locus-tag class description YIM_00005 PF00308 Bacterial dnaA protein YIM_00005 PF08299 Bacterial dnaA protein helix-turn-helix YIM_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain YIM_00015 PF02767 DNA polymerase III beta subunit, central domain YIM_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain YIM_00020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_00020 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YIM_00025 PF02463 RecF/RecN/SMC N terminal domain YIM_00030 PF05258 Dna[CI] antecedent, DciA YIM_00035 PF00204 DNA gyrase B YIM_00035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_00035 PF01751 Toprim domain YIM_00035 PF00986 DNA gyrase B subunit, carboxyl terminus YIM_00040 PF03989 DNA gyrase C-terminal domain, beta-propeller YIM_00040 PF00521 DNA gyrase/topoisomerase IV, subunit A YIM_00045 PF12089 Transmembrane domain of unknown function (DUF3566) YIM_00090 PF00291 Pyridoxal-phosphate dependent enzyme YIM_00125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YIM_00135 PF10756 Bacterial PH domain YIM_00140 PF06781 Cell division protein CrgA YIM_00145 PF04203 Sortase domain YIM_00155 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_00160 PF00117 Glutamine amidotransferase class-I YIM_00170 PF03795 YCII-related domain YIM_00175 PF00069 Protein kinase domain YIM_00175 PF03793 PASTA domain YIM_00180 PF00069 Protein kinase domain YIM_00185 PF00905 Penicillin binding protein transpeptidase domain YIM_00190 PF01098 Cell cycle protein YIM_00200 PF16697 Inner membrane component of T3SS, cytoplasmic domain YIM_00205 PF12401 Protein of unknown function (DUF2662) YIM_00205 PF00498 FHA domain YIM_00230 PF14032 PknH-like extracellular domain YIM_00230 PF00069 Protein kinase domain YIM_00245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YIM_00255 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_00260 PF01053 Cys/Met metabolism PLP-dependent enzyme YIM_00275 PF00392 Bacterial regulatory proteins, gntR family YIM_00275 PF07729 FCD domain YIM_00280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_00285 PF00528 Binding-protein-dependent transport system inner membrane component YIM_00295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_00295 PF00005 ABC transporter YIM_00300 PF00005 ABC transporter YIM_00300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_00305 PF00171 Aldehyde dehydrogenase family YIM_00315 PF01425 Amidase YIM_00325 PF12897 Alanine-glyoxylate amino-transferase YIM_00340 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_00345 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_00350 PF00069 Protein kinase domain YIM_00355 PF00069 Protein kinase domain YIM_00355 PF14032 PknH-like extracellular domain YIM_00360 PF14032 PknH-like extracellular domain YIM_00360 PF00069 Protein kinase domain YIM_00370 PF13460 NAD(P)H-binding YIM_00375 PF01565 FAD binding domain YIM_00375 PF04030 D-arabinono-1,4-lactone oxidase YIM_00390 PF00232 Glycosyl hydrolase family 1 YIM_00395 PF07690 Major Facilitator Superfamily YIM_00445 PF02028 BCCT, betaine/carnitine/choline family transporter YIM_00450 PF00528 Binding-protein-dependent transport system inner membrane component YIM_00455 PF00571 CBS domain YIM_00455 PF00005 ABC transporter YIM_00460 PF00528 Binding-protein-dependent transport system inner membrane component YIM_00465 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YIM_00485 PF00106 short chain dehydrogenase YIM_00490 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YIM_00490 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YIM_00490 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YIM_00495 PF00892 EamA-like transporter family YIM_00535 PF07690 Major Facilitator Superfamily YIM_00545 PF07730 Histidine kinase YIM_00550 PF00196 Bacterial regulatory proteins, luxR family YIM_00550 PF00072 Response regulator receiver domain YIM_00570 PF00534 Glycosyl transferases group 1 YIM_00570 PF13439 Glycosyltransferase Family 4 YIM_00615 PF01625 Peptide methionine sulfoxide reductase YIM_00620 PF02225 PA domain YIM_00620 PF04389 Peptidase family M28 YIM_00640 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YIM_00640 PF18416 N-acetylglucosamine binding protein domain 2 YIM_00660 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YIM_00660 PF06827 Zinc finger found in FPG and IleRS YIM_00665 PF07694 5TMR of 5TMR-LYT YIM_00665 PF06580 Histidine kinase YIM_00670 PF01343 Peptidase family S49 YIM_00670 PF06965 Na+/H+ antiporter 1 YIM_00680 PF00072 Response regulator receiver domain YIM_00680 PF04397 LytTr DNA-binding domain YIM_00690 PF00474 Sodium:solute symporter family YIM_00695 PF04341 Protein of unknown function, DUF485 YIM_00700 PF00474 Sodium:solute symporter family YIM_00725 PF00067 Cytochrome P450 YIM_00730 PF00293 NUDIX domain YIM_00745 PF04545 Sigma-70, region 4 YIM_00745 PF04539 Sigma-70 region 3 YIM_00745 PF04542 Sigma-70 region 2 YIM_00755 PF00210 Ferritin-like domain YIM_00785 PF00712 DNA polymerase III beta subunit, N-terminal domain YIM_00785 PF02767 DNA polymerase III beta subunit, central domain YIM_00785 PF02768 DNA polymerase III beta subunit, C-terminal domain YIM_00840 PF01654 Cytochrome bd terminal oxidase subunit I YIM_00845 PF02322 Cytochrome bd terminal oxidase subunit II YIM_00850 PF00005 ABC transporter YIM_00850 PF00664 ABC transporter transmembrane region YIM_00855 PF13492 GAF domain YIM_00855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_00855 PF07730 Histidine kinase YIM_00855 PF13185 GAF domain YIM_00860 PF00857 Isochorismatase family YIM_00865 PF00072 Response regulator receiver domain YIM_00865 PF00196 Bacterial regulatory proteins, luxR family YIM_00895 PF04434 SWIM zinc finger YIM_00910 PF00485 Phosphoribulokinase / Uridine kinase family YIM_00915 PF01661 Macro domain YIM_00920 PF01842 ACT domain YIM_00920 PF00800 Prephenate dehydratase YIM_00925 PF00300 Histidine phosphatase superfamily (branch 1) YIM_00930 PF03070 TENA/THI-4/PQQC family YIM_00955 PF00106 short chain dehydrogenase YIM_00970 PF13845 Septum formation YIM_00980 PF03738 Glutathionylspermidine synthase preATP-grasp YIM_00985 PF03994 Domain of Unknown Function (DUF350) YIM_00990 PF00561 alpha/beta hydrolase fold YIM_00995 PF02403 Seryl-tRNA synthetase N-terminal domain YIM_00995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YIM_01010 PF01266 FAD dependent oxidoreductase YIM_01025 PF00196 Bacterial regulatory proteins, luxR family YIM_01060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_01065 PF01370 NAD dependent epimerase/dehydratase family YIM_01070 PF13439 Glycosyltransferase Family 4 YIM_01075 PF12464 Maltose acetyltransferase YIM_01075 PF14602 Hexapeptide repeat of succinyl-transferase YIM_01100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_01100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_01105 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_01115 PF13419 Haloacid dehalogenase-like hydrolase YIM_01120 PF00550 Phosphopantetheine attachment site YIM_01130 PF13193 AMP-binding enzyme C-terminal domain YIM_01130 PF00501 AMP-binding enzyme YIM_01165 PF01553 Acyltransferase YIM_01175 PF00296 Luciferase-like monooxygenase YIM_01185 PF03275 UDP-galactopyranose mutase YIM_01190 PF01569 PAP2 superfamily YIM_01195 PF01040 UbiA prenyltransferase family YIM_01225 PF00106 short chain dehydrogenase YIM_01230 PF01565 FAD binding domain YIM_01230 PF04030 D-arabinono-1,4-lactone oxidase YIM_01235 PF04138 GtrA-like protein YIM_01240 PF17994 Galactofuranosyltransferase 2 N-terminal YIM_01275 PF00005 ABC transporter YIM_01280 PF01061 ABC-2 type transporter YIM_01290 PF10759 Protein of unknown function (DUF2587) YIM_01295 PF00266 Aminotransferase class-V YIM_01305 PF04389 Peptidase family M28 YIM_01305 PF02225 PA domain YIM_01310 PF04228 Putative neutral zinc metallopeptidase YIM_01360 PF05922 Peptidase inhibitor I9 YIM_01360 PF00082 Subtilase family YIM_01365 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_01365 PF13191 AAA ATPase domain YIM_01370 PF12146 Serine aminopeptidase, S33 YIM_01375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_01375 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_01375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_01385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_01385 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_01385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_01390 PF13460 NAD(P)H-binding YIM_01405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_01405 PF13492 GAF domain YIM_01405 PF07730 Histidine kinase YIM_01410 PF00072 Response regulator receiver domain YIM_01410 PF00196 Bacterial regulatory proteins, luxR family YIM_01415 PF07690 Major Facilitator Superfamily YIM_01425 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YIM_01425 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YIM_01430 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_01430 PF00672 HAMP domain YIM_01440 PF02735 Ku70/Ku80 beta-barrel domain YIM_01445 PF13298 DNA polymerase Ligase (LigD) YIM_01445 PF04679 ATP dependent DNA ligase C terminal region YIM_01445 PF01068 ATP dependent DNA ligase domain YIM_01450 PF04072 Leucine carboxyl methyltransferase YIM_01455 PF04539 Sigma-70 region 3 YIM_01455 PF04545 Sigma-70, region 4 YIM_01455 PF04542 Sigma-70 region 2 YIM_01470 PF00155 Aminotransferase class I and II YIM_01475 PF01738 Dienelactone hydrolase family YIM_01495 PF13193 AMP-binding enzyme C-terminal domain YIM_01495 PF00501 AMP-binding enzyme YIM_01540 PF09015 NgoMIV restriction enzyme YIM_01575 PF07729 FCD domain YIM_01575 PF00392 Bacterial regulatory proteins, gntR family YIM_01600 PF10604 Polyketide cyclase / dehydrase and lipid transport YIM_01605 PF00248 Aldo/keto reductase family YIM_01610 PF09997 Predicted membrane protein (DUF2238) YIM_01645 PF07730 Histidine kinase YIM_01645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_01650 PF00196 Bacterial regulatory proteins, luxR family YIM_01655 PF17674 HHH domain YIM_01655 PF16921 Tex protein YqgF-like domain YIM_01655 PF00575 S1 RNA binding domain YIM_01655 PF09371 Tex-like protein N-terminal domain YIM_01660 PF01272 Transcription elongation factor, GreA/GreB, C-term YIM_01670 PF01799 [2Fe-2S] binding domain YIM_01670 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_01675 PF00034 Cytochrome c YIM_01675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YIM_01675 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_01695 PF00005 ABC transporter YIM_01695 PF13732 Domain of unknown function (DUF4162) YIM_01720 PF02153 Prephenate dehydrogenase YIM_01735 PF14437 MafB19-like deaminase YIM_01740 PF05532 CsbD-like YIM_01750 PF00561 alpha/beta hydrolase fold YIM_01785 PF01580 FtsK/SpoIIIE family YIM_01810 PF00512 His Kinase A (phospho-acceptor) domain YIM_01810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_01810 PF00672 HAMP domain YIM_01815 PF00486 Transcriptional regulatory protein, C terminal YIM_01815 PF00072 Response regulator receiver domain YIM_01830 PF07730 Histidine kinase YIM_01830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_01830 PF13492 GAF domain YIM_01830 PF13185 GAF domain YIM_01835 PF00072 Response regulator receiver domain YIM_01835 PF00196 Bacterial regulatory proteins, luxR family YIM_01840 PF09186 Domain of unknown function (DUF1949) YIM_01840 PF01205 Uncharacterized protein family UPF0029 YIM_01855 PF02861 Clp amino terminal domain, pathogenicity island component YIM_01870 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YIM_01870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_01910 PF00196 Bacterial regulatory proteins, luxR family YIM_01910 PF00072 Response regulator receiver domain YIM_01920 PF00072 Response regulator receiver domain YIM_01920 PF00486 Transcriptional regulatory protein, C terminal YIM_01925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_01925 PF00672 HAMP domain YIM_01925 PF00512 His Kinase A (phospho-acceptor) domain YIM_01930 PF16655 PhoD-like phosphatase, N-terminal domain YIM_01930 PF09423 PhoD-like phosphatase YIM_01940 PF12169 DNA polymerase III subunits gamma and tau domain III YIM_01945 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_01950 PF01638 HxlR-like helix-turn-helix YIM_01955 PF01520 N-acetylmuramoyl-L-alanine amidase YIM_01960 PF02575 YbaB/EbfC DNA-binding family YIM_01965 PF02132 RecR protein YIM_01965 PF13662 Toprim domain YIM_01975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_01990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_01990 PF00005 ABC transporter YIM_01995 PF00005 ABC transporter YIM_01995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_02000 PF13460 NAD(P)H-binding YIM_02005 PF00892 EamA-like transporter family YIM_02010 PF03466 LysR substrate binding domain YIM_02010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_02030 PF00682 HMGL-like YIM_02030 PF08502 LeuA allosteric (dimerisation) domain YIM_02055 PF13840 ACT domain YIM_02055 PF01842 ACT domain YIM_02055 PF00696 Amino acid kinase family YIM_02060 PF01118 Semialdehyde dehydrogenase, NAD binding domain YIM_02060 PF02774 Semialdehyde dehydrogenase, dimerisation domain YIM_02070 PF01139 tRNA-splicing ligase RtcB YIM_02085 PF06628 Catalase-related immune-responsive YIM_02085 PF00199 Catalase YIM_02095 PF07859 alpha/beta hydrolase fold YIM_02100 PF03358 NADPH-dependent FMN reductase YIM_02105 PF02566 OsmC-like protein YIM_02110 PF00210 Ferritin-like domain YIM_02115 PF00326 Prolyl oligopeptidase family YIM_02120 PF01209 ubiE/COQ5 methyltransferase family YIM_02135 PF00149 Calcineurin-like phosphoesterase YIM_02140 PF00912 Transglycosylase YIM_02140 PF00905 Penicillin binding protein transpeptidase domain YIM_02140 PF17092 Penicillin-binding protein OB-like domain YIM_02145 PF02467 Transcription factor WhiB YIM_02150 PF02374 Anion-transporting ATPase YIM_02155 PF02374 Anion-transporting ATPase YIM_02165 PF01674 Lipase (class 2) YIM_02205 PF13545 Crp-like helix-turn-helix domain YIM_02205 PF00027 Cyclic nucleotide-binding domain YIM_02215 PF00633 Helix-hairpin-helix motif YIM_02215 PF00730 HhH-GPD superfamily base excision DNA repair protein YIM_02215 PF10576 Iron-sulfur binding domain of endonuclease III YIM_02220 PF00578 AhpC/TSA family YIM_02230 PF02674 Colicin V production protein YIM_02235 PF00561 alpha/beta hydrolase fold YIM_02245 PF06965 Na+/H+ antiporter 1 YIM_02250 PF00854 POT family YIM_02265 PF00083 Sugar (and other) transporter YIM_02270 PF00392 Bacterial regulatory proteins, gntR family YIM_02270 PF07729 FCD domain YIM_02300 PF00501 AMP-binding enzyme YIM_02300 PF13193 AMP-binding enzyme C-terminal domain YIM_02300 PF16177 Acetyl-coenzyme A synthetase N-terminus YIM_02310 PF00156 Phosphoribosyl transferase domain YIM_02320 PF01380 SIS domain YIM_02325 PF01380 SIS domain YIM_02325 PF01418 Helix-turn-helix domain, rpiR family YIM_02330 PF00144 Beta-lactamase YIM_02335 PF07075 Protein of unknown function (DUF1343) YIM_02340 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_02340 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_02360 PF00437 Type II/IV secretion system protein YIM_02395 PF00270 DEAD/DEAH box helicase YIM_02395 PF00271 Helicase conserved C-terminal domain YIM_02395 PF09369 Domain of unknown function (DUF1998) YIM_02400 PF03030 Inorganic H+ pyrophosphatase YIM_02425 PF13368 Topoisomerase C-terminal repeat YIM_02425 PF01131 DNA topoisomerase YIM_02425 PF01751 Toprim domain YIM_02435 PF02223 Thymidylate kinase YIM_02440 PF12169 DNA polymerase III subunits gamma and tau domain III YIM_02455 PF00589 Phage integrase family YIM_02465 PF12307 Protein of unknown function (DUF3631) YIM_02475 PF09397 Ftsk gamma domain YIM_02475 PF17854 FtsK alpha domain YIM_02475 PF01580 FtsK/SpoIIIE family YIM_02510 PF01230 HIT domain YIM_02525 PF00155 Aminotransferase class I and II YIM_02525 PF00392 Bacterial regulatory proteins, gntR family YIM_02530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_02535 PF00246 Zinc carboxypeptidase YIM_02540 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_02545 PF00298 Ribosomal protein L11, RNA binding domain YIM_02545 PF03946 Ribosomal protein L11, N-terminal domain YIM_02555 PF00464 Serine hydroxymethyltransferase YIM_02565 PF01022 Bacterial regulatory protein, arsR family YIM_02580 PF00719 Inorganic pyrophosphatase YIM_02595 PF01171 PP-loop family YIM_02595 PF09179 TilS substrate binding domain YIM_02625 PF00004 ATPase family associated with various cellular activities (AAA) YIM_02625 PF01434 Peptidase family M41 YIM_02625 PF17862 AAA+ lid domain YIM_02630 PF01227 GTP cyclohydrolase I YIM_02635 PF00809 Pterin binding enzyme YIM_02640 PF02152 Dihydroneopterin aldolase YIM_02645 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YIM_02650 PF13411 MerR HTH family regulatory protein YIM_02675 PF02569 Pantoate-beta-alanine ligase YIM_02680 PF02261 Aspartate decarboxylase YIM_02685 PF01336 OB-fold nucleic acid binding domain YIM_02685 PF00152 tRNA synthetases class II (D, K and N) YIM_02690 PF11774 Lsr2 YIM_02705 PF07724 AAA domain (Cdc48 subfamily) YIM_02705 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_02705 PF02861 Clp amino terminal domain, pathogenicity island component YIM_02705 PF00004 ATPase family associated with various cellular activities (AAA) YIM_02705 PF17871 AAA lid domain YIM_02710 PF00196 Bacterial regulatory proteins, luxR family YIM_02715 PF01061 ABC-2 type transporter YIM_02720 PF13732 Domain of unknown function (DUF4162) YIM_02720 PF00005 ABC transporter YIM_02730 PF02146 Sir2 family YIM_02735 PF03992 Antibiotic biosynthesis monooxygenase YIM_02740 PF01433 Peptidase family M1 domain YIM_02740 PF11838 ERAP1-like C-terminal domain YIM_02745 PF00561 alpha/beta hydrolase fold YIM_02755 PF10576 Iron-sulfur binding domain of endonuclease III YIM_02755 PF00633 Helix-hairpin-helix motif YIM_02755 PF00730 HhH-GPD superfamily base excision DNA repair protein YIM_02765 PF00356 Bacterial regulatory proteins, lacI family YIM_02775 PF00005 ABC transporter YIM_02790 PF04286 Protein of unknown function (DUF445) YIM_02825 PF03062 MBOAT, membrane-bound O-acyltransferase family YIM_02830 PF08032 RNA 2'-O ribose methyltransferase substrate binding YIM_02830 PF00588 SpoU rRNA Methylase family YIM_02845 PF02542 YgbB family YIM_02850 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YIM_02855 PF02559 CarD-like/TRCF domain YIM_02865 PF06745 KaiC YIM_02865 PF18073 Rubredoxin metal binding domain YIM_02900 PF00982 Glycosyltransferase family 20 YIM_02910 PF04107 Glutamate-cysteine ligase family 2(GCS2) YIM_02925 PF00797 N-acetyltransferase YIM_02930 PF02567 Phenazine biosynthesis-like protein YIM_02935 PF03466 LysR substrate binding domain YIM_02935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_02940 PF03551 Transcriptional regulator PadR-like family YIM_02945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YIM_02945 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_02960 PF02311 AraC-like ligand binding domain YIM_02960 PF12833 Helix-turn-helix domain YIM_02965 PF00072 Response regulator receiver domain YIM_02965 PF00196 Bacterial regulatory proteins, luxR family YIM_02985 PF04542 Sigma-70 region 2 YIM_02985 PF08281 Sigma-70, region 4 YIM_02995 PF13380 CoA binding domain YIM_03010 PF00999 Sodium/hydrogen exchanger family YIM_03015 PF18665 Tetracyclin repressor-like, C-terminal domain YIM_03015 PF00440 Bacterial regulatory proteins, tetR family YIM_03030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_03030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_03035 PF00067 Cytochrome P450 YIM_03040 PF01575 MaoC like domain YIM_03040 PF00171 Aldehyde dehydrogenase family YIM_03045 PF05138 Phenylacetic acid catabolic protein YIM_03050 PF06243 Phenylacetic acid degradation B YIM_03055 PF05138 Phenylacetic acid catabolic protein YIM_03060 PF01883 Iron-sulfur cluster assembly protein YIM_03065 PF00175 Oxidoreductase NAD-binding domain YIM_03065 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_03065 PF00970 Oxidoreductase FAD-binding domain YIM_03070 PF07690 Major Facilitator Superfamily YIM_03080 PF00480 ROK family YIM_03085 PF01116 Fructose-bisphosphate aldolase class-II YIM_03090 PF00920 Dehydratase family YIM_03105 PF13732 Domain of unknown function (DUF4162) YIM_03105 PF00005 ABC transporter YIM_03110 PF01061 ABC-2 type transporter YIM_03125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_03130 PF01738 Dienelactone hydrolase family YIM_03140 PF04286 Protein of unknown function (DUF445) YIM_03150 PF00583 Acetyltransferase (GNAT) family YIM_03155 PF00202 Aminotransferase class-III YIM_03160 PF06339 Ectoine synthase YIM_03165 PF05721 Phytanoyl-CoA dioxygenase (PhyH) YIM_03170 PF03704 Bacterial transcriptional activator domain YIM_03170 PF00931 NB-ARC domain YIM_03170 PF00486 Transcriptional regulatory protein, C terminal YIM_03190 PF00691 OmpA family YIM_03190 PF00223 Photosystem I psaA/psaB protein YIM_03210 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ YIM_03220 PF01869 BadF/BadG/BcrA/BcrD ATPase family YIM_03225 PF01380 SIS domain YIM_03230 PF00392 Bacterial regulatory proteins, gntR family YIM_03230 PF07702 UTRA domain YIM_03235 PF07690 Major Facilitator Superfamily YIM_03240 PF00291 Pyridoxal-phosphate dependent enzyme YIM_03250 PF01230 HIT domain YIM_03255 PF02769 AIR synthase related protein, C-terminal domain YIM_03255 PF00586 AIR synthase related protein, N-terminal domain YIM_03275 PF02224 Cytidylate kinase YIM_03280 PF02581 Thiamine monophosphate synthase YIM_03285 PF01266 FAD dependent oxidoreductase YIM_03285 PF05690 Thiazole biosynthesis protein ThiG YIM_03290 PF05690 Thiazole biosynthesis protein ThiG YIM_03290 PF02597 ThiS family YIM_03295 PF05690 Thiazole biosynthesis protein ThiG YIM_03310 PF08543 Phosphomethylpyrimidine kinase YIM_03325 PF08543 Phosphomethylpyrimidine kinase YIM_03330 PF13667 ThiC-associated domain YIM_03330 PF01964 Radical SAM ThiC family YIM_03340 PF00723 Glycosyl hydrolases family 15 YIM_03340 PF09137 Glucodextranase, domain N YIM_03345 PF01327 Polypeptide deformylase YIM_03365 PF01434 Peptidase family M41 YIM_03365 PF17862 AAA+ lid domain YIM_03365 PF00004 ATPase family associated with various cellular activities (AAA) YIM_03370 PF01066 CDP-alcohol phosphatidyltransferase YIM_03375 PF02666 Phosphatidylserine decarboxylase YIM_03380 PF03453 MoeA N-terminal region (domain I and II) YIM_03380 PF03454 MoeA C-terminal region (domain IV) YIM_03380 PF00994 Probable molybdopterin binding domain YIM_03395 PF00313 'Cold-shock' DNA-binding domain YIM_03400 PF00069 Protein kinase domain YIM_03400 PF13462 Thioredoxin YIM_03405 PF00118 TCP-1/cpn60 chaperonin family YIM_03415 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_03420 PF13378 Enolase C-terminal domain-like YIM_03420 PF18374 Enolase N-terminal domain-like YIM_03425 PF03704 Bacterial transcriptional activator domain YIM_03425 PF00931 NB-ARC domain YIM_03425 PF00486 Transcriptional regulatory protein, C terminal YIM_03435 PF09339 IclR helix-turn-helix domain YIM_03435 PF01614 Bacterial transcriptional regulator YIM_03445 PF04851 Type III restriction enzyme, res subunit YIM_03445 PF00271 Helicase conserved C-terminal domain YIM_03465 PF03932 CutC family YIM_03470 PF07690 Major Facilitator Superfamily YIM_03480 PF00528 Binding-protein-dependent transport system inner membrane component YIM_03495 PF03259 Roadblock/LC7 domain YIM_03510 PF03259 Roadblock/LC7 domain YIM_03530 PF03949 Malic enzyme, NAD binding domain YIM_03530 PF00390 Malic enzyme, N-terminal domain YIM_03535 PF01967 MoaC family YIM_03540 PF02391 MoaE protein YIM_03545 PF06737 Transglycosylase-like domain YIM_03560 PF04055 Radical SAM superfamily YIM_03560 PF06463 Molybdenum Cofactor Synthesis C YIM_03565 PF00145 C-5 cytosine-specific DNA methylase YIM_03565 PF13411 MerR HTH family regulatory protein YIM_03570 PF13344 Haloacid dehalogenase-like hydrolase YIM_03580 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YIM_03595 PF03733 Inner membrane component domain YIM_03600 PF02567 Phenazine biosynthesis-like protein YIM_03605 PF00501 AMP-binding enzyme YIM_03605 PF13193 AMP-binding enzyme C-terminal domain YIM_03610 PF00268 Ribonucleotide reductase, small chain YIM_03620 PF13419 Haloacid dehalogenase-like hydrolase YIM_03630 PF00313 'Cold-shock' DNA-binding domain YIM_03640 PF07690 Major Facilitator Superfamily YIM_03650 PF11228 Protein of unknown function (DUF3027) YIM_03665 PF01494 FAD binding domain YIM_03680 PF00860 Permease family YIM_03685 PF01047 MarR family YIM_03690 PF05977 Transmembrane secretion effector YIM_03700 PF00797 N-acetyltransferase YIM_03705 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YIM_03705 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YIM_03710 PF01126 Heme oxygenase YIM_03725 PF00588 SpoU rRNA Methylase family YIM_03745 PF11268 Protein of unknown function (DUF3071) YIM_03750 PF00672 HAMP domain YIM_03750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_03750 PF00512 His Kinase A (phospho-acceptor) domain YIM_03755 PF00486 Transcriptional regulatory protein, C terminal YIM_03755 PF00072 Response regulator receiver domain YIM_03770 PF12704 MacB-like periplasmic core domain YIM_03770 PF02687 FtsX-like permease family YIM_03770 PF00005 ABC transporter YIM_03775 PF02687 FtsX-like permease family YIM_03775 PF00005 ABC transporter YIM_03775 PF12704 MacB-like periplasmic core domain YIM_03780 PF09594 Glycosyltransferase family 87 YIM_03785 PF00144 Beta-lactamase YIM_03790 PF00266 Aminotransferase class-V YIM_03795 PF00072 Response regulator receiver domain YIM_03795 PF00196 Bacterial regulatory proteins, luxR family YIM_03800 PF07730 Histidine kinase YIM_03800 PF17200 Single Cache domain 2 YIM_03810 PF00005 ABC transporter YIM_03810 PF13732 Domain of unknown function (DUF4162) YIM_03825 PF00106 short chain dehydrogenase YIM_03825 PF00561 alpha/beta hydrolase fold YIM_03830 PF00440 Bacterial regulatory proteins, tetR family YIM_03835 PF00285 Citrate synthase, C-terminal domain YIM_03840 PF00547 Urease, gamma subunit YIM_03845 PF00699 Urease beta subunit YIM_03850 PF00449 Urease alpha-subunit, N-terminal domain YIM_03850 PF01979 Amidohydrolase family YIM_03855 PF01730 UreF YIM_03860 PF02492 CobW/HypB/UreG, nucleotide-binding domain YIM_03865 PF01774 UreD urease accessory protein YIM_03875 PF03583 Secretory lipase YIM_03885 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YIM_03885 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_03900 PF00753 Metallo-beta-lactamase superfamily YIM_03905 PF01263 Aldose 1-epimerase YIM_03910 PF01979 Amidohydrolase family YIM_03915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_03915 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_03915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_03925 PF00294 pfkB family carbohydrate kinase YIM_03930 PF00285 Citrate synthase, C-terminal domain YIM_03935 PF00875 DNA photolyase YIM_03935 PF03441 FAD binding domain of DNA photolyase YIM_03945 PF00005 ABC transporter YIM_03945 PF13732 Domain of unknown function (DUF4162) YIM_03960 PF16901 C-terminal domain of alpha-glycerophosphate oxidase YIM_03960 PF01266 FAD dependent oxidoreductase YIM_03965 PF00440 Bacterial regulatory proteins, tetR family YIM_03970 PF01565 FAD binding domain YIM_03970 PF02913 FAD linked oxidases, C-terminal domain YIM_03985 PF00107 Zinc-binding dehydrogenase YIM_03985 PF08240 Alcohol dehydrogenase GroES-like domain YIM_04005 PF13193 AMP-binding enzyme C-terminal domain YIM_04005 PF00501 AMP-binding enzyme YIM_04015 PF00425 chorismate binding enzyme YIM_04040 PF00375 Sodium:dicarboxylate symporter family YIM_04045 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_04045 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_04045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_04050 PF08240 Alcohol dehydrogenase GroES-like domain YIM_04050 PF00107 Zinc-binding dehydrogenase YIM_04065 PF13193 AMP-binding enzyme C-terminal domain YIM_04065 PF00501 AMP-binding enzyme YIM_04070 PF00378 Enoyl-CoA hydratase/isomerase YIM_04085 PF01325 Iron dependent repressor, N-terminal DNA binding domain YIM_04085 PF02742 Iron dependent repressor, metal binding and dimerisation domain YIM_04085 PF18357 Diphteria toxin repressor SH3 domain YIM_04095 PF00324 Amino acid permease YIM_04105 PF00005 ABC transporter YIM_04120 PF03176 MMPL family YIM_04125 PF00512 His Kinase A (phospho-acceptor) domain YIM_04125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_04125 PF00672 HAMP domain YIM_04130 PF00072 Response regulator receiver domain YIM_04130 PF00486 Transcriptional regulatory protein, C terminal YIM_04140 PF00106 short chain dehydrogenase YIM_04145 PF00561 alpha/beta hydrolase fold YIM_04150 PF00155 Aminotransferase class I and II YIM_04150 PF00392 Bacterial regulatory proteins, gntR family YIM_04165 PF00440 Bacterial regulatory proteins, tetR family YIM_04165 PF16925 Tetracyclin repressor-like, C-terminal domain YIM_04170 PF00857 Isochorismatase family YIM_04175 PF01965 DJ-1/PfpI family YIM_04185 PF00381 PTS HPr component phosphorylation site YIM_04190 PF00561 alpha/beta hydrolase fold YIM_04200 PF00550 Phosphopantetheine attachment site YIM_04200 PF00698 Acyl transferase domain YIM_04200 PF08240 Alcohol dehydrogenase GroES-like domain YIM_04200 PF08990 Erythronolide synthase docking YIM_04200 PF09277 Erythronolide synthase, docking YIM_04200 PF16197 Ketoacyl-synthetase C-terminal extension YIM_04200 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_04200 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_04200 PF08659 KR domain YIM_04200 PF14765 Polyketide synthase dehydratase YIM_04205 PF08240 Alcohol dehydrogenase GroES-like domain YIM_04205 PF00107 Zinc-binding dehydrogenase YIM_04210 PF06441 Epoxide hydrolase N terminus YIM_04225 PF00512 His Kinase A (phospho-acceptor) domain YIM_04225 PF00672 HAMP domain YIM_04225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_04230 PF00072 Response regulator receiver domain YIM_04230 PF00486 Transcriptional regulatory protein, C terminal YIM_04245 PF00005 ABC transporter YIM_04250 PF00005 ABC transporter YIM_04250 PF02687 FtsX-like permease family YIM_04250 PF12704 MacB-like periplasmic core domain YIM_04285 PF13340 Putative transposase of IS4/5 family (DUF4096) YIM_04290 PF06441 Epoxide hydrolase N terminus YIM_04295 PF00561 alpha/beta hydrolase fold YIM_04335 PF00072 Response regulator receiver domain YIM_04335 PF00196 Bacterial regulatory proteins, luxR family YIM_04340 PF03458 UPF0126 domain YIM_04345 PF00486 Transcriptional regulatory protein, C terminal YIM_04345 PF00072 Response regulator receiver domain YIM_04350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_04350 PF00672 HAMP domain YIM_04350 PF00512 His Kinase A (phospho-acceptor) domain YIM_04355 PF08220 DeoR-like helix-turn-helix domain YIM_04355 PF00455 DeoR C terminal sensor domain YIM_04360 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain YIM_04360 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain YIM_04365 PF13180 PDZ domain YIM_04365 PF17820 PDZ domain YIM_04390 PF00535 Glycosyl transferase family 2 YIM_04400 PF00072 Response regulator receiver domain YIM_04400 PF00486 Transcriptional regulatory protein, C terminal YIM_04405 PF16736 Single Cache-like YIM_04405 PF00989 PAS fold YIM_04405 PF00512 His Kinase A (phospho-acceptor) domain YIM_04405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_04410 PF01370 NAD dependent epimerase/dehydratase family YIM_04415 PF01967 MoaC family YIM_04415 PF00994 Probable molybdopterin binding domain YIM_04425 PF01741 Large-conductance mechanosensitive channel, MscL YIM_04440 PF01812 5-formyltetrahydrofolate cyclo-ligase family YIM_04445 PF00483 Nucleotidyl transferase YIM_04450 PF03454 MoeA C-terminal region (domain IV) YIM_04450 PF03453 MoeA N-terminal region (domain I and II) YIM_04450 PF00994 Probable molybdopterin binding domain YIM_04485 PF00005 ABC transporter YIM_04485 PF17760 UvrA interaction domain YIM_04485 PF17755 UvrA DNA-binding domain YIM_04510 PF13460 NAD(P)H-binding YIM_04515 PF00440 Bacterial regulatory proteins, tetR family YIM_04525 PF07730 Histidine kinase YIM_04530 PF00196 Bacterial regulatory proteins, luxR family YIM_04530 PF00072 Response regulator receiver domain YIM_04535 PF03176 MMPL family YIM_04560 PF00171 Aldehyde dehydrogenase family YIM_04570 PF03473 MOSC domain YIM_04570 PF03475 3-alpha domain YIM_04580 PF00728 Glycosyl hydrolase family 20, catalytic domain YIM_04580 PF02838 Glycosyl hydrolase family 20, domain 2 YIM_04585 PF00501 AMP-binding enzyme YIM_04585 PF16177 Acetyl-coenzyme A synthetase N-terminus YIM_04585 PF13193 AMP-binding enzyme C-terminal domain YIM_04590 PF00069 Protein kinase domain YIM_04590 PF03793 PASTA domain YIM_04595 PF00704 Glycosyl hydrolases family 18 YIM_04595 PF00041 Fibronectin type III domain YIM_04595 PF02018 Carbohydrate binding domain YIM_04600 PF05368 NmrA-like family YIM_04605 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase YIM_04605 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase YIM_04610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_04620 PF08240 Alcohol dehydrogenase GroES-like domain YIM_04620 PF00107 Zinc-binding dehydrogenase YIM_04625 PF04715 Anthranilate synthase component I, N terminal region YIM_04625 PF00425 chorismate binding enzyme YIM_04645 PF00005 ABC transporter YIM_04655 PF08264 Anticodon-binding domain of tRNA YIM_04655 PF09334 tRNA synthetases class I (M) YIM_04660 PF01026 TatD related DNase YIM_04665 PF03990 G5-linked-Ubiquitin-like domain YIM_04665 PF07501 G5 domain YIM_04665 PF06737 Transglycosylase-like domain YIM_04670 PF00398 Ribosomal RNA adenine dimethylase YIM_04675 PF09383 NIL domain YIM_04675 PF00005 ABC transporter YIM_04680 PF08544 GHMP kinases C terminal YIM_04680 PF00288 GHMP kinases N terminal domain YIM_04685 PF12848 ABC transporter YIM_04685 PF16326 ABC transporter C-terminal domain YIM_04685 PF00005 ABC transporter YIM_04690 PF00501 AMP-binding enzyme YIM_04690 PF14535 AMP-binding enzyme C-terminal domain YIM_04705 PF01195 Peptidyl-tRNA hydrolase YIM_04710 PF01386 Ribosomal L25p family YIM_04710 PF14693 Ribosomal protein TL5, C-terminal domain YIM_04720 PF00296 Luciferase-like monooxygenase YIM_04725 PF14572 Phosphoribosyl synthetase-associated domain YIM_04725 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase YIM_04730 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_04730 PF12804 MobA-like NTP transferase domain YIM_04735 PF00990 Diguanylate cyclase, GGDEF domain YIM_04735 PF00072 Response regulator receiver domain YIM_04750 PF00440 Bacterial regulatory proteins, tetR family YIM_04765 PF07995 Glucose / Sorbosone dehydrogenase YIM_04770 PF00270 DEAD/DEAH box helicase YIM_04770 PF02559 CarD-like/TRCF domain YIM_04770 PF03461 TRCF domain YIM_04770 PF00271 Helicase conserved C-terminal domain YIM_04770 PF17757 UvrB interaction domain YIM_04780 PF03819 MazG nucleotide pyrophosphohydrolase domain YIM_04800 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_04800 PF13192 Thioredoxin domain YIM_04820 PF00113 Enolase, C-terminal TIM barrel domain YIM_04820 PF03952 Enolase, N-terminal domain YIM_04845 PF02541 Ppx/GppA phosphatase family YIM_04850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_04855 PF00528 Binding-protein-dependent transport system inner membrane component YIM_04865 PF00005 ABC transporter YIM_04865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_04870 PF00005 ABC transporter YIM_04870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_04875 PF00082 Subtilase family YIM_04890 PF03167 Uracil DNA glycosylase superfamily YIM_04910 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_04925 PF00072 Response regulator receiver domain YIM_04925 PF00196 Bacterial regulatory proteins, luxR family YIM_04930 PF07730 Histidine kinase YIM_04935 PF05423 Mycobacterium membrane protein YIM_04940 PF01638 HxlR-like helix-turn-helix YIM_04945 PF07690 Major Facilitator Superfamily YIM_04955 PF01966 HD domain YIM_04955 PF13286 Phosphohydrolase-associated domain YIM_04960 PF01177 Asp/Glu/Hydantoin racemase YIM_04965 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YIM_04970 PF00392 Bacterial regulatory proteins, gntR family YIM_04970 PF07729 FCD domain YIM_04980 PF13411 MerR HTH family regulatory protein YIM_04985 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YIM_04995 PF00106 short chain dehydrogenase YIM_05005 PF04143 Sulphur transport YIM_05010 PF02803 Thiolase, C-terminal domain YIM_05010 PF00108 Thiolase, N-terminal domain YIM_05015 PF00571 CBS domain YIM_05015 PF00291 Pyridoxal-phosphate dependent enzyme YIM_05040 PF01053 Cys/Met metabolism PLP-dependent enzyme YIM_05050 PF00291 Pyridoxal-phosphate dependent enzyme YIM_05050 PF13291 ACT domain YIM_05055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_05060 PF13404 AsnC-type helix-turn-helix domain YIM_05060 PF01037 Lrp/AsnC ligand binding domain YIM_05070 PF01272 Transcription elongation factor, GreA/GreB, C-term YIM_05070 PF03449 Transcription elongation factor, N-terminal YIM_05080 PF02585 GlcNAc-PI de-N-acetylase YIM_05090 PF00149 Calcineurin-like phosphoesterase YIM_05100 PF03190 Protein of unknown function, DUF255 YIM_05120 PF13411 MerR HTH family regulatory protein YIM_05130 PF03006 Haemolysin-III related YIM_05135 PF01255 Putative undecaprenyl diphosphate synthase YIM_05145 PF02562 PhoH-like protein YIM_05145 PF13638 PIN domain YIM_05150 PF00478 IMP dehydrogenase / GMP reductase domain YIM_05150 PF00571 CBS domain YIM_05170 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_05170 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YIM_05195 PF01068 ATP dependent DNA ligase domain YIM_05195 PF04675 DNA ligase N terminus YIM_05195 PF04679 ATP dependent DNA ligase C terminal region YIM_05200 PF12849 PBP superfamily domain YIM_05205 PF00392 Bacterial regulatory proteins, gntR family YIM_05215 PF00248 Aldo/keto reductase family YIM_05230 PF00440 Bacterial regulatory proteins, tetR family YIM_05230 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_05235 PF00206 Lyase YIM_05235 PF10415 Fumarase C C-terminus YIM_05240 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_05245 PF00089 Trypsin YIM_05250 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded YIM_05255 PF02609 Exonuclease VII small subunit YIM_05265 PF13742 OB-fold nucleic acid binding domain YIM_05265 PF02601 Exonuclease VII, large subunit YIM_05275 PF02401 LytB protein YIM_05280 PF00248 Aldo/keto reductase family YIM_05295 PF00149 Calcineurin-like phosphoesterase YIM_05295 PF12320 Type 5 capsule protein repressor C-terminal domain YIM_05300 PF13476 AAA domain YIM_05305 PF06029 AlkA N-terminal domain YIM_05305 PF00730 HhH-GPD superfamily base excision DNA repair protein YIM_05305 PF12833 Helix-turn-helix domain YIM_05305 PF02805 Metal binding domain of Ada YIM_05310 PF06071 Protein of unknown function (DUF933) YIM_05310 PF01926 50S ribosome-binding GTPase YIM_05330 PF01329 Pterin 4 alpha carbinolamine dehydratase YIM_05345 PF00005 ABC transporter YIM_05345 PF08402 TOBE domain YIM_05355 PF00005 ABC transporter YIM_05365 PF00072 Response regulator receiver domain YIM_05365 PF00486 Transcriptional regulatory protein, C terminal YIM_05370 PF00512 His Kinase A (phospho-acceptor) domain YIM_05370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_05370 PF00672 HAMP domain YIM_05375 PF00293 NUDIX domain YIM_05380 PF00579 tRNA synthetases class I (W and Y) YIM_05400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_05415 PF00528 Binding-protein-dependent transport system inner membrane component YIM_05420 PF00528 Binding-protein-dependent transport system inner membrane component YIM_05425 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_05425 PF00005 ABC transporter YIM_05430 PF02585 GlcNAc-PI de-N-acetylase YIM_05450 PF02467 Transcription factor WhiB YIM_05455 PF00535 Glycosyl transferase family 2 YIM_05455 PF00534 Glycosyl transferases group 1 YIM_05470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YIM_05470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YIM_05470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YIM_05470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YIM_05475 PF03966 Trm112p-like protein YIM_05485 PF01238 Phosphomannose isomerase type I YIM_05495 PF07691 PA14 domain YIM_05495 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_05495 PF14310 Fibronectin type III-like domain YIM_05495 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_05510 PF13520 Amino acid permease YIM_05520 PF05221 S-adenosyl-L-homocysteine hydrolase YIM_05520 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain YIM_05525 PF02223 Thymidylate kinase YIM_05530 PF09339 IclR helix-turn-helix domain YIM_05530 PF01614 Bacterial transcriptional regulator YIM_05535 PF00486 Transcriptional regulatory protein, C terminal YIM_05535 PF00072 Response regulator receiver domain YIM_05540 PF00672 HAMP domain YIM_05540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_05540 PF00512 His Kinase A (phospho-acceptor) domain YIM_05545 PF10647 Lipoprotein LpqB beta-propeller domain YIM_05545 PF10646 Sporulation and spore germination YIM_05555 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus YIM_05555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YIM_05560 PF07517 SecA DEAD-like domain YIM_05560 PF01043 SecA preprotein cross-linking domain YIM_05560 PF07516 SecA Wing and Scaffold domain YIM_05575 PF13419 Haloacid dehalogenase-like hydrolase YIM_05580 PF00588 SpoU rRNA Methylase family YIM_05580 PF08032 RNA 2'-O ribose methyltransferase substrate binding YIM_05585 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain YIM_05595 PF00171 Aldehyde dehydrogenase family YIM_05605 PF03193 RsgA GTPase YIM_05610 PF02586 SOS response associated peptidase (SRAP) YIM_05620 PF04073 Aminoacyl-tRNA editing domain YIM_05625 PF04542 Sigma-70 region 2 YIM_05625 PF08281 Sigma-70, region 4 YIM_05630 PF13490 Putative zinc-finger YIM_05635 PF00364 Biotin-requiring enzyme YIM_05640 PF12282 Signal transduction histidine kinase YIM_05640 PF07568 Histidine kinase YIM_05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_05645 PF02467 Transcription factor WhiB YIM_05650 PF00781 Diacylglycerol kinase catalytic domain YIM_05665 PF00300 Histidine phosphatase superfamily (branch 1) YIM_05675 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YIM_05680 PF00390 Malic enzyme, N-terminal domain YIM_05680 PF03949 Malic enzyme, NAD binding domain YIM_05690 PF00005 ABC transporter YIM_05690 PF00571 CBS domain YIM_05695 PF00528 Binding-protein-dependent transport system inner membrane component YIM_05700 PF00528 Binding-protein-dependent transport system inner membrane component YIM_05710 PF13508 Acetyltransferase (GNAT) domain YIM_05715 PF00082 Subtilase family YIM_05715 PF05922 Peptidase inhibitor I9 YIM_05720 PF16870 2-oxoglutarate dehydrogenase C-terminal YIM_05720 PF00676 Dehydrogenase E1 component YIM_05720 PF16078 2-oxoglutarate dehydrogenase N-terminus YIM_05720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_05720 PF02779 Transketolase, pyrimidine binding domain YIM_05760 PF00005 ABC transporter YIM_05760 PF00664 ABC transporter transmembrane region YIM_05770 PF00005 ABC transporter YIM_05775 PF07690 Major Facilitator Superfamily YIM_05780 PF00440 Bacterial regulatory proteins, tetR family YIM_05780 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_05785 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YIM_05785 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YIM_05790 PF08240 Alcohol dehydrogenase GroES-like domain YIM_05790 PF00107 Zinc-binding dehydrogenase YIM_05805 PF13556 PucR C-terminal helix-turn-helix domain YIM_05805 PF17853 GGDEF-like domain YIM_05805 PF06018 CodY GAF-like domain YIM_05815 PF01053 Cys/Met metabolism PLP-dependent enzyme YIM_05820 PF00561 alpha/beta hydrolase fold YIM_05830 PF00440 Bacterial regulatory proteins, tetR family YIM_05835 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_05840 PF00652 Ricin-type beta-trefoil lectin domain YIM_05840 PF00331 Glycosyl hydrolase family 10 YIM_05850 PF01039 Carboxyl transferase domain YIM_05855 PF02785 Biotin carboxylase C-terminal domain YIM_05855 PF00289 Biotin carboxylase, N-terminal domain YIM_05855 PF00364 Biotin-requiring enzyme YIM_05855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_05860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_05860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_05860 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_05870 PF00106 short chain dehydrogenase YIM_05885 PF02698 DUF218 domain YIM_05900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_05900 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_05900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_05910 PF00440 Bacterial regulatory proteins, tetR family YIM_05915 PF02803 Thiolase, C-terminal domain YIM_05915 PF00108 Thiolase, N-terminal domain YIM_05920 PF00378 Enoyl-CoA hydratase/isomerase YIM_05920 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_05920 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_05950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_05950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_05955 PF02913 FAD linked oxidases, C-terminal domain YIM_05955 PF01565 FAD binding domain YIM_05975 PF00171 Aldehyde dehydrogenase family YIM_05980 PF00180 Isocitrate/isopropylmalate dehydrogenase YIM_05985 PF00795 Carbon-nitrogen hydrolase YIM_05990 PF00392 Bacterial regulatory proteins, gntR family YIM_05990 PF07729 FCD domain YIM_05995 PF17645 Arylmalonate decarboxylase YIM_06005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_06010 PF01425 Amidase YIM_06025 PF12706 Beta-lactamase superfamily domain YIM_06030 PF04055 Radical SAM superfamily YIM_06030 PF13186 Iron-sulfur cluster-binding domain YIM_06035 PF05402 Coenzyme PQQ synthesis protein D (PqqD) YIM_06040 PF03070 TENA/THI-4/PQQC family YIM_06050 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain YIM_06050 PF06974 Protein of unknown function (DUF1298) YIM_06055 PF01266 FAD dependent oxidoreductase YIM_06060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_06060 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_06060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_06065 PF01968 Hydantoinase/oxoprolinase YIM_06065 PF05378 Hydantoinase/oxoprolinase N-terminal region YIM_06070 PF02538 Hydantoinase B/oxoprolinase YIM_06085 PF02423 Ornithine cyclodeaminase/mu-crystallin family YIM_06090 PF00171 Aldehyde dehydrogenase family YIM_06095 PF02515 CoA-transferase family III YIM_06120 PF07859 alpha/beta hydrolase fold YIM_06140 PF01022 Bacterial regulatory protein, arsR family YIM_06145 PF00561 alpha/beta hydrolase fold YIM_06165 PF00005 ABC transporter YIM_06170 PF02653 Branched-chain amino acid transport system / permease component YIM_06175 PF02653 Branched-chain amino acid transport system / permease component YIM_06185 PF01261 Xylose isomerase-like TIM barrel YIM_06200 PF13407 Periplasmic binding protein domain YIM_06205 PF00005 ABC transporter YIM_06210 PF02653 Branched-chain amino acid transport system / permease component YIM_06215 PF02653 Branched-chain amino acid transport system / permease component YIM_06220 PF01545 Cation efflux family YIM_06230 PF01810 LysE type translocator YIM_06235 PF03484 tRNA synthetase B5 domain YIM_06235 PF03483 B3/4 domain YIM_06235 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain YIM_06235 PF01588 Putative tRNA binding domain YIM_06235 PF03147 Ferredoxin-fold anticodon binding domain YIM_06245 PF08281 Sigma-70, region 4 YIM_06245 PF04542 Sigma-70 region 2 YIM_06250 PF00920 Dehydratase family YIM_06270 PF05746 DALR anticodon binding domain YIM_06270 PF03485 Arginyl tRNA synthetase N terminal domain YIM_06270 PF00750 tRNA synthetases class I (R) YIM_06275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YIM_06275 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YIM_06280 PF00742 Homoserine dehydrogenase YIM_06280 PF03447 Homoserine dehydrogenase, NAD binding domain YIM_06280 PF01842 ACT domain YIM_06285 PF00291 Pyridoxal-phosphate dependent enzyme YIM_06290 PF00288 GHMP kinases N terminal domain YIM_06295 PF07498 