_6661 SM00862 Transcriptional regulatory protein, C terminal AMES_6661 SM01043 Bacterial transcriptional activator domain AMES_6662 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMES_6670 SM00382 ATPases associated with a variety of cellular activities AMES_6676 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_6684 SM00331 Sigma factor PP2C-like phosphatases AMES_6685 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_6685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_6685 SM00387 Histidine kinase-like ATPases AMES_6685 SM00388 His Kinase A (phosphoacceptor) domain AMES_6685 SM00448 cheY-homologous receiver domain AMES_6690 SM00530 Helix-turn-helix XRE-family like proteins AMES_6696 SM00822 AMES_6696 AMES_6702 SM00606 Cellulose Binding Domain Type IV AMES_6708 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMES_6708 SM01232 AMES_6708 AMES_6711 SM00849 Metallo-beta-lactamase superfamily AMES_6718 SM00507 HNH nucleases AMES_6721 SM00642 Alpha-amylase domain AMES_6727 SM00382 ATPases associated with a variety of cellular activities AMES_6730 SM00855 Phosphoglycerate mutase family AMES_6757 SM00903 Flavin reductase like domain AMES_6759 SM00822 AMES_6759 AMES_6759 SM00825 Beta-ketoacyl synthase AMES_6759 SM00826 AMES_6759 AMES_6759 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMES_6769 SM00342 helix_turn_helix, arabinose operon control protein AMES_6770 SM00862 Transcriptional regulatory protein, C terminal AMES_6770 SM01043 Bacterial transcriptional activator domain AMES_6778 SM00421 helix_turn_helix, Lux Regulon AMES_6778 SM00448 cheY-homologous receiver domain AMES_6779 SM00342 helix_turn_helix, arabinose operon control protein AMES_6780 SM00421 helix_turn_helix, Lux Regulon AMES_6780 SM00448 cheY-homologous receiver domain AMES_6795 SM00822 AMES_6795 AMES_6798 SM00729 Elongator protein 3, MiaB family, Radical SAM AMES_6805 SM00710 Parallel beta-helix repeats AMES_6806 SM00231 Coagulation factor 5/8 C-terminal domain, discoidin domain AMES_6806 SM00710 Parallel beta-helix repeats AMES_6807 SM00448 cheY-homologous receiver domain AMES_6807 SM00862 Transcriptional regulatory protein, C terminal AMES_6808 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_6808 SM00387 Histidine kinase-like ATPases AMES_6808 SM00388 His Kinase A (phosphoacceptor) domain AMES_6810 SM00354 helix_turn _helix lactose operon repressor AMES_6814 SM00642 Alpha-amylase domain AMES_6815 SM00382 ATPases associated with a variety of cellular activities AMES_6828 SM00563 Phosphate acyltransferases AMES_6830 SM00354 helix_turn _helix lactose operon repressor AMES_6833 SM00346 helix_turn_helix isocitrate lyase regulation AMES_6834 SM00448 cheY-homologous receiver domain AMES_6834 SM00862 Transcriptional regulatory protein, C terminal AMES_6835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_6835 SM00387 Histidine kinase-like ATPases AMES_6835 SM00388 His Kinase A (phosphoacceptor) domain AMES_6853 SM00849 Metallo-beta-lactamase superfamily AMES_6856 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMES_6862 SM00822 AMES_6862 AMES_6869 SM00855 Phosphoglycerate mutase family AMES_6871 SM00822 AMES_6871 AMES_6873 SM00421 helix_turn_helix, Lux Regulon AMES_6876 SM00482 DNA polymerase A domain AMES_6878 SM00382 ATPases associated with a variety of cellular activities AMES_6878 SM00487 DEAD-like helicases superfamily AMES_6878 SM00490 helicase superfamily c-terminal domain AMES_6878 SM00847 Helicase associated domain (HA2) Add an annotation AMES_6885 SM00481 DNA polymerase alpha chain like domain AMES_6887 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_6887 SM00895 AMES_6887 AMES_6892 SM00267 diguanylate cyclase AMES_6901 SM00316 Ribosomal protein S1-like RNA-binding domain AMES_6904 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_6906 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMES_6906 SM01232 AMES_6906 AMES_6916 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_6916 SM00387 Histidine kinase-like ATPases AMES_6917 SM00421 helix_turn_helix, Lux Regulon AMES_6917 SM00448 cheY-homologous receiver domain AMES_6918 SM00481 DNA polymerase alpha chain like domain AMES_6919 