Rho termination factor, N-terminal domain YIM_06295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YIM_06295 PF07497 Rho termination factor, RNA-binding domain YIM_06305 PF01197 Ribosomal protein L31 YIM_06310 PF00472 RF-1 domain YIM_06310 PF03462 PCRF domain YIM_06320 PF00296 Luciferase-like monooxygenase YIM_06325 PF12697 Alpha/beta hydrolase family YIM_06330 PF09278 MerR, DNA binding YIM_06330 PF00376 MerR family regulatory protein YIM_06335 PF05175 Methyltransferase small domain YIM_06335 PF17827 PrmC N-terminal domain YIM_06340 PF01300 Telomere recombination YIM_06345 PF00953 Glycosyl transferase family 4 YIM_06370 PF00119 ATP synthase A chain YIM_06375 PF00137 ATP synthase subunit C YIM_06380 PF00430 ATP synthase B/B' CF(0) YIM_06385 PF00213 ATP synthase delta (OSCP) subunit YIM_06390 PF00306 ATP synthase alpha/beta chain, C terminal domain YIM_06390 PF02874 ATP synthase alpha/beta family, beta-barrel domain YIM_06390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YIM_06395 PF00231 ATP synthase YIM_06400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YIM_06400 PF02874 ATP synthase alpha/beta family, beta-barrel domain YIM_06405 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain YIM_06410 PF10739 Protein of unknown function (DUF2550) YIM_06420 PF01923 Cobalamin adenosyltransferase YIM_06425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YIM_06435 PF01810 LysE type translocator YIM_06445 PF01580 FtsK/SpoIIIE family YIM_06450 PF00378 Enoyl-CoA hydratase/isomerase YIM_06465 PF01939 Endonuclease NucS YIM_06470 PF00474 Sodium:solute symporter family YIM_06485 PF02733 Dak1 domain YIM_06490 PF02734 DAK2 domain YIM_06495 PF05524 PEP-utilising enzyme, N-terminal YIM_06495 PF00381 PTS HPr component phosphorylation site YIM_06495 PF00391 PEP-utilising enzyme, mobile domain YIM_06495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YIM_06495 PF02896 PEP-utilising enzyme, TIM barrel domain YIM_06505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_06505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_06520 PF00704 Glycosyl hydrolases family 18 YIM_06520 PF00041 Fibronectin type III domain YIM_06525 PF00398 Ribosomal RNA adenine dimethylase YIM_06530 PF12852 Cupin YIM_06530 PF12833 Helix-turn-helix domain YIM_06540 PF13302 Acetyltransferase (GNAT) domain YIM_06550 PF00795 Carbon-nitrogen hydrolase YIM_06550 PF02540 NAD synthase YIM_06555 PF07687 Peptidase dimerisation domain YIM_06555 PF01546 Peptidase family M20/M25/M40 YIM_06570 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_06570 PF13191 AAA ATPase domain YIM_06580 PF01043 SecA preprotein cross-linking domain YIM_06580 PF07516 SecA Wing and Scaffold domain YIM_06580 PF07517 SecA DEAD-like domain YIM_06585 PF00561 alpha/beta hydrolase fold YIM_06590 PF00561 alpha/beta hydrolase fold YIM_06600 PF01965 DJ-1/PfpI family YIM_06610 PF00120 Glutamine synthetase, catalytic domain YIM_06610 PF03951 Glutamine synthetase, beta-Grasp domain YIM_06635 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain YIM_06635 PF00117 Glutamine amidotransferase class-I YIM_06640 PF01384 Phosphate transporter family YIM_06645 PF03710 Glutamate-ammonia ligase adenylyltransferase YIM_06645 PF08335 GlnD PII-uridylyltransferase YIM_06655 PF00120 Glutamine synthetase, catalytic domain YIM_06655 PF03951 Glutamine synthetase, beta-Grasp domain YIM_06665 PF13829 Domain of unknown function (DUF4191) YIM_06670 PF13361 UvrD-like helicase C-terminal domain YIM_06670 PF00570 HRDC domain YIM_06670 PF00580 UvrD/REP helicase N-terminal domain YIM_06680 PF02467 Transcription factor WhiB YIM_06705 PF03109 ABC1 family YIM_06725 PF13180 PDZ domain YIM_06725 PF05362 Lon protease (S16) C-terminal proteolytic domain YIM_06735 PF03699 Uncharacterised protein family (UPF0182) YIM_06745 PF13280 WYL domain YIM_06745 PF08279 HTH domain YIM_06765 PF00472 RF-1 domain YIM_06765 PF03462 PCRF domain YIM_06770 PF00005 ABC transporter YIM_06775 PF18075 FtsX extracellular domain YIM_06775 PF02687 FtsX-like permease family YIM_06780 PF01668 SmpB protein YIM_06800 PF01047 MarR family YIM_06810 PF00196 Bacterial regulatory proteins, luxR family YIM_06810 PF00072 Response regulator receiver domain YIM_06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_06815 PF07730 Histidine kinase YIM_06845 PF00403 Heavy-metal-associated domain YIM_06860 PF02583 Metal-sensitive transcriptional repressor YIM_06865 PF00005 ABC transporter YIM_06885 PF00221 Aromatic amino acid lyase YIM_06890 PF17391 Urocanase N-terminal domain YIM_06890 PF17392 Urocanase C-terminal domain YIM_06890 PF01175 Urocanase Rossmann-like domain YIM_06895 PF07687 Peptidase dimerisation domain YIM_06895 PF01546 Peptidase family M20/M25/M40 YIM_06900 PF01979 Amidohydrolase family YIM_06905 PF01979 Amidohydrolase family YIM_06920 PF01738 Dienelactone hydrolase family YIM_06925 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_06930 PF07730 Histidine kinase YIM_06935 PF00072 Response regulator receiver domain YIM_06935 PF00196 Bacterial regulatory proteins, luxR family YIM_06940 PF01494 FAD binding domain YIM_06955 PF01569 PAP2 superfamily YIM_06960 PF00005 ABC transporter YIM_06970 PF00271 Helicase conserved C-terminal domain YIM_06970 PF08482 ATP-dependent helicase C-terminal YIM_06970 PF04408 Helicase associated domain (HA2) YIM_06970 PF00270 DEAD/DEAH box helicase YIM_06975 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_06990 PF00877 NlpC/P60 family YIM_07025 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase YIM_07030 PF00486 Transcriptional regulatory protein, C terminal YIM_07030 PF00931 NB-ARC domain YIM_07030 PF03704 Bacterial transcriptional activator domain YIM_07075 PF00583 Acetyltransferase (GNAT) family YIM_07075 PF00795 Carbon-nitrogen hydrolase YIM_07080 PF00701 Dihydrodipicolinate synthetase family YIM_07110 PF08678 Rsbr N terminal YIM_07110 PF01740 STAS domain YIM_07115 PF01740 STAS domain YIM_07120 PF13581 Histidine kinase-like ATPase domain YIM_07245 PF00440 Bacterial regulatory proteins, tetR family YIM_07245 PF17925 Tetracyclin repressor-like, C-terminal domain YIM_07260 PF00440 Bacterial regulatory proteins, tetR family YIM_07265 PF00561 alpha/beta hydrolase fold YIM_07345 PF00248 Aldo/keto reductase family YIM_07405 PF13419 Haloacid dehalogenase-like hydrolase YIM_07475 PF00990 Diguanylate cyclase, GGDEF domain YIM_07475 PF05230 MASE2 domain YIM_07520 PF00437 Type II/IV secretion system protein YIM_07585 PF08406 CbbQ/NirQ/NorQ C-terminal YIM_07585 PF07728 AAA domain (dynein-related subfamily) YIM_07685 PF02899 Phage integrase, N-terminal SAM-like domain YIM_07685 PF00589 Phage integrase family YIM_07710 PF00877 NlpC/P60 family YIM_07710 PF08239 Bacterial SH3 domain YIM_07710 PF01476 LysM domain YIM_07770 PF00145 C-5 cytosine-specific DNA methylase YIM_07805 PF11774 Lsr2 YIM_07860 PF00486 Transcriptional regulatory protein, C terminal YIM_07860 PF00931 NB-ARC domain YIM_07860 PF03704 Bacterial transcriptional activator domain YIM_07870 PF12697 Alpha/beta hydrolase family YIM_07885 PF03466 LysR substrate binding domain YIM_07885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_07890 PF00282 Pyridoxal-dependent decarboxylase conserved domain YIM_07895 PF00196 Bacterial regulatory proteins, luxR family YIM_07895 PF00072 Response regulator receiver domain YIM_07900 PF03193 RsgA GTPase YIM_07905 PF08241 Methyltransferase domain YIM_07915 PF00067 Cytochrome P450 YIM_07935 PF00890 FAD binding domain YIM_07960 PF05139 Erythromycin esterase YIM_07960 PF00156 Phosphoribosyl transferase domain YIM_07995 PF03780 Asp23 family, cell envelope-related function YIM_08010 PF07690 Major Facilitator Superfamily YIM_08015 PF00455 DeoR C terminal sensor domain YIM_08015 PF08220 DeoR-like helix-turn-helix domain YIM_08025 PF13411 MerR HTH family regulatory protein YIM_08030 PF04951 D-aminopeptidase YIM_08045 PF01638 HxlR-like helix-turn-helix YIM_08055 PF04235 Protein of unknown function (DUF418) YIM_08060 PF07730 Histidine kinase YIM_08065 PF00196 Bacterial regulatory proteins, luxR family YIM_08065 PF00072 Response regulator receiver domain YIM_08075 PF08240 Alcohol dehydrogenase GroES-like domain YIM_08075 PF00107 Zinc-binding dehydrogenase YIM_08080 PF04978 Protein of unknown function (DUF664) YIM_08085 PF07690 Major Facilitator Superfamily YIM_08110 PF00561 alpha/beta hydrolase fold YIM_08115 PF00067 Cytochrome P450 YIM_08120 PF00005 ABC transporter YIM_08120 PF13732 Domain of unknown function (DUF4162) YIM_08125 PF00196 Bacterial regulatory proteins, luxR family YIM_08130 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase YIM_08145 PF12833 Helix-turn-helix domain YIM_08145 PF02311 AraC-like ligand binding domain YIM_08160 PF00440 Bacterial regulatory proteins, tetR family YIM_08160 PF08361 MAATS-type transcriptional repressor, C-terminal region YIM_08170 PF00709 Adenylosuccinate synthetase YIM_08180 PF00069 Protein kinase domain YIM_08180 PF03793 PASTA domain YIM_08185 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain YIM_08210 PF01209 ubiE/COQ5 methyltransferase family YIM_08230 PF13977 BetI-type transcriptional repressor, C-terminal YIM_08230 PF00440 Bacterial regulatory proteins, tetR family YIM_08235 PF00486 Transcriptional regulatory protein, C terminal YIM_08235 PF00931 NB-ARC domain YIM_08235 PF03704 Bacterial transcriptional activator domain YIM_08240 PF02447 GntP family permease YIM_08245 PF02515 CoA-transferase family III YIM_08250 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_08255 PF03466 LysR substrate binding domain YIM_08255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_08275 PF00440 Bacterial regulatory proteins, tetR family YIM_08275 PF16295 Tetracyclin repressor-like, C-terminal domain YIM_08285 PF12833 Helix-turn-helix domain YIM_08285 PF01965 DJ-1/PfpI family YIM_08305 PF00583 Acetyltransferase (GNAT) family YIM_08310 PF00512 His Kinase A (phospho-acceptor) domain YIM_08310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_08310 PF00672 HAMP domain YIM_08315 PF00486 Transcriptional regulatory protein, C terminal YIM_08315 PF00072 Response regulator receiver domain YIM_08330 PF00005 ABC transporter YIM_08345 PF00152 tRNA synthetases class II (D, K and N) YIM_08345 PF01336 OB-fold nucleic acid binding domain YIM_08355 PF03559 NDP-hexose 2,3-dehydratase YIM_08365 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YIM_08370 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_08375 PF13649 Methyltransferase domain YIM_08380 PF06722 Protein of unknown function (DUF1205) YIM_08405 PF00440 Bacterial regulatory proteins, tetR family YIM_08405 PF17932 Tetracyclin repressor-like, C-terminal domain YIM_08410 PF00743 Flavin-binding monooxygenase-like YIM_08420 PF03816 Cell envelope-related transcriptional attenuator domain YIM_08420 PF13399 LytR cell envelope-related transcriptional attenuator YIM_08430 PF00072 Response regulator receiver domain YIM_08430 PF00196 Bacterial regulatory proteins, luxR family YIM_08435 PF00486 Transcriptional regulatory protein, C terminal YIM_08435 PF03704 Bacterial transcriptional activator domain YIM_08435 PF00931 NB-ARC domain YIM_08440 PF00072 Response regulator receiver domain YIM_08440 PF00990 Diguanylate cyclase, GGDEF domain YIM_08450 PF00106 short chain dehydrogenase YIM_08455 PF00501 AMP-binding enzyme YIM_08460 PF00440 Bacterial regulatory proteins, tetR family YIM_08465 PF00501 AMP-binding enzyme YIM_08470 PF00296 Luciferase-like monooxygenase YIM_08480 PF00005 ABC transporter YIM_08485 PF00528 Binding-protein-dependent transport system inner membrane component YIM_08500 PF03259 Roadblock/LC7 domain YIM_08515 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YIM_08515 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YIM_08520 PF04545 Sigma-70, region 4 YIM_08520 PF04542 Sigma-70 region 2 YIM_08525 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YIM_08525 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YIM_08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_08570 PF03259 Roadblock/LC7 domain YIM_08610 PF01699 Sodium/calcium exchanger protein YIM_08615 PF13193 AMP-binding enzyme C-terminal domain YIM_08615 PF00501 AMP-binding enzyme YIM_08620 PF01758 Sodium Bile acid symporter family YIM_08630 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YIM_08635 PF01047 MarR family YIM_08640 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_08640 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding YIM_08640 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_08650 PF00005 ABC transporter YIM_08675 PF04542 Sigma-70 region 2 YIM_08675 PF08281 Sigma-70, region 4 YIM_08705 PF13520 Amino acid permease YIM_08715 PF00196 Bacterial regulatory proteins, luxR family YIM_08715 PF00072 Response regulator receiver domain YIM_08720 PF00486 Transcriptional regulatory protein, C terminal YIM_08720 PF00931 NB-ARC domain YIM_08720 PF03704 Bacterial transcriptional activator domain YIM_08735 PF04686 Streptomyces sporulation and cell division protein, SsgA YIM_08745 PF02585 GlcNAc-PI de-N-acetylase YIM_08750 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase YIM_08760 PF13291 ACT domain YIM_08760 PF00291 Pyridoxal-phosphate dependent enzyme YIM_08780 PF00534 Glycosyl transferases group 1 YIM_08780 PF13439 Glycosyltransferase Family 4 YIM_08790 PF00925 GTP cyclohydrolase II YIM_08795 PF00459 Inositol monophosphatase family YIM_08805 PF02633 Creatinine amidohydrolase YIM_08810 PF03704 Bacterial transcriptional activator domain YIM_08825 PF01047 MarR family YIM_08835 PF00440 Bacterial regulatory proteins, tetR family YIM_08835 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_08895 PF02698 DUF218 domain YIM_08905 PF01555 DNA methylase YIM_08920 PF17964 Bacterial Ig domain YIM_08920 PF03734 L,D-transpeptidase catalytic domain YIM_08930 PF00929 Exonuclease YIM_08935 PF05872 Bacterial protein of unknown function (DUF853) YIM_08950 PF13180 PDZ domain YIM_08960 PF05958 tRNA (Uracil-5-)-methyltransferase YIM_08960 PF01938 TRAM domain YIM_08965 PF00398 Ribosomal RNA adenine dimethylase YIM_08970 PF00730 HhH-GPD superfamily base excision DNA repair protein YIM_08970 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain YIM_08980 PF00171 Aldehyde dehydrogenase family YIM_08990 PF01966 HD domain YIM_09005 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_09005 PF16701 Adenylate cyclase regulatory domain YIM_09010 PF00582 Universal stress protein family YIM_09020 PF00107 Zinc-binding dehydrogenase YIM_09020 PF08240 Alcohol dehydrogenase GroES-like domain YIM_09040 PF02803 Thiolase, C-terminal domain YIM_09040 PF00108 Thiolase, N-terminal domain YIM_09060 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_09060 PF00440 Bacterial regulatory proteins, tetR family YIM_09065 PF00106 short chain dehydrogenase YIM_09070 PF00392 Bacterial regulatory proteins, gntR family YIM_09075 PF02627 Carboxymuconolactone decarboxylase family YIM_09090 PF02653 Branched-chain amino acid transport system / permease component YIM_09095 PF00005 ABC transporter YIM_09105 PF00356 Bacterial regulatory proteins, lacI family YIM_09110 PF12823 Domain of unknown function (DUF3817) YIM_09110 PF03176 MMPL family YIM_09115 PF01047 MarR family YIM_09120 PF01910 Thiamine-binding protein YIM_09125 PF00085 Thioredoxin YIM_09140 PF11897 Protein of unknown function (DUF3417) YIM_09140 PF00343 Carbohydrate phosphorylase YIM_09150 PF00491 Arginase family YIM_09165 PF00005 ABC transporter YIM_09170 PF00378 Enoyl-CoA hydratase/isomerase YIM_09175 PF01209 ubiE/COQ5 methyltransferase family YIM_09180 PF18096 THUMP domain-like YIM_09185 PF00072 Response regulator receiver domain YIM_09185 PF00196 Bacterial regulatory proteins, luxR family YIM_09190 PF07730 Histidine kinase YIM_09205 PF13732 Domain of unknown function (DUF4162) YIM_09205 PF00005 ABC transporter YIM_09215 PF05908 Poly-gamma-glutamate hydrolase YIM_09225 PF13411 MerR HTH family regulatory protein YIM_09230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_09240 PF01565 FAD binding domain YIM_09240 PF08031 Berberine and berberine like YIM_09260 PF00561 alpha/beta hydrolase fold YIM_09265 PF12464 Maltose acetyltransferase YIM_09265 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_09275 PF01022 Bacterial regulatory protein, arsR family YIM_09280 PF00376 MerR family regulatory protein YIM_09280 PF09278 MerR, DNA binding YIM_09285 PF07690 Major Facilitator Superfamily YIM_09290 PF09278 MerR, DNA binding YIM_09290 PF00376 MerR family regulatory protein YIM_09330 PF01494 FAD binding domain YIM_09335 PF01494 FAD binding domain YIM_09370 PF00106 short chain dehydrogenase YIM_09380 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_09380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YIM_09390 PF01476 LysM domain YIM_09390 PF08239 Bacterial SH3 domain YIM_09390 PF00877 NlpC/P60 family YIM_09395 PF01156 Inosine-uridine preferring nucleoside hydrolase YIM_09400 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_09410 PF00291 Pyridoxal-phosphate dependent enzyme YIM_09410 PF00585 C-terminal regulatory domain of Threonine dehydratase YIM_09415 PF01381 Helix-turn-helix YIM_09415 PF06114 IrrE N-terminal-like domain YIM_09415 PF09856 Predicted transcriptional regulator (DUF2083) YIM_09420 PF00463 Isocitrate lyase family YIM_09430 PF01483 Proprotein convertase P-domain YIM_09430 PF04389 Peptidase family M28 YIM_09435 PF13439 Glycosyltransferase Family 4 YIM_09435 PF00534 Glycosyl transferases group 1 YIM_09450 PF00072 Response regulator receiver domain YIM_09450 PF00196 Bacterial regulatory proteins, luxR family YIM_09455 PF07730 Histidine kinase YIM_09455 PF13492 GAF domain YIM_09455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_09455 PF13185 GAF domain YIM_09465 PF00891 O-methyltransferase domain YIM_09470 PF00255 Glutathione peroxidase YIM_09475 PF09210 Domain of unknown function (DUF1957) YIM_09475 PF03065 Glycosyl hydrolase family 57 YIM_09480 PF08241 Methyltransferase domain YIM_09495 PF02645 Uncharacterised protein, DegV family COG1307 YIM_09500 PF01012 Electron transfer flavoprotein domain YIM_09505 PF01012 Electron transfer flavoprotein domain YIM_09505 PF00766 Electron transfer flavoprotein FAD-binding domain YIM_09520 PF07690 Major Facilitator Superfamily YIM_09525 PF00266 Aminotransferase class-V YIM_09545 PF08450 SMP-30/Gluconolactonase/LRE-like region YIM_09550 PF00753 Metallo-beta-lactamase superfamily YIM_09560 PF00795 Carbon-nitrogen hydrolase YIM_09560 PF02540 NAD synthase YIM_09575 PF03120 NAD-dependent DNA ligase OB-fold domain YIM_09575 PF03119 NAD-dependent DNA ligase C4 zinc finger domain YIM_09575 PF01653 NAD-dependent DNA ligase adenylation domain YIM_09575 PF12826 Helix-hairpin-helix motif YIM_09575 PF00533 BRCA1 C Terminus (BRCT) domain YIM_09580 PF00296 Luciferase-like monooxygenase YIM_09590 PF02686 Glu-tRNAGln amidotransferase C subunit YIM_09595 PF01425 Amidase YIM_09605 PF02637 GatB domain YIM_09605 PF02934 GatB/GatE catalytic domain YIM_09625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_09635 PF00920 Dehydratase family YIM_09645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_09645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_09645 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_09650 PF10369 Small subunit of acetolactate synthase YIM_09655 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain YIM_09655 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain YIM_09685 PF00440 Bacterial regulatory proteins, tetR family YIM_09690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_09690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_09690 PF01842 ACT domain YIM_09695 PF13860 FlgD Ig-like domain YIM_09695 PF05922 Peptidase inhibitor I9 YIM_09695 PF02225 PA domain YIM_09695 PF00082 Subtilase family YIM_09700 PF00180 Isocitrate/isopropylmalate dehydrogenase YIM_09705 PF00682 HMGL-like YIM_09705 PF08502 LeuA allosteric (dimerisation) domain YIM_09710 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_09715 PF01494 FAD binding domain YIM_09720 PF00749 tRNA synthetases class I (E and Q), catalytic domain YIM_09725 PF13419 Haloacid dehalogenase-like hydrolase YIM_09740 PF00919 Uncharacterized protein family UPF0004 YIM_09740 PF04055 Radical SAM superfamily YIM_09740 PF01938 TRAM domain YIM_09755 PF00440 Bacterial regulatory proteins, tetR family YIM_09765 PF08240 Alcohol dehydrogenase GroES-like domain YIM_09765 PF00107 Zinc-binding dehydrogenase YIM_09770 PF00534 Glycosyl transferases group 1 YIM_09770 PF13439 Glycosyltransferase Family 4 YIM_09775 PF00535 Glycosyl transferase family 2 YIM_09790 PF01022 Bacterial regulatory protein, arsR family YIM_09795 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_09815 PF00107 Zinc-binding dehydrogenase YIM_09815 PF08240 Alcohol dehydrogenase GroES-like domain YIM_09825 PF00440 Bacterial regulatory proteins, tetR family YIM_09840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_09875 PF00326 Prolyl oligopeptidase family YIM_09875 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region YIM_09885 PF00005 ABC transporter YIM_09900 PF00561 alpha/beta hydrolase fold YIM_09915 PF00326 Prolyl oligopeptidase family YIM_09925 PF02627 Carboxymuconolactone decarboxylase family YIM_09930 PF08281 Sigma-70, region 4 YIM_09930 PF04542 Sigma-70 region 2 YIM_09940 PF00106 short chain dehydrogenase YIM_09950 PF07732 Multicopper oxidase YIM_09950 PF00394 Multicopper oxidase YIM_09950 PF07731 Multicopper oxidase YIM_10005 PF01475 Ferric uptake regulator family YIM_10010 PF00141 Peroxidase YIM_10030 PF07690 Major Facilitator Superfamily YIM_10070 PF00067 Cytochrome P450 YIM_10080 PF03176 MMPL family YIM_10115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_10115 PF07689 KaiB domain YIM_10115 PF00512 His Kinase A (phospho-acceptor) domain YIM_10120 PF00704 Glycosyl hydrolases family 18 YIM_10120 PF00041 Fibronectin type III domain YIM_10125 PF02803 Thiolase, C-terminal domain YIM_10125 PF00108 Thiolase, N-terminal domain YIM_10135 PF13452 N-terminal half of MaoC dehydratase YIM_10140 PF00106 short chain dehydrogenase YIM_10145 PF09339 IclR helix-turn-helix domain YIM_10145 PF01614 Bacterial transcriptional regulator YIM_10150 PF00330 Aconitase family (aconitate hydratase) YIM_10155 PF00694 Aconitase C-terminal domain YIM_10160 PF00216 Bacterial DNA-binding protein YIM_10165 PF00486 Transcriptional regulatory protein, C terminal YIM_10165 PF00931 NB-ARC domain YIM_10165 PF03704 Bacterial transcriptional activator domain YIM_10170 PF00293 NUDIX domain YIM_10170 PF00300 Histidine phosphatase superfamily (branch 1) YIM_10175 PF13089 Polyphosphate kinase N-terminal domain YIM_10175 PF17941 Polyphosphate kinase C-terminal domain 1 YIM_10175 PF02503 Polyphosphate kinase middle domain YIM_10175 PF13090 Polyphosphate kinase C-terminal domain 2 YIM_10190 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YIM_10190 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus YIM_10205 PF00392 Bacterial regulatory proteins, gntR family YIM_10210 PF07478 D-ala D-ala ligase C-terminus YIM_10210 PF01820 D-ala D-ala ligase N-terminus YIM_10230 PF00586 AIR synthase related protein, N-terminal domain YIM_10230 PF02769 AIR synthase related protein, C-terminal domain YIM_10240 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_10245 PF03167 Uracil DNA glycosylase superfamily YIM_10250 PF00830 Ribosomal L28 family YIM_10255 PF13684 Dihydroxyacetone kinase family YIM_10255 PF02734 DAK2 domain YIM_10260 PF17191 RecG wedge domain YIM_10260 PF00271 Helicase conserved C-terminal domain YIM_10260 PF00270 DEAD/DEAH box helicase YIM_10270 PF05139 Erythromycin esterase YIM_10275 PF00512 His Kinase A (phospho-acceptor) domain YIM_10275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_10275 PF02743 Cache domain YIM_10290 PF13340 Putative transposase of IS4/5 family (DUF4096) YIM_10305 PF07286 Protein of unknown function (DUF1445) YIM_10310 PF02682 Carboxyltransferase domain, subdomain C and D YIM_10315 PF02626 Carboxyltransferase domain, subdomain A and B YIM_10320 PF08281 Sigma-70, region 4 YIM_10320 PF04542 Sigma-70 region 2 YIM_10325 PF02656 Domain of unknown function (DUF202) YIM_10330 PF02656 Domain of unknown function (DUF202) YIM_10355 PF02595 Glycerate kinase family YIM_10360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_10360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_10365 PF01047 MarR family YIM_10370 PF01144 Coenzyme A transferase YIM_10375 PF01144 Coenzyme A transferase YIM_10380 PF02803 Thiolase, C-terminal domain YIM_10380 PF00108 Thiolase, N-terminal domain YIM_10385 PF00775 Dioxygenase YIM_10385 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal YIM_10395 PF00561 alpha/beta hydrolase fold YIM_10400 PF02627 Carboxymuconolactone decarboxylase family YIM_10405 PF09339 IclR helix-turn-helix domain YIM_10405 PF01614 Bacterial transcriptional regulator YIM_10410 PF12804 MobA-like NTP transferase domain YIM_10415 PF08220 DeoR-like helix-turn-helix domain YIM_10415 PF00455 DeoR C terminal sensor domain YIM_10420 PF00294 pfkB family carbohydrate kinase YIM_10425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YIM_10425 PF02378 Phosphotransferase system, EIIC YIM_10430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YIM_10430 PF02378 Phosphotransferase system, EIIC YIM_10430 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YIM_10435 PF02378 Phosphotransferase system, EIIC YIM_10435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YIM_10435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YIM_10440 PF08240 Alcohol dehydrogenase GroES-like domain YIM_10440 PF00107 Zinc-binding dehydrogenase YIM_10445 PF00391 PEP-utilising enzyme, mobile domain YIM_10445 PF02896 PEP-utilising enzyme, TIM barrel domain YIM_10445 PF05524 PEP-utilising enzyme, N-terminal YIM_10450 PF05362 Lon protease (S16) C-terminal proteolytic domain YIM_10450 PF02190 ATP-dependent protease La (LON) substrate-binding domain YIM_10450 PF00004 ATPase family associated with various cellular activities (AAA) YIM_10455 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YIM_10455 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YIM_10470 PF01799 [2Fe-2S] binding domain YIM_10470 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_10475 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_10475 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_10480 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_10480 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_10495 PF03795 YCII-related domain YIM_10500 PF09594 Glycosyltransferase family 87 YIM_10505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_10505 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_10505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_10510 PF04962 KduI/IolB family YIM_10520 PF00294 pfkB family carbohydrate kinase YIM_10525 PF00005 ABC transporter YIM_10530 PF02653 Branched-chain amino acid transport system / permease component YIM_10535 PF13407 Periplasmic binding protein domain YIM_10540 PF01261 Xylose isomerase-like TIM barrel YIM_10545 PF00356 Bacterial regulatory proteins, lacI family YIM_10550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_10550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_10565 PF13520 Amino acid permease YIM_10570 PF00120 Glutamine synthetase, catalytic domain YIM_10575 PF07722 Peptidase C26 YIM_10580 PF00171 Aldehyde dehydrogenase family YIM_10590 PF02347 Glycine cleavage system P-protein YIM_10595 PF01571 Aminomethyltransferase folate-binding domain YIM_10595 PF08669 Glycine cleavage T-protein C-terminal barrel domain YIM_10600 PF01597 Glycine cleavage H-protein YIM_10605 PF00464 Serine hydroxymethyltransferase YIM_10610 PF04055 Radical SAM superfamily YIM_10610 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family YIM_10615 PF03313 Serine dehydratase alpha chain YIM_10615 PF03315 Serine dehydratase beta chain YIM_10620 PF00392 Bacterial regulatory proteins, gntR family YIM_10620 PF07729 FCD domain YIM_10625 PF00912 Transglycosylase YIM_10625 PF00905 Penicillin binding protein transpeptidase domain YIM_10630 PF01596 O-methyltransferase YIM_10635 PF00005 ABC transporter YIM_10640 PF00106 short chain dehydrogenase YIM_10650 PF14759 Reductase C-terminal YIM_10650 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_10655 PF00440 Bacterial regulatory proteins, tetR family YIM_10655 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_10660 PF13460 NAD(P)H-binding YIM_10665 PF07690 Major Facilitator Superfamily YIM_10675 PF00999 Sodium/hydrogen exchanger family YIM_10680 PF01070 FMN-dependent dehydrogenase YIM_10690 PF11898 Domain of unknown function (DUF3418) YIM_10690 PF00270 DEAD/DEAH box helicase YIM_10690 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold YIM_10690 PF00271 Helicase conserved C-terminal domain YIM_10690 PF04408 Helicase associated domain (HA2) YIM_10715 PF13193 AMP-binding enzyme C-terminal domain YIM_10715 PF00501 AMP-binding enzyme YIM_10725 PF00082 Subtilase family YIM_10725 PF05922 Peptidase inhibitor I9 YIM_10730 PF00106 short chain dehydrogenase YIM_10755 PF13378 Enolase C-terminal domain-like YIM_10755 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_10760 PF00356 Bacterial regulatory proteins, lacI family YIM_10765 PF00528 Binding-protein-dependent transport system inner membrane component YIM_10775 PF00005 ABC transporter YIM_10780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_10780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_10805 PF04075 F420H(2)-dependent quinone reductase YIM_10820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_10820 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_10825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_10825 PF13378 Enolase C-terminal domain-like YIM_10845 PF00004 ATPase family associated with various cellular activities (AAA) YIM_10845 PF07724 AAA domain (Cdc48 subfamily) YIM_10845 PF17871 AAA lid domain YIM_10845 PF02861 Clp amino terminal domain, pathogenicity island component YIM_10845 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_10855 PF01979 Amidohydrolase family YIM_10870 PF06580 Histidine kinase YIM_10870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_10870 PF07694 5TMR of 5TMR-LYT YIM_10875 PF00072 Response regulator receiver domain YIM_10875 PF04397 LytTr DNA-binding domain YIM_10885 PF00474 Sodium:solute symporter family YIM_10895 PF00474 Sodium:solute symporter family YIM_10900 PF00293 NUDIX domain YIM_10950 PF02405 Permease MlaE YIM_10995 PF00296 Luciferase-like monooxygenase YIM_11000 PF13538 UvrD-like helicase C-terminal domain YIM_11010 PF01467 Cytidylyltransferase-like YIM_11015 PF00545 ribonuclease YIM_11025 PF02620 Large ribosomal RNA subunit accumulation protein YceD YIM_11030 PF01783 Ribosomal L32p protein family YIM_11035 PF14622 Ribonuclease-III-like YIM_11035 PF00035 Double-stranded RNA binding motif YIM_11040 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YIM_11040 PF06827 Zinc finger found in FPG and IleRS YIM_11040 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YIM_11060 PF00480 ROK family YIM_11065 PF00733 Asparagine synthase YIM_11065 PF13537 Glutamine amidotransferase domain YIM_11080 PF03814 Potassium-transporting ATPase A subunit YIM_11090 PF02669 K+-transporting ATPase, c chain YIM_11095 PF02702 Osmosensitive K+ channel His kinase sensor domain YIM_11095 PF00582 Universal stress protein family YIM_11095 PF00512 His Kinase A (phospho-acceptor) domain YIM_11095 PF13493 Domain of unknown function (DUF4118) YIM_11095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_11100 PF00486 Transcriptional regulatory protein, C terminal YIM_11100 PF00072 Response regulator receiver domain YIM_11110 PF00708 Acylphosphatase YIM_11115 PF02463 RecF/RecN/SMC N terminal domain YIM_11115 PF06470 SMC proteins Flexible Hinge Domain YIM_11145 PF00474 Sodium:solute symporter family YIM_11150 PF03702 Anhydro-N-acetylmuramic acid kinase YIM_11155 PF02881 SRP54-type protein, helical bundle domain YIM_11155 PF00448 SRP54-type protein, GTPase domain YIM_11160 PF13302 Acetyltransferase (GNAT) domain YIM_11165 PF01614 Bacterial transcriptional regulator YIM_11165 PF09339 IclR helix-turn-helix domain YIM_11180 PF00375 Sodium:dicarboxylate symporter family YIM_11185 PF05651 Putative sugar diacid recognition YIM_11185 PF13556 PucR C-terminal helix-turn-helix domain YIM_11185 PF17853 GGDEF-like domain YIM_11190 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_11190 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_11195 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_11195 PF01799 [2Fe-2S] binding domain YIM_11200 PF01979 Amidohydrolase family YIM_11205 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_11205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_11215 PF00440 Bacterial regulatory proteins, tetR family YIM_11220 PF00860 Permease family YIM_11225 PF01014 Uricase YIM_11230 PF00576 HIUase/Transthyretin family YIM_11250 PF01979 Amidohydrolase family YIM_11255 PF13380 CoA binding domain YIM_11260 PF01053 Cys/Met metabolism PLP-dependent enzyme YIM_11265 PF00248 Aldo/keto reductase family YIM_11285 PF00909 Ammonium Transporter Family YIM_11290 PF00543 Nitrogen regulatory protein P-II YIM_11295 PF01966 HD domain YIM_11295 PF08335 GlnD PII-uridylyltransferase YIM_11305 PF02735 Ku70/Ku80 beta-barrel domain YIM_11310 PF00448 SRP54-type protein, GTPase domain YIM_11310 PF02978 Signal peptide binding domain YIM_11310 PF02881 SRP54-type protein, helical bundle domain YIM_11315 PF01979 Amidohydrolase family YIM_11330 PF00886 Ribosomal protein S16 YIM_11340 PF01782 RimM N-terminal domain YIM_11340 PF05239 PRC-barrel domain YIM_11345 PF01746 tRNA (Guanine-1)-methyltransferase YIM_11350 PF01245 Ribosomal protein L19 YIM_11355 PF10502 Signal peptidase, peptidase S26 YIM_11360 PF01351 Ribonuclease HII YIM_11365 PF10611 Protein of unknown function (DUF2469) YIM_11370 PF02021 Uncharacterised protein family UPF0102 YIM_11380 PF13335 Magnesium chelatase, subunit ChlI C-terminal YIM_11380 PF01078 Magnesium chelatase, subunit ChlI YIM_11385 PF17782 DprA winged helix domain YIM_11385 PF02481 DNA recombination-mediator protein A YIM_11390 PF02899 Phage integrase, N-terminal SAM-like domain YIM_11390 PF00589 Phage integrase family YIM_11395 PF04542 Sigma-70 region 2 YIM_11395 PF04539 Sigma-70 region 3 YIM_11395 PF04545 Sigma-70, region 4 YIM_11400 PF01551 Peptidase family M23 YIM_11405 PF00318 Ribosomal protein S2 YIM_11410 PF00889 Elongation factor TS YIM_11415 PF00696 Amino acid kinase family YIM_11420 PF01765 Ribosome recycling factor YIM_11435 PF01209 ubiE/COQ5 methyltransferase family YIM_11440 PF03551 Transcriptional regulator PadR-like family YIM_11445 PF04055 Radical SAM superfamily YIM_11475 PF07690 Major Facilitator Superfamily YIM_11485 PF00106 short chain dehydrogenase YIM_11490 PF00550 Phosphopantetheine attachment site YIM_11490 PF00668 Condensation domain YIM_11490 PF13193 AMP-binding enzyme C-terminal domain YIM_11490 PF00501 AMP-binding enzyme YIM_11495 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YIM_11495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YIM_11510 PF00550 Phosphopantetheine attachment site YIM_11510 PF14765 Polyketide synthase dehydratase YIM_11510 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_11510 PF16197 Ketoacyl-synthetase C-terminal extension YIM_11510 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_11510 PF00698 Acyl transferase domain YIM_11510 PF08659 KR domain YIM_11530 PF00975 Thioesterase domain YIM_11530 PF00550 Phosphopantetheine attachment site YIM_11530 PF18369 Polyketide synthase dimerisation element domain YIM_11530 PF16197 Ketoacyl-synthetase C-terminal extension YIM_11530 PF08659 KR domain YIM_11530 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_11530 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_11530 PF00698 Acyl transferase domain YIM_11530 PF08990 Erythronolide synthase docking YIM_11550 PF14765 Polyketide synthase dehydratase YIM_11550 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_11550 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_11550 PF00698 Acyl transferase domain YIM_11550 PF08659 KR domain YIM_11550 PF16197 Ketoacyl-synthetase C-terminal extension YIM_11550 PF08990 Erythronolide synthase docking YIM_11550 PF00550 Phosphopantetheine attachment site YIM_11550 PF08240 Alcohol dehydrogenase GroES-like domain YIM_11565 PF00067 Cytochrome P450 YIM_11575 PF01494 FAD binding domain YIM_11580 PF00698 Acyl transferase domain YIM_11580 PF16197 Ketoacyl-synthetase C-terminal extension YIM_11580 PF00698 Acyl transferase domain YIM_11580 PF00550 Phosphopantetheine attachment site YIM_11580 PF14765 Polyketide synthase dehydratase YIM_11580 PF08659 KR domain YIM_11580 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_11580 PF14765 Polyketide synthase dehydratase YIM_11580 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_11580 PF16197 Ketoacyl-synthetase C-terminal extension YIM_11580 PF00550 Phosphopantetheine attachment site YIM_11580 PF08659 KR domain YIM_11580 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_11580 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_11590 PF08659 KR domain YIM_11590 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_11590 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_11590 PF00698 Acyl transferase domain YIM_11590 PF00550 Phosphopantetheine attachment site YIM_11590 PF16197 Ketoacyl-synthetase C-terminal extension YIM_11590 PF08990 Erythronolide synthase docking YIM_11600 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_11600 PF08240 Alcohol dehydrogenase GroES-like domain YIM_11600 PF00698 Acyl transferase domain YIM_11600 PF14765 Polyketide synthase dehydratase YIM_11600 PF00550 Phosphopantetheine attachment site YIM_11600 PF08659 KR domain YIM_11600 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_11600 PF16197 Ketoacyl-synthetase C-terminal extension YIM_11610 PF00561 alpha/beta hydrolase fold YIM_11615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_11630 PF13193 AMP-binding enzyme C-terminal domain YIM_11630 PF00501 AMP-binding enzyme YIM_11630 PF00550 Phosphopantetheine attachment site YIM_11630 PF00975 Thioesterase domain YIM_11630 PF00668 Condensation domain YIM_11635 PF03704 Bacterial transcriptional activator domain YIM_11640 PF06722 Protein of unknown function (DUF1205) YIM_11645 PF03559 NDP-hexose 2,3-dehydratase YIM_11650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_11655 PF00483 Nucleotidyl transferase YIM_11660 PF04075 F420H(2)-dependent quinone reductase YIM_11710 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family YIM_11735 PF13288 DXP reductoisomerase C-terminal domain YIM_11735 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase YIM_11735 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain YIM_11740 PF17820 PDZ domain YIM_11740 PF02163 Peptidase family M50 YIM_11745 PF04551 GcpE protein YIM_11760 PF00583 Acetyltransferase (GNAT) family YIM_11770 PF00905 Penicillin binding protein transpeptidase domain YIM_11775 PF00557 Metallopeptidase family M24 YIM_11785 PF00083 Sugar (and other) transporter YIM_11795 PF07729 FCD domain YIM_11795 PF00392 Bacterial regulatory proteins, gntR family YIM_11800 PF07690 Major Facilitator Superfamily YIM_11805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_11805 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_11815 PF00089 Trypsin YIM_11820 PF13673 Acetyltransferase (GNAT) domain YIM_11825 PF00155 Aminotransferase class I and II YIM_11835 PF00271 Helicase conserved C-terminal domain YIM_11835 PF00270 DEAD/DEAH box helicase YIM_11850 PF01266 FAD dependent oxidoreductase YIM_11855 PF03883 Peroxide stress protein YaaA YIM_11860 PF13508 Acetyltransferase (GNAT) domain YIM_11860 PF00583 Acetyltransferase (GNAT) family YIM_11865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_11865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_11875 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YIM_11875 PF03129 Anticodon binding domain YIM_11875 PF04073 Aminoacyl-tRNA editing domain YIM_11895 PF01894 Uncharacterised protein family UPF0047 YIM_11900 PF00196 Bacterial regulatory proteins, luxR family YIM_11900 PF00072 Response regulator receiver domain YIM_11915 PF00487 Fatty acid desaturase YIM_11920 PF00175 Oxidoreductase NAD-binding domain YIM_11920 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_11920 PF00970 Oxidoreductase FAD-binding domain YIM_11925 PF00440 Bacterial regulatory proteins, tetR family YIM_11930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YIM_11930 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YIM_11935 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch YIM_11940 PF02233 NAD(P) transhydrogenase beta subunit YIM_11950 PF00403 Heavy-metal-associated domain YIM_11950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_11950 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_11970 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_11970 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_11975 PF00550 Phosphopantetheine attachment site YIM_11985 PF00698 Acyl transferase domain YIM_11990 PF13556 PucR C-terminal helix-turn-helix domain YIM_11990 PF17853 GGDEF-like domain YIM_12010 PF05552 Conserved TM helix YIM_12015 PF04973 Nicotinamide mononucleotide transporter YIM_12020 PF02652 L-lactate permease YIM_12025 PF01070 FMN-dependent dehydrogenase YIM_12030 PF17831 Pyruvate dehydrogenase E1 component middle domain YIM_12030 PF00456 Transketolase, thiamine diphosphate binding domain YIM_12035 PF11253 Protein of unknown function (DUF3052) YIM_12040 PF00578 AhpC/TSA family YIM_12065 PF00300 Histidine phosphatase superfamily (branch 1) YIM_12070 PF00561 alpha/beta hydrolase fold YIM_12075 PF07690 Major Facilitator Superfamily YIM_12085 PF00561 alpha/beta hydrolase fold YIM_12105 PF00400 WD domain, G-beta repeat YIM_12105 PF00069 Protein kinase domain YIM_12115 PF00324 Amino acid permease YIM_12125 PF02811 PHP domain YIM_12125 PF14579 Helix-hairpin-helix motif YIM_12125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YIM_12125 PF07733 Bacterial DNA polymerase III alpha NTPase domain YIM_12125 PF01336 OB-fold nucleic acid binding domain YIM_12130 PF07690 Major Facilitator Superfamily YIM_12140 PF03734 L,D-transpeptidase catalytic domain YIM_12140 PF17964 Bacterial Ig domain YIM_12150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_12150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_12150 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_12155 PF00561 alpha/beta hydrolase fold YIM_12160 PF09335 SNARE associated Golgi protein YIM_12165 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family YIM_12165 PF04055 Radical SAM superfamily YIM_12170 PF00106 short chain dehydrogenase YIM_12180 PF00440 Bacterial regulatory proteins, tetR family YIM_12190 PF03099 Biotin/lipoate A/B protein ligase family YIM_12200 PF08338 Domain of unknown function (DUF1731) YIM_12200 PF01370 NAD dependent epimerase/dehydratase family YIM_12215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_12215 PF00364 Biotin-requiring enzyme YIM_12215 PF02817 e3 binding domain YIM_12220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_12220 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_12235 PF02789 Cytosol aminopeptidase family, N-terminal domain YIM_12235 PF00883 Cytosol aminopeptidase family, catalytic domain YIM_12255 PF01063 Amino-transferase class IV YIM_12260 PF02277 Phosphoribosyltransferase YIM_12265 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YIM_12270 PF00248 Aldo/keto reductase family YIM_12280 PF11241 Protein of unknown function (DUF3043) YIM_12285 PF01521 Iron-sulphur cluster biosynthesis YIM_12290 PF00294 pfkB family carbohydrate kinase YIM_12300 PF09339 IclR helix-turn-helix domain YIM_12300 PF01614 Bacterial transcriptional regulator YIM_12305 PF00005 ABC transporter YIM_12310 PF00528 Binding-protein-dependent transport system inner membrane component YIM_12320 PF00733 Asparagine synthase YIM_12320 PF13537 Glutamine amidotransferase domain YIM_12325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain YIM_12330 PF12270 Cytochrome c oxidase subunit IV YIM_12335 PF00591 Glycosyl transferase family, a/b domain YIM_12335 PF02885 Glycosyl transferase family, helical bundle domain YIM_12345 PF00510 Cytochrome c oxidase subunit III YIM_12350 PF00034 Cytochrome c YIM_12350 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YIM_12355 PF00355 Rieske [2Fe-2S] domain YIM_12360 PF13631 Cytochrome b(N-terminal)/b6/petB YIM_12370 PF00929 Exonuclease YIM_12370 PF01541 GIY-YIG catalytic domain YIM_12385 PF00005 ABC transporter YIM_12400 PF02557 D-alanyl-D-alanine carboxypeptidase YIM_12410 PF00877 NlpC/P60 family YIM_12415 PF00534 Glycosyl transferases group 1 YIM_12415 PF13439 Glycosyltransferase Family 4 YIM_12420 PF04542 Sigma-70 region 2 YIM_12420 PF08281 Sigma-70, region 4 YIM_12420 PF12680 SnoaL-like domain YIM_12430 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_12430 PF00440 Bacterial regulatory proteins, tetR family YIM_12440 PF00067 Cytochrome P450 YIM_12445 PF00202 Aminotransferase class-III YIM_12450 PF00916 Sulfate permease family YIM_12450 PF01740 STAS domain YIM_12460 PF04055 Radical SAM superfamily YIM_12460 PF06968 Biotin and Thiamin Synthesis associated domain YIM_12470 PF01435 Peptidase family M48 YIM_12485 PF02445 Quinolinate synthetase A protein YIM_12490 PF02910 Fumarate reductase flavoprotein C-term YIM_12490 PF00890 FAD binding domain YIM_12495 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain YIM_12495 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain YIM_12500 PF00082 Subtilase family YIM_12510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YIM_12510 PF01872 RibD C-terminal domain YIM_12535 PF01580 FtsK/SpoIIIE family YIM_12550 PF02575 YbaB/EbfC DNA-binding family YIM_12565 PF05108 Type VII secretion system ESX-1, transport TM domain B YIM_12570 PF00196 Bacterial regulatory proteins, luxR family YIM_12570 PF00072 Response regulator receiver domain YIM_12575 PF00795 Carbon-nitrogen hydrolase YIM_12580 PF00815 Histidinol dehydrogenase YIM_12585 PF00266 Aminotransferase class-V YIM_12590 PF00155 Aminotransferase class I and II YIM_12595 PF00475 Imidazoleglycerol-phosphate dehydratase YIM_12605 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family YIM_12610 PF01740 STAS domain YIM_12620 PF00672 HAMP domain YIM_12620 PF07228 Stage II sporulation protein E (SpoIIE) YIM_12625 PF09278 MerR, DNA binding YIM_12625 PF00376 MerR family regulatory protein YIM_12630 PF00456 Transketolase, thiamine diphosphate binding domain YIM_12635 PF02779 Transketolase, pyrimidine binding domain YIM_12655 PF03793 PASTA domain YIM_12655 PF00069 Protein kinase domain YIM_12665 PF01965 DJ-1/PfpI family YIM_12680 PF00270 DEAD/DEAH box helicase YIM_12680 PF00271 Helicase conserved C-terminal domain YIM_12685 PF03405 Fatty acid desaturase YIM_12695 PF02585 GlcNAc-PI de-N-acetylase YIM_12705 PF12706 Beta-lactamase superfamily domain YIM_12710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_12710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_12710 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_12720 PF03259 Roadblock/LC7 domain YIM_12735 PF00528 Binding-protein-dependent transport system inner membrane component YIM_12740 PF00528 Binding-protein-dependent transport system inner membrane component YIM_12745 PF00005 ABC transporter YIM_12755 PF00117 Glutamine amidotransferase class-I YIM_12760 PF00977 Histidine biosynthesis protein YIM_12775 PF00977 Histidine biosynthesis protein YIM_12785 PF01502 Phosphoribosyl-AMP cyclohydrolase YIM_12800 PF17933 Tetracyclin repressor-like, C-terminal domain YIM_12800 PF00440 Bacterial regulatory proteins, tetR family YIM_12805 PF04715 Anthranilate synthase component I, N terminal region YIM_12805 PF00425 chorismate binding enzyme YIM_12815 PF00218 Indole-3-glycerol phosphate synthase YIM_12820 PF00291 Pyridoxal-phosphate dependent enzyme YIM_12825 PF00290 Tryptophan synthase alpha chain YIM_12835 PF00528 Binding-protein-dependent transport system inner membrane component YIM_12845 PF00005 ABC transporter YIM_12855 PF00291 Pyridoxal-phosphate dependent enzyme YIM_12885 PF00440 Bacterial regulatory proteins, tetR family YIM_12885 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_12890 PF01790 Prolipoprotein diacylglyceryl transferase YIM_12895 PF01493 GXGXG motif YIM_12895 PF01645 Conserved region in glutamate synthase YIM_12895 PF00310 Glutamine amidotransferases class-II YIM_12895 PF04898 Glutamate synthase central domain YIM_12900 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YIM_12900 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_12910 PF03466 LysR substrate binding domain YIM_12910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_12925 PF01474 Class-II DAHP synthetase family YIM_12930 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain YIM_12930 PF06974 Protein of unknown function (DUF1298) YIM_12940 PF04542 Sigma-70 region 2 YIM_12940 PF08281 Sigma-70, region 4 YIM_12940 PF12680 SnoaL-like domain YIM_12945 PF15975 Flotillin YIM_12945 PF01145 SPFH domain / Band 7 family YIM_12955 PF03793 PASTA domain YIM_12955 PF00069 Protein kinase domain YIM_12960 PF18367 Rv2175c C-terminal domain of unknown function YIM_12970 PF00296 Luciferase-like monooxygenase YIM_12980 PF01593 Flavin containing amine oxidoreductase YIM_13005 PF02219 Methylenetetrahydrofolate reductase YIM_13015 PF03466 LysR substrate binding domain YIM_13015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_13020 PF13291 ACT domain YIM_13020 PF00291 Pyridoxal-phosphate dependent enzyme YIM_13065 PF01327 Polypeptide deformylase YIM_13070 PF00271 Helicase conserved C-terminal domain YIM_13070 PF08494 DEAD/H associated YIM_13070 PF00270 DEAD/DEAH box helicase YIM_13075 PF00012 Hsp70 protein YIM_13090 PF00154 recA bacterial DNA recombination protein YIM_13095 PF02631 RecX family YIM_13105 PF01081 KDPG and KHG aldolase YIM_13110 PF00920 Dehydratase family YIM_13125 PF00890 FAD binding domain YIM_13125 PF02910 Fumarate reductase flavoprotein C-term YIM_13130 PF13085 2Fe-2S iron-sulfur cluster binding domain YIM_13130 PF13183 4Fe-4S dicluster domain YIM_13135 PF00528 Binding-protein-dependent transport system inner membrane component YIM_13140 PF00528 Binding-protein-dependent transport system inner membrane component YIM_13145 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_13150 PF00005 ABC transporter YIM_13155 PF00072 Response regulator receiver domain YIM_13155 PF00486 Transcriptional regulatory protein, C terminal YIM_13160 PF00512 His Kinase A (phospho-acceptor) domain YIM_13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_13160 PF00672 HAMP domain YIM_13175 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system YIM_13180 PF00919 Uncharacterized protein family UPF0004 YIM_13180 PF04055 Radical SAM superfamily YIM_13185 PF00919 Uncharacterized protein family UPF0004 YIM_13185 PF04055 Radical SAM superfamily YIM_13195 PF03993 Domain of Unknown Function (DUF349) YIM_13210 PF01678 Diaminopimelate epimerase YIM_13590 PF07690 Major Facilitator Superfamily YIM_13600 PF13167 GTP-binding GTPase N-terminal YIM_13600 PF16360 GTP-binding GTPase Middle Region YIM_13600 PF01926 50S ribosome-binding GTPase YIM_13610 PF01726 LexA DNA binding domain YIM_13610 PF00717 Peptidase S24-like YIM_13625 PF03477 ATP cone domain YIM_13645 PF01370 NAD dependent epimerase/dehydratase family YIM_13645 PF08338 Domain of unknown function (DUF1731) YIM_13655 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YIM_13655 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_13665 PF04434 SWIM zinc finger YIM_13670 PF12419 SNF2 Helicase protein YIM_13670 PF00271 Helicase conserved C-terminal domain YIM_13670 PF00176 SNF2 family N-terminal domain YIM_13675 PF01979 Amidohydrolase family YIM_13685 PF00440 Bacterial regulatory proteins, tetR family YIM_13690 PF02525 Flavodoxin-like fold YIM_13695 PF00893 Small Multidrug Resistance protein YIM_13700 PF00326 Prolyl oligopeptidase family YIM_13700 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain YIM_13705 PF04228 Putative neutral zinc metallopeptidase YIM_13710 PF00392 Bacterial regulatory proteins, gntR family YIM_13710 PF00155 Aminotransferase class I and II YIM_13715 PF00561 alpha/beta hydrolase fold YIM_13720 PF00571 CBS domain YIM_13740 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YIM_13740 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YIM_13745 PF01551 Peptidase family M23 YIM_13745 PF01476 LysM domain YIM_13765 PF01370 NAD dependent epimerase/dehydratase family YIM_13770 PF00288 GHMP kinases N terminal domain YIM_13770 PF08544 GHMP kinases C terminal YIM_13770 PF10509 Galactokinase galactose-binding signature YIM_13775 PF01325 Iron dependent repressor, N-terminal DNA binding domain YIM_13775 PF02742 Iron dependent repressor, metal binding and dimerisation domain YIM_13775 PF18357 Diphteria toxin repressor SH3 domain YIM_13780 PF00581 Rhodanese-like domain YIM_13785 PF00850 Histone deacetylase domain YIM_13805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_13805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_13810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_13810 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_13810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_13815 PF00106 short chain dehydrogenase YIM_13825 PF02405 Permease MlaE YIM_13830 PF02405 Permease MlaE YIM_13875 PF02875 Mur ligase family, glutamate ligase domain YIM_13875 PF01225 Mur ligase family, catalytic domain YIM_13875 PF08245 Mur ligase middle domain YIM_13880 PF01225 Mur ligase family, catalytic domain YIM_13880 PF02875 Mur ligase family, glutamate ligase domain YIM_13880 PF08245 Mur ligase middle domain YIM_13885 PF00953 Glycosyl transferase family 4 YIM_13885 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 YIM_13890 PF08245 Mur ligase middle domain YIM_13895 PF01098 Cell cycle protein YIM_13900 PF04101 Glycosyltransferase family 28 C-terminal domain YIM_13900 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_13905 PF02875 Mur ligase family, glutamate ligase domain YIM_13905 PF01225 Mur ligase family, catalytic domain YIM_13905 PF08245 Mur ligase middle domain YIM_13910 PF08478 POTRA domain, FtsQ-type YIM_13910 PF03799 Cell division protein FtsQ YIM_13920 PF04978 Protein of unknown function (DUF664) YIM_13935 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_13935 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YIM_13945 PF04542 Sigma-70 region 2 YIM_13945 PF04545 Sigma-70, region 4 YIM_13950 PF10099 Anti-sigma-K factor rskA YIM_13955 PF12327 FtsZ family, C-terminal domain YIM_13955 PF00091 Tubulin/FtsZ family, GTPase domain YIM_13965 PF01168 Alanine racemase, N-terminal domain YIM_13970 PF04472 Cell division protein SepF YIM_13980 PF05103 DivIVA protein YIM_14000 PF00133 tRNA synthetases class I (I, L, M and V) YIM_14000 PF08264 Anticodon-binding domain of tRNA YIM_14005 PF00905 Penicillin binding protein transpeptidase domain YIM_14015 PF03471 Transporter associated domain YIM_14015 PF00999 Sodium/hydrogen exchanger family YIM_14025 PF00266 Aminotransferase class-V YIM_14030 PF00155 Aminotransferase class I and II YIM_14040 PF01252 Signal peptidase (SPase) II YIM_14045 PF00849 RNA pseudouridylate synthase YIM_14055 PF04542 Sigma-70 region 2 YIM_14055 PF12680 SnoaL-like domain YIM_14055 PF08281 Sigma-70, region 4 YIM_14080 PF00005 ABC transporter YIM_14080 PF13732 Domain of unknown function (DUF4162) YIM_14085 PF00440 Bacterial regulatory proteins, tetR family YIM_14090 PF00501 AMP-binding enzyme YIM_14110 PF02374 Anion-transporting ATPase YIM_14110 PF17886 HSP20-like domain found in ArsA YIM_14120 PF00480 ROK family YIM_14130 PF04107 Glutamate-cysteine ligase family 2(GCS2) YIM_14140 PF12146 Serine aminopeptidase, S33 YIM_14145 PF01553 Acyltransferase YIM_14150 PF16473 3' exoribonuclease, RNase T-like YIM_14155 PF00793 DAHP synthetase I family YIM_14165 PF00365 Phosphofructokinase YIM_14170 PF00221 Aromatic amino acid lyase YIM_14175 PF00553 Cellulose binding domain YIM_14175 PF00704 Glycosyl hydrolases family 18 YIM_14175 PF00041 Fibronectin type III domain YIM_14190 PF00224 Pyruvate kinase, barrel domain YIM_14190 PF02887 Pyruvate kinase, alpha/beta domain YIM_14220 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_14220 PF13191 AAA ATPase domain YIM_14225 PF00795 Carbon-nitrogen hydrolase YIM_14235 PF00171 Aldehyde dehydrogenase family YIM_14245 PF00440 Bacterial regulatory proteins, tetR family YIM_14250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_14250 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_14250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_14255 PF02515 CoA-transferase family III YIM_14285 PF07690 Major Facilitator Superfamily YIM_14300 PF02675 S-adenosylmethionine decarboxylase YIM_14305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YIM_14305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YIM_14310 PF00474 Sodium:solute symporter family YIM_14325 PF03259 Roadblock/LC7 domain YIM_14340 PF01642 Methylmalonyl-CoA mutase YIM_14340 PF02310 B12 binding domain YIM_14360 PF00296 Luciferase-like monooxygenase YIM_14365 PF00296 Luciferase-like monooxygenase YIM_14370 PF00440 Bacterial regulatory proteins, tetR family YIM_14370 PF17925 Tetracyclin repressor-like, C-terminal domain YIM_14375 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_14375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_14375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_14380 PF12419 SNF2 Helicase protein YIM_14380 PF00176 SNF2 family N-terminal domain YIM_14380 PF00271 Helicase conserved C-terminal domain YIM_14385 PF02525 Flavodoxin-like fold YIM_14390 PF01965 DJ-1/PfpI family YIM_14390 PF12833 Helix-turn-helix domain YIM_14395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_14395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_14400 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_14400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_14400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_14425 PF00970 Oxidoreductase FAD-binding domain YIM_14425 PF00175 Oxidoreductase NAD-binding domain YIM_14425 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_14435 PF00355 Rieske [2Fe-2S] domain YIM_14445 PF00890 FAD binding domain YIM_14450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_14450 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_14455 PF12697 Alpha/beta hydrolase family YIM_14460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_14465 PF01613 Flavin reductase like domain YIM_14470 PF13193 AMP-binding enzyme C-terminal domain YIM_14470 PF00668 Condensation domain YIM_14470 PF07993 Male sterility protein YIM_14470 PF00550 Phosphopantetheine attachment site YIM_14470 PF00501 AMP-binding enzyme YIM_14480 PF00378 Enoyl-CoA hydratase/isomerase YIM_14485 PF04545 Sigma-70, region 4 YIM_14485 PF04542 Sigma-70 region 2 YIM_14495 PF00487 Fatty acid desaturase YIM_14500 PF14602 Hexapeptide repeat of succinyl-transferase YIM_14500 PF12464 Maltose acetyltransferase YIM_14505 PF00561 alpha/beta hydrolase fold YIM_14515 PF00108 Thiolase, N-terminal domain YIM_14515 PF02803 Thiolase, C-terminal domain YIM_14520 PF00067 Cytochrome P450 YIM_14525 PF01209 ubiE/COQ5 methyltransferase family YIM_14535 PF02803 Thiolase, C-terminal domain YIM_14535 PF00108 Thiolase, N-terminal domain YIM_14545 PF13193 AMP-binding enzyme C-terminal domain YIM_14545 PF00501 AMP-binding enzyme YIM_14550 PF05175 Methyltransferase small domain YIM_14555 PF00378 Enoyl-CoA hydratase/isomerase YIM_14560 PF00501 AMP-binding enzyme YIM_14560 PF13193 AMP-binding enzyme C-terminal domain YIM_14565 PF03060 Nitronate monooxygenase YIM_14570 PF13520 Amino acid permease YIM_14575 PF07702 UTRA domain YIM_14575 PF00392 Bacterial regulatory proteins, gntR family YIM_14595 PF05683 Fumarase C-terminus YIM_14595 PF05681 Fumarate hydratase (Fumerase) YIM_14600 PF04545 Sigma-70, region 4 YIM_14600 PF00140 Sigma-70 factor, region 1.2 YIM_14600 PF04542 Sigma-70 region 2 YIM_14600 PF04539 Sigma-70 region 3 YIM_14605 PF02580 D-Tyr-tRNA(Tyr) deacylase YIM_14610 PF05175 Methyltransferase small domain YIM_14620 PF07687 Peptidase dimerisation domain YIM_14620 PF01546 Peptidase family M20/M25/M40 YIM_14630 PF00294 pfkB family carbohydrate kinase YIM_14635 PF04227 Indigoidine synthase A like protein YIM_14655 PF00873 AcrB/AcrD/AcrF family YIM_14665 PF04851 Type III restriction enzyme, res subunit YIM_14670 PF13407 Periplasmic binding protein domain YIM_14675 PF00005 ABC transporter YIM_14680 PF02653 Branched-chain amino acid transport system / permease component YIM_14700 PF00072 Response regulator receiver domain YIM_14700 PF00196 Bacterial regulatory proteins, luxR family YIM_14740 PF13340 Putative transposase of IS4/5 family (DUF4096) YIM_14750 PF00175 Oxidoreductase NAD-binding domain YIM_14750 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_14760 PF00743 Flavin-binding monooxygenase-like YIM_14765 PF01370 NAD dependent epimerase/dehydratase family YIM_14770 PF09339 IclR helix-turn-helix domain YIM_14770 PF01614 Bacterial transcriptional regulator YIM_14775 PF00701 Dihydrodipicolinate synthetase family YIM_14785 PF00171 Aldehyde dehydrogenase family YIM_14790 PF02278 Polysaccharide lyase family 8, super-sandwich domain YIM_14790 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain YIM_14790 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain YIM_14800 PF00106 short chain dehydrogenase YIM_14815 PF16499 Alpha galactosidase A YIM_14815 PF17801 Alpha galactosidase C-terminal beta sandwich domain YIM_14825 PF01323 DSBA-like thioredoxin domain YIM_14835 PF00011 Hsp20/alpha crystallin family YIM_14850 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_14850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_14850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_14855 PF00107 Zinc-binding dehydrogenase YIM_14855 PF08240 Alcohol dehydrogenase GroES-like domain YIM_14855 PF13823 Alcohol dehydrogenase GroES-associated YIM_14860 PF00871 Acetokinase family YIM_14865 PF09364 XFP N-terminal domain YIM_14865 PF09363 XFP C-terminal domain YIM_14865 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase YIM_14895 PF00115 Cytochrome C and Quinol oxidase polypeptide I YIM_14900 PF01022 Bacterial regulatory protein, arsR family YIM_14910 PF03167 Uracil DNA glycosylase superfamily YIM_14930 PF07728 AAA domain (dynein-related subfamily) YIM_14940 PF05762 VWA domain containing CoxE-like protein YIM_14950 PF01179 Copper amine oxidase, enzyme domain YIM_14950 PF02728 Copper amine oxidase, N3 domain YIM_14960 PF01168 Alanine racemase, N-terminal domain YIM_14960 PF14031 Putative serine dehydratase domain YIM_14975 PF00296 Luciferase-like monooxygenase YIM_14980 PF00440 Bacterial regulatory proteins, tetR family YIM_14985 PF01068 ATP dependent DNA ligase domain YIM_14985 PF13298 DNA polymerase Ligase (LigD) YIM_14985 PF04679 ATP dependent DNA ligase C terminal region YIM_14995 PF00005 ABC transporter YIM_14995 PF03459 TOBE domain YIM_15000 PF00528 Binding-protein-dependent transport system inner membrane component YIM_15015 PF07690 Major Facilitator Superfamily YIM_15025 PF01370 NAD dependent epimerase/dehydratase family YIM_15035 PF00440 Bacterial regulatory proteins, tetR family YIM_15035 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_15050 PF03551 Transcriptional regulator PadR-like family YIM_15055 PF00005 ABC transporter YIM_15075 PF00005 ABC transporter YIM_15085 PF00072 Response regulator receiver domain YIM_15085 PF00196 Bacterial regulatory proteins, luxR family YIM_15090 PF12823 Domain of unknown function (DUF3817) YIM_15090 PF03176 MMPL family YIM_15095 PF00069 Protein kinase domain YIM_15095 PF07238 PilZ domain YIM_15100 PF00069 Protein kinase domain YIM_15100 PF13462 Thioredoxin YIM_15110 PF00440 Bacterial regulatory proteins, tetR family YIM_15120 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YIM_15125 PF00891 O-methyltransferase domain YIM_15145 PF00348 Polyprenyl synthetase YIM_15150 PF00155 Aminotransferase class I and II YIM_15155 PF06722 Protein of unknown function (DUF1205) YIM_15165 PF04542 Sigma-70 region 2 YIM_15165 PF08281 Sigma-70, region 4 YIM_15165 PF12680 SnoaL-like domain YIM_15170 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA YIM_15195 PF02954 Bacterial regulatory protein, Fis family YIM_15195 PF01590 GAF domain YIM_15210 PF00107 Zinc-binding dehydrogenase YIM_15210 PF08240 Alcohol dehydrogenase GroES-like domain YIM_15215 PF04075 F420H(2)-dependent quinone reductase YIM_15225 PF00561 alpha/beta hydrolase fold YIM_15230 PF00931 NB-ARC domain YIM_15230 PF03704 Bacterial transcriptional activator domain YIM_15230 PF00486 Transcriptional regulatory protein, C terminal YIM_15235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_15235 PF03466 LysR substrate binding domain YIM_15265 PF09339 IclR helix-turn-helix domain YIM_15265 PF01614 Bacterial transcriptional regulator YIM_15275 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal YIM_15275 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal YIM_15280 PF04444 Catechol dioxygenase N terminus YIM_15280 PF00775 Dioxygenase YIM_15285 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_15285 PF13378 Enolase C-terminal domain-like YIM_15290 PF02426 Muconolactone delta-isomerase YIM_15295 PF01156 Inosine-uridine preferring nucleoside hydrolase YIM_15315 PF00067 Cytochrome P450 YIM_15345 PF03780 Asp23 family, cell envelope-related function YIM_15355 PF02469 Fasciclin domain YIM_15365 PF07228 Stage II sporulation protein E (SpoIIE) YIM_15370 PF00360 Phytochrome region YIM_15370 PF00512 His Kinase A (phospho-acceptor) domain YIM_15370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_15370 PF01590 GAF domain YIM_15370 PF08446 PAS fold YIM_15375 PF00072 Response regulator receiver domain YIM_15385 PF00440 Bacterial regulatory proteins, tetR family YIM_15400 PF01494 FAD binding domain YIM_15415 PF00196 Bacterial regulatory proteins, luxR family YIM_15415 PF00072 Response regulator receiver domain YIM_15420 PF07730 Histidine kinase YIM_15440 PF04686 Streptomyces sporulation and cell division protein, SsgA YIM_15470 PF01555 DNA methylase YIM_15485 PF13649 Methyltransferase domain YIM_15520 PF00107 Zinc-binding dehydrogenase YIM_15520 PF08240 Alcohol dehydrogenase GroES-like domain YIM_15525 PF00561 alpha/beta hydrolase fold YIM_15530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_15530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_15545 PF08659 KR domain YIM_15545 PF00550 Phosphopantetheine attachment site YIM_15545 PF14765 Polyketide synthase dehydratase YIM_15545 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_15545 PF00698 Acyl transferase domain YIM_15545 PF08240 Alcohol dehydrogenase GroES-like domain YIM_15545 PF16197 Ketoacyl-synthetase C-terminal extension YIM_15545 PF00107 Zinc-binding dehydrogenase YIM_15545 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_15550 PF01638 HxlR-like helix-turn-helix YIM_15555 PF01565 FAD binding domain YIM_15555 PF08031 Berberine and berberine like YIM_15560 PF00296 Luciferase-like monooxygenase YIM_15570 PF00171 Aldehyde dehydrogenase family YIM_15590 PF08240 Alcohol dehydrogenase GroES-like domain YIM_15590 PF00107 Zinc-binding dehydrogenase YIM_15600 PF00248 Aldo/keto reductase family YIM_15645 PF01032 FecCD transport family YIM_15650 PF01032 FecCD transport family YIM_15655 PF00005 ABC transporter YIM_15660 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_15660 PF01799 [2Fe-2S] binding domain YIM_15660 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_15665 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_15665 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_15670 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_15670 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_15675 PF12833 Helix-turn-helix domain YIM_15675 PF06719 AraC-type transcriptional regulator N-terminus YIM_15680 PF13360 PQQ-like domain YIM_15680 PF00069 Protein kinase domain YIM_15690 PF00440 Bacterial regulatory proteins, tetR family YIM_15710 PF01022 Bacterial regulatory protein, arsR family YIM_15725 PF01370 NAD dependent epimerase/dehydratase family YIM_15745 PF07859 alpha/beta hydrolase fold YIM_15755 PF03737 Aldolase/RraA YIM_15760 PF00694 Aconitase C-terminal domain YIM_15765 PF00330 Aconitase family (aconitate hydratase) YIM_15790 PF08719 Domain of unknown function (DUF1768) YIM_15800 PF03527 RHS protein YIM_15800 PF05593 RHS Repeat YIM_15815 PF00544 Pectate lyase YIM_15820 PF13199 Glycosyl hydrolase family 66 YIM_15820 PF03422 Carbohydrate binding module (family 6) YIM_15820 PF16990 Carbohydrate binding module (family 35) YIM_15835 PF07690 Major Facilitator Superfamily YIM_15850 PF00931 NB-ARC domain YIM_15850 PF00486 Transcriptional regulatory protein, C terminal YIM_15850 PF03704 Bacterial transcriptional activator domain YIM_15855 PF14765 Polyketide synthase dehydratase YIM_15855 PF16197 Ketoacyl-synthetase C-terminal extension YIM_15855 PF00698 Acyl transferase domain YIM_15855 PF08659 KR domain YIM_15855 PF00550 Phosphopantetheine attachment site YIM_15855 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_15855 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_15860 PF00550 Phosphopantetheine attachment site YIM_15860 PF00668 Condensation domain YIM_15860 PF13193 AMP-binding enzyme C-terminal domain YIM_15860 PF00501 AMP-binding enzyme YIM_15865 PF01494 FAD binding domain YIM_15875 PF06965 Na+/H+ antiporter 1 YIM_15880 PF02683 Cytochrome C biogenesis protein transmembrane region YIM_15885 PF00578 AhpC/TSA family YIM_15905 PF00486 Transcriptional regulatory protein, C terminal YIM_15905 PF00931 NB-ARC domain YIM_15905 PF03704 Bacterial transcriptional activator domain YIM_15910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_15910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_15920 PF07690 Major Facilitator Superfamily YIM_15925 PF01022 Bacterial regulatory protein, arsR family YIM_15935 PF13088 BNR repeat-like domain YIM_15935 PF02973 Sialidase, N-terminal domain YIM_15935 PF04650 YSIRK type signal peptide YIM_15945 PF00005 ABC transporter YIM_15945 PF12704 MacB-like periplasmic core domain YIM_15945 PF02687 FtsX-like permease family YIM_15965 PF00440 Bacterial regulatory proteins, tetR family YIM_15990 PF16499 Alpha galactosidase A YIM_15990 PF17801 Alpha galactosidase C-terminal beta sandwich domain YIM_15995 PF04616 Glycosyl hydrolases family 43 YIM_15995 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain YIM_16000 PF00652 Ricin-type beta-trefoil lectin domain YIM_16000 PF03664 Glycosyl hydrolase family 62 YIM_16005 PF00759 Glycosyl hydrolase family 9 YIM_16005 PF00041 Fibronectin type III domain YIM_16005 PF00942 Cellulose binding domain YIM_16005 PF00553 Cellulose binding domain YIM_16010 PF01965 DJ-1/PfpI family YIM_16040 PF01212 Beta-eliminating lyase YIM_16045 PF00999 Sodium/hydrogen exchanger family YIM_16050 PF04820 Tryptophan halogenase YIM_16055 PF13193 AMP-binding enzyme C-terminal domain YIM_16055 PF00550 Phosphopantetheine attachment site YIM_16055 PF00668 Condensation domain YIM_16055 PF00501 AMP-binding enzyme YIM_16070 PF01451 Low molecular weight phosphotyrosine protein phosphatase YIM_16075 PF01022 Bacterial regulatory protein, arsR family YIM_16080 PF01758 Sodium Bile acid symporter family YIM_16090 PF01061 ABC-2 type transporter YIM_16095 PF00005 ABC transporter YIM_16095 PF13732 Domain of unknown function (DUF4162) YIM_16110 PF01494 FAD binding domain YIM_16125 PF12680 SnoaL-like domain YIM_16125 PF08281 Sigma-70, region 4 YIM_16125 PF04542 Sigma-70 region 2 YIM_16130 PF00557 Metallopeptidase family M24 YIM_16140 PF07690 Major Facilitator Superfamily YIM_16145 PF09278 MerR, DNA binding YIM_16145 PF00376 MerR family regulatory protein YIM_16150 PF00107 Zinc-binding dehydrogenase YIM_16150 PF08240 Alcohol dehydrogenase GroES-like domain YIM_16170 PF01494 FAD binding domain YIM_16175 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_16175 PF00175 Oxidoreductase NAD-binding domain YIM_16190 PF02447 GntP family permease YIM_16195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_16195 PF03466 LysR substrate binding domain YIM_16200 PF00180 Isocitrate/isopropylmalate dehydrogenase YIM_16205 PF02595 Glycerate kinase family YIM_16210 PF07690 Major Facilitator Superfamily YIM_16215 PF01638 HxlR-like helix-turn-helix YIM_16230 PF00295 Glycosyl hydrolases family 28 YIM_16245 PF03704 Bacterial transcriptional activator domain YIM_16245 PF00486 Transcriptional regulatory protein, C terminal YIM_16245 PF00931 NB-ARC domain YIM_16250 PF03466 LysR substrate binding domain YIM_16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_16255 PF07690 Major Facilitator Superfamily YIM_16315 PF01261 Xylose isomerase-like TIM barrel YIM_16320 PF01842 ACT domain YIM_16320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_16320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_16350 PF00266 Aminotransferase class-V YIM_16355 PF01565 FAD binding domain YIM_16355 PF02913 FAD linked oxidases, C-terminal domain YIM_16355 PF13183 4Fe-4S dicluster domain YIM_16360 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_16365 PF01261 Xylose isomerase-like TIM barrel YIM_16370 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_16370 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_16375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_16375 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_16375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_16380 PF02595 Glycerate kinase family YIM_16405 PF00583 Acetyltransferase (GNAT) family YIM_16420 PF12697 Alpha/beta hydrolase family YIM_16425 PF00376 MerR family regulatory protein YIM_16425 PF09278 MerR, DNA binding YIM_16430 PF00248 Aldo/keto reductase family YIM_16435 PF00561 alpha/beta hydrolase fold YIM_16445 PF03466 LysR substrate binding domain YIM_16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_16450 PF00248 Aldo/keto reductase family YIM_16460 PF01625 Peptide methionine sulfoxide reductase YIM_16465 PF01494 FAD binding domain YIM_16495 PF00892 EamA-like transporter family YIM_16510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_16510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_16515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_16520 PF00528 Binding-protein-dependent transport system inner membrane component YIM_16530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_16530 PF00005 ABC transporter YIM_16535 PF00005 ABC transporter YIM_16535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_16545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_16545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_16550 PF13378 Enolase C-terminal domain-like YIM_16550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_16555 PF01614 Bacterial transcriptional regulator YIM_16555 PF09339 IclR helix-turn-helix domain YIM_16560 PF00204 DNA gyrase B YIM_16560 PF01751 Toprim domain YIM_16560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_16560 PF00986 DNA gyrase B subunit, carboxyl terminus YIM_16570 PF00378 Enoyl-CoA hydratase/isomerase YIM_16575 PF00486 Transcriptional regulatory protein, C terminal YIM_16575 PF03704 Bacterial transcriptional activator domain YIM_16575 PF00931 NB-ARC domain YIM_16590 PF07730 Histidine kinase YIM_16590 PF13185 GAF domain YIM_16605 PF00144 Beta-lactamase YIM_16610 PF00486 Transcriptional regulatory protein, C terminal YIM_16610 PF03704 Bacterial transcriptional activator domain YIM_16610 PF00931 NB-ARC domain YIM_16615 PF03704 Bacterial transcriptional activator domain YIM_16615 PF00486 Transcriptional regulatory protein, C terminal YIM_16615 PF00931 NB-ARC domain YIM_16620 PF07519 Tannase and feruloyl esterase YIM_16630 PF00196 Bacterial regulatory proteins, luxR family YIM_16630 PF00072 Response regulator receiver domain YIM_16635 PF00561 alpha/beta hydrolase fold YIM_16640 PF02566 OsmC-like protein YIM_16645 PF00005 ABC transporter YIM_16650 PF00005 ABC transporter YIM_16655 PF08240 Alcohol dehydrogenase GroES-like domain YIM_16655 PF00107 Zinc-binding dehydrogenase YIM_16660 PF00392 Bacterial regulatory proteins, gntR family YIM_16660 PF07702 UTRA domain YIM_16665 PF09084 NMT1/THI5 like YIM_16670 PF00005 ABC transporter YIM_16675 PF00528 Binding-protein-dependent transport system inner membrane component YIM_16680 PF13419 Haloacid dehalogenase-like hydrolase YIM_16685 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_16685 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_16690 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_16690 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_16695 PF01799 [2Fe-2S] binding domain YIM_16695 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_16695 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_16700 PF00440 Bacterial regulatory proteins, tetR family YIM_16700 PF17925 Tetracyclin repressor-like, C-terminal domain YIM_16710 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_16710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_16710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_16715 PF02515 CoA-transferase family III YIM_16720 PF00202 Aminotransferase class-III YIM_16730 PF01179 Copper amine oxidase, enzyme domain YIM_16730 PF02728 Copper amine oxidase, N3 domain YIM_16735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_16740 PF00528 Binding-protein-dependent transport system inner membrane component YIM_16745 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_16745 PF00528 Binding-protein-dependent transport system inner membrane component YIM_16750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_16750 PF00005 ABC transporter YIM_16755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_16755 PF00005 ABC transporter YIM_16770 PF00171 Aldehyde dehydrogenase family YIM_16775 PF00356 Bacterial regulatory proteins, lacI family YIM_16775 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YIM_16780 PF07690 Major Facilitator Superfamily YIM_16800 PF09423 PhoD-like phosphatase YIM_16800 PF16655 PhoD-like phosphatase, N-terminal domain YIM_16840 PF02780 Transketolase, C-terminal domain YIM_16840 PF02779 Transketolase, pyrimidine binding domain YIM_16845 PF00676 Dehydrogenase E1 component YIM_16870 PF00171 Aldehyde dehydrogenase family YIM_16880 PF00392 Bacterial regulatory proteins, gntR family YIM_16880 PF07702 UTRA domain YIM_16920 PF00196 Bacterial regulatory proteins, luxR family YIM_16920 PF00072 Response regulator receiver domain YIM_16930 PF00005 ABC transporter YIM_16930 PF02687 FtsX-like permease family YIM_16930 PF12704 MacB-like periplasmic core domain YIM_16935 PF02687 FtsX-like permease family YIM_16935 PF12704 MacB-like periplasmic core domain YIM_16950 PF01227 GTP cyclohydrolase I YIM_16960 PF00005 ABC transporter YIM_16965 PF00950 ABC 3 transport family YIM_16975 PF01297 Zinc-uptake complex component A periplasmic YIM_17000 PF13649 Methyltransferase domain YIM_17005 PF00440 Bacterial regulatory proteins, tetR family YIM_17025 PF13360 PQQ-like domain YIM_17025 PF00069 Protein kinase domain YIM_17080 PF01566 Natural resistance-associated macrophage protein YIM_17085 PF13378 Enolase C-terminal domain-like YIM_17085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_17090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_17090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_17090 PF01842 ACT domain YIM_17100 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_17105 PF00248 Aldo/keto reductase family YIM_17110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_17110 PF00005 ABC transporter YIM_17115 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_17115 PF00005 ABC transporter YIM_17125 PF00528 Binding-protein-dependent transport system inner membrane component YIM_17130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_17135 PF04166 Pyridoxal phosphate biosynthetic protein PdxA YIM_17140 PF00455 DeoR C terminal sensor domain YIM_17140 PF08220 DeoR-like helix-turn-helix domain YIM_17155 PF00404 Dockerin type I domain YIM_17155 PF00657 GDSL-like Lipase/Acylhydrolase YIM_17160 PF00005 ABC transporter YIM_17170 PF01032 FecCD transport family YIM_17185 PF00067 Cytochrome P450 YIM_17190 PF02195 ParB-like nuclease domain YIM_17195 PF13193 AMP-binding enzyme C-terminal domain YIM_17195 PF00550 Phosphopantetheine attachment site YIM_17195 PF00501 AMP-binding enzyme YIM_17195 PF00668 Condensation domain YIM_17200 PF00550 Phosphopantetheine attachment site YIM_17200 PF00668 Condensation domain YIM_17200 PF13193 AMP-binding enzyme C-terminal domain YIM_17200 PF00501 AMP-binding enzyme YIM_17200 PF00975 Thioesterase domain YIM_17205 PF00550 Phosphopantetheine attachment site YIM_17205 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_17205 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_17205 PF16197 Ketoacyl-synthetase C-terminal extension YIM_17205 PF00668 Condensation domain YIM_17205 PF00698 Acyl transferase domain YIM_17210 PF00296 Luciferase-like monooxygenase YIM_17215 PF13193 AMP-binding enzyme C-terminal domain YIM_17215 PF00501 AMP-binding enzyme YIM_17215 PF00668 Condensation domain YIM_17215 PF00550 Phosphopantetheine attachment site YIM_17225 PF07993 Male sterility protein YIM_17225 PF00501 AMP-binding enzyme YIM_17225 PF13193 AMP-binding enzyme C-terminal domain YIM_17225 PF00668 Condensation domain YIM_17225 PF00550 Phosphopantetheine attachment site YIM_17240 PF03621 MbtH-like protein YIM_17255 PF00326 Prolyl oligopeptidase family YIM_17255 PF07676 WD40-like Beta Propeller Repeat YIM_17260 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_17265 PF01425 Amidase YIM_17280 PF00561 alpha/beta hydrolase fold YIM_17285 PF00440 Bacterial regulatory proteins, tetR family YIM_17285 PF13977 BetI-type transcriptional repressor, C-terminal YIM_17290 PF08240 Alcohol dehydrogenase GroES-like domain YIM_17290 PF00107 Zinc-binding dehydrogenase YIM_17290 PF16197 Ketoacyl-synthetase C-terminal extension YIM_17290 PF00550 Phosphopantetheine attachment site YIM_17290 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_17290 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_17290 PF14765 Polyketide synthase dehydratase YIM_17290 PF00698 Acyl transferase domain YIM_17290 PF08659 KR domain YIM_17300 PF00893 Small Multidrug Resistance protein YIM_17305 PF02397 Bacterial sugar transferase YIM_17310 PF00881 Nitroreductase family YIM_17315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YIM_17315 PF03129 Anticodon binding domain YIM_17315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YIM_17320 PF01230 HIT domain YIM_17340 PF03279 Bacterial lipid A biosynthesis acyltransferase YIM_17345 PF13439 Glycosyltransferase Family 4 YIM_17355 PF00679 Elongation factor G C-terminus YIM_17355 PF03144 Elongation factor Tu domain 2 YIM_17355 PF03764 Elongation factor G, domain IV YIM_17355 PF00009 Elongation factor Tu GTP binding domain YIM_17355 PF14492 Elongation Factor G, domain II YIM_17360 PF01680 SOR/SNZ family YIM_17370 PF01638 HxlR-like helix-turn-helix YIM_17380 PF00925 GTP cyclohydrolase II YIM_17380 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YIM_17410 PF01174 SNO glutamine amidotransferase family YIM_17415 PF01709 Transcriptional regulator YIM_17425 PF02075 Crossover junction endodeoxyribonuclease RuvC YIM_17430 PF07499 RuvA, C-terminal domain YIM_17430 PF01330 RuvA N terminal domain YIM_17435 PF05496 Holliday junction DNA helicase RuvB P-loop domain YIM_17435 PF05491 RuvB C-terminal winged helix domain YIM_17435 PF17864 RuvB AAA lid domain YIM_17440 PF02699 Preprotein translocase subunit YIM_17445 PF07549 SecD/SecF GG Motif YIM_17445 PF02355 Protein export membrane protein YIM_17450 PF02355 Protein export membrane protein YIM_17450 PF07549 SecD/SecF GG Motif YIM_17455 PF00156 Phosphoribosyl transferase domain YIM_17460 PF04607 Region found in RelA / SpoT proteins YIM_17460 PF02824 TGS domain YIM_17460 PF13291 ACT domain YIM_17465 PF00378 Enoyl-CoA hydratase/isomerase YIM_17465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_17465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_17470 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YIM_17475 PF00753 Metallo-beta-lactamase superfamily YIM_17495 PF01614 Bacterial transcriptional regulator YIM_17495 PF09339 IclR helix-turn-helix domain YIM_17500 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_17505 PF00528 Binding-protein-dependent transport system inner membrane component YIM_17510 PF00528 Binding-protein-dependent transport system inner membrane component YIM_17515 PF00005 ABC transporter YIM_17515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_17520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_17520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_17525 PF02633 Creatinine amidohydrolase YIM_17565 PF13649 Methyltransferase domain YIM_17570 PF04055 Radical SAM superfamily YIM_17575 PF00152 tRNA synthetases class II (D, K and N) YIM_17575 PF01336 OB-fold nucleic acid binding domain YIM_17575 PF02938 GAD domain YIM_17600 PF01494 FAD binding domain YIM_17610 PF16193 AAA C-terminal domain YIM_17610 PF00004 ATPase family associated with various cellular activities (AAA) YIM_17610 PF12002 MgsA AAA+ ATPase C terminal YIM_17615 PF05506 Domain of unknown function (DUF756) YIM_17615 PF04185 Phosphoesterase family YIM_17620 PF01259 SAICAR synthetase YIM_17640 PF02272 DHHA1 domain YIM_17640 PF01411 tRNA synthetases class II (A) YIM_17640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YIM_17645 PF03652 Holliday junction resolvase YIM_17650 PF02618 YceG-like family YIM_17655 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YIM_17655 PF08501 Shikimate dehydrogenase substrate binding domain YIM_17655 PF01488 Shikimate / quinate 5-dehydrogenase YIM_17660 PF04229 GrpB protein YIM_17670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_17670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_17670 PF01842 ACT domain YIM_17685 PF00067 Cytochrome P450 YIM_17690 PF00975 Thioesterase domain YIM_17695 PF13193 AMP-binding enzyme C-terminal domain YIM_17695 PF00550 Phosphopantetheine attachment site YIM_17695 PF00668 Condensation domain YIM_17695 PF00501 AMP-binding enzyme YIM_17705 PF00067 Cytochrome P450 YIM_17715 PF00381 PTS HPr component phosphorylation site YIM_17720 PF00367 phosphotransferase system, EIIB YIM_17720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YIM_17720 PF02378 Phosphotransferase system, EIIC YIM_17730 PF00367 phosphotransferase system, EIIB YIM_17730 PF02378 Phosphotransferase system, EIIC YIM_17735 PF00367 phosphotransferase system, EIIB YIM_17735 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YIM_17735 PF02378 Phosphotransferase system, EIIC YIM_17750 PF04545 Sigma-70, region 4 YIM_17750 PF04542 Sigma-70 region 2 YIM_17765 PF01264 Chorismate synthase YIM_17770 PF01202 Shikimate kinase YIM_17775 PF01761 3-dehydroquinate synthase YIM_17780 PF01220 Dehydroquinase class II YIM_17800 PF01321 Creatinase/Prolidase N-terminal domain YIM_17800 PF00557 Metallopeptidase family M24 YIM_17805 PF09285 Elongation factor P, C-terminal YIM_17805 PF01132 Elongation factor P (EF-P) OB domain YIM_17805 PF08207 Elongation factor P (EF-P) KOW-like domain YIM_17810 PF01029 NusB family YIM_17820 PF00156 Phosphoribosyl transferase domain YIM_17825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_17825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_17830 PF01979 Amidohydrolase family YIM_17840 PF00117 Glutamine amidotransferase class-I YIM_17840 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain YIM_17845 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YIM_17845 PF02142 MGS-like domain YIM_17845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_17850 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family YIM_17860 PF00625 Guanylate kinase YIM_17865 PF01192 RNA polymerase Rpb6 YIM_17870 PF04127 DNA / pantothenate metabolism flavoprotein YIM_17870 PF02441 Flavoprotein YIM_17875 PF02773 S-adenosylmethionine synthetase, C-terminal domain YIM_17875 PF02772 S-adenosylmethionine synthetase, central domain YIM_17875 PF00438 S-adenosylmethionine synthetase, N-terminal domain YIM_17880 PF17764 3′ DNA-binding domain (3′BD) YIM_17885 PF07729 FCD domain YIM_17885 PF00392 Bacterial regulatory proteins, gntR family YIM_17890 PF00585 C-terminal regulatory domain of Threonine dehydratase YIM_17890 PF00291 Pyridoxal-phosphate dependent enzyme YIM_17900 PF00551 Formyl transferase YIM_17900 PF02911 Formyl transferase, C-terminal domain YIM_17905 PF01189 16S rRNA methyltransferase RsmB/F YIM_17905 PF01029 NusB family YIM_17910 PF02441 Flavoprotein YIM_17910 PF04127 DNA / pantothenate metabolism flavoprotein YIM_17915 PF08240 Alcohol dehydrogenase GroES-like domain YIM_17915 PF00107 Zinc-binding dehydrogenase YIM_17920 PF00834 Ribulose-phosphate 3 epimerase family YIM_17925 PF00677 Lumazine binding domain YIM_17930 PF00925 GTP cyclohydrolase II YIM_17930 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YIM_17935 PF00885 6,7-dimethyl-8-ribityllumazine synthase YIM_17940 PF10756 Bacterial PH domain YIM_17955 PF02151 UvrB/uvrC motif YIM_17955 PF08459 UvrC Helix-hairpin-helix N-terminal YIM_17955 PF01541 GIY-YIG catalytic domain YIM_17960 PF03668 P-loop ATPase protein family YIM_17965 PF01933 Uncharacterised protein family UPF0052 YIM_17970 PF14527 WhiA LAGLIDADG-like domain YIM_17970 PF02650 WhiA C-terminal HTH domain YIM_17970 PF10298 WhiA N-terminal LAGLIDADG-like domain YIM_17975 PF00041 Fibronectin type III domain YIM_17975 PF00704 Glycosyl hydrolases family 18 YIM_18015 PF01810 LysE type translocator YIM_18025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YIM_18025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YIM_18030 PF00162 Phosphoglycerate kinase YIM_18035 PF00121 Triosephosphate isomerase YIM_18040 PF03840 Preprotein translocase SecG subunit YIM_18050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_18050 PF07730 Histidine kinase YIM_18050 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term YIM_18050 PF00672 HAMP domain YIM_18055 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YIM_18065 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YIM_18065 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YIM_18070 PF00342 Phosphoglucose isomerase YIM_18075 PF00923 Transaldolase/Fructose-6-phosphate aldolase YIM_18080 PF00456 Transketolase, thiamine diphosphate binding domain YIM_18080 PF02780 Transketolase, C-terminal domain YIM_18080 PF02779 Transketolase, pyrimidine binding domain YIM_18085 PF01040 UbiA prenyltransferase family YIM_18095 PF01638 HxlR-like helix-turn-helix YIM_18100 PF13538 UvrD-like helicase C-terminal domain YIM_18105 PF05697 Bacterial trigger factor protein (TF) YIM_18105 PF05698 Bacterial trigger factor protein (TF) C-terminus YIM_18105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YIM_18110 PF08240 Alcohol dehydrogenase GroES-like domain YIM_18110 PF00107 Zinc-binding dehydrogenase YIM_18135 PF00005 ABC transporter YIM_18135 PF13732 Domain of unknown function (DUF4162) YIM_18150 PF01458 Uncharacterized protein family (UPF0051) YIM_18155 PF01458 Uncharacterized protein family (UPF0051) YIM_18160 PF00005 ABC transporter YIM_18165 PF00266 Aminotransferase class-V YIM_18170 PF01592 NifU-like N terminal domain YIM_18175 PF01883 Iron-sulfur cluster assembly protein YIM_18180 PF06418 CTP synthase N-terminus YIM_18180 PF00117 Glutamine amidotransferase class-I YIM_18185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_18185 PF03466 LysR substrate binding domain YIM_18190 PF03109 ABC1 family YIM_18195 PF07730 Histidine kinase YIM_18200 PF00196 Bacterial regulatory proteins, luxR family YIM_18200 PF00072 Response regulator receiver domain YIM_18240 PF17151 Periplasmic sensor domain YIM_18240 PF00990 Diguanylate cyclase, GGDEF domain YIM_18250 PF01966 HD domain YIM_18250 PF13286 Phosphohydrolase-associated domain YIM_18260 PF00005 ABC transporter YIM_18260 PF16326 ABC transporter C-terminal domain YIM_18260 PF12848 ABC transporter YIM_18275 PF00005 ABC transporter YIM_18275 PF00664 ABC transporter transmembrane region YIM_18280 PF13580 SIS domain YIM_18285 PF12697 Alpha/beta hydrolase family YIM_18295 PF03816 Cell envelope-related transcriptional attenuator domain YIM_18300 PF00578 AhpC/TSA family YIM_18305 PF00563 EAL domain YIM_18305 PF00990 Diguanylate cyclase, GGDEF domain YIM_18305 PF13426 PAS domain YIM_18310 PF00067 Cytochrome P450 YIM_18315 PF08267 Cobalamin-independent synthase, N-terminal domain YIM_18315 PF01717 Cobalamin-independent synthase, Catalytic domain YIM_18320 PF00268 Ribonucleotide reductase, small chain YIM_18325 PF00317 Ribonucleotide reductase, all-alpha domain YIM_18325 PF02867 Ribonucleotide reductase, barrel domain YIM_18325 PF03477 ATP cone domain YIM_18335 PF00378 Enoyl-CoA hydratase/isomerase YIM_18340 PF07859 alpha/beta hydrolase fold YIM_18345 PF08608 Wyosine base formation YIM_18345 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain YIM_18355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_18355 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_18355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_18360 PF01039 Carboxyl transferase domain YIM_18365 PF00364 Biotin-requiring enzyme YIM_18365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_18365 PF00289 Biotin carboxylase, N-terminal domain YIM_18365 PF02785 Biotin carboxylase C-terminal domain YIM_18370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_18370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_18370 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_18380 PF00440 Bacterial regulatory proteins, tetR family YIM_18380 PF08361 MAATS-type transcriptional repressor, C-terminal region YIM_18390 PF00990 Diguanylate cyclase, GGDEF domain YIM_18390 PF17151 Periplasmic sensor domain YIM_18395 PF03171 2OG-Fe(II) oxygenase superfamily YIM_18395 PF14226 non-haem dioxygenase in morphine synthesis N-terminal YIM_18405 PF06441 Epoxide hydrolase N terminus YIM_18415 PF00440 Bacterial regulatory proteins, tetR family YIM_18430 PF01039 Carboxyl transferase domain YIM_18435 PF00730 HhH-GPD superfamily base excision DNA repair protein YIM_18435 PF12833 Helix-turn-helix domain YIM_18435 PF02805 Metal binding domain of Ada YIM_18435 PF06029 AlkA N-terminal domain YIM_18440 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YIM_18440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YIM_18445 PF00378 Enoyl-CoA hydratase/isomerase YIM_18450 PF00501 AMP-binding enzyme YIM_18450 PF13193 AMP-binding enzyme C-terminal domain YIM_18455 PF00440 Bacterial regulatory proteins, tetR family YIM_18465 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_18465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_18465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_18470 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_18470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_18470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_18475 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_18475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_18475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_18480 PF01636 Phosphotransferase enzyme family YIM_18500 PF07729 FCD domain YIM_18500 PF00392 Bacterial regulatory proteins, gntR family YIM_18505 PF00196 Bacterial regulatory proteins, luxR family YIM_18505 PF00072 Response regulator receiver domain YIM_18510 PF00931 NB-ARC domain YIM_18510 PF00486 Transcriptional regulatory protein, C terminal YIM_18510 PF03704 Bacterial transcriptional activator domain YIM_18520 PF03621 MbtH-like protein YIM_18525 PF03364 Polyketide cyclase / dehydrase and lipid transport YIM_18560 PF01895 PhoU domain YIM_18565 PF01928 CYTH domain YIM_18565 PF05235 CHAD domain YIM_18570 PF00072 Response regulator receiver domain YIM_18570 PF00196 Bacterial regulatory proteins, luxR family YIM_18580 PF00672 HAMP domain YIM_18580 PF16448 LapD/MoxY periplasmic domain YIM_18580 PF07730 Histidine kinase YIM_18585 PF00072 Response regulator receiver domain YIM_18585 PF00196 Bacterial regulatory proteins, luxR