SM00382 ATPases associated with a variety of cellular activities AMES_6920 SM00382 ATPases associated with a variety of cellular activities AMES_6946 SM00327 von Willebrand factor (vWF) type A domain AMES_6946 SM00382 ATPases associated with a variety of cellular activities AMES_6957 SM00382 ATPases associated with a variety of cellular activities AMES_6960 SM00530 Helix-turn-helix XRE-family like proteins AMES_6962 SM00495 Chitin-binding domain type 3 AMES_6974 SM00479 AMES_6974 AMES_6981 SM00257 Lysin motif AMES_6981 SM01043 Bacterial transcriptional activator domain AMES_7003 SM00530 Helix-turn-helix XRE-family like proteins AMES_7005 SM00530 Helix-turn-helix XRE-family like proteins AMES_7013 SM00829 Enoylreductase AMES_7014 SM00861 Transketolase, pyrimidine binding domain AMES_7021 SM00903 Flavin reductase like domain AMES_7024 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_7024 SM00895 AMES_7024 AMES_7035 SM00822 AMES_7035 AMES_7040 SM00829 Enoylreductase AMES_7045 SM00382 ATPases associated with a variety of cellular activities AMES_7046 SM00382 ATPases associated with a variety of cellular activities AMES_7052 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_7052 SM00895 AMES_7052 AMES_7055 SM00829 Enoylreductase AMES_7063 SM00822 AMES_7063 AMES_7074 SM00346 helix_turn_helix isocitrate lyase regulation AMES_7078 SM00903 Flavin reductase like domain AMES_7085 SM00822 AMES_7085 AMES_7100 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMES_7105 SM00822 AMES_7105 AMES_7122 SM00829 Enoylreductase AMES_7125 SM00421 helix_turn_helix, Lux Regulon AMES_7125 SM00448 cheY-homologous receiver domain AMES_7129 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_7136 SM01007 Class II Aldolase and Adducin N-terminal domain AMES_7138 SM00849 Metallo-beta-lactamase superfamily AMES_7146 SM00354 helix_turn _helix lactose operon repressor AMES_7152 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_7152 SM00895 AMES_7152 AMES_7157 SM01217 AMES_7157 AMES_7166 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_7166 SM00866 AMES_7166 AMES_7180 SM00470 ParB-like nuclease domain AMES_7212 SM00530 Helix-turn-helix XRE-family like proteins AMES_7219 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_7226 SM00822 AMES_7226 AMES_7227 SM00342 helix_turn_helix, arabinose operon control protein AMES_7237 SM00364 Leucine-rich repeats, bacterial type AMES_7237 SM00369 Leucine-rich repeats, typical (most populated) subfamily AMES_7238 SM00306 Hint (Hedgehog/Intein) domain N-terminal region AMES_7239 SM00560 LamG-like jellyroll fold domain AMES_7244 SM00342 helix_turn_helix, arabinose operon control protein AMES_7253 SM00382 ATPases associated with a variety of cellular activities AMES_7268 SM01217 AMES_7268 AMES_7273 SM00382 ATPases associated with a variety of cellular activities AMES_7274 SM00060 Fibronectin type 3 domain AMES_7274 SM00637 AMES_7274 AMES_7275 SM00458 Ricin-type beta-trefoil AMES_7278 SM01012 AMES_7278 AMES_7302 SM00060 Fibronectin type 3 domain AMES_7302 SM00637 AMES_7302 AMES_7304 SM00354 helix_turn _helix lactose operon repressor AMES_7316 SM00331 Sigma factor PP2C-like phosphatases AMES_7318 SM01130 AMES_7318 AMES_7332 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_7334 SM00060 Fibronectin type 3 domain AMES_7335 SM00481 DNA polymerase alpha chain like domain AMES_7344 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_7345 SM00382 ATPases associated with a variety of cellular activities AMES_7357 SM00960 Roadblock/LC7 domain AMES_7358 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_7358 SM00387 Histidine kinase-like ATPases AMES_7359 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_7365 SM00421 helix_turn_helix, Lux Regulon AMES_7369 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMES_7369 SM01012 AMES_7369 AMES_7371 SM00458 Ricin-type beta-trefoil AMES_7373 SM00813 Alpha-L-arabinofuranosidase C-terminus AMES_7377 SM00354 helix_turn _helix lactose operon repressor AMES_7382 SM00829 Enoylreductase AMES_7385 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AMES_7396 SM00363 S4 RNA-binding domain AMES_7402 SM00052 Putative diguanylate