family YIM_18600 PF01975 Survival protein SurE YIM_18620 PF18844 Bacterial archaeo-eukaryotic release factor family 2 YIM_18630 PF00849 RNA pseudouridylate synthase YIM_18645 PF13193 AMP-binding enzyme C-terminal domain YIM_18645 PF00501 AMP-binding enzyme YIM_18655 PF08220 DeoR-like helix-turn-helix domain YIM_18655 PF00455 DeoR C terminal sensor domain YIM_18660 PF10566 Glycoside hydrolase 97 YIM_18660 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation YIM_18660 PF14508 Glycosyl-hydrolase 97 N-terminal YIM_18665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YIM_18665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_18670 PF00596 Class II Aldolase and Adducin N-terminal domain YIM_18675 PF00356 Bacterial regulatory proteins, lacI family YIM_18715 PF08713 DNA alkylation repair enzyme YIM_18735 PF05726 Pirin C-terminal cupin domain YIM_18735 PF02678 Pirin YIM_18740 PF01039 Carboxyl transferase domain YIM_18745 PF00196 Bacterial regulatory proteins, luxR family YIM_18765 PF00067 Cytochrome P450 YIM_18775 PF01300 Telomere recombination YIM_18795 PF07690 Major Facilitator Superfamily YIM_18800 PF13191 AAA ATPase domain YIM_18800 PF00069 Protein kinase domain YIM_18815 PF01594 AI-2E family transporter YIM_18825 PF01321 Creatinase/Prolidase N-terminal domain YIM_18825 PF00557 Metallopeptidase family M24 YIM_18835 PF13520 Amino acid permease YIM_18850 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) YIM_18855 PF00440 Bacterial regulatory proteins, tetR family YIM_18885 PF00005 ABC transporter YIM_18895 PF00072 Response regulator receiver domain YIM_18895 PF00196 Bacterial regulatory proteins, luxR family YIM_18900 PF02467 Transcription factor WhiB YIM_18910 PF01979 Amidohydrolase family YIM_18920 PF02898 Nitric oxide synthase, oxygenase domain YIM_18940 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_18945 PF07690 Major Facilitator Superfamily YIM_18950 PF00795 Carbon-nitrogen hydrolase YIM_18965 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YIM_18965 PF00072 Response regulator receiver domain YIM_18965 PF01627 Hpt domain YIM_18965 PF00512 His Kinase A (phospho-acceptor) domain YIM_18965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_18965 PF00672 HAMP domain YIM_18970 PF01740 STAS domain YIM_18995 PF00549 CoA-ligase YIM_18995 PF08442 ATP-grasp domain YIM_19000 PF02629 CoA binding domain YIM_19000 PF00549 CoA-ligase YIM_19005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_19005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_19010 PF02634 FdhD/NarQ family YIM_19015 PF08546 Ketopantoate reductase PanE/ApbA C terminal YIM_19015 PF02558 Ketopantoate reductase PanE/ApbA YIM_19025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_19025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_19025 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_19030 PF02515 CoA-transferase family III YIM_19035 PF00583 Acetyltransferase (GNAT) family YIM_19035 PF13607 Succinyl-CoA ligase like flavodoxin domain YIM_19035 PF13380 CoA binding domain YIM_19050 PF03741 Integral membrane protein TerC family YIM_19060 PF07729 FCD domain YIM_19060 PF00392 Bacterial regulatory proteins, gntR family YIM_19085 PF12838 4Fe-4S dicluster domain YIM_19085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YIM_19085 PF00384 Molybdopterin oxidoreductase YIM_19085 PF01568 Molydopterin dinucleotide binding domain YIM_19085 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YIM_19090 PF00037 4Fe-4S binding domain YIM_19090 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YIM_19090 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YIM_19100 PF01810 LysE type translocator YIM_19130 PF00474 Sodium:solute symporter family YIM_19135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_19135 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_19135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_19140 PF09339 IclR helix-turn-helix domain YIM_19140 PF01614 Bacterial transcriptional regulator YIM_19145 PF00171 Aldehyde dehydrogenase family YIM_19170 PF13409 Glutathione S-transferase, N-terminal domain YIM_19175 PF10706 Aminoglycoside-2''-adenylyltransferase YIM_19180 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YIM_19190 PF07859 alpha/beta hydrolase fold YIM_19200 PF00296 Luciferase-like monooxygenase YIM_19205 PF01565 FAD binding domain YIM_19205 PF02913 FAD linked oxidases, C-terminal domain YIM_19210 PF00440 Bacterial regulatory proteins, tetR family YIM_19215 PF00067 Cytochrome P450 YIM_19235 PF02595 Glycerate kinase family YIM_19240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_19240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_19240 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_19245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_19245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_19250 PF01261 Xylose isomerase-like TIM barrel YIM_19260 PF00860 Permease family YIM_19265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YIM_19270 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_19270 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_19275 PF01799 [2Fe-2S] binding domain YIM_19275 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_19280 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_19280 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_19285 PF01014 Uricase YIM_19290 PF17853 GGDEF-like domain YIM_19290 PF13556 PucR C-terminal helix-turn-helix domain YIM_19290 PF05651 Putative sugar diacid recognition YIM_19305 PF08362 YcdC-like protein, C-terminal region YIM_19305 PF00440 Bacterial regulatory proteins, tetR family YIM_19315 PF00196 Bacterial regulatory proteins, luxR family YIM_19320 PF00753 Metallo-beta-lactamase superfamily YIM_19320 PF10996 Beta-Casp domain YIM_19320 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain YIM_19325 PF00135 Carboxylesterase family YIM_19340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_19340 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_19340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_19345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_19345 PF03466 LysR substrate binding domain YIM_19350 PF13183 4Fe-4S dicluster domain YIM_19350 PF13085 2Fe-2S iron-sulfur cluster binding domain YIM_19355 PF00890 FAD binding domain YIM_19355 PF02910 Fumarate reductase flavoprotein C-term YIM_19365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_19365 PF03466 LysR substrate binding domain YIM_19375 PF02574 Homocysteine S-methyltransferase YIM_19380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_19380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_19385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_19385 PF03466 LysR substrate binding domain YIM_19395 PF01965 DJ-1/PfpI family YIM_19400 PF00296 Luciferase-like monooxygenase YIM_19440 PF00005 ABC transporter YIM_19450 PF04542 Sigma-70 region 2 YIM_19450 PF08281 Sigma-70, region 4 YIM_19460 PF00072 Response regulator receiver domain YIM_19460 PF00990 Diguanylate cyclase, GGDEF domain YIM_19475 PF01047 MarR family YIM_19500 PF03055 Retinal pigment epithelial membrane protein YIM_19525 PF07690 Major Facilitator Superfamily YIM_19545 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YIM_19545 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YIM_19550 PF00355 Rieske [2Fe-2S] domain YIM_19565 PF04545 Sigma-70, region 4 YIM_19565 PF04539 Sigma-70 region 3 YIM_19565 PF04542 Sigma-70 region 2 YIM_19575 PF02541 Ppx/GppA phosphatase family YIM_19580 PF00156 Phosphoribosyl transferase domain YIM_19580 PF05139 Erythromycin esterase YIM_19585 PF03073 TspO/MBR family YIM_19595 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_19595 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_19600 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_19600 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_19605 PF01799 [2Fe-2S] binding domain YIM_19605 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_19605 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_19610 PF01965 DJ-1/PfpI family YIM_19625 PF13462 Thioredoxin YIM_19625 PF06965 Na+/H+ antiporter 1 YIM_19640 PF00296 Luciferase-like monooxygenase YIM_19655 PF00392 Bacterial regulatory proteins, gntR family YIM_19655 PF07729 FCD domain YIM_19660 PF00528 Binding-protein-dependent transport system inner membrane component YIM_19665 PF00528 Binding-protein-dependent transport system inner membrane component YIM_19690 PF07690 Major Facilitator Superfamily YIM_19695 PF00356 Bacterial regulatory proteins, lacI family YIM_19700 PF00553 Cellulose binding domain YIM_19700 PF00331 Glycosyl hydrolase family 10 YIM_19705 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_19705 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_19705 PF14310 Fibronectin type III-like domain YIM_19710 PF00356 Bacterial regulatory proteins, lacI family YIM_19720 PF00528 Binding-protein-dependent transport system inner membrane component YIM_19725 PF00528 Binding-protein-dependent transport system inner membrane component YIM_19745 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain YIM_19745 PF04616 Glycosyl hydrolases family 43 YIM_19755 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase YIM_19760 PF01022 Bacterial regulatory protein, arsR family YIM_19765 PF07690 Major Facilitator Superfamily YIM_19770 PF02013 Cellulose or protein binding domain YIM_19770 PF00150 Cellulase (glycosyl hydrolase family 5) YIM_19775 PF00553 Cellulose binding domain YIM_19775 PF00041 Fibronectin type III domain YIM_19775 PF02011 Glycosyl hydrolase family 48 YIM_19780 PF00759 Glycosyl hydrolase family 9 YIM_19780 PF00041 Fibronectin type III domain YIM_19780 PF00942 Cellulose binding domain YIM_19780 PF00553 Cellulose binding domain YIM_19790 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YIM_19790 PF00553 Cellulose binding domain YIM_19795 PF02018 Carbohydrate binding domain YIM_19795 PF00759 Glycosyl hydrolase family 9 YIM_19795 PF02927 Cellulase N-terminal ig-like domain YIM_19800 PF17912 MalK OB fold domain YIM_19800 PF00005 ABC transporter YIM_19805 PF00232 Glycosyl hydrolase family 1 YIM_19810 PF00528 Binding-protein-dependent transport system inner membrane component YIM_19815 PF00528 Binding-protein-dependent transport system inner membrane component YIM_19825 PF00356 Bacterial regulatory proteins, lacI family YIM_19830 PF01341 Glycosyl hydrolases family 6 YIM_19830 PF00553 Cellulose binding domain YIM_19835 PF01341 Glycosyl hydrolases family 6 YIM_19835 PF00553 Cellulose binding domain YIM_19835 PF00041 Fibronectin type III domain YIM_19840 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YIM_19840 PF18416 N-acetylglucosamine binding protein domain 2 YIM_19845 PF00857 Isochorismatase family YIM_19855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_19855 PF03466 LysR substrate binding domain YIM_19860 PF00232 Glycosyl hydrolase family 1 YIM_19865 PF00356 Bacterial regulatory proteins, lacI family YIM_19870 PF00041 Fibronectin type III domain YIM_19870 PF00150 Cellulase (glycosyl hydrolase family 5) YIM_19870 PF00553 Cellulose binding domain YIM_19875 PF03442 Carbohydrate binding domain X2 YIM_19875 PF00942 Cellulose binding domain YIM_19895 PF00356 Bacterial regulatory proteins, lacI family YIM_19910 PF12802 MarR family YIM_19915 PF12680 SnoaL-like domain YIM_19915 PF04542 Sigma-70 region 2 YIM_19915 PF08281 Sigma-70, region 4 YIM_19925 PF00440 Bacterial regulatory proteins, tetR family YIM_19960 PF02447 GntP family permease YIM_19970 PF03466 LysR substrate binding domain YIM_19970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_19975 PF00083 Sugar (and other) transporter YIM_19990 PF07690 Major Facilitator Superfamily YIM_19990 PF00083 Sugar (and other) transporter YIM_19995 PF00501 AMP-binding enzyme YIM_19995 PF13193 AMP-binding enzyme C-terminal domain YIM_20015 PF00356 Bacterial regulatory proteins, lacI family YIM_20020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_20020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_20025 PF13378 Enolase C-terminal domain-like YIM_20025 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_20030 PF01232 Mannitol dehydrogenase Rossmann domain YIM_20030 PF08125 Mannitol dehydrogenase C-terminal domain YIM_20035 PF08240 Alcohol dehydrogenase GroES-like domain YIM_20035 PF00107 Zinc-binding dehydrogenase YIM_20040 PF00083 Sugar (and other) transporter YIM_20040 PF07690 Major Facilitator Superfamily YIM_20045 PF00294 pfkB family carbohydrate kinase YIM_20055 PF00356 Bacterial regulatory proteins, lacI family YIM_20065 PF00528 Binding-protein-dependent transport system inner membrane component YIM_20070 PF00528 Binding-protein-dependent transport system inner membrane component YIM_20085 PF00083 Sugar (and other) transporter YIM_20085 PF07690 Major Facilitator Superfamily YIM_20095 PF08501 Shikimate dehydrogenase substrate binding domain YIM_20095 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YIM_20125 PF07690 Major Facilitator Superfamily YIM_20130 PF00664 ABC transporter transmembrane region YIM_20130 PF00005 ABC transporter YIM_20135 PF00005 ABC transporter YIM_20135 PF00664 ABC transporter transmembrane region YIM_20145 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_20150 PF13556 PucR C-terminal helix-turn-helix domain YIM_20150 PF17853 GGDEF-like domain YIM_20155 PF00293 NUDIX domain YIM_20165 PF00067 Cytochrome P450 YIM_20170 PF00067 Cytochrome P450 YIM_20195 PF00296 Luciferase-like monooxygenase YIM_20200 PF04075 F420H(2)-dependent quinone reductase YIM_20205 PF12833 Helix-turn-helix domain YIM_20205 PF12852 Cupin YIM_20220 PF04542 Sigma-70 region 2 YIM_20220 PF08281 Sigma-70, region 4 YIM_20220 PF12680 SnoaL-like domain YIM_20230 PF03466 LysR substrate binding domain YIM_20230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_20280 PF13088 BNR repeat-like domain YIM_20280 PF02973 Sialidase, N-terminal domain YIM_20280 PF04650 YSIRK type signal peptide YIM_20285 PF08532 Beta-galactosidase trimerisation domain YIM_20285 PF08533 Beta-galactosidase C-terminal domain YIM_20285 PF02449 Beta-galactosidase YIM_20290 PF00701 Dihydrodipicolinate synthetase family YIM_20295 PF00005 ABC transporter YIM_20295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_20300 PF00005 ABC transporter YIM_20300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_20305 PF00528 Binding-protein-dependent transport system inner membrane component YIM_20310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_20315 PF00392 Bacterial regulatory proteins, gntR family YIM_20315 PF07729 FCD domain YIM_20340 PF03466 LysR substrate binding domain YIM_20340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_20350 PF04231 Endonuclease I YIM_20355 PF00963 Cohesin domain YIM_20355 PF00754 F5/8 type C domain YIM_20355 PF07555 beta-N-acetylglucosaminidase YIM_20355 PF00041 Fibronectin type III domain YIM_20355 PF02838 Glycosyl hydrolase family 20, domain 2 YIM_20375 PF04542 Sigma-70 region 2 YIM_20375 PF12680 SnoaL-like domain YIM_20375 PF08281 Sigma-70, region 4 YIM_20395 PF03780 Asp23 family, cell envelope-related function YIM_20400 PF01209 ubiE/COQ5 methyltransferase family YIM_20410 PF05139 Erythromycin esterase YIM_20430 PF03471 Transporter associated domain YIM_20430 PF01595 Cyclin M transmembrane N-terminal domain YIM_20430 PF00571 CBS domain YIM_20435 PF03471 Transporter associated domain YIM_20435 PF01595 Cyclin M transmembrane N-terminal domain YIM_20435 PF00571 CBS domain YIM_20445 PF04616 Glycosyl hydrolases family 43 YIM_20485 PF00067 Cytochrome P450 YIM_20495 PF00196 Bacterial regulatory proteins, luxR family YIM_20500 PF00842 Alanine racemase, C-terminal domain YIM_20500 PF01168 Alanine racemase, N-terminal domain YIM_20505 PF00464 Serine hydroxymethyltransferase YIM_20510 PF00668 Condensation domain YIM_20510 PF13193 AMP-binding enzyme C-terminal domain YIM_20510 PF00975 Thioesterase domain YIM_20510 PF00550 Phosphopantetheine attachment site YIM_20510 PF00501 AMP-binding enzyme YIM_20515 PF08242 Methyltransferase domain YIM_20515 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_20515 PF00975 Thioesterase domain YIM_20515 PF16197 Ketoacyl-synthetase C-terminal extension YIM_20515 PF14765 Polyketide synthase dehydratase YIM_20515 PF00550 Phosphopantetheine attachment site YIM_20515 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_20520 PF13193 AMP-binding enzyme C-terminal domain YIM_20520 PF00975 Thioesterase domain YIM_20520 PF00550 Phosphopantetheine attachment site YIM_20520 PF00501 AMP-binding enzyme YIM_20520 PF00668 Condensation domain YIM_20530 PF00465 Iron-containing alcohol dehydrogenase YIM_20535 PF02779 Transketolase, pyrimidine binding domain YIM_20535 PF02780 Transketolase, C-terminal domain YIM_20540 PF00465 Iron-containing alcohol dehydrogenase YIM_20550 PF02780 Transketolase, C-terminal domain YIM_20550 PF02779 Transketolase, pyrimidine binding domain YIM_20555 PF00456 Transketolase, thiamine diphosphate binding domain YIM_20560 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_20565 PF01321 Creatinase/Prolidase N-terminal domain YIM_20565 PF00557 Metallopeptidase family M24 YIM_20570 PF00171 Aldehyde dehydrogenase family YIM_20585 PF03466 LysR substrate binding domain YIM_20585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_20590 PF13193 AMP-binding enzyme C-terminal domain YIM_20590 PF00975 Thioesterase domain YIM_20590 PF00550 Phosphopantetheine attachment site YIM_20590 PF00501 AMP-binding enzyme YIM_20590 PF00668 Condensation domain YIM_20615 PF01022 Bacterial regulatory protein, arsR family YIM_20620 PF13411 MerR HTH family regulatory protein YIM_20620 PF13152 Protein of unknown function (DUF3967) YIM_20625 PF00106 short chain dehydrogenase YIM_20630 PF00440 Bacterial regulatory proteins, tetR family YIM_20635 PF00893 Small Multidrug Resistance protein YIM_20640 PF00893 Small Multidrug Resistance protein YIM_20645 PF13404 AsnC-type helix-turn-helix domain YIM_20645 PF01037 Lrp/AsnC ligand binding domain YIM_20650 PF03806 AbgT putative transporter family YIM_20665 PF00857 Isochorismatase family YIM_20675 PF00356 Bacterial regulatory proteins, lacI family YIM_20680 PF00528 Binding-protein-dependent transport system inner membrane component YIM_20685 PF00528 Binding-protein-dependent transport system inner membrane component YIM_20690 PF01547 Bacterial extracellular solute-binding protein YIM_20705 PF00294 pfkB family carbohydrate kinase YIM_20715 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_20715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_20725 PF00296 Luciferase-like monooxygenase YIM_20745 PF01266 FAD dependent oxidoreductase YIM_20745 PF08669 Glycine cleavage T-protein C-terminal barrel domain YIM_20745 PF01571 Aminomethyltransferase folate-binding domain YIM_20745 PF16350 FAD dependent oxidoreductase central domain YIM_20755 PF04324 BFD-like [2Fe-2S] binding domain YIM_20755 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_20760 PF00701 Dihydrodipicolinate synthetase family YIM_20765 PF05544 Proline racemase YIM_20775 PF00378 Enoyl-CoA hydratase/isomerase YIM_20780 PF00501 AMP-binding enzyme YIM_20790 PF00248 Aldo/keto reductase family YIM_20795 PF00296 Luciferase-like monooxygenase YIM_20800 PF00486 Transcriptional regulatory protein, C terminal YIM_20800 PF00072 Response regulator receiver domain YIM_20810 PF01565 FAD binding domain YIM_20810 PF08031 Berberine and berberine like YIM_20815 PF07730 Histidine kinase YIM_20815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_20815 PF00672 HAMP domain YIM_20820 PF00072 Response regulator receiver domain YIM_20820 PF00196 Bacterial regulatory proteins, luxR family YIM_20825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_20825 PF03466 LysR substrate binding domain YIM_20830 PF07690 Major Facilitator Superfamily YIM_20840 PF00282 Pyridoxal-dependent decarboxylase conserved domain YIM_20855 PF18370 Rhamnogalacturonan I lyases beta-sheet domain YIM_20860 PF03960 ArsC family YIM_20865 PF00356 Bacterial regulatory proteins, lacI family YIM_20870 PF00356 Bacterial regulatory proteins, lacI family YIM_20885 PF00528 Binding-protein-dependent transport system inner membrane component YIM_20895 PF00440 Bacterial regulatory proteins, tetR family YIM_20895 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_20995 PF04542 Sigma-70 region 2 YIM_20995 PF08281 Sigma-70, region 4 YIM_21010 PF01653 NAD-dependent DNA ligase adenylation domain YIM_21010 PF03120 NAD-dependent DNA ligase OB-fold domain YIM_21010 PF12826 Helix-hairpin-helix motif YIM_21020 PF00561 alpha/beta hydrolase fold YIM_21025 PF00072 Response regulator receiver domain YIM_21025 PF00196 Bacterial regulatory proteins, luxR family YIM_21035 PF00561 alpha/beta hydrolase fold YIM_21060 PF07690 Major Facilitator Superfamily YIM_21070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_21070 PF03466 LysR substrate binding domain YIM_21085 PF00487 Fatty acid desaturase YIM_21090 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_21090 PF00970 Oxidoreductase FAD-binding domain YIM_21090 PF00175 Oxidoreductase NAD-binding domain YIM_21100 PF00072 Response regulator receiver domain YIM_21100 PF00196 Bacterial regulatory proteins, luxR family YIM_21105 PF07729 FCD domain YIM_21105 PF00392 Bacterial regulatory proteins, gntR family YIM_21110 PF00005 ABC transporter YIM_21115 PF00440 Bacterial regulatory proteins, tetR family YIM_21120 PF00561 alpha/beta hydrolase fold YIM_21150 PF00501 AMP-binding enzyme YIM_21150 PF13193 AMP-binding enzyme C-terminal domain YIM_21175 PF00999 Sodium/hydrogen exchanger family YIM_21185 PF01070 FMN-dependent dehydrogenase YIM_21190 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_21195 PF00501 AMP-binding enzyme YIM_21195 PF13193 AMP-binding enzyme C-terminal domain YIM_21205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_21205 PF03466 LysR substrate binding domain YIM_21215 PF07729 FCD domain YIM_21215 PF00392 Bacterial regulatory proteins, gntR family YIM_21260 PF00890 FAD binding domain YIM_21260 PF03358 NADPH-dependent FMN reductase YIM_21260 PF04205 FMN-binding domain YIM_21265 PF07690 Major Facilitator Superfamily YIM_21270 PF11975 Family 4 glycosyl hydrolase C-terminal domain YIM_21270 PF02056 Family 4 glycosyl hydrolase YIM_21275 PF00455 DeoR C terminal sensor domain YIM_21275 PF08220 DeoR-like helix-turn-helix domain YIM_21280 PF00294 pfkB family carbohydrate kinase YIM_21285 PF01547 Bacterial extracellular solute-binding protein YIM_21290 PF00528 Binding-protein-dependent transport system inner membrane component YIM_21295 PF00528 Binding-protein-dependent transport system inner membrane component YIM_21300 PF02585 GlcNAc-PI de-N-acetylase YIM_21310 PF00196 Bacterial regulatory proteins, luxR family YIM_21310 PF00072 Response regulator receiver domain YIM_21320 PF05430 S-adenosyl-L-methionine-dependent methyltransferase YIM_21320 PF01266 FAD dependent oxidoreductase YIM_21325 PF03806 AbgT putative transporter family YIM_21330 PF07228 Stage II sporulation protein E (SpoIIE) YIM_21330 PF00672 HAMP domain YIM_21350 PF17853 GGDEF-like domain YIM_21350 PF13556 PucR C-terminal helix-turn-helix domain YIM_21365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YIM_21365 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_21370 PF00106 short chain dehydrogenase YIM_21375 PF01965 DJ-1/PfpI family YIM_21380 PF12833 Helix-turn-helix domain YIM_21380 PF01965 DJ-1/PfpI family YIM_21390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_21390 PF03466 LysR substrate binding domain YIM_21395 PF00795 Carbon-nitrogen hydrolase YIM_21410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_21410 PF03466 LysR substrate binding domain YIM_21415 PF08402 TOBE domain YIM_21415 PF00005 ABC transporter YIM_21430 PF00528 Binding-protein-dependent transport system inner membrane component YIM_21435 PF00528 Binding-protein-dependent transport system inner membrane component YIM_21440 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_21465 PF00356 Bacterial regulatory proteins, lacI family YIM_21480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_21485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YIM_21485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YIM_21485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YIM_21505 PF00733 Asparagine synthase YIM_21505 PF13537 Glutamine amidotransferase domain YIM_21510 PF00107 Zinc-binding dehydrogenase YIM_21530 PF00534 Glycosyl transferases group 1 YIM_21530 PF13439 Glycosyltransferase Family 4 YIM_21545 PF00202 Aminotransferase class-III YIM_21550 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YIM_21560 PF00535 Glycosyl transferase family 2 YIM_21570 PF09940 Domain of unknown function (DUF2172) YIM_21570 PF16254 Domain of unknown function (DUF4910) YIM_21570 PF16221 winged helix-turn-helix YIM_21575 PF16363 GDP-mannose 4,6 dehydratase YIM_21585 PF00483 Nucleotidyl transferase YIM_21590 PF08484 C-methyltransferase C-terminal domain YIM_21590 PF08421 Putative zinc binding domain YIM_21595 PF00171 Aldehyde dehydrogenase family YIM_21600 PF05199 GMC oxidoreductase YIM_21600 PF00732 GMC oxidoreductase YIM_21605 PF07687 Peptidase dimerisation domain YIM_21605 PF01546 Peptidase family M20/M25/M40 YIM_21635 PF02467 Transcription factor WhiB YIM_21700 PF00140 Sigma-70 factor, region 1.2 YIM_21700 PF04545 Sigma-70, region 4 YIM_21700 PF04542 Sigma-70 region 2 YIM_21700 PF04539 Sigma-70 region 3 YIM_21710 PF00145 C-5 cytosine-specific DNA methylase YIM_21745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_21750 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase YIM_21750 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg YIM_21750 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II YIM_21755 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_21755 PF14759 Reductase C-terminal YIM_21760 PF00067 Cytochrome P450 YIM_21770 PF00561 alpha/beta hydrolase fold YIM_21775 PF00528 Binding-protein-dependent transport system inner membrane component YIM_21780 PF00528 Binding-protein-dependent transport system inner membrane component YIM_21780 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_21785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_21785 PF00005 ABC transporter YIM_21790 PF00005 ABC transporter YIM_21790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_21800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_21800 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_21800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_21805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_21805 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_21805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_21815 PF00378 Enoyl-CoA hydratase/isomerase YIM_21830 PF00106 short chain dehydrogenase YIM_21840 PF00501 AMP-binding enzyme YIM_21840 PF14535 AMP-binding enzyme C-terminal domain YIM_21845 PF13193 AMP-binding enzyme C-terminal domain YIM_21845 PF00501 AMP-binding enzyme YIM_21855 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_21855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_21855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_21875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_21875 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_21875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_21880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_21880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_21880 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_21885 PF00378 Enoyl-CoA hydratase/isomerase YIM_21890 PF02515 CoA-transferase family III YIM_21895 PF13193 AMP-binding enzyme C-terminal domain YIM_21895 PF00501 AMP-binding enzyme YIM_21900 PF00501 AMP-binding enzyme YIM_21900 PF13193 AMP-binding enzyme C-terminal domain YIM_21905 PF05199 GMC oxidoreductase YIM_21905 PF00732 GMC oxidoreductase YIM_21910 PF00171 Aldehyde dehydrogenase family YIM_21915 PF00067 Cytochrome P450 YIM_21925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_21930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_21940 PF00108 Thiolase, N-terminal domain YIM_21940 PF02803 Thiolase, C-terminal domain YIM_21945 PF00248 Aldo/keto reductase family YIM_21950 PF02515 CoA-transferase family III YIM_21955 PF00392 Bacterial regulatory proteins, gntR family YIM_21955 PF07729 FCD domain YIM_21975 PF14759 Reductase C-terminal YIM_21975 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_21985 PF00037 4Fe-4S binding domain YIM_21995 PF00171 Aldehyde dehydrogenase family YIM_22000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_22005 PF01799 [2Fe-2S] binding domain YIM_22005 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_22010 PF00067 Cytochrome P450 YIM_22015 PF00171 Aldehyde dehydrogenase family YIM_22020 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_22020 PF14759 Reductase C-terminal YIM_22030 PF12697 Alpha/beta hydrolase family YIM_22045 PF17934 Tetracyclin repressor-like, C-terminal domain YIM_22045 PF00440 Bacterial regulatory proteins, tetR family YIM_22050 PF07859 alpha/beta hydrolase fold YIM_22060 PF00067 Cytochrome P450 YIM_22070 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_22070 PF14759 Reductase C-terminal YIM_22120 PF00248 Aldo/keto reductase family YIM_22125 PF00753 Metallo-beta-lactamase superfamily YIM_22130 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_22130 PF14759 Reductase C-terminal YIM_22140 PF00067 Cytochrome P450 YIM_22145 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_22145 PF00440 Bacterial regulatory proteins, tetR family YIM_22155 PF00106 short chain dehydrogenase YIM_22160 PF00067 Cytochrome P450 YIM_22165 PF00067 Cytochrome P450 YIM_22175 PF12146 Serine aminopeptidase, S33 YIM_22180 PF00106 short chain dehydrogenase YIM_22185 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YIM_22185 PF12833 Helix-turn-helix domain YIM_22195 PF00378 Enoyl-CoA hydratase/isomerase YIM_22200 PF00171 Aldehyde dehydrogenase family YIM_22205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_22205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_22205 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_22215 PF00378 Enoyl-CoA hydratase/isomerase YIM_22225 PF00195 Chalcone and stilbene synthases, N-terminal domain YIM_22225 PF02797 Chalcone and stilbene synthases, C-terminal domain YIM_22230 PF00582 Universal stress protein family YIM_22235 PF00478 IMP dehydrogenase / GMP reductase domain YIM_22235 PF00571 CBS domain YIM_22240 PF00582 Universal stress protein family YIM_22245 PF09363 XFP C-terminal domain YIM_22245 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase YIM_22245 PF09364 XFP N-terminal domain YIM_22255 PF00871 Acetokinase family YIM_22260 PF00582 Universal stress protein family YIM_22270 PF00690 Cation transporter/ATPase, N-terminus YIM_22270 PF00689 Cation transporting ATPase, C-terminus YIM_22275 PF00072 Response regulator receiver domain YIM_22275 PF00196 Bacterial regulatory proteins, luxR family YIM_22295 PF00582 Universal stress protein family YIM_22300 PF08940 Domain of unknown function (DUF1918) YIM_22310 PF12900 Pyridoxamine 5'-phosphate oxidase YIM_22315 PF07690 Major Facilitator Superfamily YIM_22320 PF00384 Molybdopterin oxidoreductase YIM_22320 PF01568 Molydopterin dinucleotide binding domain YIM_22325 PF14711 Respiratory nitrate reductase beta C-terminal YIM_22325 PF13247 4Fe-4S dicluster domain YIM_22335 PF02665 Nitrate reductase gamma subunit YIM_22335 PF02613 Nitrate reductase delta subunit YIM_22335 PF00384 Molybdopterin oxidoreductase YIM_22350 PF00113 Enolase, C-terminal TIM barrel domain YIM_22350 PF03952 Enolase, N-terminal domain YIM_22375 PF03795 YCII-related domain YIM_22380 PF04542 Sigma-70 region 2 YIM_22380 PF08281 Sigma-70, region 4 YIM_22390 PF07690 Major Facilitator Superfamily YIM_22395 PF00248 Aldo/keto reductase family YIM_22415 PF01494 FAD binding domain YIM_22420 PF17754 MftR C-terminal domain YIM_22420 PF00440 Bacterial regulatory proteins, tetR family YIM_22425 PF00698 Acyl transferase domain YIM_22425 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_22425 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_22425 PF08659 KR domain YIM_22425 PF16197 Ketoacyl-synthetase C-terminal extension YIM_22425 PF08990 Erythronolide synthase docking YIM_22425 PF00550 Phosphopantetheine attachment site YIM_22425 PF14765 Polyketide synthase dehydratase YIM_22425 PF08240 Alcohol dehydrogenase GroES-like domain YIM_22430 PF05690 Thiazole biosynthesis protein ThiG YIM_22430 PF01266 FAD dependent oxidoreductase YIM_22435 PF09278 MerR, DNA binding YIM_22435 PF00376 MerR family regulatory protein YIM_22465 PF00331 Glycosyl hydrolase family 10 YIM_22535 PF07690 Major Facilitator Superfamily YIM_22540 PF00291 Pyridoxal-phosphate dependent enzyme YIM_22555 PF07690 Major Facilitator Superfamily YIM_22570 PF02583 Metal-sensitive transcriptional repressor YIM_22580 PF00403 Heavy-metal-associated domain YIM_22620 PF01799 [2Fe-2S] binding domain YIM_22620 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_22620 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_22625 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_22625 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_22630 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_22630 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_22635 PF00356 Bacterial regulatory proteins, lacI family YIM_22640 PF00528 Binding-protein-dependent transport system inner membrane component YIM_22645 PF00528 Binding-protein-dependent transport system inner membrane component YIM_22655 PF06964 Alpha-L-arabinofuranosidase C-terminal domain YIM_22660 PF01301 Glycosyl hydrolases family 35 YIM_22690 PF03466 LysR substrate binding domain YIM_22690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_22695 PF02515 CoA-transferase family III YIM_22700 PF00378 Enoyl-CoA hydratase/isomerase YIM_22705 PF06314 Acetoacetate decarboxylase (ADC) YIM_22710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_22710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_22715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_22715 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_22715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_22730 PF00483 Nucleotidyl transferase YIM_22750 PF07730 Histidine kinase YIM_22770 PF00221 Aromatic amino acid lyase YIM_22775 PF00664 ABC transporter transmembrane region YIM_22775 PF00005 ABC transporter YIM_22780 PF05711 Macrocin-O-methyltransferase (TylF) YIM_22785 PF06722 Protein of unknown function (DUF1205) YIM_22790 PF06722 Protein of unknown function (DUF1205) YIM_22795 PF00999 Sodium/hydrogen exchanger family YIM_22810 PF08421 Putative zinc binding domain YIM_22810 PF08484 C-methyltransferase C-terminal domain YIM_22815 PF06722 Protein of unknown function (DUF1205) YIM_22825 PF01494 FAD binding domain YIM_22830 PF06722 Protein of unknown function (DUF1205) YIM_22835 PF13649 Methyltransferase domain YIM_22845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_22850 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YIM_22855 PF03559 NDP-hexose 2,3-dehydratase YIM_22860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_22875 PF00291 Pyridoxal-phosphate dependent enzyme YIM_22885 PF03621 MbtH-like protein YIM_22890 PF00975 Thioesterase domain YIM_22890 PF00501 AMP-binding enzyme YIM_22890 PF13193 AMP-binding enzyme C-terminal domain YIM_22890 PF00550 Phosphopantetheine attachment site YIM_22890 PF00668 Condensation domain YIM_22895 PF00501 AMP-binding enzyme YIM_22895 PF13193 AMP-binding enzyme C-terminal domain YIM_22895 PF00975 Thioesterase domain YIM_22895 PF00550 Phosphopantetheine attachment site YIM_22895 PF00668 Condensation domain YIM_22900 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_22900 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_22905 PF00196 Bacterial regulatory proteins, luxR family YIM_22905 PF00072 Response regulator receiver domain YIM_22915 PF13649 Methyltransferase domain YIM_22920 PF00155 Aminotransferase class I and II YIM_22935 PF03965 Penicillinase repressor YIM_22940 PF01476 LysM domain YIM_22940 PF00877 NlpC/P60 family YIM_22940 PF08239 Bacterial SH3 domain YIM_22945 PF00196 Bacterial regulatory proteins, luxR family YIM_22945 PF13185 GAF domain YIM_22950 PF00083 Sugar (and other) transporter YIM_22950 PF07690 Major Facilitator Superfamily YIM_22955 PF00501 AMP-binding enzyme YIM_22955 PF13193 AMP-binding enzyme C-terminal domain YIM_22965 PF00083 Sugar (and other) transporter YIM_22975 PF01266 FAD dependent oxidoreductase YIM_22985 PF00440 Bacterial regulatory proteins, tetR family YIM_22990 PF00248 Aldo/keto reductase family YIM_23005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_23005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_23015 PF00881 Nitroreductase family YIM_23020 PF00486 Transcriptional regulatory protein, C terminal YIM_23025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_23025 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_23030 PF00425 chorismate binding enzyme YIM_23035 PF00891 O-methyltransferase domain YIM_23055 PF01494 FAD binding domain YIM_23065 PF00775 Dioxygenase YIM_23065 PF04444 Catechol dioxygenase N terminus YIM_23070 PF00465 Iron-containing alcohol dehydrogenase YIM_23080 PF00171 Aldehyde dehydrogenase family YIM_23085 PF00083 Sugar (and other) transporter YIM_23095 PF00196 Bacterial regulatory proteins, luxR family YIM_23095 PF00072 Response regulator receiver domain YIM_23100 PF00202 Aminotransferase class-III YIM_23105 PF01425 Amidase YIM_23115 PF01613 Flavin reductase like domain YIM_23120 PF13426 PAS domain YIM_23120 PF13188 PAS domain YIM_23120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_23125 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_23135 PF00355 Rieske [2Fe-2S] domain YIM_23135 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YIM_23150 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_23150 PF00175 Oxidoreductase NAD-binding domain YIM_23160 PF01425 Amidase YIM_23165 PF00005 ABC transporter YIM_23170 PF12399 Branched-chain amino acid ATP-binding cassette transporter YIM_23170 PF00005 ABC transporter YIM_23210 PF03786 D-mannonate dehydratase (UxuA) YIM_23220 PF07690 Major Facilitator Superfamily YIM_23230 PF01494 FAD binding domain YIM_23235 PF13411 MerR HTH family regulatory protein YIM_23235 PF06445 GyrI-like small molecule binding domain YIM_23240 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_23240 PF00528 Binding-protein-dependent transport system inner membrane component YIM_23245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_23255 PF12146 Serine aminopeptidase, S33 YIM_23260 PF03466 LysR substrate binding domain YIM_23260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_23265 PF00857 Isochorismatase family YIM_23270 PF00296 Luciferase-like monooxygenase YIM_23285 PF00330 Aconitase family (aconitate hydratase) YIM_23305 PF08450 SMP-30/Gluconolactonase/LRE-like region YIM_23305 PF00069 Protein kinase domain YIM_23305 PF01436 NHL repeat YIM_23355 PF00486 Transcriptional regulatory protein, C terminal YIM_23355 PF03704 Bacterial transcriptional activator domain YIM_23355 PF00931 NB-ARC domain YIM_23360 PF03449 Transcription elongation factor, N-terminal YIM_23360 PF01272 Transcription elongation factor, GreA/GreB, C-term YIM_23365 PF01266 FAD dependent oxidoreductase YIM_23375 PF00440 Bacterial regulatory proteins, tetR family YIM_23385 PF01546 Peptidase family M20/M25/M40 YIM_23390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_23390 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_23390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_23395 PF00083 Sugar (and other) transporter YIM_23395 PF07690 Major Facilitator Superfamily YIM_23405 PF07687 Peptidase dimerisation domain YIM_23405 PF01546 Peptidase family M20/M25/M40 YIM_23410 PF00196 Bacterial regulatory proteins, luxR family YIM_23415 PF13649 Methyltransferase domain YIM_23420 PF00313 'Cold-shock' DNA-binding domain YIM_23425 PF07729 FCD domain YIM_23425 PF00392 Bacterial regulatory proteins, gntR family YIM_23435 PF08402 TOBE domain YIM_23435 PF00005 ABC transporter YIM_23455 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_23455 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_23455 PF00378 Enoyl-CoA hydratase/isomerase YIM_23465 PF13380 CoA binding domain YIM_23465 PF13607 Succinyl-CoA ligase like flavodoxin domain YIM_23465 PF00583 Acetyltransferase (GNAT) family YIM_23470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_23470 PF13378 Enolase C-terminal domain-like YIM_23475 PF00528 Binding-protein-dependent transport system inner membrane component YIM_23500 PF00331 Glycosyl hydrolase family 10 YIM_23500 PF00652 Ricin-type beta-trefoil lectin domain YIM_23530 PF00106 short chain dehydrogenase YIM_23535 PF08361 MAATS-type transcriptional repressor, C-terminal region YIM_23535 PF00440 Bacterial regulatory proteins, tetR family YIM_23550 PF00011 Hsp20/alpha crystallin family YIM_23560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_23560 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_23560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_23565 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain YIM_23565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_23565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_23570 PF01144 Coenzyme A transferase YIM_23575 PF01144 Coenzyme A transferase YIM_23580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_23580 PF03466 LysR substrate binding domain YIM_23585 PF07690 Major Facilitator Superfamily YIM_23585 PF00083 Sugar (and other) transporter YIM_23595 PF00156 Phosphoribosyl transferase domain YIM_23595 PF01738 Dienelactone hydrolase family YIM_23610 PF03631 Virulence factor BrkB YIM_23640 PF00067 Cytochrome P450 YIM_23655 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_23655 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_23655 PF16197 Ketoacyl-synthetase C-terminal extension YIM_23655 PF00202 Aminotransferase class-III YIM_23655 PF00668 Condensation domain YIM_23655 PF13193 AMP-binding enzyme C-terminal domain YIM_23655 PF00501 AMP-binding enzyme YIM_23655 PF00550 Phosphopantetheine attachment site YIM_23675 PF00550 Phosphopantetheine attachment site YIM_23675 PF00501 AMP-binding enzyme YIM_23675 PF13193 AMP-binding enzyme C-terminal domain YIM_23675 PF00668 Condensation domain YIM_23675 PF07993 Male sterility protein YIM_23680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YIM_23680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YIM_23695 PF00202 Aminotransferase class-III YIM_23710 PF00550 Phosphopantetheine attachment site YIM_23715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YIM_23715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YIM_23720 PF13452 N-terminal half of MaoC dehydratase YIM_23760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_23760 PF03466 LysR substrate binding domain YIM_23765 PF07690 Major Facilitator Superfamily YIM_23775 PF12706 Beta-lactamase superfamily domain YIM_23785 PF01022 Bacterial regulatory protein, arsR family YIM_23800 PF08240 Alcohol dehydrogenase GroES-like domain YIM_23805 PF00582 Universal stress protein family YIM_23815 PF03448 MgtE intracellular N domain YIM_23815 PF00571 CBS domain YIM_23815 PF01769 Divalent cation transporter YIM_23820 PF00582 Universal stress protein family YIM_23825 PF00072 Response regulator receiver domain YIM_23825 PF00196 Bacterial regulatory proteins, luxR family YIM_23835 PF13492 GAF domain YIM_23835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_23835 PF13185 GAF domain YIM_23835 PF07730 Histidine kinase YIM_23870 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YIM_23870 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YIM_23875 PF07690 Major Facilitator Superfamily YIM_23890 PF02515 CoA-transferase family III YIM_23900 PF00005 ABC transporter YIM_23905 PF00528 Binding-protein-dependent transport system inner membrane component YIM_23920 PF00171 Aldehyde dehydrogenase family YIM_23925 PF00378 Enoyl-CoA hydratase/isomerase YIM_23930 PF00501 AMP-binding enzyme YIM_23930 PF13193 AMP-binding enzyme C-terminal domain YIM_23935 PF01047 MarR family YIM_23940 PF13291 ACT domain YIM_23940 PF00291 Pyridoxal-phosphate dependent enzyme YIM_23945 PF03466 LysR substrate binding domain YIM_23945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_23955 PF02627 Carboxymuconolactone decarboxylase family YIM_23960 PF00486 Transcriptional regulatory protein, C terminal YIM_23960 PF00931 NB-ARC domain YIM_23960 PF03704 Bacterial transcriptional activator domain YIM_23975 PF08329 Chitinase A, N-terminal domain YIM_23975 PF00704 Glycosyl hydrolases family 18 YIM_23980 PF02311 AraC-like ligand binding domain YIM_23980 PF12833 Helix-turn-helix domain YIM_23985 PF07690 Major Facilitator Superfamily YIM_23995 PF00970 Oxidoreductase FAD-binding domain YIM_23995 PF00175 Oxidoreductase NAD-binding domain YIM_23995 PF00042 Globin YIM_24005 PF00296 Luciferase-like monooxygenase YIM_24030 PF01475 Ferric uptake regulator family YIM_24035 PF00141 Peroxidase YIM_24050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_24050 PF07730 Histidine kinase YIM_24050 PF00672 HAMP domain YIM_24055 PF00072 Response regulator receiver domain YIM_24055 PF00196 Bacterial regulatory proteins, luxR family YIM_24060 PF07969 Amidohydrolase family YIM_24065 PF07690 Major Facilitator Superfamily YIM_24070 PF00067 Cytochrome P450 YIM_24075 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_24085 PF00355 Rieske [2Fe-2S] domain YIM_24090 PF09339 IclR helix-turn-helix domain YIM_24090 PF01614 Bacterial transcriptional regulator YIM_24115 PF00582 Universal stress protein family YIM_24120 PF00582 Universal stress protein family YIM_24150 PF00106 short chain dehydrogenase YIM_24155 PF00296 Luciferase-like monooxygenase YIM_24165 PF01638 HxlR-like helix-turn-helix YIM_24170 PF01380 SIS domain YIM_24175 PF00294 pfkB family carbohydrate kinase YIM_24180 PF01116 Fructose-bisphosphate aldolase class-II YIM_24185 PF00455 DeoR C terminal sensor domain YIM_24185 PF08220 DeoR-like helix-turn-helix domain YIM_24195 PF00528 Binding-protein-dependent transport system inner membrane component YIM_24200 PF00528 Binding-protein-dependent transport system inner membrane component YIM_24205 PF08402 TOBE domain YIM_24205 PF00005 ABC transporter YIM_24215 PF00455 DeoR C terminal sensor domain YIM_24215 PF08220 DeoR-like helix-turn-helix domain YIM_24220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_24235 PF00171 Aldehyde dehydrogenase family YIM_24240 PF01619 Proline dehydrogenase YIM_24255 PF00248 Aldo/keto reductase family YIM_24260 PF00296 Luciferase-like monooxygenase YIM_24265 PF02673 Bacitracin resistance protein BacA YIM_24275 PF01432 Peptidase family M3 YIM_24285 PF00854 POT family YIM_24290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain YIM_24290 PF00056 lactate/malate dehydrogenase, NAD binding domain YIM_24305 PF07971 Glycosyl hydrolase family 92 YIM_24305 PF17678 Glycosyl hydrolase family 92 N-terminal domain YIM_24310 PF07687 Peptidase dimerisation domain YIM_24310 PF01546 Peptidase family M20/M25/M40 YIM_24320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_24325 PF00528 Binding-protein-dependent transport system inner membrane component YIM_24330 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_24330 PF00528 Binding-protein-dependent transport system inner membrane component YIM_24335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_24335 PF00005 ABC transporter YIM_24360 PF17676 LD-carboxypeptidase C-terminal domain YIM_24360 PF02016 LD-carboxypeptidase N-terminal domain YIM_24385 PF12706 Beta-lactamase superfamily domain YIM_24400 PF00440 Bacterial regulatory proteins, tetR family YIM_24415 PF01145 SPFH domain / Band 7 family YIM_24425 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_24425 PF00440 Bacterial regulatory proteins, tetR family YIM_24460 PF07690 Major Facilitator Superfamily YIM_24465 PF03358 NADPH-dependent FMN reductase YIM_24475 PF05368 NmrA-like family YIM_24480 PF17760 UvrA interaction domain YIM_24480 PF17755 UvrA DNA-binding domain YIM_24480 PF00005 ABC transporter YIM_24490 PF04542 Sigma-70 region 2 YIM_24490 PF08281 Sigma-70, region 4 YIM_24495 PF00248 Aldo/keto reductase family YIM_24520 PF12833 Helix-turn-helix domain YIM_24520 PF12852 Cupin YIM_24530 PF06441 Epoxide hydrolase N terminus YIM_24540 PF00271 Helicase conserved C-terminal domain YIM_24540 PF00176 SNF2 family N-terminal domain YIM_24540 PF12419 SNF2 Helicase protein YIM_24555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YIM_24565 PF01037 Lrp/AsnC ligand binding domain YIM_24580 PF00795 Carbon-nitrogen hydrolase YIM_24585 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_24585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_24585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_24590 PF02899 Phage integrase, N-terminal SAM-like domain YIM_24590 PF00589 Phage integrase family YIM_24600 PF00072 Response regulator receiver domain YIM_24600 PF00196 Bacterial regulatory proteins, luxR family YIM_24605 PF07730 Histidine kinase YIM_24625 PF13360 PQQ-like domain YIM_24625 PF00069 Protein kinase domain YIM_24630 PF00069 Protein kinase domain YIM_24630 PF13360 PQQ-like domain YIM_24635 PF04542 Sigma-70 region 2 YIM_24635 PF12680 SnoaL-like domain YIM_24635 PF08281 Sigma-70, region 4 YIM_24640 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_24670 PF12894 Anaphase-promoting complex subunit 4 WD40 domain YIM_24670 PF00400 WD domain, G-beta repeat YIM_24705 PF00672 HAMP domain YIM_24705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_24705 PF00512 His Kinase A (phospho-acceptor) domain YIM_24710 PF00072 Response regulator receiver domain YIM_24710 PF00486 Transcriptional regulatory protein, C terminal YIM_24740 PF00106 short chain dehydrogenase YIM_24755 PF00392 Bacterial regulatory proteins, gntR family YIM_24760 PF00005 ABC transporter YIM_24775 PF01022 Bacterial regulatory protein, arsR family YIM_24780 PF00561 alpha/beta hydrolase fold YIM_24790 PF01638 HxlR-like helix-turn-helix YIM_24805 PF04542 Sigma-70 region 2 YIM_24805 PF08281 Sigma-70, region 4 YIM_24810 PF03795 YCII-related domain YIM_24830 PF01494 FAD binding domain YIM_24840 PF01370 NAD dependent epimerase/dehydratase family YIM_24845 PF00440 Bacterial regulatory proteins, tetR family YIM_24850 PF07690 Major Facilitator Superfamily YIM_24860 PF04542 Sigma-70 region 2 YIM_24860 PF08281 Sigma-70, region 4 YIM_24865 PF03795 YCII-related domain YIM_24890 PF17827 PrmC N-terminal domain YIM_24890 PF13649 Methyltransferase domain YIM_24895 PF13649 Methyltransferase domain YIM_24940 PF00589 Phage integrase family YIM_24940 PF02899 Phage integrase, N-terminal SAM-like domain YIM_24970 PF00561 alpha/beta hydrolase fold YIM_24975 PF00440 Bacterial regulatory proteins, tetR family YIM_24975 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_24990 PF00265 Thymidine kinase YIM_24995 PF13397 RNA polymerase-binding protein YIM_25000 PF00484 Carbonic anhydrase YIM_25005 PF00535 Glycosyl transferase family 2 YIM_25010 PF00795 Carbon-nitrogen hydrolase YIM_25010 PF00535 Glycosyl transferase family 2 YIM_25015 PF01979 Amidohydrolase family YIM_25020 PF12544 Lysine-2,3-aminomutase YIM_25020 PF04055 Radical SAM superfamily YIM_25030 PF02136 Nuclear transport factor 2 (NTF2) domain YIM_25055 PF01809 Putative membrane protein insertion efficiency factor YIM_25065 PF08659 KR domain YIM_25065 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_25065 PF14765 Polyketide synthase dehydratase YIM_25065 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_25065 PF16197 Ketoacyl-synthetase C-terminal extension YIM_25065 PF08990 Erythronolide synthase docking YIM_25065 PF08240 Alcohol dehydrogenase GroES-like domain YIM_25065 PF00550 Phosphopantetheine attachment site YIM_25065 PF00698 Acyl transferase domain YIM_25070 PF00440 Bacterial regulatory proteins, tetR family YIM_25090 PF00733 Asparagine synthase YIM_25090 PF13537 Glutamine amidotransferase domain YIM_25095 PF01593 Flavin containing amine oxidoreductase YIM_25100 PF00486 Transcriptional regulatory protein, C terminal YIM_25100 PF00072 Response regulator receiver domain YIM_25105 PF01494 FAD binding domain YIM_25110 PF13193 AMP-binding enzyme C-terminal domain YIM_25110 PF00668 Condensation domain YIM_25110 PF00501 AMP-binding enzyme YIM_25110 PF00550 Phosphopantetheine attachment site YIM_25115 PF13193 AMP-binding enzyme C-terminal domain YIM_25115 PF00668 Condensation domain YIM_25115 PF00550 Phosphopantetheine attachment site YIM_25115 PF00501 AMP-binding enzyme YIM_25125 PF00891 O-methyltransferase domain YIM_25130 PF03301 Tryptophan 2,3-dioxygenase YIM_25135 PF00266 Aminotransferase class-V YIM_25160 PF01565 FAD binding domain YIM_25160 PF02913 FAD linked oxidases, C-terminal domain YIM_25170 PF17827 PrmC N-terminal domain YIM_25170 PF05175 Methyltransferase small domain YIM_25175 PF00067 Cytochrome P450 YIM_25180 PF08240 Alcohol dehydrogenase GroES-like domain YIM_25180 PF00107 Zinc-binding dehydrogenase YIM_25185 PF00171 Aldehyde dehydrogenase family YIM_25195 PF07690 Major Facilitator Superfamily YIM_25210 PF17760 UvrA interaction domain YIM_25210 PF17755 UvrA DNA-binding domain YIM_25220 PF03466 LysR substrate binding domain YIM_25220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_25230 PF07690 Major Facilitator Superfamily YIM_25240 PF00698 Acyl transferase domain YIM_25240 PF08659 KR domain YIM_25240 PF00550 Phosphopantetheine attachment site YIM_25240 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_25240 PF16197 Ketoacyl-synthetase C-terminal extension YIM_25240 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_25240 PF14765 Polyketide synthase dehydratase YIM_25250 PF00155 Aminotransferase class I and II YIM_25265 PF00005 ABC transporter YIM_25265 PF02687 FtsX-like permease family YIM_25265 PF12704 MacB-like periplasmic core domain YIM_25270 PF00005 ABC transporter YIM_25300 PF04978 Protein of unknown function (DUF664) YIM_25315 PF03621 MbtH-like protein YIM_25320 PF00668 Condensation domain YIM_25320 PF00550 Phosphopantetheine attachment site YIM_25320 PF13193 AMP-binding enzyme C-terminal domain YIM_25320 PF00501 AMP-binding enzyme YIM_25320 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_25320 PF00202 Aminotransferase class-III YIM_25320 PF16197 Ketoacyl-synthetase C-terminal extension YIM_25320 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_25330 PF00501 AMP-binding enzyme YIM_25330 PF13193 AMP-binding enzyme C-terminal domain YIM_25330 PF00550 Phosphopantetheine attachment site YIM_25330 PF00668 Condensation domain YIM_25335 PF13193 AMP-binding enzyme C-terminal domain YIM_25335 PF00975 Thioesterase domain YIM_25335 PF00550 Phosphopantetheine attachment site YIM_25335 PF00501 AMP-binding enzyme YIM_25335 PF00668 Condensation domain YIM_25340 PF07690 Major Facilitator Superfamily YIM_25350 PF01638 HxlR-like helix-turn-helix YIM_25365 PF07690 Major Facilitator Superfamily YIM_25380 PF08241 Methyltransferase domain YIM_25400 PF13302 Acetyltransferase (GNAT) domain YIM_25420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_25420 PF03466 LysR substrate binding domain YIM_25485 PF03704 Bacterial transcriptional activator domain YIM_25485 PF00486 Transcriptional regulatory protein, C terminal YIM_25485 PF00931 NB-ARC domain YIM_25505 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_25505 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_25510 PF03466 LysR substrate binding domain YIM_25510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_25525 PF12697 Alpha/beta hydrolase family YIM_25535 PF04978 Protein of unknown function (DUF664) YIM_25545 PF17925 Tetracyclin repressor-like, C-terminal domain YIM_25545 PF00440 Bacterial regulatory proteins, tetR family YIM_25560 PF00551 Formyl transferase YIM_25565 PF03313 Serine dehydratase alpha chain YIM_25565 PF03315 Serine dehydratase beta chain YIM_25570 PF07729 FCD domain YIM_25570 PF00392 Bacterial regulatory proteins, gntR family YIM_25575 PF08669 Glycine cleavage T-protein C-terminal barrel domain YIM_25575 PF16350 FAD dependent oxidoreductase central domain YIM_25575 PF01571 Aminomethyltransferase folate-binding domain YIM_25575 PF01266 FAD dependent oxidoreductase YIM_25585 PF17806 Sarcosine oxidase A3 domain YIM_25585 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_25585 PF01571 Aminomethyltransferase folate-binding domain YIM_25585 PF08669 Glycine cleavage T-protein C-terminal barrel domain YIM_25590 PF04267 Sarcosine oxidase, delta subunit family YIM_25595 PF01266 FAD dependent oxidoreductase YIM_25600 PF00464 Serine hydroxymethyltransferase YIM_25605 PF16123 Hydroxyacylglutathione hydrolase C-terminus YIM_25605 PF00753 Metallo-beta-lactamase superfamily YIM_25610 PF00107 Zinc-binding dehydrogenase YIM_25610 PF08240 Alcohol dehydrogenase GroES-like domain YIM_25615 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YIM_25615 PF00355 Rieske [2Fe-2S] domain YIM_25620 PF14759 Reductase C-terminal YIM_25620 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_25625 PF00355 Rieske [2Fe-2S] domain YIM_25630 PF01614 Bacterial transcriptional regulator YIM_25630 PF09339 IclR helix-turn-helix domain YIM_25635 PF08946 Osmosensory transporter coiled coil YIM_25635 PF00083 Sugar (and other) transporter YIM_25670 PF00296 Luciferase-like monooxygenase YIM_25685 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_25685 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_25700 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_25700 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_25705 PF00550 Phosphopantetheine attachment site YIM_25710 PF00291 Pyridoxal-phosphate dependent enzyme YIM_25715 PF00196 Bacterial regulatory proteins, luxR family YIM_25720 PF13193 AMP-binding enzyme C-terminal domain YIM_25720 PF00501 AMP-binding enzyme YIM_25725 PF00221 Aromatic amino acid lyase YIM_25735 PF13191 AAA ATPase domain YIM_25735 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_25745 PF00196 Bacterial regulatory proteins, luxR family YIM_25755 PF07690 Major Facilitator Superfamily YIM_25760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_25760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_25765 PF00668 Condensation domain YIM_25765 PF00550 Phosphopantetheine attachment site YIM_25765 PF00975 Thioesterase domain YIM_25765 PF00501 AMP-binding enzyme YIM_25765 PF13193 AMP-binding enzyme C-terminal domain YIM_25770 PF13193 AMP-binding enzyme C-terminal domain YIM_25770 PF00501 AMP-binding enzyme YIM_25770 PF07993 Male sterility protein YIM_25770 PF00668 Condensation domain YIM_25770 PF00550 Phosphopantetheine attachment site YIM_25775 PF03621 MbtH-like protein YIM_25780 PF00501 AMP-binding enzyme YIM_25780 PF13193 AMP-binding enzyme C-terminal domain YIM_25780 PF00550 Phosphopantetheine attachment site YIM_25780 PF00668 Condensation domain YIM_25785 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YIM_25795 PF00550 Phosphopantetheine attachment site YIM_25795 PF00698 Acyl transferase domain YIM_25795 PF08240 Alcohol dehydrogenase GroES-like domain YIM_25795 PF14765 Polyketide synthase dehydratase YIM_25795 PF16197 Ketoacyl-synthetase C-terminal extension YIM_25795 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_25795 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_25795 PF08659 KR domain YIM_25795 PF00107 Zinc-binding dehydrogenase YIM_25805 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_25825 PF01032 FecCD transport family YIM_25835 PF04616 Glycosyl hydrolases family 43 YIM_25835 PF16369 C-terminal lipocalin-like domain YIM_25845 PF00717 Peptidase S24-like YIM_25845 PF01726 LexA DNA binding domain YIM_25865 PF00732 GMC oxidoreductase YIM_25865 PF05199 GMC oxidoreductase YIM_25885 PF07690 Major Facilitator Superfamily YIM_25890 PF07859 alpha/beta hydrolase fold YIM_25900 PF00196 Bacterial regulatory proteins, luxR family YIM_25900 PF00072 Response regulator receiver domain YIM_25905 PF07730 Histidine kinase YIM_25920 PF06441 Epoxide hydrolase N terminus YIM_25970 PF00486 Transcriptional regulatory protein, C terminal YIM_25970 PF00931 NB-ARC domain YIM_25970 PF03704 Bacterial transcriptional activator domain YIM_25975 PF00440 Bacterial regulatory proteins, tetR family YIM_25990 PF00793 DAHP synthetase I family YIM_25995 PF07690 Major Facilitator Superfamily YIM_26000 PF00501 AMP-binding enzyme YIM_26000 PF13193 AMP-binding enzyme C-terminal domain YIM_26000 PF00668 Condensation domain YIM_26000 PF00550 Phosphopantetheine attachment site YIM_26005 PF00005 ABC transporter YIM_26010 PF01032 FecCD transport family YIM_26015 PF01032 FecCD transport family YIM_26025 PF08021 Siderophore-interacting FAD-binding domain YIM_26025 PF04954 Siderophore-interacting protein YIM_26030 PF00550 Phosphopantetheine attachment site YIM_26030 PF00857 Isochorismatase family YIM_26035 PF00550 Phosphopantetheine attachment site YIM_26035 PF00857 Isochorismatase family YIM_26040 PF00501 AMP-binding enzyme YIM_26040 PF13193 AMP-binding enzyme C-terminal domain YIM_26045 PF00425 chorismate binding enzyme YIM_26050 PF00106 short chain dehydrogenase YIM_26055 PF00364 Biotin-requiring enzyme YIM_26055 PF00561 alpha/beta hydrolase fold YIM_26065 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_26065 PF07724 AAA domain (Cdc48 subfamily) YIM_26070 PF00795 Carbon-nitrogen hydrolase YIM_26075 PF02293 AmiS/UreI family transporter YIM_26095 PF01384 Phosphate transporter family YIM_26100 PF00248 Aldo/keto reductase family YIM_26110 PF01380 SIS domain YIM_26130 PF02913 FAD linked oxidases, C-terminal domain YIM_26130 PF01565 FAD binding domain YIM_26145 PF00083 Sugar (and other) transporter YIM_26145 PF07690 Major Facilitator Superfamily YIM_26150 PF01047 MarR family YIM_26155 PF03176 MMPL family YIM_26165 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_26170 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_26170 PF01799 [2Fe-2S] binding domain YIM_26200 PF01965 DJ-1/PfpI family YIM_26205 PF00232 Glycosyl hydrolase family 1 YIM_26215 PF01970 Tripartite tricarboxylate transporter TctA family YIM_26225 PF03401 Tripartite tricarboxylate transporter family receptor YIM_26230 PF03466 LysR substrate binding domain YIM_26230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_26235 PF00701 Dihydrodipicolinate synthetase family YIM_26240 PF13378 Enolase C-terminal domain-like YIM_26240 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_26245 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_26245 PF13378 Enolase C-terminal domain-like YIM_26255 PF03741 Integral membrane protein TerC family YIM_26265 PF01494 FAD binding domain YIM_26285 PF00155 Aminotransferase class I and II YIM_26290 PF00892 EamA-like transporter family YIM_26295 PF00701 Dihydrodipicolinate synthetase family YIM_26320 PF00005 ABC transporter YIM_26340 PF00072 Response regulator receiver domain YIM_26340 PF00486 Transcriptional regulatory protein, C terminal YIM_26355 PF07005 Sugar-binding N-terminal domain YIM_26355 PF17042 Nucleotide-binding C-terminal domain YIM_26360 PF00596 Class II Aldolase and Adducin N-terminal domain YIM_26365 PF08220 DeoR-like helix-turn-helix domain YIM_26365 PF00455 DeoR C terminal sensor domain YIM_26380 PF01047 MarR family YIM_26400 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_26410 PF07690 Major Facilitator Superfamily YIM_26415 PF09278 MerR, DNA binding YIM_26415 PF00376 MerR family regulatory protein YIM_26425 PF07859 alpha/beta hydrolase fold YIM_26440 PF05711 Macrocin-O-methyltransferase (TylF) YIM_26450 PF12680 SnoaL-like domain YIM_26450 PF04542 Sigma-70 region 2 YIM_26450 PF08281 Sigma-70, region 4 YIM_26460 PF01614 Bacterial transcriptional regulator YIM_26460 PF09339 IclR helix-turn-helix domain YIM_26465 PF02615 Malate/L-lactate dehydrogenase YIM_26470 PF07690 Major Facilitator Superfamily YIM_26470 PF00083 Sugar (and other) transporter YIM_26475 PF01047 MarR family YIM_26480 PF02566 OsmC-like protein YIM_26490 PF01810 LysE type translocator YIM_26495 PF00457 Glycosyl hydrolases family 11 YIM_26500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_26500 PF13378 Enolase C-terminal domain-like YIM_26510 PF08450 SMP-30/Gluconolactonase/LRE-like region YIM_26515 PF00171 Aldehyde dehydrogenase family YIM_26520 PF09339 IclR helix-turn-helix domain YIM_26520 PF01614 Bacterial transcriptional regulator YIM_26525 PF01263 Aldose 1-epimerase YIM_26530 PF04616 Glycosyl hydrolases family 43 YIM_26530 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain YIM_26535 PF01614 Bacterial transcriptional regulator YIM_26535 PF09339 IclR helix-turn-helix domain YIM_26540 PF08240 Alcohol dehydrogenase GroES-like domain YIM_26540 PF00107 Zinc-binding dehydrogenase YIM_26545 PF02653 Branched-chain amino acid transport system / permease component YIM_26550 PF02653 Branched-chain amino acid transport system / permease component YIM_26555 PF00005 ABC transporter YIM_26560 PF13407 Periplasmic binding protein domain YIM_26565 PF00356 Bacterial regulatory proteins, lacI family YIM_26575 PF06964 Alpha-L-arabinofuranosidase C-terminal domain YIM_26575 PF02018 Carbohydrate binding domain YIM_26580 PF07690 Major Facilitator Superfamily YIM_26595 PF00144 Beta-lactamase YIM_26600 PF06441 Epoxide hydrolase N terminus YIM_26620 PF06689 ClpX C4-type zinc finger YIM_26620 PF07724 AAA domain (Cdc48 subfamily) YIM_26620 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_26630 PF00440 Bacterial regulatory proteins, tetR family YIM_26635 PF07690 Major Facilitator Superfamily YIM_26655 PF07690 Major Facilitator Superfamily YIM_26660 PF01638 HxlR-like helix-turn-helix YIM_26665 PF00069 Protein kinase domain YIM_26670 PF02515 CoA-transferase family III YIM_26675 PF02913 FAD linked oxidases, C-terminal domain YIM_26675 PF01565 FAD binding domain YIM_26675 PF13183 4Fe-4S dicluster domain YIM_26680 PF00266 Aminotransferase class-V YIM_26695 PF02463 RecF/RecN/SMC N terminal domain YIM_26700 PF04237 YjbR YIM_26705 PF07729 FCD domain YIM_26705 PF00392 Bacterial regulatory proteins, gntR family YIM_26715 PF03600 Citrate transporter YIM_26725 PF07730 Histidine kinase YIM_26725 PF05231 MASE1 YIM_26725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_26730 PF00072 Response regulator receiver domain YIM_26730 PF00196 Bacterial regulatory proteins, luxR family YIM_26735 PF01757 Acyltransferase family YIM_26745 PF04542 Sigma-70 region 2 YIM_26745 PF04545 Sigma-70, region 4 YIM_26760 PF17755 UvrA DNA-binding domain YIM_26760 PF17760 UvrA interaction domain YIM_26760 PF00005 ABC transporter YIM_26765 PF07739 TipAS antibiotic-recognition domain YIM_26765 PF13411 MerR HTH family regulatory protein YIM_26785 PF17755 UvrA DNA-binding domain YIM_26785 PF00005 ABC transporter YIM_26785 PF17760 UvrA interaction domain YIM_26800 PF17801 Alpha galactosidase C-terminal beta sandwich domain YIM_26800 PF16499 Alpha galactosidase A YIM_26820 PF07977 FabA-like domain YIM_26825 PF07977 FabA-like domain YIM_26830 PF00550 Phosphopantetheine attachment site YIM_26835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_26835 PF00289 Biotin carboxylase, N-terminal domain YIM_26835 PF02785 Biotin carboxylase C-terminal domain YIM_26840 PF00364 Biotin-requiring enzyme YIM_26845 PF01039 Carboxyl transferase domain YIM_26845 PF17848 Acetyl-coA carboxylase zinc finger domain YIM_26865 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_26865 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_26880 PF14765 Polyketide synthase dehydratase YIM_26880 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_26880 PF08659 KR domain YIM_26880 PF00698 Acyl transferase domain YIM_26880 PF16197 Ketoacyl-synthetase C-terminal extension YIM_26880 PF00550 Phosphopantetheine attachment site YIM_26880 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_26885 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_26885 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_26890 PF00550 Phosphopantetheine attachment site YIM_26900 PF07977 FabA-like domain YIM_26905 PF07977 FabA-like domain YIM_26925 PF00067 Cytochrome P450 YIM_26935 PF01494 FAD binding domain YIM_26945 PF07690 Major Facilitator Superfamily YIM_26950 PF00440 Bacterial regulatory proteins, tetR family YIM_26950 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_26960 PF00202 Aminotransferase class-III YIM_26965 PF00743 Flavin-binding monooxygenase-like YIM_26970 PF13649 Methyltransferase domain YIM_26985 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_26985 PF13192 Thioredoxin domain YIM_26990 PF01209 ubiE/COQ5 methyltransferase family YIM_27000 PF03965 Penicillinase repressor YIM_27015 PF00550 Phosphopantetheine attachment site YIM_27015 PF00501 AMP-binding enzyme YIM_27015 PF13193 AMP-binding enzyme C-terminal domain YIM_27015 PF00668 Condensation domain YIM_27025 PF00975 Thioesterase domain YIM_27035 PF13732 Domain of unknown function (DUF4162) YIM_27035 PF00005 ABC transporter YIM_27045 PF14535 AMP-binding enzyme C-terminal domain YIM_27045 PF00501 AMP-binding enzyme YIM_27050 PF00072 Response regulator receiver domain YIM_27050 PF00196 Bacterial regulatory proteins, luxR family YIM_27055 PF12146 Serine aminopeptidase, S33 YIM_27060 PF00561 alpha/beta hydrolase fold YIM_27075 PF03781 Sulfatase-modifying factor enzyme 1 YIM_27095 PF00296 Luciferase-like monooxygenase YIM_27100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_27100 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_27100 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_27105 PF03358 NADPH-dependent FMN reductase YIM_27110 PF01638 HxlR-like helix-turn-helix YIM_27120 PF16990 Carbohydrate binding module (family 35) YIM_27120 PF03422 Carbohydrate binding module (family 6) YIM_27120 PF13199 Glycosyl hydrolase family 66 YIM_27125 PF01979 Amidohydrolase family YIM_27135 PF07690 Major Facilitator Superfamily YIM_27170 PF01037 Lrp/AsnC ligand binding domain YIM_27175 PF00557 Metallopeptidase family M24 YIM_27175 PF01321 Creatinase/Prolidase N-terminal domain YIM_27190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YIM_27190 PF01367 5'-3' exonuclease, C-terminal SAM fold YIM_27195 PF13530 Sterol carrier protein domain YIM_27195 PF17668 Acetyltransferase (GNAT) domain YIM_27205 PF13530 Sterol carrier protein domain YIM_27205 PF17668 Acetyltransferase (GNAT) domain YIM_27215 PF00270 DEAD/DEAH box helicase YIM_27215 PF08148 DSHCT (NUC185) domain YIM_27215 PF00271 Helicase conserved C-terminal domain YIM_27225 PF00781 Diacylglycerol kinase catalytic domain YIM_27230 PF00902 Sec-independent protein translocase protein (TatC) YIM_27235 PF02416 mttA/Hcf106 family YIM_27245 PF13280 WYL domain YIM_27250 PF13280 WYL domain YIM_27265 PF03136 Pup-ligase protein YIM_27275 PF00227 Proteasome subunit YIM_27280 PF00227 Proteasome subunit YIM_27285 PF05639 Pup-like protein YIM_27290 PF03136 Pup-ligase protein YIM_27295 PF00293 NUDIX domain YIM_27310 PF00150 Cellulase (glycosyl hydrolase family 5) YIM_27310 PF00553 Cellulose binding domain YIM_27325 PF16450 Proteasomal ATPase OB C-terminal domain YIM_27325 PF00004 ATPase family associated with various cellular activities (AAA) YIM_27325 PF17758 Proteasomal ATPase OB N-terminal domain YIM_27340 PF08704 tRNA methyltransferase complex GCD14 subunit YIM_27345 PF02163 Peptidase family M50 YIM_27345 PF00571 CBS domain YIM_27360 PF13614 AAA domain YIM_27370 PF01634 ATP phosphoribosyltransferase YIM_27370 PF08029 HisG, C-terminal domain YIM_27375 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase YIM_27385 PF13419 Haloacid dehalogenase-like hydrolase YIM_27390 PF02965 Vitamin B12 dependent methionine synthase, activation domain YIM_27390 PF02310 B12 binding domain YIM_27390 PF00809 Pterin binding enzyme YIM_27390 PF02607 B12 binding domain YIM_27390 PF02574 Homocysteine S-methyltransferase YIM_27405 PF07690 Major Facilitator Superfamily YIM_27410 PF01209 ubiE/COQ5 methyltransferase family YIM_27415 PF01738 Dienelactone hydrolase family YIM_27425 PF13193 AMP-binding enzyme C-terminal domain YIM_27425 PF00501 AMP-binding enzyme YIM_27430 PF00196 Bacterial regulatory proteins, luxR family YIM_27455 PF00005 ABC transporter YIM_27460 PF00005 ABC transporter YIM_27465 PF01406 tRNA synthetases class I (C) catalytic domain YIM_27470 PF13411 MerR HTH family regulatory protein YIM_27470 PF07739 TipAS antibiotic-recognition domain YIM_27480 PF00067 Cytochrome P450 YIM_27500 PF01078 Magnesium chelatase, subunit ChlI YIM_27500 PF17863 AAA lid domain YIM_27510 PF00149 Calcineurin-like phosphoesterase YIM_27520 PF04542 Sigma-70 region 2 YIM_27520 PF08281 Sigma-70, region 4 YIM_27530 PF00440 Bacterial regulatory proteins, tetR family YIM_27535 PF07690 Major Facilitator Superfamily YIM_27555 PF00486 Transcriptional regulatory protein, C terminal YIM_27555 PF00072 Response regulator receiver domain YIM_27560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_27560 PF00672 HAMP domain YIM_27560 PF00512 His Kinase A (phospho-acceptor) domain YIM_27575 PF00588 SpoU rRNA Methylase family YIM_27580 PF01494 FAD binding domain YIM_27590 PF00092 von Willebrand factor type A domain YIM_27590 PF07584 Aerotolerance regulator N-terminal YIM_27595 PF01882 Protein of unknown function DUF58 YIM_27600 PF17863 AAA lid domain YIM_27600 PF07726 ATPase family associated with various cellular activities (AAA) YIM_27605 PF12804 MobA-like NTP transferase domain YIM_27615 PF00877 NlpC/P60 family YIM_27630 PF00330 Aconitase family (aconitate hydratase) YIM_27630 PF00694 Aconitase C-terminal domain YIM_27635 PF02308 MgtC family YIM_27640 PF00561 alpha/beta hydrolase fold YIM_27645 PF10017 Histidine-specific methyltransferase, SAM-dependent YIM_27655 PF12867 DinB superfamily YIM_27655 PF03781 Sulfatase-modifying factor enzyme 1 YIM_27660 PF04107 Glutamate-cysteine ligase family 2(GCS2) YIM_27665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_27665 PF03466 LysR substrate binding domain YIM_27670 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YIM_27670 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YIM_27695 PF00440 Bacterial regulatory proteins, tetR family YIM_27700 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain YIM_27705 PF01595 Cyclin M transmembrane N-terminal domain YIM_27705 PF00571 CBS domain YIM_27705 PF03471 Transporter associated domain YIM_27710 PF01595 Cyclin M transmembrane N-terminal domain YIM_27710 PF00571 CBS domain YIM_27725 PF00248 Aldo/keto reductase family YIM_27745 PF13411 MerR HTH family regulatory protein YIM_27750 PF13977 BetI-type transcriptional repressor, C-terminal YIM_27750 PF00440 Bacterial regulatory proteins, tetR family YIM_27755 PF02577 Bifunctional nuclease YIM_27760 PF00376 MerR family regulatory protein YIM_27765 PF00498 FHA domain YIM_27770 PF01597 Glycine cleavage H-protein YIM_27790 PF00501 AMP-binding enzyme YIM_27790 PF13193 AMP-binding enzyme C-terminal domain YIM_27795 PF00378 Enoyl-CoA hydratase/isomerase YIM_27800 PF00561 alpha/beta hydrolase fold YIM_27805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_27805 PF10414 Sirohaem synthase dimerisation region YIM_27805 PF14824 Sirohaem biosynthesis protein central YIM_27810 PF00023 Ankyrin repeat YIM_27810 PF12796 Ankyrin repeats (3 copies) YIM_27820 PF01783 Ribosomal L32p protein family YIM_27825 PF01197 Ribosomal protein L31 YIM_27830 PF07683 Cobalamin synthesis protein cobW C-terminal domain YIM_27830 PF02492 CobW/HypB/UreG, nucleotide-binding domain YIM_27835 PF00830 Ribosomal L28 family YIM_27840 PF00471 Ribosomal protein L33 YIM_27845 PF00253 Ribosomal protein S14p/S29e YIM_27850 PF01084 Ribosomal protein S18 YIM_27865 PF00296 Luciferase-like monooxygenase YIM_27870 PF00282 Pyridoxal-dependent decarboxylase conserved domain YIM_27880 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal YIM_27880 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal YIM_27885 PF00296 Luciferase-like monooxygenase YIM_27900 PF00682 HMGL-like YIM_27900 PF07836 DmpG-like communication domain YIM_27905 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation YIM_27905 PF01118 Semialdehyde dehydrogenase, NAD binding domain YIM_27910 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_27920 PF00664 ABC transporter transmembrane region YIM_27920 PF00005 ABC transporter YIM_27925 PF00440 Bacterial regulatory proteins, tetR family YIM_27955 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_27955 PF00069 Protein kinase domain YIM_27980 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_27990 PF02424 ApbE family YIM_28000 PF00175 Oxidoreductase NAD-binding domain YIM_28000 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_28005 PF00486 Transcriptional regulatory protein, C terminal YIM_28005 PF00072 Response regulator receiver domain YIM_28010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_28010 PF00672 HAMP domain YIM_28010 PF00512 His Kinase A (phospho-acceptor) domain YIM_28015 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_28020 PF16123 Hydroxyacylglutathione hydrolase C-terminus YIM_28020 PF00753 Metallo-beta-lactamase superfamily YIM_28030 PF00440 Bacterial regulatory proteins, tetR family YIM_28035 PF05853 beta-keto acid cleavage enzyme YIM_28040 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_28040 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_28045 PF08402 TOBE domain YIM_28045 PF00005 ABC transporter YIM_28055 PF11975 Family 4 glycosyl hydrolase C-terminal domain YIM_28055 PF02056 Family 4 glycosyl hydrolase YIM_28060 PF00528 Binding-protein-dependent transport system inner membrane component YIM_28065 PF00528 Binding-protein-dependent transport system inner membrane component YIM_28075 PF00480 ROK family YIM_28085 PF00005 ABC transporter YIM_28085 PF16326 ABC transporter C-terminal domain YIM_28085 PF12848 ABC transporter YIM_28090 PF01022 Bacterial regulatory protein, arsR family YIM_28100 PF00561 alpha/beta hydrolase fold YIM_28110 PF04545 Sigma-70, region 4 YIM_28110 PF04542 Sigma-70 region 2 YIM_28115 PF00990 Diguanylate cyclase, GGDEF domain YIM_28115 PF07694 5TMR of 5TMR-LYT YIM_28170 PF01556 DnaJ C terminal domain YIM_28170 PF00226 DnaJ domain YIM_28170 PF00684 DnaJ central domain YIM_28175 PF03928 Haem-degrading YIM_28185 PF00291 Pyridoxal-phosphate dependent enzyme YIM_28190 PF00722 Glycosyl hydrolases family 16 YIM_28195 PF12706 Beta-lactamase superfamily domain YIM_28200 PF00582 Universal stress protein family YIM_28210 PF02735 Ku70/Ku80 beta-barrel domain YIM_28220 PF00005 ABC transporter YIM_28230 PF07730 Histidine kinase YIM_28235 PF00072 Response regulator receiver domain YIM_28235 PF00196 Bacterial regulatory proteins, luxR family YIM_28240 PF02785 Biotin carboxylase C-terminal domain YIM_28240 PF00289 Biotin carboxylase, N-terminal domain YIM_28240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_28245 PF09594 Glycosyltransferase family 87 YIM_28250 PF00072 Response regulator receiver domain YIM_28250 PF00196 Bacterial regulatory proteins, luxR family YIM_28255 PF07730 Histidine kinase YIM_28260 PF00817 impB/mucB/samB family YIM_28260 PF11799 impB/mucB/samB family C-terminal domain YIM_28285 PF00398 Ribosomal RNA adenine dimethylase YIM_28290 PF07730 Histidine kinase YIM_28290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_28295 PF00196 Bacterial regulatory proteins, luxR family YIM_28295 PF00072 Response regulator receiver domain YIM_28300 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YIM_28300 PF01409 tRNA synthetases class II core domain (F) YIM_28310 PF00561 alpha/beta hydrolase fold YIM_28325 PF02983 Alpha-lytic protease prodomain YIM_28330 PF08281 Sigma-70, region 4 YIM_28330 PF12680 SnoaL-like domain YIM_28330 PF04542 Sigma-70 region 2 YIM_28335 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain YIM_28340 PF00083 Sugar (and other) transporter YIM_28340 PF08946 Osmosensory transporter coiled coil YIM_28345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_28345 PF03466 LysR substrate binding domain YIM_28350 PF02983 Alpha-lytic protease prodomain YIM_28355 PF01425 Amidase YIM_28360 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_28385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_28385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_28385 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_28390 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) YIM_28400 PF00805 Pentapeptide repeats (8 copies) YIM_28410 PF01636 Phosphotransferase enzyme family YIM_28430 PF00005 ABC transporter YIM_28435 PF00392 Bacterial regulatory proteins, gntR family YIM_28450 PF04185 Phosphoesterase family YIM_28455 PF03704 Bacterial transcriptional activator domain YIM_28455 PF00931 NB-ARC domain YIM_28455 PF00486 Transcriptional regulatory protein, C terminal YIM_28465 PF00486 Transcriptional regulatory protein, C terminal YIM_28465 PF00931 NB-ARC domain YIM_28465 PF03704 Bacterial transcriptional activator domain YIM_28470 PF00440 Bacterial regulatory proteins, tetR family YIM_28475 PF00067 Cytochrome P450 YIM_28485 PF12399 Branched-chain amino acid ATP-binding cassette transporter YIM_28485 PF00005 ABC transporter YIM_28490 PF00005 ABC transporter YIM_28510 PF17932 Tetracyclin repressor-like, C-terminal domain YIM_28510 PF00440 Bacterial regulatory proteins, tetR family YIM_28520 PF03704 Bacterial transcriptional activator domain YIM_28520 PF00931 NB-ARC domain YIM_28520 PF00486 Transcriptional regulatory protein, C terminal YIM_28525 PF00293 NUDIX domain YIM_28560 PF01047 MarR family YIM_28565 PF00501 AMP-binding enzyme YIM_28565 PF13193 AMP-binding enzyme C-terminal domain YIM_28575 PF00480 ROK family YIM_28580 PF00528 Binding-protein-dependent transport system inner membrane component YIM_28585 PF00528 Binding-protein-dependent transport system inner membrane component YIM_28600 PF01261 Xylose isomerase-like TIM barrel YIM_28625 PF12146 Serine aminopeptidase, S33 YIM_28630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_28630 PF00512 His Kinase A (phospho-acceptor) domain YIM_28630 PF13426 PAS domain YIM_28630 PF08448 PAS fold YIM_28630 PF00072 Response regulator receiver domain YIM_28640 PF07690 Major Facilitator Superfamily YIM_28645 PF03466 LysR substrate binding domain YIM_28645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_28650 PF03600 Citrate transporter YIM_28670 PF01547 Bacterial extracellular solute-binding protein YIM_28685 PF16919 Protein kinase G rubredoxin domain YIM_28685 PF00069 Protein kinase domain YIM_28685 PF16918 Protein kinase G tetratricopeptide repeat YIM_28695 PF03793 PASTA domain YIM_28695 PF00069 Protein kinase domain YIM_28715 PF16499 Alpha galactosidase A YIM_28715 PF17801 Alpha galactosidase C-terminal beta sandwich domain YIM_28720 PF00155 Aminotransferase class I and II YIM_28735 PF00072 Response regulator receiver domain YIM_28735 PF00196 Bacterial regulatory proteins, luxR family YIM_28740 PF00931 NB-ARC domain YIM_28740 PF00486 Transcriptional regulatory protein, C terminal YIM_28740 PF03704 Bacterial transcriptional activator domain YIM_28770 PF05593 RHS Repeat YIM_28770 PF05488 PAAR motif YIM_28795 PF13362 Toprim domain YIM_28795 PF18818 Metallopeptidase superfamily domain YIM_28795 PF08401 Domain of unknown function (DUF1738) YIM_28885 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain YIM_28885 PF14490 Helix-hairpin-helix containing domain YIM_28885 PF13538 UvrD-like helicase C-terminal domain YIM_28955 PF01965 DJ-1/PfpI family YIM_28960 PF00698 Acyl transferase domain YIM_28960 PF08240 Alcohol dehydrogenase GroES-like domain YIM_28960 PF00107 Zinc-binding dehydrogenase YIM_28960 PF16197 Ketoacyl-synthetase C-terminal extension YIM_28960 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_28960 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_28960 PF08659 KR domain YIM_28960 PF00550 Phosphopantetheine attachment site YIM_28960 PF14765 Polyketide synthase dehydratase YIM_28970 PF00550 Phosphopantetheine attachment site YIM_28970 PF08659 KR domain YIM_28970 PF00698 Acyl transferase domain YIM_28970 PF08240 Alcohol dehydrogenase GroES-like domain YIM_28970 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_28970 PF08990 Erythronolide synthase docking YIM_28970 PF14765 Polyketide synthase dehydratase YIM_28970 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_28970 PF16197 Ketoacyl-synthetase C-terminal extension YIM_28975 PF00440 Bacterial regulatory proteins, tetR family YIM_28975 PF16295 Tetracyclin repressor-like, C-terminal domain YIM_28995 PF03176 MMPL family YIM_29000 PF07730 Histidine kinase YIM_29005 PF00196 Bacterial regulatory proteins, luxR family YIM_29005 PF00072 Response regulator receiver domain YIM_29025 PF00440 Bacterial regulatory proteins, tetR family YIM_29040 PF00155 Aminotransferase class I and II YIM_29045 PF00155 Aminotransferase class I and II YIM_29060 PF00072 Response regulator receiver domain YIM_29060 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_29070 PF07729 FCD domain YIM_29070 PF00392 Bacterial regulatory proteins, gntR family YIM_29075 PF01566 Natural resistance-associated macrophage protein YIM_29080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_29080 PF13378 Enolase C-terminal domain-like YIM_29085 PF00561 alpha/beta hydrolase fold YIM_29090 PF00857 Isochorismatase family YIM_29100 PF01799 [2Fe-2S] binding domain YIM_29100 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_29105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_29105 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_29110 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_29110 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_29115 PF07690 Major Facilitator Superfamily YIM_29120 PF01494 FAD binding domain YIM_29125 PF17645 Arylmalonate decarboxylase YIM_29140 PF00294 pfkB family carbohydrate kinase YIM_29150 PF03747 ADP-ribosylglycohydrolase YIM_29160 PF00106 short chain dehydrogenase YIM_29195 PF00561 alpha/beta hydrolase fold YIM_29220 PF03009 Glycerophosphoryl diester phosphodiesterase family YIM_29235 PF00005 ABC transporter YIM_29240 PF00664 ABC transporter transmembrane region YIM_29240 PF00005 ABC transporter YIM_29245 PF00296 Luciferase-like monooxygenase YIM_29250 PF13471 Transglutaminase-like superfamily YIM_29275 PF03704 Bacterial transcriptional activator domain YIM_29275 PF00486 Transcriptional regulatory protein, C terminal YIM_29275 PF00498 FHA domain YIM_29295 PF00196 Bacterial regulatory proteins, luxR family YIM_29300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_29300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_29325 PF00067 Cytochrome P450 YIM_29330 PF08240 Alcohol dehydrogenase GroES-like domain YIM_29330 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_29330 PF08659 KR domain YIM_29330 PF00698 Acyl transferase domain YIM_29330 PF00550 Phosphopantetheine attachment site YIM_29330 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_29330 PF14765 Polyketide synthase dehydratase YIM_29330 PF16197 Ketoacyl-synthetase C-terminal extension YIM_29345 PF16197 Ketoacyl-synthetase C-terminal extension YIM_29345 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_29345 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_29345 PF08659 KR domain YIM_29345 PF00698 Acyl transferase domain YIM_29345 PF00550 Phosphopantetheine attachment site YIM_29345 PF14765 Polyketide synthase dehydratase YIM_29360 PF08659 KR domain YIM_29360 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_29360 PF14765 Polyketide synthase dehydratase YIM_29360 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_29360 PF16197 Ketoacyl-synthetase C-terminal extension YIM_29360 PF08990 Erythronolide synthase docking YIM_29360 PF00550 Phosphopantetheine attachment site YIM_29360 PF00698 Acyl transferase domain YIM_29360 PF08240 Alcohol dehydrogenase GroES-like domain YIM_29375 PF14765 Polyketide synthase dehydratase YIM_29375 PF00550 Phosphopantetheine attachment site YIM_29375 PF08659 KR domain YIM_29375 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_29375 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_29375 PF16197 Ketoacyl-synthetase C-terminal extension YIM_29375 PF08240 Alcohol dehydrogenase GroES-like domain YIM_29375 PF00698 Acyl transferase domain YIM_29385 PF00067 Cytochrome P450 YIM_29395 PF00296 Luciferase-like monooxygenase YIM_29400 PF00106 short chain dehydrogenase YIM_29415 PF00884 Sulfatase YIM_29425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_29425 PF03466 LysR substrate binding domain YIM_29430 PF01872 RibD C-terminal domain YIM_29435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_29435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_29455 PF00171 Aldehyde dehydrogenase family YIM_29485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_29485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_29490 PF00326 Prolyl oligopeptidase family YIM_29495 PF00155 Aminotransferase class I and II YIM_29510 PF01507 Phosphoadenosine phosphosulfate reductase family YIM_29515 PF00009 Elongation factor Tu GTP binding domain YIM_29520 PF00891 O-methyltransferase domain YIM_29530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_29530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_29530 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_29540 PF08240 Alcohol dehydrogenase GroES-like domain YIM_29540 PF00107 Zinc-binding dehydrogenase YIM_29545 PF00501 AMP-binding enzyme YIM_29545 PF13193 AMP-binding enzyme C-terminal domain YIM_29570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_29570 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_29570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_29575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_29575 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_29575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_29595 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_29595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_29595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_29610 PF00378 Enoyl-CoA hydratase/isomerase YIM_29615 PF08946 Osmosensory transporter coiled coil YIM_29615 PF00083 Sugar (and other) transporter YIM_29645 PF00293 NUDIX domain YIM_29650 PF01425 Amidase YIM_29660 PF07993 Male sterility protein YIM_29660 PF00668 Condensation domain YIM_29660 PF00501 AMP-binding enzyme YIM_29660 PF00550 Phosphopantetheine attachment site YIM_29660 PF13193 AMP-binding enzyme C-terminal domain YIM_29730 PF05108 Type VII secretion system ESX-1, transport TM domain B YIM_29745 PF02575 YbaB/EbfC DNA-binding family YIM_29760 PF01580 FtsK/SpoIIIE family YIM_29800 PF00196 Bacterial regulatory proteins, luxR family YIM_29805 PF17866 AAA lid domain YIM_29805 PF00004 ATPase family associated with various cellular activities (AAA) YIM_29815 PF07681 DoxX YIM_29820 PF08281 Sigma-70, region 4 YIM_29820 PF04542 Sigma-70 region 2 YIM_29830 PF00226 DnaJ domain YIM_29830 PF01556 DnaJ C terminal domain YIM_29830 PF00684 DnaJ central domain YIM_29835 PF01556 DnaJ C terminal domain YIM_29835 PF00226 DnaJ domain YIM_29835 PF00684 DnaJ central domain YIM_29840 PF00011 Hsp20/alpha crystallin family YIM_29850 PF00440 Bacterial regulatory proteins, tetR family YIM_29850 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_29860 PF06441 Epoxide hydrolase N terminus YIM_29870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_29870 PF03466 LysR substrate binding domain YIM_29875 PF07730 Histidine kinase YIM_29875 PF17200 Single Cache domain 2 YIM_29885 PF01638 HxlR-like helix-turn-helix YIM_29890 PF00561 alpha/beta hydrolase fold YIM_29900 PF02515 CoA-transferase family III YIM_29905 PF00682 HMGL-like YIM_29920 PF01804 Penicillin amidase YIM_29925 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_29925 PF13378 Enolase C-terminal domain-like YIM_29935 PF07690 Major Facilitator Superfamily YIM_29940 PF00392 Bacterial regulatory proteins, gntR family YIM_29940 PF07729 FCD domain YIM_29960 PF00512 His Kinase A (phospho-acceptor) domain YIM_29960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_29960 PF00672 HAMP domain YIM_29965 PF00486 Transcriptional regulatory protein, C terminal YIM_29965 PF00072 Response regulator receiver domain YIM_29975 PF00376 MerR family regulatory protein YIM_29975 PF09278 MerR, DNA binding YIM_29980 PF03527 RHS protein YIM_29980 PF05593 RHS Repeat YIM_29980 PF14220 Domain of unknown function (DUF4329) YIM_30000 PF13382 Adenine deaminase C-terminal domain YIM_30000 PF01979 Amidohydrolase family YIM_30010 PF02779 Transketolase, pyrimidine binding domain YIM_30010 PF02780 Transketolase, C-terminal domain YIM_30015 PF00456 Transketolase, thiamine diphosphate binding domain YIM_30020 PF00392 Bacterial regulatory proteins, gntR family YIM_30020 PF07840 FadR C-terminal domain YIM_30030 PF00106 short chain dehydrogenase YIM_30040 PF07690 Major Facilitator Superfamily YIM_30040 PF00083 Sugar (and other) transporter YIM_30050 PF00741 Gas vesicle protein YIM_30060 PF00741 Gas vesicle protein YIM_30065 PF00741 Gas vesicle protein YIM_30065 PF05121 Gas vesicle protein K YIM_30070 PF00741 Gas vesicle protein YIM_30080 PF00440 Bacterial regulatory proteins, tetR family YIM_30085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YIM_30085 PF01568 Molydopterin dinucleotide binding domain YIM_30085 PF00384 Molybdopterin oxidoreductase YIM_30090 PF01323 DSBA-like thioredoxin domain YIM_30110 PF03466 LysR substrate binding domain YIM_30110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_30115 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain YIM_30115 PF00391 PEP-utilising enzyme, mobile domain YIM_30130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_30130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_30135 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_30135 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_30140 PF01799 [2Fe-2S] binding domain YIM_30140 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_30150 PF00743 Flavin-binding monooxygenase-like YIM_30155 PF07729 FCD domain YIM_30155 PF00392 Bacterial regulatory proteins, gntR family YIM_30165 PF02653 Branched-chain amino acid transport system / permease component YIM_30170 PF00005 ABC transporter YIM_30200 PF03747 ADP-ribosylglycohydrolase YIM_30205 PF13193 AMP-binding enzyme C-terminal domain YIM_30205 PF00501 AMP-binding enzyme YIM_30215 PF00440 Bacterial regulatory proteins, tetR family YIM_30220 PF12146 Serine aminopeptidase, S33 YIM_30250 PF00743 Flavin-binding monooxygenase-like YIM_30265 PF10604 Polyketide cyclase / dehydrase and lipid transport YIM_30285 PF01494 FAD binding domain YIM_30295 PF01047 MarR family YIM_30305 PF13977 BetI-type transcriptional repressor, C-terminal YIM_30305 PF00440 Bacterial regulatory proteins, tetR family YIM_30310 PF00069 Protein kinase domain YIM_30310 PF13360 PQQ-like domain YIM_30320 PF07690 Major Facilitator Superfamily YIM_30325 PF02082 Transcriptional regulator YIM_30330 PF03793 PASTA domain YIM_30330 PF00069 Protein kinase domain YIM_30345 PF00171 Aldehyde dehydrogenase family YIM_30355 PF00106 short chain dehydrogenase YIM_30385 PF00440 Bacterial regulatory proteins, tetR family YIM_30430 PF02595 Glycerate kinase family YIM_30435 PF00149 Calcineurin-like phosphoesterase YIM_30440 PF00107 Zinc-binding dehydrogenase YIM_30440 PF08240 Alcohol dehydrogenase GroES-like domain YIM_30445 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_30450 PF01614 Bacterial transcriptional regulator YIM_30450 PF09339 IclR helix-turn-helix domain YIM_30455 PF00920 Dehydratase family YIM_30480 PF00561 alpha/beta hydrolase fold YIM_30500 PF00583 Acetyltransferase (GNAT) family YIM_30530 PF08281 Sigma-70, region 4 YIM_30530 PF04542 Sigma-70 region 2 YIM_30545 PF02146 Sir2 family YIM_30550 PF00069 Protein kinase domain YIM_30560 PF00356 Bacterial regulatory proteins, lacI family YIM_30570 PF01638 HxlR-like helix-turn-helix YIM_30575 PF16320 Ribosomal protein L7/L12 dimerisation domain YIM_30575 PF00542 Ribosomal protein L7/L12 C-terminal domain YIM_30580 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_30580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_30585 PF00440 Bacterial regulatory proteins, tetR family YIM_30600 PF02558 Ketopantoate reductase PanE/ApbA YIM_30600 PF08546 Ketopantoate reductase PanE/ApbA C terminal YIM_30610 