phosphodiesterase AMES_7402 SM00267 diguanylate cyclase AMES_7407 SM00636 AMES_7407 AMES_7415 SM00530 Helix-turn-helix XRE-family like proteins AMES_7427 SM00327 von Willebrand factor (vWF) type A domain AMES_7429 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_7433 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_7435 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMES_7443 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_7443 SM00895 AMES_7443 AMES_7458 SM00861 Transketolase, pyrimidine binding domain AMES_7460 SM00344 helix_turn_helix ASNC type AMES_7465 SM00448 cheY-homologous receiver domain AMES_7465 SM00862 Transcriptional regulatory protein, C terminal AMES_7467 SM00387 Histidine kinase-like ATPases AMES_7467 SM00388 His Kinase A (phosphoacceptor) domain AMES_7468 SM00346 helix_turn_helix isocitrate lyase regulation AMES_7469 SM00060 Fibronectin type 3 domain AMES_7469 SM00636 AMES_7469 AMES_7470 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_7475 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_7481 SM00448 cheY-homologous receiver domain AMES_7482 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_7482 SM00387 Histidine kinase-like ATPases AMES_7482 SM00388 His Kinase A (phosphoacceptor) domain AMES_7483 SM00331 Sigma factor PP2C-like phosphatases AMES_7483 SM00448 cheY-homologous receiver domain AMES_7495 SM00822 AMES_7495 AMES_7508 SM00382 ATPases associated with a variety of cellular activities AMES_7511 SM00028 Tetratricopeptide repeats AMES_7528 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMES_7535 SM00342 helix_turn_helix, arabinose operon control protein AMES_7543 SM00507 HNH nucleases AMES_7556 SM00506 Appr-1"-p processing enzyme AMES_7562 SM00960 Roadblock/LC7 domain AMES_7563 SM00387 Histidine kinase-like ATPases AMES_7569 SM00267 diguanylate cyclase AMES_7578 SM00342 helix_turn_helix, arabinose operon control protein AMES_7580 SM00342 helix_turn_helix, arabinose operon control protein AMES_7588 SM00849 Metallo-beta-lactamase superfamily AMES_7596 SM00232 JAB/MPN domain AMES_7606 SM00487 DEAD-like helicases superfamily AMES_7606 SM00491 AMES_7606 AMES_7620 SM00834 Putative regulatory protein AMES_7622 SM00344 helix_turn_helix ASNC type AMES_7624 SM00344 helix_turn_helix ASNC type AMES_7630 SM01120 AMES_7630 AMES_7642 SM00342 helix_turn_helix, arabinose operon control protein AMES_7658 SM00382 ATPases associated with a variety of cellular activities AMES_7673 SM00937 AMES_7673 AMES_7675 SM00357 Cold shock protein domain AMES_7675 SM00382 ATPases associated with a variety of cellular activities AMES_7675 SM00959 Rho termination factor, N-terminal domain AMES_7680 SM00836 DALR anticodon binding domain AMES_7680 SM01016 Arginyl tRNA synthetase N terminal dom AMES_7685 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_7687 SM00822 AMES_7687 AMES_7689 SM00829 Enoylreductase AMES_7692 SM00342 helix_turn_helix, arabinose operon control protein AMES_7702 SM00028 Tetratricopeptide repeats AMES_7702 SM00862 Transcriptional regulatory protein, C terminal AMES_7702 SM01043 Bacterial transcriptional activator domain AMES_7705 SM00710 Parallel beta-helix repeats AMES_7706 SM00060 Fibronectin type 3 domain AMES_7706 SM00458 Ricin-type beta-trefoil AMES_7707 SM00458 Ricin-type beta-trefoil AMES_7708 SM00458 Ricin-type beta-trefoil AMES_7709 SM00060 Fibronectin type 3 domain AMES_7709 SM00637 AMES_7709 AMES_7712 SM00458 Ricin-type beta-trefoil AMES_7713 SM00458 Ricin-type beta-trefoil AMES_7714 SM00710 Parallel beta-helix repeats AMES_7716 SM00637 AMES_7716 AMES_7717 SM00422 helix_turn_helix, mercury resistance AMES_7731 SM00346 helix_turn_helix isocitrate lyase regulation AMES_7737 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_7737 SM00419 helix_turn_helix, cAMP Regulatory protein AMES_7738 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_7738 SM00895 AMES_7738 AMES_7756 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_7756 SM00895 AMES_7756 AMES_7758 SM01329 AMES_7758 AMES_7764 SM00960 Roadblock/LC7 domain AMES_7772 SM00421 helix_turn_helix, Lux Regulon AMES_7772 SM00448 cheY-homologous receiver domain AMES_7780 SM00382 