PF00083 Sugar (and other) transporter YIM_30615 PF01522 Polysaccharide deacetylase YIM_30630 PF10703 MoaF N-terminal domain YIM_30630 PF17409 MoaF C-terminal domain YIM_30650 PF00005 ABC transporter YIM_30650 PF12399 Branched-chain amino acid ATP-binding cassette transporter YIM_30655 PF00005 ABC transporter YIM_30670 PF10703 MoaF N-terminal domain YIM_30670 PF17409 MoaF C-terminal domain YIM_30675 PF13382 Adenine deaminase C-terminal domain YIM_30675 PF01979 Amidohydrolase family YIM_30680 PF00732 GMC oxidoreductase YIM_30680 PF05199 GMC oxidoreductase YIM_30685 PF00171 Aldehyde dehydrogenase family YIM_30690 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_30695 PF00392 Bacterial regulatory proteins, gntR family YIM_30695 PF07729 FCD domain YIM_30700 PF00701 Dihydrodipicolinate synthetase family YIM_30705 PF00171 Aldehyde dehydrogenase family YIM_30710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_30715 PF00891 O-methyltransferase domain YIM_30720 PF00931 NB-ARC domain YIM_30720 PF00486 Transcriptional regulatory protein, C terminal YIM_30720 PF03704 Bacterial transcriptional activator domain YIM_30725 PF08291 Peptidase M15 YIM_30725 PF01471 Putative peptidoglycan binding domain YIM_30740 PF00704 Glycosyl hydrolases family 18 YIM_30740 PF00041 Fibronectin type III domain YIM_30745 PF01965 DJ-1/PfpI family YIM_30750 PF01965 DJ-1/PfpI family YIM_30755 PF09594 Glycosyltransferase family 87 YIM_30760 PF00120 Glutamine synthetase, catalytic domain YIM_30765 PF06276 Ferric iron reductase FhuF-like transporter YIM_30765 PF04183 IucA / IucC family YIM_30770 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) YIM_30775 PF00282 Pyridoxal-dependent decarboxylase conserved domain YIM_30780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YIM_30785 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YIM_30795 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region YIM_30795 PF00326 Prolyl oligopeptidase family YIM_30800 PF03976 Polyphosphate kinase 2 (PPK2) YIM_30805 PF00202 Aminotransferase class-III YIM_30815 PF00392 Bacterial regulatory proteins, gntR family YIM_30815 PF07729 FCD domain YIM_30820 PF12848 ABC transporter YIM_30820 PF00005 ABC transporter YIM_30835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YIM_30835 PF01872 RibD C-terminal domain YIM_30840 PF08281 Sigma-70, region 4 YIM_30840 PF04542 Sigma-70 region 2 YIM_30850 PF03780 Asp23 family, cell envelope-related function YIM_30880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_30880 PF00512 His Kinase A (phospho-acceptor) domain YIM_30880 PF01627 Hpt domain YIM_30880 PF00072 Response regulator receiver domain YIM_30880 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YIM_30880 PF00672 HAMP domain YIM_30890 PF00196 Bacterial regulatory proteins, luxR family YIM_30890 PF00072 Response regulator receiver domain YIM_30895 PF04679 ATP dependent DNA ligase C terminal region YIM_30895 PF01068 ATP dependent DNA ligase domain YIM_30910 PF13298 DNA polymerase Ligase (LigD) YIM_30910 PF01068 ATP dependent DNA ligase domain YIM_30910 PF04679 ATP dependent DNA ligase C terminal region YIM_30915 PF13302 Acetyltransferase (GNAT) domain YIM_30920 PF09335 SNARE associated Golgi protein YIM_30925 PF03793 PASTA domain YIM_30925 PF00069 Protein kinase domain YIM_30945 PF01641 SelR domain YIM_30965 PF05114 Protein of unknown function (DUF692) YIM_30975 PF02515 CoA-transferase family III YIM_30995 PF01208 Uroporphyrinogen decarboxylase (URO-D) YIM_31010 PF03994 Domain of Unknown Function (DUF350) YIM_31030 PF00196 Bacterial regulatory proteins, luxR family YIM_31030 PF00072 Response regulator receiver domain YIM_31045 PF00704 Glycosyl hydrolases family 18 YIM_31045 PF00041 Fibronectin type III domain YIM_31045 PF00553 Cellulose binding domain YIM_31050 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading YIM_31050 PF18416 N-acetylglucosamine binding protein domain 2 YIM_31060 PF00108 Thiolase, N-terminal domain YIM_31060 PF02803 Thiolase, C-terminal domain YIM_31065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_31065 PF00378 Enoyl-CoA hydratase/isomerase YIM_31065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_31085 PF00512 His Kinase A (phospho-acceptor) domain YIM_31085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_31085 PF00672 HAMP domain YIM_31090 PF00072 Response regulator receiver domain YIM_31090 PF00486 Transcriptional regulatory protein, C terminal YIM_31095 PF13556 PucR C-terminal helix-turn-helix domain YIM_31105 PF00491 Arginase family YIM_31110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_31110 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_31110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_31115 PF00171 Aldehyde dehydrogenase family YIM_31135 PF04545 Sigma-70, region 4 YIM_31135 PF04539 Sigma-70 region 3 YIM_31135 PF04542 Sigma-70 region 2 YIM_31140 PF13292 1-deoxy-D-xylulose-5-phosphate synthase YIM_31140 PF02779 Transketolase, pyrimidine binding domain YIM_31140 PF02780 Transketolase, C-terminal domain YIM_31150 PF01757 Acyltransferase family YIM_31165 PF05199 GMC oxidoreductase YIM_31165 PF00732 GMC oxidoreductase YIM_31170 PF01938 TRAM domain YIM_31170 PF05958 tRNA (Uracil-5-)-methyltransferase YIM_31175 PF13520 Amino acid permease YIM_31180 PF02080 TrkA-C domain YIM_31180 PF02254 TrkA-N domain YIM_31185 PF02080 TrkA-C domain YIM_31185 PF02254 TrkA-N domain YIM_31210 PF01810 LysE type translocator YIM_31220 PF00692 dUTPase YIM_31240 PF00459 Inositol monophosphatase family YIM_31245 PF00480 ROK family YIM_31250 PF00140 Sigma-70 factor, region 1.2 YIM_31250 PF04542 Sigma-70 region 2 YIM_31250 PF04545 Sigma-70, region 4 YIM_31250 PF04539 Sigma-70 region 3 YIM_31260 PF01638 HxlR-like helix-turn-helix YIM_31265 PF00005 ABC transporter YIM_31270 PF00480 ROK family YIM_31275 PF00440 Bacterial regulatory proteins, tetR family YIM_31280 PF00067 Cytochrome P450 YIM_31290 PF11838 ERAP1-like C-terminal domain YIM_31290 PF01433 Peptidase family M1 domain YIM_31295 PF00501 AMP-binding enzyme YIM_31295 PF13193 AMP-binding enzyme C-terminal domain YIM_31295 PF00668 Condensation domain YIM_31295 PF07993 Male sterility protein YIM_31295 PF00550 Phosphopantetheine attachment site YIM_31300 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal YIM_31300 PF01926 50S ribosome-binding GTPase YIM_31320 PF00999 Sodium/hydrogen exchanger family YIM_31325 PF01042 Endoribonuclease L-PSP YIM_31330 PF00849 RNA pseudouridylate synthase YIM_31330 PF01479 S4 domain YIM_31335 PF04079 Segregation and condensation complex subunit ScpB YIM_31340 PF02616 Segregation and condensation protein ScpA YIM_31350 PF13614 AAA domain YIM_31355 PF00589 Phage integrase family YIM_31355 PF02899 Phage integrase, N-terminal SAM-like domain YIM_31370 PF06418 CTP synthase N-terminus YIM_31370 PF00117 Glutamine amidotransferase class-I YIM_31375 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YIM_31380 PF11382 Copper transport outer membrane protein, MctB YIM_31390 PF02463 RecF/RecN/SMC N terminal domain YIM_31395 PF01513 ATP-NAD kinase YIM_31400 PF01728 FtsJ-like methyltransferase YIM_31400 PF01479 S4 domain YIM_31410 PF13344 Haloacid dehalogenase-like hydrolase YIM_31410 PF18407 GCN5-related N-acetyltransferase like domain YIM_31435 PF00579 tRNA synthetases class I (W and Y) YIM_31440 PF02245 Methylpurine-DNA glycosylase (MPG) YIM_31455 PF13761 Domain of unknown function (DUF4166) YIM_31465 PF14698 Argininosuccinate lyase C-terminal YIM_31465 PF00206 Lyase YIM_31470 PF01316 Arginine repressor, DNA binding domain YIM_31470 PF02863 Arginine repressor, C-terminal domain YIM_31475 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_31475 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_31480 PF00202 Aminotransferase class-III YIM_31485 PF00696 Amino acid kinase family YIM_31490 PF01960 ArgJ family YIM_31495 PF02774 Semialdehyde dehydrogenase, dimerisation domain YIM_31495 PF01118 Semialdehyde dehydrogenase, NAD binding domain YIM_31510 PF01588 Putative tRNA binding domain YIM_31510 PF03147 Ferredoxin-fold anticodon binding domain YIM_31510 PF03484 tRNA synthetase B5 domain YIM_31510 PF03483 B3/4 domain YIM_31510 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain YIM_31515 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YIM_31515 PF01409 tRNA synthetases class II core domain (F) YIM_31520 PF00588 SpoU rRNA Methylase family YIM_31520 PF08032 RNA 2'-O ribose methyltransferase substrate binding YIM_31525 PF00453 Ribosomal protein L20 YIM_31530 PF01632 Ribosomal protein L35 YIM_31535 PF05198 Translation initiation factor IF-3, N-terminal domain YIM_31535 PF00707 Translation initiation factor IF-3, C-terminal domain YIM_31545 PF00392 Bacterial regulatory proteins, gntR family YIM_31545 PF07729 FCD domain YIM_31550 PF00291 Pyridoxal-phosphate dependent enzyme YIM_31560 PF01614 Bacterial transcriptional regulator YIM_31560 PF09339 IclR helix-turn-helix domain YIM_31565 PF00294 pfkB family carbohydrate kinase YIM_31575 PF07969 Amidohydrolase family YIM_31580 PF02447 GntP family permease YIM_31585 PF10282 Lactonase, 7-bladed beta-propeller YIM_31595 PF00528 Binding-protein-dependent transport system inner membrane component YIM_31600 PF00528 Binding-protein-dependent transport system inner membrane component YIM_31605 PF00728 Glycosyl hydrolase family 20, catalytic domain YIM_31605 PF02838 Glycosyl hydrolase family 20, domain 2 YIM_31610 PF00293 NUDIX domain YIM_31615 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_31615 PF00440 Bacterial regulatory proteins, tetR family YIM_31620 PF00144 Beta-lactamase YIM_31625 PF13399 LytR cell envelope-related transcriptional attenuator YIM_31625 PF03816 Cell envelope-related transcriptional attenuator domain YIM_31635 PF00072 Response regulator receiver domain YIM_31635 PF04703 FaeA-like protein YIM_31640 PF17203 Single cache domain 3 YIM_31640 PF00989 PAS fold YIM_31640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_31640 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain YIM_31645 PF00375 Sodium:dicarboxylate symporter family YIM_31660 PF17755 UvrA DNA-binding domain YIM_31660 PF17760 UvrA interaction domain YIM_31660 PF00005 ABC transporter YIM_31710 PF04679 ATP dependent DNA ligase C terminal region YIM_31710 PF13298 DNA polymerase Ligase (LigD) YIM_31710 PF01068 ATP dependent DNA ligase domain YIM_31730 PF01022 Bacterial regulatory protein, arsR family YIM_31740 PF00005 ABC transporter YIM_31745 PF00528 Binding-protein-dependent transport system inner membrane component YIM_31750 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_31765 PF00703 Glycosyl hydrolases family 2 YIM_31765 PF02837 Glycosyl hydrolases family 2, sugar binding domain YIM_31765 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain YIM_31785 PF13460 NAD(P)H-binding YIM_31785 PF11066 Protein of unknown function (DUF2867) YIM_31790 PF13291 ACT domain YIM_31790 PF00291 Pyridoxal-phosphate dependent enzyme YIM_31795 PF12833 Helix-turn-helix domain YIM_31810 PF00248 Aldo/keto reductase family YIM_31815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YIM_31815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_31825 PF00356 Bacterial regulatory proteins, lacI family YIM_31830 PF13407 Periplasmic binding protein domain YIM_31835 PF02653 Branched-chain amino acid transport system / permease component YIM_31840 PF00005 ABC transporter YIM_31865 PF07676 WD40-like Beta Propeller Repeat YIM_31865 PF00326 Prolyl oligopeptidase family YIM_31870 PF03741 Integral membrane protein TerC family YIM_31875 PF00005 ABC transporter YIM_31885 PF05576 PS-10 peptidase S37 YIM_31895 PF00271 Helicase conserved C-terminal domain YIM_31895 PF04851 Type III restriction enzyme, res subunit YIM_31895 PF02151 UvrB/uvrC motif YIM_31895 PF12344 Ultra-violet resistance protein B YIM_31895 PF17757 UvrB interaction domain YIM_31915 PF04493 Endonuclease V YIM_31920 PF00005 ABC transporter YIM_31935 PF07730 Histidine kinase YIM_31940 PF00072 Response regulator receiver domain YIM_31940 PF00196 Bacterial regulatory proteins, luxR family YIM_31945 PF01121 Dephospho-CoA kinase YIM_31945 PF04229 GrpB protein YIM_31960 PF08659 KR domain YIM_31960 PF00698 Acyl transferase domain YIM_31960 PF00550 Phosphopantetheine attachment site YIM_31960 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_31960 PF16197 Ketoacyl-synthetase C-terminal extension YIM_31960 PF08240 Alcohol dehydrogenase GroES-like domain YIM_31960 PF00107 Zinc-binding dehydrogenase YIM_31960 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_31960 PF14765 Polyketide synthase dehydratase YIM_31965 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_31965 PF16197 Ketoacyl-synthetase C-terminal extension YIM_31965 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_31965 PF08659 KR domain YIM_31965 PF00550 Phosphopantetheine attachment site YIM_31965 PF14765 Polyketide synthase dehydratase YIM_31965 PF00698 Acyl transferase domain YIM_31970 PF00550 Phosphopantetheine attachment site YIM_31975 PF00561 alpha/beta hydrolase fold YIM_31980 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase YIM_31995 PF00575 S1 RNA binding domain YIM_32000 PF01209 ubiE/COQ5 methyltransferase family YIM_32040 PF00149 Calcineurin-like phosphoesterase YIM_32060 PF01367 5'-3' exonuclease, C-terminal SAM fold YIM_32060 PF00476 DNA polymerase family A YIM_32060 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YIM_32065 PF03061 Thioesterase superfamily YIM_32070 PF03466 LysR substrate binding domain YIM_32070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_32080 PF00005 ABC transporter YIM_32085 PF12399 Branched-chain amino acid ATP-binding cassette transporter YIM_32085 PF00005 ABC transporter YIM_32095 PF02653 Branched-chain amino acid transport system / permease component YIM_32100 PF13458 Periplasmic binding protein YIM_32105 PF00072 Response regulator receiver domain YIM_32105 PF03861 ANTAR domain YIM_32115 PF00589 Phage integrase family YIM_32115 PF14659 Phage integrase, N-terminal SAM-like domain YIM_32160 PF01580 FtsK/SpoIIIE family YIM_32160 PF09397 Ftsk gamma domain YIM_32160 PF17854 FtsK alpha domain YIM_32160 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YIM_32215 PF00067 Cytochrome P450 YIM_32235 PF00753 Metallo-beta-lactamase superfamily YIM_32240 PF00135 Carboxylesterase family YIM_32255 PF00378 Enoyl-CoA hydratase/isomerase YIM_32295 PF00975 Thioesterase domain YIM_32295 PF00550 Phosphopantetheine attachment site YIM_32295 PF00501 AMP-binding enzyme YIM_32295 PF13193 AMP-binding enzyme C-terminal domain YIM_32295 PF00668 Condensation domain YIM_32305 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YIM_32315 PF00550 Phosphopantetheine attachment site YIM_32315 PF00501 AMP-binding enzyme YIM_32315 PF13193 AMP-binding enzyme C-terminal domain YIM_32315 PF00668 Condensation domain YIM_32325 PF00291 Pyridoxal-phosphate dependent enzyme YIM_32335 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_32335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_32335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_32340 PF00501 AMP-binding enzyme YIM_32350 PF00550 Phosphopantetheine attachment site YIM_32350 PF00501 AMP-binding enzyme YIM_32350 PF00668 Condensation domain YIM_32350 PF13193 AMP-binding enzyme C-terminal domain YIM_32355 PF00486 Transcriptional regulatory protein, C terminal YIM_32355 PF00931 NB-ARC domain YIM_32355 PF03704 Bacterial transcriptional activator domain YIM_32360 PF00291 Pyridoxal-phosphate dependent enzyme YIM_32365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YIM_32365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YIM_32370 PF00501 AMP-binding enzyme YIM_32370 PF00668 Condensation domain YIM_32370 PF00550 Phosphopantetheine attachment site YIM_32370 PF00975 Thioesterase domain YIM_32370 PF13193 AMP-binding enzyme C-terminal domain YIM_32375 PF02423 Ornithine cyclodeaminase/mu-crystallin family YIM_32380 PF00668 Condensation domain YIM_32380 PF13193 AMP-binding enzyme C-terminal domain YIM_32380 PF00550 Phosphopantetheine attachment site YIM_32380 PF00501 AMP-binding enzyme YIM_32380 PF00975 Thioesterase domain YIM_32405 PF03527 RHS protein YIM_32405 PF05593 RHS Repeat YIM_32435 PF00294 pfkB family carbohydrate kinase YIM_32440 PF00107 Zinc-binding dehydrogenase YIM_32440 PF08240 Alcohol dehydrogenase GroES-like domain YIM_32445 PF00083 Sugar (and other) transporter YIM_32445 PF07690 Major Facilitator Superfamily YIM_32450 PF08125 Mannitol dehydrogenase C-terminal domain YIM_32450 PF01232 Mannitol dehydrogenase Rossmann domain YIM_32455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_32455 PF13378 Enolase C-terminal domain-like YIM_32460 PF00392 Bacterial regulatory proteins, gntR family YIM_32460 PF07729 FCD domain YIM_32470 PF01638 HxlR-like helix-turn-helix YIM_32480 PF00561 alpha/beta hydrolase fold YIM_32490 PF00534 Glycosyl transferases group 1 YIM_32490 PF13439 Glycosyltransferase Family 4 YIM_32495 PF08241 Methyltransferase domain YIM_32510 PF00356 Bacterial regulatory proteins, lacI family YIM_32515 PF08244 Glycosyl hydrolases family 32 C terminal YIM_32515 PF00251 Glycosyl hydrolases family 32 N-terminal domain YIM_32535 PF00005 ABC transporter YIM_32540 PF00528 Binding-protein-dependent transport system inner membrane component YIM_32560 PF03737 Aldolase/RraA YIM_32565 PF00528 Binding-protein-dependent transport system inner membrane component YIM_32575 PF07729 FCD domain YIM_32575 PF00392 Bacterial regulatory proteins, gntR family YIM_32580 PF13378 Enolase C-terminal domain-like YIM_32580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_32585 PF01047 MarR family YIM_32590 PF00106 short chain dehydrogenase YIM_32595 PF04909 Amidohydrolase YIM_32600 PF00356 Bacterial regulatory proteins, lacI family YIM_32605 PF00232 Glycosyl hydrolase family 1 YIM_32610 PF02836 Glycosyl hydrolases family 2, TIM barrel domain YIM_32610 PF02837 Glycosyl hydrolases family 2, sugar binding domain YIM_32610 PF00703 Glycosyl hydrolases family 2 YIM_32615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_32620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_32630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_32630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_32635 PF00528 Binding-protein-dependent transport system inner membrane component YIM_32640 PF00005 ABC transporter YIM_32640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_32645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_32645 PF00005 ABC transporter YIM_32670 PF00356 Bacterial regulatory proteins, lacI family YIM_32675 PF18370 Rhamnogalacturonan I lyases beta-sheet domain YIM_32680 PF16990 Carbohydrate binding module (family 35) YIM_32680 PF00703 Glycosyl hydrolases family 2 YIM_32680 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain YIM_32680 PF02837 Glycosyl hydrolases family 2, sugar binding domain YIM_32690 PF00528 Binding-protein-dependent transport system inner membrane component YIM_32695 PF00528 Binding-protein-dependent transport system inner membrane component YIM_32705 PF00553 Cellulose binding domain YIM_32705 PF01341 Glycosyl hydrolases family 6 YIM_32770 PF00561 alpha/beta hydrolase fold YIM_32775 PF07730 Histidine kinase YIM_32780 PF00196 Bacterial regulatory proteins, luxR family YIM_32780 PF00072 Response regulator receiver domain YIM_32790 PF00501 AMP-binding enzyme YIM_32790 PF13193 AMP-binding enzyme C-terminal domain YIM_32795 PF13185 GAF domain YIM_32795 PF00196 Bacterial regulatory proteins, luxR family YIM_32810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_32815 PF00232 Glycosyl hydrolase family 1 YIM_32820 PF00528 Binding-protein-dependent transport system inner membrane component YIM_32825 PF00005 ABC transporter YIM_32825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_32830 PF00005 ABC transporter YIM_32830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_32835 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_32845 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal YIM_32845 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YIM_32845 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YIM_32850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YIM_32850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YIM_32855 PF01061 ABC-2 type transporter YIM_32860 PF00005 ABC transporter YIM_32860 PF13732 Domain of unknown function (DUF4162) YIM_32865 PF14525 AraC-binding-like domain YIM_32865 PF12833 Helix-turn-helix domain YIM_32870 PF00931 NB-ARC domain YIM_32870 PF03704 Bacterial transcriptional activator domain YIM_32870 PF00486 Transcriptional regulatory protein, C terminal YIM_32890 PF04542 Sigma-70 region 2 YIM_32890 PF08281 Sigma-70, region 4 YIM_32890 PF12680 SnoaL-like domain YIM_32905 PF12680 SnoaL-like domain YIM_32905 PF08281 Sigma-70, region 4 YIM_32905 PF04542 Sigma-70 region 2 YIM_32910 PF07859 alpha/beta hydrolase fold YIM_32915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_32915 PF03466 LysR substrate binding domain YIM_32935 PF00004 ATPase family associated with various cellular activities (AAA) YIM_32935 PF01434 Peptidase family M41 YIM_32935 PF06480 FtsH Extracellular YIM_32935 PF17862 AAA+ lid domain YIM_32940 PF16197 Ketoacyl-synthetase C-terminal extension YIM_32940 PF08240 Alcohol dehydrogenase GroES-like domain YIM_32940 PF14765 Polyketide synthase dehydratase YIM_32940 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_32940 PF00698 Acyl transferase domain YIM_32940 PF08659 KR domain YIM_32940 PF00550 Phosphopantetheine attachment site YIM_32940 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_32945 PF09278 MerR, DNA binding YIM_32945 PF00376 MerR family regulatory protein YIM_32960 PF00400 WD domain, G-beta repeat YIM_32960 PF12894 Anaphase-promoting complex subunit 4 WD40 domain YIM_32975 PF02627 Carboxymuconolactone decarboxylase family YIM_32980 PF13411 MerR HTH family regulatory protein YIM_32995 PF00440 Bacterial regulatory proteins, tetR family YIM_33000 PF00356 Bacterial regulatory proteins, lacI family YIM_33005 PF00701 Dihydrodipicolinate synthetase family YIM_33010 PF01566 Natural resistance-associated macrophage protein YIM_33020 PF00144 Beta-lactamase YIM_33025 PF13649 Methyltransferase domain YIM_33035 PF00391 PEP-utilising enzyme, mobile domain YIM_33035 PF05524 PEP-utilising enzyme, N-terminal YIM_33035 PF02896 PEP-utilising enzyme, TIM barrel domain YIM_33040 PF04198 Putative sugar-binding domain YIM_33045 PF00381 PTS HPr component phosphorylation site YIM_33050 PF03608 PTS system enzyme II sorbitol-specific factor YIM_33055 PF07663 Sorbitol phosphotransferase enzyme II C-terminus YIM_33055 PF03612 Sorbitol phosphotransferase enzyme II N-terminus YIM_33075 PF00676 Dehydrogenase E1 component YIM_33080 PF00364 Biotin-requiring enzyme YIM_33080 PF02780 Transketolase, C-terminal domain YIM_33080 PF02779 Transketolase, pyrimidine binding domain YIM_33085 PF02817 e3 binding domain YIM_33085 PF00364 Biotin-requiring enzyme YIM_33085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_33090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YIM_33120 PF08240 Alcohol dehydrogenase GroES-like domain YIM_33120 PF13823 Alcohol dehydrogenase GroES-associated YIM_33120 PF00107 Zinc-binding dehydrogenase YIM_33130 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_33130 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_33135 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_33135 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_33140 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_33140 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_33140 PF01799 [2Fe-2S] binding domain YIM_33145 PF07690 Major Facilitator Superfamily YIM_33150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_33150 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_33150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_33160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_33160 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_33160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_33165 PF00378 Enoyl-CoA hydratase/isomerase YIM_33170 PF00501 AMP-binding enzyme YIM_33170 PF13193 AMP-binding enzyme C-terminal domain YIM_33175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_33175 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_33175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_33185 PF00108 Thiolase, N-terminal domain YIM_33185 PF02803 Thiolase, C-terminal domain YIM_33190 PF00296 Luciferase-like monooxygenase YIM_33195 PF03060 Nitronate monooxygenase YIM_33205 PF01144 Coenzyme A transferase YIM_33210 PF00378 Enoyl-CoA hydratase/isomerase YIM_33215 PF00106 short chain dehydrogenase YIM_33240 PF00440 Bacterial regulatory proteins, tetR family YIM_33240 PF17932 Tetracyclin repressor-like, C-terminal domain YIM_33250 PF00440 Bacterial regulatory proteins, tetR family YIM_33260 PF08240 Alcohol dehydrogenase GroES-like domain YIM_33260 PF00107 Zinc-binding dehydrogenase YIM_33265 PF12697 Alpha/beta hydrolase family YIM_33275 PF00196 Bacterial regulatory proteins, luxR family YIM_33290 PF00480 ROK family YIM_33295 PF07350 Protein of unknown function (DUF1479) YIM_33320 PF00990 Diguanylate cyclase, GGDEF domain YIM_33325 PF17754 MftR C-terminal domain YIM_33325 PF00440 Bacterial regulatory proteins, tetR family YIM_33330 PF00135 Carboxylesterase family YIM_33335 PF07690 Major Facilitator Superfamily YIM_33365 PF00005 ABC transporter YIM_33365 PF13732 Domain of unknown function (DUF4162) YIM_33375 PF08241 Methyltransferase domain YIM_33380 PF00444 Ribosomal protein L36 YIM_33385 PF01497 Periplasmic binding protein YIM_33390 PF01032 FecCD transport family YIM_33395 PF01032 FecCD transport family YIM_33400 PF00005 ABC transporter YIM_33405 PF00571 CBS domain YIM_33410 PF00171 Aldehyde dehydrogenase family YIM_33415 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YIM_33415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YIM_33415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YIM_33420 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YIM_33430 PF01467 Cytidylyltransferase-like YIM_33430 PF00294 pfkB family carbohydrate kinase YIM_33435 PF13580 SIS domain YIM_33450 PF02543 Carbamoyltransferase N-terminus YIM_33450 PF16861 Carbamoyltransferase C-terminus YIM_33455 PF00534 Glycosyl transferases group 1 YIM_33455 PF13439 Glycosyltransferase Family 4 YIM_33465 PF00535 Glycosyl transferase family 2 YIM_33470 PF00535 Glycosyl transferase family 2 YIM_33480 PF16363 GDP-mannose 4,6 dehydratase YIM_33485 PF05175 Methyltransferase small domain YIM_33485 PF17827 PrmC N-terminal domain YIM_33510 PF05067 Manganese containing catalase YIM_33515 PF16363 GDP-mannose 4,6 dehydratase YIM_33535 PF00106 short chain dehydrogenase YIM_33545 PF00113 Enolase, C-terminal TIM barrel domain YIM_33545 PF03952 Enolase, N-terminal domain YIM_33555 PF04075 F420H(2)-dependent quinone reductase YIM_33585 PF00106 short chain dehydrogenase YIM_33590 PF00069 Protein kinase domain YIM_33595 PF07883 Cupin domain YIM_33595 PF05899 Protein of unknown function (DUF861) YIM_33600 PF13556 PucR C-terminal helix-turn-helix domain YIM_33600 PF05651 Putative sugar diacid recognition YIM_33600 PF17853 GGDEF-like domain YIM_33605 PF00501 AMP-binding enzyme YIM_33605 PF13193 AMP-binding enzyme C-terminal domain YIM_33630 PF08659 KR domain YIM_33630 PF00550 Phosphopantetheine attachment site YIM_33630 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_33630 PF14765 Polyketide synthase dehydratase YIM_33630 PF00698 Acyl transferase domain YIM_33630 PF16197 Ketoacyl-synthetase C-terminal extension YIM_33630 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_33635 PF00501 AMP-binding enzyme YIM_33645 PF07690 Major Facilitator Superfamily YIM_33650 PF03176 MMPL family YIM_33665 PF01738 Dienelactone hydrolase family YIM_33715 PF00144 Beta-lactamase YIM_33720 PF12706 Beta-lactamase superfamily domain YIM_33720 PF00753 Metallo-beta-lactamase superfamily YIM_33735 PF01494 FAD binding domain YIM_33740 PF08359 YsiA-like protein, C-terminal region YIM_33740 PF00440 Bacterial regulatory proteins, tetR family YIM_33750 PF00144 Beta-lactamase YIM_33755 PF00005 ABC transporter YIM_33795 PF13530 Sterol carrier protein domain YIM_33795 PF17668 Acetyltransferase (GNAT) domain YIM_33810 PF00931 NB-ARC domain YIM_33810 PF00486 Transcriptional regulatory protein, C terminal YIM_33810 PF03704 Bacterial transcriptional activator domain YIM_33845 PF01594 AI-2E family transporter YIM_33850 PF03176 MMPL family YIM_33860 PF00186 Dihydrofolate reductase YIM_33865 PF00303 Thymidylate synthase YIM_33870 PF07690 Major Facilitator Superfamily YIM_33895 PF17933 Tetracyclin repressor-like, C-terminal domain YIM_33895 PF00440 Bacterial regulatory proteins, tetR family YIM_33910 PF00486 Transcriptional regulatory protein, C terminal YIM_33910 PF00931 NB-ARC domain YIM_33910 PF03704 Bacterial transcriptional activator domain YIM_33920 PF06441 Epoxide hydrolase N terminus YIM_33925 PF13411 MerR HTH family regulatory protein YIM_33935 PF11987 Translation-initiation factor 2 YIM_33935 PF04760 Translation initiation factor IF-2, N-terminal region YIM_33935 PF00009 Elongation factor Tu GTP binding domain YIM_33955 PF17862 AAA+ lid domain YIM_33955 PF00004 ATPase family associated with various cellular activities (AAA) YIM_33955 PF06480 FtsH Extracellular YIM_33955 PF01434 Peptidase family M41 YIM_33980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_33980 PF07730 Histidine kinase YIM_33985 PF00072 Response regulator receiver domain YIM_33985 PF00196 Bacterial regulatory proteins, luxR family YIM_33990 PF12697 Alpha/beta hydrolase family YIM_33995 PF01070 FMN-dependent dehydrogenase YIM_34005 PF13411 MerR HTH family regulatory protein YIM_34005 PF07739 TipAS antibiotic-recognition domain YIM_34015 PF08031 Berberine and berberine like YIM_34015 PF01565 FAD binding domain YIM_34020 PF00392 Bacterial regulatory proteins, gntR family YIM_34030 PF04978 Protein of unknown function (DUF664) YIM_34035 PF00561 alpha/beta hydrolase fold YIM_34050 PF00144 Beta-lactamase YIM_34070 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_34070 PF00440 Bacterial regulatory proteins, tetR family YIM_34075 PF13847 Methyltransferase domain YIM_34090 PF01336 OB-fold nucleic acid binding domain YIM_34090 PF14579 Helix-hairpin-helix motif YIM_34090 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YIM_34090 PF07733 Bacterial DNA polymerase III alpha NTPase domain YIM_34090 PF02811 PHP domain YIM_34105 PF07730 Histidine kinase YIM_34105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_34110 PF00072 Response regulator receiver domain YIM_34110 PF00196 Bacterial regulatory proteins, luxR family YIM_34130 PF07690 Major Facilitator Superfamily YIM_34135 PF00196 Bacterial regulatory proteins, luxR family YIM_34145 PF05139 Erythromycin esterase YIM_34155 PF00144 Beta-lactamase YIM_34160 PF04542 Sigma-70 region 2 YIM_34160 PF12680 SnoaL-like domain YIM_34160 PF08281 Sigma-70, region 4 YIM_34165 PF14759 Reductase C-terminal YIM_34165 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_34185 PF00848 Ring hydroxylating alpha subunit (catalytic domain) YIM_34185 PF00355 Rieske [2Fe-2S] domain YIM_34200 PF08240 Alcohol dehydrogenase GroES-like domain YIM_34200 PF00107 Zinc-binding dehydrogenase YIM_34210 PF00135 Carboxylesterase family YIM_34225 PF07690 Major Facilitator Superfamily YIM_34235 PF01757 Acyltransferase family YIM_34245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_34245 PF00512 His Kinase A (phospho-acceptor) domain YIM_34245 PF00672 HAMP domain YIM_34250 PF00072 Response regulator receiver domain YIM_34250 PF00486 Transcriptional regulatory protein, C terminal YIM_34265 PF12833 Helix-turn-helix domain YIM_34265 PF01965 DJ-1/PfpI family YIM_34270 PF01494 FAD binding domain YIM_34275 PF00440 Bacterial regulatory proteins, tetR family YIM_34285 PF13977 BetI-type transcriptional repressor, C-terminal YIM_34285 PF00440 Bacterial regulatory proteins, tetR family YIM_34295 PF00326 Prolyl oligopeptidase family YIM_34305 PF01638 HxlR-like helix-turn-helix YIM_34310 PF00296 Luciferase-like monooxygenase YIM_34340 PF00144 Beta-lactamase YIM_34350 PF12833 Helix-turn-helix domain YIM_34350 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YIM_34360 PF07969 Amidohydrolase family YIM_34365 PF00083 Sugar (and other) transporter YIM_34375 PF10503 Esterase PHB depolymerase YIM_34380 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_34380 PF17996 Carbohydrate esterase 2 N-terminal YIM_34400 PF03466 LysR substrate binding domain YIM_34400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_34410 PF13199 Glycosyl hydrolase family 66 YIM_34410 PF03422 Carbohydrate binding module (family 6) YIM_34410 PF16990 Carbohydrate binding module (family 35) YIM_34435 PF08659 KR domain YIM_34435 PF14765 Polyketide synthase dehydratase YIM_34435 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_34435 PF00550 Phosphopantetheine attachment site YIM_34435 PF08240 Alcohol dehydrogenase GroES-like domain YIM_34435 PF08990 Erythronolide synthase docking YIM_34435 PF16197 Ketoacyl-synthetase C-terminal extension YIM_34435 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_34435 PF00698 Acyl transferase domain YIM_34450 PF00005 ABC transporter YIM_34450 PF13732 Domain of unknown function (DUF4162) YIM_34470 PF00486 Transcriptional regulatory protein, C terminal YIM_34470 PF00931 NB-ARC domain YIM_34470 PF03704 Bacterial transcriptional activator domain YIM_34495 PF02627 Carboxymuconolactone decarboxylase family YIM_34500 PF04542 Sigma-70 region 2 YIM_34500 PF08281 Sigma-70, region 4 YIM_34510 PF00999 Sodium/hydrogen exchanger family YIM_34540 PF07729 FCD domain YIM_34540 PF00392 Bacterial regulatory proteins, gntR family YIM_34545 PF00202 Aminotransferase class-III YIM_34550 PF00440 Bacterial regulatory proteins, tetR family YIM_34550 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_34575 PF03551 Transcriptional regulator PadR-like family YIM_34585 PF00324 Amino acid permease YIM_34590 PF00486 Transcriptional regulatory protein, C terminal YIM_34590 PF00072 Response regulator receiver domain YIM_34595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_34595 PF00672 HAMP domain YIM_34595 PF00512 His Kinase A (phospho-acceptor) domain YIM_34620 PF00440 Bacterial regulatory proteins, tetR family YIM_34625 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) YIM_34645 PF07859 alpha/beta hydrolase fold YIM_34650 PF00664 ABC transporter transmembrane region YIM_34650 PF04954 Siderophore-interacting protein YIM_34650 PF00005 ABC transporter YIM_34650 PF08021 Siderophore-interacting FAD-binding domain YIM_34655 PF00005 ABC transporter YIM_34670 PF00440 Bacterial regulatory proteins, tetR family YIM_34695 PF01580 FtsK/SpoIIIE family YIM_34700 PF01494 FAD binding domain YIM_34710 PF01494 FAD binding domain YIM_34715 PF01734 Patatin-like phospholipase YIM_34735 PF00892 EamA-like transporter family YIM_34740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_34740 PF03466 LysR substrate binding domain YIM_34755 PF03704 Bacterial transcriptional activator domain YIM_34755 PF00931 NB-ARC domain YIM_34755 PF00486 Transcriptional regulatory protein, C terminal YIM_34765 PF00005 ABC transporter YIM_34775 PF07687 Peptidase dimerisation domain YIM_34775 PF01546 Peptidase family M20/M25/M40 YIM_34790 PF03527 RHS protein YIM_34790 PF05593 RHS Repeat YIM_34815 PF00512 His Kinase A (phospho-acceptor) domain YIM_34815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_34815 PF00672 HAMP domain YIM_34820 PF00072 Response regulator receiver domain YIM_34820 PF00486 Transcriptional regulatory protein, C terminal YIM_34825 PF07690 Major Facilitator Superfamily YIM_34835 PF00682 HMGL-like YIM_34840 PF00378 Enoyl-CoA hydratase/isomerase YIM_34845 PF02515 CoA-transferase family III YIM_34850 PF00378 Enoyl-CoA hydratase/isomerase YIM_34855 PF00501 AMP-binding enzyme YIM_34855 PF13193 AMP-binding enzyme C-terminal domain YIM_34860 PF03060 Nitronate monooxygenase YIM_34880 PF01979 Amidohydrolase family YIM_34900 PF00005 ABC transporter YIM_34905 PF12399 Branched-chain amino acid ATP-binding cassette transporter YIM_34905 PF00005 ABC transporter YIM_34915 PF02653 Branched-chain amino acid transport system / permease component YIM_34920 PF13458 Periplasmic binding protein YIM_34925 PF02515 CoA-transferase family III YIM_34930 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_34940 PF03972 MmgE/PrpD family YIM_34950 PF06722 Protein of unknown function (DUF1205) YIM_34965 PF00356 Bacterial regulatory proteins, lacI family YIM_34970 PF00544 Pectate lyase YIM_34980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_34985 PF00528 Binding-protein-dependent transport system inner membrane component YIM_34990 PF00528 Binding-protein-dependent transport system inner membrane component YIM_35000 PF02082 Transcriptional regulator YIM_35005 PF08281 Sigma-70, region 4 YIM_35005 PF04542 Sigma-70 region 2 YIM_35045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_35045 PF03466 LysR substrate binding domain YIM_35060 PF01965 DJ-1/PfpI family YIM_35065 PF00583 Acetyltransferase (GNAT) family YIM_35070 PF00574 Clp protease YIM_35080 PF00440 Bacterial regulatory proteins, tetR family YIM_35085 PF08448 PAS fold YIM_35085 PF00990 Diguanylate cyclase, GGDEF domain YIM_35085 PF00563 EAL domain YIM_35085 PF08447 PAS fold YIM_35095 PF00067 Cytochrome P450 YIM_35120 PF01494 FAD binding domain YIM_35125 PF09339 IclR helix-turn-helix domain YIM_35125 PF01614 Bacterial transcriptional regulator YIM_35135 PF08281 Sigma-70, region 4 YIM_35135 PF04542 Sigma-70 region 2 YIM_35150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_35155 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_35190 PF10518 TAT (twin-arginine translocation) pathway signal sequence YIM_35190 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_35190 PF01799 [2Fe-2S] binding domain YIM_35195 PF03450 CO dehydrogenase flavoprotein C-terminal domain YIM_35195 PF00941 FAD binding domain in molybdopterin dehydrogenase YIM_35205 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YIM_35205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase YIM_35215 PF04978 Protein of unknown function (DUF664) YIM_35220 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase YIM_35245 PF03965 Penicillinase repressor YIM_35260 PF00392 Bacterial regulatory proteins, gntR family YIM_35280 PF08240 Alcohol dehydrogenase GroES-like domain YIM_35280 PF00107 Zinc-binding dehydrogenase YIM_35285 PF00561 alpha/beta hydrolase fold YIM_35285 PF00364 Biotin-requiring enzyme YIM_35290 PF02779 Transketolase, pyrimidine binding domain YIM_35290 PF02780 Transketolase, C-terminal domain YIM_35295 PF00676 Dehydrogenase E1 component YIM_35300 PF01513 ATP-NAD kinase YIM_35305 PF00106 short chain dehydrogenase YIM_35330 PF09382 RQC domain YIM_35330 PF16124 RecQ zinc-binding YIM_35330 PF00570 HRDC domain YIM_35330 PF00270 DEAD/DEAH box helicase YIM_35330 PF00271 Helicase conserved C-terminal domain YIM_35335 PF17678 Glycosyl hydrolase family 92 N-terminal domain YIM_35335 PF07971 Glycosyl hydrolase family 92 YIM_35355 PF00664 ABC transporter transmembrane region YIM_35355 PF00005 ABC transporter YIM_35360 PF00664 ABC transporter transmembrane region YIM_35360 PF00005 ABC transporter YIM_35370 PF00291 Pyridoxal-phosphate dependent enzyme YIM_35380 PF00005 ABC transporter YIM_35385 PF01032 FecCD transport family YIM_35390 PF13649 Methyltransferase domain YIM_35400 PF13977 BetI-type transcriptional repressor, C-terminal YIM_35400 PF00440 Bacterial regulatory proteins, tetR family YIM_35405 PF00364 Biotin-requiring enzyme YIM_35405 PF02817 e3 binding domain YIM_35405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_35410 PF02779 Transketolase, pyrimidine binding domain YIM_35410 PF02780 Transketolase, C-terminal domain YIM_35415 PF00676 Dehydrogenase E1 component YIM_35420 PF13404 AsnC-type helix-turn-helix domain YIM_35420 PF01037 Lrp/AsnC ligand binding domain YIM_35430 PF00106 short chain dehydrogenase YIM_35440 PF00809 Pterin binding enzyme YIM_35445 PF06974 Protein of unknown function (DUF1298) YIM_35445 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain YIM_35450 PF00561 alpha/beta hydrolase fold YIM_35465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YIM_35465 PF07685 CobB/CobQ-like glutamine amidotransferase domain YIM_35470 PF03186 CobD/Cbib protein YIM_35475 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase YIM_35480 PF02277 Phosphoribosyltransferase YIM_35485 PF02654 Cobalamin-5-phosphate synthase YIM_35495 PF00155 Aminotransferase class I and II YIM_35500 PF07685 CobB/CobQ-like glutamine amidotransferase domain YIM_35500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YIM_35510 PF13519 von Willebrand factor type A domain YIM_35510 PF07728 AAA domain (dynein-related subfamily) YIM_35510 PF17863 AAA lid domain YIM_35515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_35520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_35530 PF02571 Precorrin-6x reductase CbiJ/CobK YIM_35535 PF04602 Mycobacterial cell wall arabinan synthesis protein YIM_35535 PF17689 Arabinosyltransferase concanavalin like domain YIM_35535 PF14896 EmbC C-terminal domain YIM_35540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_35545 PF02570 Precorrin-8X methylmutase YIM_35550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YIM_35550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_35555 PF00005 ABC transporter YIM_35565 PF01381 Helix-turn-helix YIM_35575 PF02514 CobN/Magnesium Chelatase YIM_35600 PF01022 Bacterial regulatory protein, arsR family YIM_35605 PF13419 Haloacid dehalogenase-like hydrolase YIM_35610 PF03632 Glycosyl hydrolase family 65 central catalytic domain YIM_35610 PF03633 Glycosyl hydrolase family 65, C-terminal domain YIM_35610 PF03636 Glycosyl hydrolase family 65, N-terminal domain YIM_35625 PF02541 Ppx/GppA phosphatase family YIM_35640 PF03717 Penicillin-binding Protein dimerisation domain YIM_35640 PF00905 Penicillin binding protein transpeptidase domain YIM_35650 PF01795 MraW methylase family YIM_35655 PF02381 MraZ protein, putative antitoxin-like YIM_35680 PF07726 ATPase family associated with various cellular activities (AAA) YIM_35680 PF17863 AAA lid domain YIM_35690 PF11992 Domain of unknown function (DUF3488) YIM_35690 PF01841 Transglutaminase-like superfamily YIM_35690 PF13559 Domain of unknown function (DUF4129) YIM_35705 PF00891 O-methyltransferase domain YIM_35710 PF10609 NUBPL iron-transfer P-loop NTPase YIM_35710 PF01883 Iron-sulfur cluster assembly protein YIM_35715 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YIM_35715 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YIM_35720 PF00962 Adenosine/AMP deaminase YIM_35725 PF13302 Acetyltransferase (GNAT) domain YIM_35730 PF01180 Dihydroorotate dehydrogenase YIM_35755 PF18146 Damage-inducible protein CinA KH domain YIM_35755 PF00994 Probable molybdopterin binding domain YIM_35755 PF02464 Competence-damaged protein YIM_35765 PF18693 TRAM domain YIM_35765 PF00919 Uncharacterized protein family UPF0004 YIM_35765 PF04055 Radical SAM superfamily YIM_35770 PF00583 Acetyltransferase (GNAT) family YIM_35790 PF00881 Nitroreductase family YIM_35795 PF09397 Ftsk gamma domain YIM_35795 PF01580 FtsK/SpoIIIE family YIM_35795 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YIM_35795 PF17854 FtsK alpha domain YIM_35805 PF00892 EamA-like transporter family YIM_35820 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain YIM_35820 PF17770 Ribonuclease J C-terminal domain YIM_35820 PF12706 Beta-lactamase superfamily domain YIM_35825 PF00701 Dihydrodipicolinate synthetase family YIM_35830 PF00069 Protein kinase domain YIM_35830 PF03793 PASTA domain YIM_35835 PF03358 NADPH-dependent FMN reductase YIM_35835 PF01566 Natural resistance-associated macrophage protein YIM_35845 PF02511 Thymidylate synthase complementing protein YIM_35860 PF13191 AAA ATPase domain YIM_35860 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_35865 PF03358 NADPH-dependent FMN reductase YIM_35870 PF07690 Major Facilitator Superfamily YIM_35875 PF06224 Winged helix DNA-binding domain YIM_35900 PF01113 Dihydrodipicolinate reductase, N-terminus YIM_35900 PF05173 Dihydrodipicolinate reductase, C-terminus YIM_35905 PF00675 Insulinase (Peptidase family M16) YIM_35905 PF05193 Peptidase M16 inactive domain YIM_35910 PF00575 S1 RNA binding domain YIM_35910 PF00013 KH domain YIM_35910 PF01138 3' exoribonuclease family, domain 1 YIM_35910 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain YIM_35915 PF00312 Ribosomal protein S15 YIM_35930 PF06574 FAD synthetase YIM_35930 PF01687 Riboflavin kinase YIM_35935 PF09142 tRNA Pseudouridine synthase II, C terminal YIM_35935 PF01509 TruB family pseudouridylate synthase (N terminal domain) YIM_35935 PF16198 tRNA pseudouridylate synthase B C-terminal domain YIM_35940 PF07690 Major Facilitator Superfamily YIM_35975 PF02272 DHHA1 domain YIM_35975 PF01368 DHH family YIM_35990 PF07690 Major Facilitator Superfamily YIM_36000 PF02033 Ribosome-binding factor A YIM_36010 PF11987 Translation-initiation factor 2 YIM_36010 PF00009 Elongation factor Tu GTP binding domain YIM_36010 PF04760 Translation initiation factor IF-2, N-terminal region YIM_36020 PF08529 NusA N-terminal domain YIM_36020 PF13184 NusA-like KH domain YIM_36025 PF02576 RimP N-terminal domain YIM_36025 PF17384 RimP C-terminal SH3 domain YIM_36040 PF00266 Aminotransferase class-V YIM_36070 PF00005 ABC transporter YIM_36075 PF07730 Histidine kinase YIM_36080 PF00196 Bacterial regulatory proteins, luxR family YIM_36080 PF00072 Response regulator receiver domain YIM_36085 PF01638 HxlR-like helix-turn-helix YIM_36095 PF00440 Bacterial regulatory proteins, tetR family YIM_36105 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_36105 PF13191 AAA ATPase domain YIM_36115 PF02129 X-Pro dipeptidyl-peptidase (S15 family) YIM_36115 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain YIM_36120 PF00248 Aldo/keto reductase family YIM_36130 PF00005 ABC transporter YIM_36130 PF13732 Domain of unknown function (DUF4162) YIM_36140 PF05690 Thiazole biosynthesis protein ThiG YIM_36150 PF00294 pfkB family carbohydrate kinase YIM_36155 PF02310 B12 binding domain YIM_36155 PF02607 B12 binding domain YIM_36155 PF02574 Homocysteine S-methyltransferase YIM_36155 PF02965 Vitamin B12 dependent methionine synthase, activation domain YIM_36155 PF00809 Pterin binding enzyme YIM_36160 PF02219 Methylenetetrahydrofolate reductase YIM_36175 PF03176 MMPL family YIM_36185 PF11774 Lsr2 YIM_36200 PF01053 Cys/Met metabolism PLP-dependent enzyme YIM_36215 PF00753 Metallo-beta-lactamase superfamily YIM_36220 PF01494 FAD binding domain YIM_36230 PF13732 Domain of unknown function (DUF4162) YIM_36230 PF00005 ABC transporter YIM_36235 PF10397 Adenylosuccinate lyase C-terminus YIM_36235 PF00206 Lyase YIM_36240 PF07995 Glucose / Sorbosone dehydrogenase YIM_36250 PF07690 Major Facilitator Superfamily YIM_36260 PF13499 EF-hand domain pair YIM_36270 PF01546 Peptidase family M20/M25/M40 YIM_36295 PF13193 AMP-binding enzyme C-terminal domain YIM_36295 PF00501 AMP-binding enzyme YIM_36295 PF16177 Acetyl-coenzyme A synthetase N-terminus YIM_36305 PF00075 RNase H YIM_36315 PF10503 Esterase PHB depolymerase YIM_36355 PF01261 Xylose isomerase-like TIM barrel YIM_36360 PF00480 ROK family YIM_36385 PF13537 Glutamine amidotransferase domain YIM_36385 PF00733 Asparagine synthase YIM_36405 PF13298 DNA polymerase Ligase (LigD) YIM_36405 PF04679 ATP dependent DNA ligase C terminal region YIM_36405 PF01068 ATP dependent DNA ligase domain YIM_36425 PF01638 HxlR-like helix-turn-helix YIM_36440 PF16483 Beta-1,3-glucanase YIM_36440 PF00652 Ricin-type beta-trefoil lectin domain YIM_36455 PF05199 GMC oxidoreductase YIM_36455 PF00732 GMC oxidoreductase YIM_36465 PF03466 LysR substrate binding domain YIM_36465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_36470 PF00753 Metallo-beta-lactamase superfamily YIM_36475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_36475 PF03466 LysR substrate binding domain YIM_36490 PF00743 Flavin-binding monooxygenase-like YIM_36505 PF02983 Alpha-lytic protease prodomain YIM_36510 PF00072 Response regulator receiver domain YIM_36510 PF00196 Bacterial regulatory proteins, luxR family YIM_36530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_36530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_36535 PF01820 D-ala D-ala ligase N-terminus YIM_36535 PF07478 D-ala D-ala ligase C-terminus YIM_36540 PF01427 D-ala-D-ala dipeptidase YIM_36550 PF04101 Glycosyltransferase family 28 C-terminal domain YIM_36550 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_36555 PF00672 HAMP domain YIM_36555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_36555 PF00512 His Kinase A (phospho-acceptor) domain YIM_36560 PF00486 Transcriptional regulatory protein, C terminal YIM_36560 PF00072 Response regulator receiver domain YIM_36570 PF05368 NmrA-like family YIM_36580 PF12680 SnoaL-like domain YIM_36580 PF08281 Sigma-70, region 4 YIM_36580 PF04542 Sigma-70 region 2 YIM_36585 PF00999 Sodium/hydrogen exchanger family YIM_36590 PF09924 Uncharacterised conserved protein (DUF2156) YIM_36595 PF00756 Putative esterase YIM_36600 PF07730 Histidine kinase YIM_36605 PF00072 Response regulator receiver domain YIM_36605 PF00196 Bacterial regulatory proteins, luxR family YIM_36620 PF00005 ABC transporter YIM_36620 PF00664 ABC transporter transmembrane region YIM_36630 PF00296 Luciferase-like monooxygenase YIM_36650 PF12680 SnoaL-like domain YIM_36660 PF00561 alpha/beta hydrolase fold YIM_36670 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_36675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YIM_36680 PF00890 FAD binding domain YIM_36680 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) YIM_36685 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_36690 PF00890 FAD binding domain YIM_36695 PF00248 Aldo/keto reductase family YIM_36705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_36705 PF00005 ABC transporter YIM_36710 PF00005 ABC transporter YIM_36710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YIM_36715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YIM_36720 PF12911 N-terminal TM domain of oligopeptide transport permease C YIM_36720 PF00528 Binding-protein-dependent transport system inner membrane component YIM_36725 PF00528 Binding-protein-dependent transport system inner membrane component YIM_36730 PF00970 Oxidoreductase FAD-binding domain YIM_36730 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_36730 PF00175 Oxidoreductase NAD-binding domain YIM_36740 PF00355 Rieske [2Fe-2S] domain YIM_36750 PF00890 FAD binding domain YIM_36750 PF04205 FMN-binding domain YIM_36755 PF00106 short chain dehydrogenase YIM_36760 PF00296 Luciferase-like monooxygenase YIM_36765 PF14759 Reductase C-terminal YIM_36765 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_36775 PF00067 Cytochrome P450 YIM_36790 PF07859 alpha/beta hydrolase fold YIM_36795 PF00378 Enoyl-CoA hydratase/isomerase YIM_36800 PF00743 Flavin-binding monooxygenase-like YIM_36805 PF01614 Bacterial transcriptional regulator YIM_36810 PF00440 Bacterial regulatory proteins, tetR family YIM_36815 PF02515 CoA-transferase family III YIM_36825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_36825 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_36825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_36830 PF07729 FCD domain YIM_36830 PF00392 Bacterial regulatory proteins, gntR family YIM_36835 PF00106 short chain dehydrogenase YIM_36855 PF00459 Inositol monophosphatase family YIM_36860 PF01507 Phosphoadenosine phosphosulfate reductase family YIM_36865 PF00009 Elongation factor Tu GTP binding domain YIM_36870 PF00107 Zinc-binding dehydrogenase YIM_36870 PF08240 Alcohol dehydrogenase GroES-like domain YIM_36900 PF00296 Luciferase-like monooxygenase YIM_36905 PF00067 Cytochrome P450 YIM_36915 PF07690 Major Facilitator Superfamily YIM_36920 PF04616 Glycosyl hydrolases family 43 YIM_36920 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain YIM_36940 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_36940 PF14310 Fibronectin type III-like domain YIM_36940 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_36945 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_36945 PF14310 Fibronectin type III-like domain YIM_36945 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_36950 PF16355 Domain of unknown function (DUF4982) YIM_36950 PF00703 Glycosyl hydrolases family 2 YIM_36950 PF02836 Glycosyl hydrolases family 2, TIM barrel domain YIM_36950 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 YIM_36950 PF02837 Glycosyl hydrolases family 2, sugar binding domain YIM_36955 PF07690 Major Facilitator Superfamily YIM_36960 PF00232 Glycosyl hydrolase family 1 YIM_36980 PF00069 Protein kinase domain YIM_36980 PF00400 WD domain, G-beta repeat YIM_36985 PF00069 Protein kinase domain YIM_36985 PF00400 WD domain, G-beta repeat YIM_37020 PF03704 Bacterial transcriptional activator domain YIM_37020 PF00486 Transcriptional regulatory protein, C terminal YIM_37020 PF00931 NB-ARC domain YIM_37090 PF00580 UvrD/REP helicase N-terminal domain YIM_37090 PF13361 UvrD-like helicase C-terminal domain YIM_37095 PF02463 RecF/RecN/SMC N terminal domain YIM_37100 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) YIM_37100 PF01348 Type II intron maturase YIM_37125 PF00005 ABC transporter YIM_37135 PF00561 alpha/beta hydrolase fold YIM_37160 PF00528 Binding-protein-dependent transport system inner membrane component YIM_37165 PF00528 Binding-protein-dependent transport system inner membrane component YIM_37175 PF00356 Bacterial regulatory proteins, lacI family YIM_37180 PF14310 Fibronectin type III-like domain YIM_37180 PF07691 PA14 domain YIM_37180 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_37180 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_37225 PF09137 Glucodextranase, domain N YIM_37225 PF00723 Glycosyl hydrolases family 15 YIM_37240 PF00465 Iron-containing alcohol dehydrogenase YIM_37260 PF00378 Enoyl-CoA hydratase/isomerase YIM_37270 PF00118 TCP-1/cpn60 chaperonin family YIM_37275 PF00679 Elongation factor G C-terminus YIM_37275 PF00009 Elongation factor Tu GTP binding domain YIM_37275 PF03764 Elongation factor G, domain IV YIM_37285 PF00067 Cytochrome P450 YIM_37290 PF00067 Cytochrome P450 YIM_37320 PF03737 Aldolase/RraA YIM_37335 PF00881 Nitroreductase family YIM_37335 PF01996 F420-0:Gamma-glutamyl ligase YIM_37360 PF01209 ubiE/COQ5 methyltransferase family YIM_37375 PF01047 MarR family YIM_37400 PF01966 HD domain YIM_37415 PF00005 ABC transporter YIM_37420 PF01032 FecCD transport family YIM_37425 PF02569 Pantoate-beta-alanine ligase YIM_37425 PF02224 Cytidylate kinase YIM_37430 PF00561 alpha/beta hydrolase fold YIM_37435 PF00561 alpha/beta hydrolase fold YIM_37440 PF03795 YCII-related domain YIM_37445 PF08281 Sigma-70, region 4 YIM_37445 PF04542 Sigma-70 region 2 YIM_37450 PF06722 Protein of unknown function (DUF1205) YIM_37460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YIM_37460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YIM_37460 PF03129 Anticodon binding domain YIM_37460 PF02824 TGS domain YIM_37480 PF07690 Major Facilitator Superfamily YIM_37500 PF14759 Reductase C-terminal YIM_37500 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_37505 PF00067 Cytochrome P450 YIM_37510 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_37535 PF03358 NADPH-dependent FMN reductase YIM_37540 PF07729 FCD domain YIM_37540 PF00392 Bacterial regulatory proteins, gntR family YIM_37545 PF02515 CoA-transferase family III YIM_37550 PF03328 HpcH/HpaI aldolase/citrate lyase family YIM_37575 PF16859 Tetracyclin repressor-like, C-terminal domain YIM_37575 PF00440 Bacterial regulatory proteins, tetR family YIM_37585 PF00764 Arginosuccinate synthase YIM_37595 PF00107 Zinc-binding dehydrogenase YIM_37595 PF08240 Alcohol dehydrogenase GroES-like domain YIM_37610 PF04107 Glutamate-cysteine ligase family 2(GCS2) YIM_37625 PF01047 MarR family YIM_37640 PF00392 Bacterial regulatory proteins, gntR family YIM_37640 PF00155 Aminotransferase class I and II YIM_37655 PF00486 Transcriptional regulatory protein, C terminal YIM_37655 PF00931 NB-ARC domain YIM_37655 PF03704 Bacterial transcriptional activator domain YIM_37680 PF00664 ABC transporter transmembrane region YIM_37680 PF00005 ABC transporter YIM_37685 PF10502 Signal peptidase, peptidase S26 YIM_37690 PF07730 Histidine kinase YIM_37695 PF00196 Bacterial regulatory proteins, luxR family YIM_37695 PF00072 Response regulator receiver domain YIM_37700 PF08031 Berberine and berberine like YIM_37700 PF01565 FAD binding domain YIM_37715 PF01047 MarR family YIM_37735 PF00135 Carboxylesterase family YIM_37760 PF07690 Major Facilitator Superfamily YIM_37765 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_37765 PF13378 Enolase C-terminal domain-like YIM_37770 PF01081 KDPG and KHG aldolase YIM_37780 PF09339 IclR helix-turn-helix domain YIM_37780 PF01614 Bacterial transcriptional regulator YIM_37790 PF00561 alpha/beta hydrolase fold YIM_37820 PF01022 Bacterial regulatory protein, arsR family YIM_37840 PF01451 Low molecular weight phosphotyrosine protein phosphatase YIM_37855 PF00484 Carbonic anhydrase YIM_37860 PF00916 Sulfate permease family YIM_37860 PF01740 STAS domain YIM_37875 PF00392 Bacterial regulatory proteins, gntR family YIM_37880 PF00899 ThiF family YIM_37895 PF03664 Glycosyl hydrolase family 62 YIM_37895 PF00652 Ricin-type beta-trefoil lectin domain YIM_37925 PF00561 alpha/beta hydrolase fold YIM_37930 PF07690 Major Facilitator Superfamily YIM_37955 PF16653 Saccharopine dehydrogenase C-terminal domain YIM_37955 PF03435 Saccharopine dehydrogenase NADP binding domain YIM_37960 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YIM_37960 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YIM_38010 PF13662 Toprim domain YIM_38010 PF10410 DnaB-helicase binding domain of primase YIM_38010 PF08278 DNA primase DnaG DnaB-binding YIM_38010 PF01807 CHC2 zinc finger YIM_38010 PF08275 DNA primase catalytic core, N-terminal domain YIM_38015 PF04542 Sigma-70 region 2 YIM_38015 PF08281 Sigma-70, region 4 YIM_38015 PF12680 SnoaL-like domain YIM_38020 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_38025 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_38030 PF02627 Carboxymuconolactone decarboxylase family YIM_38035 PF07690 Major Facilitator Superfamily YIM_38050 PF13286 Phosphohydrolase-associated domain YIM_38050 PF01966 HD domain YIM_38065 PF00196 Bacterial regulatory proteins, luxR family YIM_38065 PF00072 Response regulator receiver domain YIM_38070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_38070 PF07730 Histidine kinase YIM_38080 PF00005 ABC transporter YIM_38085 PF03129 Anticodon binding domain YIM_38085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YIM_38100 PF01022 Bacterial regulatory protein, arsR family YIM_38105 PF01475 Ferric uptake regulator family YIM_38130 PF03773 Predicted permease YIM_38140 PF01255 Putative undecaprenyl diphosphate synthase YIM_38145 PF11967 Recombination protein O N terminal YIM_38145 PF02565 Recombination protein O C terminal YIM_38165 PF06271 RDD family YIM_38180 PF01926 50S ribosome-binding GTPase YIM_38180 PF07650 KH domain YIM_38185 PF03704 Bacterial transcriptional activator domain YIM_38185 PF00486 Transcriptional regulatory protein, C terminal YIM_38185 PF00931 NB-ARC domain YIM_38195 PF01595 Cyclin M transmembrane N-terminal domain YIM_38195 PF00571 CBS domain YIM_38195 PF03471 Transporter associated domain YIM_38200 PF02130 Uncharacterized protein family UPF0054 YIM_38205 PF02562 PhoH-like protein YIM_38210 PF01230 HIT domain YIM_38215 PF04452 RNA methyltransferase YIM_38220 PF00226 DnaJ domain YIM_38220 PF01556 DnaJ C terminal domain YIM_38220 PF00684 DnaJ central domain YIM_38225 PF01628 HrcA protein C terminal domain YIM_38230 PF00171 Aldehyde dehydrogenase family YIM_38235 PF00202 Aminotransferase class-III YIM_38250 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin YIM_38260 PF01979 Amidohydrolase family YIM_38280 PF08021 Siderophore-interacting FAD-binding domain YIM_38280 PF04954 Siderophore-interacting protein YIM_38295 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_38295 PF00440 Bacterial regulatory proteins, tetR family YIM_38300 PF01022 Bacterial regulatory protein, arsR family YIM_38320 PF03176 MMPL family YIM_38325 PF05231 MASE1 YIM_38325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_38325 PF07730 Histidine kinase YIM_38330 PF00196 Bacterial regulatory proteins, luxR family YIM_38330 PF00072 Response regulator receiver domain YIM_38335 PF04055 Radical SAM superfamily YIM_38340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_38340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YIM_38345 PF01507 Phosphoadenosine phosphosulfate reductase family YIM_38350 PF01507 Phosphoadenosine phosphosulfate reductase family YIM_38355 PF00009 Elongation factor Tu GTP binding domain YIM_38370 PF00378 Enoyl-CoA hydratase/isomerase YIM_38375 PF01337 Barstar (barnase inhibitor) YIM_38380 PF00545 ribonuclease YIM_38390 PF08240 Alcohol dehydrogenase GroES-like domain YIM_38390 PF00107 Zinc-binding dehydrogenase YIM_38395 PF12697 Alpha/beta hydrolase family YIM_38400 PF13520 Amino acid permease YIM_38405 PF03060 Nitronate monooxygenase YIM_38420 PF02838 Glycosyl hydrolase family 20, domain 2 YIM_38420 PF00728 Glycosyl hydrolase family 20, catalytic domain YIM_38425 PF01425 Amidase YIM_38430 PF00679 Elongation factor G C-terminus YIM_38430 PF00009 Elongation factor Tu GTP binding domain YIM_38430 PF06421 GTP-binding protein LepA C-terminus YIM_38430 PF03144 Elongation factor Tu domain 2 YIM_38435 PF03551 Transcriptional regulator PadR-like family YIM_38435 PF13847 Methyltransferase domain YIM_38470 PF01649 Ribosomal protein S20 YIM_38475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_38475 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_38485 PF00291 Pyridoxal-phosphate dependent enzyme YIM_38490 PF10531 SLBB domain YIM_38515 PF02645 Uncharacterised protein, DegV family COG1307 YIM_38520 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_38525 PF00300 Histidine phosphatase superfamily (branch 1) YIM_38535 PF01467 Cytidylyltransferase-like YIM_38540 PF00270 DEAD/DEAH box helicase YIM_38540 PF00271 Helicase conserved C-terminal domain YIM_38540 PF16124 RecQ zinc-binding YIM_38545 PF00083 Sugar (and other) transporter YIM_38550 PF01494 FAD binding domain YIM_38555 PF17926 Tetracyclin repressor-like, C-terminal domain YIM_38555 PF00440 Bacterial regulatory proteins, tetR family YIM_38565 PF12704 MacB-like periplasmic core domain YIM_38565 PF02687 FtsX-like permease family YIM_38565 PF00005 ABC transporter YIM_38575 PF00072 Response regulator receiver domain YIM_38575 PF00196 Bacterial regulatory proteins, luxR family YIM_38585 PF00696 Amino acid kinase family YIM_38585 PF01472 PUA domain YIM_38590 PF01018 GTP1/OBG YIM_38590 PF01926 50S ribosome-binding GTPase YIM_38590 PF09269 Domain of unknown function (DUF1967) YIM_38595 PF01016 Ribosomal L27 protein YIM_38600 PF00829 Ribosomal prokaryotic L21 protein YIM_38605 PF10150 Ribonuclease E/G family YIM_38605 PF10150 Ribonuclease E/G family YIM_38610 PF00082 Subtilase family YIM_38615 PF01061 ABC-2 type transporter YIM_38625 PF00005 ABC transporter YIM_38640 PF00392 Bacterial regulatory proteins, gntR family YIM_38640 PF07729 FCD domain YIM_38645 PF07690 Major Facilitator Superfamily YIM_38650 PF00334 Nucleoside diphosphate kinase YIM_38660 PF01804 Penicillin amidase YIM_38675 PF08245 Mur ligase middle domain YIM_38675 PF02875 Mur ligase family, glutamate ligase domain YIM_38680 PF08241 Methyltransferase domain YIM_38700 PF01261 Xylose isomerase-like TIM barrel YIM_38710 PF02653 Branched-chain amino acid transport system / permease component YIM_38715 PF02653 Branched-chain amino acid transport system / permease component YIM_38720 PF00005 ABC transporter YIM_38725 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_38725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_38730 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_38735 PF13472 GDSL-like Lipase/Acylhydrolase family YIM_38745 PF08264 Anticodon-binding domain of tRNA YIM_38745 PF00133 tRNA synthetases class I (I, L, M and V) YIM_38745 PF10458 Valyl tRNA synthetase tRNA binding arm YIM_38750 PF01568 Molydopterin dinucleotide binding domain YIM_38750 PF00384 Molybdopterin oxidoreductase YIM_38785 PF02634 FdhD/NarQ family YIM_38805 PF06689 ClpX C4-type zinc finger YIM_38805 PF07724 AAA domain (Cdc48 subfamily) YIM_38805 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_38810 PF00574 Clp protease YIM_38815 PF00574 Clp protease YIM_38820 PF05698 Bacterial trigger factor protein (TF) C-terminus YIM_38820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YIM_38820 PF05697 Bacterial trigger factor protein (TF) YIM_38835 PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding YIM_38835 PF01565 FAD binding domain YIM_38855 PF00350 Dynamin family YIM_38860 PF00350 Dynamin family YIM_38880 PF03485 Arginyl tRNA synthetase N terminal domain YIM_38880 PF00750 tRNA synthetases class I (R) YIM_38880 PF05746 DALR anticodon binding domain YIM_38925 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YIM_38925 PF17854 FtsK alpha domain YIM_38925 PF01580 FtsK/SpoIIIE family YIM_38925 PF09397 Ftsk gamma domain YIM_38955 PF00293 NUDIX domain YIM_38970 PF00296 Luciferase-like monooxygenase YIM_38980 PF00005 ABC transporter YIM_39000 PF05958 tRNA (Uracil-5-)-methyltransferase YIM_39000 PF01938 TRAM domain YIM_39005 PF08239 Bacterial SH3 domain YIM_39005 PF00877 NlpC/P60 family YIM_39005 PF01476 LysM domain YIM_39015 PF06827 Zinc finger found in FPG and IleRS YIM_39015 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YIM_39015 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YIM_39020 PF02502 Ribose/Galactose Isomerase YIM_39035 PF00083 Sugar (and other) transporter YIM_39035 PF07690 Major Facilitator Superfamily YIM_39040 PF01323 DSBA-like thioredoxin domain YIM_39045 PF01433 Peptidase family M1 domain YIM_39045 PF11838 ERAP1-like C-terminal domain YIM_39050 PF17174 Domain of unknown function (DUF5130) YIM_39065 PF00924 Mechanosensitive ion channel YIM_39070 PF01152 Bacterial-like globin YIM_39075 PF00128 Alpha amylase, catalytic domain YIM_39105 PF05088 Bacterial NAD-glutamate dehydrogenase YIM_39115 PF12848 ABC transporter YIM_39115 PF00005 ABC transporter YIM_39120 PF00436 Single-strand binding protein family YIM_39125 PF05425 Copper resistance protein D YIM_39125 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) YIM_39160 PF02543 Carbamoyltransferase N-terminus YIM_39160 PF16861 Carbamoyltransferase C-terminus YIM_39165 PF14226 non-haem dioxygenase in morphine synthesis N-terminal YIM_39165 PF03171 2OG-Fe(II) oxygenase superfamily YIM_39180 PF03171 2OG-Fe(II) oxygenase superfamily YIM_39180 PF14226 non-haem dioxygenase in morphine synthesis N-terminal YIM_39185 PF00668 Condensation domain YIM_39185 PF00975 Thioesterase domain YIM_39185 PF13193 AMP-binding enzyme C-terminal domain YIM_39185 PF00501 AMP-binding enzyme YIM_39185 PF00550 Phosphopantetheine attachment site YIM_39190 PF00202 Aminotransferase class-III YIM_39195 PF00266 Aminotransferase class-V YIM_39200 PF14226 non-haem dioxygenase in morphine synthesis N-terminal YIM_39200 PF03171 2OG-Fe(II) oxygenase superfamily YIM_39205 PF07690 Major Facilitator Superfamily YIM_39215 PF01757 Acyltransferase family YIM_39220 PF09278 MerR, DNA binding YIM_39220 PF00376 MerR family regulatory protein YIM_39235 PF03551 Transcriptional regulator PadR-like family YIM_39250 PF01717 Cobalamin-independent synthase, Catalytic domain YIM_39260 PF03466 LysR substrate binding domain YIM_39260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_39265 PF00892 EamA-like transporter family YIM_39270 PF07690 Major Facilitator Superfamily YIM_39275 PF01047 MarR family YIM_39280 PF00194 Eukaryotic-type carbonic anhydrase YIM_39320 PF03033 Glycosyltransferase family 28 N-terminal domain YIM_39325 PF01209 ubiE/COQ5 methyltransferase family YIM_39330 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_39335 PF00668 Condensation domain YIM_39335 PF13193 AMP-binding enzyme C-terminal domain YIM_39335 PF00501 AMP-binding enzyme YIM_39335 PF00550 Phosphopantetheine attachment site YIM_39335 PF00550 Phosphopantetheine attachment site YIM_39335 PF00501 AMP-binding enzyme YIM_39335 PF13193 AMP-binding enzyme C-terminal domain YIM_39335 PF00668 Condensation domain YIM_39340 PF00668 Condensation domain YIM_39340 PF00501 AMP-binding enzyme YIM_39340 PF13193 AMP-binding enzyme C-terminal domain YIM_39340 PF00550 Phosphopantetheine attachment site YIM_39345 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_39345 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_39345 PF00698 Acyl transferase domain YIM_39345 PF08659 KR domain YIM_39345 PF00550 Phosphopantetheine attachment site YIM_39345 PF14765 Polyketide synthase dehydratase YIM_39345 PF16197 Ketoacyl-synthetase C-terminal extension YIM_39350 PF00501 AMP-binding enzyme YIM_39365 PF00005 ABC transporter YIM_39370 PF01061 ABC-2 type transporter YIM_39375 PF00196 Bacterial regulatory proteins, luxR family YIM_39375 PF00072 Response regulator receiver domain YIM_39390 PF01156 Inosine-uridine preferring nucleoside hydrolase YIM_39405 PF00183 Hsp90 protein YIM_39415 PF01243 Pyridoxamine 5'-phosphate oxidase YIM_39420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YIM_39420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase YIM_39430 PF00561 alpha/beta hydrolase fold YIM_39435 PF01761 3-dehydroquinate synthase YIM_39445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_39445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_39450 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_39455 PF00480 ROK family YIM_39460 PF01220 Dehydroquinase class II YIM_39465 PF08659 KR domain YIM_39465 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_39465 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_39465 PF00698 Acyl transferase domain YIM_39465 PF16197 Ketoacyl-synthetase C-terminal extension YIM_39465 PF00550 Phosphopantetheine attachment site YIM_39465 PF14765 Polyketide synthase dehydratase YIM_39485 PF16197 Ketoacyl-synthetase C-terminal extension YIM_39485 PF00698 Acyl transferase domain YIM_39485 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_39485 PF08659 KR domain YIM_39485 PF00550 Phosphopantetheine attachment site YIM_39485 PF14765 Polyketide synthase dehydratase YIM_39485 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_39515 PF16197 Ketoacyl-synthetase C-terminal extension YIM_39515 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_39515 PF14765 Polyketide synthase dehydratase YIM_39515 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_39515 PF08659 KR domain YIM_39515 PF00698 Acyl transferase domain YIM_39515 PF00550 Phosphopantetheine attachment site YIM_39525 PF01474 Class-II DAHP synthetase family YIM_39530 PF01494 FAD binding domain YIM_39535 PF00196 Bacterial regulatory proteins, luxR family YIM_39545 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_39550 PF00067 Cytochrome P450 YIM_39555 PF00067 Cytochrome P450 YIM_39570 PF16197 Ketoacyl-synthetase C-terminal extension YIM_39570 PF14765 Polyketide synthase dehydratase YIM_39570 PF00698 Acyl transferase domain YIM_39570 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_39570 PF08659 KR domain YIM_39570 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_39570 PF00550 Phosphopantetheine attachment site YIM_39575 PF00698 Acyl transferase domain YIM_39575 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_39575 PF16197 Ketoacyl-synthetase C-terminal extension YIM_39575 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_39575 PF08659 KR domain YIM_39575 PF00550 Phosphopantetheine attachment site YIM_39575 PF14765 Polyketide synthase dehydratase YIM_39575 PF00698 Acyl transferase domain YIM_39575 PF16197 Ketoacyl-synthetase C-terminal extension YIM_39575 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_39575 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_39575 PF08659 KR domain YIM_39575 PF00550 Phosphopantetheine attachment site YIM_39575 PF14765 Polyketide synthase dehydratase YIM_39590 PF00698 Acyl transferase domain YIM_39590 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_39590 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_39590 PF16197 Ketoacyl-synthetase C-terminal extension YIM_39590 PF08659 KR domain YIM_39590 PF00550 Phosphopantetheine attachment site YIM_39590 PF14765 Polyketide synthase dehydratase YIM_39605 PF16363 GDP-mannose 4,6 dehydratase YIM_39610 PF00664 ABC transporter transmembrane region YIM_39610 PF00005 ABC transporter YIM_39615 PF00664 ABC transporter transmembrane region YIM_39615 PF00005 ABC transporter YIM_39620 PF00067 Cytochrome P450 YIM_39625 PF07690 Major Facilitator Superfamily YIM_39630 PF01209 ubiE/COQ5 methyltransferase family YIM_39635 PF09278 MerR, DNA binding YIM_39635 PF00376 MerR family regulatory protein YIM_39655 PF04679 ATP dependent DNA ligase C terminal region YIM_39655 PF01068 ATP dependent DNA ligase domain YIM_39660 PF01047 MarR family YIM_39665 PF07690 Major Facilitator Superfamily YIM_39670 PF00248 Aldo/keto reductase family YIM_39675 PF00106 short chain dehydrogenase YIM_39690 PF00196 Bacterial regulatory proteins, luxR family YIM_39695 PF01740 STAS domain YIM_39700 PF03466 LysR substrate binding domain YIM_39700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_39705 PF00248 Aldo/keto reductase family YIM_39715 PF13191 AAA ATPase domain YIM_39715 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_39725 PF00082 Subtilase family YIM_39725 PF05922 Peptidase inhibitor I9 YIM_39750 PF13520 Amino acid permease YIM_39755 PF00795 Carbon-nitrogen hydrolase YIM_39760 PF01593 Flavin containing amine oxidoreductase YIM_39780 PF00491 Arginase family YIM_39785 PF00672 HAMP domain YIM_39785 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_39790 PF00289 Biotin carboxylase, N-terminal domain YIM_39790 PF02436 Conserved carboxylase domain YIM_39790 PF00682 HMGL-like YIM_39790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_39790 PF00364 Biotin-requiring enzyme YIM_39790 PF02785 Biotin carboxylase C-terminal domain YIM_39795 PF05922 Peptidase inhibitor I9 YIM_39795 PF00082 Subtilase family YIM_39805 PF01232 Mannitol dehydrogenase Rossmann domain YIM_39805 PF08125 Mannitol dehydrogenase C-terminal domain YIM_39830 PF00072 Response regulator receiver domain YIM_39830 PF00196 Bacterial regulatory proteins, luxR family YIM_39840 PF02467 Transcription factor WhiB YIM_39845 PF00248 Aldo/keto reductase family YIM_39850 PF05336 L-rhamnose mutarotase YIM_39855 PF00392 Bacterial regulatory proteins, gntR family YIM_39855 PF07729 FCD domain YIM_39860 PF02653 Branched-chain amino acid transport system / permease component YIM_39865 PF00005 ABC transporter YIM_39880 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_39880 PF13378 Enolase C-terminal domain-like YIM_39885 PF01557 Fumarylacetoacetate (FAA) hydrolase family YIM_39895 PF00106 short chain dehydrogenase YIM_39905 PF03435 Saccharopine dehydrogenase NADP binding domain YIM_39910 PF00743 Flavin-binding monooxygenase-like YIM_39915 PF08360 QacR-like protein, C-terminal region YIM_39915 PF00440 Bacterial regulatory proteins, tetR family YIM_39920 PF14716 Helix-hairpin-helix domain YIM_39920 PF02811 PHP domain YIM_39920 PF14791 DNA polymerase beta thumb YIM_39935 PF00128 Alpha amylase, catalytic domain YIM_39940 PF00528 Binding-protein-dependent transport system inner membrane component YIM_39945 PF00528 Binding-protein-dependent transport system inner membrane component YIM_39950 PF13416 Bacterial extracellular solute-binding protein YIM_39955 PF00356 Bacterial regulatory proteins, lacI family YIM_39965 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_39965 PF00440 Bacterial regulatory proteins, tetR family YIM_39975 PF12833 Helix-turn-helix domain YIM_39975 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term YIM_39980 PF00743 Flavin-binding monooxygenase-like YIM_39985 PF05199 GMC oxidoreductase YIM_39995 PF17227 Family of unknown function (DUF5302) YIM_40005 PF03466 LysR substrate binding domain YIM_40005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_40015 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YIM_40015 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YIM_40025 PF01494 FAD binding domain YIM_40030 PF00561 alpha/beta hydrolase fold YIM_40035 PF01494 FAD binding domain YIM_40065 PF03301 Tryptophan 2,3-dioxygenase YIM_40080 PF01494 FAD binding domain YIM_40090 PF13193 AMP-binding enzyme C-terminal domain YIM_40090 PF00501 AMP-binding enzyme YIM_40095 PF00106 short chain dehydrogenase YIM_40100 PF00378 Enoyl-CoA hydratase/isomerase YIM_40110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_40110 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_40110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_40120 PF00180 Isocitrate/isopropylmalate dehydrogenase YIM_40125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_40125 PF03466 LysR substrate binding domain YIM_40130 PF00939 Sodium:sulfate symporter transmembrane region YIM_40135 PF00596 Class II Aldolase and Adducin N-terminal domain YIM_40135 PF01008 Initiation factor 2 subunit family YIM_40140 PF00266 Aminotransferase class-V YIM_40150 PF13183 4Fe-4S dicluster domain YIM_40150 PF01565 FAD binding domain YIM_40150 PF02913 FAD linked oxidases, C-terminal domain YIM_40160 PF00310 Glutamine amidotransferases class-II YIM_40160 PF04898 Glutamate synthase central domain YIM_40160 PF01645 Conserved region in glutamate synthase YIM_40160 PF01493 GXGXG motif YIM_40165 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_40165 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YIM_40185 PF01032 FecCD transport family YIM_40190 PF01032 FecCD transport family YIM_40195 PF00664 ABC transporter transmembrane region YIM_40195 PF00005 ABC transporter YIM_40200 PF00664 ABC transporter transmembrane region YIM_40200 PF00005 ABC transporter YIM_40205 PF01497 Periplasmic binding protein YIM_40210 PF03621 MbtH-like protein YIM_40215 PF00668 Condensation domain YIM_40215 PF00550 Phosphopantetheine attachment site YIM_40215 PF13193 AMP-binding enzyme C-terminal domain YIM_40215 PF00501 AMP-binding enzyme YIM_40215 PF07993 Male sterility protein YIM_40220 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) YIM_40225 PF00551 Formyl transferase YIM_40225 PF02911 Formyl transferase, C-terminal domain YIM_40235 PF00313 'Cold-shock' DNA-binding domain YIM_40240 PF09423 PhoD-like phosphatase YIM_40240 PF16655 PhoD-like phosphatase, N-terminal domain YIM_40250 PF00931 NB-ARC domain YIM_40250 PF03704 Bacterial transcriptional activator domain YIM_40250 PF00486 Transcriptional regulatory protein, C terminal YIM_40260 PF00561 alpha/beta hydrolase fold YIM_40265 PF02973 Sialidase, N-terminal domain YIM_40265 PF00754 F5/8 type C domain YIM_40265 PF13088 BNR repeat-like domain YIM_40275 PF07729 FCD domain YIM_40275 PF00392 Bacterial regulatory proteins, gntR family YIM_40280 PF00106 short chain dehydrogenase YIM_40295 PF01039 Carboxyl transferase domain YIM_40300 PF00975 Thioesterase domain YIM_40315 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_40315 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_40315 PF08659 KR domain YIM_40315 PF00550 Phosphopantetheine attachment site YIM_40315 PF14765 Polyketide synthase dehydratase YIM_40315 PF16197 Ketoacyl-synthetase C-terminal extension YIM_40315 PF00698 Acyl transferase domain YIM_40320 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_40320 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_40320 PF00550 Phosphopantetheine attachment site YIM_40320 PF00698 Acyl transferase domain YIM_40320 PF08240 Alcohol dehydrogenase GroES-like domain YIM_40320 PF08659 KR domain YIM_40320 PF08990 Erythronolide synthase docking YIM_40320 PF16197 Ketoacyl-synthetase C-terminal extension YIM_40320 PF14765 Polyketide synthase dehydratase YIM_40330 PF16197 Ketoacyl-synthetase C-terminal extension YIM_40330 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_40330 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_40330 PF08659 KR domain YIM_40330 PF00550 Phosphopantetheine attachment site YIM_40330 PF14765 Polyketide synthase dehydratase YIM_40330 PF00698 Acyl transferase domain YIM_40345 PF00144 Beta-lactamase YIM_40350 PF00266 Aminotransferase class-V YIM_40355 PF00486 Transcriptional regulatory protein, C terminal YIM_40355 PF03704 Bacterial transcriptional activator domain YIM_40355 PF00931 NB-ARC domain YIM_40365 PF13360 PQQ-like domain YIM_40365 PF01011 PQQ enzyme repeat YIM_40385 PF02687 FtsX-like permease family YIM_40385 PF12704 MacB-like periplasmic core domain YIM_40390 PF00005 ABC transporter YIM_40390 PF02687 FtsX-like permease family YIM_40390 PF12704 MacB-like periplasmic core domain YIM_40410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_40410 PF00512 His Kinase A (phospho-acceptor) domain YIM_40410 PF00672 HAMP domain YIM_40415 PF00072 Response regulator receiver domain YIM_40415 PF00486 Transcriptional regulatory protein, C terminal YIM_40420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YIM_40420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YIM_40435 PF00364 Biotin-requiring enzyme YIM_40435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_40435 PF02817 e3 binding domain YIM_40440 PF00067 Cytochrome P450 YIM_40450 PF03704 Bacterial transcriptional activator domain YIM_40450 PF00486 Transcriptional regulatory protein, C terminal YIM_40450 PF00931 NB-ARC domain YIM_40455 PF13538 UvrD-like helicase C-terminal domain YIM_40455 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain YIM_40455 PF14490 Helix-hairpin-helix containing domain YIM_40460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_40465 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_40470 PF01037 Lrp/AsnC ligand binding domain YIM_40475 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YIM_40475 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YIM_40490 PF00384 Molybdopterin oxidoreductase YIM_40490 PF01568 Molydopterin dinucleotide binding domain YIM_40495 PF04434 SWIM zinc finger YIM_40500 PF05762 VWA domain containing CoxE-like protein YIM_40510 PF07728 AAA domain (dynein-related subfamily) YIM_40515 PF13569 Domain of unknown function (DUF4132) YIM_40525 PF01061 ABC-2 type transporter YIM_40530 PF13732 Domain of unknown function (DUF4162) YIM_40530 PF00005 ABC transporter YIM_40540 PF00069 Protein kinase domain YIM_40540 PF03793 PASTA domain YIM_40555 PF17863 AAA lid domain YIM_40555 PF07726 ATPase family associated with various cellular activities (AAA) YIM_40565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_40565 PF00672 HAMP domain YIM_40565 PF00512 His Kinase A (phospho-acceptor) domain YIM_40570 PF00486 Transcriptional regulatory protein, C terminal YIM_40570 PF00072 Response regulator receiver domain YIM_40575 PF00931 NB-ARC domain YIM_40575 PF00486 Transcriptional regulatory protein, C terminal YIM_40575 PF03704 Bacterial transcriptional activator domain YIM_40585 PF00486 Transcriptional regulatory protein, C terminal YIM_40585 PF00072 Response regulator receiver domain YIM_40610 PF01507 Phosphoadenosine phosphosulfate reductase family YIM_40615 PF00009 Elongation factor Tu GTP binding domain YIM_40630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_40630 PF03466 LysR substrate binding domain YIM_40635 PF00089 Trypsin YIM_40640 PF03989 DNA gyrase C-terminal domain, beta-propeller YIM_40640 PF00521 DNA gyrase/topoisomerase IV, subunit A YIM_40645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_40645 PF00986 DNA gyrase B subunit, carboxyl terminus YIM_40645 PF00204 DNA gyrase B YIM_40645 PF01751 Toprim domain YIM_40660 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_40660 PF14759 Reductase C-terminal YIM_40670 PF00069 Protein kinase domain YIM_40730 PF01022 Bacterial regulatory protein, arsR family YIM_40735 PF11799 impB/mucB/samB family C-terminal domain YIM_40735 PF00817 impB/mucB/samB family YIM_40760 PF01039 Carboxyl transferase domain YIM_40770 PF16363 GDP-mannose 4,6 dehydratase YIM_40775 PF01613 Flavin reductase like domain YIM_40785 PF00698 Acyl transferase domain YIM_40785 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_40785 PF08659 KR domain YIM_40785 PF00550 Phosphopantetheine attachment site YIM_40785 PF16197 Ketoacyl-synthetase C-terminal extension YIM_40785 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_40790 PF00067 Cytochrome P450 YIM_40795 PF05721 Phytanoyl-CoA dioxygenase (PhyH) YIM_40800 PF00550 Phosphopantetheine attachment site YIM_40800 PF00668 Condensation domain YIM_40800 PF13193 AMP-binding enzyme C-terminal domain YIM_40800 PF00501 AMP-binding enzyme YIM_40805 PF00668 Condensation domain YIM_40805 PF00501 AMP-binding enzyme YIM_40805 PF00550 Phosphopantetheine attachment site YIM_40805 PF07993 Male sterility protein YIM_40805 PF13193 AMP-binding enzyme C-terminal domain YIM_40820 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal YIM_40820 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal YIM_40825 PF00221 Aromatic amino acid lyase YIM_40830 PF00501 AMP-binding enzyme YIM_40830 PF00550 Phosphopantetheine attachment site YIM_40830 PF13193 AMP-binding enzyme C-terminal domain YIM_40830 PF00668 Condensation domain YIM_40840 PF00733 Asparagine synthase YIM_40840 PF13537 Glutamine amidotransferase domain YIM_40845 PF00550 Phosphopantetheine attachment site YIM_40845 PF00668 Condensation domain YIM_40845 PF00975 Thioesterase domain YIM_40845 PF00501 AMP-binding enzyme YIM_40845 PF13193 AMP-binding enzyme C-terminal domain YIM_40850 PF00501 AMP-binding enzyme YIM_40850 PF13193 AMP-binding enzyme C-terminal domain YIM_40850 PF00668 Condensation domain YIM_40850 PF00550 Phosphopantetheine attachment site YIM_40855 PF01177 Asp/Glu/Hydantoin racemase YIM_40870 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_40870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_40870 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_40875 PF13193 AMP-binding enzyme C-terminal domain YIM_40875 PF00501 AMP-binding enzyme YIM_40880 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_40880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_40895 PF01757 Acyltransferase family YIM_40900 PF08241 Methyltransferase domain YIM_40905 PF00291 Pyridoxal-phosphate dependent enzyme YIM_40910 PF01494 FAD binding domain YIM_40915 PF07478 D-ala D-ala ligase C-terminus YIM_40915 PF01820 D-ala D-ala ligase N-terminus YIM_40930 PF07690 Major Facilitator Superfamily YIM_40935 PF01979 Amidohydrolase family YIM_40940 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_40940 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_40940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_40950 PF07690 Major Facilitator Superfamily YIM_40960 PF01565 FAD binding domain YIM_40960 PF08031 Berberine and berberine like YIM_40965 PF01209 ubiE/COQ5 methyltransferase family YIM_40975 PF08608 Wyosine base formation YIM_40975 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain YIM_40995 PF00732 GMC oxidoreductase YIM_40995 PF05199 GMC oxidoreductase YIM_41005 PF00067 Cytochrome P450 YIM_41030 PF12833 Helix-turn-helix domain YIM_41030 PF02311 AraC-like ligand binding domain YIM_41040 PF00196 Bacterial regulatory proteins, luxR family YIM_41040 PF00072 Response regulator receiver domain YIM_41045 PF07730 Histidine kinase YIM_41045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_41065 PF00486 Transcriptional regulatory protein, C terminal YIM_41065 PF03704 Bacterial transcriptional activator domain YIM_41070 PF01638 HxlR-like helix-turn-helix YIM_41075 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_41080 PF00733 Asparagine synthase YIM_41080 PF13537 Glutamine amidotransferase domain YIM_41085 PF07683 Cobalamin synthesis protein cobW C-terminal domain YIM_41085 PF02492 CobW/HypB/UreG, nucleotide-binding domain YIM_41090 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain YIM_41090 PF05221 S-adenosyl-L-homocysteine hydrolase YIM_41095 PF01568 Molydopterin dinucleotide binding domain YIM_41095 PF00384 Molybdopterin oxidoreductase YIM_41105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_41105 PF18719 ArlS sensor domain YIM_41105 PF00512 His Kinase A (phospho-acceptor) domain YIM_41110 PF00486 Transcriptional regulatory protein, C terminal YIM_41110 PF00072 Response regulator receiver domain YIM_41115 PF00990 Diguanylate cyclase, GGDEF domain YIM_41115 PF00072 Response regulator receiver domain YIM_41145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_41145 PF03466 LysR substrate binding domain YIM_41160 PF01965 DJ-1/PfpI family YIM_41165 PF01022 Bacterial regulatory protein, arsR family YIM_41175 PF00596 Class II Aldolase and Adducin N-terminal domain YIM_41180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_41180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YIM_41185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YIM_41185 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YIM_41190 PF02502 Ribose/Galactose Isomerase YIM_41195 PF02733 Dak1 domain YIM_41195 PF02734 DAK2 domain YIM_41200 PF13419 Haloacid dehalogenase-like hydrolase YIM_41205 PF00300 Histidine phosphatase superfamily (branch 1) YIM_41210 PF00455 DeoR C terminal sensor domain YIM_41210 PF08220 DeoR-like helix-turn-helix domain YIM_41215 PF07690 Major Facilitator Superfamily YIM_41220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_41240 PF13443 Cro/C1-type HTH DNA-binding domain YIM_41245 PF01638 HxlR-like helix-turn-helix YIM_41255 PF00296 Luciferase-like monooxygenase YIM_41270 PF00072 Response regulator receiver domain YIM_41270 PF03861 ANTAR domain YIM_41275 PF03631 Virulence factor BrkB YIM_41280 PF00135 Carboxylesterase family YIM_41285 PF08359 YsiA-like protein, C-terminal region YIM_41285 PF00440 Bacterial regulatory proteins, tetR family YIM_41295 PF01341 Glycosyl hydrolases family 6 YIM_41300 PF00722 Glycosyl hydrolases family 16 YIM_41305 PF00083 Sugar (and other) transporter YIM_41315 PF07690 Major Facilitator Superfamily YIM_41320 PF00535 Glycosyl transferase family 2 YIM_41325 PF06969 HemN C-terminal domain YIM_41325 PF04055 Radical SAM superfamily YIM_41330 PF00356 Bacterial regulatory proteins, lacI family YIM_41335 PF00440 Bacterial regulatory proteins, tetR family YIM_41350 PF02355 Protein export membrane protein YIM_41350 PF07549 SecD/SecF GG Motif YIM_41355 PF13847 Methyltransferase domain YIM_41360 PF00743 Flavin-binding monooxygenase-like YIM_41375 PF00085 Thioredoxin YIM_41380 PF02082 Transcriptional regulator YIM_41395 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase YIM_41400 PF00067 Cytochrome P450 YIM_41405 PF00072 Response regulator receiver domain YIM_41405 PF00196 Bacterial regulatory proteins, luxR family YIM_41410 PF07730 Histidine kinase YIM_41415 PF00561 alpha/beta hydrolase fold YIM_41420 PF04679 ATP dependent DNA ligase C terminal region YIM_41420 PF01068 ATP dependent DNA ligase domain YIM_41420 PF13298 DNA polymerase Ligase (LigD) YIM_41425 PF00440 Bacterial regulatory proteins, tetR family YIM_41435 PF02811 PHP domain YIM_41435 PF07733 Bacterial DNA polymerase III alpha NTPase domain YIM_41435 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YIM_41435 PF14579 Helix-hairpin-helix motif YIM_41435 PF01336 OB-fold nucleic acid binding domain YIM_41440 PF00561 alpha/beta hydrolase fold YIM_41445 PF00440 Bacterial regulatory proteins, tetR family YIM_41465 PF01494 FAD binding domain YIM_41475 PF04226 Transglycosylase associated protein YIM_41500 PF07690 Major Facilitator Superfamily YIM_41515 PF07729 FCD domain YIM_41515 PF00392 Bacterial regulatory proteins, gntR family YIM_41525 PF01339 CheB methylesterase YIM_41525 PF00072 Response regulator receiver domain YIM_41535 PF01339 CheB methylesterase YIM_41535 PF08448 PAS fold YIM_41535 PF03705 CheR methyltransferase, all-alpha domain YIM_41535 PF01739 CheR methyltransferase, SAM binding domain YIM_41570 PF07690 Major Facilitator Superfamily YIM_41575 PF01638 HxlR-like helix-turn-helix YIM_41590 PF00578 AhpC/TSA family YIM_41600 PF01725 Ham1 family YIM_41605 PF03725 3' exoribonuclease family, domain 2 YIM_41605 PF01138 3' exoribonuclease family, domain 1 YIM_41615 PF12706 Beta-lactamase superfamily domain YIM_41620 PF01177 Asp/Glu/Hydantoin racemase YIM_41625 PF01694 Rhomboid family YIM_41630 PF07676 WD40-like Beta Propeller Repeat YIM_41635 PF01694 Rhomboid family YIM_41640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YIM_41640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YIM_41655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_41655 PF03466 LysR substrate binding domain YIM_41670 PF00291 Pyridoxal-phosphate dependent enzyme YIM_41675 PF02597 ThiS family YIM_41680 PF14464 Prokaryotic homologs of the JAB domain YIM_41685 PF03576 Peptidase family S58 YIM_41690 PF09438 Domain of unknown function (DUF2017) YIM_41695 PF02617 ATP-dependent Clp protease adaptor protein ClpS YIM_41700 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain YIM_41700 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain YIM_41705 PF00857 Isochorismatase family YIM_41720 PF13307 Helicase C-terminal domain YIM_41750 PF00115 Cytochrome C and Quinol oxidase polypeptide I YIM_41755 PF04978 Protein of unknown function (DUF664) YIM_41765 PF16995 Transmembrane region of lysyl-tRNA synthetase YIM_41765 PF09924 Uncharacterised conserved protein (DUF2156) YIM_41765 PF00152 tRNA synthetases class II (D, K and N) YIM_41765 PF01336 OB-fold nucleic acid binding domain YIM_41770 PF02548 Ketopantoate hydroxymethyltransferase YIM_41775 PF00561 alpha/beta hydrolase fold YIM_41785 PF00202 Aminotransferase class-III YIM_41790 PF00171 Aldehyde dehydrogenase family YIM_41795 PF01497 Periplasmic binding protein YIM_41800 PF08206 Ribonuclease B OB domain YIM_41800 PF00773 RNB domain YIM_41800 PF00575 S1 RNA binding domain YIM_41810 PF00041 Fibronectin type III domain YIM_41810 PF02018 Carbohydrate binding domain YIM_41810 PF00704 Glycosyl hydrolases family 18 YIM_41820 PF00877 NlpC/P60 family YIM_41870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_41870 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_41870 PF18267 Rubredoxin NAD+ reductase C-terminal domain YIM_41870 PF04324 BFD-like [2Fe-2S] binding domain YIM_41870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YIM_41885 PF04545 Sigma-70, region 4 YIM_41885 PF04542 Sigma-70 region 2 YIM_41895 PF00196 Bacterial regulatory proteins, luxR family YIM_41895 PF00072 Response regulator receiver domain YIM_41905 PF03186 CobD/Cbib protein YIM_41910 PF02104 SURF1 family YIM_41920 PF01451 Low molecular weight phosphotyrosine protein phosphatase YIM_41925 PF00356 Bacterial regulatory proteins, lacI family YIM_41935 PF00528 Binding-protein-dependent transport system inner membrane component YIM_41940 PF00528 Binding-protein-dependent transport system inner membrane component YIM_41945 PF00232 Glycosyl hydrolase family 1 YIM_41950 PF10503 Esterase PHB depolymerase YIM_41960 PF00561 alpha/beta hydrolase fold YIM_41965 PF00072 Response regulator receiver domain YIM_41965 PF00196 Bacterial regulatory proteins, luxR family YIM_41970 PF00561 alpha/beta hydrolase fold YIM_41980 PF04542 Sigma-70 region 2 YIM_41980 PF08281 Sigma-70, region 4 YIM_41980 PF12680 SnoaL-like domain YIM_41990 PF01784 NIF3 (NGG1p interacting factor 3) YIM_41995 PF02591 C4-type zinc ribbon domain YIM_42000 PF00300 Histidine phosphatase superfamily (branch 1) YIM_42000 PF13456 Reverse transcriptase-like YIM_42010 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain YIM_42010 PF00293 NUDIX domain YIM_42010 PF09297 NADH pyrophosphatase zinc ribbon domain YIM_42015 PF00675 Insulinase (Peptidase family M16) YIM_42015 PF05193 Peptidase M16 inactive domain YIM_42050 PF17863 AAA lid domain YIM_42050 PF07726 ATPase family associated with various cellular activities (AAA) YIM_42055 PF14258 