ATPases associated with a variety of cellular activities AMES_7796 SM00822 AMES_7796 AMES_7803 SM00878 Biotin carboxylase C-terminal domain AMES_7820 SM00829 Enoylreductase AMES_7821 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMES_7821 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMES_7823 SM00387 Histidine kinase-like ATPases AMES_7824 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_7825 SM00448 cheY-homologous receiver domain AMES_7825 SM00862 Transcriptional regulatory protein, C terminal AMES_7826 SM00382 ATPases associated with a variety of cellular activities AMES_7828 SM00382 ATPases associated with a variety of cellular activities AMES_7831 SM00861 Transketolase, pyrimidine binding domain AMES_7841 SM00382 ATPases associated with a variety of cellular activities AMES_7843 SM00919 Malic enzyme, NAD binding domain AMES_7843 SM01274 AMES_7843 AMES_7846 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_7849 SM00855 Phosphoglycerate mutase family AMES_7852 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMES_7854 SM00387 Histidine kinase-like ATPases AMES_7865 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMES_7869 SM00957 SecA DEAD-like domain AMES_7869 SM00958 SecA preprotein cross-linking domain AMES_7872 SM00909 Sporulation and spore germination AMES_7873 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_7873 SM00387 Histidine kinase-like ATPases AMES_7873 SM00388 His Kinase A (phosphoacceptor) domain AMES_7874 SM00448 cheY-homologous receiver domain AMES_7874 SM00862 Transcriptional regulatory protein, C terminal AMES_7877 SM00346 helix_turn_helix isocitrate lyase regulation AMES_7887 SM00996 S-adenosyl-L-homocysteine hydrolase AMES_7887 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMES_7892 SM00862 Transcriptional regulatory protein, C terminal AMES_7892 SM01043 Bacterial transcriptional activator domain AMES_7905 SM00382 ATPases associated with a variety of cellular activities AMES_7911 SM00838 Elongation factor G C-terminus AMES_7915 SM00387 Histidine kinase-like ATPases AMES_7915 SM00388 His Kinase A (phosphoacceptor) domain AMES_7916 SM00448 cheY-homologous receiver domain AMES_7916 SM00862 Transcriptional regulatory protein, C terminal AMES_7918 SM00382 ATPases associated with a variety of cellular activities AMES_7920 SM00382 ATPases associated with a variety of cellular activities AMES_7929 SM00342 helix_turn_helix, arabinose operon control protein AMES_7929 SM01009 AlkA N-terminal domain AMES_7939 SM00020 Trypsin-like serine protease AMES_7942 SM00530 Helix-turn-helix XRE-family like proteins AMES_7946 SM00849 Metallo-beta-lactamase superfamily AMES_7950 SM01240 AMES_7950 AMES_7952 SM00670 Large family of predicted nucleotide-binding domains AMES_7971 SM00849 Metallo-beta-lactamase superfamily AMES_7972 SM00344 helix_turn_helix ASNC type AMES_7985 SM00116 Domain in cystathionine beta-synthase and other proteins. AMES_7991 SM00822 AMES_7991 AMES_7993 SM00421 helix_turn_helix, Lux Regulon AMES_7996 SM00862 Transcriptional regulatory protein, C terminal AMES_7996 SM01043 Bacterial transcriptional activator domain AMES_7998 SM00421 helix_turn_helix, Lux Regulon AMES_7998 SM00862 Transcriptional regulatory protein, C terminal AMES_7998 SM01043 Bacterial transcriptional activator domain AMES_8002 SM00421 helix_turn_helix, Lux Regulon AMES_8007 SM00344 helix_turn_helix ASNC type AMES_8009 SM00495 Chitin-binding domain type 3 AMES_8010 SM00824 Thioesterase AMES_8011 SM00495 Chitin-binding domain type 3 AMES_8012 SM00342 helix_turn_helix, arabinose operon control protein AMES_8015 SM00637 AMES_8015 AMES_8016 SM00889 Elongation factor G, domain IV AMES_8018 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_8018 SM00387 Histidine kinase-like ATPases AMES_8018 SM00388 His Kinase A (phosphoacceptor) domain AMES_8019 SM01192 AMES_8019 AMES_8019 SM01193 AMES_8019 AMES_8021 SM00382 ATPases associated with a variety of cellular activities AMES_8024 SM00028 Tetratricopeptide repeats AMES_8026 SM00862 Transcriptional regulatory protein, C terminal AMES_8026 SM01043 Bacterial transcriptional activator domain AMES_8030 SM00382 ATPases associated with a variety of cellular activities AMES_8030 SM00421 helix_turn_helix, Lux Regulon AMES_8035 SM00382 ATPases associated with a variety of cellular activities AMES_8041 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_8060 SM00986 Uracil DNA glycosylase superfamily AMES_8060 SM00987 UreE urease accessory protein, C-terminal domain AMES_8064 SM00382 ATPases associated with a variety of cellular activities AMES_8065 SM00382 ATPases associated with a variety of cellular activities AMES_8073 SM01192 AMES_8073 AMES_8073 SM01193 AMES_8073 AMES_8075 SM00028 Tetratricopeptide repeats AMES_8085 SM00382 ATPases associated with a variety of cellular activities AMES_8092 SM00487 DEAD-like helicases superfamily AMES_8092 SM00490 helicase superfamily c-terminal domain AMES_8092 SM00982 AMES_8092 AMES_8092 SM01058 CarD-like/TRCF domain AMES_8095 SM00530 Helix-turn-helix XRE-family like proteins AMES_8097 SM00387 Histidine kinase-like ATPases AMES_8098 SM00421 helix_turn_helix, Lux Regulon AMES_8098 SM00448 cheY-homologous receiver domain AMES_8106 SM00267 diguanylate cyclase AMES_8108 SM01400 AMES_8108 AMES_8117 SM00382 ATPases associated with a variety of cellular activities AMES_8118 SM01022 AMES_8118 AMES_8120 SM00382 ATPases associated with a variety of cellular activities AMES_8121 SM00650 Ribosomal RNA adenine dimethylases AMES_8122 SM01208 AMES_8122 AMES_8126 SM00382 ATPases associated with a variety of cellular activities AMES_8129 SM00829 Enoylreductase AMES_8134 SM00342 helix_turn_helix, arabinose operon control protein AMES_8135 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_8148 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_8151 SM00052 Putative diguanylate phosphodiesterase AMES_8151 SM00091 PAS domain AMES_8151 SM00267 diguanylate cyclase AMES_8159 SM00448 cheY-homologous receiver domain AMES_8159 SM00862 Transcriptional regulatory protein, C terminal AMES_8161 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_8161 SM00387 Histidine kinase-like ATPases AMES_8161 SM00388 His Kinase A (phosphoacceptor) domain AMES_8167 SM00823 Phosphopantetheine attachment site AMES_8167 SM01294 AMES_8167 AMES_8168 SM00823 Phosphopantetheine attachment site AMES_8169 SM00824 Thioesterase AMES_8172 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_8176 SM00382 ATPases associated with a variety of cellular activities AMES_8179 SM00487 DEAD-like helicases superfamily AMES_8179 SM00490 helicase superfamily c-terminal domain AMES_8182 SM00852 Probable molybdopterin binding domain AMES_8185 SM00834 Putative regulatory protein AMES_8186 SM00858 AMES_8186 AMES_8189 SM00852 Probable molybdopterin binding domain AMES_8193 SM00387 Histidine kinase-like ATPases AMES_8193 SM00388 His Kinase A (phosphoacceptor) domain AMES_8194 SM00448 cheY-homologous receiver domain AMES_8194 SM00862 Transcriptional regulatory protein, C terminal AMES_8201 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMES_8203 SM00420 helix_turn_helix, Deoxyribose operon repressor AMES_8203 SM01134 AMES_8203 AMES_8204 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_8204 SM00387 Histidine kinase-like ATPases AMES_8204 SM00388 His Kinase A (phosphoacceptor) domain AMES_8205 SM00448 cheY-homologous receiver domain AMES_8205 SM00862 Transcriptional regulatory protein, C terminal AMES_8207 SM00421 helix_turn_helix, Lux Regulon AMES_8207 SM00448 cheY-homologous receiver domain AMES_8212 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_8215 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_8231 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_8241 SM00382 ATPases associated with a variety of cellular activities AMES_8244 SM00382 ATPases associated with a variety of cellular activities AMES_8248 SM00458 Ricin-type beta-trefoil AMES_8249 SM00458 Ricin-type beta-trefoil AMES_8250 SM00458 Ricin-type beta-trefoil AMES_8251 SM00458 Ricin-type beta-trefoil AMES_8252 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_8252 SM00895 AMES_8252 AMES_8256 SM00796 Allophanate hydrolase subunit 1 AMES_8257 SM00797 Allophanate hydrolase subunit 2 AMES_8261 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_8262 SM00829 