Domain of unknown function (DUF4350) YIM_42070 PF04228 Putative neutral zinc metallopeptidase YIM_42080 PF00440 Bacterial regulatory proteins, tetR family YIM_42090 PF02254 TrkA-N domain YIM_42090 PF00999 Sodium/hydrogen exchanger family YIM_42095 PF13361 UvrD-like helicase C-terminal domain YIM_42095 PF00580 UvrD/REP helicase N-terminal domain YIM_42100 PF13361 UvrD-like helicase C-terminal domain YIM_42100 PF00580 UvrD/REP helicase N-terminal domain YIM_42110 PF04954 Siderophore-interacting protein YIM_42110 PF08021 Siderophore-interacting FAD-binding domain YIM_42120 PF08279 HTH domain YIM_42120 PF13280 WYL domain YIM_42135 PF01425 Amidase YIM_42155 PF03952 Enolase, N-terminal domain YIM_42155 PF00113 Enolase, C-terminal TIM barrel domain YIM_42160 PF04324 BFD-like [2Fe-2S] binding domain YIM_42160 PF18267 Rubredoxin NAD+ reductase C-terminal domain YIM_42160 PF13806 Rieske-like [2Fe-2S] domain YIM_42160 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_42160 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_42160 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YIM_42165 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YIM_42165 PF18267 Rubredoxin NAD+ reductase C-terminal domain YIM_42165 PF13806 Rieske-like [2Fe-2S] domain YIM_42165 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_42165 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_42165 PF04324 BFD-like [2Fe-2S] binding domain YIM_42170 PF07690 Major Facilitator Superfamily YIM_42175 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YIM_42175 PF04324 BFD-like [2Fe-2S] binding domain YIM_42175 PF18267 Rubredoxin NAD+ reductase C-terminal domain YIM_42175 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_42180 PF01568 Molydopterin dinucleotide binding domain YIM_42180 PF00384 Molybdopterin oxidoreductase YIM_42180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YIM_42190 PF00899 ThiF family YIM_42190 PF00581 Rhodanese-like domain YIM_42200 PF12697 Alpha/beta hydrolase family YIM_42210 PF00561 alpha/beta hydrolase fold YIM_42220 PF00440 Bacterial regulatory proteins, tetR family YIM_42245 PF00270 DEAD/DEAH box helicase YIM_42245 PF00271 Helicase conserved C-terminal domain YIM_42270 PF01914 MarC family integral membrane protein YIM_42275 PF02811 PHP domain YIM_42290 PF13344 Haloacid dehalogenase-like hydrolase YIM_42290 PF00293 NUDIX domain YIM_42305 PF01544 CorA-like Mg2+ transporter protein YIM_42330 PF17912 MalK OB fold domain YIM_42330 PF00005 ABC transporter YIM_42335 PF00528 Binding-protein-dependent transport system inner membrane component YIM_42340 PF00528 Binding-protein-dependent transport system inner membrane component YIM_42345 PF01547 Bacterial extracellular solute-binding protein YIM_42355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_42355 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_42355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_42365 PF01145 SPFH domain / Band 7 family YIM_42370 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase YIM_42375 PF00571 CBS domain YIM_42375 PF01769 Divalent cation transporter YIM_42375 PF03448 MgtE intracellular N domain YIM_42385 PF10609 NUBPL iron-transfer P-loop NTPase YIM_42385 PF01883 Iron-sulfur cluster assembly protein YIM_42390 PF02416 mttA/Hcf106 family YIM_42395 PF00595 PDZ domain YIM_42405 PF08281 Sigma-70, region 4 YIM_42405 PF04542 Sigma-70 region 2 YIM_42410 PF01596 O-methyltransferase YIM_42415 PF07690 Major Facilitator Superfamily YIM_42420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_42420 PF03466 LysR substrate binding domain YIM_42425 PF02789 Cytosol aminopeptidase family, N-terminal domain YIM_42425 PF00883 Cytosol aminopeptidase family, catalytic domain YIM_42435 PF00378 Enoyl-CoA hydratase/isomerase YIM_42440 PF00117 Glutamine amidotransferase class-I YIM_42440 PF00958 GMP synthase C terminal domain YIM_42440 PF13673 Acetyltransferase (GNAT) domain YIM_42440 PF03352 Methyladenine glycosylase YIM_42440 PF13302 Acetyltransferase (GNAT) domain YIM_42465 PF01654 Cytochrome bd terminal oxidase subunit I YIM_42475 PF00664 ABC transporter transmembrane region YIM_42475 PF00005 ABC transporter YIM_42480 PF00664 ABC transporter transmembrane region YIM_42480 PF00005 ABC transporter YIM_42490 PF03641 Possible lysine decarboxylase YIM_42495 PF03641 Possible lysine decarboxylase YIM_42500 PF00759 Glycosyl hydrolase family 9 YIM_42500 PF02927 Cellulase N-terminal ig-like domain YIM_42505 PF07687 Peptidase dimerisation domain YIM_42505 PF01546 Peptidase family M20/M25/M40 YIM_42515 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle YIM_42515 PF14602 Hexapeptide repeat of succinyl-transferase YIM_42525 PF01494 FAD binding domain YIM_42535 PF00155 Aminotransferase class I and II YIM_42540 PF00037 4Fe-4S binding domain YIM_42560 PF01996 F420-0:Gamma-glutamyl ligase YIM_42560 PF00881 Nitroreductase family YIM_42575 PF00392 Bacterial regulatory proteins, gntR family YIM_42590 PF00483 Nucleotidyl transferase YIM_42610 PF13439 Glycosyltransferase Family 4 YIM_42625 PF00534 Glycosyl transferases group 1 YIM_42625 PF13439 Glycosyltransferase Family 4 YIM_42630 PF04321 RmlD substrate binding domain YIM_42635 PF16363 GDP-mannose 4,6 dehydratase YIM_42640 PF13399 LytR cell envelope-related transcriptional attenuator YIM_42640 PF03816 Cell envelope-related transcriptional attenuator domain YIM_42645 PF03816 Cell envelope-related transcriptional attenuator domain YIM_42645 PF13399 LytR cell envelope-related transcriptional attenuator YIM_42655 PF07681 DoxX YIM_42670 PF06259 Alpha/beta hydrolase YIM_42680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_42680 PF02142 MGS-like domain YIM_42680 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YIM_42690 PF08310 LGFP repeat YIM_42690 PF00756 Putative esterase YIM_42695 PF01039 Carboxyl transferase domain YIM_42700 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_42700 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_42700 PF16197 Ketoacyl-synthetase C-terminal extension YIM_42700 PF00698 Acyl transferase domain YIM_42700 PF14765 Polyketide synthase dehydratase YIM_42700 PF00550 Phosphopantetheine attachment site YIM_42700 PF08659 KR domain YIM_42705 PF00501 AMP-binding enzyme YIM_42710 PF07690 Major Facilitator Superfamily YIM_42715 PF00268 Ribonucleotide reductase, small chain YIM_42730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_42730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_42730 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_42735 PF13193 AMP-binding enzyme C-terminal domain YIM_42735 PF00501 AMP-binding enzyme YIM_42745 PF00731 AIR carboxylase YIM_42750 PF02222 ATP-grasp domain YIM_42750 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain YIM_42755 PF09594 Glycosyltransferase family 87 YIM_42760 PF09594 Glycosyltransferase family 87 YIM_42785 PF00512 His Kinase A (phospho-acceptor) domain YIM_42785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_42785 PF00672 HAMP domain YIM_42790 PF00072 Response regulator receiver domain YIM_42790 PF00486 Transcriptional regulatory protein, C terminal YIM_42795 PF00459 Inositol monophosphatase family YIM_42825 PF00682 HMGL-like YIM_42835 PF03099 Biotin/lipoate A/B protein ligase family YIM_42835 PF02237 Biotin protein ligase C terminal domain YIM_42840 PF08239 Bacterial SH3 domain YIM_42840 PF00877 NlpC/P60 family YIM_42840 PF01476 LysM domain YIM_42860 PF01494 FAD binding domain YIM_42865 PF00392 Bacterial regulatory proteins, gntR family YIM_42875 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_42875 PF00440 Bacterial regulatory proteins, tetR family YIM_42885 PF06441 Epoxide hydrolase N terminus YIM_42900 PF01039 Carboxyl transferase domain YIM_42915 PF07690 Major Facilitator Superfamily YIM_42920 PF00933 Glycosyl hydrolase family 3 N terminal domain YIM_42920 PF01915 Glycosyl hydrolase family 3 C-terminal domain YIM_42920 PF14310 Fibronectin type III-like domain YIM_42925 PF02545 Maf-like protein YIM_42930 PF00375 Sodium:dicarboxylate symporter family YIM_42965 PF01048 Phosphorylase superfamily YIM_42970 PF08028 Acyl-CoA dehydrogenase, C-terminal domain YIM_42970 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_42970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_42975 PF01008 Initiation factor 2 subunit family YIM_42985 PF00596 Class II Aldolase and Adducin N-terminal domain YIM_42990 PF03079 ARD/ARD' family YIM_42995 PF02785 Biotin carboxylase C-terminal domain YIM_42995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YIM_42995 PF00364 Biotin-requiring enzyme YIM_42995 PF00289 Biotin carboxylase, N-terminal domain YIM_43005 PF05231 MASE1 YIM_43005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_43005 PF07730 Histidine kinase YIM_43010 PF00196 Bacterial regulatory proteins, luxR family YIM_43010 PF00072 Response regulator receiver domain YIM_43020 PF00501 AMP-binding enzyme YIM_43020 PF13193 AMP-binding enzyme C-terminal domain YIM_43025 PF16901 C-terminal domain of alpha-glycerophosphate oxidase YIM_43025 PF01266 FAD dependent oxidoreductase YIM_43030 PF00230 Major intrinsic protein YIM_43035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YIM_43035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_43045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YIM_43045 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_43060 PF01546 Peptidase family M20/M25/M40 YIM_43060 PF04107 Glutamate-cysteine ligase family 2(GCS2) YIM_43075 PF01642 Methylmalonyl-CoA mutase YIM_43075 PF02310 B12 binding domain YIM_43080 PF01642 Methylmalonyl-CoA mutase YIM_43085 PF00069 Protein kinase domain YIM_43090 PF01048 Phosphorylase superfamily YIM_43095 PF06722 Protein of unknown function (DUF1205) YIM_43100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YIM_43100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YIM_43100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YIM_43100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YIM_43105 PF02096 60Kd inner membrane protein YIM_43135 PF13538 UvrD-like helicase C-terminal domain YIM_43145 PF07161 LppX_LprAFG lipoprotein YIM_43150 PF07690 Major Facilitator Superfamily YIM_43155 PF03129 Anticodon binding domain YIM_43155 PF13393 Histidyl-tRNA synthetase YIM_43160 PF00248 Aldo/keto reductase family YIM_43165 PF00248 Aldo/keto reductase family YIM_43170 PF09278 MerR, DNA binding YIM_43170 PF00376 MerR family regulatory protein YIM_43190 PF01791 DeoC/LacD family aldolase YIM_43195 PF00171 Aldehyde dehydrogenase family YIM_43200 PF00171 Aldehyde dehydrogenase family YIM_43210 PF00067 Cytochrome P450 YIM_43215 PF00975 Thioesterase domain YIM_43220 PF00583 Acetyltransferase (GNAT) family YIM_43225 PF07498 Rho termination factor, N-terminal domain YIM_43225 PF07497 Rho termination factor, RNA-binding domain YIM_43225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YIM_43235 PF00270 DEAD/DEAH box helicase YIM_43235 PF08148 DSHCT (NUC185) domain YIM_43235 PF00271 Helicase conserved C-terminal domain YIM_43245 PF07690 Major Facilitator Superfamily YIM_43250 PF00962 Adenosine/AMP deaminase YIM_43260 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain YIM_43260 PF00591 Glycosyl transferase family, a/b domain YIM_43260 PF02885 Glycosyl transferase family, helical bundle domain YIM_43265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YIM_43290 PF10566 Glycoside hydrolase 97 YIM_43290 PF14508 Glycosyl-hydrolase 97 N-terminal YIM_43290 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation YIM_43295 PF17801 Alpha galactosidase C-terminal beta sandwich domain YIM_43295 PF16499 Alpha galactosidase A YIM_43310 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YIM_43320 PF02910 Fumarate reductase flavoprotein C-term YIM_43320 PF00890 FAD binding domain YIM_43325 PF13085 2Fe-2S iron-sulfur cluster binding domain YIM_43335 PF00356 Bacterial regulatory proteins, lacI family YIM_43340 PF01593 Flavin containing amine oxidoreductase YIM_43345 PF05378 Hydantoinase/oxoprolinase N-terminal region YIM_43345 PF01968 Hydantoinase/oxoprolinase YIM_43365 PF00082 Subtilase family YIM_43380 PF07690 Major Facilitator Superfamily YIM_43385 PF03631 Virulence factor BrkB YIM_43390 PF01494 FAD binding domain YIM_43395 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_43395 PF00440 Bacterial regulatory proteins, tetR family YIM_43405 PF00579 tRNA synthetases class I (W and Y) YIM_43415 PF04055 Radical SAM superfamily YIM_43440 PF03372 Endonuclease/Exonuclease/phosphatase family YIM_43455 PF00180 Isocitrate/isopropylmalate dehydrogenase YIM_43490 PF07690 Major Facilitator Superfamily YIM_43495 PF01022 Bacterial regulatory protein, arsR family YIM_43520 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YIM_43520 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YIM_43530 PF00561 alpha/beta hydrolase fold YIM_43545 PF01979 Amidohydrolase family YIM_43560 PF02811 PHP domain YIM_43560 PF14579 Helix-hairpin-helix motif YIM_43560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YIM_43560 PF07733 Bacterial DNA polymerase III alpha NTPase domain YIM_43560 PF01336 OB-fold nucleic acid binding domain YIM_43585 PF01161 Phosphatidylethanolamine-binding protein YIM_43595 PF02142 MGS-like domain YIM_43595 PF01808 AICARFT/IMPCHase bienzyme YIM_43600 PF00551 Formyl transferase YIM_43615 PF00549 CoA-ligase YIM_43615 PF02629 CoA binding domain YIM_43620 PF08442 ATP-grasp domain YIM_43620 PF00549 CoA-ligase YIM_43640 PF13361 UvrD-like helicase C-terminal domain YIM_43640 PF00580 UvrD/REP helicase N-terminal domain YIM_43650 PF01817 Chorismate mutase type II YIM_43670 PF00069 Protein kinase domain YIM_43675 PF03793 PASTA domain YIM_43675 PF00069 Protein kinase domain YIM_43680 PF03466 LysR substrate binding domain YIM_43680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YIM_43685 PF00892 EamA-like transporter family YIM_43690 PF00196 Bacterial regulatory proteins, luxR family YIM_43690 PF00072 Response regulator receiver domain YIM_43710 PF02540 NAD synthase YIM_43710 PF00958 GMP synthase C terminal domain YIM_43710 PF00117 Glutamine amidotransferase class-I YIM_43715 PF13823 Alcohol dehydrogenase GroES-associated YIM_43715 PF00107 Zinc-binding dehydrogenase YIM_43715 PF08240 Alcohol dehydrogenase GroES-like domain YIM_43720 PF00171 Aldehyde dehydrogenase family YIM_43735 PF05199 GMC oxidoreductase YIM_43740 PF00478 IMP dehydrogenase / GMP reductase domain YIM_43755 PF00571 CBS domain YIM_43755 PF00478 IMP dehydrogenase / GMP reductase domain YIM_43760 PF17252 Family of unknown function (DUF5319) YIM_43770 PF04542 Sigma-70 region 2 YIM_43770 PF08281 Sigma-70, region 4 YIM_43775 PF00072 Response regulator receiver domain YIM_43775 PF00196 Bacterial regulatory proteins, luxR family YIM_43790 PF02467 Transcription factor WhiB YIM_43795 PF00440 Bacterial regulatory proteins, tetR family YIM_43805 PF00118 TCP-1/cpn60 chaperonin family YIM_43810 PF00166 Chaperonin 10 Kd subunit YIM_43815 PF09423 PhoD-like phosphatase YIM_43815 PF16655 PhoD-like phosphatase, N-terminal domain YIM_43825 PF00814 Glycoprotease family YIM_43830 PF00583 Acetyltransferase (GNAT) family YIM_43835 PF00814 Glycoprotease family YIM_43850 PF07729 FCD domain YIM_43850 PF00392 Bacterial regulatory proteins, gntR family YIM_43860 PF13193 AMP-binding enzyme C-terminal domain YIM_43860 PF00501 AMP-binding enzyme YIM_43865 PF17848 Acetyl-coA carboxylase zinc finger domain YIM_43865 PF01039 Carboxyl transferase domain YIM_43870 PF01425 Amidase YIM_43875 PF05448 Acetyl xylan esterase (AXE1) YIM_43880 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE YIM_43885 PF00364 Biotin-requiring enzyme YIM_43885 PF00561 alpha/beta hydrolase fold YIM_43890 PF00842 Alanine racemase, C-terminal domain YIM_43890 PF01168 Alanine racemase, N-terminal domain YIM_43895 PF00005 ABC transporter YIM_43895 PF08402 TOBE domain YIM_43900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YIM_43900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YIM_43905 PF16912 Glucose dehydrogenase C-terminus YIM_43905 PF08240 Alcohol dehydrogenase GroES-like domain YIM_43910 PF08220 DeoR-like helix-turn-helix domain YIM_43910 PF00455 DeoR C terminal sensor domain YIM_43915 PF00107 Zinc-binding dehydrogenase YIM_43915 PF08240 Alcohol dehydrogenase GroES-like domain YIM_43920 PF00528 Binding-protein-dependent transport system inner membrane component YIM_43925 PF00528 Binding-protein-dependent transport system inner membrane component YIM_43935 PF03853 YjeF-related protein N-terminus YIM_43935 PF01256 Carbohydrate kinase YIM_43940 PF01380 SIS domain YIM_43970 PF00501 AMP-binding enzyme YIM_43990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YIM_43990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YIM_43990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YIM_43990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YIM_43995 PF00380 Ribosomal protein S9/S16 YIM_44000 PF00572 Ribosomal protein L13 YIM_44040 PF00012 Hsp70 protein YIM_44045 PF01580 FtsK/SpoIIIE family YIM_44055 PF00082 Subtilase family YIM_44070 PF05108 Type VII secretion system ESX-1, transport TM domain B YIM_44095 PF01416 tRNA pseudouridine synthase YIM_44100 PF01196 Ribosomal protein L17 YIM_44105 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain YIM_44105 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain YIM_44105 PF01000 RNA polymerase Rpb3/RpoA insert domain YIM_44110 PF00163 Ribosomal protein S4/S9 N-terminal domain YIM_44110 PF01479 S4 domain YIM_44115 PF00411 Ribosomal protein S11 YIM_44125 PF00416 Ribosomal protein S13/S18 YIM_44130 PF00444 Ribosomal protein L36 YIM_44135 PF01176 Translation initiation factor 1A / IF-1 YIM_44140 PF00557 Metallopeptidase family M24 YIM_44150 PF00344 SecY translocase YIM_44155 PF01810 LysE type translocator YIM_44165 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A YIM_44170 PF00327 Ribosomal protein L30p/L7e YIM_44175 PF00333 Ribosomal protein S5, N-terminal domain YIM_44175 PF03719 Ribosomal protein S5, C-terminal domain YIM_44180 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast YIM_44185 PF00347 Ribosomal protein L6 YIM_44190 PF00410 Ribosomal protein S8 YIM_44195 PF00253 Ribosomal protein S14p/S29e YIM_44200 PF00281 Ribosomal protein L5 YIM_44200 PF00673 ribosomal L5P family C-terminus YIM_44205 PF00467 KOW motif YIM_44205 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 YIM_44210 PF00238 Ribosomal protein L14p/L23e YIM_44215 PF00366 Ribosomal protein S17 YIM_44220 PF00831 Ribosomal L29 protein YIM_44225 PF00252 Ribosomal protein L16p/L10e YIM_44230 PF00189 Ribosomal protein S3, C-terminal domain YIM_44230 PF07650 KH domain YIM_44235 PF00237 Ribosomal protein L22p/L17e YIM_44240 PF00203 Ribosomal protein S19 YIM_44245 PF00181 Ribosomal Proteins L2, RNA binding domain YIM_44245 PF03947 Ribosomal Proteins L2, C-terminal domain YIM_44250 PF00276 Ribosomal protein L23 YIM_44255 PF00573 Ribosomal protein L4/L1 family YIM_44260 PF00297 Ribosomal protein L3 YIM_44265 PF00338 Ribosomal protein S10p/S20e YIM_44270 PF03143 Elongation factor Tu C-terminal domain YIM_44270 PF03144 Elongation factor Tu domain 2 YIM_44270 PF00009 Elongation factor Tu GTP binding domain YIM_44275 PF00009 Elongation factor Tu GTP binding domain YIM_44275 PF03764 Elongation factor G, domain IV YIM_44275 PF03144 Elongation factor Tu domain 2 YIM_44275 PF00679 Elongation factor G C-terminus YIM_44275 PF14492 Elongation Factor G, domain II YIM_44280 PF00177 Ribosomal protein S7p/S5e YIM_44285 PF00164 Ribosomal protein S12/S23 YIM_44315 PF01026 TatD related DNase YIM_44325 PF01040 UbiA prenyltransferase family YIM_44335 PF04616 Glycosyl hydrolases family 43 YIM_44335 PF03422 Carbohydrate binding module (family 6) YIM_44340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_44340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_44350 PF02653 Branched-chain amino acid transport system / permease component YIM_44355 PF00005 ABC transporter YIM_44360 PF00480 ROK family YIM_44360 PF01047 MarR family YIM_44365 PF00480 ROK family YIM_44365 PF01325 Iron dependent repressor, N-terminal DNA binding domain YIM_44415 PF01427 D-ala-D-ala dipeptidase YIM_44420 PF00072 Response regulator receiver domain YIM_44420 PF00196 Bacterial regulatory proteins, luxR family YIM_44425 PF07730 Histidine kinase YIM_44425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_44430 PF00005 ABC transporter YIM_44430 PF13732 Domain of unknown function (DUF4162) YIM_44450 PF04997 RNA polymerase Rpb1, domain 1 YIM_44450 PF00623 RNA polymerase Rpb1, domain 2 YIM_44450 PF04998 RNA polymerase Rpb1, domain 5 YIM_44450 PF04983 RNA polymerase Rpb1, domain 3 YIM_44450 PF05000 RNA polymerase Rpb1, domain 4 YIM_44455 PF04565 RNA polymerase Rpb2, domain 3 YIM_44455 PF04561 RNA polymerase Rpb2, domain 2 YIM_44455 PF04563 RNA polymerase beta subunit YIM_44455 PF10385 RNA polymerase beta subunit external 1 domain YIM_44455 PF04560 RNA polymerase Rpb2, domain 7 YIM_44455 PF00562 RNA polymerase Rpb2, domain 6 YIM_44500 PF02405 Permease MlaE YIM_44510 PF00005 ABC transporter YIM_44515 PF16320 Ribosomal protein L7/L12 dimerisation domain YIM_44515 PF00542 Ribosomal protein L7/L12 C-terminal domain YIM_44520 PF00466 Ribosomal protein L10 YIM_44540 PF00687 Ribosomal protein L1p/L10e family YIM_44545 PF03946 Ribosomal protein L11, N-terminal domain YIM_44545 PF00298 Ribosomal protein L11, RNA binding domain YIM_44550 PF02357 Transcription termination factor nusG YIM_44555 PF00584 SecE/Sec61-gamma subunits of protein translocation complex YIM_44565 PF00155 Aminotransferase class I and II YIM_44570 PF00296 Luciferase-like monooxygenase YIM_44575 PF00392 Bacterial regulatory proteins, gntR family YIM_44575 PF00155 Aminotransferase class I and II YIM_44595 PF13452 N-terminal half of MaoC dehydratase YIM_44600 PF02983 Alpha-lytic protease prodomain YIM_44600 PF00089 Trypsin YIM_44605 PF00471 Ribosomal protein L33 YIM_44620 PF03707 Bacterial signalling protein N terminal repeat YIM_44620 PF00990 Diguanylate cyclase, GGDEF domain YIM_44620 PF00563 EAL domain YIM_44635 PF05362 Lon protease (S16) C-terminal proteolytic domain YIM_44635 PF00004 ATPase family associated with various cellular activities (AAA) YIM_44635 PF02190 ATP-dependent protease La (LON) substrate-binding domain YIM_44640 PF09335 SNARE associated Golgi protein YIM_44645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_44645 PF07730 Histidine kinase YIM_44650 PF00196 Bacterial regulatory proteins, luxR family YIM_44650 PF00072 Response regulator receiver domain YIM_44655 PF03109 ABC1 family YIM_44660 PF16295 Tetracyclin repressor-like, C-terminal domain YIM_44660 PF00440 Bacterial regulatory proteins, tetR family YIM_44665 PF00440 Bacterial regulatory proteins, tetR family YIM_44665 PF08359 YsiA-like protein, C-terminal region YIM_44680 PF00144 Beta-lactamase YIM_44690 PF00144 Beta-lactamase YIM_44710 PF00293 NUDIX domain YIM_44710 PF13344 Haloacid dehalogenase-like hydrolase YIM_44725 PF07729 FCD domain YIM_44725 PF00392 Bacterial regulatory proteins, gntR family YIM_44735 PF03668 P-loop ATPase protein family YIM_44775 PF00145 C-5 cytosine-specific DNA methylase YIM_44805 PF04461 Protein of unknown function (DUF520) YIM_44815 PF00440 Bacterial regulatory proteins, tetR family YIM_44820 PF00561 alpha/beta hydrolase fold YIM_44825 PF00483 Nucleotidyl transferase YIM_44830 PF01435 Peptidase family M48 YIM_44840 PF00296 Luciferase-like monooxygenase YIM_44850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_44850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_44855 PF16363 GDP-mannose 4,6 dehydratase YIM_44860 PF00355 Rieske [2Fe-2S] domain YIM_44875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_44890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YIM_44895 PF00132 Bacterial transferase hexapeptide (six repeats) YIM_44965 PF00535 Glycosyl transferase family 2 YIM_44975 PF01037 Lrp/AsnC ligand binding domain YIM_44975 PF13404 AsnC-type helix-turn-helix domain YIM_44980 PF00378 Enoyl-CoA hydratase/isomerase YIM_44985 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg YIM_44985 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase YIM_44985 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II YIM_44990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_45000 PF00348 Polyprenyl synthetase YIM_45060 PF00361 Proton-conducting membrane transporter YIM_45065 PF00361 Proton-conducting membrane transporter YIM_45070 PF00361 Proton-conducting membrane transporter YIM_45070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YIM_45075 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YIM_45080 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YIM_45085 PF12838 4Fe-4S dicluster domain YIM_45090 PF00146 NADH dehydrogenase YIM_45095 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YIM_45095 PF01568 Molydopterin dinucleotide binding domain YIM_45095 PF00384 Molybdopterin oxidoreductase YIM_45100 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YIM_45100 PF10531 SLBB domain YIM_45100 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YIM_45110 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit YIM_45115 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit YIM_45120 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit YIM_45125 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YIM_45130 PF01494 FAD binding domain YIM_45135 PF01209 ubiE/COQ5 methyltransferase family YIM_45140 PF00534 Glycosyl transferases group 1 YIM_45140 PF13579 Glycosyl transferase 4-like domain YIM_45145 PF00534 Glycosyl transferases group 1 YIM_45145 PF13439 Glycosyltransferase Family 4 YIM_45150 PF00459 Inositol monophosphatase family YIM_45160 PF01433 Peptidase family M1 domain YIM_45160 PF11838 ERAP1-like C-terminal domain YIM_45165 PF03746 LamB/YcsF family YIM_45170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_45170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_45175 PF00378 Enoyl-CoA hydratase/isomerase YIM_45180 PF13193 AMP-binding enzyme C-terminal domain YIM_45180 PF00501 AMP-binding enzyme YIM_45190 PF01040 UbiA prenyltransferase family YIM_45195 PF00291 Pyridoxal-phosphate dependent enzyme YIM_45205 PF01037 Lrp/AsnC ligand binding domain YIM_45225 PF01578 Cytochrome C assembly protein YIM_45240 PF08534 Redoxin YIM_45245 PF00300 Histidine phosphatase superfamily (branch 1) YIM_45250 PF00202 Aminotransferase class-III YIM_45260 PF02687 FtsX-like permease family YIM_45260 PF00005 ABC transporter YIM_45260 PF12704 MacB-like periplasmic core domain YIM_45265 PF12704 MacB-like periplasmic core domain YIM_45265 PF02687 FtsX-like permease family YIM_45265 PF00005 ABC transporter YIM_45270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YIM_45290 PF00490 Delta-aminolevulinic acid dehydratase YIM_45295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YIM_45295 PF14824 Sirohaem biosynthesis protein central YIM_45295 PF10414 Sirohaem synthase dimerisation region YIM_45300 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain YIM_45300 PF03900 Porphobilinogen deaminase, C-terminal domain YIM_45305 PF01488 Shikimate / quinate 5-dehydrogenase YIM_45305 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain YIM_45305 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain YIM_45310 PF06971 Putative DNA-binding protein N-terminus YIM_45310 PF02629 CoA binding domain YIM_45315 PF00486 Transcriptional regulatory protein, C terminal YIM_45315 PF03704 Bacterial transcriptional activator domain YIM_45315 PF00931 NB-ARC domain YIM_45345 PF05768 Glutaredoxin-like domain (DUF836) YIM_45350 PF00501 AMP-binding enzyme YIM_45350 PF13193 AMP-binding enzyme C-terminal domain YIM_45355 PF08281 Sigma-70, region 4 YIM_45355 PF04542 Sigma-70 region 2 YIM_45370 PF01553 Acyltransferase YIM_45375 PF01370 NAD dependent epimerase/dehydratase family YIM_45385 PF12728 Helix-turn-helix domain YIM_45390 PF03807 NADP oxidoreductase coenzyme F420-dependent YIM_45390 PF14748 Pyrroline-5-carboxylate reductase dimerisation YIM_45400 PF01619 Proline dehydrogenase YIM_45405 PF01261 Xylose isomerase-like TIM barrel YIM_45415 PF02541 Ppx/GppA phosphatase family YIM_45420 PF00072 Response regulator receiver domain YIM_45420 PF00486 Transcriptional regulatory protein, C terminal YIM_45425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_45425 PF00512 His Kinase A (phospho-acceptor) domain YIM_45430 PF00248 Aldo/keto reductase family YIM_45450 PF00300 Histidine phosphatase superfamily (branch 1) YIM_45460 PF10722 Putative bacterial sensory transduction regulator YIM_45465 PF00534 Glycosyl transferases group 1 YIM_45465 PF13439 Glycosyltransferase Family 4 YIM_45470 PF00561 alpha/beta hydrolase fold YIM_45475 PF17964 Bacterial Ig domain YIM_45475 PF03734 L,D-transpeptidase catalytic domain YIM_45480 PF01565 FAD binding domain YIM_45480 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain YIM_45500 PF01842 ACT domain YIM_45500 PF00551 Formyl transferase YIM_45510 PF00107 Zinc-binding dehydrogenase YIM_45510 PF16884 N-terminal domain of oxidoreductase YIM_45525 PF00528 Binding-protein-dependent transport system inner membrane component YIM_45530 PF00528 Binding-protein-dependent transport system inner membrane component YIM_45535 PF00221 Aromatic amino acid lyase YIM_45540 PF02423 Ornithine cyclodeaminase/mu-crystallin family YIM_45550 PF10724 Protein of unknown function (DUF2516) YIM_45560 PF01381 Helix-turn-helix YIM_45570 PF02224 Cytidylate kinase YIM_45570 PF02569 Pantoate-beta-alanine ligase YIM_45590 PF04542 Sigma-70 region 2 YIM_45590 PF08281 Sigma-70, region 4 YIM_45595 PF03795 YCII-related domain YIM_45605 PF04286 Protein of unknown function (DUF445) YIM_45610 PF00155 Aminotransferase class I and II YIM_45625 PF00392 Bacterial regulatory proteins, gntR family YIM_45625 PF00155 Aminotransferase class I and II YIM_45655 PF00291 Pyridoxal-phosphate dependent enzyme YIM_45660 PF01425 Amidase YIM_45665 PF00440 Bacterial regulatory proteins, tetR family YIM_45665 PF02909 Tetracyclin repressor-like, C-terminal domain YIM_45680 PF17961 Bacterial Ig domain YIM_45680 PF04650 YSIRK type signal peptide YIM_45680 PF10425 C-terminus of bacterial fibrinogen-binding adhesin YIM_45680 PF17210 SdrD B-like domain YIM_45680 PF00746 LPXTG cell wall anchor motif YIM_45690 PF00440 Bacterial regulatory proteins, tetR family YIM_45690 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_45700 PF00206 Lyase YIM_45700 PF10415 Fumarase C C-terminus YIM_45710 PF00589 Phage integrase family YIM_45710 PF14659 Phage integrase, N-terminal SAM-like domain YIM_45730 PF09397 Ftsk gamma domain YIM_45730 PF17854 FtsK alpha domain YIM_45730 PF01580 FtsK/SpoIIIE family YIM_45750 PF00392 Bacterial regulatory proteins, gntR family YIM_45750 PF07702 UTRA domain YIM_45755 PF13419 Haloacid dehalogenase-like hydrolase YIM_45790 PF00313 'Cold-shock' DNA-binding domain YIM_45795 PF17964 Bacterial Ig domain YIM_45795 PF03734 L,D-transpeptidase catalytic domain YIM_45805 PF08281 Sigma-70, region 4 YIM_45805 PF04542 Sigma-70 region 2 YIM_45815 PF08946 Osmosensory transporter coiled coil YIM_45815 PF00083 Sugar (and other) transporter YIM_45825 PF00149 Calcineurin-like phosphoesterase YIM_45830 PF00069 Protein kinase domain YIM_45830 PF16919 Protein kinase G rubredoxin domain YIM_45830 PF16918 Protein kinase G tetratricopeptide repeat YIM_45835 PF00465 Iron-containing alcohol dehydrogenase YIM_45840 PF00171 Aldehyde dehydrogenase family YIM_45845 PF13378 Enolase C-terminal domain-like YIM_45845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YIM_45850 PF09339 IclR helix-turn-helix domain YIM_45850 PF01614 Bacterial transcriptional regulator YIM_45855 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_45865 PF00072 Response regulator receiver domain YIM_45865 PF00196 Bacterial regulatory proteins, luxR family YIM_45870 PF07730 Histidine kinase YIM_45875 PF00313 'Cold-shock' DNA-binding domain YIM_45885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YIM_45885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YIM_45885 PF00205 Thiamine pyrophosphate enzyme, central domain YIM_45895 PF00005 ABC transporter YIM_45900 PF00664 ABC transporter transmembrane region YIM_45900 PF00005 ABC transporter YIM_45910 PF00069 Protein kinase domain YIM_45915 PF00174 Oxidoreductase molybdopterin binding domain YIM_45960 PF00012 Hsp70 protein YIM_45975 PF07732 Multicopper oxidase YIM_46015 PF17926 Tetracyclin repressor-like, C-terminal domain YIM_46015 PF00440 Bacterial regulatory proteins, tetR family YIM_46020 PF08240 Alcohol dehydrogenase GroES-like domain YIM_46020 PF00107 Zinc-binding dehydrogenase YIM_46035 PF00440 Bacterial regulatory proteins, tetR family YIM_46060 PF00135 Carboxylesterase family YIM_46075 PF00069 Protein kinase domain YIM_46075 PF00211 Adenylate and Guanylate cyclase catalytic domain YIM_46105 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YIM_46105 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YIM_46110 PF00892 EamA-like transporter family YIM_46125 PF01207 Dihydrouridine synthase (Dus) YIM_46145 PF01370 NAD dependent epimerase/dehydratase family YIM_46150 PF03756 A-factor biosynthesis hotdog domain YIM_46155 PF00440 Bacterial regulatory proteins, tetR family YIM_46160 PF00440 Bacterial regulatory proteins, tetR family YIM_46165 PF03704 Bacterial transcriptional activator domain YIM_46175 PF00975 Thioesterase domain YIM_46175 PF00550 Phosphopantetheine attachment site YIM_46175 PF08659 KR domain YIM_46175 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_46175 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_46175 PF00698 Acyl transferase domain YIM_46175 PF08990 Erythronolide synthase docking YIM_46175 PF16197 Ketoacyl-synthetase C-terminal extension YIM_46180 PF08990 Erythronolide synthase docking YIM_46180 PF16197 Ketoacyl-synthetase C-terminal extension YIM_46180 PF00698 Acyl transferase domain YIM_46180 PF08659 KR domain YIM_46180 PF00109 Beta-ketoacyl synthase, N-terminal domain YIM_46180 PF02801 Beta-ketoacyl synthase, C-terminal domain YIM_46180 PF00550 Phosphopantetheine attachment site YIM_46185 PF01895 PhoU domain YIM_46190 PF03816 Cell envelope-related transcriptional attenuator domain YIM_46200 PF00990 Diguanylate cyclase, GGDEF domain YIM_46200 PF00072 Response regulator receiver domain YIM_46210 PF00501 AMP-binding enzyme YIM_46210 PF01553 Acyltransferase YIM_46235 PF00892 EamA-like transporter family YIM_46245 PF00005 ABC transporter YIM_46250 PF00528 Binding-protein-dependent transport system inner membrane component YIM_46255 PF00528 Binding-protein-dependent transport system inner membrane component YIM_46260 PF12849 PBP superfamily domain YIM_46265 PF00583 Acetyltransferase (GNAT) family YIM_46270 PF00486 Transcriptional regulatory protein, C terminal YIM_46280 PF00085 Thioredoxin YIM_46290 PF00581 Rhodanese-like domain YIM_46295 PF07210 Protein of unknown function (DUF1416) YIM_46305 PF08768 Domain of unknown function (DUF1794) YIM_46310 PF02682 Carboxyltransferase domain, subdomain C and D YIM_46315 PF02626 Carboxyltransferase domain, subdomain A and B YIM_46325 PF01063 Amino-transferase class IV YIM_46355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YIM_46355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YIM_46365 PF00005 ABC transporter YIM_46400 PF01970 Tripartite tricarboxylate transporter TctA family YIM_46410 PF03401 Tripartite tricarboxylate transporter family receptor YIM_46415 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain YIM_46415 PF17203 Single cache domain 3 YIM_46415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_46415 PF00989 PAS fold YIM_46420 PF00072 Response regulator receiver domain YIM_46430 PF03462 PCRF domain YIM_46430 PF00472 RF-1 domain YIM_46435 PF02769 AIR synthase related protein, C-terminal domain YIM_46435 PF00586 AIR synthase related protein, N-terminal domain YIM_46440 PF00156 Phosphoribosyl transferase domain YIM_46475 PF01183 Glycosyl hydrolases family 25 YIM_46480 PF01183 Glycosyl hydrolases family 25 YIM_46505 PF00586 AIR synthase related protein, N-terminal domain YIM_46505 PF02769 AIR synthase related protein, C-terminal domain YIM_46505 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain YIM_46510 PF00664 ABC transporter transmembrane region YIM_46510 PF00005 ABC transporter YIM_46515 PF00005 ABC transporter YIM_46515 PF00664 ABC transporter transmembrane region YIM_46525 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase YIM_46535 PF00732 GMC oxidoreductase YIM_46535 PF05199 GMC oxidoreductase YIM_46540 PF00171 Aldehyde dehydrogenase family YIM_46565 PF01925 Sulfite exporter TauE/SafE YIM_46575 PF00005 ABC transporter YIM_46580 PF00528 Binding-protein-dependent transport system inner membrane component YIM_46585 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_46590 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_46595 PF10397 Adenylosuccinate lyase C-terminus YIM_46595 PF00206 Lyase YIM_46615 PF01212 Beta-eliminating lyase YIM_46640 PF00155 Aminotransferase class I and II YIM_46645 PF17964 Bacterial Ig domain YIM_46645 PF03734 L,D-transpeptidase catalytic domain YIM_46650 PF01464 Transglycosylase SLT domain YIM_46660 PF00069 Protein kinase domain YIM_46660 PF00400 WD domain, G-beta repeat YIM_46665 PF13360 PQQ-like domain YIM_46665 PF00069 Protein kinase domain YIM_46695 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YIM_46695 PF02844 Phosphoribosylglycinamide synthetase, N domain YIM_46695 PF02843 Phosphoribosylglycinamide synthetase, C domain YIM_46710 PF03009 Glycerophosphoryl diester phosphodiesterase family YIM_46715 PF07690 Major Facilitator Superfamily YIM_46725 PF00709 Adenylosuccinate synthetase YIM_46740 PF00440 Bacterial regulatory proteins, tetR family YIM_46740 PF17932 Tetracyclin repressor-like, C-terminal domain YIM_46760 PF01116 Fructose-bisphosphate aldolase class-II YIM_46765 PF13291 ACT domain YIM_46765 PF04607 Region found in RelA / SpoT proteins YIM_46765 PF02824 TGS domain YIM_46790 PF01979 Amidohydrolase family YIM_46800 PF09335 SNARE associated Golgi protein YIM_46805 PF02913 FAD linked oxidases, C-terminal domain YIM_46805 PF01565 FAD binding domain YIM_46820 PF07690 Major Facilitator Superfamily YIM_46835 PF07690 Major Facilitator Superfamily YIM_46840 PF04264 YceI-like domain YIM_46845 PF09335 SNARE associated Golgi protein YIM_46860 PF00392 Bacterial regulatory proteins, gntR family YIM_46860 PF07702 UTRA domain YIM_46880 PF00005 ABC transporter YIM_46885 PF02653 Branched-chain amino acid transport system / permease component YIM_46890 PF13407 Periplasmic binding protein domain YIM_46895 PF00356 Bacterial regulatory proteins, lacI family YIM_46900 PF00356 Bacterial regulatory proteins, lacI family YIM_46910 PF00384 Molybdopterin oxidoreductase YIM_46910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YIM_46910 PF01568 Molydopterin dinucleotide binding domain YIM_46915 PF08032 RNA 2'-O ribose methyltransferase substrate binding YIM_46915 PF00588 SpoU rRNA Methylase family YIM_46930 PF00156 Phosphoribosyl transferase domain YIM_46935 PF00106 short chain dehydrogenase YIM_46945 PF17871 AAA lid domain YIM_46945 PF02861 Clp amino terminal domain, pathogenicity island component YIM_46945 PF10431 C-terminal, D2-small domain, of ClpB protein YIM_46945 PF00004 ATPase family associated with various cellular activities (AAA) YIM_46945 PF07724 AAA domain (Cdc48 subfamily) YIM_46955 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_46955 PF00175 Oxidoreductase NAD-binding domain YIM_46955 PF00970 Oxidoreductase FAD-binding domain YIM_46960 PF00175 Oxidoreductase NAD-binding domain YIM_46960 PF00111 2Fe-2S iron-sulfur cluster binding domain YIM_46960 PF00970 Oxidoreductase FAD-binding domain YIM_46965 PF13411 MerR HTH family regulatory protein YIM_46970 PF00684 DnaJ central domain YIM_46970 PF01556 DnaJ C terminal domain YIM_46970 PF00226 DnaJ domain YIM_46975 PF01025 GrpE YIM_46980 PF00012 Hsp70 protein YIM_46985 PF00561 alpha/beta hydrolase fold YIM_47000 PF01161 Phosphatidylethanolamine-binding protein YIM_47015 PF00893 Small Multidrug Resistance protein YIM_47020 PF02754 Cysteine-rich domain YIM_47020 PF02665 Nitrate reductase gamma subunit YIM_47020 PF13183 4Fe-4S dicluster domain YIM_47025 PF02627 Carboxymuconolactone decarboxylase family YIM_47035 PF01037 Lrp/AsnC ligand binding domain YIM_47055 PF00440 Bacterial regulatory proteins, tetR family YIM_47055 PF17925 Tetracyclin repressor-like, C-terminal domain YIM_47060 PF18158 Adaptive response protein AidB N-terminal domain YIM_47060 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_47060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_47065 PF00378 Enoyl-CoA hydratase/isomerase YIM_47070 PF00188 Cysteine-rich secretory protein family YIM_47080 PF00692 dUTPase YIM_47115 PF04542 Sigma-70 region 2 YIM_47115 PF04545 Sigma-70, region 4 YIM_47120 PF00565 Staphylococcal nuclease homologue YIM_47120 PF02872 5'-nucleotidase, C-terminal domain YIM_47120 PF00746 LPXTG cell wall anchor motif YIM_47120 PF00149 Calcineurin-like phosphoesterase YIM_47125 PF12697 Alpha/beta hydrolase family YIM_47140 PF03167 Uracil DNA glycosylase superfamily YIM_47145 PF00072 Response regulator receiver domain YIM_47145 PF00196 Bacterial regulatory proteins, luxR family YIM_47150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YIM_47150 PF02770 Acyl-CoA dehydrogenase, middle domain YIM_47150 PF12806 Acetyl-CoA dehydrogenase C-terminal like YIM_47150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YIM_47175 PF00166 Chaperonin 10 Kd subunit YIM_47180 PF00578 AhpC/TSA family YIM_47195 PF00005 ABC transporter YIM_47200 PF00528 Binding-protein-dependent transport system inner membrane component YIM_47205 PF00497 Bacterial extracellular solute-binding proteins, family 3 YIM_47210 PF04174 A circularly permuted ATPgrasp YIM_47220 PF08379 Bacterial transglutaminase-like N-terminal region YIM_47220 PF01841 Transglutaminase-like superfamily YIM_47225 PF01546 Peptidase family M20/M25/M40 YIM_47230 PF07687 Peptidase dimerisation domain YIM_47230 PF01546 Peptidase family M20/M25/M40 YIM_47235 PF00676 Dehydrogenase E1 component YIM_47240 PF02779 Transketolase, pyrimidine binding domain YIM_47240 PF02780 Transketolase, C-terminal domain YIM_47245 PF00364 Biotin-requiring enzyme YIM_47245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YIM_47245 PF02817 e3 binding domain YIM_47250 PF13749 Putative ATP-dependent DNA helicase recG C-terminal YIM_47250 PF17191 RecG wedge domain YIM_47250 PF00270 DEAD/DEAH box helicase YIM_47260 PF00664 ABC transporter transmembrane region YIM_47260 PF00005 ABC transporter YIM_47270 PF04186 FxsA cytoplasmic membrane protein YIM_47285 PF00440 Bacterial regulatory proteins, tetR family YIM_47285 PF08359 YsiA-like protein, C-terminal region YIM_47290 PF01575 MaoC like domain YIM_47300 PF02803 Thiolase, C-terminal domain YIM_47300 PF00108 Thiolase, N-terminal domain YIM_47310 PF03009 Glycerophosphoryl diester phosphodiesterase family YIM_47315 PF17668 Acetyltransferase (GNAT) domain YIM_47315 PF13530 Sterol carrier protein domain YIM_47320 PF13411 MerR HTH family regulatory protein YIM_47320 PF07739 TipAS antibiotic-recognition domain YIM_47335 PF01047 MarR family YIM_47335 PF00583 Acetyltransferase (GNAT) family YIM_47355 PF00474 Sodium:solute symporter family YIM_47370 PF00561 alpha/beta hydrolase fold YIM_47395 PF00005 ABC transporter YIM_47400 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain YIM_47400 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain YIM_47430 PF01494 FAD binding domain YIM_47435 PF00350 Dynamin family YIM_47440 PF07730 Histidine kinase YIM_47445 PF00196 Bacterial regulatory proteins, luxR family YIM_47445 PF00072 Response regulator receiver domain YIM_47450 PF00005 ABC transporter YIM_47465 PF02390 Putative methyltransferase YIM_47475 PF00005 ABC transporter YIM_47485 PF00072 Response regulator receiver domain YIM_47485 PF00196 Bacterial regulatory proteins, luxR family YIM_47490 PF01979 Amidohydrolase family YIM_47505 PF00196 Bacterial regulatory proteins, luxR family YIM_47505 PF00072 Response regulator receiver domain YIM_47510 PF07730 Histidine kinase YIM_47520 PF00106 short chain dehydrogenase YIM_47525 PF07690 Major Facilitator Superfamily YIM_47535 PF00005 ABC transporter YIM_47535 PF13732 Domain of unknown function (DUF4162) YIM_47555 PF07690 Major Facilitator Superfamily YIM_47780 PF02223 Thymidylate kinase YIM_47785 PF04055 Radical SAM superfamily YIM_47785 PF01938 TRAM domain YIM_47785 PF00919 Uncharacterized protein family UPF0004 YIM_47815 PF07690 Major Facilitator Superfamily YIM_47820 PF13419 Haloacid dehalogenase-like hydrolase YIM_47830 PF03055 Retinal pigment epithelial membrane protein YIM_47850 PF01658 Myo-inositol-1-phosphate synthase YIM_47855 PF03551 Transcriptional regulator PadR-like family YIM_47860 PF17249 Family of unknown function (DUF5318) YIM_47865 PF00912 Transglycosylase YIM_47865 PF00905 Penicillin binding protein transpeptidase domain YIM_47870 PF01979 Amidohydrolase family YIM_47875 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YIM_47875 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YIM_47880 PF00480 ROK family YIM_47880 PF01325 Iron dependent repressor, N-terminal DNA binding domain YIM_47895 PF01261 Xylose isomerase-like TIM barrel YIM_47915 PF01250 Ribosomal protein S6 YIM_47920 PF00436 Single-strand binding protein family YIM_47925 PF01084 Ribosomal protein S18 YIM_47930 PF03948 Ribosomal protein L9, C-terminal domain YIM_47930 PF01281 Ribosomal protein L9, N-terminal domain YIM_47955 PF03796 DnaB-like helicase C terminal domain YIM_47955 PF14528 LAGLIDADG-like domain YIM_47955 PF00772 DnaB-like helicase N terminal domain YIM_47955 PF03796 DnaB-like helicase C terminal domain YIM_47955 PF00772 DnaB-like helicase N terminal domain YIM_47955 PF14528 LAGLIDADG-like domain YIM_47960 PF01494 FAD binding domain YIM_47970 PF00561 alpha/beta hydrolase fold YIM_47980 PF00144 Beta-lactamase YIM_47990 PF00561 alpha/beta hydrolase fold YIM_48015 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YIM_48030 PF01594 AI-2E family transporter YIM_48040 PF00196 Bacterial regulatory proteins, luxR family YIM_48040 PF00072 Response regulator receiver domain YIM_48055 PF02896 PEP-utilising enzyme, TIM barrel domain YIM_48055 PF00391 PEP-utilising enzyme, mobile domain YIM_48055 PF05524 PEP-utilising enzyme, N-terminal YIM_48065 PF00294 pfkB family carbohydrate kinase YIM_48080 PF13305 Tetracyclin repressor-like, C-terminal domain YIM_48080 PF00440 Bacterial regulatory proteins, tetR family YIM_48095 PF08264 Anticodon-binding domain of tRNA YIM_48095 PF09334 tRNA synthetases class I (M) YIM_48095 PF13603 Leucyl-tRNA synthetase, Domain 2 YIM_48110 PF02622 Uncharacterized ACR, COG1678 YIM_48115 PF07690 Major Facilitator Superfamily YIM_48170 PF13492 GAF domain YIM_48170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YIM_48170 PF07730 Histidine kinase YIM_48175 PF13735 tRNA nucleotidyltransferase domain 2 putative YIM_48175 PF12627 Probable RNA and SrmB- binding site of polymerase A YIM_48175 PF01743 Poly A polymerase head domain YIM_48180 PF00293 NUDIX domain YIM_48195 PF00528 Binding-protein-dependent transport system inner membrane component YIM_48200 PF00528 Binding-protein-dependent transport system inner membrane component YIM_48205 PF03023 Lipid II flippase MurJ YIM_48215 PF04542 Sigma-70 region 2 YIM_48215 PF08281 Sigma-70, region 4 YIM_48225 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_48230 PF00085 Thioredoxin YIM_48230 PF07992 Pyridine nucleotide-disulphide oxidoreductase YIM_48235 PF01520 N-acetylmuramoyl-L-alanine amidase YIM_48235 PF01471 Putative peptidoglycan binding domain YIM_48245 PF00155 Aminotransferase class I and II YIM_48250 PF07478 D-ala D-ala ligase C-terminus YIM_48250 PF01820 D-ala D-ala ligase N-terminus YIM_48255 PF17762 HTH domain found in ParB protein YIM_48255 PF02195 ParB-like nuclease domain YIM_48260 PF13614 AAA domain YIM_48265 PF02527 rRNA small subunit methyltransferase G YIM_48270 PF13350 Tyrosine phosphatase family YIM_48285 PF02096 60Kd inner membrane protein YIM_48290 PF00468 Ribosomal protein L34