Enoylreductase AMES_8265 SM00529 Helix-turn-helix diphteria tox regulatory element AMES_8265 SM00899 AMES_8265 AMES_8291 SM00530 Helix-turn-helix XRE-family like proteins AMES_8293 SM00382 ATPases associated with a variety of cellular activities AMES_8306 SM00944 Pro-kumamolisin, activation domain AMES_8308 SM00849 Metallo-beta-lactamase superfamily AMES_8309 SM00849 Metallo-beta-lactamase superfamily AMES_8325 SM00382 ATPases associated with a variety of cellular activities AMES_8327 SM00387 Histidine kinase-like ATPases AMES_8328 SM00421 helix_turn_helix, Lux Regulon AMES_8328 SM00448 cheY-homologous receiver domain AMES_8335 SM00382 ATPases associated with a variety of cellular activities AMES_8338 SM00448 cheY-homologous receiver domain AMES_8338 SM00862 Transcriptional regulatory protein, C terminal AMES_8339 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_8339 SM00387 Histidine kinase-like ATPases AMES_8339 SM00388 His Kinase A (phosphoacceptor) domain AMES_8351 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_8359 SM00357 Cold shock protein domain AMES_8369 SM00382 ATPases associated with a variety of cellular activities AMES_8382 SM00382 ATPases associated with a variety of cellular activities AMES_8386 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_8387 SM00729 Elongator protein 3, MiaB family, Radical SAM AMES_8389 SM00257 Lysin motif AMES_8391 SM00852 Probable molybdopterin binding domain AMES_8393 SM00919 Malic enzyme, NAD binding domain AMES_8393 SM01274 AMES_8393 AMES_8398 SM00960 Roadblock/LC7 domain AMES_8401 SM00960 Roadblock/LC7 domain AMES_8402 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_8402 SM00387 Histidine kinase-like ATPases AMES_8403 SM00062 Bacterial periplasmic substrate-binding proteins AMES_8406 SM00382 ATPases associated with a variety of cellular activities AMES_8409 SM00944 Pro-kumamolisin, activation domain AMES_8413 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_8413 SM00387 Histidine kinase-like ATPases AMES_8416 SM00487 DEAD-like helicases superfamily AMES_8416 SM00490 helicase superfamily c-terminal domain AMES_8420 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_8424 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_8425 SM00357 Cold shock protein domain AMES_8429 SM00852 Probable molybdopterin binding domain AMES_8430 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_8434 SM00382 ATPases associated with a variety of cellular activities AMES_8434 SM01072 Cell division protein 48 (CDC48) domain 2 AMES_8434 SM01073 Cell division protein 48 (CDC48) N-terminal domain AMES_8439 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMES_8444 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_8452 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_8452 SM00866 AMES_8452 AMES_8462 SM00862 Transcriptional regulatory protein, C terminal AMES_8462 SM01043 Bacterial transcriptional activator domain AMES_8468 SM00829 Enoylreductase AMES_8475 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_8483 SM01217 AMES_8483 AMES_8488 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_8490 SM00382 ATPases associated with a variety of cellular activities AMES_8496 SM00881 CoA binding domain AMES_8504 SM00448 cheY-homologous receiver domain AMES_8504 SM00862 Transcriptional regulatory protein, C terminal AMES_8505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_8505 SM00387 Histidine kinase-like ATPases AMES_8505 SM00388 His Kinase A (phosphoacceptor) domain AMES_8508 SM00829 Enoylreductase AMES_8510 SM00346 helix_turn_helix isocitrate lyase regulation AMES_8513 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMES_8518 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_8518 SM00387 Histidine kinase-like ATPases AMES_8518 SM00388 His Kinase A (phosphoacceptor) domain AMES_8521 SM00028 Tetratricopeptide repeats AMES_8529 SM00812 Alpha-L-fucosidase AMES_8535 SM00422 helix_turn_helix, mercury resistance AMES_8541 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_8545 SM00382 ATPases associated with a variety of cellular activities AMES_8547 SM01058 CarD-like/TRCF domain AMES_8553 SM00840 AMES_8553 AMES_8554 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMES_8557 SM00460 Transglutaminase/protease-like homologues AMES_8560 SM01007 Class II Aldolase and Adducin N-terminal domain AMES_8566 SM00382 ATPases associated with a variety of cellular activities AMES_8568 SM00354 helix_turn _helix lactose operon repressor AMES_8569 SM00947 Carbonic anhydrase AMES_8571 SM00478 endonuclease III AMES_8574 SM00382 ATPases associated with a variety of cellular activities AMES_8588 SM00382 ATPases associated with a variety of cellular activities AMES_8590 SM00862 Transcriptional regulatory protein, C terminal AMES_8590 SM01043 Bacterial transcriptional activator domain AMES_8595 SM00530 Helix-turn-helix XRE-family like proteins AMES_8596 SM00382 ATPases associated with a variety of cellular activities AMES_8596 SM01086 C-terminal, D2-small domain, of ClpB protein AMES_8599 SM00342 helix_turn_helix, arabinose operon control protein AMES_8610 SM00422 helix_turn_helix, mercury resistance AMES_8612 SM00905 Dihydroneopterin aldolase AMES_8615 SM00382 ATPases associated with a variety of cellular activities AMES_8627 SM00649 Ribosomal protein L11/L12 AMES_8629 SM00631 AMES_8629 AMES_8635 SM00530 Helix-turn-helix XRE-family like proteins AMES_8643 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_8654 SM00382 ATPases associated with a variety of cellular activities AMES_8661 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMES_8661 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMES_8661 SM00493 AMES_8661 AMES_8666 SM00487 DEAD-like helicases superfamily AMES_8666 SM00490 helicase superfamily c-terminal domain AMES_8667 SM00943 Bifunctional DNA primase/polymerase, N-terminal AMES_8694 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_8697 SM00478 endonuclease III AMES_8697 SM00525 AMES_8697 AMES_8699 SM00100 Cyclic nucleotide-monophosphate binding domain AMES_8699 SM00419 helix_turn_helix, cAMP Regulatory protein AMES_8702 SM00480 DNA polymerase III beta subunit AMES_8708 SM00849 Metallo-beta-lactamase superfamily AMES_8719 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_8747 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMES_8751 SM00917 LeuA allosteric (dimerisation) domain AMES_8763 SM00382 ATPases associated with a variety of cellular activities AMES_8764 SM00382 ATPases associated with a variety of cellular activities AMES_8775 SM00493 AMES_8775 AMES_8776 SM00047 Lysozyme subfamily 2 AMES_8779 SM00646 AMES_8779 AMES_8783 SM00382 ATPases associated with a variety of cellular activities AMES_8788 SM00960 Roadblock/LC7 domain AMES_8789 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_8789 SM00387 Histidine kinase-like ATPases AMES_8790 SM00382 ATPases associated with a variety of cellular activities AMES_8794 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMES_8794 SM00387 Histidine kinase-like ATPases AMES_8794 SM00388 His Kinase A (phosphoacceptor) domain AMES_8795 SM00448 cheY-homologous receiver domain AMES_8795 SM00862 Transcriptional regulatory protein, C terminal AMES_8798 SM00421 helix_turn_helix, Lux Regulon AMES_8798 SM00448 cheY-homologous receiver domain AMES_8803 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AMES_8805 SM00220 Serine/Threonine protein kinases, catalytic domain AMES_8808 SM00331 Sigma factor PP2C-like phosphatases AMES_8808 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMES_8818 SM00854 Bacterial capsule synthesis protein PGA_cap AMES_8833 SM00422 helix_turn_helix, mercury resistance AMES_8836 SM00382 ATPases associated with a variety of cellular activities AMES_8838 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_8838 SM00895 AMES_8838 AMES_8839 SM01130 AMES_8839 AMES_8843 SM00344 helix_turn_helix ASNC type AMES_8854 SM00458 Ricin-type beta-trefoil AMES_8856 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_8856 SM00866 AMES_8856 AMES_8863 SM00267 diguanylate cyclase AMES_8867 SM00382 ATPases associated with a variety of cellular activities AMES_8872 SM00862 Transcriptional regulatory protein, C terminal AMES_8876 SM00450 Rhodanese Homology Domain AMES_8879 SM00796 Allophanate hydrolase subunit 1 AMES_8880 SM00797 Allophanate hydrolase subunit 2 AMES_8890 SM00382 ATPases associated with a variety of cellular activities AMES_8905 SM00641 Glycosyl hydrolases family 25 AMES_8906 SM00641 Glycosyl hydrolases family 25 AMES_8912 SM00382 ATPases associated with a variety of cellular activities AMES_8913 SM01211 AMES_8913 AMES_8918 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMES_8921 SM00849 Metallo-beta-lactamase superfamily AMES_8925 SM00382 ATPases associated with a variety of cellular activities AMES_8927 SM00062 Bacterial periplasmic substrate-binding proteins AMES_8927 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMES_8928 SM00062 Bacterial periplasmic substrate-binding proteins AMES_8929 SM00062 Bacterial periplasmic substrate-binding proteins AMES_8930 SM00998 Adenylosuccinate lyase C-terminus AMES_8931 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMES_8932 SM00822 AMES_8932 AMES_8935 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMES_8935 SM00895 AMES_8935 AMES_8949 SM01209 AMES_8949 AMES_8949 SM01210 AMES_8949 AMES_8961 SM00788 Adenylosuccinate synthetase AMES_8968 SM00267 diguanylate cyclase AMES_8976 SM00822 AMES_8976 AMES_8990 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_8992 SM00867 YceI-like domain AMES_8999 SM00382 ATPases associated with a variety of cellular activities AMES_9002 SM00354 helix_turn _helix lactose operon repressor AMES_9005 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMES_9014 SM00382 ATPases associated with a variety of cellular activities AMES_9018 SM00382 ATPases associated with a variety of cellular activities AMES_9018 SM01086 C-terminal, D2-small domain, of ClpB protein AMES_9020 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_9024 SM00495 Chitin-binding domain type 3 AMES_9026 SM00422 helix_turn_helix, mercury resistance AMES_9027 SM00271 DnaJ molecular chaperone homology domain AMES_9032 SM00530 Helix-turn-helix XRE-family like proteins AMES_9041 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_9057 SM00986 Uracil DNA glycosylase superfamily AMES_9057 SM00987 UreE urease accessory protein, C-terminal domain AMES_9058 SM00421 helix_turn_helix, Lux Regulon AMES_9062 SM00530 Helix-turn-helix XRE-family like proteins AMES_9063 SM00364 Leucine-rich repeats, bacterial type AMES_9063 SM00369 Leucine-rich repeats, typical (most populated) subfamily AMES_9065 SM00883 Chaperonin 10 Kd subunit AMES_9070 SM00382 ATPases associated with a variety of cellular activities AMES_9072 SM00062 Bacterial periplasmic substrate-binding proteins AMES_9076 SM00460 Transglutaminase/protease-like homologues AMES_9080 SM00861 Transketolase, pyrimidine binding domain AMES_9084 SM00382 ATPases associated with a variety of cellular activities AMES_9088 SM00487 DEAD-like helicases superfamily AMES_9096 SM00822 AMES_9096 AMES_9099 SM00422 helix_turn_helix, mercury resistance AMES_9103 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_9108 SM00530 Helix-turn-helix XRE-family like proteins AMES_9112 SM00382 ATPases associated with a variety of cellular activities AMES_9122 SM00421 helix_turn_helix, Lux Regulon AMES_9122 SM00448 cheY-homologous receiver domain AMES_9125 SM00382 ATPases associated with a variety of cellular activities AMES_9127 SM00382 ATPases associated with a variety of cellular activities AMES_9132 SM00382 ATPases associated with a variety of cellular activities AMES_9135 SM00421 helix_turn_helix, Lux Regulon AMES_9135 SM00448 cheY-homologous receiver domain AMES_9137 SM00822 AMES_9137 AMES_9142 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_9154 SM00518 AP endonuclease family 2 AMES_9166 SM00347 helix_turn_helix multiple antibiotic resistance protein AMES_9167 SM00382 ATPases associated with a variety of cellular activities AMES_9173 SM00421 helix_turn_helix, Lux Regulon AMES_9173 SM00448 cheY-homologous receiver domain AMES_9189 SM00822 AMES_9189 AMES_9199 SM00954 Region found in RelA / SpoT proteins AMES_9207 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMES_9216 SM00646 AMES_9216 AMES_9220 SM00470 ParB-like nuclease domain AMES_9224 SM00393 Putative single-stranded nucleic acids-binding domain AMES_9226 SM01234 AMES_9226